Citrus Sinensis ID: 010234
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 514 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XES1 | 1061 | Calcium-transporting ATPa | yes | no | 1.0 | 0.484 | 0.821 | 0.0 | |
| P92939 | 1061 | Calcium-transporting ATPa | yes | no | 1.0 | 0.484 | 0.819 | 0.0 | |
| O23087 | 1054 | Calcium-transporting ATPa | no | no | 0.963 | 0.469 | 0.726 | 0.0 | |
| Q42883 | 1048 | Calcium-transporting ATPa | N/A | no | 0.978 | 0.479 | 0.708 | 0.0 | |
| Q08853 | 1228 | Calcium-transporting ATPa | N/A | no | 0.914 | 0.382 | 0.519 | 1e-143 | |
| Q7PPA5 | 1018 | Calcium-transporting ATPa | yes | no | 0.881 | 0.444 | 0.530 | 1e-136 | |
| P70083 | 996 | Sarcoplasmic/endoplasmic | N/A | no | 0.877 | 0.452 | 0.526 | 1e-134 | |
| Q292Q0 | 1002 | Calcium-transporting ATPa | yes | no | 0.881 | 0.452 | 0.546 | 1e-133 | |
| P22700 | 1020 | Calcium-transporting ATPa | yes | no | 0.881 | 0.444 | 0.534 | 1e-132 | |
| P13585 | 994 | Sarcoplasmic/endoplasmic | yes | no | 0.881 | 0.455 | 0.540 | 1e-130 |
| >sp|Q9XES1|ECA4_ARATH Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/515 (82%), Positives = 465/515 (90%), Gaps = 1/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS LD SR+LIL +LH+MS ALRCLGFAY D DF TYDG+EDHPAH L
Sbjct: 547 IQLLDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQL 606
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNPSNY+S+E L FVG VGLRDPPR EV QAI DCR AGIRVMVITGDNK+TAEAICRE
Sbjct: 607 LNPSNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICRE 666
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVFE +EDIS +SLTGKEFM++ D+K HLRQ+GGLLFSRAEP+HKQEIVRLLKEDGEVV
Sbjct: 667 IGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVV 726
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIG+AMGI+GTEVAKEASD+VLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 727 AMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGEGRSIYNNM 786
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEG+IPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 787 KAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIM 846
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+AWILFRY+VIGLYVG+ATVGVFIIWYTH SF+GI+L DGHSLV+YS
Sbjct: 847 KKPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHNSFMGIDLSQDGHSLVSYS 906
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL +WGQC SW F VSPFTAG+Q F+F+ NPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 907 QLAHWGQCSSWEGFKVSPFTAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSL+TMPPWVNPWLLLAM+VSFGLHF+ILYVPFLAQ+FGIVPLS NEWLLVLA+
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTS-RRKSSKPKSE 514
+ PV+LIDEVLKFVGRCT+G + S R S+K K E
Sbjct: 1027 SLPVILIDEVLKFVGRCTSGYRYSPRTPSAKQKEE 1061
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|P92939|ECA1_ARATH Calcium-transporting ATPase 1, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/515 (81%), Positives = 463/515 (89%), Gaps = 1/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS LD SR+LIL +L +MS ALRCLGFAY D DF TYDG+EDHPAH L
Sbjct: 547 IQLLDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQL 606
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNPSNY+S+E L FVG VGLRDPPR EV QAI DCR AGIRVMVITGDNK+TAEAICRE
Sbjct: 607 LNPSNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICRE 666
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVFE +EDIS +SLTG EFM++ D+K HLRQ+GGLLFSRAEP+HKQEIVRLLKEDGEVV
Sbjct: 667 IGVFEADEDISSRSLTGIEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVV 726
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIG+AMGI+GTEVAKEASDMVLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 727 AMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNM 786
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEG+IPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 787 KAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIM 846
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+AWILFRY+VIGLYVG+ATVGVFIIWYTH SF+GI+L DGHSLV+YS
Sbjct: 847 KKPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHSSFMGIDLSQDGHSLVSYS 906
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL +WGQC SW F VSPFTAG+Q F+F+ NPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 907 QLAHWGQCSSWEGFKVSPFTAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSL+TMPPWVNPWLLLAM+VSFGLHF+ILYVPFLAQ+FGIVPLS NEWLLVLA+
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTSRRK-SSKPKSE 514
+ PV+LIDEVLKFVGRCT+G + S R S+K K E
Sbjct: 1027 SLPVILIDEVLKFVGRCTSGYRYSPRTLSTKQKEE 1061
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the endoplasmic reticulum lumen. Also regulate manganese ion homeostasis by pumping it into endomembrane compartments. Can also transport zinc. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O23087|ECA2_ARATH Calcium-transporting ATPase 2, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/501 (72%), Positives = 419/501 (83%), Gaps = 6/501 (1%)
Query: 2 QLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLL 61
QL DGS+V LD SR +IL EM++ LRCLG AYKDEL +F Y +E+HP+H LL
Sbjct: 543 QLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDY-SSEEHPSHKKLL 601
Query: 62 NPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI 121
+PS+Y+++E L FVG+VGLRDPPR EV +AIEDCR AGIRVMVITGDNK+TAEAIC EI
Sbjct: 602 DPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICCEI 661
Query: 122 GVFECNEDISLKSLTGKEFMEM--HDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEV 179
+F NED+S S TGKEFM + + L +SGG +FSRAEPRHKQEIVR+LKE GE+
Sbjct: 662 RLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMGEI 721
Query: 180 VAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNN 239
VAMTGDGVNDAPALKLADIGIAMGI GTEVAKEASDMVLADD+FSTIVSAV EGRSIYNN
Sbjct: 722 VAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNN 781
Query: 240 MKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDI 299
MKAFIRYMISSN+GEV SIF TAALGIPE +IPVQLLWVNLVTDGPPATALGFNP D DI
Sbjct: 782 MKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADIDI 841
Query: 300 MKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTY 359
MKKPPR+SDD LI +W+L RYLVIG YVG+ATVG+F++WYT SFLGI+LI DGH+LV++
Sbjct: 842 MKKPPRKSDDCLIDSWVLIRYLVIGSYVGVATVGIFVLWYTQASFLGISLISDGHTLVSF 901
Query: 360 SQLTNWGQCPSWG-NFTVSPFT--AGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEM 416
+QL NW +C SWG NFT +P+T G + F +NPCDYF GKVK MTLSL+VLVAIEM
Sbjct: 902 TQLQNWSECSSWGTNFTATPYTVAGGLRTIAFENNPCDYFTLGKVKPMTLSLTVLVAIEM 961
Query: 417 FNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLL 476
FNSLNALSED SLLTMPPW NPWLL+AM+VSF LH +ILYVPFLA +FGIVPLSF EW +
Sbjct: 962 FNSLNALSEDNSLLTMPPWRNPWLLVAMTVSFALHCVILYVPFLANVFGIVPLSFREWFV 1021
Query: 477 VLAIAFPVVLIDEVLKFVGRC 497
V+ ++FPV+LIDE LKF+GRC
Sbjct: 1022 VILVSFPVILIDEALKFIGRC 1042
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q42883|ECAP_SOLLC Calcium-transporting ATPase, endoplasmic reticulum-type OS=Solanum lycopersicum GN=LCA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/515 (70%), Positives = 420/515 (81%), Gaps = 12/515 (2%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QL DGS VPLD R L+L EMS+ LRCLG AYKD+L + Y HPAH L
Sbjct: 543 VQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYA-ATHPAHKKL 601
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
L+PS Y+S+E L FVG+VGLRDPPR EVH+A+ DCR AGI++MVITGDNK+TAEA+CRE
Sbjct: 602 LDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCRE 661
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAH--LRQSGGLLFSRAEPRHKQEIVRLLKEDGE 178
I +F E++ S TGKEFM ++ L Q GG +FSRAEPRHKQEIVR+LKE GE
Sbjct: 662 IQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMGE 721
Query: 179 VVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYN 238
+VAMTGDGVNDAPALKLADIGIAMGI GTEVAKEASDMVLADD+FSTIVSAV EGRSIYN
Sbjct: 722 IVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYN 781
Query: 239 NMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKD 298
NMKAFIRYMISSN+GEV SIF TA LGIPE LIPVQLLWVNLVTDGPPATALGFNP D D
Sbjct: 782 NMKAFIRYMISSNVGEVISIFLTAVLGIPECLIPVQLLWVNLVTDGPPATALGFNPADVD 841
Query: 299 IMKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVT 358
IM+KPPR++ D+LI++W+ FRY+VIG YVGIATVG+FI+WYT SFLGIN++ DGH+LV
Sbjct: 842 IMQKPPRKNTDALINSWVFFRYMVIGSYVGIATVGIFIVWYTQASFLGINIVSDGHTLVE 901
Query: 359 YSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFN 418
SQL NWG+C +W NFTVSPF AGN++ TF+D PC+YF GKVKAMTLSLSVLVAIEMFN
Sbjct: 902 LSQLRNWGECSTWTNFTVSPFKAGNRLITFSD-PCEYFTVGKVKAMTLSLSVLVAIEMFN 960
Query: 419 SLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVL 478
SLNALSED SL+ MPPW NPWLL+AMS+SF LH +ILYVPFLA IFGIVPLS EWLLV+
Sbjct: 961 SLNALSEDNSLIKMPPWRNPWLLVAMSLSFALHSVILYVPFLADIFGIVPLSLYEWLLVI 1020
Query: 479 AIAFPVVLIDEVLKFVGRCTNGSQTSRRKSSKPKS 513
++ PV+LIDEVLKFVGR RR+ +K K+
Sbjct: 1021 LLSAPVILIDEVLKFVGR--------RRRRTKLKA 1047
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q08853|ATC_PLAFK Calcium-transporting ATPase OS=Plasmodium falciparum (isolate K1 / Thailand) GN=ATP6 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/508 (51%), Positives = 341/508 (67%), Gaps = 38/508 (7%)
Query: 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLN 62
L + PL+ +N I + + M ALR L FAYK + D N + N
Sbjct: 730 LTKNDIRPLNETLKNEIHNKIQNMGKRALRTLSFAYKK----LSSKDLN--------IKN 777
Query: 63 PSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG 122
+Y +E L ++G +G+ DPPR V +AI C AGIRV +ITGDN NTA AI +EI
Sbjct: 778 TDDYYKLEQDLIYLGGLGIIDPPRKYVGRAIRLCHMAGIRVFMITGDNINTARAIAKEIN 837
Query: 123 VFECNE------------DISLKSLTGKEFMEMH-DKKAH-LRQSGGLLFSRAEPRHKQE 168
+ NE + + G+EF + +K+ H L+ + ++F R EP+HK++
Sbjct: 838 ILNKNEGDDEKDNYTNNKNTQICCYNGREFEDFSLEKQKHILKNTPRIVFCRTEPKHKKQ 897
Query: 169 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVS 228
IV++LK+ GE VAMTGDGVNDAPALK ADIGIAMGI GTEVAKEASD+VLADD+F+TIV
Sbjct: 898 IVKVLKDLGETVAMTGDGVNDAPALKSADIGIAMGINGTEVAKEASDIVLADDNFNTIVE 957
Query: 229 AVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPAT 288
A+ EGR IYNNMKAFIRY+ISSNIGEVASIF TA LGIP+ L PVQLLWVNLVTDG PAT
Sbjct: 958 AIKEGRCIYNNMKAFIRYLISSNIGEVASIFITALLGIPDSLAPVQLLWVNLVTDGLPAT 1017
Query: 289 ALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGIN 348
ALGFNPP+ D+MK PR +D+LI+ L RY++IG YVGIATV +F+ W+
Sbjct: 1018 ALGFNPPEHDVMKCKPRHKNDNLINGLTLLRYIIIGTYVGIATVSIFVYWFLFYP----- 1072
Query: 349 LIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSL 408
D H+L+ + QL+++ QC +W NF V N+V+ +++ C YF GK+KA TLSL
Sbjct: 1073 -DSDMHTLINFYQLSHYNQCKAWNNFRV------NKVYDMSEDHCSYFSAGKIKASTLSL 1125
Query: 409 SVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVP 468
SVLV IEMFN+LNALSE SL +PPW N +L+LA S LH LILY+P LA+IFG+VP
Sbjct: 1126 SVLVLIEMFNALNALSEYNSLFEIPPWRNMYLVLATIGSLLLHVLILYIPPLARIFGVVP 1185
Query: 469 LSFNEWLLVLAIAFPVVLIDEVLKFVGR 496
LS +W LV +FPV+++DE++KF +
Sbjct: 1186 LSAYDWFLVFLWSFPVIILDEIIKFYAK 1213
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Plasmodium falciparum (isolate K1 / Thailand) (taxid: 5839) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q7PPA5|ATC1_ANOGA Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Anopheles gambiae GN=Ca-P60A PE=2 SV=5 | Back alignment and function description |
|---|
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/490 (53%), Positives = 321/490 (65%), Gaps = 37/490 (7%)
Query: 9 VPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
VPL + ILD TG LRCL A D + D N+ + +
Sbjct: 534 VPLTQTLKQRILDLTRTYGTGRDTLRCLALATADSPMKPDDMDLNDS----------TKF 583
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
+ E LTFVG+VG+ DPPR EV +I CRAAGIRV+VITGDNK TAEAICR IGVF
Sbjct: 584 YTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFGE 643
Query: 127 NEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 186
+ED + KS +G+EF ++ + S LFSR EP HK +IV L+ E+ AMTGDG
Sbjct: 644 DEDTTGKSYSGREFDDLSVSEQREACSRARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 703
Query: 187 VNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRY 246
VNDAPALK A+IGIAMG +GT VAK A++MVLADD+FS+IV+AV EGR+IYNNMK FIRY
Sbjct: 704 VNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRY 762
Query: 247 MISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRR 306
+ISSNIGEV SIF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM KPPR+
Sbjct: 763 LISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMTKPPRK 822
Query: 307 SDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWG 366
+D+ LIS W+ FRY+ IG YVG ATVG W+ + + ++Y QLT+
Sbjct: 823 ADEGLISGWLFFRYMAIGGYVGCATVGGAAWWF---------MFSETGPQLSYWQLTHHL 873
Query: 367 QCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSED 426
C G F C F+ MT++LSVLV IEM N++N+LSE+
Sbjct: 874 SCLGGGE-------------EFKGIDCKIFNDP--HPMTMALSVLVTIEMLNAMNSLSEN 918
Query: 427 GSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVL 486
SL+ MPPW N WL+ +M +SF LHF+ILYV L+ +F + PL NEW+ V+ + PVVL
Sbjct: 919 QSLVQMPPWCNIWLIASMCLSFALHFVILYVDVLSTVFQVTPLDGNEWMTVMKFSLPVVL 978
Query: 487 IDEVLKFVGR 496
+DE+LKFV R
Sbjct: 979 LDEILKFVAR 988
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Anopheles gambiae (taxid: 7165) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P70083|AT2A1_MAKNI Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Makaira nigricans GN=atp2a1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/492 (52%), Positives = 330/492 (67%), Gaps = 41/492 (8%)
Query: 9 VPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
VPL + I+ + + TG LRCL A +D E + L + + +
Sbjct: 532 VPLTSAIKEKIMAVIRDWGTGRDTLRCLALATRDTPLKVEEMN----------LEDSTKF 581
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
A E +TFVG VG+ DPPR EV +IE CR AGIRV++ITGDNK TA AICR IG+F+
Sbjct: 582 ADYETDMTFVGCVGMLDPPRKEVTGSIELCRDAGIRVIMITGDNKGTAIAICRRIGIFKE 641
Query: 127 NEDISLKSLTGKEFMEM--HDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 184
+ED+S K+ TG+EF ++ D+ +R++ F+R EP HK +IV L+ + ++ AMTG
Sbjct: 642 DEDVSNKAYTGREFDDLPSQDQAEAVRRA--CCFARVEPSHKSKIVEFLQGNDDITAMTG 699
Query: 185 DGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFI 244
DGVNDAPALK A+IGIAMG +GT VAK AS+MVLADD+FS+IV+AV EGR+IYNNMK FI
Sbjct: 700 DGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFI 758
Query: 245 RYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPP 304
RY+ISSN+GEV IF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM KPP
Sbjct: 759 RYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPP 818
Query: 305 RRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTN 364
R + LIS W+ FRY+ IG YVG ATVG W+ + S VTY QL++
Sbjct: 819 RSPKEPLISGWLFFRYMAIGGYVGAATVGGAAWWFLYDS---------TGPAVTYYQLSH 869
Query: 365 WGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALS 424
+ QC + N+ FT D CD F MT++LSVLV IEM N+LN+LS
Sbjct: 870 FMQCHN-----------HNEDFTGVD--CDIFEAS--PPMTMALSVLVTIEMCNALNSLS 914
Query: 425 EDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPV 484
E+ SL+ MPPW N WL+ AM++S LHF+I+YV L IF + L+F++WL+V ++FPV
Sbjct: 915 ENQSLIRMPPWSNLWLMAAMTLSMSLHFMIIYVDPLPMIFKLTHLTFDQWLMVFKLSFPV 974
Query: 485 VLIDEVLKFVGR 496
+LIDEVLKF R
Sbjct: 975 ILIDEVLKFFAR 986
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Makaira nigricans (taxid: 13604) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q292Q0|ATC1_DROPS Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila pseudoobscura pseudoobscura GN=Ca-P60A PE=3 SV=2 | Back alignment and function description |
|---|
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/494 (54%), Positives = 330/494 (66%), Gaps = 41/494 (8%)
Query: 7 SVVPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPS 64
S VPL + IL + TG LRCL A D + P L + +
Sbjct: 533 SKVPLTSALKAKILALTGQYGTGRDTLRCLALAVAD----------SPIRPEDMDLGDST 582
Query: 65 NYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124
+ E LTFVG+VG+ DPPR EV AI CRAAGIRV+VITGDNK TAEAICR IGVF
Sbjct: 583 KFYQYEVNLTFVGVVGMLDPPRKEVFDAIVRCRAAGIRVIVITGDNKATAEAICRRIGVF 642
Query: 125 ECNEDISLKSLTGKEF--MEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAM 182
ED + KS +G+EF + + ++KA + +S LFSR EP+HK +IV L+ E+ AM
Sbjct: 643 TEEEDTTGKSYSGREFDDLSIAEQKAAVARS--RLFSRVEPQHKSKIVEYLQGMNEISAM 700
Query: 183 TGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKA 242
TGDGVNDAPALK A+IGIAMG +GT VAK A++MVLADD+FS+IVSAV EGR+IYNNMK
Sbjct: 701 TGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQ 759
Query: 243 FIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKK 302
FIRY+ISSNIGEV SIF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM K
Sbjct: 760 FIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDK 819
Query: 303 PPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQL 362
PPR++D+ LIS W+ FRY+ IG YVG ATVG W+ S +G L TY QL
Sbjct: 820 PPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFIASS--------EGPGL-TYWQL 870
Query: 363 TNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNA 422
T+ C G+ F C F KAMT++LSVLV IEM N++N+
Sbjct: 871 THHLSCLGGGD-------------EFKGVDCKIF--SDPKAMTMALSVLVTIEMLNAMNS 915
Query: 423 LSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAF 482
LSE+ SL++MPPW N WL+ +M++SF LHF+ILYV L+ +F + PLS EW+ V+ +
Sbjct: 916 LSENQSLISMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSI 975
Query: 483 PVVLIDEVLKFVGR 496
PVVL+DE LKFV R
Sbjct: 976 PVVLLDETLKFVAR 989
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Drosophila pseudoobscura pseudoobscura (taxid: 46245) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila melanogaster GN=Ca-P60A PE=1 SV=2 | Back alignment and function description |
|---|
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/490 (53%), Positives = 324/490 (66%), Gaps = 37/490 (7%)
Query: 9 VPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
VPL + IL + TG LRCL A D + P L + + +
Sbjct: 535 VPLTSALKAKILALTGQYGTGRDTLRCLALAVAD----------SPMKPDEMDLGDSTKF 584
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
E LTFVG+VG+ DPPR EV +I CRAAGIRV+VITGDNK TAEAICR IGVF
Sbjct: 585 YQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAE 644
Query: 127 NEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 186
+ED + KS +G+EF ++ + + LFSR EP+HK +IV L+ E+ AMTGDG
Sbjct: 645 DEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDG 704
Query: 187 VNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRY 246
VNDAPALK A+IGIAMG +GT VAK A++MVLADD+FS+IVSAV EGR+IYNNMK FIRY
Sbjct: 705 VNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRY 763
Query: 247 MISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRR 306
+ISSNIGEV SIF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM+KPPR+
Sbjct: 764 LISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRK 823
Query: 307 SDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWG 366
+D+ LIS W+ FRY+ IG YVG ATVG W+ + D ++Y QLT+
Sbjct: 824 ADEGLISGWLFFRYMAIGFYVGAATVGAAAWWF---------VFSDEGPKLSYWQLTHHL 874
Query: 367 QCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSED 426
C G+ F C F AMT++LSVLV IEM N++N+LSE+
Sbjct: 875 SCLGGGD-------------EFKGVDCKIF--SDPHAMTMALSVLVTIEMLNAMNSLSEN 919
Query: 427 GSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVL 486
SL+TMPPW N WL+ +M++SF LHF+ILYV L+ +F + PLS EW+ V+ + PVVL
Sbjct: 920 QSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEEWITVMKFSIPVVL 979
Query: 487 IDEVLKFVGR 496
+DE LKFV R
Sbjct: 980 LDETLKFVAR 989
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P13585|AT2A1_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Gallus gallus GN=ATP2A1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 265/490 (54%), Positives = 321/490 (65%), Gaps = 37/490 (7%)
Query: 9 VPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
VPL + IL + E TG LRCL A +D P E +L++ + +
Sbjct: 535 VPLTPAVKEKILAVIKEWGTGRDTLRCLALATRDTPPKME----------DMMLVDSTKF 584
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
A E LTFVG VG+ DPPR EV +I CR AGIRV++ITGDNK TA AICR IG+F
Sbjct: 585 AEYETDLTFVGCVGMLDPPRKEVMGSIRLCRDAGIRVIMITGDNKGTAIAICRRIGIFTE 644
Query: 127 NEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 186
+E++S ++ TG+EF ++ + F+R EP HK +IV L+ E+ AMTGDG
Sbjct: 645 DEEVSGRAYTGREFDDLPPAEQREACRRACCFARVEPTHKSKIVEFLQSFDEITAMTGDG 704
Query: 187 VNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRY 246
VNDAPALK A+IGIAMG +GT VAK AS+MVLADD+FSTIV+AV EGR+IYNNMK FIRY
Sbjct: 705 VNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRY 763
Query: 247 MISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRR 306
+ISSN+GEV IF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM KPPR
Sbjct: 764 LISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRS 823
Query: 307 SDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWG 366
+ LIS W+ FRYL IG YVG ATVG W+ + DG SL TY QLT++
Sbjct: 824 PKEPLISGWLFFRYLAIGGYVGAATVGAAAWWFLYAE--------DGPSL-TYHQLTHFM 874
Query: 367 QCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSED 426
QC T N F D CD F MT++LSVLV IEM N+LN+LSE+
Sbjct: 875 QC-----------THHNAEFEGVD--CDIFESP--VPMTMALSVLVTIEMCNALNSLSEN 919
Query: 427 GSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVL 486
SLL MPPWVN WL+ ++ +S LHF+ILYV L IF + L WL+VL I+FPV+L
Sbjct: 920 QSLLRMPPWVNIWLVGSICLSMSLHFVILYVDPLPMIFKLTHLDLAHWLVVLRISFPVIL 979
Query: 487 IDEVLKFVGR 496
+DE LKFV R
Sbjct: 980 LDEALKFVAR 989
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 514 | ||||||
| 225439821 | 1063 | PREDICTED: calcium-transporting ATPase 4 | 1.0 | 0.483 | 0.885 | 0.0 | |
| 343915319 | 1081 | TPA_exp: type IIA calcium ATPase [Medica | 0.992 | 0.471 | 0.856 | 0.0 | |
| 357510473 | 540 | Endoplasmic reticulum-type calcium-trans | 0.992 | 0.944 | 0.856 | 0.0 | |
| 147858184 | 1061 | hypothetical protein VITISV_034639 [Viti | 1.0 | 0.484 | 0.844 | 0.0 | |
| 225435122 | 1061 | PREDICTED: calcium-transporting ATPase 4 | 1.0 | 0.484 | 0.844 | 0.0 | |
| 224120994 | 1024 | endoplasmic reticulum [ER]-type calcium | 0.980 | 0.492 | 0.849 | 0.0 | |
| 297849064 | 1056 | endoplasmic reticulum-type calcium-trans | 1.0 | 0.486 | 0.819 | 0.0 | |
| 186478235 | 1061 | Ca2+-transporting ATPase [Arabidopsis th | 1.0 | 0.484 | 0.821 | 0.0 | |
| 343172386 | 1018 | Ca2+-transporting ATPase, partial [Silen | 0.998 | 0.503 | 0.821 | 0.0 | |
| 116248597 | 1061 | endomembrane Ca2+ ATPase 4 [Arabidopsis | 1.0 | 0.484 | 0.819 | 0.0 |
| >gi|225439821|ref|XP_002277306.1| PREDICTED: calcium-transporting ATPase 4, endoplasmic reticulum-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/515 (88%), Positives = 483/515 (93%), Gaps = 1/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGSVV L SR+LIL+ALHEMS+GALRCLGFAYKDELPDF TYDG+E+HPAH LL
Sbjct: 549 VQLLDGSVVELGDNSRSLILEALHEMSSGALRCLGFAYKDELPDFATYDGDENHPAHGLL 608
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNP+NY+S+E LTFVGLVGLRDPPR EVHQAIEDCRAAGIRVMVITGDNKNTAEAIC E
Sbjct: 609 LNPANYSSIERNLTFVGLVGLRDPPRAEVHQAIEDCRAAGIRVMVITGDNKNTAEAICHE 668
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVF NEDI KSLTGKEFME+ D+KAHLRQ+GGLLFSRAEPRHKQEIVRLLKEDGEVV
Sbjct: 669 IGVFGPNEDIRSKSLTGKEFMELRDQKAHLRQNGGLLFSRAEPRHKQEIVRLLKEDGEVV 728
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 729 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNM 788
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPD+DIM
Sbjct: 789 KAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDRDIM 848
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVF+IWYTH SFLGI+L GDGH+LVTY+
Sbjct: 849 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFVIWYTHSSFLGIDLSGDGHTLVTYT 908
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL +WGQC SW NFT+SPFTAG QVFTFNDNPCDYF GGKVKA TLSLSVLVAIEMFNSL
Sbjct: 909 QLADWGQCSSWENFTISPFTAGAQVFTFNDNPCDYFQGGKVKATTLSLSVLVAIEMFNSL 968
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSLL MPPWVNPWLL+AMSVSFGLHFLILYVP LAQ+FGIVPLS NEWLLVLA+
Sbjct: 969 NALSEDGSLLVMPPWVNPWLLVAMSVSFGLHFLILYVPVLAQVFGIVPLSLNEWLLVLAV 1028
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTSR-RKSSKPKSE 514
AFPV+LIDE+LK VGRCT+G QTS RKS KPKSE
Sbjct: 1029 AFPVILIDEILKLVGRCTSGFQTSSTRKSLKPKSE 1063
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|343915319|tpg|DAA34949.1| TPA_exp: type IIA calcium ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/514 (85%), Positives = 480/514 (93%), Gaps = 4/514 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QL DGSVV LD+ ++NLIL ALHEMST ALRCLGFAYKDEL +FE Y+GNEDHPAH LL
Sbjct: 572 VQLRDGSVVKLDNNAKNLILQALHEMSTSALRCLGFAYKDELTNFENYNGNEDHPAHQLL 631
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
L+P+NY+S+E L FVGLVGLRDPPR EV+QAIEDCRAAGIRVMVITGDNKNTAEAICRE
Sbjct: 632 LDPNNYSSIEDELIFVGLVGLRDPPREEVYQAIEDCRAAGIRVMVITGDNKNTAEAICRE 691
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVF NE+IS KSLTGK+FME+ DKKA+LRQ+GGLLFSRAEPRHKQ+IVRLLKEDGEVV
Sbjct: 692 IGVFAPNENISSKSLTGKDFMELRDKKAYLRQTGGLLFSRAEPRHKQDIVRLLKEDGEVV 751
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD+FS+IV+AVGEGRSIYNNM
Sbjct: 752 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNM 811
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 812 KAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 871
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+ WILFRYLVIG+YVG+ATVGVFIIWYTHGSF+GI+L DGH+LVTYS
Sbjct: 872 KKPPRRSDDSLINLWILFRYLVIGIYVGLATVGVFIIWYTHGSFMGIDLSSDGHTLVTYS 931
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL NWGQC SW NFT +PFTAG+++ +F+ +PCDYF GKVKAMTLSLSVLVAIEMFNSL
Sbjct: 932 QLANWGQCSSWNNFTAAPFTAGSRIISFDADPCDYFTTGKVKAMTLSLSVLVAIEMFNSL 991
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLA++FGIVPLSFNEWLLVLA+
Sbjct: 992 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAKVFGIVPLSFNEWLLVLAV 1051
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTSRRKSSKPKSE 514
A PV+LIDEVLKFVGRCT+GS +RR SK KS+
Sbjct: 1052 ALPVILIDEVLKFVGRCTSGS--ARR--SKQKSD 1081
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357510473|ref|XP_003625525.1| Endoplasmic reticulum-type calcium-transporting ATPase [Medicago truncatula] gi|355500540|gb|AES81743.1| Endoplasmic reticulum-type calcium-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/514 (85%), Positives = 480/514 (93%), Gaps = 4/514 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QL DGSVV LD+ ++NLIL ALHEMST ALRCLGFAYKDEL +FE Y+GNEDHPAH LL
Sbjct: 31 VQLRDGSVVKLDNNAKNLILQALHEMSTSALRCLGFAYKDELTNFENYNGNEDHPAHQLL 90
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
L+P+NY+S+E L FVGLVGLRDPPR EV+QAIEDCRAAGIRVMVITGDNKNTAEAICRE
Sbjct: 91 LDPNNYSSIEDELIFVGLVGLRDPPREEVYQAIEDCRAAGIRVMVITGDNKNTAEAICRE 150
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVF NE+IS KSLTGK+FME+ DKKA+LRQ+GGLLFSRAEPRHKQ+IVRLLKEDGEVV
Sbjct: 151 IGVFAPNENISSKSLTGKDFMELRDKKAYLRQTGGLLFSRAEPRHKQDIVRLLKEDGEVV 210
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD+FS+IV+AVGEGRSIYNNM
Sbjct: 211 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNM 270
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 271 KAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 330
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+ WILFRYLVIG+YVG+ATVGVFIIWYTHGSF+GI+L DGH+LVTYS
Sbjct: 331 KKPPRRSDDSLINLWILFRYLVIGIYVGLATVGVFIIWYTHGSFMGIDLSSDGHTLVTYS 390
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL NWGQC SW NFT +PFTAG+++ +F+ +PCDYF GKVKAMTLSLSVLVAIEMFNSL
Sbjct: 391 QLANWGQCSSWNNFTAAPFTAGSRIISFDADPCDYFTTGKVKAMTLSLSVLVAIEMFNSL 450
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLA++FGIVPLSFNEWLLVLA+
Sbjct: 451 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAKVFGIVPLSFNEWLLVLAV 510
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTSRRKSSKPKSE 514
A PV+LIDEVLKFVGRCT+GS +RR SK KS+
Sbjct: 511 ALPVILIDEVLKFVGRCTSGS--ARR--SKQKSD 540
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147858184|emb|CAN79679.1| hypothetical protein VITISV_034639 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/515 (84%), Positives = 474/515 (92%), Gaps = 1/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS+V LD KSR+LIL +L++MST ALRCLGFAYK++L +F TY+G+EDHPAH LL
Sbjct: 547 IQLLDGSIVELDRKSRDLILQSLYQMSTSALRCLGFAYKEDLLEFATYNGDEDHPAHQLL 606
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
L PSNY+ +E L FVGLVGLRDPPR EV QAIEDCRAAGIRVMVITGDNKNTAEAICRE
Sbjct: 607 LRPSNYSVIESKLIFVGLVGLRDPPRKEVRQAIEDCRAAGIRVMVITGDNKNTAEAICRE 666
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVF EDISLKS+TGKEFME +D+K HLRQ+GGLLFSRAEPRHKQEIVRLLKED EVV
Sbjct: 667 IGVFGSKEDISLKSITGKEFMEHYDQKTHLRQNGGLLFSRAEPRHKQEIVRLLKEDNEVV 726
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIGIAMGI GTEVAKEASDMVLADD+F+TIV+AVGEGRSIYNNM
Sbjct: 727 AMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFNTIVAAVGEGRSIYNNM 786
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 787 KAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 846
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+ WILFRYLVIGLYVGIATVG+FIIWYTHG+FLGI+L GDGHSLVTYS
Sbjct: 847 KKPPRRSDDSLITPWILFRYLVIGLYVGIATVGIFIIWYTHGTFLGIDLSGDGHSLVTYS 906
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL NWGQCPSW F+ SPFTAG QVF+F+ NPCDYF GK+KAMTLSLSVLVAIEMFNSL
Sbjct: 907 QLANWGQCPSWEGFSASPFTAGAQVFSFDANPCDYFQTGKIKAMTLSLSVLVAIEMFNSL 966
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSLLTMPPWVNPWLL+AMS+SF LHFLI+YVPFLAQIFGIV LS NEWLLVL +
Sbjct: 967 NALSEDGSLLTMPPWVNPWLLVAMSISFALHFLIVYVPFLAQIFGIVALSLNEWLLVLVV 1026
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTS-RRKSSKPKSE 514
AFPV+LIDE+LKFVGRCT+G ++S R+ SK K+E
Sbjct: 1027 AFPVILIDELLKFVGRCTSGLRSSDARRYSKHKAE 1061
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225435122|ref|XP_002284552.1| PREDICTED: calcium-transporting ATPase 4, endoplasmic reticulum-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/515 (84%), Positives = 474/515 (92%), Gaps = 1/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS+V LD KSR+LIL +L++MST ALRCLGFAYK++L +F TY+G+EDHPAH LL
Sbjct: 547 IQLLDGSIVELDRKSRDLILQSLYQMSTSALRCLGFAYKEDLLEFATYNGDEDHPAHQLL 606
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
L PSNY+ +E L FVGLVGLRDPPR EV QAIEDCRAAGIRVMVITGDNKNTAEAICRE
Sbjct: 607 LRPSNYSVIESKLIFVGLVGLRDPPRKEVRQAIEDCRAAGIRVMVITGDNKNTAEAICRE 666
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVF EDISLKS+TGKEFME +D+K HLRQ+GGLLFSRAEPRHKQEIVRLLKED EVV
Sbjct: 667 IGVFGSKEDISLKSITGKEFMEHYDQKTHLRQNGGLLFSRAEPRHKQEIVRLLKEDNEVV 726
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIGIAMGI GTEVAKEASDMVLADD+F+TIV+AVGEGRSIYNNM
Sbjct: 727 AMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFNTIVAAVGEGRSIYNNM 786
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 787 KAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 846
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+ WILFRYLVIGLYVGIATVG+FIIWYTHG+FLGI+L GDGHSLVTYS
Sbjct: 847 KKPPRRSDDSLITPWILFRYLVIGLYVGIATVGIFIIWYTHGTFLGIDLSGDGHSLVTYS 906
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL NWGQCPSW F+ SPFTAG QVF+F+ NPCDYF GK+KAMTLSLSVLVAIEMFNSL
Sbjct: 907 QLANWGQCPSWEGFSASPFTAGAQVFSFDANPCDYFQTGKIKAMTLSLSVLVAIEMFNSL 966
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSLLTMPPWVNPWLL+AMS+SF LHFLI+YVPFLAQIFGIV LS NEWLLVL +
Sbjct: 967 NALSEDGSLLTMPPWVNPWLLVAMSISFALHFLIVYVPFLAQIFGIVALSLNEWLLVLVV 1026
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTS-RRKSSKPKSE 514
AFPV+LIDE+LKFVGRCT+G ++S R+ SK K+E
Sbjct: 1027 AFPVILIDELLKFVGRCTSGLRSSDARRYSKHKAE 1061
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120994|ref|XP_002330877.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] gi|222872699|gb|EEF09830.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/504 (84%), Positives = 463/504 (91%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGSVV LD S++LIL +LHEMST ALRCLGFAYK++L +FETY+G+EDHPAH LL
Sbjct: 520 IQLLDGSVVALDQYSKDLILQSLHEMSTSALRCLGFAYKEDLSEFETYNGDEDHPAHQLL 579
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
L P NY+S+E LTFVGL GLRDPPR EV QAIEDCRAAGIRVMVITGDNK+TAEAICRE
Sbjct: 580 LEPRNYSSIESNLTFVGLAGLRDPPRKEVRQAIEDCRAAGIRVMVITGDNKHTAEAICRE 639
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVF +DIS +SLTGKEFM+ DKK HLR SGGLL SRAEPRHKQEIVRLLKEDGEVV
Sbjct: 640 IGVFGPYDDISSQSLTGKEFMDHRDKKTHLRHSGGLLISRAEPRHKQEIVRLLKEDGEVV 699
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 700 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNM 759
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEG+IPVQLLWVNLVTDGPPATALGFNPPD D+M
Sbjct: 760 KAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDGDVM 819
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+ WILFRYLVIGLYVGIATVGVFIIWYTH +F+GI+L GDGHSLVTYS
Sbjct: 820 KKPPRRSDDSLINTWILFRYLVIGLYVGIATVGVFIIWYTHHTFMGIDLSGDGHSLVTYS 879
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL NWGQC SW +F+VSPFTAG+QVF+F+ NPC+YF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 880 QLANWGQCGSWKDFSVSPFTAGSQVFSFDANPCEYFRSGKIKASTLSLSVLVAIEMFNSL 939
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSED SLL MPPWVNPWLLLAMS+SFGLH LILYVPFLAQ+FGIVPLSFNEWLLVLA+
Sbjct: 940 NALSEDCSLLRMPPWVNPWLLLAMSISFGLHALILYVPFLAQVFGIVPLSFNEWLLVLAV 999
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTS 504
AFPV+LIDEVLKFVGRCT G + S
Sbjct: 1000 AFPVILIDEVLKFVGRCTRGLRQS 1023
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|297849064|ref|XP_002892413.1| endoplasmic reticulum-type calcium-transporting ATPase 4 [Arabidopsis lyrata subsp. lyrata] gi|297338255|gb|EFH68672.1| endoplasmic reticulum-type calcium-transporting ATPase 4 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/515 (81%), Positives = 466/515 (90%), Gaps = 1/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS+ LD SR+LIL +LH+MS ALRCLGFAY D DF TYDG+EDHPAH L
Sbjct: 542 IQLLDGSIRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQL 601
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNPSNY+S+E L F G VGLRDPPR EV QAI DCR AGIRVMVITGDNK+TAEAICRE
Sbjct: 602 LNPSNYSSIESNLVFTGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICRE 661
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVFE +EDIS +SLTGKEFM++ D+K HLRQ+GGLLFSRAEP+HKQEIVRLLKEDGEVV
Sbjct: 662 IGVFEADEDISSRSLTGKEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVV 721
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIG+AMGI+GTEVAKEASDMVLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 722 AMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNM 781
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEG+IPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 782 KAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIM 841
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+AWILFRY+VIG+YVG+ATVGVFIIWYTH SF+GI+L DGHSLV+YS
Sbjct: 842 KKPPRRSDDSLITAWILFRYMVIGMYVGVATVGVFIIWYTHNSFMGIDLSQDGHSLVSYS 901
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL +WGQC SW F VSPFTAG+Q F+F+ NPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 902 QLAHWGQCSSWEGFKVSPFTAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 961
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSL+TMPPWVNPWLLLAM+VSFGLHF+ILYVPFLAQ+FGIVPLS NEWLLVLA+
Sbjct: 962 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1021
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTS-RRKSSKPKSE 514
+ PV+LIDEVLKFVGRCT+G + S R +S+K K E
Sbjct: 1022 SLPVILIDEVLKFVGRCTSGYRYSPRTRSAKQKEE 1056
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186478235|ref|NP_172246.3| Ca2+-transporting ATPase [Arabidopsis thaliana] gi|12643934|sp|Q9XES1.2|ECA4_ARATH RecName: Full=Calcium-transporting ATPase 4, endoplasmic reticulum-type gi|8439902|gb|AAF75088.1|AC007583_24 Strong similarity to ER-type calcium pump protein from Arabidopsis thaliana gb|U93845. It is a member of Na+/K+ ATPase C-terminus PF|00690 and a member of E1-E2 ATPase PF|00122 [Arabidopsis thaliana] gi|332190039|gb|AEE28160.1| Ca2+-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/515 (82%), Positives = 465/515 (90%), Gaps = 1/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS LD SR+LIL +LH+MS ALRCLGFAY D DF TYDG+EDHPAH L
Sbjct: 547 IQLLDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQL 606
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNPSNY+S+E L FVG VGLRDPPR EV QAI DCR AGIRVMVITGDNK+TAEAICRE
Sbjct: 607 LNPSNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICRE 666
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVFE +EDIS +SLTGKEFM++ D+K HLRQ+GGLLFSRAEP+HKQEIVRLLKEDGEVV
Sbjct: 667 IGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVV 726
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIG+AMGI+GTEVAKEASD+VLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 727 AMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGEGRSIYNNM 786
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEG+IPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 787 KAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIM 846
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+AWILFRY+VIGLYVG+ATVGVFIIWYTH SF+GI+L DGHSLV+YS
Sbjct: 847 KKPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHNSFMGIDLSQDGHSLVSYS 906
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL +WGQC SW F VSPFTAG+Q F+F+ NPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 907 QLAHWGQCSSWEGFKVSPFTAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSL+TMPPWVNPWLLLAM+VSFGLHF+ILYVPFLAQ+FGIVPLS NEWLLVLA+
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTS-RRKSSKPKSE 514
+ PV+LIDEVLKFVGRCT+G + S R S+K K E
Sbjct: 1027 SLPVILIDEVLKFVGRCTSGYRYSPRTPSAKQKEE 1061
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|343172386|gb|AEL98897.1| Ca2+-transporting ATPase, partial [Silene latifolia] | Back alignment and taxonomy information |
|---|
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/515 (82%), Positives = 465/515 (90%), Gaps = 2/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QL+DGS++ LD ++ ILD LHEMS+ ALRCLGFAYKD+L +F TYDG +DHPAH LL
Sbjct: 505 IQLIDGSILALDQNTKRAILDRLHEMSSSALRCLGFAYKDDLAEFTTYDG-DDHPAHDLL 563
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNPSNY ++E L FVG GLRDPPR EV QAIEDCRAAGIRVMVITGDNKNTAEAICRE
Sbjct: 564 LNPSNYPAIESNLIFVGFAGLRDPPRKEVRQAIEDCRAAGIRVMVITGDNKNTAEAICRE 623
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVF +EDIS +S TG+EFME++DKK+HLR+SGGLLFSRAEPRHKQ+IVRLLKEDGEVV
Sbjct: 624 IGVFGSHEDISSRSFTGREFMELNDKKSHLRKSGGLLFSRAEPRHKQDIVRLLKEDGEVV 683
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD+FSTIVSAV EGRSIYNNM
Sbjct: 684 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNM 743
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 744 KAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 803
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KK PRRSDDSLI+AW LFRYLVIGLYVG+ATVG+FIIWYTHGSF+G++L DGHSLVTYS
Sbjct: 804 KKAPRRSDDSLINAWTLFRYLVIGLYVGLATVGIFIIWYTHGSFMGVDLSQDGHSLVTYS 863
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL NWGQC SW NFT SPFTAG Q FTF+ NPCDYF GK+KAMTLSLSVLVAIEMFNSL
Sbjct: 864 QLANWGQCRSWENFTASPFTAGAQTFTFDANPCDYFESGKIKAMTLSLSVLVAIEMFNSL 923
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSL+TMPPWVNPWLLLAMS+SFGLHF+ILYVPF A++FGIVPLS NEWLLVL
Sbjct: 924 NALSEDGSLVTMPPWVNPWLLLAMSISFGLHFMILYVPFFAKVFGIVPLSLNEWLLVLLC 983
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTSRR-KSSKPKSE 514
+ PV+LIDE+LKF+GRCT+G Q S+ + K K+E
Sbjct: 984 SLPVILIDEILKFIGRCTSGLQRSQSGRIPKTKAE 1018
|
Source: Silene latifolia Species: Silene latifolia Genus: Silene Family: Caryophyllaceae Order: Caryophyllales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116248597|gb|ABJ90443.1| endomembrane Ca2+ ATPase 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/515 (81%), Positives = 464/515 (90%), Gaps = 1/515 (0%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS LD SR+LIL +LH+MS ALRCLGFAY D DF TYDG+EDHPAH L
Sbjct: 547 IQLLDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQL 606
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNPSNY+S+E L FVG VGLRDPPR EV QAI DCR AGIRVMVITGDNK+TAEAICRE
Sbjct: 607 LNPSNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICRE 666
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVFE +EDIS +SLTGKEFM++ D+K HLRQ+GGLLFSRAEP+HKQEIVRLLKEDGEVV
Sbjct: 667 IGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVV 726
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKL DIG+AMGI+GTEVAKEASD+VLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 727 AMTGDGVNDAPALKLVDIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGEGRSIYNNM 786
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEG+IPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 787 KAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIM 846
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+AWILFRY+VIGLYVG+ATVGVFIIWYTH SF+GI+L DGHSLV+YS
Sbjct: 847 KKPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHNSFMGIDLSQDGHSLVSYS 906
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL +WGQC SW F VSPFTAG+Q F+F+ NPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 907 QLAHWGQCSSWEGFKVSPFTAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSL+TMPPWVNPWLLLAM+VSFGLHF+ILYVPFLAQ+FGIVPLS NEWLLVLA+
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTS-RRKSSKPKSE 514
+ PV+LIDEVLKFVGRCT+G + S R S+K K E
Sbjct: 1027 SLPVILIDEVLKFVGRCTSGYRYSPRTPSAKQKEE 1061
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 514 | ||||||
| TAIR|locus:2026555 | 1061 | ECA4 "endomembrane-type CA-ATP | 1.0 | 0.484 | 0.821 | 1.4e-229 | |
| TAIR|locus:2026580 | 1061 | ECA1 "ER-type Ca2+-ATPase 1" [ | 1.0 | 0.484 | 0.819 | 7e-228 | |
| TAIR|locus:2134623 | 1054 | ECA2 "ER-type Ca2+-ATPase 2" [ | 0.963 | 0.469 | 0.726 | 8.1e-195 | |
| UNIPROTKB|Q42883 | 1048 | LCA1 "Calcium-transporting ATP | 0.961 | 0.471 | 0.724 | 4.6e-192 | |
| WB|WBGene00004736 | 1059 | sca-1 [Caenorhabditis elegans | 0.671 | 0.325 | 0.547 | 4.5e-124 | |
| UNIPROTKB|Q292Q0 | 1002 | Ca-P60A "Calcium-transporting | 0.671 | 0.344 | 0.574 | 5.7e-124 | |
| UNIPROTKB|P13585 | 994 | ATP2A1 "Sarcoplasmic/endoplasm | 0.661 | 0.342 | 0.560 | 4e-123 | |
| FB|FBgn0263006 | 1020 | Ca-P60A "Calcium ATPase at 60A | 0.667 | 0.336 | 0.563 | 4e-123 | |
| UNIPROTKB|E2RRB2 | 1000 | ATP2A1 "Uncharacterized protei | 0.657 | 0.338 | 0.549 | 4e-123 | |
| UNIPROTKB|J9P9P2 | 993 | ATP2A1 "Uncharacterized protei | 0.657 | 0.340 | 0.549 | 6.5e-123 |
| TAIR|locus:2026555 ECA4 "endomembrane-type CA-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2215 (784.8 bits), Expect = 1.4e-229, P = 1.4e-229
Identities = 423/515 (82%), Positives = 465/515 (90%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS LD SR+LIL +LH+MS ALRCLGFAY D DF TYDG+EDHPAH L
Sbjct: 547 IQLLDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQL 606
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNPSNY+S+E L FVG VGLRDPPR EV QAI DCR AGIRVMVITGDNK+TAEAICRE
Sbjct: 607 LNPSNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICRE 666
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVFE +EDIS +SLTGKEFM++ D+K HLRQ+GGLLFSRAEP+HKQEIVRLLKEDGEVV
Sbjct: 667 IGVFEADEDISSRSLTGKEFMDVKDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVV 726
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIG+AMGI+GTEVAKEASD+VLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 727 AMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDLVLADDNFSTIVAAVGEGRSIYNNM 786
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEG+IPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 787 KAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIM 846
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+AWILFRY+VIGLYVG+ATVGVFIIWYTH SF+GI+L DGHSLV+YS
Sbjct: 847 KKPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHNSFMGIDLSQDGHSLVSYS 906
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL +WGQC SW F VSPFTAG+Q F+F+ NPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 907 QLAHWGQCSSWEGFKVSPFTAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSL+TMPPWVNPWLLLAM+VSFGLHF+ILYVPFLAQ+FGIVPLS NEWLLVLA+
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTS-RRKSSKPKSE 514
+ PV+LIDEVLKFVGRCT+G + S R S+K K E
Sbjct: 1027 SLPVILIDEVLKFVGRCTSGYRYSPRTPSAKQKEE 1061
|
|
| TAIR|locus:2026580 ECA1 "ER-type Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2199 (779.1 bits), Expect = 7.0e-228, P = 7.0e-228
Identities = 422/515 (81%), Positives = 463/515 (89%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QLLDGS LD SR+LIL +L +MS ALRCLGFAY D DF TYDG+EDHPAH L
Sbjct: 547 IQLLDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQL 606
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
LNPSNY+S+E L FVG VGLRDPPR EV QAI DCR AGIRVMVITGDNK+TAEAICRE
Sbjct: 607 LNPSNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICRE 666
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
IGVFE +EDIS +SLTG EFM++ D+K HLRQ+GGLLFSRAEP+HKQEIVRLLKEDGEVV
Sbjct: 667 IGVFEADEDISSRSLTGIEFMDVQDQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVV 726
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALKLADIG+AMGI+GTEVAKEASDMVLADD+FSTIV+AVGEGRSIYNNM
Sbjct: 727 AMTGDGVNDAPALKLADIGVAMGISGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNM 786
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300
KAFIRYMISSNIGEVASIF TAALGIPEG+IPVQLLWVNLVTDGPPATALGFNPPDKDIM
Sbjct: 787 KAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIM 846
Query: 301 KKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360
KKPPRRSDDSLI+AWILFRY+VIGLYVG+ATVGVFIIWYTH SF+GI+L DGHSLV+YS
Sbjct: 847 KKPPRRSDDSLITAWILFRYMVIGLYVGVATVGVFIIWYTHSSFMGIDLSQDGHSLVSYS 906
Query: 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSL 420
QL +WGQC SW F VSPFTAG+Q F+F+ NPCDYF GK+KA TLSLSVLVAIEMFNSL
Sbjct: 907 QLAHWGQCSSWEGFKVSPFTAGSQTFSFDSNPCDYFQQGKIKASTLSLSVLVAIEMFNSL 966
Query: 421 NALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAI 480
NALSEDGSL+TMPPWVNPWLLLAM+VSFGLHF+ILYVPFLAQ+FGIVPLS NEWLLVLA+
Sbjct: 967 NALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPFLAQVFGIVPLSLNEWLLVLAV 1026
Query: 481 AFPVVLIDEVLKFVGRCTNGSQTSRRK-SSKPKSE 514
+ PV+LIDEVLKFVGRCT+G + S R S+K K E
Sbjct: 1027 SLPVILIDEVLKFVGRCTSGYRYSPRTLSTKQKEE 1061
|
|
| TAIR|locus:2134623 ECA2 "ER-type Ca2+-ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1887 (669.3 bits), Expect = 8.1e-195, P = 8.1e-195
Identities = 364/501 (72%), Positives = 419/501 (83%)
Query: 2 QLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLL 61
QL DGS+V LD SR +IL EM++ LRCLG AYKDEL +F Y +E+HP+H LL
Sbjct: 543 QLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYS-SEEHPSHKKLL 601
Query: 62 NPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI 121
+PS+Y+++E L FVG+VGLRDPPR EV +AIEDCR AGIRVMVITGDNK+TAEAIC EI
Sbjct: 602 DPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICCEI 661
Query: 122 GVFECNEDISLKSLTGKEFMEMHDKKAH--LRQSGGLLFSRAEPRHKQEIVRLLKEDGEV 179
+F NED+S S TGKEFM + + L +SGG +FSRAEPRHKQEIVR+LKE GE+
Sbjct: 662 RLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMGEI 721
Query: 180 VAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNN 239
VAMTGDGVNDAPALKLADIGIAMGI GTEVAKEASDMVLADD+FSTIVSAV EGRSIYNN
Sbjct: 722 VAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNN 781
Query: 240 MKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDI 299
MKAFIRYMISSN+GEV SIF TAALGIPE +IPVQLLWVNLVTDGPPATALGFNP D DI
Sbjct: 782 MKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADIDI 841
Query: 300 MKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTY 359
MKKPPR+SDD LI +W+L RYLVIG YVG+ATVG+F++WYT SFLGI+LI DGH+LV++
Sbjct: 842 MKKPPRKSDDCLIDSWVLIRYLVIGSYVGVATVGIFVLWYTQASFLGISLISDGHTLVSF 901
Query: 360 SQLTNWGQCPSWG-NFTVSPFTA--GNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEM 416
+QL NW +C SWG NFT +P+T G + F +NPCDYF GKVK MTLSL+VLVAIEM
Sbjct: 902 TQLQNWSECSSWGTNFTATPYTVAGGLRTIAFENNPCDYFTLGKVKPMTLSLTVLVAIEM 961
Query: 417 FNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLL 476
FNSLNALSED SLLTMPPW NPWLL+AM+VSF LH +ILYVPFLA +FGIVPLSF EW +
Sbjct: 962 FNSLNALSEDNSLLTMPPWRNPWLLVAMTVSFALHCVILYVPFLANVFGIVPLSFREWFV 1021
Query: 477 VLAIAFPVVLIDEVLKFVGRC 497
V+ ++FPV+LIDE LKF+GRC
Sbjct: 1022 VILVSFPVILIDEALKFIGRC 1042
|
|
| UNIPROTKB|Q42883 LCA1 "Calcium-transporting ATPase, endoplasmic reticulum-type" [Solanum lycopersicum (taxid:4081)] | Back alignment and assigned GO terms |
|---|
Score = 1861 (660.2 bits), Expect = 4.6e-192, P = 4.6e-192
Identities = 361/498 (72%), Positives = 413/498 (82%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
+QL DGS VPLD R L+L EMS+ LRCLG AYKD+L + Y HPAH L
Sbjct: 543 VQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYA-ATHPAHKKL 601
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
L+PS Y+S+E L FVG+VGLRDPPR EVH+A+ DCR AGI++MVITGDNK+TAEA+CRE
Sbjct: 602 LDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCRE 661
Query: 121 IGVFECNEDISLKSLTGKEFMEMHDKKAH--LRQSGGLLFSRAEPRHKQEIVRLLKEDGE 178
I +F E++ S TGKEFM ++ L Q GG +FSRAEPRHKQEIVR+LKE GE
Sbjct: 662 IQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMGE 721
Query: 179 VVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYN 238
+VAMTGDGVNDAPALKLADIGIAMGI GTEVAKEASDMVLADD+FSTIVSAV EGRSIYN
Sbjct: 722 IVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYN 781
Query: 239 NMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKD 298
NMKAFIRYMISSN+GEV SIF TA LGIPE LIPVQLLWVNLVTDGPPATALGFNP D D
Sbjct: 782 NMKAFIRYMISSNVGEVISIFLTAVLGIPECLIPVQLLWVNLVTDGPPATALGFNPADVD 841
Query: 299 IMKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVT 358
IM+KPPR++ D+LI++W+ FRY+VIG YVGIATVG+FI+WYT SFLGIN++ DGH+LV
Sbjct: 842 IMQKPPRKNTDALINSWVFFRYMVIGSYVGIATVGIFIVWYTQASFLGINIVSDGHTLVE 901
Query: 359 YSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFN 418
SQL NWG+C +W NFTVSPF AGN++ TF+D PC+YF GKVKAMTLSLSVLVAIEMFN
Sbjct: 902 LSQLRNWGECSTWTNFTVSPFKAGNRLITFSD-PCEYFTVGKVKAMTLSLSVLVAIEMFN 960
Query: 419 SLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVL 478
SLNALSED SL+ MPPW NPWLL+AMS+SF LH +ILYVPFLA IFGIVPLS EWLLV+
Sbjct: 961 SLNALSEDNSLIKMPPWRNPWLLVAMSLSFALHSVILYVPFLADIFGIVPLSLYEWLLVI 1020
Query: 479 AIAFPVVLIDEVLKFVGR 496
++ PV+LIDEVLKFVGR
Sbjct: 1021 LLSAPVILIDEVLKFVGR 1038
|
|
| WB|WBGene00004736 sca-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 921 (329.3 bits), Expect = 4.5e-124, Sum P(2) = 4.5e-124
Identities = 201/367 (54%), Positives = 249/367 (67%)
Query: 4 LDGSVVPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLL 61
++G VPL I+D + TG LRCL D P + ED
Sbjct: 531 VNGQKVPLTSAMTQKIVDQCVQYGTGRDTLRCLALGTIDT-PVSVSNMNLEDS------- 582
Query: 62 NPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI 121
+ + E +TFVG+VG+ DPPR EV +I+ C AGIRV++ITGDNKNTAEAI R I
Sbjct: 583 --TQFVKYEQDITFVGVVGMLDPPRTEVSDSIKACNHAGIRVIMITGDNKNTAEAIGRRI 640
Query: 122 GVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVA 181
G+F NED + K+ TG+EF ++ ++ LF+R EP HK +IV +L+ GE+ A
Sbjct: 641 GLFGENEDTTGKAYTGREFDDLPPEQQSEACRRAKLFARVEPSHKSKIVDILQSQGEITA 700
Query: 182 MTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241
MTGDGVNDAPALK A+IGI+MG +GT VAK AS+MVLADD+F++IVSAV EGR+IYNNMK
Sbjct: 701 MTGDGVNDAPALKKAEIGISMG-SGTAVAKSASEMVLADDNFASIVSAVEEGRAIYNNMK 759
Query: 242 AFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMK 301
FIRY+ISSN+GEV SIF AALGIPE LIPVQLLWVNLVTDG PATALGFNPPD DIM
Sbjct: 760 QFIRYLISSNVGEVVSIFMVAALGIPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMD 819
Query: 302 KPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQ 361
+ PR ++D LIS W+ FRYL +G YVG+ATVG + W FL L +G +TY Q
Sbjct: 820 RHPRSANDGLISGWLFFRYLAVGTYVGVATVGASMWW-----FL---LYEEGPQ-ITYYQ 870
Query: 362 LTNWGQC 368
LT+W +C
Sbjct: 871 LTHWMRC 877
|
|
| UNIPROTKB|Q292Q0 Ca-P60A "Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] | Back alignment and assigned GO terms |
|---|
Score = 941 (336.3 bits), Expect = 5.7e-124, Sum P(2) = 5.7e-124
Identities = 213/371 (57%), Positives = 252/371 (67%)
Query: 7 SVVPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPS 64
S VPL + IL + TG LRCL A D E D L + +
Sbjct: 533 SKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPIRPEDMD----------LGDST 582
Query: 65 NYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124
+ E LTFVG+VG+ DPPR EV AI CRAAGIRV+VITGDNK TAEAICR IGVF
Sbjct: 583 KFYQYEVNLTFVGVVGMLDPPRKEVFDAIVRCRAAGIRVIVITGDNKATAEAICRRIGVF 642
Query: 125 ECNEDISLKSLTGKEF--MEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAM 182
ED + KS +G+EF + + ++KA + +S LFSR EP+HK +IV L+ E+ AM
Sbjct: 643 TEEEDTTGKSYSGREFDDLSIAEQKAAVARSR--LFSRVEPQHKSKIVEYLQGMNEISAM 700
Query: 183 TGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKA 242
TGDGVNDAPALK A+IGIAMG +GT VAK A++MVLADD+FS+IVSAV EGR+IYNNMK
Sbjct: 701 TGDGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQ 759
Query: 243 FIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKK 302
FIRY+ISSNIGEV SIF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM K
Sbjct: 760 FIRYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDK 819
Query: 303 PPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQL 362
PPR++D+ LIS W+ FRY+ IG YVG ATVG W+ S +G L TY QL
Sbjct: 820 PPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFIASS--------EGPGL-TYWQL 870
Query: 363 TNWGQCPSWGN 373
T+ C G+
Sbjct: 871 THHLSCLGGGD 881
|
|
| UNIPROTKB|P13585 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 935 (334.2 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 203/362 (56%), Positives = 244/362 (67%)
Query: 9 VPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
VPL + IL + E TG LRCL A +D P E +L++ + +
Sbjct: 535 VPLTPAVKEKILAVIKEWGTGRDTLRCLALATRDTPPKMEDM----------MLVDSTKF 584
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
A E LTFVG VG+ DPPR EV +I CR AGIRV++ITGDNK TA AICR IG+F
Sbjct: 585 AEYETDLTFVGCVGMLDPPRKEVMGSIRLCRDAGIRVIMITGDNKGTAIAICRRIGIFTE 644
Query: 127 NEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 186
+E++S ++ TG+EF ++ + F+R EP HK +IV L+ E+ AMTGDG
Sbjct: 645 DEEVSGRAYTGREFDDLPPAEQREACRRACCFARVEPTHKSKIVEFLQSFDEITAMTGDG 704
Query: 187 VNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRY 246
VNDAPALK A+IGIAMG +GT VAK AS+MVLADD+FSTIV+AV EGR+IYNNMK FIRY
Sbjct: 705 VNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRY 763
Query: 247 MISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRR 306
+ISSN+GEV IF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM KPPR
Sbjct: 764 LISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRS 823
Query: 307 SDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWG 366
+ LIS W+ FRYL IG YVG ATVG W+ + DG SL TY QLT++
Sbjct: 824 PKEPLISGWLFFRYLAIGGYVGAATVGAAAWWFLYAE--------DGPSL-TYHQLTHFM 874
Query: 367 QC 368
QC
Sbjct: 875 QC 876
|
|
| FB|FBgn0263006 Ca-P60A "Calcium ATPase at 60A" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 934 (333.8 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 208/369 (56%), Positives = 252/369 (68%)
Query: 9 VPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
VPL + IL + TG LRCL A D + D L + + +
Sbjct: 535 VPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMD----------LGDSTKF 584
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
E LTFVG+VG+ DPPR EV +I CRAAGIRV+VITGDNK TAEAICR IGVF
Sbjct: 585 YQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAE 644
Query: 127 NEDISLKSLTGKEFMEMH--DKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 184
+ED + KS +G+EF ++ ++KA + +S LFSR EP+HK +IV L+ E+ AMTG
Sbjct: 645 DEDTTGKSYSGREFDDLSPTEQKAAVARSR--LFSRVEPQHKSKIVEFLQSMNEISAMTG 702
Query: 185 DGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFI 244
DGVNDAPALK A+IGIAMG +GT VAK A++MVLADD+FS+IVSAV EGR+IYNNMK FI
Sbjct: 703 DGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFI 761
Query: 245 RYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPP 304
RY+ISSNIGEV SIF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM+KPP
Sbjct: 762 RYLISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPP 821
Query: 305 RRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTN 364
R++D+ LIS W+ FRY+ IG YVG ATVG W+ +G L +Y QLT+
Sbjct: 822 RKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFVFSD--------EGPKL-SYWQLTH 872
Query: 365 WGQCPSWGN 373
C G+
Sbjct: 873 HLSCLGGGD 881
|
|
| UNIPROTKB|E2RRB2 ATP2A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 924 (330.3 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 200/364 (54%), Positives = 250/364 (68%)
Query: 9 VPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
VP+ ++ IL + E TG LRCL A +D P E +L + + +
Sbjct: 534 VPMTGPVKDKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMILDDSARF 583
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
E LTFVG+VG+ DPPR EV +I+ CR AGIRV++ITGDNK TA AICR IG+F
Sbjct: 584 MEYETDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGE 643
Query: 127 NEDISLKSLTGKEF--MEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 184
NE+++ ++ TG+EF + + +++ R++ F+R EP HK +IV L+ E+ AMTG
Sbjct: 644 NEEVADRAYTGREFDDLPLAEQREACRRA--CCFARVEPSHKSKIVEYLQSYDEITAMTG 701
Query: 185 DGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFI 244
DGVNDAPALK A+IGIAMG +GT VAK AS+MVLADD+FSTIV+AV EGR+IYNNMK FI
Sbjct: 702 DGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFI 760
Query: 245 RYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPP 304
RY+ISSN+GEV IF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM +PP
Sbjct: 761 RYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPP 820
Query: 305 RRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTN 364
R + LIS W+ FRY+ IG YVG ATVG W+ + DG VTYSQLT+
Sbjct: 821 RSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAD--------DGPG-VTYSQLTH 871
Query: 365 WGQC 368
+ QC
Sbjct: 872 FMQC 875
|
|
| UNIPROTKB|J9P9P2 ATP2A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 924 (330.3 bits), Expect = 6.5e-123, Sum P(2) = 6.5e-123
Identities = 200/364 (54%), Positives = 250/364 (68%)
Query: 9 VPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
VP+ ++ IL + E TG LRCL A +D P E +L + + +
Sbjct: 534 VPMTGPVKDKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMILDDSARF 583
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
E LTFVG+VG+ DPPR EV +I+ CR AGIRV++ITGDNK TA AICR IG+F
Sbjct: 584 MEYETDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGE 643
Query: 127 NEDISLKSLTGKEF--MEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 184
NE+++ ++ TG+EF + + +++ R++ F+R EP HK +IV L+ E+ AMTG
Sbjct: 644 NEEVADRAYTGREFDDLPLAEQREACRRA--CCFARVEPSHKSKIVEYLQSYDEITAMTG 701
Query: 185 DGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFI 244
DGVNDAPALK A+IGIAMG +GT VAK AS+MVLADD+FSTIV+AV EGR+IYNNMK FI
Sbjct: 702 DGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFI 760
Query: 245 RYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPP 304
RY+ISSN+GEV IF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM +PP
Sbjct: 761 RYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPP 820
Query: 305 RRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTN 364
R + LIS W+ FRY+ IG YVG ATVG W+ + DG VTYSQLT+
Sbjct: 821 RSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAD--------DGPG-VTYSQLTH 871
Query: 365 WGQC 368
+ QC
Sbjct: 872 FMQC 875
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9XES1 | ECA4_ARATH | 3, ., 6, ., 3, ., 8 | 0.8213 | 1.0 | 0.4844 | yes | no |
| P92939 | ECA1_ARATH | 3, ., 6, ., 3, ., 8 | 0.8194 | 1.0 | 0.4844 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 514 | |||
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-118 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 3e-93 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-73 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-64 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 9e-64 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-57 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 5e-48 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-41 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 8e-41 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-38 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 5e-36 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-32 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-32 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-30 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-29 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-21 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-20 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-20 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 9e-20 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-19 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-19 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-15 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-14 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 6e-09 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 3e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 5e-07 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 4e-06 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 2e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 2e-04 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 2e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 3e-04 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 4e-04 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 738 bits (1907), Expect = 0.0
Identities = 295/497 (59%), Positives = 349/497 (70%), Gaps = 43/497 (8%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTG-ALRCLGFAYKDELPDFETYDGNEDHPAHTL 59
+ DG VPL K +N IL + EM T ALRCL A+KD E
Sbjct: 463 ILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLL--------- 513
Query: 60 LLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICR 119
+P+N+ ++E LTF+G+VG+ DPPR EV AIE CR AGIRV++ITGDNK TAEAICR
Sbjct: 514 -SDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICR 572
Query: 120 EIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEV 179
IG+F +ED++ KS TG+EF EM K +LFSR EP HK E+V LL+E GE+
Sbjct: 573 RIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEI 632
Query: 180 VAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNN 239
VAMTGDGVNDAPALK ADIGIAMG +GTEVAKEASDMVLADD+F+TIV+AV EGR+IYNN
Sbjct: 633 VAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNN 691
Query: 240 MKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDI 299
MK FIRYMISSNIGEV IF TAALGIPEGLIPVQLLWVNLVTDG PATALGFNPPDKDI
Sbjct: 692 MKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDI 751
Query: 300 MKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTY 359
M KPPRR D+ LI+ W+ FRYLV+G+YVG+ATVG F+ WY
Sbjct: 752 MWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWY-------------------- 791
Query: 360 SQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNS 419
LT++ C +FT P ++P Y GK A T+SLSVLV IEMFN+
Sbjct: 792 -LLTHFTGCDED-SFTTCPDF---------EDPDCYVFEGKQPARTISLSVLVVIEMFNA 840
Query: 420 LNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLA 479
LNALSED SLL MPPWVN WL+ A+ +S LHFLILYVPFL++IFG+ PLS +WL+VL
Sbjct: 841 LNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLK 900
Query: 480 IAFPVVLIDEVLKFVGR 496
++ PV+L+DEVLKF R
Sbjct: 901 LSLPVILVDEVLKFFSR 917
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 368 bits (947), Expect = e-118
Identities = 173/487 (35%), Positives = 249/487 (51%), Gaps = 78/487 (16%)
Query: 6 GSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSN 65
G + PL + + +A+ E+++ LR L AYK +L E D ++
Sbjct: 485 GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYK-KLDRAEKDDEVDEI----------- 532
Query: 66 YASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFE 125
E L F+GL G+ DPPR +V +AIE+ R AGI+V +ITGD+ TA AI +E G+
Sbjct: 533 ----ESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIE- 587
Query: 126 CNEDISLKSLTGKEFMEMHDKK-----AHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVV 180
E S + G E + D++ L +F+R P K IV L++ G VV
Sbjct: 588 -AEAESALVIDGAELDALSDEELAELVEELS-----VFARVSPEQKARIVEALQKSGHVV 641
Query: 181 AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240
AMTGDGVNDAPALK AD+GIAMG GT+ AKEA+D+VL DD+F+TIV AV EGR +Y N+
Sbjct: 642 AMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNI 701
Query: 241 KAFIRYMISSNIGEVASIFFTAALGIPEG-LIPVQLLWVNLVTDGPPATALGFNPPDKDI 299
K FI Y++S N+GEV ++ + + L P+QLLW+NL+TD PA ALG P+ D+
Sbjct: 702 KKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDV 761
Query: 300 MKKPPRRSDDSLISAWILFRYLVIGLYVG-IATVGVFIIWYTHGSFLGINLIGDGHSLVT 358
MK+PPR ++ L + I +R+++I + I + F+++ LG G L
Sbjct: 762 MKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYL-----LGFIANTLGLDLFQ 816
Query: 359 YSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFN 418
T FT VLV I++
Sbjct: 817 ALLQTTA--------FT----------------------------------VLVLIQLLL 834
Query: 419 SLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQ-IFGIVPLSFNEWLLV 477
+L S L+ + N +L LA+ V L LI+++P L IF PLS EWL+
Sbjct: 835 TLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIA 894
Query: 478 LAIAFPV 484
+A+A +
Sbjct: 895 IAVALLL 901
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 302 bits (775), Expect = 3e-93
Identities = 162/492 (32%), Positives = 253/492 (51%), Gaps = 87/492 (17%)
Query: 5 DGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPS 64
DG + L + R++I + EM++ LR + FA E
Sbjct: 477 DGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQ-------------------- 516
Query: 65 NYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124
LTF+GLVG+ DPPR V +A+ G+R+++ITGD++ TA +I R +G+
Sbjct: 517 --------LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP 568
Query: 125 ECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 184
+ +S++G++ M D++ +F+RA P HK +IV+ L++ G+VVAMTG
Sbjct: 569 S----KTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTG 624
Query: 185 DGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFI 244
DGVNDAPALKLADIG+AMG GT+VAKEA+DM+L DDDF+TI+SA+ EG+ I+NN+K FI
Sbjct: 625 DGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFI 684
Query: 245 RYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPP 304
+ +S+++ ++ I +G P L +Q+LW+N++ DGPPA +LG P DKD+M+KPP
Sbjct: 685 TFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPP 744
Query: 305 RRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTN 364
R +D +++ ++ + LV + + + T+ VF+ ++ +
Sbjct: 745 RPRNDKILTKDLIKKILVSAIIIVVGTLFVFVR-----------------------EMQD 781
Query: 365 WGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALS 424
G T T F F D MFN+L S
Sbjct: 782 -------GVITARDTTMTFTCFVFFD-------------------------MFNALACRS 809
Query: 425 EDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPV 484
+ S+ + + N A+ S L++Y P L +F LS + L +L I V
Sbjct: 810 QTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSV 869
Query: 485 VLIDEVLKFVGR 496
++DE+ K V R
Sbjct: 870 CIVDEIRKKVER 881
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 250 bits (639), Expect = 2e-73
Identities = 151/500 (30%), Positives = 240/500 (48%), Gaps = 88/500 (17%)
Query: 5 DGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKD----ELPDFETYDGNEDHPAHTLL 60
+G P+ ++ D + +++ ALR + AY+D E P +
Sbjct: 520 NGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKD-------------- 565
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120
P+ GLT +G+VG++DP R V +A+++C+ AGI V ++TGDN +TA+AI R
Sbjct: 566 -YPNK------GLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN 618
Query: 121 IGVFE----CNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKED 176
G+ E +SL +E + K LR + +R+ P KQ +V +LK+
Sbjct: 619 CGILTFGGLAMEGKEFRSLVYEEMDPILPK---LR-----VLARSSPLDKQLLVLMLKDM 670
Query: 177 GEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSI 236
GEVVA+TGDG NDAPALKLAD+G +MGI+GTEVAKEASD++L DD+F++IV AV GR++
Sbjct: 671 GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNV 730
Query: 237 YNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPD 296
Y+N++ F+++ ++ N+ V F + + L VQLLWVNL+ D A AL PP
Sbjct: 731 YDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPT 790
Query: 297 KDIMKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSL 356
+ ++ + P + LIS + L Y V FI+ + GS ++ D +
Sbjct: 791 EALLDRKPIGRNAPLISRSMWKNILGQAGY---QLVVTFILLFAGGSIFDVS-GPDEITS 846
Query: 357 VTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEM 416
+L FN V +++
Sbjct: 847 HQQGEL---------------------NTIVFN--------------------TFVLLQL 865
Query: 417 FNSLNA--LSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEW 474
FN +NA L E + + N + M +FG F ++ V F F V LS +W
Sbjct: 866 FNEINARKLYERNVFEGL--FKNRIFVTIMGFTFG--FQVIIVEFGGSFFSTVSLSIEQW 921
Query: 475 LLVLAIAFPVVLIDEVLKFV 494
+ + + ++ +L+ +
Sbjct: 922 IGCVLLGMLSLIFGVLLRLI 941
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 1e-64
Identities = 126/378 (33%), Positives = 205/378 (54%), Gaps = 43/378 (11%)
Query: 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAY----KDELPDFETYDGNEDHPAHT 58
L+ G PLD + + +A E+ R LGF + ++ P+ +D ++
Sbjct: 496 LIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDD------ 549
Query: 59 LLLN-PSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAI 117
+N P++ L FVGL+ + DPPR V A+ CR+AGI+V+++TGD+ TA+AI
Sbjct: 550 --VNFPTD------NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAI 601
Query: 118 CREIGVF----ECNEDISLK----------------SLTGKEFMEMHDKKAH--LRQSGG 155
+ +G+ E EDI+ + + G + +M ++ L+
Sbjct: 602 AKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTE 661
Query: 156 LLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASD 215
++F+R P+ K IV + G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+D
Sbjct: 662 IVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAAD 721
Query: 216 MVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQL 275
M+L DD+F++IV+ V EGR I++N+K I Y ++SNI E+ IP L + +
Sbjct: 722 MILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITI 781
Query: 276 LWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVG 333
L ++L TD PA +L + + DIMK+ PR ++D + I Y IG+ +
Sbjct: 782 LCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFF 841
Query: 334 VFIIWYTHGSFLGINLIG 351
+ + FL ++L+G
Sbjct: 842 TYFVILAENGFLPLHLVG 859
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 224 bits (571), Expect = 9e-64
Identities = 117/352 (33%), Positives = 192/352 (54%), Gaps = 24/352 (6%)
Query: 8 VVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYA 67
+ PL+ R LI+ + ++ LR L FA K F+ D N+D L N A
Sbjct: 578 ISPLEDCDRELIIANMESLAAEGLRVLAFASKS----FDKADNNDDQ----LKNETLNRA 629
Query: 68 SMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN 127
+ E L F+GL+G+ DPPRNE A+E C AGI V ++TGD TA+AI +E+G+ N
Sbjct: 630 TAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN 689
Query: 128 ------EDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVA 181
E + +TG +F + D++ ++ L+ +R P+ K +++ L A
Sbjct: 690 FIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCA 749
Query: 182 MTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241
MTGDGVND+P+LK+A++GIAMGI G++VAK+ASD+VL+DD+F++I++A+ EGR +++N+
Sbjct: 750 MTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIM 809
Query: 242 AFIRYMISSNIGEVASIFFTAALGIPEG-----LIPVQLLWVNLVTDGPPATALGFNPPD 296
F+ ++++ N+ E + A G L PV++LW ++T PA LG
Sbjct: 810 KFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAA 869
Query: 297 KDIMKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGIN 348
D+M + P ++ + ++ G ++G + + F G G
Sbjct: 870 PDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFT-----GILYGFG 916
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 200 bits (510), Expect = 1e-57
Identities = 93/268 (34%), Positives = 127/268 (47%), Gaps = 80/268 (29%)
Query: 23 LHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLR 82
E++ LR L FA K+ +E L F+GL+
Sbjct: 356 YLELARQGLRVLAFASKE----------------------------LEDDLEFLGLITFE 387
Query: 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFME 142
DP R + + IE+ +AAGI+V++ITGDN TA+AI +E+G+
Sbjct: 388 DPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGIDV----------------- 430
Query: 143 MHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAM 202
F+R P K +IV L++ G +VAMTGDGVNDAPALK AD+GIAM
Sbjct: 431 ---------------FARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM 475
Query: 203 GIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTA 262
G AK A+D+VL DDD S IV AV EGR I++N+K+ I + I+ N+ A
Sbjct: 476 G------AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLIL----IPLA 525
Query: 263 ALGIPEGLIPVQLLWVNLVTDGPPATAL 290
L I + L+ A AL
Sbjct: 526 LLLIV----------IILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 5e-48
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 53/228 (23%)
Query: 267 PEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLY 326
P L P+Q+LW+NLVTDG PA ALGF PP+ D+MK+PPR+ + L S +L R L+ GL
Sbjct: 1 PLPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLL 60
Query: 327 VGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVF 386
+ I T+ VF FLG+ G S
Sbjct: 61 IAIVTLLVF--------FLGLLGFGISES------------------------------- 81
Query: 387 TFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSV 446
A T++ + LV ++FN+LNA S SL + + N LLLA+ +
Sbjct: 82 --------------GLAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSNKLLLLAVLL 127
Query: 447 SFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFV 494
S L LI+YVP L +FG PLS +WL+VL +A V+L+ E+ K +
Sbjct: 128 SLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRKLL 175
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 158 bits (400), Expect = 3e-41
Identities = 99/337 (29%), Positives = 162/337 (48%), Gaps = 35/337 (10%)
Query: 6 GSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSN 65
G+VV L ++ + D EM+ +R + A K T E ++
Sbjct: 454 GAVVTLSESEKSELQDMTAEMNRQGIRVIAVATK-------TLKVGE-----------AD 495
Query: 66 YASM-ECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124
+ E L G +G DPP+ +AI GI V V+TGDN+ IC+E+G+
Sbjct: 496 FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI- 554
Query: 125 ECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 184
D L G + E+ D++ +F+R P K I+ LLK+ G V G
Sbjct: 555 -DANDF----LLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLG 609
Query: 185 DGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFI 244
DG+NDAPAL+ AD+GI++ A ++AKEASD++L + + V EGR+ + N+ ++
Sbjct: 610 DGINDAPALRKADVGISVDTA-ADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYL 668
Query: 245 RYMISSNIGEVASIFFTAALGIP-EGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKP 303
+ SSN G V S+ +A IP ++ + LL NL+ D L ++ D++ +KK
Sbjct: 669 KMTASSNFGNVFSVLVASAF-IPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKK- 725
Query: 304 PRRSDDSLISAWILFRYLVIGLYVGIATVGVF-IIWY 339
P + + + ++L IG I + F ++W+
Sbjct: 726 PHQWEQKGMGRFMLC----IGPVSSIFDIATFLLMWF 758
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 8e-41
Identities = 93/303 (30%), Positives = 145/303 (47%), Gaps = 31/303 (10%)
Query: 6 GSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSN 65
G +VPLD I ++ LR + A K Y D
Sbjct: 489 GEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDY-QRAD------------ 535
Query: 66 YASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFE 125
E L G + DPP+ A++ +A+G+ V ++TGD++ A +C E+G+
Sbjct: 536 ----ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL-- 589
Query: 126 CNEDISLKSLTGKEFMEMHDKKAHLRQSGG--LLFSRAEPRHKQEIVRLLKEDGEVVAMT 183
+ + L G + + D L LF+R P HK+ IV LLK +G VV
Sbjct: 590 -DAG---EVLIGSDIETLSD--DELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFM 643
Query: 184 GDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAF 243
GDG+NDAPAL+ ADIGI++ ++A+EA+D++L + + V EGR + NM +
Sbjct: 644 GDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
Query: 244 IRYMISSNIGEVASIFFTAALGIP-EGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKK 302
I+ SSN G V S+ +A +P ++P+ LL NL+ D A+ F+ D + ++K
Sbjct: 703 IKMTASSNFGNVFSVLVASAF-LPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQK 760
Query: 303 PPR 305
P R
Sbjct: 761 PQR 763
|
Length = 902 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 2e-38
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 32/168 (19%)
Query: 74 TFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLK 133
VG++ L D R + +AI +A GI+V+++TGDN+ TAEAI +E+G+ E
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-------- 578
Query: 134 SLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 193
LL P K EIVR L+ +G VAM GDG+NDAPAL
Sbjct: 579 --------------VR----AELL-----PEDKAEIVRELQAEGRKVAMVGDGINDAPAL 615
Query: 194 KLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241
AD+GIAMG +GT+VA EA+D+VL DD S + A+ R+ +K
Sbjct: 616 AAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 5e-36
Identities = 90/307 (29%), Positives = 141/307 (45%), Gaps = 47/307 (15%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG----VFECNEDI 130
F+GL+ L DPPR++ + IE R G+ V ++TGD+ A+ R +G ++ + +
Sbjct: 433 FLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTA-DVL 491
Query: 131 SLKSLTGK------EFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 184
E +E D F+ P HK EIV +L++ G +V MTG
Sbjct: 492 LKGDNRDDLPSGLGEMVEDADG-----------FAEVFPEHKYEIVEILQKRGHLVGMTG 540
Query: 185 DGVNDAPALKLADIGIAMGIAG-TEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAF 243
DGVNDAPALK AD+GIA +AG T+ A+ A+D+VL + S IV A+ E R I+ MK++
Sbjct: 541 DGVNDAPALKKADVGIA--VAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSY 598
Query: 244 IRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKP 303
+ Y I+ I + F L + P+ ++ + ++ DG T D +K
Sbjct: 599 VIYRIAETI-RIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMTI------AYDNVKPS 651
Query: 304 PRRSDDSLISAWILFRYLVIGLYVGI-ATVGVFIIWYT-------HGSFLGINLIGDGHS 355
L W L + +GI + F++ F L G+ S
Sbjct: 652 K------LPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLLHGNLQS 705
Query: 356 LVTYSQL 362
+ Y Q+
Sbjct: 706 FI-YLQV 711
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 2e-32
Identities = 64/169 (37%), Positives = 95/169 (56%), Gaps = 33/169 (19%)
Query: 74 TFVGLVGLRDPPRNEVHQAIED-CRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISL 132
+G++ LRD R E +AI RA GI+++++TGDN++ AEA+ E+G+ E
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------- 426
Query: 133 KSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
+ + P K IV+ L+E+G VVAM GDG+NDAPA
Sbjct: 427 ------------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPA 462
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241
L AD+GIAMG AG++VA EA+D+VL +DD S++ +A+ R +K
Sbjct: 463 LAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIK 510
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 5e-32
Identities = 74/243 (30%), Positives = 112/243 (46%), Gaps = 47/243 (19%)
Query: 46 ETYDGNEDHPAHTLLLNPSNYASMECGL----TFVGLVGLRDPPRNEVHQAIEDCRAAGI 101
E GN + P + + T++G + L D PR + +AI + +A GI
Sbjct: 320 EVRIGNPRSLEAAVGARPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGI 379
Query: 102 -RVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160
+V+++TGD + AE + RE+G+ E A L
Sbjct: 380 EKVVMLTGDRRAVAERVARELGIDEV--------------------HAELL--------- 410
Query: 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLAD 220
P K EIV+ L+E VAM GDG+NDAPAL AD+GIAMG +G++VA E +D+VL +
Sbjct: 411 --PEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLN 468
Query: 221 DDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNL 280
DD S + A+ R R ++ N+ V ++ L I L V LW+ +
Sbjct: 469 DDLSRLPQAIRLARR--------TRRIVKQNV--VIALGIILLL-ILLALFGVLPLWLAV 517
Query: 281 VTD 283
+
Sbjct: 518 LGH 520
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 2e-30
Identities = 87/300 (29%), Positives = 139/300 (46%), Gaps = 25/300 (8%)
Query: 5 DGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPS 64
+V PLD R +L + R L A + E+P G T
Sbjct: 486 GDTVRPLDEARRERLLALAEAYNADGFRVLLVATR-EIPG-----GESRAQYST------ 533
Query: 65 NYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124
+ E L G + DPP+ AI R G+ V V+TGDN ICRE+G+
Sbjct: 534 ---ADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGL- 589
Query: 125 ECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 184
+ L G E M D +F++ P K +++ L+ +G V G
Sbjct: 590 -----EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLG 644
Query: 185 DGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFI 244
DG+NDAPAL+ AD+GI++ +G ++AKE++D++L + + V +GR + N+ ++
Sbjct: 645 DGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYL 703
Query: 245 RYMISSNIGEVASIFFTAALGIP-EGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKP 303
SSN G V S+ +A IP ++ + LL NL+ D +L ++ DK+ ++KP
Sbjct: 704 NMTASSNFGNVFSVLVASAF-IPFLPMLAIHLLLQNLMYD-ISQLSLPWDKMDKEFLRKP 761
|
Length = 903 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 2e-29
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 32/166 (19%)
Query: 76 VGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSL 135
G++ L D + E + I+ + GI +++TGDN+ TA+A+ +E+G+ E++
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI----ENV----- 456
Query: 136 TGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 195
+ P K +++ L+E G+VVAM GDG+NDAPAL
Sbjct: 457 ----------------------RAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQ 494
Query: 196 ADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241
AD+GIA+G AGT+VA EA+D+VL +D + + +A+ R +K
Sbjct: 495 ADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 4e-21
Identities = 74/218 (33%), Positives = 105/218 (48%), Gaps = 48/218 (22%)
Query: 74 TFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLK 133
+GL+ L+D R + QAI + +A GI+ +++TGDN A AI E+G+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 134 SLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 193
D +A GLL P K + V L + +AM GDG+NDAPA+
Sbjct: 608 -----------DFRA------GLL-----PEDKVKAVTELNQH-APLAMVGDGINDAPAM 644
Query: 194 KLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIG 253
K A IGIAMG +GT+VA E +D L + + + R+ + N IR I+ +G
Sbjct: 645 KAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHAN----IRQNITIALG 699
Query: 254 EVASIFFTAALGIPEGLIPVQLLWVNLVTD-GPPATAL 290
A T LGI G LW+ ++ D G ATAL
Sbjct: 700 LKAIFLVTTLLGI-TG------LWLAVLADSG--ATAL 728
|
Length = 741 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 1e-20
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 32/162 (19%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS 134
+G++ L+D + + + + R GI+ ++ITGDN TA AI E GV
Sbjct: 438 ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----------- 486
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 194
+F+ + A P K ++R + +G +VAMTGDG NDAPAL
Sbjct: 487 ---DDFI-----------------AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALA 526
Query: 195 LADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSI 236
AD+G+AM +GT+ AKEA++MV D + + ++ V G+ +
Sbjct: 527 QADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567
|
Length = 681 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 2e-20
Identities = 65/202 (32%), Positives = 95/202 (47%), Gaps = 46/202 (22%)
Query: 76 VGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSL 135
L+ +RDP R++ A++ AG R++++TGDN TA AI +E G+ +E I+
Sbjct: 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI---DEVIA---- 694
Query: 136 TGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 195
G+L P K E ++ L+ G VAM GDG+NDAPAL
Sbjct: 695 -------------------GVL-----PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQ 730
Query: 196 ADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEV 255
AD+GIAMG G++VA E + + L + A+ R+ NMK +
Sbjct: 731 ADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQ-----------NL 778
Query: 256 ASIFFTAALGIPEGLIPVQLLW 277
F +LGIP I +LW
Sbjct: 779 LGAFIYNSLGIP---IAAGILW 797
|
Length = 834 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 9e-20
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 35/190 (18%)
Query: 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLT 136
G++ L+D + + + R GI+ ++ITGDN+ TA AI E GV
Sbjct: 439 GVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV------------- 485
Query: 137 GKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 196
+F+ + A P K ++R + +G++VAMTGDG NDAPAL A
Sbjct: 486 -DDFI-----------------AEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQA 527
Query: 197 DIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVA 256
D+G+AM +GT+ AKEA++MV D D + ++ V G+ + A + I++++ +
Sbjct: 528 DVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYF 586
Query: 257 SIF---FTAA 263
+I F AA
Sbjct: 587 AIIPAIFAAA 596
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 91.4 bits (228), Expect = 2e-19
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 32/148 (21%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS 134
+G++ L+D + + + + R GI+ ++ITGDN TA AI E GV D
Sbjct: 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-----D----- 485
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 194
+F+ + A P K ++R + +G +VAMTGDG NDAPAL
Sbjct: 486 ----DFL-----------------AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALA 524
Query: 195 LADIGIAMGIAGTEVAKEASDMVLADDD 222
AD+G+AM +GT+ AKEA +MV D +
Sbjct: 525 QADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 2e-19
Identities = 99/401 (24%), Positives = 157/401 (39%), Gaps = 95/401 (23%)
Query: 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLN 62
L VP D++ + L + R L AYK ELP +
Sbjct: 593 LCSPETVPSDYQ------EVLKSYTREGYRVLALAYK-ELP----------KLTLQKAQD 635
Query: 63 PSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG 122
S A +E LTF+G + +P + + + I++ + A IR ++ITGDN TA + RE G
Sbjct: 636 LSRDA-VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECG 694
Query: 123 V------------------------FECNEDISLKS------------------------ 134
+ FE + I S
Sbjct: 695 IVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHL 754
Query: 135 -LTGKEF--MEMHDKKAHLR-QSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDA 190
++GK F ++ H + LR S +F+R P K+ +V LL++ V M GDG ND
Sbjct: 755 AMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDC 814
Query: 191 PALKLADIGIAM-----GIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIR 245
ALK AD+GI++ +A +K AS S + + + EGR +
Sbjct: 815 GALKQADVGISLSEAEASVAAPFTSKLAS--------ISCVPNVIREGRCALVTSFQMFK 866
Query: 246 YMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR 305
YM ++ + S+ +G G Q L ++L+ P A + N P K + K+ P
Sbjct: 867 YMALYSLIQFYSVSILYLIGSNLG--DGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP- 923
Query: 306 RSDDSLISAWILFRYLVIGLYVGIAT-VGVFII-----WYT 340
+L S +IL ++I + I + V + WY
Sbjct: 924 --PSNLFSVYILTS-VLIQFVLHILSQVYLVFELHAQPWYK 961
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 78.6 bits (193), Expect = 2e-15
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 32/184 (17%)
Query: 76 VGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSL 135
+G++ L+D ++ + + + R GI ++ TGDN+ TA I +E GV
Sbjct: 433 LGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV------------ 480
Query: 136 TGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 195
D+ + +P K ++R + G +VAMTGDG NDAPAL
Sbjct: 481 ---------DR----------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAE 521
Query: 196 ADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEV 255
A++G+AM +GT AKEA++++ D + + ++ V G+ + + + I+++I +
Sbjct: 522 ANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKY 580
Query: 256 ASIF 259
+I
Sbjct: 581 FAIL 584
|
Length = 673 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 1e-14
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 20/122 (16%)
Query: 76 VGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSL 135
+GL+ L DP +A+++ + AGI++ ++TGDN+ TA AI R +G+F+
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFD---------- 135
Query: 136 TGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 195
A L G+ + +P+ + + L E V M GDGVND PA K
Sbjct: 136 --------ALVSADLYGLVGV--GKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKA 185
Query: 196 AD 197
A
Sbjct: 186 AG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 6e-09
Identities = 115/547 (21%), Positives = 183/547 (33%), Gaps = 139/547 (25%)
Query: 23 LHEMSTGALRCLGFAYKDELP-DFETYDGNEDHPAHTLLLNPSN-----YASMECGLTFV 76
L ++ LR L AY++ ++E ++ + A T L + S+E L +
Sbjct: 565 LENYASEGLRTLCIAYRELSEEEYEEWNEEYNE-ASTALTDREEKLDVVAESIEKDLILL 623
Query: 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAI---CR-------EIGVFEC 126
G + D + V + IE R AGI++ V+TGD TA I CR +I +
Sbjct: 624 GATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSD 683
Query: 127 NEDISLKSL---------TGKEFMEMHDKKAH----------------LRQS-------- 153
+ D + T +EF + D L +
Sbjct: 684 SLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKC 743
Query: 154 GGLLFSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGIAMGIAGTE--VA 210
++ R P K ++VRL+K+ G+ GDG ND ++ AD+G+ GI+G E A
Sbjct: 744 KAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKEGMQA 801
Query: 211 KEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGL 270
ASD + F T + V GR Y + I Y N
Sbjct: 802 VMASDFAIGQFRFLTKLLLV-HGRWSYKRISKMILYFFYKN----LIFAII--------- 847
Query: 271 IPVQLLWVNLVTDGPPATAL------GFN------PP------DKDIMKKPPRRSDDSLI 312
W + T +N P D+D +
Sbjct: 848 ----QFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQD-------------V 890
Query: 313 SAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTY--SQLTNWGQCPS 370
SA + RY LY G T F G L G SLV +
Sbjct: 891 SASLSLRYPQ--LY-REGQKGQGFSTKT---FWGWMLDGIYQSLVIFFFPMFAYILGDFV 944
Query: 371 WGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLL 430
+ G VFT + ++L + + I +N ++ ++ GS+L
Sbjct: 945 SSGSVDDFSSVGVIVFT-------------ALVVIVNLKIALEINRWNWISLITIWGSIL 991
Query: 431 TMPPWVNPWLLLAMSVSFGLHFLILYVP-FLAQIFGIVPLSFNEWLLVLAIAFPVVLIDE 489
WL + ++ I P F ++ +F WL++L I +L
Sbjct: 992 V-------WL-----IFVIVYSSIFPSPAFYKAAPRVMG-TFGFWLVLLVIVLISLLPRF 1038
Query: 490 VLKFVGR 496
K + R
Sbjct: 1039 TYKAIQR 1045
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 3e-08
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 88 EVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKK 147
V +A+++ + GI++ + T ++ + E+G+ + + + +T + K+
Sbjct: 28 GVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPV----ITSNGAAIYYPKE 83
Query: 148 AHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK-LADIGIAM 202
G + P ++LL D E V M GD +ND K +G+A+
Sbjct: 84 GLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 5e-07
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 158 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA-MGIAGT-EVAKEASD 215
F+ A+P K +I+R LK+ E V M G+G ND AL+ AD+GI + G E +D
Sbjct: 74 FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTAD 133
Query: 216 MVLAD 220
+VL +
Sbjct: 134 VVLKE 138
|
Length = 152 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 25/139 (17%)
Query: 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGV-------FECNEDISLKS 134
+ + +AAG +V++I+G E I +G+ E ++
Sbjct: 75 FLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGK---- 130
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 194
LTG+ + D + + +E+ L E GD ND P L+
Sbjct: 131 LTGRVVGPICDGEGKAKA-------------LRELAAELGIPLEETVAYGDSANDLPMLE 177
Query: 195 LADIGIAMGIAGTEVAKEA 213
A + IA+ ++ A
Sbjct: 178 AAGLPIAVN-PKPKLRALA 195
|
Length = 212 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAI 117
+++E LT +G + D + V +AIE R AGI+V V+TGD + TA +I
Sbjct: 709 SNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 169 IVRLLKEDG----EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
+ L K G EV+A GDG ND L+LA +G+AMG A + K A+D V ++
Sbjct: 191 LKALAKHLGIDLEEVIAF-GDGENDIEMLELAGLGVAMGNA-SPEVKAAADYVTGSNN 246
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
Q + L E V GDG+ND L+ A G+AMG A E K +D V ++
Sbjct: 194 QSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDSNN 248
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 153 SGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKE 212
G ++ + + + ++R E GDG ND +K A +GIA ++
Sbjct: 144 EGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQ 201
Query: 213 ASDMVLADDDFSTIVS 228
+D+ + D + I+
Sbjct: 202 KADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
EV A+ GD ND ++A G+A+ A E KEA+D V
Sbjct: 175 EVAAI-GDSENDLEMFEVAGFGVAVANA-DEELKEAADYV 212
|
Length = 230 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 514 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 99.97 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 99.96 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 99.95 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 99.94 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.93 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 99.92 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 99.92 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 99.92 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.92 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.91 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 99.91 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.89 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 99.88 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 99.86 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.69 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.68 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.67 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.67 | |
| PLN02887 | 580 | hydrolase family protein | 99.65 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.64 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.62 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.62 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.6 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.58 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.58 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.58 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.56 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.52 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.47 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.42 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.39 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.35 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.35 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.28 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.23 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.19 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.19 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.17 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.16 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.09 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.06 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.96 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.94 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.85 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.82 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.82 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.8 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.8 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.73 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.72 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.66 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.64 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.61 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.6 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.57 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.55 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.54 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.52 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.51 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.5 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.49 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.49 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.49 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.46 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.46 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.45 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.44 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.44 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.38 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.34 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.34 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 98.34 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 98.27 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.26 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.26 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.25 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 98.2 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 98.16 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 98.16 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 98.15 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 98.11 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 98.09 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 98.09 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 98.06 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 98.04 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 98.03 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 98.02 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 98.01 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.95 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.95 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.93 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 97.93 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.91 | |
| PLN02940 | 382 | riboflavin kinase | 97.9 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.89 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.88 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.87 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.87 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.86 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.85 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 97.84 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.81 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.79 | |
| PLN02423 | 245 | phosphomannomutase | 97.79 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.77 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 97.75 | |
| PLN02811 | 220 | hydrolase | 97.74 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 97.72 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.7 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.7 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.67 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 97.65 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.63 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 97.63 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 97.61 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 97.59 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.56 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 97.55 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.53 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 97.51 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 97.5 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 97.44 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 97.43 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.4 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 97.35 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 97.32 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 97.22 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 97.22 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 97.21 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 97.2 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.15 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 97.1 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 97.07 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 97.06 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 97.05 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 96.99 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.98 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.96 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 96.93 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 96.86 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.8 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 96.78 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 96.58 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 96.54 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 96.46 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.41 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.27 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 95.85 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.81 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 95.53 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 95.25 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 95.18 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 95.02 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 94.97 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 94.93 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.73 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 94.37 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 94.28 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 94.1 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 94.09 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 93.97 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 93.94 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 93.33 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.13 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 92.97 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 92.59 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 92.35 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 92.13 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 92.09 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 91.59 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 91.44 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 90.63 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 88.5 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 88.21 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 87.84 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 85.58 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 83.96 | |
| PF14336 | 291 | DUF4392: Domain of unknown function (DUF4392) | 83.04 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-80 Score=623.17 Aligned_cols=459 Identities=60% Similarity=0.962 Sum_probs=423.6
Q ss_pred ccCC-ceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecc
Q 010234 3 LLDG-SVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGL 81 (514)
Q Consensus 3 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~ 81 (514)
..+| ..+|+++..|+.+.+...+|+++|||||++|+++.+. ..+.+..+.+..++...|+||+|+|++|+
T Consensus 511 ~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~---------~~~~~~~l~~~s~~~~~E~~LtFvGlVGi 581 (972)
T KOG0202|consen 511 GSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPG---------QVPDDQDLNDTSNRATAESDLTFVGLVGI 581 (972)
T ss_pred ccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcc---------cChhhhhhcccccccccccceEEEEEeec
Confidence 3444 5699999999999999999999999999999997542 12333445566778899999999999999
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.||+|++++++|+.|+++||+|.|+|||+..+|.++|+++|+.+.+.++....++|++++.+.+++.........+|+|+
T Consensus 582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 582 LDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 99999999999999999999999999999999999999999999888888999999999999999988888889999999
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHH
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~ 241 (514)
+|.+|.++++.||+.++.|+|.|||.||.|+||.||+|||||.+|++++|++||.|+.|+|+..|..+++|||.+|.||+
T Consensus 662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik 741 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIK 741 (972)
T ss_pred CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHH
Q 010234 242 AFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYL 321 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~ 321 (514)
+++.|.++.|+..+...++...++.|.|++|+|+||+|+++|.+|+-+|+++|+|+++|++|||++++++++.|.+++++
T Consensus 742 ~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l 821 (972)
T KOG0202|consen 742 NFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYL 821 (972)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcch
Q 010234 322 VIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKV 401 (514)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (514)
..|++.++.+++++..|+.+. +..+.+.++.+|..|.. .+...+|++|...
T Consensus 822 ~~g~~vg~~Tv~~f~~~~~~~-----------~~~vt~~~~~~~~~c~~----------------~~~~~~c~~F~~~-- 872 (972)
T KOG0202|consen 822 AIGIIVGVATVGVFVWWMYGA-----------DGKVTYRQLAHYNSCCR----------------DFYGSRCAVFEDM-- 872 (972)
T ss_pred HhheeeeeeEhHhhhHHHhcC-----------CCCcChhhhcchhhhcc----------------cccccchhhhccc--
Confidence 999999999999988887531 23345556666666544 1235567777775
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHH
Q 010234 402 KAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIA 481 (514)
Q Consensus 402 ~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~ 481 (514)
...|++|.++++.-+||.+++++..+++|..++|.|+|+.+++.+++.++++++|+|+++..|.+.++++..|++++.+.
T Consensus 873 ~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s 952 (972)
T KOG0202|consen 873 CPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAIS 952 (972)
T ss_pred ccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccC
Q 010234 482 FPVVLIDEVLKFVGRCTN 499 (514)
Q Consensus 482 ~~~~l~~e~~K~~~r~~~ 499 (514)
+..++++|++|++.|+..
T Consensus 953 ~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 953 SPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhHHHHHHHHHHhcc
Confidence 999999999999999764
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-65 Score=563.94 Aligned_cols=450 Identities=66% Similarity=1.084 Sum_probs=385.9
Q ss_pred CCceeeCCHHHHHHHHHHHHHHhh-cCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccC
Q 010234 5 DGSVVPLDHKSRNLILDALHEMST-GALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRD 83 (514)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~ 83 (514)
+|+..|++++.++++.+++++|++ +|+||+++|||.+++++.... ..+.+.++.+|+|++|+|+++++|
T Consensus 467 ~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~----------~~~~~~~~~~e~~l~~lGl~~~~D 536 (917)
T TIGR01116 467 DGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDL----------LSDPANFEAIESDLTFIGVVGMLD 536 (917)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccc----------cccchhhhhhcCCcEEEEEeeeeC
Confidence 488899999999999999999999 999999999999865322110 011234567899999999999999
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
+++++++++|++|+++|++++|+|||+..+|.++|+++|+..++..+....++|.++..+.+++......+..+|+|++|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 99999999999999999999999999999999999999998766554445678888888877666656667789999999
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAF 243 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~ 243 (514)
+||.++++.+|..++.|+|+|||.||++|+++||+||||| ++++.+|++||+++.++++..+.+++++||++++|++++
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~ 695 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQF 695 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHH
Q 010234 244 IRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVI 323 (514)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~ 323 (514)
+.|.+++|+..++..+++.+++.+.|+++.|++|+|++++.+|+++++.+++++++|++||+++.+++++++.+++++..
T Consensus 696 i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~ 775 (917)
T TIGR01116 696 IRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVV 775 (917)
T ss_pred HHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhh
Q 010234 324 GLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKA 403 (514)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (514)
|+++++.+++.|++++....+.+... . . ...|....+ ++.........+
T Consensus 776 g~~~~~~~~~~~~~~~~~~~~~~~~~---~-~---------~~~~~~~~~------------------~~~~~~~~~~~~ 824 (917)
T TIGR01116 776 GVYVGLATVGGFVWWYLLTHFTGCDE---D-S---------FTTCPDFED------------------PDCYVFEGKQPA 824 (917)
T ss_pred HHHHHHHHHHHHHHHHhhcCcccccc---c-c---------ccccccccc------------------ccccccccccch
Confidence 99999887766654432111100000 0 0 000000000 000000012457
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHH
Q 010234 404 MTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFP 483 (514)
Q Consensus 404 ~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~~~ 483 (514)
+|++|.+++++|++|.+++|+++.++|+.++++|++++++++++++++++++|+|+++.+|++.|+++.+|+++++++++
T Consensus 825 ~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~ 904 (917)
T TIGR01116 825 RTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLP 904 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 89999999999999999999998888887888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 010234 484 VVLIDEVLKFVGR 496 (514)
Q Consensus 484 ~~l~~e~~K~~~r 496 (514)
.++++|++|++.|
T Consensus 905 ~~~~~e~~k~~~~ 917 (917)
T TIGR01116 905 VILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-70 Score=549.98 Aligned_cols=475 Identities=32% Similarity=0.530 Sum_probs=419.7
Q ss_pred cccCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecc
Q 010234 2 QLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGL 81 (514)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~ 81 (514)
.+.+|++.|+|++.++.+.+...++.+.|.||++||++.++++++..... .+.+..+.--.++.|+|++++
T Consensus 517 i~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~---------f~~d~~n~p~~nl~FlGl~s~ 587 (1019)
T KOG0203|consen 517 ILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQ---------FDTDDVNFPTDNLRFLGLISM 587 (1019)
T ss_pred eeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceE---------eecCCCCCcchhccccchhhc
Confidence 35789999999999999999999999999999999999998765443322 111222223478999999999
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccc--------------------eecccChHHHh
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDI--------------------SLKSLTGKEFM 141 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~ 141 (514)
-|++|..+++++.+++++||+++|+|||++.+|+++|++.||....... ...+++|.++.
T Consensus 588 idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~ 667 (1019)
T KOG0203|consen 588 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP 667 (1019)
T ss_pred cCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc
Confidence 9999999999999999999999999999999999999999975533221 12346677777
Q ss_pred hhhHHH--HHHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccccccc
Q 010234 142 EMHDKK--AHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLA 219 (514)
Q Consensus 142 ~~~~~~--~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~ 219 (514)
.+..+. +.+......+|+|.+|+||..+++..|..|+.|.+.|||.||.|+||.||+|||||.+|+|+.|++||.++.
T Consensus 668 ~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILL 747 (1019)
T KOG0203|consen 668 DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILL 747 (1019)
T ss_pred ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEe
Confidence 775543 344455678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccc
Q 010234 220 DDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDI 299 (514)
Q Consensus 220 ~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~i 299 (514)
|+++.+++..+++||-+++|++|.+.|.+++|+..+.+.+++.+++.|.|+..+++|++++.+|++|++++++++|+.++
T Consensus 748 DDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDI 827 (1019)
T KOG0203|consen 748 DDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDI 827 (1019)
T ss_pred cCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-CCCCCCcHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccC
Q 010234 300 MKKPPRR-SDDSLISAWIL-FRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVS 377 (514)
Q Consensus 300 m~~~P~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (514)
|+|+||. +.+.+.|.+.+ ..++..|.+++++.++.|+..+...+|.+..+. +...+|++...+
T Consensus 828 M~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~---------------~ir~~W~d~~~~ 892 (1019)
T KOG0203|consen 828 MLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLV---------------GLREDWDDDGVN 892 (1019)
T ss_pred HhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH---------------hhHHhhhhhhhh
Confidence 9999998 78888886554 578899999999999999999999888876543 234567777777
Q ss_pred CCc-CCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHh
Q 010234 378 PFT-AGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILY 456 (514)
Q Consensus 378 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ 456 (514)
.++ ++++.|+++.+.... .+.+|.+|++++++|+++.+.|++|+.|+|.++ ++||.++++++..++++++++|
T Consensus 893 Dl~DsyGQeWtyeqRk~le-----~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqG-mrN~vl~f~v~~e~~La~fl~y 966 (1019)
T KOG0203|consen 893 DLTDSYGQEWTYEQRKYLE-----YTCYTAFFISIVVVQWADLIICKTRRNSIFQQG-MRNKVLIFAVIFETCLACFLCY 966 (1019)
T ss_pred hhhhhccccccHHHHHHHH-----HhhhhheeeeehHHhHhhHHhhhcchhHHHHhh-hhhhhHHHHHHHHHHHHHHHhc
Confidence 776 778888775554322 457889999999999999999999999999988 7999999999999999999999
Q ss_pred ccccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCccccc
Q 010234 457 VPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGRCTNGSQTSRR 506 (514)
Q Consensus 457 ip~~~~~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K~~~r~~~~~~~~~~ 506 (514)
.|++...++..|+.+.+|+..++.+++++++||++|++.|+++..|..|.
T Consensus 967 ~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~gw~e~e 1016 (1019)
T KOG0203|consen 967 CPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPGGWLEKE 1016 (1019)
T ss_pred CccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCCchhhhh
Confidence 99999999999999999999999999999999999999999999998763
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-65 Score=563.06 Aligned_cols=445 Identities=30% Similarity=0.511 Sum_probs=376.1
Q ss_pred ceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCC
Q 010234 7 SVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPR 86 (514)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~ 86 (514)
+++++++++++++.+.+++|+++|+||||+|||.+++++...+ ..+ . +..+.+.+|+||+|+|+++++|++|
T Consensus 577 ~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~---~---~~~~~~~~e~~L~~~G~~~~~Dp~r 648 (1053)
T TIGR01523 577 KISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLK---N---ETLNRATAESDLEFLGLIGIYDPPR 648 (1053)
T ss_pred ccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhh---c---cccchhhhccCCEEEEEEeeecCCc
Confidence 5679999999999999999999999999999999876432110 000 0 0112346789999999999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcc------ceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 87 NEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNED------ISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 87 ~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
++++++|++|+++||+++|+|||+..+|.++|+++|+...+.. ....+++|.++..+.+.+.........+|+|
T Consensus 649 ~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar 728 (1053)
T TIGR01523 649 NESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIAR 728 (1053)
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEe
Confidence 9999999999999999999999999999999999999754211 1235788999888876655555556789999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNM 240 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i 240 (514)
++|+||.++++.+|..++.|+|+|||.||+|||+.||+|||||.++++.+|++||+++.++++..+..++++||++++|+
T Consensus 729 ~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni 808 (1053)
T TIGR01523 729 CAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNI 808 (1053)
T ss_pred cCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc----C-CCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHH
Q 010234 241 KAFIRYMISSNIGEVASIFFTAALG----I-PEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAW 315 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~ 315 (514)
++++.|.+++|+..+++.+++.+++ . +.|+++.|++|+|++++.+|+++++++|+++++|++||+.+.++++++.
T Consensus 809 ~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~ 888 (1053)
T TIGR01523 809 MKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKE 888 (1053)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHH
Confidence 9999999999999999998888874 2 4689999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCc
Q 010234 316 ILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDY 395 (514)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (514)
.+.+++..|++.++.+++.|++++.. + + ..... ..|..+.+ .++.
T Consensus 889 ~~~~~~~~g~~~~~~~l~~~~~~~~~--~-~--~~~~~------------~~~~~~~~-----------------~~~~- 933 (1053)
T TIGR01523 889 LIIDMFAYGFFLGGSCLASFTGILYG--F-G--SGNLG------------HDCDAHYH-----------------AGCN- 933 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--c-c--Ccccc------------cccccccc-----------------cccc-
Confidence 88889999999988887777644321 0 0 00000 01111000 0000
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccC---------------CCcchHHHHHHHHHHHHHHHHHhcccc
Q 010234 396 FHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMP---------------PWVNPWLLLAMSVSFGLHFLILYVPFL 460 (514)
Q Consensus 396 ~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~---------------~~~N~~~~~~~~~~~~l~~~~~~ip~~ 460 (514)
....++|++|.+++++|+++.+++|+++.++|+.+ .++|++++++++++++++++++|+|++
T Consensus 934 ---~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~ 1010 (1053)
T TIGR01523 934 ---DVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVI 1010 (1053)
T ss_pred ---chhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 01457999999999999999999999988888653 679999999999999999999999999
Q ss_pred cc-ccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010234 461 AQ-IFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGRCT 498 (514)
Q Consensus 461 ~~-~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K~~~r~~ 498 (514)
+. +|++.|+++ .|+++++++++.++++|++|++.|+.
T Consensus 1011 ~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1011 NDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred hhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 86 999999996 89999999999999999999987655
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-65 Score=564.21 Aligned_cols=472 Identities=28% Similarity=0.476 Sum_probs=381.9
Q ss_pred cCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccC
Q 010234 4 LDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRD 83 (514)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~ 83 (514)
.+|++.+++++.++.+.+++++|+++|+||+++|||.++++++..... .+.++.+.+|+||+|+|+++++|
T Consensus 497 ~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~---------~~~~~~~~~e~~L~flGli~i~D 567 (997)
T TIGR01106 497 IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQ---------FDTDDVNFPTDNLCFVGLISMID 567 (997)
T ss_pred cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccccc---------ccchhhhccccCcEEEEEEeccC
Confidence 578889999999999999999999999999999999987643321100 01122234589999999999999
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcc--------------------ceecccChHHHhhh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNED--------------------ISLKSLTGKEFMEM 143 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~ 143 (514)
++|++++++|++|+++|++++|+|||+..++.++++++|+...+.. -...+++|.++..+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 9999999999999999999999999999999999999999654321 01247788888887
Q ss_pred hHHHHHH--hhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCC
Q 010234 144 HDKKAHL--RQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD 221 (514)
Q Consensus 144 ~~~~~~~--~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~ 221 (514)
.+++... ......+|+|++|+||.++++.+|..++.|+|+|||.||+|||++||+|||||++|+|.+|++||+++.++
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd 727 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDD 727 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecC
Confidence 6654332 22334699999999999999999999999999999999999999999999999889999999999999999
Q ss_pred CchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccC
Q 010234 222 DFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMK 301 (514)
Q Consensus 222 ~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~ 301 (514)
++..+.+++++||+++.|+++++.|.++.|+..+++.+++.+++.|+|++++|++|+|+++|.+|+++++.+|+++++|+
T Consensus 728 ~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~ 807 (997)
T TIGR01106 728 NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMK 807 (997)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-CCCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCC
Q 010234 302 KPPRRS-DDSLISAWILFRY-LVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPF 379 (514)
Q Consensus 302 ~~P~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (514)
+||+++ ...+++.+.+..+ +..|+++++..++++++.+...++.+..... ....|.+...+++
T Consensus 808 ~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~---------------~~~~~~~~~~~~~ 872 (997)
T TIGR01106 808 RQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVG---------------LRVQWDDRWINDL 872 (997)
T ss_pred CCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccc---------------ccccccccccccc
Confidence 999985 6788888776654 4568888887776666544222221110000 0000100000000
Q ss_pred cC-CCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhcc
Q 010234 380 TA-GNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVP 458 (514)
Q Consensus 380 ~~-~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip 458 (514)
+. .+..+....+ ......++|++|.+++++|+++.++||+++.++|+.+ +.|++++++++++++++++++|+|
T Consensus 873 ~~~~~~~~~~~~~-----~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~-~~n~~l~~~~~~~~~l~~~~~~~p 946 (997)
T TIGR01106 873 EDSYGQEWTYEQR-----KYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQG-MKNKILIFGLFEETALAAFLSYCP 946 (997)
T ss_pred ccccccccchhcc-----cchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccC-CcCHHHHHHHHHHHHHHHHHHHhh
Confidence 00 0000000000 0001247899999999999999999999888888766 799999999999999999999999
Q ss_pred ccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccc
Q 010234 459 FLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGRCTNGSQTSR 505 (514)
Q Consensus 459 ~~~~~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K~~~r~~~~~~~~~ 505 (514)
+++.+|++.++++.+|+++++++++.++++|++|++.|++..+|..|
T Consensus 947 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~ 993 (997)
T TIGR01106 947 GMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRNPGGWVEK 993 (997)
T ss_pred hhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchhhH
Confidence 99999999999999999999999999999999999998876666543
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-66 Score=521.47 Aligned_cols=429 Identities=34% Similarity=0.532 Sum_probs=374.1
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEeccc
Q 010234 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLR 82 (514)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 82 (514)
..+|+..+++++.+..+++.++.||++|||++|+|||+..+.... ..+.++.+..+.+++++|++|++
T Consensus 578 ~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~------------~~~~~~~~~~~~~lt~laivGIk 645 (1034)
T KOG0204|consen 578 DSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDE------------EPSWDNEELPEGGLTLLAIVGIK 645 (1034)
T ss_pred CCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCC------------CCCccccccCCCCeEEEEEeecc
Confidence 468999999999999999999999999999999999986554110 01223345668999999999999
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
||+|||++++|+.|+++||.|-|+|||+..+|+++|.+|||..++.+ ...+.|.++.++.+++.....++-.+++|++
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pkl~VlARSS 723 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFRELSQEERDKIWPKLRVLARSS 723 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhhhcCHHHHHhhhhhheeeecCC
Confidence 99999999999999999999999999999999999999999887765 5789999999999999888888899999999
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKA 242 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~ 242 (514)
|.+|.-+++.+++.++.|++.|||.||.|+|+.||+|.|||.+|+|++|+++|+++.|+|+.+|+.++++||+.|.+++|
T Consensus 724 P~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqK 803 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQK 803 (1034)
T ss_pred CchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHH
Q 010234 243 FIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLV 322 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~ 322 (514)
+++|.++-|+..+...|+.++....+|++.+|+||+|+++|.+.+++|+.+||.+++|+|+|..+.++++++-++..++.
T Consensus 804 FiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~ 883 (1034)
T KOG0204|consen 804 FLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILG 883 (1034)
T ss_pred hheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877666777
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchh
Q 010234 323 IGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVK 402 (514)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (514)
+++++-+..+.+. +.+..+++. ++ +. + + ....
T Consensus 884 qa~YQl~vl~iL~---F~G~~if~~----~~-------~~-~-------------------------~--------~~~~ 915 (1034)
T KOG0204|consen 884 QAVYQLIVLFILN---FAGKSIFGL----NG-------PL-H-------------------------S--------PPSV 915 (1034)
T ss_pred HHHHHHHHHHHHH---hcchhhhcc----CC-------CC-C-------------------------C--------chhh
Confidence 8888755443322 222111110 00 00 0 0 0134
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHH
Q 010234 403 AMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAF 482 (514)
Q Consensus 403 ~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~~ 482 (514)
..|+.|.+|+++|+||.++.|.....-...+.++|++|+..+...+++|++++. +...+|+++++++.+|++|+.+++
T Consensus 916 ~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIve--F~g~~~st~~L~~~qWl~ci~~g~ 993 (1034)
T KOG0204|consen 916 HNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVE--FGGAFFSTTPLSLTQWLWCIFIGV 993 (1034)
T ss_pred heeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhh--hcCcceeeecccHHHHHHHHHHHH
Confidence 568999999999999999999876443445888999999999999999987654 467779999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 010234 483 PVVLIDEVLKFVG 495 (514)
Q Consensus 483 ~~~l~~e~~K~~~ 495 (514)
+.+.+..+.|.+-
T Consensus 994 ~sl~~g~~ik~iP 1006 (1034)
T KOG0204|consen 994 LSLPWGQLLKCIP 1006 (1034)
T ss_pred HHHHHHHHheecc
Confidence 9999999999764
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-61 Score=529.97 Aligned_cols=406 Identities=39% Similarity=0.678 Sum_probs=368.3
Q ss_pred CCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCC
Q 010234 5 DGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDP 84 (514)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~ 84 (514)
+|...+++++.++++.+.+++++++|+||+++|||.+ +++++|+|+++++|+
T Consensus 477 ~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------------------~~~l~~lGli~l~Dp 528 (884)
T TIGR01522 477 DGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------------------KGQLTFLGLVGINDP 528 (884)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------------------CCCeEEEEEEeccCc
Confidence 4777889999999999999999999999999999963 367999999999999
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPR 164 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 164 (514)
++|+++++|++|+++|++++|+|||+..+|.++|+++|+...... .++|+++..+.+++......+..+|+|++|+
T Consensus 529 ~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~----~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 529 PRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ----SVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred chhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc----eeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 999999999999999999999999999999999999999765432 4678888887776655556678899999999
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHH
Q 010234 165 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFI 244 (514)
Q Consensus 165 ~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~ 244 (514)
+|.++++.+|..++.|+|+|||.||++|+++||+|||||.++++.++++||+++.++++..+.+++++||++++|+++++
T Consensus 605 ~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i 684 (884)
T TIGR01522 605 HKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFI 684 (884)
T ss_pred HHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999977999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHHH
Q 010234 245 RYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIG 324 (514)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~~ 324 (514)
.|.++.|+..++..+++.+++.+.|+++.|++|+|++++.+|+++++.+|+++++|++||+++.++++++..+..++.+|
T Consensus 685 ~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g 764 (884)
T TIGR01522 685 TFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSA 764 (884)
T ss_pred HHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHH
Confidence 99999999999888889999999999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhH
Q 010234 325 LYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAM 404 (514)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (514)
++.++..++.|+..+. .+ .....++
T Consensus 765 ~~~~~~~~~~~~~~~~-----------~~--------------------------------------------~~~~~~~ 789 (884)
T TIGR01522 765 IIIVVGTLFVFVREMQ-----------DG--------------------------------------------VITARDT 789 (884)
T ss_pred HHHHHHHHHHHHHHHc-----------CC--------------------------------------------cchhhHH
Confidence 8877665444332110 00 0002468
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHH
Q 010234 405 TLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPV 484 (514)
Q Consensus 405 t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~~~~ 484 (514)
|++|.+++++|++|.+++|+++.+.|+.++++|++++++++++++++++++|+|+++.+|++.|+++.+|+++++++++.
T Consensus 790 t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~ 869 (884)
T TIGR01522 790 TMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSV 869 (884)
T ss_pred HHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999988889888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 010234 485 VLIDEVLKFVGRC 497 (514)
Q Consensus 485 ~l~~e~~K~~~r~ 497 (514)
+++.|++|++.|+
T Consensus 870 ~~~~~~~k~~~~~ 882 (884)
T TIGR01522 870 CIVDEIRKKVERS 882 (884)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-61 Score=531.67 Aligned_cols=421 Identities=32% Similarity=0.546 Sum_probs=364.1
Q ss_pred cCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccC
Q 010234 4 LDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRD 83 (514)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~ 83 (514)
.+|++.++++ .++++.+.+++++++|+||+++|||.++.++.. ..+..|+|++|+|+++++|
T Consensus 517 ~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~-----------------~~~~~e~~l~~lGli~~~D 578 (941)
T TIGR01517 517 SNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFP-----------------RKDYPNGGLTLIGVVGIKD 578 (941)
T ss_pred cCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccc-----------------cccccccCcEEEEEeeccC
Confidence 4677778887 789999999999999999999999987643211 0123478999999999999
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++||+++++|++|+++|++++|+|||+..+|.++|+++|+...+. .+++|+++..+.+++......+..+|+|++|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~----~vi~G~~~~~l~~~el~~~i~~~~Vfar~sP 654 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG----LAMEGKEFRRLVYEEMDPILPKLRVLARSSP 654 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc----eEeeHHHhhhCCHHHHHHHhccCeEEEECCH
Confidence 999999999999999999999999999999999999999976543 3678888888877665555566789999999
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAF 243 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~ 243 (514)
+||.++++.+|+.++.|+|+|||.||+|||++||+|||||.+++|.+|++||+++.++++..+..++++||+++.|++++
T Consensus 655 e~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~ 734 (941)
T TIGR01517 655 LDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKF 734 (941)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHH
Q 010234 244 IRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVI 323 (514)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~ 323 (514)
+.|.+++|+..++..+++.+++.++|+++.|++|+|++++.+|+++++.++|++++|++||+++.++++++.++.+++.+
T Consensus 735 i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~ 814 (941)
T TIGR01517 735 LQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQ 814 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHH
Confidence 99999999999999999889989999999999999999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhh
Q 010234 324 GLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKA 403 (514)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (514)
++++++..++.++.... +++.. .. ..|. + .....+
T Consensus 815 ~~~~~~~~~~~~~~~~~---~~~~~---~~------------~~~~-------------------------~--~~~~~~ 849 (941)
T TIGR01517 815 AGYQLVVTFILLFAGGS---IFDVS---GP------------DEIT-------------------------S--HQQGEL 849 (941)
T ss_pred HHHHHHHHHHHHHHHHh---hhccc---Cc------------cccc-------------------------c--cccchh
Confidence 98887776655443210 11000 00 0000 0 001347
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCC-CccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHH
Q 010234 404 MTLSLSVLVAIEMFNSLNALSEDG-SLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAF 482 (514)
Q Consensus 404 ~t~~f~~lv~~~~~~~~~~~~~~~-s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~~ 482 (514)
+|++|.+++++|+++.+++|+.+. ++|+ ++++|++++++++++++++++ ++|+++.+|++.++++.+|++++++++
T Consensus 850 ~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~l~~~--~~~~~~~~f~~~~l~~~~w~~~~~~~~ 926 (941)
T TIGR01517 850 NTIVFNTFVLLQLFNEINARKLYERNVFE-GLFKNRIFVTIMGFTFGFQVI--IVEFGGSFFSTVSLSIEQWIGCVLLGM 926 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHccCCcccccc-cccccHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 899999999999999999998765 4555 888999999999998888865 446788999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 010234 483 PVVLIDEVLKFV 494 (514)
Q Consensus 483 ~~~l~~e~~K~~ 494 (514)
+.+++.|+.|++
T Consensus 927 ~~~~~~~~~~~~ 938 (941)
T TIGR01517 927 LSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHhc
Confidence 999999999986
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-59 Score=511.73 Aligned_cols=415 Identities=24% Similarity=0.362 Sum_probs=346.3
Q ss_pred cCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccC
Q 010234 4 LDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRD 83 (514)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~ 83 (514)
.+|++.+++++.++++.+.+++++++|+||+++|||.++.++... ...+..|+|++|+|+++++|
T Consensus 485 ~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~---------------~~~~~~e~~l~~lGli~l~D 549 (903)
T PRK15122 485 DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA---------------QYSTADERDLVIRGFLTFLD 549 (903)
T ss_pred cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc---------------ccccccccCcEEEEEEeccC
Confidence 457778999999999999999999999999999999875432100 01123478999999999999
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++||+++++|++|+++||+++|+|||+..+|.++|+++|+... ..++|.++..+.+++......+..+|+|.+|
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~------~vi~G~el~~~~~~el~~~v~~~~VfAr~sP 623 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG------EPLLGTEIEAMDDAALAREVEERTVFAKLTP 623 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC------CccchHhhhhCCHHHHHHHhhhCCEEEEeCH
Confidence 9999999999999999999999999999999999999999532 3578999998887766666666789999999
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAF 243 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~ 243 (514)
+||.++++.+|..++.|+|+|||.||+|+|++||+||||| +++|++|++||+|+.++++..+.+++++||++++|++++
T Consensus 624 e~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~ 702 (903)
T PRK15122 624 LQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKY 702 (903)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHH
Q 010234 244 IRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVI 323 (514)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~ 323 (514)
+.|.++.|+..++..++..++..+.|+++.|++|+|+++|. |+++++.+|+++++| +||++++.+++++..++ .
T Consensus 703 i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~----~ 776 (903)
T PRK15122 703 LNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLW----I 776 (903)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHH----H
Confidence 99999999999888877777766689999999999999995 999999999999999 99999999999874433 3
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhh
Q 010234 324 GLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKA 403 (514)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (514)
|...+++.++.+++.+.. +.. +.. ......
T Consensus 777 g~~~~~~~~~~~~~~~~~---~~~-----~~~------------------------------------------~~~~~~ 806 (903)
T PRK15122 777 GPTSSIFDITTFALMWFV---FAA-----NSV------------------------------------------EMQALF 806 (903)
T ss_pred HHHHHHHHHHHHHHHHHH---hcc-----CcH------------------------------------------hhhhhh
Confidence 333333333333221100 000 000 000113
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccc--cccccccccCChhhHHHHHHHH
Q 010234 404 MTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPF--LAQIFGIVPLSFNEWLLVLAIA 481 (514)
Q Consensus 404 ~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~--~~~~f~~~~l~~~~w~~~l~~~ 481 (514)
+|..|.+++++|+++.+++|+++.+ +|.|++.+..++++++++++++++|+ ++.+|++.++++.+|+++++.+
T Consensus 807 ~t~~f~~l~~~q~~~~~~~R~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~ 881 (903)
T PRK15122 807 QSGWFIEGLLSQTLVVHMLRTQKIP-----FIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATL 881 (903)
T ss_pred HHHHHHHHHHHHHHHHHhhCcCCCC-----cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 5778999999999999999987543 44577777888889999999999997 8899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCC
Q 010234 482 FPVVLIDEVLKFVGRCTNGS 501 (514)
Q Consensus 482 ~~~~l~~e~~K~~~r~~~~~ 501 (514)
++.+++.|+.|.+..+..+.
T Consensus 882 ~~~~~~~e~~k~~~~r~~~~ 901 (903)
T PRK15122 882 LGYCLVAQGMKRFYIRRFGQ 901 (903)
T ss_pred HHHHHHHHHHHHHHhhhccc
Confidence 99999999988554444333
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-60 Score=517.30 Aligned_cols=423 Identities=39% Similarity=0.632 Sum_probs=363.3
Q ss_pred CceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCC
Q 010234 6 GSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPP 85 (514)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l 85 (514)
|+..+++++.++.+.+..++|+++|+||+++|||.+++++.. .+. +++|+|++|+|+++++||+
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~---------------~~~-~~~E~dl~~lGl~g~~Dpp 548 (917)
T COG0474 485 GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD---------------DEV-DEIESDLVFLGLTGIEDPP 548 (917)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc---------------chh-hhhhccceeehhhhccCCC
Confidence 667789999999999999999999999999999976543211 111 5779999999999999999
Q ss_pred ChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhh
Q 010234 86 RNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRH 165 (514)
Q Consensus 86 ~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~ 165 (514)
|++++++|+.|+++||+++|+|||+..+|.++|+++|+..+... ..+++|.++..+.+++......+..+|||++|+|
T Consensus 549 r~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~--~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~q 626 (917)
T COG0474 549 REDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES--ALVIDGAELDALSDEELAELVEELSVFARVSPEQ 626 (917)
T ss_pred CccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc--eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHH
Confidence 99999999999999999999999999999999999998765443 4578999999998876555555566999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHH
Q 010234 166 KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIR 245 (514)
Q Consensus 166 k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~ 245 (514)
|.++++.+|+.++.|+|+|||.||+||||+||+|||||.+|+|++|++||+++.++++..+..+++|||++|.|+++++.
T Consensus 627 K~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~ 706 (917)
T COG0474 627 KARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFIL 706 (917)
T ss_pred HHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHH-
Q 010234 246 YMISSNIGEVASIFFTAALGIP-EGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVI- 323 (514)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~- 323 (514)
|.+++|+..++..+++.+++.+ .|+++.|++|+|++++.+|+++++.++++.+.|++||+++..++++.+.++++++.
T Consensus 707 ~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~ 786 (917)
T COG0474 707 YLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILII 786 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHH
Confidence 9999999999999999888888 89999999999999999999999999999999999999999999999999996554
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhh
Q 010234 324 GLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKA 403 (514)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (514)
+...++..++.|.+++...... ..+. .. .....
T Consensus 787 ~~~~~i~~~~~~~~~~~~~~~~-----~~~~-------------------------------------~~-----~~~~~ 819 (917)
T COG0474 787 GLLSAILFILTFLLYLLGFIAN-----TLGL-------------------------------------DL-----FQALL 819 (917)
T ss_pred HHHHHHHHHHHHHHHHHhcccc-----ccch-------------------------------------hh-----HHHHH
Confidence 5555554444444433210000 0000 00 12557
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccc-cccccccCChhhHHHHHHHH-
Q 010234 404 MTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLA-QIFGIVPLSFNEWLLVLAIA- 481 (514)
Q Consensus 404 ~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~-~~f~~~~l~~~~w~~~l~~~- 481 (514)
++++|..+++.|.++.+.+++.+.+.+...++.|+.++.++++.++++++..+.|... ..|...+++...|++++++.
T Consensus 820 ~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 899 (917)
T COG0474 820 QTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVAL 899 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHH
Confidence 8999999999999999999999888888788899999999999999999999999888 79999999988899877776
Q ss_pred -HHHHHHHHHHHH
Q 010234 482 -FPVVLIDEVLKF 493 (514)
Q Consensus 482 -~~~~l~~e~~K~ 493 (514)
...+...+..|.
T Consensus 900 ~~~~~~~~~~~~~ 912 (917)
T COG0474 900 LLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHHHHHHHH
Confidence 344444454444
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=490.80 Aligned_cols=412 Identities=25% Similarity=0.365 Sum_probs=336.6
Q ss_pred cCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccC
Q 010234 4 LDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRD 83 (514)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~ 83 (514)
.+|++.+++++.++++.+.+++++++|+||+++|||+++.++.. .+ ...|+|++|+|+++++|
T Consensus 487 ~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~----------------~~-~~~e~~l~~lGli~~~D 549 (902)
T PRK10517 487 HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD----------------YQ-RADESDLILEGYIAFLD 549 (902)
T ss_pred cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccc----------------cc-cccccCceeeehHhhhC
Confidence 46778899999999999999999999999999999987542210 00 11278999999999999
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++||+++++|++|+++||+++|+|||+..+|.++|+++|+... .+++|.+++.+.+++......+..+|+|.+|
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~------~v~~G~el~~l~~~el~~~~~~~~VfAr~sP 623 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG------EVLIGSDIETLSDDELANLAERTTLFARLTP 623 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc------CceeHHHHHhCCHHHHHHHHhhCcEEEEcCH
Confidence 9999999999999999999999999999999999999999532 3678899988877766555566789999999
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAF 243 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~ 243 (514)
+||.++++.+|..++.|+|+|||.||+|+|++||+||||| +++|++|++||+|+.++++..+.+++++||+++.|++++
T Consensus 624 e~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~ 702 (902)
T PRK10517 624 MHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702 (902)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHH
Q 010234 244 IRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVI 323 (514)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~ 323 (514)
+.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|+++++.+|+++++|++||+. +.+. ....++..
T Consensus 703 i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~~~~----~~~~~~~~ 776 (902)
T PRK10517 703 IKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-NPAD----LGRFMVFF 776 (902)
T ss_pred HHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-CHHH----HHHHHHHH
Confidence 9999999999998888877775557999999999999999 6899999999999999998872 2211 22334556
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhh
Q 010234 324 GLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKA 403 (514)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (514)
|.+.+++.++.|++.+.. ++. ... ......
T Consensus 777 g~~~~~~~~~~~~~~~~~---~~~---~~~--------------------------------------------~~~~~~ 806 (902)
T PRK10517 777 GPISSIFDILTFCLMWWV---FHA---NTP--------------------------------------------ETQTLF 806 (902)
T ss_pred HHHHHHHHHHHHHHHHHH---ccc---cch--------------------------------------------hhHhHH
Confidence 666555554444432210 000 000 000113
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhcc--ccccccccccCC--hhhHHHHHH
Q 010234 404 MTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVP--FLAQIFGIVPLS--FNEWLLVLA 479 (514)
Q Consensus 404 ~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip--~~~~~f~~~~l~--~~~w~~~l~ 479 (514)
++..|.+++++|+++.+++|+++. ++|.|++.+.+++.+++++++.+++| +++.+|++.+++ +..|+++++
T Consensus 807 ~~~~F~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 881 (902)
T PRK10517 807 QSGWFVVGLLSQTLIVHMIRTRRI-----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAIL 881 (902)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCC-----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHH
Confidence 445599999999999999998644 45678899999999999999999999 789999999999 567777666
Q ss_pred HHHHHHHHHHHHHHHhhccCCCcc
Q 010234 480 IAFPVVLIDEVLKFVGRCTNGSQT 503 (514)
Q Consensus 480 ~~~~~~l~~e~~K~~~r~~~~~~~ 503 (514)
+++. +..|+.|....+... ||
T Consensus 882 ~~~~--~~~e~~K~~~~~~~~-~~ 902 (902)
T PRK10517 882 AGYM--TLTQLVKGFYSRRYG-WQ 902 (902)
T ss_pred HHHH--HHHHHHHHHHHHhhc-CC
Confidence 6555 567887765443333 54
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-56 Score=486.61 Aligned_cols=409 Identities=26% Similarity=0.374 Sum_probs=334.2
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEeccc
Q 010234 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLR 82 (514)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 82 (514)
..+|.+.+++++.++++.+.+++++++|+||+++|||+++.++.. . .++.|++++|+|+++++
T Consensus 451 ~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------------~~~~e~~l~~lGli~l~ 513 (867)
T TIGR01524 451 RFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F----------------TKTDEEQLIIEGFLGFL 513 (867)
T ss_pred hcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c----------------cccccCCcEEEEEEEee
Confidence 346778899999999999999999999999999999987653210 0 01126899999999999
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
|++||+++++|++|+++||+++|+|||+..+|.++|+++|+... ..++|.++..+.+.+......+..+|+|.+
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~------~v~~g~~l~~~~~~el~~~~~~~~vfAr~~ 587 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN------DFLLGADIEELSDEELARELRKYHIFARLT 587 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC------CeeecHhhhhCCHHHHHHHhhhCeEEEECC
Confidence 99999999999999999999999999999999999999999642 356788888877666555556678999999
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKA 242 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~ 242 (514)
|+||.++++.+|..++.|+|+|||.||+|+|++||+||||| +++|++|++||+|+.++++..+..++++||++++|+++
T Consensus 588 Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k 666 (867)
T TIGR01524 588 PMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILK 666 (867)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHH
Q 010234 243 FIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLV 322 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~ 322 (514)
++.|.++.|+..++..+++.++..+.|+++.|++|+|+++| +|+++++.+|+++++|++||+ ++.+.+ ...++.
T Consensus 667 ~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~----~~~~~~ 740 (867)
T TIGR01524 667 YLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGM----GRFMLC 740 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhH----HHHHHH
Confidence 99999999999988888877776668999999999999999 799999999999999986665 555322 233444
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchh
Q 010234 323 IGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVK 402 (514)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (514)
.|.+.++..+..+++.+... .. .+ . .....
T Consensus 741 ~g~~~~~~~~~~~~~~~~~~---~~----~~-~------------------------------------------~~~~~ 770 (867)
T TIGR01524 741 IGPVSSIFDIATFLLMWFVF---SA----NT-V------------------------------------------EEQAL 770 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHh---cc----cc-h------------------------------------------hhhhH
Confidence 56555544444443322100 00 00 0 00012
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccc--cccccccccCCh--hhHHHHH
Q 010234 403 AMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPF--LAQIFGIVPLSF--NEWLLVL 478 (514)
Q Consensus 403 ~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~--~~~~f~~~~l~~--~~w~~~l 478 (514)
.+|..|.+++++|+++.+++|+++. ++|.|++.+.+++++++++++++++|+ ++.+|++.++|+ ..|++++
T Consensus 771 ~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~ 845 (867)
T TIGR01524 771 FQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAI 845 (867)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHH
Confidence 4678899999999999999998754 345689999999999999999999997 488999998854 4576666
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 010234 479 AIAFPVVLIDEVLKFVGRCT 498 (514)
Q Consensus 479 ~~~~~~~l~~e~~K~~~r~~ 498 (514)
+++++ ++.|+.|.+..+.
T Consensus 846 ~~~~~--~~~e~~k~~~~~~ 863 (867)
T TIGR01524 846 LVGYM--ATMQLVKTFYIRR 863 (867)
T ss_pred HHHHH--HHHHHHHHHHHHh
Confidence 65554 6678887654433
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-51 Score=456.00 Aligned_cols=394 Identities=24% Similarity=0.291 Sum_probs=309.8
Q ss_pred HHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHH
Q 010234 14 KSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAI 93 (514)
Q Consensus 14 ~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I 93 (514)
+.++++.+.+++|+++|+||+|+|||++++...... ...+++++|+||+|+|+++++|++||+++++|
T Consensus 598 ~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~------------~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I 665 (1054)
T TIGR01657 598 TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKA------------QDLSRDAVESNLTFLGFIVFENPLKPDTKEVI 665 (1054)
T ss_pred CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhh------------hhccHHHHhcCceEEEEEEEecCCCccHHHHH
Confidence 346778899999999999999999999863211100 01234678999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccc-------------------------------------------
Q 010234 94 EDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDI------------------------------------------- 130 (514)
Q Consensus 94 ~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~------------------------------------------- 130 (514)
++|+++||+++|+|||+..+|.++|+++|+..++..+
T Consensus 666 ~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (1054)
T TIGR01657 666 KELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVE 745 (1054)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchh
Confidence 9999999999999999999999999999996543211
Q ss_pred ------eecccChHHHhhhhH---HHHHHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 131 ------SLKSLTGKEFMEMHD---KKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 131 ------~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
...+++|+++..+.+ +.......+..+|+|++|+||.++++.+|..++.|+|+|||.||++|||+||+|||
T Consensus 746 ~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIa 825 (1054)
T TIGR01657 746 DLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGIS 825 (1054)
T ss_pred hhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCccee
Confidence 123556666655422 12222234567999999999999999999999999999999999999999999999
Q ss_pred eCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHH
Q 010234 202 MGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLV 281 (514)
Q Consensus 202 mg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 281 (514)
||++ | +..+||++..++++.++.++|++||+++.++.++++|.+.+++...+..++..+ ...++++.|++|+|++
T Consensus 826 m~~~--d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~l~~~Q~l~i~li 900 (1054)
T TIGR01657 826 LSEA--E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYL--IGSNLGDGQFLTIDLL 900 (1054)
T ss_pred eccc--c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccCcCccHHHHHHHHH
Confidence 9943 3 357899999999999999999999999999999999999999988666554433 4478999999999999
Q ss_pred hhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccc
Q 010234 282 TDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQ 361 (514)
Q Consensus 282 ~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (514)
++.+++++++.++|.+++|+++| .++++++..+.+++.+++++.+..++.+.+...+.++.+....
T Consensus 901 ~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~----------- 966 (1054)
T TIGR01657 901 LIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPV----------- 966 (1054)
T ss_pred HHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCC-----------
Confidence 99999999999999999999988 4789999999999999999988887776654433222110000
Q ss_pred cccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHH
Q 010234 362 LTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLL 441 (514)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~ 441 (514)
+ ....+ .....+|++|.+.. .|.+..+.+++. +++|+.+.++|++++
T Consensus 967 ---------------~--------------~~~~~--~~~~~~T~~f~~~~-~~~~~~~~~~~~-g~pf~~~~~~N~~~~ 1013 (1054)
T TIGR01657 967 ---------------D--------------LEKEN--FPNLLNTVLFFVSS-FQYLITAIVNSK-GPPFREPIYKNKPFV 1013 (1054)
T ss_pred ---------------C--------------ccccc--CccHHHHHHHHHHH-HHHHHheEEEcC-CcchhhhHHHhHHHH
Confidence 0 00000 01235788884444 455555556654 889999999999998
Q ss_pred HHHHHHHHHHHH--HHhccccccccccccCCh
Q 010234 442 LAMSVSFGLHFL--ILYVPFLAQIFGIVPLSF 471 (514)
Q Consensus 442 ~~~~~~~~l~~~--~~~ip~~~~~f~~~~l~~ 471 (514)
+++++.+++++. +.++|.++..|++++++.
T Consensus 1014 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 1014 YLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred HHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 888887776653 336788999999999985
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-50 Score=452.87 Aligned_cols=433 Identities=21% Similarity=0.273 Sum_probs=321.4
Q ss_pred HHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCc-----cccccCCcEEEEEecccCCCCh
Q 010234 13 HKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSN-----YASMECGLTFVGLVGLRDPPRN 87 (514)
Q Consensus 13 ~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~e~~l~~lG~~~~~~~l~~ 87 (514)
++.++.+.+++++|+++|+||+++|||.++++++..+.+++++++..+.++++ ++++|+||+|+|+++++|++++
T Consensus 555 ~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~ 634 (1057)
T TIGR01652 555 NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQE 634 (1057)
T ss_pred hhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhh
Confidence 45678899999999999999999999999987766555555555554443322 4678999999999999999999
Q ss_pred hHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccce------------------------------------
Q 010234 88 EVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDIS------------------------------------ 131 (514)
Q Consensus 88 ~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~------------------------------------ 131 (514)
+++++|++|+++||++||+|||+.++|..+|+++|+.+.+..+.
T Consensus 635 ~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 714 (1057)
T TIGR01652 635 GVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGN 714 (1057)
T ss_pred ccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCc
Confidence 99999999999999999999999999999999999976543211
Q ss_pred -ecccChHHHhhhhHHH------HHHhhcCceEEEecChhhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 132 -LKSLTGKEFMEMHDKK------AHLRQSGGLLFSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 132 -~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~p~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
..+++|+++..+.+.. .....+..+++||++|+||.++++.+|.. ++.|+|+|||.||++||++||+||++
T Consensus 715 ~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi- 793 (1057)
T TIGR01652 715 VALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI- 793 (1057)
T ss_pred eEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe-
Confidence 1355666665443321 12234556799999999999999999998 89999999999999999999999976
Q ss_pred CCCcH--HHHhcccccccCCCchhHHHHH-HHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---chhHHHHHH
Q 010234 204 IAGTE--VAKEASDMVLADDDFSTIVSAV-GEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPE---GLIPVQLLW 277 (514)
Q Consensus 204 ~~~~~--~~k~~ad~v~~~~~~~~i~~~i-~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~ 277 (514)
.+.+ .++.+||+++.+ +..+..++ .|||++|.|+++.+.|.+++|+.+++.++++.++..++ ++.+++++|
T Consensus 794 -~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 -SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred -cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4455 689999999974 88888876 89999999999999999999999999999988876654 477889999
Q ss_pred HHHHhhhhhhccccc--CCCCccccCCCCC----CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccC
Q 010234 278 VNLVTDGPPATALGF--NPPDKDIMKKPPR----RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIG 351 (514)
Q Consensus 278 ~~~i~~~~~~l~l~~--~~~~~~im~~~P~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (514)
+|++++.+|+++++. .++++++|.++|+ .++.+.++.+.++.|++.|+++++.++++.++.+...... .
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-----~ 945 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-----S 945 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-----c
Confidence 999999999999987 5667889999997 4577889999999999999999988765444333210000 0
Q ss_pred CCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 010234 352 DGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLT 431 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~ 431 (514)
+| ...++ ....++.|.++++...+..+...+
T Consensus 946 ~g-------------------------------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------- 976 (1057)
T TIGR01652 946 SG-------------------------------------SLDDF-----SSVGVIVFTALVVIVNLKIALEIN------- 976 (1057)
T ss_pred CC-------------------------------------cccch-----hhHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 00 00011 112333444433333322221111
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHhc----cc---cccccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCccc
Q 010234 432 MPPWVNPWLLLAMSVSFGLHFLILYV----PF---LAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGRCTNGSQTS 504 (514)
Q Consensus 432 ~~~~~N~~~~~~~~~~~~l~~~~~~i----p~---~~~~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K~~~r~~~~~~~~ 504 (514)
.++|+-++++.+++++.+++..+ +. +...+.....++.+|+.+++.++++++++.+.|++.+.+.|+...
T Consensus 977 ---~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~ 1053 (1057)
T TIGR01652 977 ---RWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYD 1053 (1057)
T ss_pred ---HhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 12333344444444444333222 11 111122233468899999999999999999999999999987765
Q ss_pred cc
Q 010234 505 RR 506 (514)
Q Consensus 505 ~~ 506 (514)
+.
T Consensus 1054 ~i 1055 (1057)
T TIGR01652 1054 IV 1055 (1057)
T ss_pred Hh
Confidence 54
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=434.58 Aligned_cols=324 Identities=23% Similarity=0.262 Sum_probs=266.2
Q ss_pred CHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCc-----cccccCCcEEEEEecccCCCC
Q 010234 12 DHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSN-----YASMECGLTFVGLVGLRDPPR 86 (514)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~e~~l~~lG~~~~~~~l~ 86 (514)
+++.++++.+++++|+++|+||||+|||.++++++..|.+.++++++.+.++++ .+++|+||+++|+++++|+++
T Consensus 649 ~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr 728 (1178)
T PLN03190 649 NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQ 728 (1178)
T ss_pred cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCc
Confidence 345678899999999999999999999999988777676666666666655543 467899999999999999999
Q ss_pred hhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccce-----------------------------------
Q 010234 87 NEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDIS----------------------------------- 131 (514)
Q Consensus 87 ~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~----------------------------------- 131 (514)
++++++|++|+++||+++|+|||+..+|..+|+++|+..++....
T Consensus 729 ~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 808 (1178)
T PLN03190 729 QGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTG 808 (1178)
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhcccccccccccc
Confidence 999999999999999999999999999999999999865542211
Q ss_pred ----------ecccChHHHhhhhHH------HHHHhhcCceEEEecChhhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhh
Q 010234 132 ----------LKSLTGKEFMEMHDK------KAHLRQSGGLLFSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALK 194 (514)
Q Consensus 132 ----------~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~ 194 (514)
..+++|..+..+.+. ......+..+++||++|.||.++++.++.. ++.|+|+|||.||++|++
T Consensus 809 ~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq 888 (1178)
T PLN03190 809 GSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQ 888 (1178)
T ss_pred ccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHH
Confidence 134455555544321 122334566799999999999999999987 578999999999999999
Q ss_pred hcCcceeeCCCCcH--HHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---
Q 010234 195 LADIGIAMGIAGTE--VAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEG--- 269 (514)
Q Consensus 195 ~A~igvamg~~~~~--~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 269 (514)
+||||| |..|.| +|+.+||+.+....+..-+-++ |||++|.|+...+.|++|+|++++++++++.++..+++
T Consensus 889 ~AdVGI--GIsG~EG~qA~~aSDfaI~~Fr~L~rLLlv-HGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~l 965 (1178)
T PLN03190 889 MADVGV--GISGQEGRQAVMASDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTA 965 (1178)
T ss_pred hcCeee--eecCchhHHHHHhhccchhhhHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 999999 557777 8899999999877776555555 99999999999999999999999999999999988887
Q ss_pred hhHHHHHHHHHHhhhhhhcccccCCCC--ccccCCCCCC----CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 270 LIPVQLLWVNLVTDGPPATALGFNPPD--KDIMKKPPRR----SDDSLISAWILFRYLVIGLYVGIATVGVFIIW 338 (514)
Q Consensus 270 ~~~~~~l~~~~i~~~~~~l~l~~~~~~--~~im~~~P~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (514)
+.++.+.++|++++.+|.++++.-+.| ++...+.|.- +....++.+.++.|++.|+++++.++++.++.
T Consensus 966 y~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~ 1040 (1178)
T PLN03190 966 INEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFA 1040 (1178)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568889999999999999999874444 4455555643 35567889999999999999998876554443
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-45 Score=396.48 Aligned_cols=355 Identities=26% Similarity=0.355 Sum_probs=274.5
Q ss_pred HHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHH
Q 010234 13 HKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQA 92 (514)
Q Consensus 13 ~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~ 92 (514)
++.++++.+.+++++++|+||+++|||. .|++++|+|+++++|++||+++++
T Consensus 399 ~~~~~~~~~~~~~~~~~G~rvl~vA~~~----------------------------~e~~l~~~Gli~l~Dp~R~~a~~a 450 (755)
T TIGR01647 399 KEIEEKVEEKVDELASRGYRALGVARTD----------------------------EEGRWHFLGLLPLFDPPRHDTKET 450 (755)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEEEc----------------------------CCCCcEEEEEeeccCCChhhHHHH
Confidence 3456778889999999999999999983 147899999999999999999999
Q ss_pred HHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHH
Q 010234 93 IEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRL 172 (514)
Q Consensus 93 I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~ 172 (514)
|++|+++||+++|+|||+..+|.++|+++|+.+.... .....++.+.+.+.+++......+..+|+|.+|+||.++++.
T Consensus 451 I~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~ 529 (755)
T TIGR01647 451 IERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYT-ADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEI 529 (755)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcC-HHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHH
Confidence 9999999999999999999999999999999652100 001112222233333333333344669999999999999999
Q ss_pred HhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 010234 173 LKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNI 252 (514)
Q Consensus 173 l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~ 252 (514)
+|..++.|+|+|||.||.|+|++||+||||| +++|.+|++||+++.++++..+..++++||++++|+++++.|.++.|+
T Consensus 530 lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~ 608 (755)
T TIGR01647 530 LQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETI 608 (755)
T ss_pred HHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence 9999999999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 010234 253 GEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLYVGIATV 332 (514)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (514)
..++..++..++.. .+++|+|++|+|++.+. ++++++++++++. ++|. ...+. ..+...+..|.+.++.++
T Consensus 609 ~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~---~~~~~-~~~~~~~~~g~~~~~~~~ 679 (755)
T TIGR01647 609 RIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQ---RWNLR-EVFTMSTVLGIYLVISTF 679 (755)
T ss_pred HHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCC---ccchH-HHHHHHHHHHHHHHHHHH
Confidence 98776666554322 34999999999999996 6999999988752 3333 33333 444556677877777666
Q ss_pred HHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhHHHHHHHHH
Q 010234 333 GVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLV 412 (514)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv 412 (514)
+++++.+....+... .+ .......++|++|..++
T Consensus 680 ~~~~~~~~~~~~~~~----~~------------------------------------------~~~~~~~~~t~~f~~~~ 713 (755)
T TIGR01647 680 LLLAIALDTSFFIDK----FG------------------------------------------LQLLHGNLQSLIYLQVS 713 (755)
T ss_pred HHHHHHHhcccchhc----cc------------------------------------------ccccHhhhHHHHHHHHH
Confidence 655543310000000 00 00001347899999999
Q ss_pred HHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHH
Q 010234 413 AIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLIL 455 (514)
Q Consensus 413 ~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~ 455 (514)
+.|.++.+++|+++.+.+. +.|+++.++.++..++..++.
T Consensus 714 ~~~~~~~~~~r~~~~~~~~---~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 714 ISGQATIFVTRTHGFFWSE---RPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred HHHHHHHheeccCCCCccc---CCcHHHHHHHHHHHHHHHHHh
Confidence 9999999999987655432 357777777777776666544
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-49 Score=427.23 Aligned_cols=439 Identities=21% Similarity=0.274 Sum_probs=321.0
Q ss_pred HHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCc-----cccccCCcEEEEEecccCCCCh
Q 010234 13 HKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSN-----YASMECGLTFVGLVGLRDPPRN 87 (514)
Q Consensus 13 ~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~e~~l~~lG~~~~~~~l~~ 87 (514)
++.+++..++++++|.+|+||||+|||++++++++.|.+++++|.+++.++++ ++.+|+||+++|..++||++++
T Consensus 575 ~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQd 654 (1151)
T KOG0206|consen 575 EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQD 654 (1151)
T ss_pred hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhcc
Confidence 34567777899999999999999999999999999999999999999987765 8899999999999999999999
Q ss_pred hHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceec----------------------------------
Q 010234 88 EVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLK---------------------------------- 133 (514)
Q Consensus 88 ~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~---------------------------------- 133 (514)
+++++|++|++||||+|++|||..++|..++..|++.+.+......
T Consensus 655 gVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 734 (1151)
T KOG0206|consen 655 GVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKL 734 (1151)
T ss_pred CchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhh
Confidence 9999999999999999999999999999999999987654332211
Q ss_pred ---------ccChHHHhhhhHH------HHHHhhcCceEEEecChhhHHHHHHHHhh-CCCEEEEEcCCcCCHHhhhhcC
Q 010234 134 ---------SLTGKEFMEMHDK------KAHLRQSGGLLFSRAEPRHKQEIVRLLKE-DGEVVAMTGDGVNDAPALKLAD 197 (514)
Q Consensus 134 ---------~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~p~~k~~iv~~l~~-~~~~v~~iGDg~ND~~ml~~A~ 197 (514)
+++|+.+....+. ......+..+++||++|.||+.+++..+. .+..++|||||+||++|++.||
T Consensus 735 ~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~Ah 814 (1151)
T KOG0206|consen 735 EHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAH 814 (1151)
T ss_pred ccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCC
Confidence 1222222111111 12234567899999999999999999974 5678999999999999999999
Q ss_pred cceeeCCCCcH--HHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---hhH
Q 010234 198 IGIAMGIAGTE--VAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEG---LIP 272 (514)
Q Consensus 198 igvamg~~~~~--~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 272 (514)
+||.+ +|.| .|..++|+-+....+..-+-++ |||++|.|+.+++.|++|+|+.+.+.+|++.++..+++ +.+
T Consensus 815 VGVGI--sG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~ 891 (1151)
T KOG0206|consen 815 VGVGI--SGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDD 891 (1151)
T ss_pred cCeee--ccchhhhhhhcccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Confidence 99955 4555 7788899999988888888777 99999999999999999999999999999999888765 778
Q ss_pred HHHHHHHHHhhhhhhcccccCCC--CccccCCCCCCCC----CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 010234 273 VQLLWVNLVTDGPPATALGFNPP--DKDIMKKPPRRSD----DSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLG 346 (514)
Q Consensus 273 ~~~l~~~~i~~~~~~l~l~~~~~--~~~im~~~P~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (514)
+++.++|++++.+|.+++|.-+. +.+.+.+.|..+. ...++.+.++.+++.|++++++++++.+..+... ...
T Consensus 892 ~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~ 970 (1151)
T KOG0206|consen 892 WYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVT 970 (1151)
T ss_pred eEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheee-eec
Confidence 88999999999999999998444 4556667776543 3456677888888899998887765544433211 000
Q ss_pred ccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCC
Q 010234 347 INLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSED 426 (514)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~ 426 (514)
.+| ...+++..|...++.+.+++.+. +. ..
T Consensus 971 ----~~G-------------------------------------~~~d~~~~G~~~~T~~Vivv~~~--ia-------L~ 1000 (1151)
T KOG0206|consen 971 ----SNG-------------------------------------LTADYWTLGTTVFTIIVIVVNLK--IA-------LE 1000 (1151)
T ss_pred ----cCC-------------------------------------CcCChhhccceEEEEEEEEEEee--ee-------ee
Confidence 011 11122222222222222211111 00 01
Q ss_pred CCccccCCCcchHH-HHHHHHHHHHHHHHHh-ccc------cccccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010234 427 GSLLTMPPWVNPWL-LLAMSVSFGLHFLILY-VPF------LAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGRCT 498 (514)
Q Consensus 427 ~s~~~~~~~~N~~~-~~~~~~~~~l~~~~~~-ip~------~~~~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K~~~r~~ 498 (514)
.+.|. |.|+.. |.++++-+++.+++.. .|. +..++.....++.+|+.+++.++.+++++.+.|.+.+.+
T Consensus 1001 ~~ywT---~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~ 1077 (1151)
T KOG0206|consen 1001 TSYWT---WINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTF 1077 (1151)
T ss_pred ehhee---HHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhh
Confidence 11221 122222 2223333322222211 121 122333444678899999999999999999999999999
Q ss_pred CCCccccccc
Q 010234 499 NGSQTSRRKS 508 (514)
Q Consensus 499 ~~~~~~~~~~ 508 (514)
+|+...+.|+
T Consensus 1078 ~Pt~~~~i~~ 1087 (1151)
T KOG0206|consen 1078 FPTDHDIIQE 1087 (1151)
T ss_pred CCcHHHHHHH
Confidence 9998666443
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=350.53 Aligned_cols=418 Identities=22% Similarity=0.287 Sum_probs=298.1
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHH
Q 010234 15 SRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIE 94 (514)
Q Consensus 15 ~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~ 94 (514)
..+.+.+.++.++.+|+||+++|+|.|... .+.+ .....++.+|+||+|+|++.++|+++++++.+|+
T Consensus 648 vP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~---------~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~ 715 (1140)
T KOG0208|consen 648 VPADYQEVLKEYTHQGFRVIALASKELETS---TLQK---------AQKLSRDTVESNLEFLGLIVMENKLKEETKRVID 715 (1140)
T ss_pred CCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHH---------HhhccHhhhhccceeeEEEEeecccccccHHHHH
Confidence 367899999999999999999999998653 1111 1123567889999999999999999999999999
Q ss_pred HHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcccee------------------------------------------
Q 010234 95 DCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISL------------------------------------------ 132 (514)
Q Consensus 95 ~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~------------------------------------------ 132 (514)
+|++++||.+|+|||+..||..+|++||+..+...++.
T Consensus 716 eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~ 795 (1140)
T KOG0208|consen 716 ELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSL 795 (1140)
T ss_pred HHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccCh
Confidence 99999999999999999999999999999655433321
Q ss_pred ---------cccChHHHhhhhH---HHHHHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 133 ---------KSLTGKEFMEMHD---KKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 133 ---------~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
.+++|+.+..+.. +.......+..+|+|++|+||.++++.+|+.+..|.++|||+||+.+||+||+||
T Consensus 796 d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGI 875 (1140)
T KOG0208|consen 796 DVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGI 875 (1140)
T ss_pred hhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCc
Confidence 1222222222211 1111122356799999999999999999999999999999999999999999999
Q ss_pred eeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHH
Q 010234 201 AMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNL 280 (514)
Q Consensus 201 amg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 280 (514)
+.+ ...|.-+|.+.....+..++.++|+|||+.+...-.+++|+..+++......+ .++.....++..|.+++++
T Consensus 876 SLS---eaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDL 950 (1140)
T KOG0208|consen 876 SLS---EAEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDL 950 (1140)
T ss_pred chh---hhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHH
Confidence 887 33446679999999999999999999999999999999999988877655443 3334456799999999999
Q ss_pred HhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccc
Q 010234 281 VTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYS 360 (514)
Q Consensus 281 i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (514)
+...+.+++++..++..++-..+| +..+++.+.+...+.+-++..+.....+++...++++.+.
T Consensus 951 lii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp------------- 1014 (1140)
T KOG0208|consen 951 LIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPP------------- 1014 (1140)
T ss_pred HHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheeeccccceecC-------------
Confidence 999999999999999988777666 6778888888877777776666655555544444333321
Q ss_pred ccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHH
Q 010234 361 QLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWL 440 (514)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~ 440 (514)
+|.. + ++.. ....|..|.+..+..+++. ..-..+++|+.+.|+|+.+
T Consensus 1015 ---------~~~~---~------------~nt~-------s~~~T~lF~vS~fqYi~~a--~v~S~g~pfr~pl~~n~~f 1061 (1140)
T KOG0208|consen 1015 ---------NPQV---D------------DNTQ-------SSDNTSLFFVSSFQYIFIA--LVLSKGSPFRRPLWKNVLF 1061 (1140)
T ss_pred ---------CCCc---C------------cccc-------cceeeEeeehhHHHHHHhh--eeeccCCcccCchhcCcee
Confidence 1100 0 0000 0112223333333333322 2334688999999999998
Q ss_pred HHHHHHHHHHHHHHHhccccc---cccccccCChhhH-HHHHHHHHHHHHHHHHHHHHhhcc
Q 010234 441 LLAMSVSFGLHFLILYVPFLA---QIFGIVPLSFNEW-LLVLAIAFPVVLIDEVLKFVGRCT 498 (514)
Q Consensus 441 ~~~~~~~~~l~~~~~~ip~~~---~~f~~~~l~~~~w-~~~l~~~~~~~l~~e~~K~~~r~~ 498 (514)
...+.+..+..+.++.++... ..+.+++.+-+.. ++.+...+..+....+.+.+.+.+
T Consensus 1062 ~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~~~~~~~~~ 1123 (1140)
T KOG0208|consen 1062 KVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFIILLVVISYFALNYIQPSVGRML 1123 (1140)
T ss_pred eeehhhHHhhhhhhhhccccchhhhhhceeccCcchhHHHHHHHHHHHHHHHHhhhhhhchh
Confidence 776666666555555554322 3466677666333 333434444444455554444433
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=341.08 Aligned_cols=416 Identities=19% Similarity=0.235 Sum_probs=309.1
Q ss_pred HHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCc------cccccCCcEEEEEecccCCCChhHHH
Q 010234 18 LILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSN------YASMECGLTFVGLVGLRDPPRNEVHQ 91 (514)
Q Consensus 18 ~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~e~~l~~lG~~~~~~~l~~~~~~ 91 (514)
.++|...+||.+|+|||++|.|.|++++++.+.+.++.|+.++.|+.. ...+|+||.++|+.|.||+++++++.
T Consensus 586 WleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~ 665 (1051)
T KOG0210|consen 586 WLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKP 665 (1051)
T ss_pred hhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHh
Confidence 466789999999999999999999999999888889999998887764 33789999999999999999999999
Q ss_pred HHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccce------------------------ecccChHHHhhhh---
Q 010234 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDIS------------------------LKSLTGKEFMEMH--- 144 (514)
Q Consensus 92 ~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~------------------------~~~~~~~~~~~~~--- 144 (514)
+++.||++||++||+|||..++|.-+|+..++.+.++.+. ..+++|+.+.-..
T Consensus 666 tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yy 745 (1051)
T KOG0210|consen 666 TLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYY 745 (1051)
T ss_pred HHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHH
Confidence 9999999999999999999999999999999977665431 2233333322111
Q ss_pred --HHHHHHhhcCceEEEecChhhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCcceeeCCCCcH--HHHhccccccc
Q 010234 145 --DKKAHLRQSGGLLFSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGIAMGIAGTE--VAKEASDMVLA 219 (514)
Q Consensus 145 --~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~--~~k~~ad~v~~ 219 (514)
+..+.......+++||++|+||+++++.+|+. +..|+|||||.||+.|+++||+||.+ .|.| ++.-+||+.+.
T Consensus 746 e~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI--~gkEGkQASLAADfSIt 823 (1051)
T KOG0210|consen 746 EDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGI--VGKEGKQASLAADFSIT 823 (1051)
T ss_pred HHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceee--ecccccccchhccccHH
Confidence 11123345678999999999999999999875 68999999999999999999999954 3333 56788999987
Q ss_pred CCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHH---HHHHHHHhhhhhhcccccC-CC
Q 010234 220 DDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQ---LLWVNLVTDGPPATALGFN-PP 295 (514)
Q Consensus 220 ~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~i~~~~~~l~l~~~-~~ 295 (514)
....-+-+-+. |||.+|.|..+.-+|.+...+....++.+++....+.|...+| ++.+..+++++|.+++.++ +.
T Consensus 824 qF~Hv~rLLl~-HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv 902 (1051)
T KOG0210|consen 824 QFSHVSRLLLW-HGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDV 902 (1051)
T ss_pred HHHHHHHHhhc-cccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccc
Confidence 66555555444 9999999999999999999999988888888777777755444 6777889999999999984 33
Q ss_pred CccccCCCCCC----CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCC
Q 010234 296 DKDIMKKPPRR----SDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSW 371 (514)
Q Consensus 296 ~~~im~~~P~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (514)
.++.-...|.- ...+.++.+.|+.|.+.+++++..+...+++.+.. .|
T Consensus 903 ~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~-ef--------------------------- 954 (1051)
T KOG0210|consen 903 SESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT-EF--------------------------- 954 (1051)
T ss_pred cHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh-hh---------------------------
Confidence 33333344431 35667888889999999999987765433332210 00
Q ss_pred CCcccCCCcCCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHH
Q 010234 372 GNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLH 451 (514)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~ 451 (514)
....++.|.++++..+.-..-.. ..++|..+++-+++++++
T Consensus 955 -----------------------------~~ivaisFtaLi~tELiMVaLtv----------~tw~~~m~vae~lsL~~Y 995 (1051)
T KOG0210|consen 955 -----------------------------IHIVAISFTALILTELIMVALTV----------RTWHWLMVVAELLSLALY 995 (1051)
T ss_pred -----------------------------eEeeeeeeHHHHHHHHHHHhhhh----------hhhhHHHHHHHHHHHHHH
Confidence 11234555555554443221111 113566777777777766
Q ss_pred HHHHhccccccccccccCCh-hhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccc
Q 010234 452 FLILYVPFLAQIFGIVPLSF-NEWLLVLAIAFPVVLIDEVLKFVGRCTNGSQTSR 505 (514)
Q Consensus 452 ~~~~~ip~~~~~f~~~~l~~-~~w~~~l~~~~~~~l~~e~~K~~~r~~~~~~~~~ 505 (514)
+ +.+|.+.+.|....++. .+.+-+.++.++.+++..+.|+..|++.|...-|
T Consensus 996 i--vsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 996 I--VSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred H--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh
Confidence 5 35566777776655543 3333345567788889999999999988776544
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=289.71 Aligned_cols=181 Identities=28% Similarity=0.432 Sum_probs=169.0
Q ss_pred HHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHHHH
Q 010234 19 ILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRA 98 (514)
Q Consensus 19 ~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l~~ 98 (514)
+.+..++++++|+|+++++ .|++++|+++++|++||+++++|++||+
T Consensus 409 ~~~~~~~~a~~G~~~l~v~---------------------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~ 455 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVL---------------------------------EDNEILGVIYLKDVIKDGLVERFRELRE 455 (673)
T ss_pred HHHHHHHHHhCCCeEEEEE---------------------------------ECCEEEEEEEeecCCcHHHHHHHHHHHH
Confidence 5566778999999999865 2457999999999999999999999999
Q ss_pred cCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhCCC
Q 010234 99 AGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGE 178 (514)
Q Consensus 99 ~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~ 178 (514)
+||+++|+|||+..+|.++|+++|+++ +++|.+|++|.++++.+|.+++
T Consensus 456 ~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------------------v~A~~~PedK~~iV~~lQ~~G~ 504 (673)
T PRK14010 456 MGIETVMCTGDNELTAATIAKEAGVDR-------------------------------FVAECKPEDKINVIREEQAKGH 504 (673)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------EEcCCCHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999952 7899999999999999999999
Q ss_pred EEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 179 VVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASI 258 (514)
Q Consensus 179 ~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 258 (514)
.|+|+|||.||.|+|++||+||||| ++++.+|++||+|+.++++..+.+++++||++|.|+++.+.|.+..|+...+..
T Consensus 505 ~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i 583 (673)
T PRK14010 505 IVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAI 583 (673)
T ss_pred EEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHH
Confidence 9999999999999999999999999 899999999999999999999999999999999999999999999999988877
Q ss_pred HHHHhh
Q 010234 259 FFTAAL 264 (514)
Q Consensus 259 ~~~~~~ 264 (514)
+...+.
T Consensus 584 ~~a~~~ 589 (673)
T PRK14010 584 LPAMFM 589 (673)
T ss_pred HHHHHH
Confidence 665544
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-30 Score=260.88 Aligned_cols=423 Identities=19% Similarity=0.202 Sum_probs=277.5
Q ss_pred HHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHH
Q 010234 14 KSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAI 93 (514)
Q Consensus 14 ~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I 93 (514)
+....+++...+++.+|-|||+++||++..-...+ ....+++++|+||+|.|++.+.-++++|++++|
T Consensus 617 dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I 684 (1160)
T KOG0209|consen 617 DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQ------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTI 684 (1160)
T ss_pred hCchhHHHHHHHHhhccceEEEEecccccccchhh------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHH
Confidence 34566888899999999999999999975211000 112457789999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCc------------cc-------------------------eecccC
Q 010234 94 EDCRAAGIRVMVITGDNKNTAEAICREIGVFECNE------------DI-------------------------SLKSLT 136 (514)
Q Consensus 94 ~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~------------~~-------------------------~~~~~~ 136 (514)
+.|++.+++++|+|||++.+|.++|+++|+..+.. ++ +..+++
T Consensus 685 ~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcit 764 (1160)
T KOG0209|consen 685 KELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCIT 764 (1160)
T ss_pred HHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcc
Confidence 99999999999999999999999999999854311 11 112334
Q ss_pred hHHHhhhhHHHH-HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHH-----
Q 010234 137 GKEFMEMHDKKA-HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVA----- 210 (514)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~----- 210 (514)
|+.+..+..... ........+|+|..|.||..++..++..|..++|+|||.||+.+||+|++|||.-+++.+..
T Consensus 765 G~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~ 844 (1160)
T KOG0209|consen 765 GSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEK 844 (1160)
T ss_pred hhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhh
Confidence 444444433321 12233578999999999999999999999999999999999999999999999865443210
Q ss_pred -----------------------------------------------------------------HhcccccccCCCchh
Q 010234 211 -----------------------------------------------------------------KEASDMVLADDDFST 225 (514)
Q Consensus 211 -----------------------------------------------------------------k~~ad~v~~~~~~~~ 225 (514)
.-+|.+.....+.++
T Consensus 845 ~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~ 924 (1160)
T KOG0209|consen 845 RRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSS 924 (1160)
T ss_pred hhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHH
Confidence 013334444446778
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCC
Q 010234 226 IVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR 305 (514)
Q Consensus 226 i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~ 305 (514)
|.+.|++||+.+.+.-+++.......++....+-+..+-| --++..|...-.+++- .--+.++..+|-+.+.++.|
T Consensus 925 v~~IIrQGRctLVtTlQMfKILALN~LisAYslSvlyldG--VKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP- 1000 (1160)
T KOG0209|consen 925 VTHIIRQGRCTLVTTLQMFKILALNCLISAYSLSVLYLDG--VKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERP- 1000 (1160)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--ceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCC-
Confidence 9999999999999998888876555444433332111112 1256666544433322 12234556777788888776
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcc
Q 010234 306 RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQV 385 (514)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (514)
..+++|...+.+.+.+..++... +++.... .+.-. .. .+. .+.
T Consensus 1001 --~~nIFN~Y~i~svl~QFaVH~~t----LvYi~~~-a~~~~---p~--------------~~~------vdl------- 1043 (1160)
T KOG0209|consen 1001 --LPNIFNVYIILSVLLQFAVHIAT----LVYITGE-AYKLE---PP--------------EEK------VDL------- 1043 (1160)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHH----hhhhHHH-HHhcC---Cc--------------ccc------cCh-------
Confidence 56688877776666666655322 1111110 00000 00 000 000
Q ss_pred cccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHh--ccccccc
Q 010234 386 FTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILY--VPFLAQI 463 (514)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~--ip~~~~~ 463 (514)
...|... ...+++.+ .-+..|+... .+...+.+|+.+...|+.+..+++++.++.+.+.. .|-+..-
T Consensus 1044 -------~~~F~Ps-llNt~vyi-isl~~QvsTF--AVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~ 1112 (1160)
T KOG0209|consen 1044 -------EEKFSPS-LLNTTVYI-ISLAQQVSTF--AVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEK 1112 (1160)
T ss_pred -------hcccChh-hhhhHHHH-HHHHHHHHHh--hhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhh
Confidence 0111111 33444444 3344444432 23446889999999999999888887776655443 3457778
Q ss_pred cccccCChhhHH----HHHHHHHHHHHHHHHHHHHhhccCC
Q 010234 464 FGIVPLSFNEWL----LVLAIAFPVVLIDEVLKFVGRCTNG 500 (514)
Q Consensus 464 f~~~~l~~~~w~----~~l~~~~~~~l~~e~~K~~~r~~~~ 500 (514)
|.+++++-.+-. +.++-.+++++++.+.|++....++
T Consensus 1113 ~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~~~k~ 1153 (1160)
T KOG0209|consen 1113 FELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFGDHKP 1153 (1160)
T ss_pred eeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 888888754422 2333466788889998888774443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=270.08 Aligned_cols=171 Identities=34% Similarity=0.515 Sum_probs=156.1
Q ss_pred HHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHH
Q 010234 17 NLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDC 96 (514)
Q Consensus 17 ~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l 96 (514)
+++.+.+++++++|.|++++|+ |++++|+++++|++||+++++|++|
T Consensus 411 ~~~~~~~~~~a~~G~~~l~va~---------------------------------~~~~lG~i~l~D~~R~~~~eai~~L 457 (679)
T PRK01122 411 AELDAAVDEVARKGGTPLVVAE---------------------------------DNRVLGVIYLKDIVKPGIKERFAEL 457 (679)
T ss_pred HHHHHHHHHHHhCCCcEEEEEE---------------------------------CCeEEEEEEEeccCchhHHHHHHHH
Confidence 5677788899999999999994 2478999999999999999999999
Q ss_pred HHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhC
Q 010234 97 RAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKED 176 (514)
Q Consensus 97 ~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~ 176 (514)
+++||+++|+|||++.+|.++|+++|+++ +++|.+|++|.++++.+|..
T Consensus 458 r~~GI~vvMiTGDn~~TA~aIA~elGId~-------------------------------v~A~~~PedK~~iV~~lQ~~ 506 (679)
T PRK01122 458 RKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FLAEATPEDKLALIRQEQAE 506 (679)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCcE-------------------------------EEccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999942 78999999999999999999
Q ss_pred CCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 010234 177 GEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNI 252 (514)
Q Consensus 177 ~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~ 252 (514)
++.|+|+|||.||.|+|++||+||||| ++++.+|++||+|+.++|+..+.++++.||+..-+--..-.|++..-+
T Consensus 507 G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 507 GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 999999999999999999999999999 999999999999999999999999999999998554444556555433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=254.33 Aligned_cols=178 Identities=33% Similarity=0.504 Sum_probs=164.3
Q ss_pred HHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHH
Q 010234 17 NLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDC 96 (514)
Q Consensus 17 ~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l 96 (514)
+.+.+.+++++++|.|++++|+. .+++|+++++|++||+++++|++|
T Consensus 412 ~~~~~~~~~~a~~G~r~l~va~~---------------------------------~~~lG~i~l~D~~Rp~a~eaI~~l 458 (675)
T TIGR01497 412 TDLDQAVDQVARQGGTPLVVCED---------------------------------NRIYGVIYLKDIVKGGIKERFAQL 458 (675)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEC---------------------------------CEEEEEEEecccchhHHHHHHHHH
Confidence 45677888999999999999953 278999999999999999999999
Q ss_pred HHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhC
Q 010234 97 RAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKED 176 (514)
Q Consensus 97 ~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~ 176 (514)
+++|++++|+|||+..++.++|+++|+++ ++++++|++|.++++.+|..
T Consensus 459 ~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------------------v~a~~~PedK~~~v~~lq~~ 507 (675)
T TIGR01497 459 RKMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------------------FIAEATPEDKIALIRQEQAE 507 (675)
T ss_pred HHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------EEcCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999942 78899999999999999999
Q ss_pred CCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH
Q 010234 177 GEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVA 256 (514)
Q Consensus 177 ~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 256 (514)
++.|+|+|||.||.|+|++||+|+||| ++++.+|++||+++.++|+..+.++++.||+++-+-.....|++...++..+
T Consensus 508 g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~ 586 (675)
T TIGR01497 508 GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYF 586 (675)
T ss_pred CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHH
Confidence 999999999999999999999999999 8999999999999999999999999999999999888888888877776554
Q ss_pred HHH
Q 010234 257 SIF 259 (514)
Q Consensus 257 ~~~ 259 (514)
..+
T Consensus 587 ~~~ 589 (675)
T TIGR01497 587 AII 589 (675)
T ss_pred HHH
Confidence 443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=249.42 Aligned_cols=158 Identities=42% Similarity=0.607 Sum_probs=150.3
Q ss_pred CCcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHH
Q 010234 71 CGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHL 150 (514)
Q Consensus 71 ~~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (514)
.|-.++|+++++|++||+++++|++|++.|++++|+|||+..+++.+|+++||++
T Consensus 524 ~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------- 578 (713)
T COG2217 524 VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------- 578 (713)
T ss_pred ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------------------------
Confidence 4558999999999999999999999999999999999999999999999999953
Q ss_pred hhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 151 RQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 151 ~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+++...|++|.++++.+|..++.|+|+|||.||.|+|.+||+||||| +++|+++++||+++.+++...+.+++
T Consensus 579 ------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 579 ------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred ------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 231 GEGRSIYNNMKAFIRYMISSNIGEVASIFF 260 (514)
Q Consensus 231 ~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~ 260 (514)
+-+|+.+.++++++.|.+.+|.+.+.....
T Consensus 652 ~lsr~t~~~IkqNl~~A~~yn~~~iplA~~ 681 (713)
T COG2217 652 DLSRATRRIIKQNLFWAFGYNAIAIPLAAG 681 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988665543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=231.58 Aligned_cols=206 Identities=30% Similarity=0.441 Sum_probs=172.2
Q ss_pred HHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHHHH
Q 010234 19 ILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRA 98 (514)
Q Consensus 19 ~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l~~ 98 (514)
+++.+++-...|.-+..++.- -++.|+++++|++|||+..+|+.|++
T Consensus 691 i~~~~~~~e~~g~tvv~v~vn---------------------------------~~l~gv~~l~D~vr~~a~~av~~Lk~ 737 (951)
T KOG0207|consen 691 ILDALTESERKGQTVVYVAVN---------------------------------GQLVGVFALEDQVRPDAALAVAELKS 737 (951)
T ss_pred HHHhhhhHhhcCceEEEEEEC---------------------------------CEEEEEEEeccccchhHHHHHHHHHh
Confidence 555666666677777666643 37899999999999999999999999
Q ss_pred cCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhCCC
Q 010234 99 AGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGE 178 (514)
Q Consensus 99 ~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~ 178 (514)
.|++++|+|||+..+|+++|+++|++ .+++...|++|.+.++.+|+++.
T Consensus 738 ~Gi~v~mLTGDn~~aA~svA~~VGi~-------------------------------~V~aev~P~~K~~~Ik~lq~~~~ 786 (951)
T KOG0207|consen 738 MGIKVVMLTGDNDAAARSVAQQVGID-------------------------------NVYAEVLPEQKAEKIKEIQKNGG 786 (951)
T ss_pred cCceEEEEcCCCHHHHHHHHHhhCcc-------------------------------eEEeccCchhhHHHHHHHHhcCC
Confidence 99999999999999999999999973 48999999999999999999999
Q ss_pred EEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 179 VVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASI 258 (514)
Q Consensus 179 ~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 258 (514)
.|+|+|||.||.|+|.+||+||||| ++++.+.++||+|+..|+..+++.+++.+|+...|++.++.|.+.+|+..+...
T Consensus 787 ~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIA 865 (951)
T KOG0207|consen 787 PVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIA 865 (951)
T ss_pred cEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999 789999999999999999999999999999999999999999999998865432
Q ss_pred HHHHhhcCCCchhHH---HHHHHHHHhhhhhhccc
Q 010234 259 FFTAALGIPEGLIPV---QLLWVNLVTDGPPATAL 290 (514)
Q Consensus 259 ~~~~~~~~~~~~~~~---~~l~~~~i~~~~~~l~l 290 (514)
...|..++..+.|+ ..+..+.+...+-++.+
T Consensus 866 -agvF~P~~~~L~Pw~A~lama~SSvsVv~sSllL 899 (951)
T KOG0207|consen 866 -AGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLL 899 (951)
T ss_pred -eecccCCccccCchHHHHHHHhhhHHHhhhHHHH
Confidence 22333333113333 34444544444444443
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-25 Score=217.77 Aligned_cols=487 Identities=14% Similarity=0.140 Sum_probs=318.3
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccC----CCCCC-CCcccccc-----------------
Q 010234 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFET----YDGNE-DHPAHTLL----------------- 60 (514)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~----~~~~~-~~~~~~~~----------------- 60 (514)
|.+.++.|++..+|.+.++-+.+-...| .+++||||+....... +..+. .++.++.+
T Consensus 711 WdGadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~celp~sipikqnar 789 (1354)
T KOG4383|consen 711 WDGADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETACELPHSIPIKQNAR 789 (1354)
T ss_pred cCCceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhhccCCCCCcchhhhh
Confidence 5667889999999999999988888888 6899999984321100 00000 00000000
Q ss_pred -------------cCCCccccccCCcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccC
Q 010234 61 -------------LNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN 127 (514)
Q Consensus 61 -------------~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~ 127 (514)
...+...+.-++.+|.|++..+.+.+++....|+.|.++.||++..|-.+....+-+|+++|+...+
T Consensus 790 ~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGW 869 (1354)
T KOG4383|consen 790 ESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGW 869 (1354)
T ss_pred hhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhcccccc
Confidence 0001122233678999999999999999999999999999999999999999999999999998776
Q ss_pred ccceecccChH----------------------HHhhhh----------HHHH---------------------------
Q 010234 128 EDISLKSLTGK----------------------EFMEMH----------DKKA--------------------------- 148 (514)
Q Consensus 128 ~~~~~~~~~~~----------------------~~~~~~----------~~~~--------------------------- 148 (514)
++.....-.++ ++..+. .++.
T Consensus 870 NCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLP 949 (1354)
T KOG4383|consen 870 NCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLP 949 (1354)
T ss_pred ceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcC
Confidence 66543322211 011110 0000
Q ss_pred --------HHhhc-----CceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcC--CHHhhhhcCcceeeCCCC-------
Q 010234 149 --------HLRQS-----GGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVN--DAPALKLADIGIAMGIAG------- 206 (514)
Q Consensus 149 --------~~~~~-----~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~N--D~~ml~~A~igvamg~~~------- 206 (514)
++..- -+.+|.+++|+...+|++.+|++|++|+++|...| ..-.+-+||++||+..-.
T Consensus 950 rGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e 1029 (1354)
T KOG4383|consen 950 RGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLE 1029 (1354)
T ss_pred cchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceec
Confidence 00000 13578899999999999999999999999999988 345677899999885210
Q ss_pred ------cH-----------------HHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010234 207 ------TE-----------------VAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAA 263 (514)
Q Consensus 207 ------~~-----------------~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 263 (514)
.- ...-++|+.....+.-.+..+|+.+|+....+|+++.|.+++.+.+....|+..+
T Consensus 1030 ~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~ 1109 (1354)
T KOG4383|consen 1030 DFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCF 1109 (1354)
T ss_pred ccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 1111234444444455688899999999999999999999999999999999999
Q ss_pred hcCCCchhHHHHHHHHHHhhhhhhcc-cccCCCCccccCCCCCCCCCCCCcH---HHHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 264 LGIPEGLIPVQLLWVNLVTDGPPATA-LGFNPPDKDIMKKPPRRSDDSLISA---WILFRYLVIGLYVGIATVGVFIIWY 339 (514)
Q Consensus 264 ~~~~~~~~~~~~l~~~~i~~~~~~l~-l~~~~~~~~im~~~P~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (514)
+.+|..++-.+++|..++..++..+. +-..++++.+|.+...+....+... +.....++.....+..+...|.+..
T Consensus 1110 ~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFilkFsls~ssclIcFgf~L 1189 (1354)
T KOG4383|consen 1110 FFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFILKFSLSASSCLICFGFLL 1189 (1354)
T ss_pred HhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999988877776 3346666666655543333333221 1222222222222222222221111
Q ss_pred hhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHH
Q 010234 340 THGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNS 419 (514)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~ 419 (514)
..+.+..-..+..+........+-+++..|++. |..|+..++...-.-++.+.++..
T Consensus 1190 --~afcd~~~d~n~~nC~~~m~~S~ddqa~a~Fed---------------------fangL~saQkl~aa~iilH~ifiq 1246 (1354)
T KOG4383|consen 1190 --MAFCDLMCDFNDINCLFNMDGSADDQALAEFED---------------------FANGLGSAQKLLAAEIILHIIFIQ 1246 (1354)
T ss_pred --HHhhhhhccccccceeeccCCCcCcccchhHHH---------------------HHhhhhhHHHHHHHHHHHHhheeE
Confidence 111111111111111111111122223333221 222344566667777788888888
Q ss_pred HHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhcc------ccc-cccccccCChhhHHHHHHHHHHHHHHHHHHH
Q 010234 420 LNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVP------FLA-QIFGIVPLSFNEWLLVLAIAFPVVLIDEVLK 492 (514)
Q Consensus 420 ~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip------~~~-~~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K 492 (514)
+.+.++..++|+..+..|.||-+.+-..+.-+.+++.+. ... -.|++...+..-|++.+++..++.+.+|++|
T Consensus 1247 IThih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiK 1326 (1354)
T KOG4383|consen 1247 ITHIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIK 1326 (1354)
T ss_pred EEEEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHH
Confidence 999999999999899999988666544444443333321 111 2466777788889998888888889999999
Q ss_pred HHhhccCCCcccccccCCCCC
Q 010234 493 FVGRCTNGSQTSRRKSSKPKS 513 (514)
Q Consensus 493 ~~~r~~~~~~~~~~~~~~~~~ 513 (514)
..+.+.+-|+|||+|.+..++
T Consensus 1327 iheIR~~~R~QkRqK~eFdTK 1347 (1354)
T KOG4383|consen 1327 IHEIRQFTREQKRQKFEFDTK 1347 (1354)
T ss_pred HHHHHHHHHHHHhhhheeccc
Confidence 999999999999999988654
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=232.42 Aligned_cols=174 Identities=30% Similarity=0.460 Sum_probs=158.4
Q ss_pred HHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHHH
Q 010234 18 LILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCR 97 (514)
Q Consensus 18 ~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l~ 97 (514)
.+.+.++++..+|.|++++|+. .+++|+++++|+++|+++++|++|+
T Consensus 535 ~~~~~~~~~~~~g~~~v~va~~---------------------------------~~~~g~i~l~d~~r~~a~~~i~~L~ 581 (741)
T PRK11033 535 AFAGQINELESAGKTVVLVLRN---------------------------------DDVLGLIALQDTLRADARQAISELK 581 (741)
T ss_pred HHHHHHHHHHhCCCEEEEEEEC---------------------------------CEEEEEEEEecCCchhHHHHHHHHH
Confidence 3555677889999999999852 3789999999999999999999999
Q ss_pred HcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhCC
Q 010234 98 AAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDG 177 (514)
Q Consensus 98 ~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~ 177 (514)
++|++++|+|||+..++.++++++|+. .+++..|++|.++++.++..
T Consensus 582 ~~gi~~~llTGd~~~~a~~ia~~lgi~--------------------------------~~~~~~p~~K~~~v~~l~~~- 628 (741)
T PRK11033 582 ALGIKGVMLTGDNPRAAAAIAGELGID--------------------------------FRAGLLPEDKVKAVTELNQH- 628 (741)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCC--------------------------------eecCCCHHHHHHHHHHHhcC-
Confidence 999999999999999999999999994 23456899999999999965
Q ss_pred CEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH
Q 010234 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVAS 257 (514)
Q Consensus 178 ~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 257 (514)
+.|+|+|||.||.+||+.||+||||| ++++.++++||+++.+++..++.++++.||+.+.++++++.|.+.+|...+..
T Consensus 629 ~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~ 707 (741)
T PRK11033 629 APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVT 707 (741)
T ss_pred CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999 78999999999999999999999999999999999999999999999876554
Q ss_pred H
Q 010234 258 I 258 (514)
Q Consensus 258 ~ 258 (514)
.
T Consensus 708 a 708 (741)
T PRK11033 708 T 708 (741)
T ss_pred H
Confidence 4
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=216.15 Aligned_cols=257 Identities=33% Similarity=0.437 Sum_probs=196.0
Q ss_pred eCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhH
Q 010234 10 PLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEV 89 (514)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~ 89 (514)
.-+++.++...+.+++|+++|+|.+++|++...++..+ .-.....|+|++-+-|++|.++
T Consensus 438 ~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~--------------------~~g~pw~~~gllp~fdpprhds 497 (942)
T KOG0205|consen 438 NEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKE--------------------SPGGPWEFVGLLPLFDPPRHDS 497 (942)
T ss_pred hccCcchHHHHHHHHHHHHhcchhhhhhhhcccccccc--------------------CCCCCcccccccccCCCCccch
Confidence 34667889999999999999999999999986543211 1135578999999999999999
Q ss_pred HHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcccee-cccChHHHhhhhHHHHHHhhcCceEEEecChhhHHH
Q 010234 90 HQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISL-KSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQE 168 (514)
Q Consensus 90 ~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~ 168 (514)
.++|++....|..|.|+|||...-++..++++|+-.+-..-.. .-..+++...-.+..... .+..-|+..-|++|.+
T Consensus 498 a~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~eli--e~adgfAgVfpehKy~ 575 (942)
T KOG0205|consen 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELI--EKADGFAGVFPEHKYE 575 (942)
T ss_pred HHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHh--hhccCccccCHHHHHH
Confidence 9999999999999999999999999999999988543211000 000000000000011111 1234577888999999
Q ss_pred HHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHH
Q 010234 169 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMI 248 (514)
Q Consensus 169 iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~ 248 (514)
+++.+|++++.+.|.|||.||.|+++.||+|+|+. ++++.++.++|+|+..+..+.+..++..+|.+|+|++.+..|.+
T Consensus 576 iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyav 654 (942)
T KOG0205|consen 576 IVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (942)
T ss_pred HHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeee
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccc
Q 010234 249 SSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALG 291 (514)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~ 291 (514)
+..+-.++... ...+-+...++|+..+++.++-+. +..+.+
T Consensus 655 sitiriv~gfm-l~alIw~~df~pfmvliiailnd~-t~mtis 695 (942)
T KOG0205|consen 655 SITIRIVFGFM-LIALIWEFDFSPFMVLIIAILNDG-TIMTIS 695 (942)
T ss_pred hhHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHhcCC-ceEEEE
Confidence 87776543222 222223345777777777666553 333443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-24 Score=222.55 Aligned_cols=168 Identities=48% Similarity=0.773 Sum_probs=155.8
Q ss_pred HHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHHHHc
Q 010234 20 LDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAA 99 (514)
Q Consensus 20 ~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l~~~ 99 (514)
.+.+++++.+|+|++++|++. +++|++.++|++++++.++|+.|+++
T Consensus 316 ~~~~~~~~~~g~~~~~~a~~~---------------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~ 362 (499)
T TIGR01494 316 EEKVKELAQSGLRVLAVASKE---------------------------------TLLGLLGLEDPLRDDAKETISELREA 362 (499)
T ss_pred HHHHHHHHhCCCEEEEEEECC---------------------------------eEEEEEEecCCCchhHHHHHHHHHHC
Confidence 445667889999999999763 58999999999999999999999999
Q ss_pred CCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhCCCE
Q 010234 100 GIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEV 179 (514)
Q Consensus 100 Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~ 179 (514)
|++++|+|||+..++..+++++|+ +++.+|++|.++++.++..++.
T Consensus 363 gi~~~~ltGD~~~~a~~ia~~lgi----------------------------------~~~~~p~~K~~~v~~l~~~g~~ 408 (499)
T TIGR01494 363 GIRVIMLTGDNVLTAKAIAKELGI----------------------------------FARVTPEEKAALVEALQKKGRV 408 (499)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCc----------------------------------eeccCHHHHHHHHHHHHHCCCE
Confidence 999999999999999999999986 4678999999999999999999
Q ss_pred EEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 180 VAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIF 259 (514)
Q Consensus 180 v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 259 (514)
|+|+|||.||.+|++.||+||+|| ++++||+++.+++...+..++++||+.+.++++++.|.+.+|+..+...+
T Consensus 409 v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~ 482 (499)
T TIGR01494 409 VAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAA 482 (499)
T ss_pred EEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 48889999999999999999999999999999999999999999766554
Q ss_pred H
Q 010234 260 F 260 (514)
Q Consensus 260 ~ 260 (514)
+
T Consensus 483 ~ 483 (499)
T TIGR01494 483 L 483 (499)
T ss_pred H
Confidence 4
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-24 Score=194.84 Aligned_cols=181 Identities=39% Similarity=0.696 Sum_probs=148.9
Q ss_pred CCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 010234 267 PEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLG 346 (514)
Q Consensus 267 ~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (514)
|.|+++.|++|+|+++|.+|+++++.+|+|+++|+|+|+++++++++++.+.+.+.+|++.++.+++.|+..... .+
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~---~~ 77 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI---FG 77 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS---TC
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc---cc
Confidence 578999999999999999999999999999999999999999999999999989889999999888877765531 00
Q ss_pred ccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCC
Q 010234 347 INLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSED 426 (514)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~ 426 (514)
. . ..........++|++|.+++++|+++.+++|+++
T Consensus 78 ~-----~---------------------------------------~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~ 113 (182)
T PF00689_consen 78 W-----D---------------------------------------EETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR 113 (182)
T ss_dssp S-----S---------------------------------------SHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS
T ss_pred c-----c---------------------------------------cccchhHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 0 0 0000001256999999999999999999999999
Q ss_pred CCccc-cCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHHHHHHHHHHHH
Q 010234 427 GSLLT-MPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFV 494 (514)
Q Consensus 427 ~s~~~-~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K~~ 494 (514)
.+.|+ .+.++|++++.+++++++++++++|+|+++..|++.++++.+|+++++++++.++++|++|++
T Consensus 114 ~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 114 RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99998 788899999999999999999999999999999999999999999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-23 Score=216.83 Aligned_cols=174 Identities=39% Similarity=0.601 Sum_probs=158.8
Q ss_pred HHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHHHHcC
Q 010234 21 DALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAG 100 (514)
Q Consensus 21 ~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l~~~G 100 (514)
+.+++++++|.|++.++. |.+++|.+.++|+++|+++++|+.|+++|
T Consensus 354 ~~~~~~~~~g~~~~~v~~---------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g 400 (556)
T TIGR01525 354 DLLNEGESQGKTVVFVAV---------------------------------DGELLGVIALRDQLRPEAKEAIAALKRAG 400 (556)
T ss_pred HHHHHHhhCCcEEEEEEE---------------------------------CCEEEEEEEecccchHhHHHHHHHHHHcC
Confidence 455667778888877773 23789999999999999999999999999
Q ss_pred -CcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhCCCE
Q 010234 101 -IRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEV 179 (514)
Q Consensus 101 -i~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~ 179 (514)
+++.++|||+...+..+++++|+.. +|.+..|++|.++++.++..+++
T Consensus 401 ~i~v~ivTgd~~~~a~~i~~~lgi~~-------------------------------~f~~~~p~~K~~~v~~l~~~~~~ 449 (556)
T TIGR01525 401 GIKLVMLTGDNRSAAEAVAAELGIDE-------------------------------VHAELLPEDKLAIVKELQEEGGV 449 (556)
T ss_pred CCeEEEEeCCCHHHHHHHHHHhCCCe-------------------------------eeccCCHHHHHHHHHHHHHcCCE
Confidence 9999999999999999999999942 56777899999999999999999
Q ss_pred EEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 180 VAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIF 259 (514)
Q Consensus 180 v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 259 (514)
|+|+|||.||++|++.||+|++|| ++++.+++.||+++.+++..++.++++.||+.+.++++++.|.+.+|+..+...+
T Consensus 450 v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 450 VAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred EEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 7888889999999999999999999999999999999999999999998865443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8e-23 Score=225.72 Aligned_cols=177 Identities=32% Similarity=0.463 Sum_probs=162.3
Q ss_pred HHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHH
Q 010234 17 NLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDC 96 (514)
Q Consensus 17 ~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l 96 (514)
+.+.+.+++++++|.+++.+|+. ..++|++.++|+++|++.++|++|
T Consensus 616 ~~~~~~~~~~~~~g~~~v~va~~---------------------------------~~~~g~~~l~d~~r~~a~~~i~~L 662 (834)
T PRK10671 616 KALEAEITAQASQGATPVLLAVD---------------------------------GKAAALLAIRDPLRSDSVAALQRL 662 (834)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEC---------------------------------CEEEEEEEccCcchhhHHHHHHHH
Confidence 34556677888899999888853 257999999999999999999999
Q ss_pred HHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhC
Q 010234 97 RAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKED 176 (514)
Q Consensus 97 ~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~ 176 (514)
++.|++++++|||+..++..+++++|+.. +++...|++|.++++.++.+
T Consensus 663 ~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-------------------------------~~~~~~p~~K~~~i~~l~~~ 711 (834)
T PRK10671 663 HKAGYRLVMLTGDNPTTANAIAKEAGIDE-------------------------------VIAGVLPDGKAEAIKRLQSQ 711 (834)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcCCCE-------------------------------EEeCCCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999942 66778899999999999999
Q ss_pred CCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH
Q 010234 177 GEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVA 256 (514)
Q Consensus 177 ~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 256 (514)
+++|+|+|||.||++|++.||+||||| ++++.++++||+++.+++..++.++++.||+.+.++++++.|.+.+|++.+.
T Consensus 712 ~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 712 GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 7899999999999999999999999999999999999999999999988765
Q ss_pred HH
Q 010234 257 SI 258 (514)
Q Consensus 257 ~~ 258 (514)
..
T Consensus 791 ~a 792 (834)
T PRK10671 791 IA 792 (834)
T ss_pred HH
Confidence 44
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=209.57 Aligned_cols=160 Identities=38% Similarity=0.569 Sum_probs=148.9
Q ss_pred ccCCcEEEEEecccCCCChhHHHHHHHHHHcCC-cEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHH
Q 010234 69 MECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGI-RVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKK 147 (514)
Q Consensus 69 ~e~~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi-~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 147 (514)
+..|..++|.+.++|+++|+++++|++|+++|+ +++++|||+...+..+++++|+..
T Consensus 347 v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------- 404 (536)
T TIGR01512 347 VARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------- 404 (536)
T ss_pred EEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh----------------------
Confidence 456889999999999999999999999999999 999999999999999999999943
Q ss_pred HHHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHH
Q 010234 148 AHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIV 227 (514)
Q Consensus 148 ~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~ 227 (514)
++++..|++|.++++.++..+++|+|+|||.||++|++.||+|++||.++++.+++.||+++.+++..++.
T Consensus 405 ---------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~ 475 (536)
T TIGR01512 405 ---------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLP 475 (536)
T ss_pred ---------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHH
Confidence 45666799999999999999999999999999999999999999999667888899999999999999999
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 228 SAVGEGRSIYNNMKAFIRYMISSNIGEVASIF 259 (514)
Q Consensus 228 ~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 259 (514)
++++.||+++.++++++.|.+.+|+..+...+
T Consensus 476 ~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 476 QAIRLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988765543
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=205.82 Aligned_cols=157 Identities=36% Similarity=0.604 Sum_probs=146.6
Q ss_pred ccCCcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 69 MECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 69 ~e~~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
+..|.+++|++.++|+++|+++++|++|+++|++++++|||+...+..+++++|+.
T Consensus 390 ~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------ 445 (562)
T TIGR01511 390 VAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------ 445 (562)
T ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------
Confidence 45688999999999999999999999999999999999999999999999999983
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHH
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVS 228 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~ 228 (514)
++++..|++|.++++.++.++++|+|+|||.||.+|+++||+||+|| ++.+.+++.||+++.+++...+.+
T Consensus 446 --------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~ 516 (562)
T TIGR01511 446 --------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVAT 516 (562)
T ss_pred --------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHH
Confidence 34566789999999999999999999999999999999999999999 788999999999999999999999
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 010234 229 AVGEGRSIYNNMKAFIRYMISSNIGEVASI 258 (514)
Q Consensus 229 ~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 258 (514)
+++.||+.++++++++.|.+.+|++.+...
T Consensus 517 ~i~lsr~~~~~i~qn~~~a~~~n~~~i~la 546 (562)
T TIGR01511 517 AIDLSRKTLRRIKQNLLWAFGYNVIAIPIA 546 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999865443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-21 Score=187.15 Aligned_cols=137 Identities=38% Similarity=0.598 Sum_probs=128.7
Q ss_pred CCcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHH
Q 010234 71 CGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHL 150 (514)
Q Consensus 71 ~~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (514)
.|-.++|++.++|-++|+.+|-.++||+.||+.+|+|||++.+|..++.+.|+++
T Consensus 434 ~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------- 488 (681)
T COG2216 434 ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------- 488 (681)
T ss_pred ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-------------------------
Confidence 3447899999999999999999999999999999999999999999999999964
Q ss_pred hhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 151 RQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 151 ~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
..+.++|++|.++++.-|..++-|+|+|||.||.|+|.+||+|+||. +++..+|++++.|-.|.|...+.+.+
T Consensus 489 ------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV 561 (681)
T COG2216 489 ------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVV 561 (681)
T ss_pred ------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHh
Confidence 46788999999999999999999999999999999999999999997 99999999999999999999999999
Q ss_pred HHhHhHHHH
Q 010234 231 GEGRSIYNN 239 (514)
Q Consensus 231 ~~gr~~~~~ 239 (514)
+-|++++-.
T Consensus 562 ~IGKqlLiT 570 (681)
T COG2216 562 EIGKQLLIT 570 (681)
T ss_pred hhhhhheee
Confidence 999986643
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.5e-16 Score=151.18 Aligned_cols=65 Identities=25% Similarity=0.332 Sum_probs=58.9
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..++++++...++|++||||.||++||+.||+||||| |+.+.+|+.||+|+.+++.+|++++|++
T Consensus 202 ~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 202 KSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred HHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 5566667777899999999999999999999999999 7788889999999999999999999964
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.2e-16 Score=148.89 Aligned_cols=148 Identities=28% Similarity=0.362 Sum_probs=103.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcc----cCc--------cceecccChHHHhhhhH------
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFE----CNE--------DISLKSLTGKEFMEMHD------ 145 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~----~~~--------~~~~~~~~~~~~~~~~~------ 145 (514)
++++.++++|++++++|++++++|||+...+..+.+++++.. .+. .+....++.+....+.+
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 99 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQ 99 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhcc
Confidence 389999999999999999999999999999999999999853 111 11111111111111000
Q ss_pred ----------------------------------------------------------HHHHHhh---cCceEEEecC--
Q 010234 146 ----------------------------------------------------------KKAHLRQ---SGGLLFSRAE-- 162 (514)
Q Consensus 146 ----------------------------------------------------------~~~~~~~---~~~~i~~~~~-- 162 (514)
....+.. .....+.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~ 179 (264)
T COG0561 100 GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPI 179 (264)
T ss_pred CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCc
Confidence 0000000 0111111111
Q ss_pred -------hhhH----HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 163 -------PRHK----QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 163 -------p~~k----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
..+| ..+++.++...++|++|||+.||++||+.||.||||| |+++.+|+.||+++.+++.+||+++++
T Consensus 180 ~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~ 258 (264)
T COG0561 180 SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALE 258 (264)
T ss_pred eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHH
Confidence 1334 5566666777788999999999999999999999999 568888999999999999999999997
Q ss_pred H
Q 010234 232 E 232 (514)
Q Consensus 232 ~ 232 (514)
+
T Consensus 259 ~ 259 (264)
T COG0561 259 K 259 (264)
T ss_pred H
Confidence 5
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.8e-16 Score=150.53 Aligned_cols=65 Identities=22% Similarity=0.276 Sum_probs=57.7
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccc--ccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASD--MVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad--~v~~~~~~~~i~~~i~~ 232 (514)
..++++++...++|++|||+.||++||+.||+||||| |+.+.+|+.|| +|+.+++.+|++++|++
T Consensus 196 ~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 196 EAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred HHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 5566667777899999999999999999999999999 77888899987 78899999999999964
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.9e-16 Score=149.69 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=57.9
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccc--cccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDM--VLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~--v~~~~~~~~i~~~i~~ 232 (514)
..++++++...++|++|||+.||++||+.||+||||| |+.+.+|++||+ ++.+++.+|++++|++
T Consensus 194 ~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~~ 260 (272)
T PRK15126 194 AVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLTH 260 (272)
T ss_pred HHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHHH
Confidence 5566667778899999999999999999999999999 788888999997 7889999999999954
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.8e-15 Score=154.47 Aligned_cols=65 Identities=26% Similarity=0.435 Sum_probs=58.3
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..++++++...++|++||||.||++||+.||+||||| |+.+.+|+.||+|+.+++.+||+++|++
T Consensus 513 k~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 513 KMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred HHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 4556666777889999999999999999999999999 7788889999999999999999999964
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-15 Score=142.03 Aligned_cols=146 Identities=25% Similarity=0.292 Sum_probs=102.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcc----cCccc----------eecccChHHHhhhhHH---
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFE----CNEDI----------SLKSLTGKEFMEMHDK--- 146 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~----~~~~~----------~~~~~~~~~~~~~~~~--- 146 (514)
++++.+.++|++++++|++++++|||+...+..+++.+|+.. .+... ....+. ....+.+.
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~--~~~~~~~~~~~ 97 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIE--ECEKAYSELKK 97 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchH--HHHHHHHHHHH
Confidence 489999999999999999999999999999999999998742 11111 000000 00000000
Q ss_pred --------------------------------HHHHhhcC-ceE------EEecCh--hhH----HHHHHHHhhCCCEEE
Q 010234 147 --------------------------------KAHLRQSG-GLL------FSRAEP--RHK----QEIVRLLKEDGEVVA 181 (514)
Q Consensus 147 --------------------------------~~~~~~~~-~~i------~~~~~p--~~k----~~iv~~l~~~~~~v~ 181 (514)
........ ... +....| .+| ..+++.++...++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i 177 (230)
T PRK01158 98 RFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVA 177 (230)
T ss_pred hccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 00000000 000 111121 123 556666777788999
Q ss_pred EEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 182 MTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 182 ~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
+|||+.||++|++.||+|+||| |+.+.+|+.||+++.+++.+|+++++++
T Consensus 178 ~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 178 AIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred EECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 9999999999999999999999 7788889999999999999999999864
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=5e-15 Score=118.47 Aligned_cols=127 Identities=26% Similarity=0.377 Sum_probs=108.9
Q ss_pred CcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHh
Q 010234 72 GLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151 (514)
Q Consensus 72 ~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (514)
-....+.++--.++-+++.++|++|++. ++++++|||...+....|+..|+..
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~-------------------------- 70 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV-------------------------- 70 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce--------------------------
Confidence 3567899999999999999999999999 9999999999999999999999854
Q ss_pred hcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceee-CC-CCcHHHHhcccccccCCCchhHHHH
Q 010234 152 QSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAM-GI-AGTEVAKEASDMVLADDDFSTIVSA 229 (514)
Q Consensus 152 ~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvam-g~-~~~~~~k~~ad~v~~~~~~~~i~~~ 229 (514)
..+++-..|+.|.++++.|+.+++.|+|+|||.||.+||+.||+||+. ++ +.++.+...||+++. +...++++
T Consensus 71 ---~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 71 ---ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred ---eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 347888899999999999999999999999999999999999999865 32 345566788999986 34444443
Q ss_pred H
Q 010234 230 V 230 (514)
Q Consensus 230 i 230 (514)
+
T Consensus 146 ~ 146 (152)
T COG4087 146 L 146 (152)
T ss_pred h
Confidence 3
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.2e-16 Score=144.58 Aligned_cols=97 Identities=47% Similarity=0.835 Sum_probs=92.2
Q ss_pred CcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHh
Q 010234 72 GLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151 (514)
Q Consensus 72 ~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (514)
+..++|.+.+.|+++|++.++|+.|+++|++++|+|||+..++..+++++|+..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999943
Q ss_pred hcCceEEEec--ChhhH--HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcC
Q 010234 152 QSGGLLFSRA--EPRHK--QEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 197 (514)
Q Consensus 152 ~~~~~i~~~~--~p~~k--~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 197 (514)
..++++. +|++| .++++.++.++++|+|+|||.||++|+++||
T Consensus 169 ---~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 ---SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ---EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ---ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 4588899 99999 9999999988889999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.7e-15 Score=141.33 Aligned_cols=65 Identities=26% Similarity=0.373 Sum_probs=57.5
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
.++++.++...+++++|||+.||++|++.||+||||| ++.+.+|+.||+++.+++.+|++++|++
T Consensus 205 ~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 205 TQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred HHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 4566666777889999999999999999999999999 5677779999999999999999999964
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.5e-15 Score=136.78 Aligned_cols=147 Identities=22% Similarity=0.271 Sum_probs=99.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc----Cccce--------ecccChHHHhhhhHH----
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC----NEDIS--------LKSLTGKEFMEMHDK---- 146 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~----~~~~~--------~~~~~~~~~~~~~~~---- 146 (514)
.++.+++.++|++|+++|++++++|||+...+..+++.+++... +..+. ........+......
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 35899999999999999999999999999999999999987421 11110 000000000000000
Q ss_pred -------------------------HHHHhhcCc-------eEEEecChhhHHH----HHHHHhhCCCEEEEEcCCcCCH
Q 010234 147 -------------------------KAHLRQSGG-------LLFSRAEPRHKQE----IVRLLKEDGEVVAMTGDGVNDA 190 (514)
Q Consensus 147 -------------------------~~~~~~~~~-------~i~~~~~p~~k~~----iv~~l~~~~~~v~~iGDg~ND~ 190 (514)
......... .+.......+|.. +++.++...+++++|||+.||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000000000 0111122345544 4444556677899999999999
Q ss_pred HhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 191 PALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 191 ~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+|++.||+|+||+ |+.+.+|+.||+++.+++.+|++++|
T Consensus 177 ~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 177 DLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 9999999999999 77888899999999999999998764
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-14 Score=136.82 Aligned_cols=63 Identities=27% Similarity=0.368 Sum_probs=55.6
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
..+++.++...+++++|||+.||++||+.||.||||+ ++++.+|+.||+++.+++.+|++++|
T Consensus 192 ~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 192 KYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp HHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred HHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHhC
Confidence 5566666777899999999999999999999999999 77777799999999999999999875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-14 Score=136.16 Aligned_cols=148 Identities=22% Similarity=0.251 Sum_probs=99.6
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc----Ccc----------ceecccChHHHhhhhH---
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC----NED----------ISLKSLTGKEFMEMHD--- 145 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~----~~~----------~~~~~~~~~~~~~~~~--- 145 (514)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+... +.. .....+..........
T Consensus 14 ~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (225)
T TIGR01482 14 RAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT 93 (225)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcc
Confidence 35889999999999999999999999999999999999985321 111 0011111100000000
Q ss_pred -------------------------H--HHHHhhcCceE-------EEecCh--hhH----HHHHHHHhhCCCEEEEEcC
Q 010234 146 -------------------------K--KAHLRQSGGLL-------FSRAEP--RHK----QEIVRLLKEDGEVVAMTGD 185 (514)
Q Consensus 146 -------------------------~--~~~~~~~~~~i-------~~~~~p--~~k----~~iv~~l~~~~~~v~~iGD 185 (514)
+ ..........+ +....| .+| ..+++.++...+++++|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0 00000000000 111111 244 4555666777889999999
Q ss_pred CcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchh----HHHHHH
Q 010234 186 GVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFST----IVSAVG 231 (514)
Q Consensus 186 g~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~----i~~~i~ 231 (514)
+.||++|++.||+|+||+ |+.+.+|+.||+|+.+++.+| +.++++
T Consensus 174 ~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred CHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999 678888999999999999999 777664
|
catalyze the same reaction as SPP. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.56 E-value=5e-14 Score=135.94 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=56.9
Q ss_pred HHHHHHHhh---CCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHH-----HHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKE---DGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEV-----AKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~---~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~-----~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..++++++. ..++|++||||.||++||+.||+|||||++..+. .+..||+++...+.+|+.+++++
T Consensus 193 ~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 193 NWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred HHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 667788888 8899999999999999999999999999655331 45579999999999999999864
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.8e-13 Score=131.03 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=56.4
Q ss_pred HHHHHHHhhC--CCEEEEEcCCcCCHHhhhhcCcceeeCCCCc--HHHHhc--c-cccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKED--GEVVAMTGDGVNDAPALKLADIGIAMGIAGT--EVAKEA--S-DMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~igvamg~~~~--~~~k~~--a-d~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++.. .+++++|||+.||++||+.||+||||+|+.. +.+|+. | ++|+.+++.+|+++++++
T Consensus 182 ~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 182 NALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 5677777777 8999999999999999999999999995542 456886 4 599999999999999865
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.1e-13 Score=128.62 Aligned_cols=63 Identities=32% Similarity=0.384 Sum_probs=54.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
..+++.++...+++++|||+.||++|++.||+|+||+ ++.+.+|+.||+++.+++.+||+++|
T Consensus 194 ~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 194 QSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred HHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 4444555556789999999999999999999999999 67777899999999999999998754
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.2e-13 Score=117.75 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=91.9
Q ss_pred HHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHH
Q 010234 91 QAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIV 170 (514)
Q Consensus 91 ~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv 170 (514)
.+|+.|+++|+++.++|+++...+....+.+|+..... .....|+....++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~-----------------------------~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE-----------------------------GIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe-----------------------------cCCCCHHHHHHHH
Confidence 78999999999999999999999999999999963211 0134567778889
Q ss_pred HHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHH
Q 010234 171 RLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIV 227 (514)
Q Consensus 171 ~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~ 227 (514)
+.++...+++++|||+.||++|++.||+++||+ ++.+.+|..|++|+.+++.+|+.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCHH
Confidence 999988999999999999999999999999999 67777799999999877777654
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.7e-12 Score=122.35 Aligned_cols=64 Identities=17% Similarity=0.203 Sum_probs=53.2
Q ss_pred HHHHHHhhCC-CEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHH----hcc-cccc--cCCCchhHHHHHHH
Q 010234 168 EIVRLLKEDG-EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAK----EAS-DMVL--ADDDFSTIVSAVGE 232 (514)
Q Consensus 168 ~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k----~~a-d~v~--~~~~~~~i~~~i~~ 232 (514)
++.+.++... ++|++|||+.||++|++.||+|+||+ |+.+.+| .+| +.++ ..++.+|+++++++
T Consensus 197 ~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 197 WLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred HHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 4445556778 99999999999999999999999999 6666657 666 6777 67889999999854
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.1e-12 Score=112.03 Aligned_cols=110 Identities=20% Similarity=0.244 Sum_probs=91.7
Q ss_pred HHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHH
Q 010234 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVR 171 (514)
Q Consensus 92 ~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~ 171 (514)
+|++|+++|+++.++||++...+..+++.+|+..... .....|+...++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~-----------------------------~~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQ-----------------------------GQSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEe-----------------------------cccchHHHHHHHHH
Confidence 8999999999999999999999999999999864211 01234566677788
Q ss_pred HHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchh-HHHHHH
Q 010234 172 LLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFST-IVSAVG 231 (514)
Q Consensus 172 ~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~-i~~~i~ 231 (514)
.++...++++++||+.||++|++.||++++|. ++.+..+..|++++.++..+| +.++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 88888899999999999999999999999998 666777999999998887665 776664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.8e-12 Score=124.30 Aligned_cols=134 Identities=17% Similarity=0.251 Sum_probs=98.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcc-ce--ecccChHHHhhhhHHHHHHhhcCceEEE
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNED-IS--LKSLTGKEFMEMHDKKAHLRQSGGLLFS 159 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (514)
-++.|++.+.|+.|++.|+++.++||.....+..+.+++|+...... +. ...+++.. ....+..
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v-------------~g~iv~~ 246 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNV-------------LGDIVDA 246 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEe-------------cCccCCc
Confidence 36899999999999999999999999998889999999998542110 00 00000000 0000111
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
...++--.++.+.++...+++++||||.||++|++.||+|||| ++.+.+++.||.++..++.++++.++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2223333455566666789999999999999999999999999 567777999999999999999998773
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.7e-11 Score=109.98 Aligned_cols=130 Identities=15% Similarity=0.124 Sum_probs=98.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccCh-HHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTG-KEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.|++.+.|+.+++.| +++++||.....+..+++++|+....... ..+.+ ..+ . ... ...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~--l~~~~~g~~------------t-G~~--~~~ 129 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHK--LEIDDSDRV------------V-GYQ--LRQ 129 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhcee--eEEecCCee------------E-Cee--ecC
Confidence 68999999999999975 99999999999999999999996421100 00000 000 0 000 134
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHh
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEG 233 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 233 (514)
++.|...++.++..+.+++++|||.||++|++.||+||++. +.+.++++||-...-.+.+.+...+.++
T Consensus 130 ~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 130 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred cchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 67899999999888889999999999999999999999995 5666677777666667888888888765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.8e-11 Score=112.83 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=54.7
Q ss_pred HHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccc----ccccCCCchhHHHHHHH
Q 010234 168 EIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASD----MVLADDDFSTIVSAVGE 232 (514)
Q Consensus 168 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad----~v~~~~~~~~i~~~i~~ 232 (514)
.+++.++...+++++|||+.||++|++.+|+||+|+ |+.+.+|+.|+ +|+.+++.+|++++|++
T Consensus 166 ~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 166 YLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred HHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 344444555678999999999999999999999999 67777799999 88889999999999965
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.6e-11 Score=108.80 Aligned_cols=121 Identities=20% Similarity=0.215 Sum_probs=87.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.+++|++.+.++.++++|++++++||-...-+.++++.+|++.......... +| . ....++...+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~-dG-~------------ltG~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEID-DG-K------------LTGRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEe-CC-E------------EeceeeeeecC
Confidence 5789999999999999999999999999999999999999975332211000 00 0 00122333444
Q ss_pred hhhHHHHH----HHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccccccc
Q 010234 163 PRHKQEIV----RLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLA 219 (514)
Q Consensus 163 p~~k~~iv----~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~ 219 (514)
.+.|.+.+ +.++...++++++|||.||.|||+.||.++++. +.+..+..|+....
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 45665544 444555678999999999999999999999984 55555666766553
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=109.88 Aligned_cols=150 Identities=12% Similarity=0.161 Sum_probs=95.9
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc------Cccceecc---cChHHH------------
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC------NEDISLKS---LTGKEF------------ 140 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~------~~~~~~~~---~~~~~~------------ 140 (514)
+.++.|.+.+++++++++|++++++|||+...++.+.+++++..+ +....... .....+
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 345789999999999999999999999999999999998886432 11111000 000000
Q ss_pred -hhhh------------------------H-H--------HHHHhhc--CceE-E-------EecChhhHHHHH----HH
Q 010234 141 -MEMH------------------------D-K--------KAHLRQS--GGLL-F-------SRAEPRHKQEIV----RL 172 (514)
Q Consensus 141 -~~~~------------------------~-~--------~~~~~~~--~~~i-~-------~~~~p~~k~~iv----~~ 172 (514)
..+. . . ....... ...+ . .......|...+ +.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 0 0 0000000 0000 1 111223454444 44
Q ss_pred HhhCCCEEEEEcCCcCCHHhhhh-cCcceeeCCCCcHHHHhccc-------ccccCCCchhHHHHHHH
Q 010234 173 LKEDGEVVAMTGDGVNDAPALKL-ADIGIAMGIAGTEVAKEASD-------MVLADDDFSTIVSAVGE 232 (514)
Q Consensus 173 l~~~~~~v~~iGDg~ND~~ml~~-A~igvamg~~~~~~~k~~ad-------~v~~~~~~~~i~~~i~~ 232 (514)
++...++++++||+.||++|++. ++.||||+ |+.+.+|+.++ +++.....+|+++++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 45667899999999999999998 67999999 66666676543 77788889999999864
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=8.4e-11 Score=98.03 Aligned_cols=118 Identities=21% Similarity=0.353 Sum_probs=92.3
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPR 164 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 164 (514)
++++ ..|+.|.+.||++.++|||+...++.-++++|+..-... -+
T Consensus 38 v~DG--~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG---------------------------------~~ 82 (170)
T COG1778 38 VRDG--HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG---------------------------------IS 82 (170)
T ss_pred ccCc--HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec---------------------------------hH
Confidence 3444 678999999999999999999999999999999642111 12
Q ss_pred hH----HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchh----HHHHHHHhHhH
Q 010234 165 HK----QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFST----IVSAVGEGRSI 236 (514)
Q Consensus 165 ~k----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~----i~~~i~~gr~~ 236 (514)
+| .++.+.++...++|+++||..||.|+|+.+|+++|+. ++.+.+++.||+|+....-.| +.++|-.++..
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~ 161 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGK 161 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCc
Confidence 33 4566677778899999999999999999999999999 677777999999997665443 44555555554
Q ss_pred HH
Q 010234 237 YN 238 (514)
Q Consensus 237 ~~ 238 (514)
++
T Consensus 162 ~d 163 (170)
T COG1778 162 LD 163 (170)
T ss_pred HH
Confidence 44
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.5e-11 Score=106.11 Aligned_cols=108 Identities=20% Similarity=0.236 Sum_probs=87.5
Q ss_pred HHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHH
Q 010234 91 QAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIV 170 (514)
Q Consensus 91 ~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv 170 (514)
.+|+.|+++|+++.++||++...+..+++++|+..... + ....++.-.+++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g---------------------~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G---------------------QSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C---------------------CCcHHHHHHHHH
Confidence 68999999999999999999999999999999853210 0 011234556777
Q ss_pred HHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHH
Q 010234 171 RLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVS 228 (514)
Q Consensus 171 ~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~ 228 (514)
+.++..++++++|||+.||++|++.||++++++ ++.+..+..||+++..+..+|...
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~ 162 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVR 162 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHH
Confidence 788888899999999999999999999999998 677777889999997666555543
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-09 Score=110.97 Aligned_cols=65 Identities=18% Similarity=0.279 Sum_probs=49.1
Q ss_pred HHHHHHH---hhCCCEEEEEcCCcCCHHhhhhcC-cceeeCCCCcHHHHhcc--------ccc-ccCCCchhHHHHHHH
Q 010234 167 QEIVRLL---KEDGEVVAMTGDGVNDAPALKLAD-IGIAMGIAGTEVAKEAS--------DMV-LADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l---~~~~~~v~~iGDg~ND~~ml~~A~-igvamg~~~~~~~k~~a--------d~v-~~~~~~~~i~~~i~~ 232 (514)
..+++.+ +...+++++|||+.||++||+.+| +||||| |+.+.+|+.+ +++ ..+++.+||.+++++
T Consensus 181 ~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 181 AYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred HHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 3344444 556789999999999999999999 799999 5666667643 333 246678999999965
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.1e-10 Score=104.55 Aligned_cols=131 Identities=21% Similarity=0.304 Sum_probs=93.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcccee---cccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISL---KSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
++.|++.+.|+.|+++|++++++||.....+..+.+.+|+......... ..+++.. ........
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLV-------------EGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEe-------------cCcccCCc
Confidence 5899999999999999999999999999999999999998642111000 0000000 00000111
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSA 229 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~ 229 (514)
+.|.--.++++.++...+++++|||+.||+++++.||++++++ +.+.++++||+++.+.++..++.+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 1333334555566667789999999999999999999999985 567778899999998887776654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.96 E-value=9.2e-09 Score=96.20 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=36.8
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCc
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~ 124 (514)
..+.++++|++|+++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4555999999999999999999999999999999999875
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.94 E-value=9e-09 Score=96.11 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=39.0
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCc
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~ 124 (514)
++...+++.++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556778999999999999999999999999999999999973
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=3e-08 Score=95.01 Aligned_cols=140 Identities=12% Similarity=0.145 Sum_probs=84.5
Q ss_pred CCChhHHHHHHHHHH-cCCcEEEECCCChHHHHHHHHHcCC--cccCccc--------eecccChHHHhhhhHHHH----
Q 010234 84 PPRNEVHQAIEDCRA-AGIRVMVITGDNKNTAEAICREIGV--FECNEDI--------SLKSLTGKEFMEMHDKKA---- 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~-~Gi~v~i~TG~~~~~a~~ia~~~gi--~~~~~~~--------~~~~~~~~~~~~~~~~~~---- 148 (514)
.+.+++.++|++|++ .|++++++|||+...+..+.+.+++ ...+... ....+..+....+.+...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 678999999999998 7999999999999999988877663 1211111 111111111111100000
Q ss_pred ---------------------------------HHh-hcC--------ceEEEecChhhHHHH----HHHHhhCCCEEEE
Q 010234 149 ---------------------------------HLR-QSG--------GLLFSRAEPRHKQEI----VRLLKEDGEVVAM 182 (514)
Q Consensus 149 ---------------------------------~~~-~~~--------~~i~~~~~p~~k~~i----v~~l~~~~~~v~~ 182 (514)
... ... ..+-.+....+|... ++.++...+.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000 000 011112222355444 4444455678999
Q ss_pred EcCCcCCHHhhhhc----CcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 183 TGDGVNDAPALKLA----DIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 183 iGDg~ND~~ml~~A----~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+||+.||.+||+.+ ++||+||+ +.+. |++.+. +..++...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~-a~~~----A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGT-GATQ----ASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECC-CCCc----CeEeCC--CHHHHHHHH
Confidence 99999999999999 99999994 4333 677664 555555555
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-08 Score=94.18 Aligned_cols=127 Identities=20% Similarity=0.336 Sum_probs=98.6
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
+.++-|++.++++.|+++|++..++|+++...+..+.+..|+......+.. ++ ..-..++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----~~----------------~~~~~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----GD----------------DVPPPKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc----CC----------------CCCCCCc
Confidence 456889999999999999999999999999999999999999765443221 00 1223346
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcC---cceeeCCC-CcHHHHhcccccccCCCchhHHHHH
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD---IGIAMGIA-GTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~---igvamg~~-~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+|.....+++.++..+++++||||+.+|+.|-+.|| +||..|.+ ..+.....+|+++. +...+...+
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 778888999999988779999999999999999999 77888854 34455566888875 344444333
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.6e-08 Score=90.99 Aligned_cols=126 Identities=21% Similarity=0.293 Sum_probs=89.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEE--ec
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFS--RA 161 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~ 161 (514)
++.|++.+.++.|+++ ++++++|+.....+..+.+++|+........ ....+ ..+.. ..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~--~~~~~----------------~~i~~~~~~ 128 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSL--EVDED----------------GMITGYDLR 128 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceE--EECCC----------------CeEECcccc
Confidence 4689999999999999 9999999999999999999999853211000 00000 00100 12
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccc-cccCCCchhHHHHHH
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDM-VLADDDFSTIVSAVG 231 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~-v~~~~~~~~i~~~i~ 231 (514)
.|..|...++.++..++++++||||.||++|.+.||+|++++ ...+.....+++ +. ++...+...++
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 456788888889888999999999999999999999999886 444444445555 33 34455555443
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.2e-08 Score=100.84 Aligned_cols=47 Identities=9% Similarity=0.119 Sum_probs=40.1
Q ss_pred EEeccc-CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCC
Q 010234 77 GLVGLR-DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGV 123 (514)
Q Consensus 77 G~~~~~-~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi 123 (514)
|++.-. +...+.+.++|++|+++|++++++|||+...+..+++++|+
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 444433 34667899999999999999999999999999999999986
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.4e-06 Score=89.80 Aligned_cols=97 Identities=22% Similarity=0.353 Sum_probs=70.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
+..|++.+.+++++++|++++++|+.+...++.+++.+|+.+. + +..++ ..+..|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~---V----igsd~------------------~~~~kg 126 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG---V----FASDG------------------TTNLKG 126 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE---E----EeCCC------------------ccccCC
Confidence 4679999999999999999999999999999999999997221 1 00000 012334
Q ss_pred hhHHHHHH-HHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcH
Q 010234 164 RHKQEIVR-LLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTE 208 (514)
Q Consensus 164 ~~k~~iv~-~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~ 208 (514)
+.|.+.+. .+++ +.+.++||+.+|++|++.|+-+++++ .+..
T Consensus 127 ~~K~~~l~~~l~~--~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 127 AAKAAALVEAFGE--RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred chHHHHHHHHhCc--cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 44544333 3332 33678999999999999999999997 4443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-07 Score=90.11 Aligned_cols=54 Identities=24% Similarity=0.279 Sum_probs=42.1
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CcCCHHhhhhc-CcceeeCCCCcHHHHhcccccc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGD----GVNDAPALKLA-DIGIAMGIAGTEVAKEASDMVL 218 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~A-~igvamg~~~~~~~k~~ad~v~ 218 (514)
.+|..-++.+.+..++|++||| |.||++||+.| -.|++++ |+++.+|..+..+.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4677777777666899999999 99999999966 3556667 77888788776544
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.7e-08 Score=89.89 Aligned_cols=117 Identities=19% Similarity=0.210 Sum_probs=78.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.|+.|+++|++++++|+.....+..+++.+|+....... ....+. .. .. ...+....+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~--g~-------~~--p~~~~~~~~ 145 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNE---LVFDEK--GF-------IQ--PDGIVRVTF 145 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEE---EEEcCC--Ce-------Ee--cceeeEEcc
Confidence 58999999999999999999999999999999999999975321110 000000 00 00 001111223
Q ss_pred hhHHHH----HHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccc
Q 010234 164 RHKQEI----VRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASD 215 (514)
Q Consensus 164 ~~k~~i----v~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad 215 (514)
..|.++ .+.++...++++++||+.||++|++.||++++++ ......+.++|
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 344444 4445556788999999999999999999999997 33333333333
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.9e-08 Score=88.10 Aligned_cols=126 Identities=19% Similarity=0.279 Sum_probs=92.0
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.+++++|+++|+++.++||.+...+....+.+|+......+. ..+ .....++.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~----~~~----------------~~~~~KP~ 133 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVI----GSD----------------EVPRPKPA 133 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEE----ecC----------------cCCCCCCC
Confidence 3678999999999999999999999999999999999999854322111 000 11123556
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc---eeeCCC-CcHHHHhcccccccCCCchhHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---IAMGIA-GTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig---vamg~~-~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
|+--.++++.++..++++++|||+.+|+.+.+.+|+. +..|.. ..+..+..+|+++. +...+..++
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 134 PDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred hHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 6677888889998899999999999999999999964 444532 22344667888874 444444443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-07 Score=87.31 Aligned_cols=99 Identities=20% Similarity=0.300 Sum_probs=74.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccce--ecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDIS--LKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
++.|++.+.++.|+++|+++.++||.....+..+.+.+ +.. ..+. ...++++. ......
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~----------------~~~~kp 134 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEY----------------ITITWP 134 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCe----------------eEEecc
Confidence 68999999999999999999999999999999999987 633 1111 11112211 011111
Q ss_pred Ch----------hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 162 EP----------RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 162 ~p----------~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
.| ..|..+++.++..++++++||||.||++|.+.||+.++
T Consensus 135 ~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 135 HPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 11 24788999999888999999999999999999999776
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.4e-07 Score=86.89 Aligned_cols=128 Identities=22% Similarity=0.345 Sum_probs=92.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|+++|++++++||........+.+.+|+......+ +..+ ..-..+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~----~~~~----------------~~~~~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVV----IGGD----------------SLPNKKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEE----EcCC----------------CCCCCCcC
Confidence 468899999999999999999999999999999999999985432211 1100 00112334
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCC-CcHHHHhcccccccCCCchhHHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIA-GTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~-~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
|+--..+++.++.+.+++++|||+.||+++.+.+|+ +|..|.+ ..+.....+++++ ++...+...+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 566678888999999999999999999999999997 4433422 2334345677776 466666666644
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.8e-07 Score=84.76 Aligned_cols=110 Identities=18% Similarity=0.121 Sum_probs=75.7
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcccee--cccChHHHhhhhHHHHHHhhcCceEE--
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISL--KSLTGKEFMEMHDKKAHLRQSGGLLF-- 158 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~-- 158 (514)
.+++|++.+.++.|+++|+++.++||.....+..+++.++... .+.. ....+..+.. .......+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n~~~~~~~~~~~--------~~p~~~~~~~ 137 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNEADFSNEYIHI--------DWPHPCDGTC 137 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEeceeEeeCCeeEE--------eCCCCCcccc
Confidence 4689999999999999999999999999999999988874321 1110 1111111000 00000000
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 159 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 159 ~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
.......|..+++.++..++.+++||||.||++|++.||+.+|-+
T Consensus 138 ~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 138 QNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred ccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 000023588999999888899999999999999999999977644
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-07 Score=81.02 Aligned_cols=122 Identities=20% Similarity=0.291 Sum_probs=80.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChH-HHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGK-EFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
+++|++++.+..|++.|.++.++||.-...+.+++.++||+..+..-....+... ++... ...-.-+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gf-----------d~~~ptsd 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGF-----------DTNEPTSD 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccc-----------ccCCcccc
Confidence 5899999999999999999999999999999999999999763321111100000 00000 00000112
Q ss_pred hhhHHHHHHHHhhC--CCEEEEEcCCcCCHHhhhhcCcceeeCCC-CcHHHHhcccc
Q 010234 163 PRHKQEIVRLLKED--GEVVAMTGDGVNDAPALKLADIGIAMGIA-GTEVAKEASDM 216 (514)
Q Consensus 163 p~~k~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~igvamg~~-~~~~~k~~ad~ 216 (514)
...|.+++..+++. .+.++|||||.||++|+..|+.=++.|.+ -.+.+|..|+.
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~ 213 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKW 213 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHH
Confidence 24677788877764 46789999999999999998866665522 22333444443
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.5e-07 Score=87.04 Aligned_cols=125 Identities=14% Similarity=0.181 Sum_probs=92.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.++++.|+++|+++.++|+.+...+....+.+|+......+ +.++ ..-..++.
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~i----v~~~----------------~~~~~KP~ 166 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAV----IIGS----------------ECEHAKPH 166 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEE----EecC----------------cCCCCCCC
Confidence 357899999999999999999999999999999999999986543321 1111 11123566
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcHHHHhcccccccCCCchhHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTEVAKEASDMVLADDDFSTIV 227 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~~~k~~ad~v~~~~~~~~i~ 227 (514)
|+--..+++.++..++++++|||+.+|+.+-+.||+ ++.-|....+.....+|+++.+.....+.
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~~~ 234 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPKLW 234 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhHHH
Confidence 777788899999999999999999999999999995 44444222223344688888765543333
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.4e-06 Score=82.43 Aligned_cols=42 Identities=14% Similarity=0.234 Sum_probs=38.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCc
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~ 124 (514)
+...+.+.++|++|+++||+++++|||+...+..+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346788999999999999999999999999999999999984
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.5e-07 Score=84.31 Aligned_cols=125 Identities=22% Similarity=0.295 Sum_probs=90.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++||.....+....+.+|+......+. ..+ ..-..++.|
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~----~~~----------------~~~~~Kp~p 141 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVI----TLD----------------DVEHAKPDP 141 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEE----ecC----------------cCCCCCCCc
Confidence 478999999999999999999999999999999999999865332211 100 011134566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcH-HHHhcccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTE-VAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~-~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+--.++++.++..++++++|||+.+|+.+.++||+ +|+.|....+ .....+|+++. +...+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 142 EPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 77788889998889999999999999999999996 4444522223 32345777764 455555443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.3e-07 Score=82.22 Aligned_cols=39 Identities=23% Similarity=0.429 Sum_probs=36.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG 122 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~g 122 (514)
++.+++.++|++|+++|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 588999999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.5e-07 Score=78.83 Aligned_cols=114 Identities=19% Similarity=0.238 Sum_probs=79.8
Q ss_pred cccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEE
Q 010234 80 GLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFS 159 (514)
Q Consensus 80 ~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (514)
....++.+++.+.+++|+++|++++++||+....+....+.+|+......+... ......................
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITS----NGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheecc----chhhhhcccccccccccccccC
Confidence 344578999999999999999999999999999999999999874322211100 0000000000000111233444
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcC
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 197 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 197 (514)
+..++.+..+.+.++...+.++++||+.+|++|++.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcC
Confidence 66777788888898888899999999999999999955
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.4e-07 Score=85.01 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=85.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++|+.+...+..+.+..|+......+. .++ ..-..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~----~~~----------------~~~~~Kp~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLI----GGD----------------SLAQRKPHP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEE----ecC----------------CCCCCCCCh
Confidence 678999999999999999999999999999999999999864322211 000 011124556
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee---eCCCCc-HHHHhccccccc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA---MGIAGT-EVAKEASDMVLA 219 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva---mg~~~~-~~~k~~ad~v~~ 219 (514)
+--.++++.++..++++++|||+.+|+.+.+.||+.+. -|.... +.....||+++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~ 204 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD 204 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC
Confidence 66788899999999999999999999999999996532 242222 232345777764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.5e-07 Score=86.80 Aligned_cols=126 Identities=15% Similarity=0.228 Sum_probs=89.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.++|+.|+++|++++++||.+...+..+.+..|+......+. .++ ..-..+..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~----~~d----------------~~~~~Kp~ 159 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWII----GGD----------------TLPQKKPD 159 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEE----ecC----------------CCCCCCCC
Confidence 4678999999999999999999999999999999988888854322110 000 00112445
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcH-HHHhcccccccCCCchhHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTE-VAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~-~~k~~ad~v~~~~~~~~i~~~i 230 (514)
|+--..+++.++..++++++|||+.||+.+.+.||+ +|+.|.+..+ ..+..+|+++. +...+.+++
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 555678888888889999999999999999999996 3444422222 33456788774 444454443
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.49 E-value=3e-07 Score=83.76 Aligned_cols=92 Identities=25% Similarity=0.420 Sum_probs=68.5
Q ss_pred hhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChh--
Q 010234 87 NEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPR-- 164 (514)
Q Consensus 87 ~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~-- 164 (514)
+++.+.|+.++++|++++|+||.+...+.++++.+|+.......... .... ......+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~---------------~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNG---------------GGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTT---------------CCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecc---------------cceeeeeECCCCC
Confidence 77779999999999999999999999999999999997532111000 0000 11223333333
Q ss_pred -hHHHHHHHH------hhCCCEEEEEcCCcCCHHhhh
Q 010234 165 -HKQEIVRLL------KEDGEVVAMTGDGVNDAPALK 194 (514)
Q Consensus 165 -~k~~iv~~l------~~~~~~v~~iGDg~ND~~ml~ 194 (514)
.|.+.++.+ +...+.++++|||.||++|+|
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 498999988 567899999999999999986
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.1e-06 Score=82.43 Aligned_cols=118 Identities=20% Similarity=0.259 Sum_probs=77.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceec--ccChHHHhhhhHHHHHHhhcCceEEEe-
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLK--SLTGKEFMEMHDKKAHLRQSGGLLFSR- 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~- 160 (514)
++.|++.++++.|+++|+++.++||.....+..+++.+|+.... +... ....+ ..+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~~~~~~~~~----------------g~~~g~~ 145 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFANQILFGDS----------------GEYAGFD 145 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEEeEEEEcCC----------------CcEECcc
Confidence 47899999999999999999999999999999999999985310 0000 00000 000000
Q ss_pred -----cChhhHHHHHHHHhhC--CCEEEEEcCCcCCHHhhhhcC--cceeeCCCC-cHHHHhccccccc
Q 010234 161 -----AEPRHKQEIVRLLKED--GEVVAMTGDGVNDAPALKLAD--IGIAMGIAG-TEVAKEASDMVLA 219 (514)
Q Consensus 161 -----~~p~~k~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~--igvamg~~~-~~~~k~~ad~v~~ 219 (514)
+....|.+.++.+... .+++++|||+.||+.|.+.++ ++++.|... .+.....+|+++.
T Consensus 146 ~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 146 ENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC
Confidence 0122355555555433 468999999999999988855 445555222 2334556888875
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.9e-07 Score=84.54 Aligned_cols=99 Identities=18% Similarity=0.234 Sum_probs=79.1
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.++|+.|+++|++++++|+........+.+.+|+......+. .++ ..-..+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~----~~~----------------~~~~~Kp~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALA----SAE----------------KLPYSKPH 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEE----Ecc----------------cCCCCCCC
Confidence 4688999999999999999999999999999999999999865433211 100 11123456
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
|+.-..+++.++..++++++|||+.||+++.+.||+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i 189 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSI 189 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEE
Confidence 667788889999899999999999999999999997643
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.7e-07 Score=82.76 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=74.1
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcc-cee---cccChHHHhhhhHHHHHHhhcCceE
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNED-ISL---KSLTGKEFMEMHDKKAHLRQSGGLL 157 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~i 157 (514)
..++.|++.+.|+.++++|++++++||.....+..+++.+|+...... +.. ...+|. ..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~-----------------~~ 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGN-----------------ID 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCC-----------------cc
Confidence 346899999999999999999999999999999999999998642111 000 000000 00
Q ss_pred EEecChhhHHHHHHHH----hhCCCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 158 FSRAEPRHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l----~~~~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
-..+..+.|.+.++.+ +...++++++||+.+|++|++.||.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 0112334555544433 334568999999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.3e-07 Score=80.56 Aligned_cols=111 Identities=20% Similarity=0.183 Sum_probs=76.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecc--cChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS--LTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
-++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+......+.... ..+.... ........-+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~--------~~~~~~~~~~~ 142 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRH--------IVWPHHCHGCC 142 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcE--------EEecCCCCccC
Confidence 4789999999999999999999999999999999999998854322221100 0000000 00000000011
Q ss_pred c--ChhhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCccee
Q 010234 161 A--EPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 161 ~--~p~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
. ....|.++++.++.. +++++++|||.||++|.+.||+-.|
T Consensus 143 ~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 143 SCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred cCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1 123588899998887 8999999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.7e-07 Score=83.59 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=86.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+......+ +.++ ..-..++.
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i----~~~~----------------~~~~~KP~ 153 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVL----IGGD----------------TLAERKPH 153 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEE----EecC----------------cCCCCCCC
Confidence 367899999999999999999999999998888888888885432211 1110 11123566
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc---eeeCCC-Cc-HHHHhccccccc
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---IAMGIA-GT-EVAKEASDMVLA 219 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig---vamg~~-~~-~~~k~~ad~v~~ 219 (514)
|+--.++++.++..++++++|||+.+|+.+.+.||+. |..|.. .. +.....+|+++.
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~ 215 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE 215 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC
Confidence 7777889999999999999999999999999999954 334422 11 232345788774
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.4e-06 Score=82.06 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=86.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++|+.....+....+.+|+......+ ..+++ . ...|
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~v----i~~~~-----------------~--~~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVV----QAGTP-----------------I--LSKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEE----EecCC-----------------C--CCCH
Confidence 57899999999999999999999999999999999999986533211 11110 0 0123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc---eeeCCCCcH-HHHhcccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---IAMGIAGTE-VAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig---vamg~~~~~-~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+.-..+++.++..++++++|||+.+|+.+.+.||+- |.-|.+..+ .....+|+++. +...+.+.+
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 444666777777889999999999999999999954 444533333 33445888774 445555443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.4e-06 Score=80.97 Aligned_cols=72 Identities=24% Similarity=0.275 Sum_probs=47.9
Q ss_pred cChhhHHHHHHHHhh----CCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHH----HHhccc----ccccCCCchhHHH
Q 010234 161 AEPRHKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEV----AKEASD----MVLADDDFSTIVS 228 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~----~k~~ad----~v~~~~~~~~i~~ 228 (514)
+...+|...++.+.. ..++|+++||+.||.+||..++.||.+||+..+. .....+ |....+.-.||++
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIle 240 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILE 240 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHH
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHH
Confidence 334567666665544 4678999999999999999999999999655551 222221 5666777889998
Q ss_pred HHHH
Q 010234 229 AVGE 232 (514)
Q Consensus 229 ~i~~ 232 (514)
.++|
T Consensus 241 gl~~ 244 (247)
T PF05116_consen 241 GLQH 244 (247)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8865
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-06 Score=78.98 Aligned_cols=99 Identities=23% Similarity=0.302 Sum_probs=67.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEE--Eec
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLF--SRA 161 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~ 161 (514)
++.|++.+.++.++++|++++++||.....+..+++.+|+...........-.| . + . .... ..+
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-~---~-------~---g~~~~~~~~ 138 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG-L---L-------T---GPIEGQVNP 138 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC-E---E-------e---CccCCcccC
Confidence 367999999999999999999999999999999999999853211100000000 0 0 0 0000 123
Q ss_pred ChhhHHHHHHHHhh----CCCEEEEEcCCcCCHHhhhhc
Q 010234 162 EPRHKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLA 196 (514)
Q Consensus 162 ~p~~k~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A 196 (514)
.+..|.++++.+.. ..++++++|||.||++|++.|
T Consensus 139 ~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 139 EGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 34667777766543 357899999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.7e-06 Score=82.66 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=78.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccC-ccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN-EDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.|++.+.|+.|+++|+++.++||.+...+..+.+.+|+.... ..+ +.++ ..-..++.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~i----i~~~----------------~~~~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYN----VTTD----------------DVPAGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceE----Eccc----------------cCCCCCCC
Confidence 57899999999999999999999999999999999999886532 111 1111 11123566
Q ss_pred hhhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCc---ceeeC
Q 010234 163 PRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADI---GIAMG 203 (514)
Q Consensus 163 p~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~i---gvamg 203 (514)
|+--...++.++.. ++++++|||+.+|+.+-+.||+ +|..|
T Consensus 159 p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 159 PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecC
Confidence 77778888899874 8899999999999999999994 45445
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.5e-06 Score=81.44 Aligned_cols=117 Identities=13% Similarity=0.081 Sum_probs=86.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++|+.|+++|+++.++|+.+...+..+.+.+|+......+ ++++ ..-..++.|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~i----i~~~----------------d~~~~KP~P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVV----LAAE----------------DVYRGKPDP 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEE----Eecc----------------cCCCCCCCH
Confidence 57899999999999999999999999999999999999986543322 1111 111235667
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce-eeCCCCcHHHHhcccccccC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI-AMGIAGTEVAKEASDMVLAD 220 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv-amg~~~~~~~k~~ad~v~~~ 220 (514)
+--...++.++...+++++|||+.+|+.+-+.||+.+ ++...........+|+++.+
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 7778899999999999999999999999999999632 22212222223346776543
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.26 E-value=9.2e-06 Score=76.99 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=86.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-+++||+.+.++.|+++|+++.++||.....+..+.+++|+...+..+....+.-. .+...-....
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~--------------~dGvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFD--------------EDGVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEEC--------------CCCeEeCCCC
Confidence 46899999999999999999999999999999999999998654433321111100 0011111111
Q ss_pred h----hhHHH-----HHHHHh--hCCCEEEEEcCCcCCHHhhhhcC-----cceeeCCCCcH----HHHhcccccccCCC
Q 010234 163 P----RHKQE-----IVRLLK--EDGEVVAMTGDGVNDAPALKLAD-----IGIAMGIAGTE----VAKEASDMVLADDD 222 (514)
Q Consensus 163 p----~~k~~-----iv~~l~--~~~~~v~~iGDg~ND~~ml~~A~-----igvamg~~~~~----~~k~~ad~v~~~~~ 222 (514)
| ..|.+ ..+.++ ...++++++|||.||++|..-.. +.|..=|...+ .-+++-|+|+.++.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 2 23333 334455 56788999999999999966551 22222233333 34667799998776
Q ss_pred chhHHHHH
Q 010234 223 FSTIVSAV 230 (514)
Q Consensus 223 ~~~i~~~i 230 (514)
--.++..|
T Consensus 266 t~~v~~~i 273 (277)
T TIGR01544 266 TLEVANSI 273 (277)
T ss_pred CchHHHHH
Confidence 66666554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.3e-06 Score=80.51 Aligned_cols=101 Identities=18% Similarity=0.148 Sum_probs=76.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++|+.|+++|+++.++||.....+..+.+..|+...... ..+.++ ..-..++.|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d---~i~~~~----------------~~~~~KP~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPD---HVVTTD----------------DVPAGRPYP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCce---EEEcCC----------------cCCCCCCCh
Confidence 5789999999999999999999999999998888888776542111 011111 111234566
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCc---ceeeC
Q 010234 164 RHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADI---GIAMG 203 (514)
Q Consensus 164 ~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~i---gvamg 203 (514)
+--..+++.++.. .+++++|||+.+|+.+-+.||+ ||..|
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 7778888888875 5899999999999999999995 56555
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.2e-05 Score=88.54 Aligned_cols=141 Identities=18% Similarity=0.266 Sum_probs=87.3
Q ss_pred CCChhHHHHHHHHHH-cCCcEEEECCCChHHHHHHHHHcCC--cccCccce--------ecccChHHHhh----hhH---
Q 010234 84 PPRNEVHQAIEDCRA-AGIRVMVITGDNKNTAEAICREIGV--FECNEDIS--------LKSLTGKEFME----MHD--- 145 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~-~Gi~v~i~TG~~~~~a~~ia~~~gi--~~~~~~~~--------~~~~~~~~~~~----~~~--- 145 (514)
.+.+++.++|++|.+ .|+.|+++|||+...........++ ...++... ........+.. +.+
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 478999999999999 5999999999999999888765553 22221110 00000100000 000
Q ss_pred -------------------------------H--HHHHhh-----------cCceEEEecChhhHHHHHHHHhh--CCCE
Q 010234 146 -------------------------------K--KAHLRQ-----------SGGLLFSRAEPRHKQEIVRLLKE--DGEV 179 (514)
Q Consensus 146 -------------------------------~--~~~~~~-----------~~~~i~~~~~p~~k~~iv~~l~~--~~~~ 179 (514)
. ...+.. .+..+-.++...+|...++.+.+ ..+.
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 0 000000 01112233344577777766654 3578
Q ss_pred EEEEcCCcCCHHhhhhc---CcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 180 VAMTGDGVNDAPALKLA---DIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 180 v~~iGDg~ND~~ml~~A---~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
++++||+.||.+||+.+ +++|+||+ + +.+|++.+.++ +++..+++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGP-G----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECC-C----CCcceEeCCCH--HHHHHHHH
Confidence 99999999999999996 69999994 3 45688888754 45666664
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.5e-06 Score=75.84 Aligned_cols=106 Identities=14% Similarity=0.108 Sum_probs=74.2
Q ss_pred CCChhHHHHH-HHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAI-EDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I-~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.+.|++.+.| +.+++.|++++++|+.+...+..+++.+|+.... .+....+.. .......-..+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i~t~l~~-------------~~tg~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLIASQMQR-------------RYGGWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceEEEEEEE-------------EEccEECCccCC
Confidence 4589999999 5688899999999999999999999999862211 111111100 000011122355
Q ss_pred hhhHHHHHHH-HhhCCCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 163 PRHKQEIVRL-LKEDGEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 163 p~~k~~iv~~-l~~~~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
.+.|..-++. ++...+...+-||+.||.|||+.|+.+++++
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 5777665554 4656667789999999999999999999985
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.1e-06 Score=77.02 Aligned_cols=98 Identities=23% Similarity=0.287 Sum_probs=77.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCc--ccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF--ECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
.++.||+.+.++.|+++|+++.++||.....+....+.+|+. .....+ +...+ .-..+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i----~~~~~----------------~~~~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAV----VCPSD----------------VAAGR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEE----EcCCc----------------CCCCC
Confidence 368999999999999999999999999999999999999986 322221 11111 01124
Q ss_pred cChhhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCcce
Q 010234 161 AEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
+.|+--..+++.++.. ++++++|||+.+|+.+-+.||+.+
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 5667778888888876 689999999999999999999886
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=98.16 E-value=1e-05 Score=74.68 Aligned_cols=106 Identities=14% Similarity=0.120 Sum_probs=73.2
Q ss_pred CCChhHHHHHH-HHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIE-DCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~-~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.+.|++.+.|+ .++++|++++++|+.+...++.+++..++......+ ...+... ......-..+.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i-~t~le~~-------------~gg~~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLI-ASQIERG-------------NGGWVLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEE-EEEeEEe-------------CCceEcCccCC
Confidence 57899999996 788899999999999999999999886653311111 1100000 00011222345
Q ss_pred hhhHHHHHH-HHhhCCCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 163 PRHKQEIVR-LLKEDGEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 163 p~~k~~iv~-~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
.+.|.+-++ .++...+...+-||+.||.|||+.||.++++.
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 567766555 44545556789999999999999999999984
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=7.9e-06 Score=76.16 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=82.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++|+.|+++|+++.++|+.+...+....+..|+... .. .+++++ .-..++.|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~----i~~~~~----------------~~~~KP~p 141 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EV----FVTAER----------------VKRGKPEP 141 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cE----EEEHHH----------------hcCCCCCc
Confidence 5789999999999999999999999988777777777776321 11 111111 11235667
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeCCCCcHHHHhcccccccC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMGIAGTEVAKEASDMVLAD 220 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg~~~~~~~k~~ad~v~~~ 220 (514)
+--...++.++..++++++|||+.+|+.+-+.||+. |++...........+|+++.+
T Consensus 142 ~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 142 DAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 777888899999999999999999999999999974 445422222223346666544
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.2e-05 Score=79.82 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=85.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.||+.+.++.|+++|+++.++|+.+...+..+.+.+|+......+. .++ .....+..|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv----~sd----------------dv~~~KP~P 275 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIV----AAE----------------DVYRGKPDP 275 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEE----ecC----------------cCCCCCCCH
Confidence 578999999999999999999999999999999999999865433221 111 111234566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeCCCCcHHHHhcccccccC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMGIAGTEVAKEASDMVLAD 220 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg~~~~~~~k~~ad~v~~~ 220 (514)
+--...++.++..++++++|||+.+|+.+-+.||+- |++...........||+++.+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC
Confidence 777888999999999999999999999999999964 223311112212347777643
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.09 E-value=9.5e-06 Score=78.72 Aligned_cols=120 Identities=20% Similarity=0.210 Sum_probs=82.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|+++.++|+.+......+.+..+......... .+.+++ .-..++.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~--~v~~~~----------------~~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLD--VFAGDD----------------VPKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceE--EEeccc----------------cCCCCCCH
Confidence 578999999999999999999999999888888777653221111100 011111 11235566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCC---cHHHHhcccccccCCC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAG---TEVAKEASDMVLADDD 222 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~---~~~~k~~ad~v~~~~~ 222 (514)
+--..+++.++..++++++|||+.+|+.+-+.||+.+..-..+ .+. ...+|+++.+..
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~-l~~ad~vi~~~~ 266 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADED-FSGADAVFDCLG 266 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccc-cCCCcEEECChh
Confidence 7778899999999999999999999999999999654322122 222 234777765433
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.5e-05 Score=71.96 Aligned_cols=99 Identities=22% Similarity=0.191 Sum_probs=66.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCCh---------------HHHHHHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNK---------------NTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
.+.|++.+++++|+++|+++.++|+.+. .......+..|+.. ..+......+.
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f--~~i~~~~~~~~---------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL--DGIYYCPHHPE---------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc--ceEEECCCCCC----------
Confidence 3679999999999999999999998763 11222334444410 00000000000
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
+..-..++.|+--..+++.++...+++++|||+.+|+.+-+.||+.
T Consensus 97 -----~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 97 -----DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred -----CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 0112235567777888999999999999999999999999999964
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.1e-05 Score=68.75 Aligned_cols=93 Identities=22% Similarity=0.235 Sum_probs=72.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCC--------hHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCc
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDN--------KNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGG 155 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (514)
++.|++.++++.|+++|++++++|+.. ...+..+.+.+|+..... ...+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~------------------ 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL-----YACP------------------ 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE-----EECC------------------
Confidence 578999999999999999999999998 777888888888742110 0000
Q ss_pred eEEEecChhhHHHHHHHH-hhCCCEEEEEcC-CcCCHHhhhhcCcce
Q 010234 156 LLFSRAEPRHKQEIVRLL-KEDGEVVAMTGD-GVNDAPALKLADIGI 200 (514)
Q Consensus 156 ~i~~~~~p~~k~~iv~~l-~~~~~~v~~iGD-g~ND~~ml~~A~igv 200 (514)
-..++.|+.-..+++.+ +..++++++||| ..+|+.+.+.+|+-.
T Consensus 82 -~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 -HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred -CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 01244566667888888 488999999999 699999999999643
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.3e-05 Score=73.40 Aligned_cols=93 Identities=17% Similarity=0.072 Sum_probs=72.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
+++.++..++++.|+++|+++.++||.+...+..+.+.+|+......+. ..+ .... ++.
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~----~~~----------------~~~~-KP~ 163 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQI----WME----------------DCPP-KPN 163 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEE----eec----------------CCCC-CcC
Confidence 3456667999999999999999999999999999999999865332211 100 1111 566
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhc
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 196 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A 196 (514)
|+....+++.++..++++++|||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 7777888899999999999999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.8e-05 Score=72.53 Aligned_cols=98 Identities=14% Similarity=0.226 Sum_probs=76.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+++++|+++|++++++|+.+...+....+.+|+......+ +..++ .-..++.|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i----~~s~~----------------~~~~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAV----LSADA----------------VRAYKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhhee----Eehhh----------------cCCCCCCH
Confidence 57899999999999999999999999999999999999985432221 11111 01124456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
+--..+++.++..++++++|||+.+|+.+-+.+|+...
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 66688888999999999999999999999999997643
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.3e-05 Score=74.77 Aligned_cols=96 Identities=18% Similarity=0.180 Sum_probs=76.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++|+.|+++|++++++|+.+...+....+.+|+......+. .++ ..-..++.|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~----~~~----------------~~~~~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVI----TSE----------------EEGVEKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEE----Eec----------------cCCCCCCCH
Confidence 678999999999999999999999999888888889999865332211 000 011234566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG 199 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~ig 199 (514)
+--..+++.++..++++++|||+. +|+.+-+.||+-
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 667888899998899999999998 999999999963
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.4e-05 Score=78.42 Aligned_cols=106 Identities=18% Similarity=0.218 Sum_probs=77.8
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcc-cCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFE-CNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
.+++.+++.++|++|+++|++++++||++...+..+.+.+|+.. ....+. +.+ .....++... -.+
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~-----~~~-----~~~~~~~~~~---~~k 251 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLI-----GRP-----PDMHFQREQG---DKR 251 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhh-----CCc-----chhhhcccCC---CCC
Confidence 56789999999999999999999999999999999999998854 211110 000 0000010100 125
Q ss_pred cChhhHHHHHHHHhh-CCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 161 AEPRHKQEIVRLLKE-DGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~-~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
..|+-+.+.++.+.. ..+++++|||+.+|+.+-+.||+.+
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 667788888888766 5689999999999999999999754
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.8e-05 Score=71.67 Aligned_cols=85 Identities=19% Similarity=0.294 Sum_probs=61.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCC----hHHHHHHHHHcCC--cccCccceecccChHHHhhhhHHHHHHhhcCce
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDN----KNTAEAICREIGV--FECNEDISLKSLTGKEFMEMHDKKAHLRQSGGL 156 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~----~~~a~~ia~~~gi--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (514)
-.+.+++++.++.++++|+++.++|||+ ..++..+.+.+|+ ..... .
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~---------------------------v 165 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNP---------------------------V 165 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccccee---------------------------E
Confidence 3577889999999999999999999985 5588888888998 33111 1
Q ss_pred EEEecC--hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc
Q 010234 157 LFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI 198 (514)
Q Consensus 157 i~~~~~--p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i 198 (514)
++...+ ..+|...++. ...++++||+.+|+.+.+.||+
T Consensus 166 il~gd~~~K~~K~~~l~~----~~i~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 166 IFAGDKPGQYTKTQWLKK----KNIRIFYGDSDNDITAAREAGA 205 (237)
T ss_pred EEcCCCCCCCCHHHHHHh----cCCeEEEcCCHHHHHHHHHcCC
Confidence 111111 1344444443 2348999999999999999995
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.9e-05 Score=73.80 Aligned_cols=98 Identities=13% Similarity=0.101 Sum_probs=76.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.+.++.|+++|+++.++|+.+...+....+..|+......+. .++ ..-..++.
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv----~s~----------------~~~~~KP~ 151 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLL----STH----------------TFGYPKED 151 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEE----Eee----------------eCCCCCCC
Confidence 4678999999999999999999999999888888888888855332211 000 00112445
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
|+--..+++.++..++++++|||+.+|+.+-+.||+..
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 66668888899999999999999999999999999863
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.8e-05 Score=69.52 Aligned_cols=96 Identities=13% Similarity=0.026 Sum_probs=67.7
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChH--------HHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCce
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKN--------TAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGL 156 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (514)
+.|++.+++++|+++|+++.++|+.+.. ......+..|+...... ....++ ..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~~~~~~----------------~~ 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC---PHKHGD----------------GC 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC---cCCCCC----------------CC
Confidence 6799999999999999999999997631 22333444555321000 000000 11
Q ss_pred EEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 157 LFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 157 i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
-..++.|+--.++++.++...+++++|||+.+|+.+-+.||+-
T Consensus 90 ~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 90 ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 2245667777889999998899999999999999999999964
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=97.93 E-value=2e-05 Score=71.22 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=72.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.++++.|+++|+++.++|+. ..+..+.+.+|+......+. ...+ .-..++.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~----~~~~----------------~~~~kp~ 144 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIV----DADE----------------VKEGKPH 144 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEee----ehhh----------------CCCCCCC
Confidence 468999999999999999999999998 66788888888864332211 1000 0112344
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
|+--..+++.++..++++++|||+.+|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 55557778888888899999999999999999999753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.2e-05 Score=72.20 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=63.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCC----ChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEE
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGD----NKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFS 159 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (514)
.+.+++.+.++.++++|+++.++|+| ...++..+.+.+|+...... .+.++. ..
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~----i~~~d~----------------~~-- 171 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPV----IFAGDK----------------PG-- 171 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeE----EECCCC----------------CC--
Confidence 35556999999999999999999999 66789999999999642211 111110 00
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCC
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIA 205 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~ 205 (514)
...| ++...++. ...++++||+.||+.+-+.||+ ++..|.+
T Consensus 172 ~~Kp-~~~~~l~~----~~i~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 172 QYQY-TKTQWIQD----KNIRIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred CCCC-CHHHHHHh----CCCeEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 0112 23333322 2347999999999999999994 5555533
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.90 E-value=2.5e-05 Score=78.89 Aligned_cols=96 Identities=16% Similarity=0.146 Sum_probs=75.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHH-HcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICR-EIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.|++.+.++.|+++|+++.++|+.....+....+ ..|+......+ +.++ .+-..++.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~i----i~~d----------------~v~~~KP~ 152 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVI----VGGD----------------EVEKGKPS 152 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEE----Eehh----------------hcCCCCCC
Confidence 578999999999999999999999999888887765 57775432221 1111 11123556
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
|+--.++++.++..++++++|||+.+|+.+-+.||+.
T Consensus 153 p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 153 PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 7777888999999999999999999999999999965
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.89 E-value=5.8e-05 Score=66.95 Aligned_cols=114 Identities=8% Similarity=0.045 Sum_probs=75.0
Q ss_pred CcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCC-ChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHH
Q 010234 72 GLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGD-NKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHL 150 (514)
Q Consensus 72 ~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (514)
+.+.....+-+-++.|++.++++.|+++|+++.++|+. ....+..+.+.+|+..........
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~----------------- 95 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMH----------------- 95 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHH-----------------
Confidence 34455555566678999999999999999999999987 888889999999985211100000
Q ss_pred hhcCceEEEecC--hhhHHHHHHHHh------hCCCEEEEEcCCcCCHHhhhhcCcceee
Q 010234 151 RQSGGLLFSRAE--PRHKQEIVRLLK------EDGEVVAMTGDGVNDAPALKLADIGIAM 202 (514)
Q Consensus 151 ~~~~~~i~~~~~--p~~k~~iv~~l~------~~~~~v~~iGDg~ND~~ml~~A~igvam 202 (514)
...+..+..... +..-..+.+.++ ..++++++|||+..|+.+-++||+-++.
T Consensus 96 ~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 96 SLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred HhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 000011111111 111123344443 5678999999999999999999975543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.88 E-value=2.5e-05 Score=70.69 Aligned_cols=94 Identities=13% Similarity=0.180 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++|+.|+++|+++.++|+... +....+.+|+......+ +.+.+ .-..++.|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~----~~~~~----------------~~~~kp~p 144 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAI----VDPAE----------------IKKGKPDP 144 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEE----Eehhh----------------cCCCCCCh
Confidence 6789999999999999999999998643 45667778875432221 11111 11235566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
+--..+++.++...+++++|||+.+|+.+-+.+|+.
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 667888888888889999999999999999999974
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.2e-05 Score=78.92 Aligned_cols=123 Identities=14% Similarity=0.142 Sum_probs=82.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.|+.|+++|+++.++|+.....+..+.+.+|+......+ +++++ +-....|
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i----~~~d~-----------------v~~~~kP 388 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTET----FSIEQ-----------------INSLNKS 388 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhccee----EecCC-----------------CCCCCCc
Confidence 67899999999999999999999999999999999999986533221 11110 0012334
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eee--CCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAM--GIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vam--g~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
+.-...++.+ ..+++++|||+.+|+.+-+.||+. |++ |....+. ...+|+++. +...+.+.+.+
T Consensus 389 ~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~-~~~~d~~i~--~l~el~~~l~~ 455 (459)
T PRK06698 389 DLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDE-LAQADIVID--DLLELKGILST 455 (459)
T ss_pred HHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccc-cCCCCEEeC--CHHHHHHHHHH
Confidence 4444444444 357899999999999999999963 333 3111222 235777764 44555555533
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.7e-05 Score=68.30 Aligned_cols=105 Identities=15% Similarity=0.053 Sum_probs=66.0
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChH---------------HHHHHHHHcCCcccCccceecccChHHHhhhhHHHHH
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKN---------------TAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAH 149 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (514)
+.|++.++|++|+++|++++++|+.+.. ....+....++.- ..+........+..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~~~~~~~~~-------- 96 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL--DGIYYCPHHPEGVE-------- 96 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc--cEEEECCCCCcccc--------
Confidence 5799999999999999999999987741 1112233333321 00000000000000
Q ss_pred HhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 150 LRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 150 ~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
...+..-..++.|+--..+++.++...+++++|||+.+|+.+-+.||+..
T Consensus 97 -~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 97 -EFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred -cccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcE
Confidence 00001112355667778888889989999999999999999999999753
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.6e-05 Score=71.19 Aligned_cols=66 Identities=20% Similarity=0.305 Sum_probs=44.7
Q ss_pred ecChhhHHHHHH----HHhhCCCEEEEEcCCcCCHHhhhhc--------CcceeeCCCCcHHHHhcccccccCCCchhHH
Q 010234 160 RAEPRHKQEIVR----LLKEDGEVVAMTGDGVNDAPALKLA--------DIGIAMGIAGTEVAKEASDMVLADDDFSTIV 227 (514)
Q Consensus 160 ~~~p~~k~~iv~----~l~~~~~~v~~iGDg~ND~~ml~~A--------~igvamg~~~~~~~k~~ad~v~~~~~~~~i~ 227 (514)
+..+.+|...++ .++.....++++||+.||.+|++.+ +++|+|+ .+ ..+..|++++. +.+.+.
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v~ 236 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQVL 236 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHHH
Confidence 344455644444 4444567899999999999999999 5888885 22 23566888886 444455
Q ss_pred HHH
Q 010234 228 SAV 230 (514)
Q Consensus 228 ~~i 230 (514)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.85 E-value=2.6e-05 Score=69.47 Aligned_cols=99 Identities=19% Similarity=0.311 Sum_probs=77.7
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
..++.|++.+.+++|+++|++++++|+.+........+.+|+......+.. .++ .-..++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~----~~~----------------~~~~Kp 134 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIIS----SDD----------------VGSRKP 134 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEE----GGG----------------SSSSTT
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccc----cch----------------hhhhhh
Confidence 346889999999999999999999999999999999999998743322211 110 001234
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
.|+--..+++.++..++++++|||+..|+.+-+.||+..
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 456668888999999999999999999999999999753
|
... |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.7e-05 Score=68.07 Aligned_cols=95 Identities=17% Similarity=0.225 Sum_probs=72.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|++++++|+..... ..+..++|+......+.. +. ..-..+++|
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~----~~----------------~~~~~KP~~ 143 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIF----SG----------------DVGRGKPDP 143 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEE----cC----------------CCCCCCCCH
Confidence 678999999999999999999999998887 666666888543322110 00 111234556
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
+--..+++.++..++++++|||+..|+.+-+.+|+-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 144 DIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 667888888888999999999999999999999974
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.2e-05 Score=68.04 Aligned_cols=100 Identities=15% Similarity=0.141 Sum_probs=70.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCC---------------hHHHHHHHHHcCCcccCccceec-ccChHHHhhhhHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDN---------------KNTAEAICREIGVFECNEDISLK-SLTGKEFMEMHDKK 147 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~---------------~~~a~~ia~~~gi~~~~~~~~~~-~~~~~~~~~~~~~~ 147 (514)
++-|++.++|++|+++|++++++|... ...+..+.+.+|+. ...+... ....+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~--------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDD--------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCC---------
Confidence 467999999999999999999999863 44566677777774 1111000 00000
Q ss_pred HHHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 148 AHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 148 ~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
..-..++.|+--..+++.++...+++++|||+.+|+.+.+.+|+...
T Consensus 98 -------~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 -------NCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 11122445566677788888888999999999999999999997644
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.79 E-value=4.8e-05 Score=66.03 Aligned_cols=101 Identities=21% Similarity=0.209 Sum_probs=70.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCCh---------------HHHHHHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNK---------------NTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
++.|++.++++.|+++|++++++|+.+. ..+....+.+|+.... . +.......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~-~~~~~~~~---------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-V-LFCPHHPA---------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-E-EECCCCCC----------
Confidence 4689999999999999999999999763 4555666777774210 0 00000000
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
+..-..++.|+--..+++.++...+++++|||+..|+.+-+.+|+-..
T Consensus 95 -----~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 95 -----DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 000112455666688888888888999999999999999999997543
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00026 Score=67.01 Aligned_cols=43 Identities=23% Similarity=0.342 Sum_probs=35.7
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CcCCHHhhhh-cCcceeeCCCCcH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGD----GVNDAPALKL-ADIGIAMGIAGTE 208 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~-A~igvamg~~~~~ 208 (514)
.+|...++.++ ..++|++||| +.||++||+. .-.++++. +..+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~-~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT-SPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC-CHHH
Confidence 57888899998 8999999999 8999999997 44688885 4433
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.77 E-value=6.1e-05 Score=67.10 Aligned_cols=87 Identities=16% Similarity=0.181 Sum_probs=69.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCC-hHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDN-KNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.+.|++.++++.|++.|++++++|+.+ ...+..+.+.+|+.... -..++.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~-----------------------------~~~KP~ 93 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP-----------------------------HAVKPP 93 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc-----------------------------CCCCCC
Confidence 568999999999999999999999998 57777777777763210 012455
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcc
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG 199 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~ig 199 (514)
|+--..+++.++..++++++|||+. .|+.+-+.+|+-
T Consensus 94 p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 94 GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 6666778888888889999999998 799999999963
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=97.75 E-value=6.9e-05 Score=68.93 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=70.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|++++++|+.... .....+.+|+......+.. .. ..-..+++|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~----s~----------------~~~~~KP~~ 163 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVT----SY----------------EVGAEKPDP 163 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEe----ec----------------ccCCCCCCH
Confidence 57899999999999999999999987654 4667777887543222110 00 011124556
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG 199 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~ig 199 (514)
+--..+++.++..++++++|||+. +|+.+-+.||+-
T Consensus 164 ~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 164 KIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 666788888998999999999997 899999999864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0001 Score=68.70 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=67.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHH-HHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEA-ICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.++.|++.++|+.|+++|+++.++||........ ..+..++......+ +++++. ..-..++
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i----~~~~~~--------------~~~~~KP 138 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHV----VTGDDP--------------EVKQGKP 138 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEE----EECChh--------------hccCCCC
Confidence 4578999999999999999999999987654432 22222332211111 111100 0112245
Q ss_pred ChhhHHHHHHHHh---hCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 162 EPRHKQEIVRLLK---EDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 162 ~p~~k~~iv~~l~---~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
.|+--...++.++ ...+++++|||+..|+.+-+.||+.
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 6667788888886 7789999999999999999999964
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00011 Score=67.97 Aligned_cols=99 Identities=14% Similarity=0.113 Sum_probs=75.3
Q ss_pred ccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc---CCcccCccceecccChHHHhhhhHHHHHHhhcCceE
Q 010234 81 LRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI---GVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL 157 (514)
Q Consensus 81 ~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 157 (514)
.+.++.|++.+++++|+++|+++.++|..+......+.+.. ++........ +..+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~f----------------------d~~~ 149 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYF----------------------DTTV 149 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEE----------------------EeCc
Confidence 34568999999999999999999999999888777776654 2322111100 0112
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 158 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
..+..|+--..+++.++..+++++++||+..|+.+-+.||+-..
T Consensus 150 g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 150 GLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred ccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 34567777789999999999999999999999999999997543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00026 Score=62.02 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=64.7
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHH---HHHHHc---CCcccCccceecccChHHHhhhhHHHHHHhhcCc
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAE---AICREI---GVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGG 155 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~---~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (514)
++.+.|++.+++++++++|++++++|||+...+. .+.+++ |..-+...+ ..-.+...... . .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l--i~~~g~~~~~~---------~-~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV--LLSPDRLFAAL---------H-R 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE--EEcCCcchhhh---------h-c
Confidence 4678999999999999999999999999988874 555552 211111111 11111111000 0 0
Q ss_pred eEEEecChhhHHHHHHHHhh-----CCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 156 LLFSRAEPRHKQEIVRLLKE-----DGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 156 ~i~~~~~p~~k~~iv~~l~~-----~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
.+..+...+.|.+.++.+.. ...-++++||+.+|+.+.+++|+.
T Consensus 93 e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11112222336666665554 335567799999999999998865
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00037 Score=62.11 Aligned_cols=38 Identities=13% Similarity=0.298 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCc
Q 010234 87 NEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124 (514)
Q Consensus 87 ~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~ 124 (514)
+.+...+.+|+++|++|+.+|.........+-+.+|+.
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 45678999999999999999999999999999999875
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00031 Score=60.74 Aligned_cols=109 Identities=18% Similarity=0.238 Sum_probs=75.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
+++|+-++.++.+++++++++++|+........+.+.++=...-.++ ..++..... +.......++...++
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~i--di~sn~~~i-------h~dg~h~i~~~~ds~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCI--DIVSNNDYI-------HIDGQHSIKYTDDSQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeee--EEeecCceE-------cCCCceeeecCCccc
Confidence 68999999999999999999999999999999999887611100000 000000000 000000122222222
Q ss_pred --hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 164 --RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 164 --~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
.+|...++.+.++.+.+.++|||..|+++-+.+++-.|
T Consensus 144 fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 144 FGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 57889999999999999999999999999999988775
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00037 Score=66.03 Aligned_cols=47 Identities=13% Similarity=0.237 Sum_probs=40.3
Q ss_pred EEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH---cCC
Q 010234 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE---IGV 123 (514)
Q Consensus 77 G~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~---~gi 123 (514)
|++.-.+++-|++.++|++|+++|++++++||++..+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 66666678899999999999999999999999998887777766 466
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00018 Score=81.86 Aligned_cols=135 Identities=11% Similarity=0.166 Sum_probs=97.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCc-ccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF-ECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.+.|++.+.++.|+++|+++.++|+.....+....+.+|+. .....+ +..+ ..-..++.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~i----v~~~----------------~~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAI----VSAD----------------AFENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEE----EECc----------------ccccCCCC
Confidence 36799999999999999999999999999999999999985 222211 1111 11123456
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYN 238 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~ 238 (514)
|+--.++++.++..++++++|||+.+|+.+-+.||+ +|.-+....+.....+|+++.+...-.+.+++..|-....
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~ 299 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATP 299 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCC
Confidence 677788899999999999999999999999999995 4433322233444567888877766666666655544443
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00015 Score=63.37 Aligned_cols=93 Identities=16% Similarity=0.174 Sum_probs=69.2
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
+....+++.+.++.|+++|+++.++|+.....+....+.. +......+. ..+ . ...++
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~----~~~----------------~-~~~Kp 119 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLIL----GSD----------------E-FGAKP 119 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEE----ecC----------------C-CCCCc
Confidence 3345689999999999999999999999999988887775 432211110 000 1 11345
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcC
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 197 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 197 (514)
.|+--..+++.++..+ ++++|||+.+|+.+-+.||
T Consensus 120 ~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 6666788888888888 9999999999999988875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0006 Score=64.82 Aligned_cols=49 Identities=8% Similarity=0.116 Sum_probs=40.7
Q ss_pred EEecccCCCChhHHHHHHHHHHcCCcEEEECC---CChHHHHHHHHHcCCcc
Q 010234 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITG---DNKNTAEAICREIGVFE 125 (514)
Q Consensus 77 G~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG---~~~~~a~~ia~~~gi~~ 125 (514)
|++.-.+++-|++.++|++|+++|++++++|| |+........+++|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44555566677999999999999999999996 88888888888898843
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00019 Score=67.07 Aligned_cols=95 Identities=18% Similarity=0.213 Sum_probs=74.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+++++|+++ ++++++|+.....+....+.+|+......+... . ..-..+++|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~----~----------------~~~~~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVS----E----------------DAGIQKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEc----C----------------ccCCCCCCH
Confidence 5789999999999999 999999999999999999999986533222110 0 011124556
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCc-CCHHhhhhcCcc
Q 010234 164 RHKQEIVRLL-KEDGEVVAMTGDGV-NDAPALKLADIG 199 (514)
Q Consensus 164 ~~k~~iv~~l-~~~~~~v~~iGDg~-ND~~ml~~A~ig 199 (514)
+--..+++.+ +..++++++|||+. +|+.+-+.+|+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 6667888888 88889999999998 899999999964
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00044 Score=76.51 Aligned_cols=38 Identities=11% Similarity=0.216 Sum_probs=33.5
Q ss_pred CCCChhHHHHHHHH-HHcCCcEEEECCCChHHHHHHHHH
Q 010234 83 DPPRNEVHQAIEDC-RAAGIRVMVITGDNKNTAEAICRE 120 (514)
Q Consensus 83 ~~l~~~~~~~I~~l-~~~Gi~v~i~TG~~~~~a~~ia~~ 120 (514)
..+.+++.+++++| ++.|+.|+++|||...........
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 36778999999997 778999999999999999988754
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00018 Score=60.71 Aligned_cols=88 Identities=9% Similarity=0.108 Sum_probs=64.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCC-ChHHHHHHHHHcC-------CcccCccceecccChHHHhhhhHHHHHHhhcCc
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGD-NKNTAEAICREIG-------VFECNEDISLKSLTGKEFMEMHDKKAHLRQSGG 155 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~-~~~~a~~ia~~~g-------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (514)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+ +......+ .. ..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~----~~----------------~~- 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPL----TI----------------GY- 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhh----hh----------------cC-
Confidence 68899999999999999999999999 7777777777766 21111000 00 00
Q ss_pred eEEEecChhhHHHHHHHHh--hCCCEEEEEcCCcCCHHhhhh
Q 010234 156 LLFSRAEPRHKQEIVRLLK--EDGEVVAMTGDGVNDAPALKL 195 (514)
Q Consensus 156 ~i~~~~~p~~k~~iv~~l~--~~~~~v~~iGDg~ND~~ml~~ 195 (514)
....|+.-..+++.++ ..++++++|||+..|+..++.
T Consensus 88 ---~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 88 ---WLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ---CCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 0134556678888899 889999999999999876653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00031 Score=65.66 Aligned_cols=96 Identities=13% Similarity=0.134 Sum_probs=72.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+ +|+++.++|+.....+....+.+|+......+.. .. ..-..+++|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~----~~----------------~~~~~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVI----SE----------------QVGVAKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEE----EC----------------ccCCCCCCH
Confidence 57899999999999 6899999999998888888888888643322110 00 011124556
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCc-CCHHhhhhcCcce
Q 010234 164 RHKQEIVRLLKED-GEVVAMTGDGV-NDAPALKLADIGI 200 (514)
Q Consensus 164 ~~k~~iv~~l~~~-~~~v~~iGDg~-ND~~ml~~A~igv 200 (514)
+--..+++.++.. .+++++|||+. +|+.+-+.||+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDT 192 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcE
Confidence 6667888888864 47899999998 7999999999753
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00022 Score=63.12 Aligned_cols=94 Identities=13% Similarity=0.115 Sum_probs=67.7
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChH------------HHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKN------------TAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQ 152 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (514)
+-|++.++|++|+++|+++.++|..+.. .+..+.+.+|+.. ..+ ...+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~i---i~~~~-------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVL---AATHA-------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEE---EecCC--------------
Confidence 3599999999999999999999986642 4566778888742 110 00000
Q ss_pred cCceEEEecChhhHHHHHHHHh--hCCCEEEEEcCCc--------CCHHhhhhcCcce
Q 010234 153 SGGLLFSRAEPRHKQEIVRLLK--EDGEVVAMTGDGV--------NDAPALKLADIGI 200 (514)
Q Consensus 153 ~~~~i~~~~~p~~k~~iv~~l~--~~~~~v~~iGDg~--------ND~~ml~~A~igv 200 (514)
.....+.|+--..+++.++ ...+++++|||.. +|+.+-+.||+-.
T Consensus 104 ---~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 ---GLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0112344556677888887 7789999999986 6999999998765
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00074 Score=64.50 Aligned_cols=48 Identities=19% Similarity=0.306 Sum_probs=37.5
Q ss_pred EEecccCC----CChhHHHHHHHHHHcCCcEEEECCCChHH---HHHHHHHcCCc
Q 010234 77 GLVGLRDP----PRNEVHQAIEDCRAAGIRVMVITGDNKNT---AEAICREIGVF 124 (514)
Q Consensus 77 G~~~~~~~----l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~---a~~ia~~~gi~ 124 (514)
|++.-.++ +-|++.++|++|+++|++++++||++..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 88999999999999999999999987665 45555667763
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00014 Score=63.09 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=68.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
+++|++.+.++.|+ +++++.++|+.+...+..+.+.+++.... ....+.+++. .+..|
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~---f~~i~~~~d~------------------~~~KP 102 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF---GYRRLFRDEC------------------VFVKG 102 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE---eeeEEECccc------------------cccCC
Confidence 57999999999998 67999999999999999999998874311 0011111110 01112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
. -.+.++.++..++++++|||+.+|+.+-+.+++-|.
T Consensus 103 ~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 344567778889999999999999999888877663
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00049 Score=58.91 Aligned_cols=86 Identities=19% Similarity=0.250 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
...|+.++-+++++++|++++++|..+...+...++.+|+..-. --.++.+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi~-----------------------------~A~KP~~ 96 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFIY-----------------------------RAKKPFG 96 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCceee-----------------------------cccCccH
Confidence 36899999999999999999999999999999999999985311 0112334
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADI 198 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~i 198 (514)
..-.+.++.++...++|+||||.. .|+-.-+.+|+
T Consensus 97 ~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 97 RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 455788999999999999999986 79988888874
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0013 Score=65.40 Aligned_cols=37 Identities=8% Similarity=0.208 Sum_probs=31.4
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcC
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG 122 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~g 122 (514)
+.++..+++++|.+. .+++|+|||+......+....+
T Consensus 142 ~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~~ 178 (384)
T PLN02580 142 MSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLTE 178 (384)
T ss_pred CCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCCC
Confidence 678999999999988 5899999999999888765433
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00055 Score=62.73 Aligned_cols=97 Identities=20% Similarity=0.192 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH-cCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE-IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.|++.++++.|+++|+++.++|+.+.......... .++......+ +... ..-..+++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v----~~s~----------------~~~~~KP~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHI----YLSQ----------------DLGMRKPE 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEE----EEec----------------ccCCCCCC
Confidence 4789999999999999999999999886655443322 2332211110 0000 01112455
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
|+--..+++.++..++++++|||+..|+.+-+.+|+..
T Consensus 144 p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 144 ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 66668889999999999999999999999999999754
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00028 Score=65.24 Aligned_cols=98 Identities=17% Similarity=0.116 Sum_probs=67.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHH--HHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNT--AEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
-++.|++.++++.|+++|+++.++|+..... ........++......+. .. ...-..+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~----~s----------------~~~~~~K 152 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVV----ES----------------CLEGLRK 152 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEE----Ee----------------eecCCCC
Confidence 3578999999999999999999999875432 222222334322211110 00 0011134
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
+.|+--..+++.++..++++++|||...|+.+-+.||+-.
T Consensus 153 P~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 5666668888899988999999999999999999999743
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0016 Score=61.82 Aligned_cols=86 Identities=14% Similarity=0.272 Sum_probs=59.2
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHH---HHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEE
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNT---AEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLF 158 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 158 (514)
..++-|++.+.++.|+++|++++++|+|.... +....+..|+..... ..++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~--------------------------d~ll 169 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE--------------------------EHLL 169 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc--------------------------ceEE
Confidence 44577999999999999999999999998443 445566778753211 1233
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhh
Q 010234 159 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 193 (514)
Q Consensus 159 ~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml 193 (514)
.+.....|..-.+.+.+....+++|||..+|+...
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 33333344444555555566799999999999643
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00089 Score=66.18 Aligned_cols=94 Identities=10% Similarity=0.107 Sum_probs=76.3
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH----cCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE----IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
+.+++.++|++|+++|+++.++|..+...+..+.+. +++...... ......
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~-------------------------~~~~~~ 86 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDA-------------------------RSINWG 86 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeE-------------------------EEEecC
Confidence 479999999999999999999999999999999888 666432211 011224
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
+.|+.-.++++.++...+.+++|||+..|+.+.+.+...|.+-
T Consensus 87 pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred chHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 5667778899999999999999999999999999988776554
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00065 Score=67.22 Aligned_cols=101 Identities=14% Similarity=0.071 Sum_probs=67.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCC---------------ChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGD---------------NKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
++.|++.++++.|+++|++++++|+. ....+..+.+..|+.. ..+......+.
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d~i~i~~~~~s---------- 97 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--DEVLICPHFPE---------- 97 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--eeEEEeCCcCc----------
Confidence 57899999999999999999999994 2334555666666631 11100000000
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
+..-+.++.|.--..+++.++..++++++|||+.+|+.+-+.||+...
T Consensus 98 -----d~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 -----DNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -----ccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 000112334445566667777788999999999999999999997643
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00091 Score=60.39 Aligned_cols=98 Identities=16% Similarity=0.220 Sum_probs=72.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.+++.+++++|+ .+++++|+.+...+....+.+|+......+.. .++.. ......++.|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~----~~~~~------------~~~~~~KP~p 144 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFC----FDTAN------------PDYLLPKPSP 144 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEE----eeccc------------CccCCCCCCH
Confidence 47899999999997 47999999999999999999998653322111 00000 0000125566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
+--..+++.++..++++++|||+..|+.+-+.+|+..
T Consensus 145 ~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 6678889999999999999999999999999999754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0012 Score=59.05 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=85.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccc-----eecccChHHHhhhhH--------HHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDI-----SLKSLTGKEFMEMHD--------KKAHL 150 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~-----~~~~~~~~~~~~~~~--------~~~~~ 150 (514)
++.|++.++++.|++.=-.+++ |-.-...+.++|..+|+...+... .......++-.++.. ....+
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~-STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVI-STSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccCCceEE-eccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5789999999999877445554 444566788889988884322111 111111111000000 00000
Q ss_pred hhcCceEEEecChhh---------------HHHHHHHHhh---CCCEEEEEcCCcCCHHhhhhcC-c-ceeeCCCCcHHH
Q 010234 151 RQSGGLLFSRAEPRH---------------KQEIVRLLKE---DGEVVAMTGDGVNDAPALKLAD-I-GIAMGIAGTEVA 210 (514)
Q Consensus 151 ~~~~~~i~~~~~p~~---------------k~~iv~~l~~---~~~~v~~iGDg~ND~~ml~~A~-i-gvamg~~~~~~~ 210 (514)
...-..+|.|..|.. |.++++.+-+ .....+++||+..|..||+.+. - |+|+.-|+.+-+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 001112344444433 3444444332 2344789999999999999885 3 366666888877
Q ss_pred HhcccccccCCCchhHHHHHH
Q 010234 211 KEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 211 k~~ad~v~~~~~~~~i~~~i~ 231 (514)
...||..+.+.+....+.+|+
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 888998888888777666664
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0019 Score=61.13 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=63.2
Q ss_pred EEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHH--HHHHHcCCcc-cCccceecccChHHHhhhhHHHHHHhhc
Q 010234 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAE--AICREIGVFE-CNEDISLKSLTGKEFMEMHDKKAHLRQS 153 (514)
Q Consensus 77 G~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~--~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (514)
|.+.-..++.|++.++|++|+++|+++.++|+.+..... ...+++|+.. ....+ ++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~I----i~s~~~------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMI----ISSGEI------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceE----EccHHH-------------
Confidence 555556778999999999999999999999997665544 5678888854 22211 111110
Q ss_pred CceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc
Q 010234 154 GGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI 198 (514)
Q Consensus 154 ~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i 198 (514)
....-.+..+.++..++.++++||+.+|...+..++.
T Consensus 80 --------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 80 --------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred --------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 0011111223334456789999999999988865543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0011 Score=61.67 Aligned_cols=120 Identities=22% Similarity=0.257 Sum_probs=73.0
Q ss_pred CCChhHHHHHHHH--HHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 84 PPRNEVHQAIEDC--RAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 84 ~l~~~~~~~I~~l--~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
++.|+..++++.+ ++.|+.++|+|.-+......+.+.-|+......++.....-++--.+ ........-+.++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l-----~v~pyh~h~C~~C 145 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRL-----RVRPYHSHGCSLC 145 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceE-----EEeCccCCCCCcC
Confidence 6789999999999 45899999999999999999999999865433332211110000000 0000001112233
Q ss_pred Ch-hhHHHHHHHHhhC-------CCEEEEEcCCcCCH-HhhhhcCcceeeCCCCcH
Q 010234 162 EP-RHKQEIVRLLKED-------GEVVAMTGDGVNDA-PALKLADIGIAMGIAGTE 208 (514)
Q Consensus 162 ~p-~~k~~iv~~l~~~-------~~~v~~iGDg~ND~-~ml~~A~igvamg~~~~~ 208 (514)
++ .=|..+++.+... .++|++||||.||. |+++-..--++|.-.+-+
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~ 201 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYP 201 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCCh
Confidence 33 3477777776654 37999999999994 555433333444433433
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00097 Score=62.15 Aligned_cols=98 Identities=11% Similarity=0.128 Sum_probs=74.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.++|+.| ++++.++|+.+...+....+..|+....... .+++.+ .-..++.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~---v~~~~~----------------~~~~KP~ 144 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDK---LFSGYD----------------IQRWKPD 144 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcce---EeeHHh----------------cCCCCCC
Confidence 45778999999988 5999999999988888888888886533211 111111 0112456
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceee
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAM 202 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvam 202 (514)
|+--..+++.++..++++++|||+.+|+.+-+.||+.+..
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 7777888999999899999999999999999999987653
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0016 Score=58.95 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=71.9
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPR 164 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 164 (514)
+.|+ .+.++.|++. +++.++||.....+....+.+|+......+ ++.++ .-..++.|+
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i----~~~~~----------------~~~~KP~p~ 146 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAV----VAADD----------------VQHHKPAPD 146 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEE----Eehhh----------------ccCCCCChH
Confidence 4454 6899999865 899999999999999999999986533221 11111 112355667
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 165 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 165 ~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
--...++.++..++++++|||+.+|+.+-+.||+-+
T Consensus 147 ~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 147 TFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 778888999988899999999999999999999753
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0047 Score=54.75 Aligned_cols=51 Identities=18% Similarity=0.356 Sum_probs=42.8
Q ss_pred cEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH---cCC
Q 010234 73 LTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE---IGV 123 (514)
Q Consensus 73 l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~---~gi 123 (514)
+.+-|++..++..-|++.|++++|++++.+|-.+|.-..++-+.+.++ +|+
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 456799999999999999999999999999999998877666665544 566
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0053 Score=59.46 Aligned_cols=48 Identities=13% Similarity=0.209 Sum_probs=35.6
Q ss_pred EEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHH---HHHHHcCCc
Q 010234 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAE---AICREIGVF 124 (514)
Q Consensus 77 G~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~---~ia~~~gi~ 124 (514)
|++.-.++.-|++.++|++|+++|++++++||++..+.. .-.+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 444445667788999999999999999999997644333 334557763
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0055 Score=56.60 Aligned_cols=81 Identities=21% Similarity=0.229 Sum_probs=56.2
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHH---HHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEE
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNT---AEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLF 158 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 158 (514)
+.+.-|++.++++.++++|++|+++|||+... +..-..+.|+... . .++
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~---------------------------~Li 169 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-K---------------------------HLI 169 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-C---------------------------eee
Confidence 34678999999999999999999999999765 4444455676531 1 122
Q ss_pred Eec-Ch------hhHHHHHHHHhhCCCE-EEEEcCCcCCH
Q 010234 159 SRA-EP------RHKQEIVRLLKEDGEV-VAMTGDGVNDA 190 (514)
Q Consensus 159 ~~~-~p------~~k~~iv~~l~~~~~~-v~~iGDg~ND~ 190 (514)
-|. .. .-|.+.-+.+...+.+ ++.+||..+|+
T Consensus 170 LR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 170 LRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred ecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 222 11 1166666666666655 57799999998
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0019 Score=60.09 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=81.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+......+ +++.+ +.-.++.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~----v~~~d----------------v~~~KP~ 144 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVI----VTADD----------------VARGKPA 144 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchh----ccHHH----------------HhcCCCC
Confidence 368899999999999999999999999999999999999997654321 22222 1222678
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
|+--....+.|+..++++++|.|+.+.+.+.++||.-+
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 88889999999999999999999999999999999543
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0022 Score=58.64 Aligned_cols=95 Identities=9% Similarity=0.067 Sum_probs=61.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+++++|++++ +.+++|..+........+.+++...........+.+++ ....|
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------------~~~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------------DESKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc-------------------CcccH
Confidence 47899999999999875 67777776655555555666664321111101111000 01224
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhc--Ccce
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA--DIGI 200 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A--~igv 200 (514)
+--..+++.++ .+++++|||+.+|+.+-++| |+-+
T Consensus 134 ~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 134 KLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 44455666676 67899999999999999999 9753
|
2 hypothetical protein; Provisional |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.021 Score=56.53 Aligned_cols=35 Identities=6% Similarity=0.134 Sum_probs=31.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICR 119 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~ 119 (514)
.+.+++.++|++|. +|++++++|||....+..+..
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhc
Confidence 58899999999999 789999999999999998843
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0077 Score=54.00 Aligned_cols=120 Identities=20% Similarity=0.244 Sum_probs=74.6
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEECCCChHHHHHHHHHcCCcccCccceecccChHH-HhhhhHHHHHHhhc-CceEEEe
Q 010234 84 PPRNEVHQAIEDCRAAGI-RVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKE-FMEMHDKKAHLRQS-GGLLFSR 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi-~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~i~~~ 160 (514)
++.|+..++|+.+++.|. .++|+|--+.-....+.+..|+.+....+. +... ++.- ........ ...-+.+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~If----TNPa~~da~--G~L~v~pyH~~hsC~~ 157 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIF----TNPACVDAS--GRLLVRPYHTQHSCNL 157 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHh----cCCcccCCC--CcEEeecCCCCCccCc
Confidence 678999999999999997 999999999999999999998843211110 0000 0000 00000000 0112222
Q ss_pred cChh-hHHHHHHHHhhC-------CCEEEEEcCCcCC-HHhhhhcCcceeeCCCCcHH
Q 010234 161 AEPR-HKQEIVRLLKED-------GEVVAMTGDGVND-APALKLADIGIAMGIAGTEV 209 (514)
Q Consensus 161 ~~p~-~k~~iv~~l~~~-------~~~v~~iGDg~ND-~~ml~~A~igvamg~~~~~~ 209 (514)
+.+. =|..+++++... .++++++|||.|| +|+++..+.-+||--.+-+.
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 2221 255566655432 3589999999999 78999888888886444443
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.005 Score=58.10 Aligned_cols=94 Identities=12% Similarity=0.012 Sum_probs=65.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+++++|++. +++.++|+.+.. .+..|+......+. ..+ ..-..++.|
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~----~~~----------------~~~~~KP~p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVL----RAG----------------PHGRSKPFS 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeE----ecc----------------cCCcCCCcH
Confidence 5679999999999875 999999997654 24566643222110 000 001123455
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCcceeeC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGIAMG 203 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~igvamg 203 (514)
+--..+++.++..++++++|||+ ..|+.+-+.||+-.+..
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 56677788888889999999999 59999999999765544
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.014 Score=51.22 Aligned_cols=89 Identities=19% Similarity=0.246 Sum_probs=70.1
Q ss_pred CCCChhHHHHHHHHHHcCCc--EEEECCC-------ChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhc
Q 010234 83 DPPRNEVHQAIEDCRAAGIR--VMVITGD-------NKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQS 153 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~--v~i~TG~-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (514)
+++.|+..+.+++|++.+.. ++|+|.. ....|..+.+.+|+.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----------------------------- 108 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP----------------------------- 108 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-----------------------------
Confidence 45789999999999999875 9999997 488899999999973
Q ss_pred CceEEEecChhhHHHHHHHHhhC-----CCEEEEEcCCc-CCHHhhhhcC-ccee
Q 010234 154 GGLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGV-NDAPALKLAD-IGIA 201 (514)
Q Consensus 154 ~~~i~~~~~p~~k~~iv~~l~~~-----~~~v~~iGDg~-ND~~ml~~A~-igva 201 (514)
...+....|....++.++++.. .+++++|||-. .|+-|-...| .+|-
T Consensus 109 -vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~til 162 (168)
T PF09419_consen 109 -VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTIL 162 (168)
T ss_pred -EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEE
Confidence 1123334566677888888765 88999999975 8998888777 4543
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.01 Score=55.37 Aligned_cols=97 Identities=14% Similarity=0.234 Sum_probs=75.2
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.-+..+++.+++++++++ ++++++|.-.........+++|+.+....+.... ..-..++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~--------------------~~g~~KP 155 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISE--------------------DVGVAKP 155 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEec--------------------ccccCCC
Confidence 347889999999999998 9999999998889999999999765443321110 1123455
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcc
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG 199 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~ig 199 (514)
.|+-=..+++.++..++++++|||+. ||+..-+.+|.-
T Consensus 156 ~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 156 DPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred CcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 66666889999999999999999976 787888888864
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.022 Score=54.09 Aligned_cols=46 Identities=17% Similarity=0.291 Sum_probs=38.8
Q ss_pred EEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH
Q 010234 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120 (514)
Q Consensus 75 ~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~ 120 (514)
+=|++.-.++.-|++.++|++|+++|++++++|..+..+...++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 4588888889999999999999999999999999886666644444
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0098 Score=58.53 Aligned_cols=98 Identities=14% Similarity=0.188 Sum_probs=62.8
Q ss_pred EEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHH---HHcCCcccCccceecccChHHHhhhhHHHHHHhhc
Q 010234 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAIC---REIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQS 153 (514)
Q Consensus 77 G~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia---~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (514)
|++.-.+.+-|++.++|++|+++|++++++|+++..+...++ +++|+......
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~------------------------ 92 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEE------------------------ 92 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhh------------------------
Confidence 666666778899999999999999999999999966666665 55776432221
Q ss_pred CceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 154 GGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 154 ~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
++... ......++..+..+...++++++..|...++.+|+-+.-|
T Consensus 93 ---I~ts~--~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~g 137 (311)
T PLN02645 93 ---IFSSS--FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLGG 137 (311)
T ss_pred ---EeehH--HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEecC
Confidence 11111 1122223322222223355556678899999988765433
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.046 Score=48.48 Aligned_cols=97 Identities=22% Similarity=0.291 Sum_probs=61.8
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHh-----hcCceEEE
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLR-----QSGGLLFS 159 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~ 159 (514)
+.+++.+++.+|+++|++++++|.-+ |+-. ...+...+...++.-.... .-+...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~r-------gyf~~~~f~~~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGR-------GYFTEADFDKLHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Cccc-------cCccHHHHHHHHHHHHHHHHHcCCccceEEEC
Confidence 67999999999999999999999743 2211 1122222222222111110 01122333
Q ss_pred e-----------cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 160 R-----------AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 160 ~-----------~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
. +.|.--.++++.++.......+|||...|+.+-..+|+.
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 3 333444777788888889999999999999999999875
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.016 Score=46.56 Aligned_cols=49 Identities=18% Similarity=0.344 Sum_probs=35.7
Q ss_pred EEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHH---HHcCCcc
Q 010234 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAIC---REIGVFE 125 (514)
Q Consensus 77 G~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia---~~~gi~~ 125 (514)
|++...+++-|++.++|+.|+++|++++++|..+..+...++ +.+|+.-
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 455566778899999999999999999999998755544444 5567753
|
... |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.0084 Score=45.18 Aligned_cols=61 Identities=26% Similarity=0.338 Sum_probs=45.0
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCc---ceeeCCCCcHHHH---hcccccccC
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADI---GIAMGIAGTEVAK---EASDMVLAD 220 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~i---gvamg~~~~~~~k---~~ad~v~~~ 220 (514)
+++|.--..+.+.++...+++++|||+ ..|+.+-+.+|+ .|.-|....+... ..+|+|+.+
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 456667788888998889999999999 999999999994 4444433333322 467887754
|
... |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.03 Score=58.57 Aligned_cols=90 Identities=16% Similarity=0.200 Sum_probs=61.1
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCCh------------HHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNK------------NTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQ 152 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (514)
+.|++.++|++|+++|++++|+|.... ..+..+.+.+|+.- .. +.+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipf--dv-----iia~-------------- 256 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPF--QV-----FIAI-------------- 256 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCce--EE-----EEeC--------------
Confidence 469999999999999999999999765 34666677777631 00 0000
Q ss_pred cCceEEEecChhhHHHHHHHHh----hCCCEEEEEcCCcCCHHhhhhc
Q 010234 153 SGGLLFSRAEPRHKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLA 196 (514)
Q Consensus 153 ~~~~i~~~~~p~~k~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A 196 (514)
....+.++.|.--..+++.++ .+.+++++|||...|+.+-+.|
T Consensus 257 -~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~a 303 (526)
T TIGR01663 257 -GAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAA 303 (526)
T ss_pred -CCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhc
Confidence 011122344555566677664 5678999999999998775544
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.11 Score=44.94 Aligned_cols=109 Identities=15% Similarity=0.143 Sum_probs=69.0
Q ss_pred EEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHH---HHc-----CCcccCccceecccChHHHhhhhHHH
Q 010234 76 VGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAIC---REI-----GVFECNEDISLKSLTGKEFMEMHDKK 147 (514)
Q Consensus 76 lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia---~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~ 147 (514)
+.+++- |..++++.+..++++++|++++.+|+|+...+...- ... ++. ...+ .++.+.+..
T Consensus 20 ~~~~G~-d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv---~~sP~~l~~----- 88 (157)
T PF08235_consen 20 LPILGK-DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPV---LLSPDSLFS----- 88 (157)
T ss_pred hhccCc-hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCE---EECCcchhh-----
Confidence 334444 589999999999999999999999999966555433 333 221 1111 011000000
Q ss_pred HHHhhcCceEEEecChhhHHHHHHHHhhC-----CCEEEEEcCCcCCHHhhhhcCcc
Q 010234 148 AHLRQSGGLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 148 ~~~~~~~~~i~~~~~p~~k~~iv~~l~~~-----~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
.....+..+.+.+.|...++.++.. ..-.+++|+..+|+.+.+++|+.
T Consensus 89 ----al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 89 ----ALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ----hhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0001133444556788888877654 34568899999999999998865
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.033 Score=49.58 Aligned_cols=86 Identities=12% Similarity=0.138 Sum_probs=63.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++ ++.++|+.+........+..|+...... +++.++ .-..++.|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~----v~~~~~----------------~~~~KP~p 142 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDR----AFSVDT----------------VRAYKPDP 142 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhh----hccHhh----------------cCCCCCCH
Confidence 57899999988 3789999999999989999988543221 111111 11235666
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 196 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A 196 (514)
+--..+++.++..++++++|||+..|+.+-+++
T Consensus 143 ~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 143 VVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 666888999999999999999999999876653
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.049 Score=50.89 Aligned_cols=82 Identities=21% Similarity=0.340 Sum_probs=54.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChH---HHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKN---TAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
+.-|++.+.++.++++|++|+++|||+.. .+..=.++.|+..... .++..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~---------------------------l~lr~ 167 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDH---------------------------LILRP 167 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSC---------------------------GEEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccch---------------------------hcccc
Confidence 45688999999999999999999999855 3333345556543111 11111
Q ss_pred cC-------hhhHHHHHHHHhhCCC-EEEEEcCCcCCHHh
Q 010234 161 AE-------PRHKQEIVRLLKEDGE-VVAMTGDGVNDAPA 192 (514)
Q Consensus 161 ~~-------p~~k~~iv~~l~~~~~-~v~~iGDg~ND~~m 192 (514)
.. .+-|..-.+.+.+.|. .++.+||..+|+.-
T Consensus 168 ~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 168 DKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 11 1236677777777754 56779999999865
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.18 Score=47.46 Aligned_cols=66 Identities=26% Similarity=0.297 Sum_probs=32.3
Q ss_pred ceEEEecChhhHHHHHHHHhhCC-------CEEEEEcCCcCCHHhhhhc------CcceeeCCCCcHHHHhcccccccC
Q 010234 155 GLLFSRAEPRHKQEIVRLLKEDG-------EVVAMTGDGVNDAPALKLA------DIGIAMGIAGTEVAKEASDMVLAD 220 (514)
Q Consensus 155 ~~i~~~~~p~~k~~iv~~l~~~~-------~~v~~iGDg~ND~~ml~~A------~igvamg~~~~~~~k~~ad~v~~~ 220 (514)
..+-.+..-..|...++.+-... ..++++||...|-.||+.. ++++.++..........|+|-+.+
T Consensus 155 ~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 155 KVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp SEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 44555666666877777665433 3689999999999999874 567777733222334456665544
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.5 Score=46.81 Aligned_cols=36 Identities=3% Similarity=0.152 Sum_probs=31.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE 120 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~ 120 (514)
.+.+++.++|++|. ++..++++|||+...+..+..-
T Consensus 120 ~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~ 155 (354)
T PLN02151 120 FMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKL 155 (354)
T ss_pred cCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCC
Confidence 47899999999998 5689999999999998887654
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.079 Score=49.12 Aligned_cols=101 Identities=14% Similarity=0.102 Sum_probs=70.0
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.-++-++..+++++||++|..+.++|.-..+ .+.+...+|+......+ ..+. ..=.-++
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~v---v~S~-----------------e~g~~KP 169 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDFV---VESC-----------------EVGLEKP 169 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhhh---hhhh-----------------hhccCCC
Confidence 3345677779999999999888888875543 34666777774322111 0000 1112244
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCc-ceeeC
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADI-GIAMG 203 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~i-gvamg 203 (514)
+|.-=...++.++..+++++.+||. .||+..-+.+|. ++-+.
T Consensus 170 Dp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 170 DPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred ChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 5566688999999999999999996 599999999994 56666
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.46 Score=49.67 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=60.8
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH-cCCccc-Cccce---ecccChHHHhhhhHHHHHHhhcCceEEE
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE-IGVFEC-NEDIS---LKSLTGKEFMEMHDKKAHLRQSGGLLFS 159 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~-~gi~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (514)
+++++.+. ++++|.+ +++|+-+...++.++++ +|++.- ...+. ...++|. +-.
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~------------------i~g 168 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF------------------MKK 168 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee------------------ecC
Confidence 56665554 4567754 99999999999999987 898631 00000 0001100 000
Q ss_pred --ecChhhHHHHHHH-HhhCCCEEEEEcCCcCCHHhhhhcCcceeeCC
Q 010234 160 --RAEPRHKQEIVRL-LKEDGEVVAMTGDGVNDAPALKLADIGIAMGI 204 (514)
Q Consensus 160 --~~~p~~k~~iv~~-l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~ 204 (514)
.+.-++|.+-++. ++..... .+.||+.||.+||+.|+.+++++.
T Consensus 169 ~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 169 PGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence 0223456555543 3333233 899999999999999999999984
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.29 Score=46.31 Aligned_cols=32 Identities=16% Similarity=0.355 Sum_probs=27.9
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHH
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNT 113 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~ 113 (514)
+.+.-|++.+..+.+++.|++++++|||....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 44667899999999999999999999998543
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.087 Score=51.98 Aligned_cols=111 Identities=15% Similarity=0.235 Sum_probs=68.6
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc-C-------CcccCccceeccc------ChHHHhhhhHHHHHH
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI-G-------VFECNEDISLKSL------TGKEFMEMHDKKAHL 150 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~-g-------i~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 150 (514)
..|++.+++++|+++|+++.++|+.+...+..+.+.+ | +......+....- .+..+..+.......
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~ 264 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSL 264 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCcc
Confidence 4789999999999999999999999999999999986 6 3221111100000 001111110000000
Q ss_pred h------hcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhh-hcCc
Q 010234 151 R------QSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALK-LADI 198 (514)
Q Consensus 151 ~------~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~-~A~i 198 (514)
. .....+++.- .-..+.+.++..+++|++|||.. .|+-.-+ .+|.
T Consensus 265 ~~~~~~~l~~g~vY~gG---n~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 265 KWGEVDGLEPGKVYSGG---SLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred cCCccccccCCCeEeCC---CHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 0 0112233332 23667778888999999999986 7988777 6774
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.54 Score=44.74 Aligned_cols=49 Identities=16% Similarity=0.337 Sum_probs=40.6
Q ss_pred EEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH---cCCc
Q 010234 76 VGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE---IGVF 124 (514)
Q Consensus 76 lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~---~gi~ 124 (514)
=|++-..+.+-|++.++++.|++.|-++.++|..+-.+-+.++++ +|+.
T Consensus 30 DGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 30 DGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 377778888999999999999999999999999887777666554 5553
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.32 Score=45.70 Aligned_cols=47 Identities=23% Similarity=0.346 Sum_probs=37.0
Q ss_pred EEecccCCCChhHHHHHHHHHHcCCcEEEEC---CCChHHHHHHHHH-cCC
Q 010234 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVIT---GDNKNTAEAICRE-IGV 123 (514)
Q Consensus 77 G~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~T---G~~~~~a~~ia~~-~gi 123 (514)
|++.-.+++-+++.++|+.++++|++++++| |++.........+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 5555556677899999999999999999998 7777766655555 676
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.057 Score=47.51 Aligned_cols=97 Identities=13% Similarity=0.080 Sum_probs=65.0
Q ss_pred ccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 81 LRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 81 ~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
+.-..||++.+.++.|.+. +.+++.|......|..+.+.++..... + ...+..+. ....
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~--f-~~~l~r~~----------------~~~~- 97 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKV--I-SRRLYRES----------------CVFT- 97 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCE--E-eEEEEccc----------------cEEe-
Confidence 3346899999999999987 999999999999999999988864210 0 00010000 0000
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
.+. -.+-++.++...++|++|||...|+.+-+.+++-+
T Consensus 98 -~~~-~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 98 -NGK-YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred -CCC-EEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 011 12224455667789999999999998777766554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.13 Score=48.67 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=60.5
Q ss_pred ChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhh
Q 010234 86 RNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRH 165 (514)
Q Consensus 86 ~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~ 165 (514)
.++..++++.++++|+++ ++|+.....+.......|.. . +....+ . ...+.....+++|+-
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g-------------~-~~~~i~---~-~g~~~~~~gKP~~~~ 200 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG-------------Y-YAELIK---Q-LGGKVIYSGKPYPAI 200 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc-------------H-HHHHHH---H-hCCcEecCCCCCHHH
Confidence 478888999888889997 77887655443322222211 0 000000 0 011122345666776
Q ss_pred HHHHHHHHhhC-CCEEEEEcCC-cCCHHhhhhcCcce
Q 010234 166 KQEIVRLLKED-GEVVAMTGDG-VNDAPALKLADIGI 200 (514)
Q Consensus 166 k~~iv~~l~~~-~~~v~~iGDg-~ND~~ml~~A~igv 200 (514)
-..+++.++.. .++++||||+ .+|+.+-+.+|+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 201 FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 77788888754 5789999999 69999999999753
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.24 Score=47.33 Aligned_cols=42 Identities=5% Similarity=0.130 Sum_probs=38.7
Q ss_pred ChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccC
Q 010234 86 RNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN 127 (514)
Q Consensus 86 ~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~ 127 (514)
.|++.+++++|+++|++++++|+.....+....+.+|+....
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YF 189 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYF 189 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCccc
Confidence 499999999999999999999999999999999999997543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.38 Score=44.84 Aligned_cols=133 Identities=23% Similarity=0.293 Sum_probs=72.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec--
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA-- 161 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-- 161 (514)
.+|+++.+.++.|++.+|++.|+|+.-......+.++.|...++..+.+.-+.=++ +..+..-.
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~--------------~g~l~gF~~~ 155 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDE--------------DGVLVGFKGP 155 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-T--------------TSBEEEE-SS
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECC--------------cceEeecCCC
Confidence 57999999999999999999999999999999999988876665444322111000 01111111
Q ss_pred --ChhhHHH-HH---HHHhh--CCCEEEEEcCCcCCHHhhhhc-C--cceeeC--CCCcH----HHHhcccccccCCCch
Q 010234 162 --EPRHKQE-IV---RLLKE--DGEVVAMTGDGVNDAPALKLA-D--IGIAMG--IAGTE----VAKEASDMVLADDDFS 224 (514)
Q Consensus 162 --~p~~k~~-iv---~~l~~--~~~~v~~iGDg~ND~~ml~~A-~--igvamg--~~~~~----~~k~~ad~v~~~~~~~ 224 (514)
.+-.|.+ .+ .+.+. ...+|+-.||+..|+.|-.-. + .-+.+| |...+ .-+++-|+|+.++.--
T Consensus 156 lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm 235 (246)
T PF05822_consen 156 LIHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTM 235 (246)
T ss_dssp ---TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-
T ss_pred ceEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCc
Confidence 1112221 11 22222 356899999999999998766 2 112222 22333 3456779999876655
Q ss_pred hHHHHH
Q 010234 225 TIVSAV 230 (514)
Q Consensus 225 ~i~~~i 230 (514)
.++..|
T Consensus 236 ~v~~~i 241 (246)
T PF05822_consen 236 DVPNAI 241 (246)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 555544
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.35 E-value=1.1 Score=40.60 Aligned_cols=99 Identities=12% Similarity=0.128 Sum_probs=77.9
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPR 164 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 164 (514)
+.+..++.+-.|+.++ -|+.|.-...-|.++.+.+||.++.+.+........ .+..+.|+++++
T Consensus 101 PD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np--------------~~~~~vcKP~~~ 164 (244)
T KOG3109|consen 101 PDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNP--------------IEKTVVCKPSEE 164 (244)
T ss_pred CCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCC--------------CCCceeecCCHH
Confidence 4455567777777665 899999999999999999999887665433222111 125688999999
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCcc
Q 010234 165 HKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 165 ~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
.-..+.+..+.. +++++.|-|+.+.+..-+..|..
T Consensus 165 afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~ 200 (244)
T KOG3109|consen 165 AFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLK 200 (244)
T ss_pred HHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccce
Confidence 999999999988 89999999999999999988843
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.2 Score=41.77 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=29.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHH
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAE 115 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~ 115 (514)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 468899999999999999999999999976544
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.32 Score=42.21 Aligned_cols=85 Identities=22% Similarity=0.393 Sum_probs=52.9
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHH----HHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNT----AEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
+++-+++.|+-=+++|-.++.+|||.... ++.+++...|...+ .++|+-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~---------------------------pv~f~G 167 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN---------------------------PVIFAG 167 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc---------------------------ceeecc
Confidence 34445677777778899999999998654 34455555553221 233333
Q ss_pred cCh----hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ce
Q 010234 161 AEP----RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GI 200 (514)
Q Consensus 161 ~~p----~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gv 200 (514)
..| .+|... ++. ...-+.-||+.||+.+-+.||+ ||
T Consensus 168 dk~k~~qy~Kt~~---i~~-~~~~IhYGDSD~Di~AAkeaG~RgI 208 (237)
T COG3700 168 DKPKPGQYTKTQW---IQD-KNIRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred CCCCcccccccHH---HHh-cCceEEecCCchhhhHHHhcCccce
Confidence 322 223222 222 2345778999999999999984 45
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.47 Score=45.43 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=37.8
Q ss_pred ChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc
Q 010234 86 RNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126 (514)
Q Consensus 86 ~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~ 126 (514)
.|++.++|++|+++|++++++|+.+...+....+.+|+...
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 49999999999999999999999888999999999999654
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.44 E-value=2.5 Score=40.26 Aligned_cols=122 Identities=14% Similarity=0.181 Sum_probs=74.2
Q ss_pred cCCCChhHHHHHHHHHHc-CCcEEEECCCChHHHHHHHHHcCC--cccCccce--------ecccChHHHh---hhhHHH
Q 010234 82 RDPPRNEVHQAIEDCRAA-GIRVMVITGDNKNTAEAICREIGV--FECNEDIS--------LKSLTGKEFM---EMHDKK 147 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~-Gi~v~i~TG~~~~~a~~ia~~~gi--~~~~~~~~--------~~~~~~~~~~---~~~~~~ 147 (514)
...+.++..+.+++|.+. ..-++|+|||+.........-.|+ ...++... .......... ++.+..
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l 117 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAIL 117 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHH
Confidence 446889999999999877 456999999999999988764333 32222111 1111111111 010000
Q ss_pred H-----------------------------------------------HHhhcCceEEEecChhhHHHHHHHH-hhCCC-
Q 010234 148 A-----------------------------------------------HLRQSGGLLFSRAEPRHKQEIVRLL-KEDGE- 178 (514)
Q Consensus 148 ~-----------------------------------------------~~~~~~~~i~~~~~p~~k~~iv~~l-~~~~~- 178 (514)
+ .....+.++.+|++-..|...++.+ +..+.
T Consensus 118 ~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~ 197 (266)
T COG1877 118 EYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD 197 (266)
T ss_pred HHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC
Confidence 0 0001134566777777788888744 44443
Q ss_pred --EEEEEcCCcCCHHhhhhcC----cceeeC
Q 010234 179 --VVAMTGDGVNDAPALKLAD----IGIAMG 203 (514)
Q Consensus 179 --~v~~iGDg~ND~~ml~~A~----igvamg 203 (514)
-+++.||...|-.||+..+ ++|-+|
T Consensus 198 ~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 198 GRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred CCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 4899999999999999987 455555
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=90.63 E-value=1.9 Score=39.21 Aligned_cols=151 Identities=10% Similarity=0.093 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHH
Q 010234 15 SRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIE 94 (514)
Q Consensus 15 ~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~ 94 (514)
.++..+...+.+.+.|.|++++=.-. .--. .++.- +.+-.++. ..+-..++|+.++.++
T Consensus 27 ~~~~~~~~v~~L~~~GIk~Va~D~Dn---TlI~--------~HsgG-----~~~~~~~~-----~~~~~~~tpefk~~~~ 85 (219)
T PTZ00445 27 PHESADKFVDLLNECGIKVIASDFDL---TMIT--------KHSGG-----YIDPDNDD-----IRVLTSVTPDFKILGK 85 (219)
T ss_pred HHHHHHHHHHHHHHcCCeEEEecchh---hhhh--------hhccc-----ccCCCcch-----hhhhccCCHHHHHHHH
Confidence 34556677888999999999875321 1000 00000 00000000 1112247999999999
Q ss_pred HHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCce------------------
Q 010234 95 DCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGL------------------ 156 (514)
Q Consensus 95 ~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 156 (514)
+|+++||+++++|=..... +...+. ...+.|+++.+..-........-..
T Consensus 86 ~l~~~~I~v~VVTfSd~~~---------~~~~~~---~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~ 153 (219)
T PTZ00445 86 RLKNSNIKISVVTFSDKEL---------IPSENR---PRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPL 153 (219)
T ss_pred HHHHCCCeEEEEEccchhh---------ccccCC---cceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhh
Confidence 9999999999999665433 111110 1123333332221111000000001
Q ss_pred EEEecChhh--H--HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc
Q 010234 157 LFSRAEPRH--K--QEIVRLLKEDGEVVAMTGDGVNDAPALKLADI 198 (514)
Q Consensus 157 i~~~~~p~~--k--~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i 198 (514)
-...+.|+. - .++++..+..+++++.|=|....+.+.+..|+
T Consensus 154 gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 154 GLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred cccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 122345555 3 67888889999999999999999999999885
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=88.50 E-value=0.83 Score=40.27 Aligned_cols=42 Identities=12% Similarity=0.249 Sum_probs=31.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECC-CChHHHHHHHHHcCCc
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITG-DNKNTAEAICREIGVF 124 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG-~~~~~a~~ia~~~gi~ 124 (514)
=.+-|++.+.|+.|+++|+++.++|- +.+..|+.+.+.+++.
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 35789999999999999999999994 6688999999999997
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.21 E-value=3.1 Score=38.39 Aligned_cols=86 Identities=14% Similarity=0.215 Sum_probs=55.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHH----HHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEE
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNT----AEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFS 159 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (514)
+.-||+.|.++-.-+.|..+..+|.|..+. +..=..+.|+...... ..++-
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~-------------------------~~llk 176 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLES-------------------------HLLLK 176 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccccc-------------------------ceEEe
Confidence 456899999999999999999999998665 3333445566442221 11222
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhh
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 195 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~ 195 (514)
-....|..-.+.+++..+.|+-|||..+|..-...
T Consensus 177 -k~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 177 -KDKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred -eCCCcHHHHHHHHhhccceeeEecCchhhhcchhh
Confidence 22223333333444477789999999999865443
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.84 E-value=1.4 Score=40.66 Aligned_cols=101 Identities=13% Similarity=0.086 Sum_probs=71.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcC-CcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG-VFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.+-||+.+.++.|+..|+++.++|+.+..+...-.+..+ +......... .++. .+-..++.
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~--~d~~----------------~v~~gKP~ 153 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVL--GDDP----------------EVKNGKPD 153 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCee--cCCc----------------cccCCCCC
Confidence 456799999999999999999999997666555444443 3221111000 1111 11222567
Q ss_pred hhhHHHHHHHHhhCC-CEEEEEcCCcCCHHhhhhcCcceee
Q 010234 163 PRHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLADIGIAM 202 (514)
Q Consensus 163 p~~k~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~igvam 202 (514)
|+--....+.++..+ +.++++.|+.+=+.+.++||.-+-|
T Consensus 154 Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~ 194 (222)
T KOG2914|consen 154 PDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVG 194 (222)
T ss_pred chHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEE
Confidence 777788888999888 9999999999999999999966554
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=85.58 E-value=16 Score=41.02 Aligned_cols=38 Identities=13% Similarity=0.193 Sum_probs=32.3
Q ss_pred CChhHHHHHHHHHHc-CCcEEEECCCChHHHHHHHHHcC
Q 010234 85 PRNEVHQAIEDCRAA-GIRVMVITGDNKNTAEAICREIG 122 (514)
Q Consensus 85 l~~~~~~~I~~l~~~-Gi~v~i~TG~~~~~a~~ia~~~g 122 (514)
+.+++.+++++|.+. +..|+|+|||+..........++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 678899999999865 78999999999999998876543
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=83.96 E-value=1.6 Score=42.88 Aligned_cols=41 Identities=10% Similarity=0.076 Sum_probs=34.5
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCc
Q 010234 158 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADI 198 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~i 198 (514)
+.+++|.--..+++.++...++++||||.. +|+.+-+.||+
T Consensus 228 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~ 269 (311)
T PLN02645 228 VGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGC 269 (311)
T ss_pred CCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCC
Confidence 345666666778888888899999999997 99999999994
|
|
| >PF14336 DUF4392: Domain of unknown function (DUF4392) | Back alignment and domain information |
|---|
Probab=83.04 E-value=6 Score=38.36 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=29.1
Q ss_pred ChhHHHHHHHHHHcCCcEEEECCCChHH-HHHHHHHcCC
Q 010234 86 RNEVHQAIEDCRAAGIRVMVITGDNKNT-AEAICREIGV 123 (514)
Q Consensus 86 ~~~~~~~I~~l~~~Gi~v~i~TG~~~~~-a~~ia~~~gi 123 (514)
.+++...-+.|++.|.+++++|.+.... .+...+.++.
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 6888888899999999999999886444 3445555555
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 514 | ||||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-128 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-128 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-128 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-127 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-54 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-51 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 6e-51 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-50 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 8e-27 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 5e-20 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-17 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-17 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-17 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 9e-16 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-15 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 4e-15 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 4e-15 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 5e-15 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-12 | ||
| 2voy_K | 32 | Cryoem Model Of Copa, The Copper Transporting Atpas | 9e-09 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-08 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-08 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 1e-08 | ||
| 2voy_L | 21 | Cryoem Model Of Copa, The Copper Transporting Atpas | 5e-04 |
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2VOY|K Chain K, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 32 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2VOY|L Chain L, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 21 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 514 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-179 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-167 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-120 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-108 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-40 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 5e-39 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-35 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-34 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 8e-33 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-32 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-14 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-10 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 4e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 3e-06 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 3e-06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 4e-06 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 6e-06 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 9e-06 | |
| 2voy_D | 26 | Sarcoplasmic/endoplasmic reticulum calcium ATPase | 2e-05 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 3e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 4e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 5e-05 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 7e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 2e-04 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 3e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 3e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 3e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 4e-04 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 4e-04 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 5e-04 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 6e-04 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 6e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 6e-04 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 7e-04 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 7e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 8e-04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 8e-04 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 9e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 693 bits (1792), Expect = 0.0
Identities = 251/497 (50%), Positives = 317/497 (63%), Gaps = 37/497 (7%)
Query: 2 QLLDGSVVPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHTL 59
+ + VP+ + IL + E TG LRCL A +D +
Sbjct: 529 VRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD----------TPPKREEMV 578
Query: 60 LLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICR 119
L + S + E LTFVG+VG+ DPPR EV +I+ CR AGIRV++ITGDNK TA AICR
Sbjct: 579 LDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR 638
Query: 120 EIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEV 179
IG+F NE+++ ++ TG+EF ++ + F+R EP HK +IV L+ E+
Sbjct: 639 RIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEI 698
Query: 180 VAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNN 239
AMTGDGVNDAPALK A+IGIAMG +GT VAK AS+MVLADD+FSTIV+AV EGR+IYNN
Sbjct: 699 TAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNN 757
Query: 240 MKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDI 299
MK FIRY+ISSN+GEV IF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DI
Sbjct: 758 MKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDI 817
Query: 300 MKKPPRRSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTY 359
M +PPR + LIS W+ FRY+ IG YVG ATVG W+ + + VTY
Sbjct: 818 MDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMY---------AEDGPGVTY 868
Query: 360 SQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNS 419
QLT++ QC F C+ F + MT++LSVLV IEM N+
Sbjct: 869 HQLTHFMQCTEDHP-------------HFEGLDCEIFEAP--EPMTMALSVLVTIEMCNA 913
Query: 420 LNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLA 479
LN+LSE+ SL+ MPPWVN WLL ++ +S LHFLILYV L IF + L +WL+VL
Sbjct: 914 LNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLK 973
Query: 480 IAFPVVLIDEVLKFVGR 496
I+ PV+ +DE+LKF+ R
Sbjct: 974 ISLPVIGLDEILKFIAR 990
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 529 bits (1364), Expect = e-179
Identities = 143/524 (27%), Positives = 229/524 (43%), Gaps = 52/524 (9%)
Query: 2 QLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLL 61
L+ G +PLD + R A + R LGF L + + G
Sbjct: 531 ILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQL-YLSEKDYPPGYAF-------- 581
Query: 62 NPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI 121
+ GL+F GLV + DPPR V A+ CR AGIRV+++TGD+ TA+AI +
Sbjct: 582 DVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV 641
Query: 122 GVF----ECNEDISLKS----------------LTGKEFMEMHDK--KAHLRQSGGLLFS 159
G+ E EDI+ + + G + +M LR ++F+
Sbjct: 642 GIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFA 701
Query: 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLA 219
R P+ K IV + G +VA+TGDGVND+PALK ADIG+AMGIAG++ AK A+DM+L
Sbjct: 702 RTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILL 761
Query: 220 DDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVN 279
DD+F++IV+ V +GR I++N+K I Y ++ NI E+ + +P L + +L++
Sbjct: 762 DDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIE 821
Query: 280 LVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFII 337
L TD P+ +L + + DIM PR + D + + Y IG A +
Sbjct: 822 LCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFT 881
Query: 338 WYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFH 397
+ + +G P W N + +
Sbjct: 882 AMAQEGWFPLLCVGLR---------------PQWENHHLQDLQDSY----GQEWTFGQRL 922
Query: 398 GGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYV 457
+ T+ + ++ + L + S + N L++A+ + + Y
Sbjct: 923 YQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYC 982
Query: 458 PFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGRCTNGS 501
P + IF +P+ F WL+ + + + DE+ K RC GS
Sbjct: 983 PGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGS 1026
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 499 bits (1288), Expect = e-167
Identities = 145/519 (27%), Positives = 233/519 (44%), Gaps = 53/519 (10%)
Query: 2 QLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLL 61
LL+G+ PL + +A E+ R LGF + LP ED
Sbjct: 526 ILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHF-ALP--------EDKYNEGYPF 576
Query: 62 NPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI 121
+ L FVGL+ + DPPR V A+ CR+AGI+V+++TGD+ TA+AI + +
Sbjct: 577 DADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 636
Query: 122 GVF----ECNEDISLKS----------------LTGKEFMEMHDK--KAHLRQSGGLLFS 159
G+ E EDI+ + + G + ++ + L ++F+
Sbjct: 637 GIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFA 696
Query: 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLA 219
R P+ K IV + G +VA+TGDGVND+PALK ADIG+AMGI+G++V+K+A+DM+L
Sbjct: 697 RTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILL 756
Query: 220 DDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVN 279
DD+F++IV+ V EGR I++N+K I Y ++SNI E+ +P L V +L ++
Sbjct: 757 DDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCID 816
Query: 280 LVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFR--YLVIGLYVGIATVGVFII 337
L TD PA +L + + DIMK+ PR + L Y IG+ + + +
Sbjct: 817 LGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFV 876
Query: 338 WYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFH 397
FL ++LIG W + F Q +T+ F
Sbjct: 877 ILAENGFLPMDLIGKRVR-----------WDDRWISDVEDSF---GQQWTYEQRKIVEFT 922
Query: 398 GGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYV 457
T +V ++ + + + S+ N L+ + L + Y
Sbjct: 923 -----CHTSFFISIVVVQWADLIICKTRRNSIFQQ-GMKNKILIFGLFEETALAAFLSYC 976
Query: 458 PFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGR 496
P + PL + W + + L DE+ +F+ R
Sbjct: 977 PGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-120
Identities = 108/491 (21%), Positives = 167/491 (34%), Gaps = 78/491 (15%)
Query: 7 SVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
+ + +L + + + LR L A + +
Sbjct: 431 ELAKASNDLSKKVLSIIDKYAERGLRSLAVARQV--------------------VPEKTK 470
Query: 67 ASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC 126
S FVGL+ L DPPR++ + I G+ V +ITGD + R +G+
Sbjct: 471 ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT- 529
Query: 127 NEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 186
N S L + + F+ P HK EIV+ L+E +V MTGDG
Sbjct: 530 NMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDG 589
Query: 187 VNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRY 246
VNDAPALK ADIGIA+ T+ A+ ASD+VL + S I+SAV R+I+ MK + Y
Sbjct: 590 VNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 648
Query: 247 MISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRR 306
+S I V AL +L + ++ DG + + P
Sbjct: 649 AVSITIRIVFGFML-IALIWEFDFSAFMVLIIAILNDG-TIMTISKDRVKPSPT---PDS 703
Query: 307 SDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWG 366
I A +V+G Y I TV F + F
Sbjct: 704 WKLKEIFATG----VVLGGYQAIMTVIFFWAAHKTDFF---------------------- 737
Query: 367 QCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSED 426
F V N + M + I S
Sbjct: 738 ----SDTFGVRSIRDNNH-----------------ELMGAVYLQVSIISQALIFVTRSRS 776
Query: 427 GSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVL 486
S + P L++A ++ + ++ V + I + + ++ +
Sbjct: 777 WSFVERP---GALLMIAFLIAQLI-ATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYF 832
Query: 487 IDEVLKFVGRC 497
+V KF R
Sbjct: 833 PLDVFKFAIRY 843
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 341 bits (877), Expect = e-108
Identities = 82/487 (16%), Positives = 165/487 (33%), Gaps = 96/487 (19%)
Query: 8 VVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYA 67
P+ + + + E +T R LG A K
Sbjct: 487 DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------------------------- 520
Query: 68 SMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN 127
E +G++ DPPR++ ++ + + + G+ + ++TGD A R++G+
Sbjct: 521 --EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGT-- 576
Query: 128 EDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGV 187
+ + L +M + + F+ P+HK +V +L++ G +VAMTGDGV
Sbjct: 577 NIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGV 636
Query: 188 NDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYM 247
NDAP+LK AD GIA+ ++ A+ A+D+V I+ A+ R I++ M A++ Y
Sbjct: 637 NDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYR 695
Query: 248 ISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRS 307
I+ +I + L ++++ + D A+ ++
Sbjct: 696 IALSIHLE-IFLGLWIAILNRSLNIELVVFIAIFADV-ATLAIAYDNAPYSQTPVKWNLP 753
Query: 308 DDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQ 367
+ +++G+ + + T Y G GI N+G
Sbjct: 754 K-------LWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQ--------------NFGN 792
Query: 368 CPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDG 427
+ + E + +
Sbjct: 793 -----------------------------------MDEVLFLQISLTENWLIFITRANGP 817
Query: 428 SLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLI 487
++P + L A+ + L + F S + + +F + I
Sbjct: 818 FWSSIP---SWQLSGAIFLVDILATCFTIWGW----FEHSDTSIVAVVRIWIFSFGIFCI 870
Query: 488 DEVLKFV 494
+ ++
Sbjct: 871 MGGVYYI 877
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 3e-40
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS 134
+ + D PR + +E + G+++++++GD ++ + + +E+ + E
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEY-------- 178
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
+ P K I+ LK++G V M GDGVNDA A
Sbjct: 179 -------------------------YSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241
L LAD+ +AMG G +++K +D++L +D T++ + + + N +
Sbjct: 214 LALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 5e-39
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 42/179 (23%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS 134
G++ L D R E +AI +A GI+ M++TGDN+ A+ + E+G+
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL----------- 183
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
++ AE P K E V+ +++ V AM GDGVNDAPA
Sbjct: 184 ---DDYF-------------------AEVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPA 220
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK-----AFIRY 246
L AD+GIA+G AGT+VA E +D+VL +D + + V R Y+ + ++
Sbjct: 221 LAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHPQF 278
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 132 bits (336), Expect = 2e-35
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 37/169 (21%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS 134
G++ + D + A+++ + GI+V +ITGDN +AEAI RE+ + + +
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----DLV---- 205
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
AE P K E V+ L+ VVA GDG+NDAPA
Sbjct: 206 -------------------------IAEVLPHQKSEEVKKLQAKE-VVAFVGDGINDAPA 239
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241
L AD+GIA+G +G++VA E+ D+VL DD +V+A+ R + +K
Sbjct: 240 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-34
Identities = 61/177 (34%), Positives = 87/177 (49%), Gaps = 41/177 (23%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS 134
V L+ + DP ++ + I + + +GI ++++TGD+K TAEA+ +G+
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI----------- 593
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
K+ AE P K IV LK+ G +VAM GDGVNDAPA
Sbjct: 594 ---KKV-------------------VAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPA 631
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK-----AFI 244
L ADIGIAMG GT+VA E++ + L D I A S +N++ AFI
Sbjct: 632 LAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFI 687
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 8e-33
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 42/177 (23%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS 134
G++ + D + A+++ + GI+V +ITGDN +AEAI RE+ +
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 496
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
AE P K E V+ L+ VVA GDG+NDAPA
Sbjct: 497 ---DLV-------------------IAEVLPHQKSEEVKKLQAKE-VVAFVGDGINDAPA 533
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK-----AFI 244
L AD+GIA+G +G++VA E+ D+VL DD +V+A+ R + +K A I
Sbjct: 534 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 589
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-32
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 42/177 (23%)
Query: 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKS 134
G++ + D + A+++ + GI+V +ITGDN +AEAI RE+ +
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLV-------- 577
Query: 135 LTGKEFMEMHDKKAHLRQSGGLLFSRAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
AE P K E V+ L+ VVA GDG+NDAPA
Sbjct: 578 -------------------------IAEVLPHQKSEEVKKLQAKE-VVAFVGDGINDAPA 611
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK-----AFI 244
L AD+GIA+G +G++VA E+ D+VL DD +V+A+ R + +K A I
Sbjct: 612 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 667
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 3e-14
Identities = 18/85 (21%), Positives = 25/85 (29%), Gaps = 17/85 (20%)
Query: 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLN 62
+G +VPLD I ++ LR + A K LP E D
Sbjct: 101 RHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATK-YLPAREGDYQRAD--------- 150
Query: 63 PSNYASMECGLTFVGLVGLRDPPRN 87
E L G + D +
Sbjct: 151 -------ESDLILEGYIAFLDHHHH 168
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 2e-10
Identities = 29/151 (19%), Positives = 45/151 (29%), Gaps = 16/151 (10%)
Query: 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFE---CNE-DISLKSLTGKE 139
R + + I VI+G + I + CN +
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 140 FMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199
H K G K ++ L E + + M GD V D A KL+D+
Sbjct: 137 ---PHSCKGTCSNQCGCC--------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 185
Query: 200 IAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230
A E ++ + L DF I +
Sbjct: 186 FARDYLLNECREQNLN-HLPYQDFYEIRKEI 215
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 4e-07
Identities = 27/140 (19%), Positives = 43/140 (30%), Gaps = 24/140 (17%)
Query: 93 IEDCRAAGIRVMVITGDNKNTAEAICREIGVFE--CNE-DISLKSLTGK---EFMEMHDK 146
+ + +V+ +G + + N + +L G M H K
Sbjct: 84 VSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSK 143
Query: 147 KAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAG 206
L + RLL + GDG ND K A I IA
Sbjct: 144 GEMLL----------------VLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFN--A 185
Query: 207 TEVAKEASDMVLADDDFSTI 226
EV K+ + + + D + I
Sbjct: 186 KEVLKQHATHCINEPDLALI 205
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 2e-06
Identities = 76/471 (16%), Positives = 135/471 (28%), Gaps = 159/471 (33%)
Query: 24 HEM--STGALRCLGFAYKDELPDFET-----YDGN--EDHPAHTL-------LLNPSNYA 67
H M TG + + YKD L FE +D +D P L ++ +
Sbjct: 5 HHMDFETGEHQ---YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 68 SMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKN---TAEAICREIGVF 124
S T L V + +E+ N I +
Sbjct: 62 SG----TLRLFWTLLSKQEEMVQKFVEE------------VLRINYKFLMSPI-KT---- 100
Query: 125 ECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLF-----SRAEPRHK-QEIVRLLKEDGE 178
E + S+ + ++E D+ + +F SR +P K ++ + L+
Sbjct: 101 EQRQ----PSMMTRMYIEQRDR----LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152
Query: 179 VV--AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSI 236
V+ + G G K T VA + V
Sbjct: 153 VLIDGVLGSG-------K------------TWVALD----VCLSYKVQC----------- 178
Query: 237 YNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLI-PVQLLWVNLVTDGPPATALGFNPP 295
+ K F ++ N+ S PE ++ +Q L + + + N
Sbjct: 179 KMDFKIF--WL---NLKNCNS---------PETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224
Query: 296 D---------KDIMKKPPRRSDDSLI------SAWIL--F----RYLVIGLYVGIATVGV 334
+ ++K P + L+ +A F + L+ + + +
Sbjct: 225 LRIHSIQAELRRLLKSKPYE--NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF-L 281
Query: 335 FIIWYTHGSFLGINLIGDGHSLV---TYSQLTNWGQC-----PSWGNFTVSPFTAGNQVF 386
TH I+L +L S L + C P T +P +
Sbjct: 282 SAATTTH-----ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL-TTNPRRLS--II 333
Query: 387 --TFNDNPC--DYF-HGGKVK---AMTLSLSVLVAIEM---FNSLNALSED 426
+ D D + H K + SL+VL E F+ L+
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 5e-04
Identities = 36/265 (13%), Positives = 69/265 (26%), Gaps = 96/265 (36%)
Query: 78 LVGLRDPPRNEVHQAIE-DCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLT 136
LV L + + A C+ +++ T K + + + S +LT
Sbjct: 248 LV-LLNVQNAKAWNAFNLSCK-----ILLTTRF-KQVTDFLSAATTTHISLDHHS-MTLT 299
Query: 137 GKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL--- 193
E + K R PR +++ + + D A
Sbjct: 300 PDEVKSLLLKYLDCRPQ-------DLPREVLTTNPR------RLSIIAESIRDGLATWDN 346
Query: 194 -------KLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRY 246
KL I I + VL ++ R +++ +
Sbjct: 347 WKHVNCDKLTTI-IESSLN-----------VLEPAEY----------RKMFDRL------ 378
Query: 247 MISSNIGEVASIFFTAALGIPEGL-IPVQLL---WVNLVTDGPPATALGFNPPDKDIMKK 302
S+F P IP LL W +++ ++ K
Sbjct: 379 ----------SVF-------PPSAHIPTILLSLIWFDVIKSDVM-----------VVVNK 410
Query: 303 PPRRSDDSLISAWIL-FRYLVIGLY 326
+ SL+ + +Y
Sbjct: 411 LHKY---SLVEKQPKESTISIPSIY 432
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 3e-06
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 28/159 (17%)
Query: 85 PRNEVHQAIEDCRAAGIRVMVITGDN------KNTAEAICREIGVFECNEDISLKSLTGK 138
P+ EV C G+ + + N + I + +S + + K
Sbjct: 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNK 145
Query: 139 E------FMEMHDKKAHLRQSGGLLFSRAEPR---------HKQE-IVRLLKEDG----E 178
E F+ ++K L R P KQ+ I +++ G E
Sbjct: 146 EVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEE 205
Query: 179 VVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
++ GDG ND L+ A IG+AMG A +V K A+D V
Sbjct: 206 TMSF-GDGGNDISMLRHAAIGVAMGQAKEDV-KAAADYV 242
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 3e-06
Identities = 37/192 (19%), Positives = 65/192 (33%), Gaps = 59/192 (30%)
Query: 88 EVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG------------VFECNEDISLKSL 135
+ +AI + GI +M++TG+ AEA IG + + I L S+
Sbjct: 24 KALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM 83
Query: 136 TGKE--FMEMHDKKAHLRQSGGLLFSRA------EPRHKQEIVRLLKEDG---------- 177
+ + E+ + + R S + RA E + + + ++ E
Sbjct: 84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGF 143
Query: 178 ---------------------------EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVA 210
EV + GDG ND A K+ +A+ A +
Sbjct: 144 AIHVKKPWINKGSGIEKASEFLGIKPKEVAHV-GDGENDLDAFKVVGYKVAVAQAPKIL- 201
Query: 211 KEASDMVLADDD 222
KE +D V +
Sbjct: 202 KENADYVTKKEY 213
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 4e-06
Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 59/191 (30%)
Query: 88 EVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG------------VFECNEDIS--LK 133
+ ++I G+ V +++G+ A+ +G +F+ + I
Sbjct: 26 KAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFS 85
Query: 134 SLTGKEFMEMHDKKAHLRQS-------GGLLFSRAEPRHKQEIVRLLKEDG--------- 177
+ +F+E K+ +R F +P + + + G
Sbjct: 86 NEGTNKFLEEMSKRTSMRSILTNRWREASTGFDI-DPEDVDYVRKEAESRGFVIFYSGYS 144
Query: 178 --------------------------EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAK 211
E++ + GD ND P +L A T+ K
Sbjct: 145 WHLMNRGEDKAFAVNKLKEMYSLEYDEILVI-GDSNNDMPMFQLPVRKACPANA-TDNIK 202
Query: 212 EASDMVLADDD 222
SD V
Sbjct: 203 AVSDFVSDYSY 213
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 4e-06
Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 28/142 (19%)
Query: 93 IEDCRAAGIRVMVITGDNKNTAEAICREIGVFE--CNE-DISLKSLTGKEFMEMHDKKAH 149
+ A G +V + +G ++ + ++ + N +I LTG+ E+ +
Sbjct: 187 VATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQT- 245
Query: 150 LRQSGGLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGVNDAPALKLADIGIAMGI 204
K +I+ L + VA+ GDG ND + A +G+A
Sbjct: 246 ----------------KADILLTLAQQYDVEIHNTVAV-GDGANDLVMMAAAGLGVAYH- 287
Query: 205 AGTEVAKEASDMVLADDDFSTI 226
+ + + +
Sbjct: 288 -AKPKVEAKAQTAVRFAGLGGV 308
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 6e-06
Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 24/149 (16%)
Query: 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFE--CNE-DISLKSLTGKEF 140
+ + +A G + +I+G + + + N +I LT
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNIT 238
Query: 141 MEMHD---KKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 197
+ + + KK L ++ L E + GDG ND P L+ A
Sbjct: 239 LPIMNAANKKQTLV----------------DLAARLNIATENIIACGDGANDLPMLEHAG 282
Query: 198 IGIAMGIAGTEVAKEASDMVLADDDFSTI 226
GIA V +E + F +
Sbjct: 283 TGIAWK--AKPVVREKIHHQINYHGFELL 309
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 9e-06
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
+V A GDG+ND L G+AMG A EV K +D V
Sbjct: 201 DVYAF-GDGLNDIEMLSFVGTGVAMGNAHEEV-KRVADFV 238
|
| >2voy_D Sarcoplasmic/endoplasmic reticulum calcium ATPase 1; hydrolasep-type ATPase, cryo-EM, helical reconstruction, membrane protein; 17.50A {Oryctolagus cuniculus} Length = 26 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 2e-05
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 315 WILFRYLVIGLYVGIATVGVF 335
W+ FRY+ IG YVG ATVG
Sbjct: 1 WLFFRYMAIGGYVGAATVGAA 21
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 3e-05
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
E++A GDG ND P LK A IG+AMG A +V + +D V
Sbjct: 212 EIMAC-GDGGNDIPMLKAAGIGVAMGNASEKV-QSVADFV 249
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 24/163 (14%)
Query: 79 VGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFE--CNE-DISLKSL 135
V + + R G V++G + E + E+ + NE +I +L
Sbjct: 251 VAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTL 310
Query: 136 TGK---EFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
TG+ ++ K LR E + GDG ND
Sbjct: 311 TGRVVGPIIDRAGKATALR----------------EFAQRAGVPMAQTVAVGDGANDIDM 354
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRS 235
L A +GIA +E +D L+ T++ +G R
Sbjct: 355 LAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRG 395
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 5e-05
Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 28/142 (19%)
Query: 93 IEDCRAAGIRVMVITGDNKNTAEAICREIGVFE--CNE-DISLKSLTGKEFMEMHDKKAH 149
I++ + G V V++G I ++G+ N + LTG E+ + A
Sbjct: 85 IKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENA- 143
Query: 150 LRQSGGLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGVNDAPALKLADIGIAMGI 204
K EI+ + + + VA+ GDG ND K A + IA
Sbjct: 144 ----------------KGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAGLKIAFC- 185
Query: 205 AGTEVAKEASDMVLADDDFSTI 226
+ KE +D+ + D I
Sbjct: 186 -AKPILKEKADICIEKRDLREI 206
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} Length = 274 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
E + GDG ND + +D+ IAM + ++ K+ + +
Sbjct: 218 ETICF-GDGQNDIVMFQASDVTIAMKNSHQQL-KDIATSI 255
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 166 KQEIVRLLKED---GEVVAMTGDGVNDAPALKLADIGIAMG--IAGTEVAKEASDMVLAD 220
K ++++LLKE +++ + GDG D A AD I G + +V A +
Sbjct: 158 KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDF 216
Query: 221 DDF 223
+
Sbjct: 217 VEL 219
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 16/94 (17%)
Query: 138 KEFMEMHDKKAHLRQSGGLLFSRAEPR---------HKQEIVRLLKE-----DGEVVAMT 183
++ E + ++ + L + K EIV + E +A
Sbjct: 175 EKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAF- 233
Query: 184 GDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
GD ND L+ G + A E K +++
Sbjct: 234 GDSGNDVRMLQTVGNGYLLKNATQEA-KNLHNLI 266
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 25/127 (19%)
Query: 99 AGIRVMVITGDNKNTAEAICREIGVFE--CNE-DISLKSLTGKEFMEMHDKKAHLRQSGG 155
+V++++ ++ + R++G C++ +I + D K
Sbjct: 83 ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPK-------- 134
Query: 156 LLFSRAEPRHKQEIVRLLKEDGE-VVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEAS 214
++ V K V+A GD ND L A GI A V +E
Sbjct: 135 -----------RQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGILFH-APENVIREFP 181
Query: 215 DMVLADD 221
Sbjct: 182 QFPAVHT 188
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
+V+ + GD ND +K A +G+AMG A EV KEA+ V +
Sbjct: 215 DVMTL-GDQGNDLTMIKYAGLGVAMGNAIDEV-KEAAQAVTLTNA 257
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
+V+ + GD ND L A+ A K + VL
Sbjct: 242 QVLVV-GDAENDIAMLSNFKYSFAVANATDSA-KSHAKCVLPVSH 284
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 4e-04
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 36/130 (27%)
Query: 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151
I + I V +ITG E C +G+ + +K
Sbjct: 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL-------------YQGQSNKLIAFS 107
Query: 152 QSGGLLFSRAEPRHKQEIVRLLKEDG---EVVAMTGDGVNDAPALKLADIGIAMGIAGTE 208
LL++ E VA GD + D P ++ + +A+ A
Sbjct: 108 D-------------------LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPL 148
Query: 209 VAKEASDMVL 218
+ +D V
Sbjct: 149 L-IPRADYVT 157
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 40.1 bits (95), Expect = 5e-04
Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 37/130 (28%)
Query: 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151
I + +GI V +I+ + ++ K + + DK A +
Sbjct: 44 GISLLKKSGIEVRLISERACSKQTLSALKLDC--------------KTEVSVSDKLATVD 89
Query: 152 QSGGLLFSRAEPRHKQEIVRLLKEDG---EVVAMTGDGVNDAPALKLADIGIAMGIAGTE 208
+ KE G + VA G+ V+D LK + A +
Sbjct: 90 E-------------------WRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSG 130
Query: 209 VAKEASDMVL 218
++A +
Sbjct: 131 A-QKAVGYIC 139
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 6e-04
Identities = 26/127 (20%), Positives = 40/127 (31%), Gaps = 30/127 (23%)
Query: 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151
I GI V ++TG+ ++ V F + DK +
Sbjct: 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL-------------FQGVVDKLSAA- 84
Query: 152 QSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAK 211
+E+ L + E VA GD +NDA LK I A + +
Sbjct: 85 ---------------EELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYI-R 128
Query: 212 EASDMVL 218
S + L
Sbjct: 129 RLSTIFL 135
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A Length = 279 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 6e-04
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
EV+A+ GDG ND +K A +G+AMG A V K+A+D +
Sbjct: 215 EVIAI-GDGYNDLSMIKFAGMGVAMGNAQEPV-KKAADYI 252
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 6e-04
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
E++A+ GD ND ++ A +G+A+ A V KE ++ V +
Sbjct: 216 EIMAI-GDQENDIAMIEYAGVGVAVDNAIPSV-KEVANFVTKSNL 258
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} Length = 290 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 7e-04
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
+VVA+ G +D P ++LA +G+AMG A E+ K +D V
Sbjct: 220 DVVAI-GHQYDDLPMIELAGLGVAMGNAVPEI-KRKADWV 257
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 7e-04
Identities = 22/130 (16%), Positives = 35/130 (26%), Gaps = 36/130 (27%)
Query: 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151
I + I V +ITG E +G+ + DK
Sbjct: 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHL-------------YQGQSDKLVAYH 130
Query: 152 QSGGLLFSRAEPRHKQEIVRLLKEDG---EVVAMTGDGVNDAPALKLADIGIAMGIAGTE 208
+ LL E VA GD + D P + + +A+ A
Sbjct: 131 E-------------------LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPL 171
Query: 209 VAKEASDMVL 218
+ + V
Sbjct: 172 L-LPKAHYVT 180
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 8e-04
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
E+V GD ND + A + +AM A +V KEASD+V
Sbjct: 208 EIVVF-GDNENDLFMFEEAGLRVAMENAIEKV-KEASDIV 245
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 8e-04
Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 167 QEIVRLLKEDGEVVAMT-GDGVNDAPALKLADIGIAMGIAGTEVAKEASD 215
+ ++ K G++ + GD ND P ++ D +G + A+ S
Sbjct: 185 KILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSS 234
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 9e-04
Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 37/130 (28%)
Query: 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151
I R +G+ +++++ + A R++ + + K L+
Sbjct: 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKI--------------PVLHGIDRKDLALK 92
Query: 152 QSGGLLFSRAEPRHKQEIVRLLKEDG---EVVAMTGDGVNDAPALKLADIGIAMGIAGTE 208
Q +E G E V G+ VND P L +A+ A
Sbjct: 93 Q-------------------WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDV 133
Query: 209 VAKEASDMVL 218
V + A+ V
Sbjct: 134 V-RGAARAVT 142
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 514 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 99.97 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 99.96 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 99.96 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.71 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.7 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.52 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.65 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.65 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.64 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.64 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.62 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.6 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.58 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.58 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.58 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.57 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.55 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.55 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.54 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.49 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.47 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.45 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.43 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.43 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.42 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.42 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.41 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.41 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.41 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.38 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.36 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.34 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.34 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.3 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.28 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.26 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.25 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.24 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.24 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.23 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.23 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.21 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.18 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.15 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.13 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.12 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.1 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.1 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.09 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.09 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.06 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.02 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.01 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.99 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.98 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.98 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.97 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.91 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.9 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.89 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.88 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.88 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.84 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.84 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.83 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.83 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.82 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.82 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.8 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.8 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.77 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.75 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.75 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.74 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.74 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.73 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.73 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.73 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.73 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.72 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 98.72 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.72 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.72 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.71 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.71 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.71 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.71 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.71 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.7 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.69 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.69 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.68 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.65 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.64 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.63 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.59 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.57 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.56 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.56 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.55 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.55 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.54 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.54 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.54 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.53 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.51 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.51 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.49 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.47 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.44 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 98.43 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.41 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 98.4 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.38 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.33 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 98.32 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 98.32 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 98.25 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 98.21 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 98.21 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.2 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 98.16 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 98.1 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 98.1 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 98.05 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 98.01 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 97.9 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.89 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 97.87 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 97.79 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 97.76 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 97.76 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 97.75 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.68 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 97.65 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 97.64 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.5 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.37 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 96.96 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.91 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 96.82 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 96.79 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.59 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.53 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 96.51 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 95.9 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 95.81 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 95.16 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 94.86 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.54 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 93.83 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 91.62 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 91.53 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 91.31 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 83.36 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 83.06 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-67 Score=588.08 Aligned_cols=474 Identities=30% Similarity=0.478 Sum_probs=389.3
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEeccc
Q 010234 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLR 82 (514)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 82 (514)
..+|+..+++++.++.+.+.+++|+++|+||+++|||.++++++..... .+.++.+.+|+|++|+|+++++
T Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~---------~~~~~~~~~e~~l~~lGlv~i~ 602 (1034)
T 3ixz_A 532 LIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYA---------FDVEAMNFPTSGLSFAGLVSMI 602 (1034)
T ss_pred hcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccc---------cchhhhhccccCcEEEEEEecc
Confidence 3578888999999999999999999999999999999987654332211 1123345678999999999999
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcc--------------------ceecccChHHHhh
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNED--------------------ISLKSLTGKEFME 142 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~ 142 (514)
|++|++++++|++|+++||+++|+|||+..++.++++++|+...+.. .....+++.++..
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 99999999999999999999999999999999999999999654321 1122445555555
Q ss_pred hhHHHH--HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccC
Q 010234 143 MHDKKA--HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLAD 220 (514)
Q Consensus 143 ~~~~~~--~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~ 220 (514)
+.+.+. ........+++|.+|++|.++++.++..++.|+|+|||.||++||+.||+|||||.++++.+|++||+|+.+
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~ 762 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLD 762 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEecc
Confidence 443332 222334569999999999999999999999999999999999999999999999988999999999999999
Q ss_pred CCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCcccc
Q 010234 221 DDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIM 300 (514)
Q Consensus 221 ~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im 300 (514)
+++++++.++++||++|+|+++++.|.+++|+..++..+++.+++.+.|+++.|++|+|++++++|+++++++|+++++|
T Consensus 763 ~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m 842 (1034)
T 3ixz_A 763 DNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIM 842 (1034)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC-CCCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCC
Q 010234 301 KKPPRRS-DDSLISAWILFRY-LVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSP 378 (514)
Q Consensus 301 ~~~P~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (514)
++||+++ .+++++++.+++. +..|++.++.+++.|++.+....+.+... .+....|.+...+.
T Consensus 843 ~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~---------------~~~~~~~~~~~~~~ 907 (1034)
T 3ixz_A 843 HLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLC---------------VGLRPQWENHHLQD 907 (1034)
T ss_pred hCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc---------------cccccccccccccc
Confidence 9999987 6889998877764 45688888877777765553322221110 01111121111110
Q ss_pred Cc-CCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhc
Q 010234 379 FT-AGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYV 457 (514)
Q Consensus 379 ~~-~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~i 457 (514)
.. ..++.+++..+. .....++|++|.+++++|+++.+++|+++.++|+.++++|++++++++++++++++++|+
T Consensus 908 ~~~~~~~~~~~~~~~-----~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~ 982 (1034)
T 3ixz_A 908 LQDSYGQEWTFGQRL-----YQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYC 982 (1034)
T ss_pred cccccccccchhhhh-----hhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 00 001111110000 011347899999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccc
Q 010234 458 PFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGRCTNGSQTSR 505 (514)
Q Consensus 458 p~~~~~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K~~~r~~~~~~~~~ 505 (514)
|+++.+|++.|+++.+|+++++++++.++++|++|++.|+.++.|..|
T Consensus 983 p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~~~~ 1030 (1034)
T 3ixz_A 983 PGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSWWDQ 1030 (1034)
T ss_pred hhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhh
Confidence 999999999999999999999999999999999999999999888765
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-62 Score=550.41 Aligned_cols=460 Identities=55% Similarity=0.893 Sum_probs=383.2
Q ss_pred CCceeeCCHHHHHHHHHHHHHH--hhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEeccc
Q 010234 5 DGSVVPLDHKSRNLILDALHEM--STGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLR 82 (514)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 82 (514)
+++..+++++.++.+.+++++| +++|+||+++|||+++.++.. ....+...++.+|+|++|+|+++++
T Consensus 532 ~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~----------~~~~~~~~~~~~e~~l~~lG~~~i~ 601 (995)
T 3ar4_A 532 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREE----------MVLDDSSRFMEYETDLTFVGVVGML 601 (995)
T ss_dssp TTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGG----------CCTTCGGGHHHHTCSEEEEEEEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccc----------cccccchhhhhhccCcEEEEEEeec
Confidence 4567789999999999999999 999999999999987543211 1112234467789999999999999
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
|+++|+++++|++|+++||+++|+|||+..+|.++|+++|+...+..+....++|+++..+.++.......+..+++|++
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 99999999999999999999999999999999999999999765433333466777777766544333334578999999
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKA 242 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~ 242 (514)
|++|.++++.++..++.|+|+|||.||++||++||+||||| ++++.+|++||+++.++++.++.+++++||++|.|+++
T Consensus 682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k 760 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQ 760 (995)
T ss_dssp SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHH
Q 010234 243 FIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLV 322 (514)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~ 322 (514)
++.|.+++|+..++..+++.+++.+.|+++.|++|+|++++.+|+++++++++++++|++||+.+++++++++.++++++
T Consensus 761 ~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~ 840 (995)
T 3ar4_A 761 FIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMA 840 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHH
Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchh
Q 010234 323 IGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVK 402 (514)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (514)
.|+++++.+++.+++++... . +.......++.++..|... +..+. ...+..+ ....
T Consensus 841 ~g~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~~~~--~~~~ 896 (995)
T 3ar4_A 841 IGGYVGAATVGAAAWWFMYA---E------DGPGVTYHQLTHFMQCTED-----------HPHFE--GLDCEIF--EAPE 896 (995)
T ss_dssp HHHHHHHHHHHHHHHHTSSC---S------SSCCCTTCCGGGCSSCSSC-----------CSCCS--CSCCCGG--GCHH
T ss_pred HHHHHHHHHHHHHHHHHHhc---c------cccccccchhccccccccc-----------ccccc--ccccccc--cchh
Confidence 99999888766555433110 0 0000000011111222100 00000 0011111 1135
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHH
Q 010234 403 AMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAF 482 (514)
Q Consensus 403 ~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~~ 482 (514)
++|++|.+++++|+++.+++|+++.++|+.++|+|++++++++++++++++++|+|+++.+|++.++++.+|++++++++
T Consensus 897 ~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 976 (995)
T 3ar4_A 897 PMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISL 976 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHH
Confidence 89999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccC
Q 010234 483 PVVLIDEVLKFVGRCTN 499 (514)
Q Consensus 483 ~~~l~~e~~K~~~r~~~ 499 (514)
+.++++|++|++.|+++
T Consensus 977 ~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 977 PVIGLDEILKFIARNYL 993 (995)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhhcCC
Confidence 99999999999988653
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-62 Score=549.93 Aligned_cols=472 Identities=29% Similarity=0.474 Sum_probs=379.9
Q ss_pred cCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccC
Q 010234 4 LDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRD 83 (514)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~ 83 (514)
.+|+..+++++.++++.+.+++|+++|+||+++|||+++++++....+ .+.+..+.+|+|++|+|+++++|
T Consensus 528 ~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~---------~~~~~~~~~e~~l~~lG~i~i~D 598 (1028)
T 2zxe_A 528 LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYP---------FDADEPNFPTTDLCFVGLMAMID 598 (1028)
T ss_dssp BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCC---------CCTTTTCSCCSSEEEEEEEEEEC
T ss_pred cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc---------cchhhhhhhhcCeEEEeeeccCC
Confidence 567888999999999999999999999999999999987654322111 11223345689999999999999
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccc--------------------eecccChHHHhhh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDI--------------------SLKSLTGKEFMEM 143 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~~~ 143 (514)
++||+++++|++|+++||+++|+|||+..+|..+|+++|+...+... ....++|+++..+
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 99999999999999999999999999999999999999997543211 1234556666555
Q ss_pred hHHHH--HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCC
Q 010234 144 HDKKA--HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD 221 (514)
Q Consensus 144 ~~~~~--~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~ 221 (514)
.++.. ........+++|++|++|.++++.+++.++.|+|+|||.||++||++||+|||||.++++.+|++||+++.++
T Consensus 679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~ 758 (1028)
T 2zxe_A 679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDD 758 (1028)
T ss_dssp CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTC
T ss_pred CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCC
Confidence 43322 2222334699999999999999999999999999999999999999999999999779999999999999999
Q ss_pred CchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccC
Q 010234 222 DFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMK 301 (514)
Q Consensus 222 ~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~ 301 (514)
+++++.+++++||++++|+++++.|.+++|+..++..+++.+++.+.|++++|++|+|++++.+|+++++++++++++|+
T Consensus 759 ~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~ 838 (1028)
T 2zxe_A 759 NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMK 838 (1028)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC-CCCcHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCC
Q 010234 302 KPPRRSDD-SLISAWILFR-YLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPF 379 (514)
Q Consensus 302 ~~P~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (514)
+||++++. ++++++.+++ ++..|+++++++++.|++.+....+.+....+-. ..|.....+..
T Consensus 839 ~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------------~~~~~~~~~~~ 903 (1028)
T 2zxe_A 839 RQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKR---------------VRWDDRWISDV 903 (1028)
T ss_dssp SCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCH---------------HHHSCTTCCCE
T ss_pred cCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhccc---------------chhcccccccc
Confidence 99998766 9999988776 4567888888887766654432111100000000 00000000000
Q ss_pred c-CCCcccccCCCCCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhcc
Q 010234 380 T-AGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVP 458 (514)
Q Consensus 380 ~-~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip 458 (514)
. ..+..++. +........++|++|.+++++|+++.+++|+++.++|+.+ ++|++++++++++++++++++|+|
T Consensus 904 ~~~~~~~~~~-----~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~-~~n~~l~~~~~~~~~l~~~~~~~p 977 (1028)
T 2zxe_A 904 EDSFGQQWTY-----EQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQG-MKNKILIFGLFEETALAAFLSYCP 977 (1028)
T ss_dssp ECTTSCEECH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHC-SCCHHHHHHHHHHHHHHHHHHHST
T ss_pred ccccccccch-----hhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccC-CcCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 00000000 0000001257999999999999999999999988888876 899999999999999999999999
Q ss_pred ccccccccccCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccc
Q 010234 459 FLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEVLKFVGRCTNGSQTSR 505 (514)
Q Consensus 459 ~~~~~f~~~~l~~~~w~~~l~~~~~~~l~~e~~K~~~r~~~~~~~~~ 505 (514)
+++.+|++.|+++.+|++++++++..++++|++|++.|+...+|..|
T Consensus 978 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~~~~~~ 1024 (1028)
T 2zxe_A 978 GTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRSPGGWVEQ 1024 (1028)
T ss_dssp THHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHCTTSHHHH
T ss_pred hHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCcchhHh
Confidence 99999999999999999999999999999999999999887777654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=450.35 Aligned_cols=393 Identities=21% Similarity=0.283 Sum_probs=307.1
Q ss_pred eeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChh
Q 010234 9 VPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNE 88 (514)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~ 88 (514)
.+++++.++.+.+.+++|+++|+||+++|||.. |++++|+|+++++|++||+
T Consensus 488 ~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~----------------------------e~~l~~lGli~i~Dp~R~e 539 (920)
T 1mhs_A 488 HPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG----------------------------EGSWEILGIMPCMDPPRHD 539 (920)
T ss_dssp SCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS----------------------------SCSCCCCBBCCCCCCCCHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc----------------------------ccccEEEEEEEEecccccc
Confidence 357888899999999999999999999998841 4678999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHH
Q 010234 89 VHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQE 168 (514)
Q Consensus 89 ~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~ 168 (514)
++++|++|+++||+++|+|||+..+|.++|+++|+......-....++|. ..+.+++......+..+++|.+|++|.+
T Consensus 540 a~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~ 617 (920)
T 1mhs_A 540 TYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYN 617 (920)
T ss_dssp HHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHH
T ss_pred HHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHH
Confidence 99999999999999999999999999999999999642100001122222 1111111111223456899999999999
Q ss_pred HHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHH
Q 010234 169 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMI 248 (514)
Q Consensus 169 iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~ 248 (514)
+++.++..++.|+|+|||.||+|||++||+||||| ++++.+|++||+++.++++.++.+++++||++|+|+++++.|.+
T Consensus 618 iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l 696 (920)
T 1mhs_A 618 VVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRI 696 (920)
T ss_dssp HHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 010234 249 SSNIGEVASI-FFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLYV 327 (514)
Q Consensus 249 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~~~~~ 327 (514)
+.|+...... ++..+++.+ +++.+++|+|++.+. |++++++++++++ ++|++++.+.+ ++..++.|++.
T Consensus 697 ~~n~~~~~~~~~~~~~~~~~--l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~~~----~~~~~~~g~~~ 766 (920)
T 1mhs_A 697 ALSIHLEIFLGLWIAILNRS--LNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPKL----WGMSVLLGVVL 766 (920)
T ss_dssp HHHHHHHHHHHHHHHSCSCC--CCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSSSC----SSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHHHH----HHHHHHHHHHH
Confidence 9999864333 333444443 889999999999997 8999999988764 56666554322 22234566666
Q ss_pred HHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhhHHHH
Q 010234 328 GIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLS 407 (514)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 407 (514)
++.+++.|.+.+.. +. ..+ +.......+|++
T Consensus 767 ~~~~~~~~~~~~~~----~~---~~~------------------------------------------~~~~~~~~~T~~ 797 (920)
T 1mhs_A 767 AVGTWITVTTMYAQ----GE---NGG------------------------------------------IVQNFGNMDEVL 797 (920)
T ss_dssp HHHHHHHHHHHTTT----TT---TCC------------------------------------------SSSSSSSHHHHH
T ss_pred HHHHHHHHHHHHHh----cc---ccc------------------------------------------ccchhhHHHHHH
Confidence 65554444332210 00 000 000002378999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHHHHH
Q 010234 408 LSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLI 487 (514)
Q Consensus 408 f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~~~~~l~ 487 (514)
|.+++++|+++.+++|+.+. +|+ + +.|+++++++++..+++..+++.| +|.+.|+++.+|+++++++++.+++
T Consensus 798 f~~lv~~~~~~~~~~R~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~----~f~~~~l~~~~~~~~~~~~~~~~~~ 870 (920)
T 1mhs_A 798 FLQISLTENWLIFITRANGP-FWS-S-IPSWQLSGAIFLVDILATCFTIWG----WFEHSDTSIVAVVRIWIFSFGIFCI 870 (920)
T ss_dssp HHHHHHHHHHHTTSSSCSSS-CSC-C-SCTHHHHHHHHHHHHHHHHHHSSS----STTSCSHHHHTHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHhccchh-hhc-C-chHHHHHHHHHHHHHHHHHHHHhh----hhccCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999987644 443 3 478888888888888887777766 7889999999999999999999999
Q ss_pred HHHHHHHhhcc
Q 010234 488 DEVLKFVGRCT 498 (514)
Q Consensus 488 ~e~~K~~~r~~ 498 (514)
.|+.|++.++.
T Consensus 871 ~e~~k~~~~~~ 881 (920)
T 1mhs_A 871 MGGVYYILQDS 881 (920)
T ss_dssp HHHHHHCCCCC
T ss_pred HHHHHHHHhhh
Confidence 99999877665
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-49 Score=430.29 Aligned_cols=406 Identities=25% Similarity=0.294 Sum_probs=289.5
Q ss_pred HHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHH
Q 010234 13 HKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQA 92 (514)
Q Consensus 13 ~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~ 92 (514)
++.++.+.+.+++++++|+||+++||+++++++ .+..|++++|+|+++++|++||+++++
T Consensus 437 ~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~--------------------~~~~e~~l~~lGli~i~Dp~R~~a~~a 496 (885)
T 3b8c_A 437 NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT--------------------KESPGAPWEFVGLLPLFDPPRHDSAET 496 (885)
T ss_dssp STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS--------------------SSCCCCCCCCCEEEEECCCCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCeEEEEEEecccccc--------------------ccccccCcEEEEEEEeecccchhHHHH
Confidence 345667889999999999999999999875421 134578999999999999999999999
Q ss_pred HHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhh-hhHHHHHHhhcCceEEEecChhhHHHHHH
Q 010234 93 IEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFME-MHDKKAHLRQSGGLLFSRAEPRHKQEIVR 171 (514)
Q Consensus 93 I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~p~~k~~iv~ 171 (514)
|++|+++||+++|+|||+..+|.++|+++|+..+.. ....+.|.+.+. +.+........+..+++|.+|++|.++++
T Consensus 497 I~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~--~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~ 574 (885)
T 3b8c_A 497 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVK 574 (885)
T ss_dssp HHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS--TTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHH
T ss_pred HHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC--CcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHH
Confidence 999999999999999999999999999999964210 011233443332 11111111112356899999999999999
Q ss_pred HHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 010234 172 LLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSN 251 (514)
Q Consensus 172 ~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~ 251 (514)
.++..++.|+|+|||.||+|||++||+||||| ++++.+|++||+++.++++.++.+++++||++++|+++++.|.+++|
T Consensus 575 ~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n 653 (885)
T 3b8c_A 575 KLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 653 (885)
T ss_dssp HHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 010234 252 IGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLYVGIAT 331 (514)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (514)
+..++..+... +..+.+++|.|++|+|++.+..+ ++++.++.++ |++++...+ ...+...++.|++.++.+
T Consensus 654 ~~~~~~~~~~~-~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~------~~~p~~~~~-~~~~~~~~~~g~~~~~~~ 724 (885)
T 3b8c_A 654 IRIVFGFMLIA-LIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKP------SPTPDSWKL-KEIFATGVVLGGYQAIMT 724 (885)
T ss_dssp TTTTSTTHHHH-SSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCC------SSCCCSTTT-TTTTTTHHHHHSSTHHHH
T ss_pred HHHHHHHHHHH-HccCcCcCHHHHHHHHHHHHHHH-HhhcccccCc------ccCCcchhH-HHHHHHHHHHHHHHHHHH
Confidence 87554443333 35567899999999999999875 7888776544 222222222 233344555666665554
Q ss_pred HHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCCCCCccCCcchhh-HHHHHHH
Q 010234 332 VGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKA-MTLSLSV 410 (514)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~~f~~ 410 (514)
++.|++.. ...+.+ .+.+ .++. ....... ++++|.+
T Consensus 725 ~~~~~~~~-~~~~~~-----------------------~~~~--~~~~-----------------~~~~~~~~t~~~~~~ 761 (885)
T 3b8c_A 725 VIFFWAAH-KTDFFS-----------------------DTFG--VRSI-----------------RDNNHELMGAVYLQV 761 (885)
T ss_dssp TTSSSCTT-TTTTTT-----------------------CCCC--SSCC-----------------GGGTHHHHTTTTTTT
T ss_pred HHHHHHHH-HcCccc-----------------------cccC--cccc-----------------cchHHHHHHHHHHHH
Confidence 33322110 000000 0000 0000 0000123 3345556
Q ss_pred HHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCChhhHHHHHHHHHHHHHHHHH
Q 010234 411 LVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEV 490 (514)
Q Consensus 411 lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~~~w~~~l~~~~~~~l~~e~ 490 (514)
+++.|+ +.+++|+++.++++.+ .|++++.+++.+++++++.+|.+ ..++++.++++.+|+++++.+++.+++.|+
T Consensus 762 ~~~~~~-~~~~~Rs~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~ 836 (885)
T 3b8c_A 762 SIISQA-LIFVTRSRSWSFVERP--GALLMIAFLIAQLIATLIAVYAN--WEFAKIRGIGWGWAGVIWLYSIVTYFPLDV 836 (885)
T ss_dssp SSTTGG-GTTCSSSCTTTSTTST--TTTTSGGGSSTTTTTTSSSSSCC--CCSSCCCCCTTTTHHHHHHHTGGGTHHHHH
T ss_pred HHHHHH-HHHHhccCCCCcccCc--cHHHHHHHHHHHHHHHHHHHhcc--ccccccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 667775 6788888776655543 44444444444444444444432 234568999999999999999999999999
Q ss_pred HHHHhhcc
Q 010234 491 LKFVGRCT 498 (514)
Q Consensus 491 ~K~~~r~~ 498 (514)
.|++.|+.
T Consensus 837 ~k~~~~~~ 844 (885)
T 3b8c_A 837 FKFAIRYI 844 (885)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 99987764
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=271.48 Aligned_cols=175 Identities=34% Similarity=0.494 Sum_probs=165.1
Q ss_pred HHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHHH
Q 010234 18 LILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCR 97 (514)
Q Consensus 18 ~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l~ 97 (514)
.+.+..++++.+|+|++++|+. .+++|+++++|+++++++++|++|+
T Consensus 521 ~~~~~~~~~~~~G~~vl~va~d---------------------------------~~~~G~i~i~D~i~~~~~~aI~~L~ 567 (736)
T 3rfu_A 521 PLFEKADELRGKGASVMFMAVD---------------------------------GKTVALLVVEDPIKSSTPETILELQ 567 (736)
T ss_dssp HHHHHHHHHHHTTCEEEEEEET---------------------------------TEEEEEEEEECCBCSSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEEC---------------------------------CEEEEEEEeeccchhhHHHHHHHHH
Confidence 3567788999999999999963 3789999999999999999999999
Q ss_pred HcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhCC
Q 010234 98 AAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDG 177 (514)
Q Consensus 98 ~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~ 177 (514)
++|++++|+|||+..++..+++++|++ .++++..|++|.++++.++..+
T Consensus 568 ~~Gi~v~mlTGd~~~~a~~ia~~lgi~-------------------------------~v~a~~~P~~K~~~v~~l~~~g 616 (736)
T 3rfu_A 568 QSGIEIVMLTGDSKRTAEAVAGTLGIK-------------------------------KVVAEIMPEDKSRIVSELKDKG 616 (736)
T ss_dssp HHTCEEEEECSSCHHHHHHHHHHHTCC-------------------------------CEECSCCHHHHHHHHHHHHHHS
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCC-------------------------------EEEEecCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999995 3788999999999999999999
Q ss_pred CEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH
Q 010234 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVAS 257 (514)
Q Consensus 178 ~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 257 (514)
+.|+|+|||.||++||+.||+||||| ++++.++++||+++.+++++++.++++.||++++++++++.|.+.+|++.+..
T Consensus 617 ~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~ipl 695 (736)
T 3rfu_A 617 LIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPL 695 (736)
T ss_dssp CCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 79999999999999999999999999999999999999999999999987554
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=265.81 Aligned_cols=176 Identities=35% Similarity=0.524 Sum_probs=164.9
Q ss_pred HHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHH
Q 010234 17 NLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDC 96 (514)
Q Consensus 17 ~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l 96 (514)
+.+.+.+++++.+|.|++++|+. ++++|+++++|+++|+++++|++|
T Consensus 501 ~~~~~~~~~~~~~g~~~~~va~~---------------------------------~~~~G~i~i~D~~~~~~~~~i~~l 547 (723)
T 3j09_A 501 NEVELALEKLEREAKTAVIVARN---------------------------------GRVEGIIAVSDTLKESAKPAVQEL 547 (723)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEET---------------------------------TEEEEEEEEECCSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEEEC---------------------------------CEEEEEEeecCCcchhHHHHHHHH
Confidence 45677888999999999999853 478999999999999999999999
Q ss_pred HHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhC
Q 010234 97 RAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKED 176 (514)
Q Consensus 97 ~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~ 176 (514)
+++|++++|+|||+..++..+++++|+. .++++..|++|.++++.++..
T Consensus 548 ~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-------------------------------~~~~~~~P~~K~~~v~~l~~~ 596 (723)
T 3j09_A 548 KRMGIKVGMITGDNWRSAEAISRELNLD-------------------------------LVIAEVLPHQKSEEVKKLQAK 596 (723)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------EEECSCCTTCHHHHHHHHTTT
T ss_pred HHCCCEEEEECCCCHHHHHHHHHHcCCc-------------------------------EEEccCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999994 478999999999999999988
Q ss_pred CCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH
Q 010234 177 GEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVA 256 (514)
Q Consensus 177 ~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 256 (514)
++|+|+|||.||++||+.||+||||| ++++.++++||+++.+++++++.+++++||+.++++++++.|.+.+|++.+.
T Consensus 597 -~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 674 (723)
T 3j09_A 597 -EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIP 674 (723)
T ss_dssp -CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 8899999999999999999999999999999999999999999999998654
Q ss_pred HH
Q 010234 257 SI 258 (514)
Q Consensus 257 ~~ 258 (514)
..
T Consensus 675 ~a 676 (723)
T 3j09_A 675 AA 676 (723)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=261.77 Aligned_cols=175 Identities=35% Similarity=0.529 Sum_probs=164.1
Q ss_pred HHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHH
Q 010234 17 NLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDC 96 (514)
Q Consensus 17 ~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l 96 (514)
+.+.+..++++.+|+|++++|+. ++++|+++++|+++|+++++|++|
T Consensus 423 ~~~~~~~~~~~~~g~~~l~va~~---------------------------------~~~~G~i~~~D~l~~~~~~~i~~L 469 (645)
T 3j08_A 423 NEVELALEKLEREAKTAVIVARN---------------------------------GRVEGIIAVSDTLKESAKPAVQEL 469 (645)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEET---------------------------------TEEEEEEEEECCCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEEEC---------------------------------CEEEEEEEecCCchhHHHHHHHHH
Confidence 45677888999999999999853 478999999999999999999999
Q ss_pred HHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhC
Q 010234 97 RAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKED 176 (514)
Q Consensus 97 ~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~ 176 (514)
+++|++++|+|||+..++..+++++|+. .++++..|++|.++++.++..
T Consensus 470 ~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-------------------------------~~~~~~~P~~K~~~v~~l~~~ 518 (645)
T 3j08_A 470 KRMGIKVGMITGDNWRSAEAISRELNLD-------------------------------LVIAEVLPHQKSEEVKKLQAK 518 (645)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------EEECSCCTTCHHHHHHHHTTT
T ss_pred HHCCCEEEEEeCCCHHHHHHHHHHcCCC-------------------------------EEEEeCCHHhHHHHHHHHhhC
Confidence 9999999999999999999999999994 478899999999999999998
Q ss_pred CCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHH
Q 010234 177 GEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVA 256 (514)
Q Consensus 177 ~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 256 (514)
++|+|+|||.||++|++.||+||||| ++++.++++||+++.+++++++.++++.||+.++++++++.|.+.+|++.+.
T Consensus 519 -~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 596 (645)
T 3j08_A 519 -EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIP 596 (645)
T ss_dssp -CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 8899999999999999999999999999999999999999999999998544
Q ss_pred H
Q 010234 257 S 257 (514)
Q Consensus 257 ~ 257 (514)
.
T Consensus 597 l 597 (645)
T 3j08_A 597 A 597 (645)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-17 Score=157.77 Aligned_cols=146 Identities=38% Similarity=0.584 Sum_probs=119.9
Q ss_pred CCcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHH
Q 010234 71 CGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHL 150 (514)
Q Consensus 71 ~~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (514)
.+..++|.+...+++.|++.++++.|+++|+++.++||++...+..+++.+|+..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------- 185 (280)
T 3skx_A 131 KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD------------------------- 185 (280)
T ss_dssp ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------
T ss_pred ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-------------------------
Confidence 4557889999999999999999999999999999999999999999999999853
Q ss_pred hhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 151 RQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 151 ~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
.+....+.+|...++.+.... ++++|||+.||++|++.||+||+|| ++.+..++.||+++..++.+++.+++
T Consensus 186 ------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 186 ------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp ------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHH
T ss_pred ------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHH
Confidence 344555777888788777655 6799999999999999999999999 56666688999999999999999999
Q ss_pred HHhHhHHHHHHHHHHHHHH
Q 010234 231 GEGRSIYNNMKAFIRYMIS 249 (514)
Q Consensus 231 ~~gr~~~~~i~~~~~~~~~ 249 (514)
+.+|+...++++++.|.+.
T Consensus 258 ~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 258 ELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999998888654
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-16 Score=154.47 Aligned_cols=157 Identities=37% Similarity=0.564 Sum_probs=130.5
Q ss_pred HHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCChhHHHHHHHHHH
Q 010234 19 ILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRA 98 (514)
Q Consensus 19 ~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~~~~~~~I~~l~~ 98 (514)
+.+..+.+..+|.+++++++. ..++|.+..++++.|++.++|+.|++
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d---------------------------------~~~~~~~~~~~~~~~g~~~~l~~L~~ 177 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARN---------------------------------GRVEGIIAVSDTLKESAKPAVQELKR 177 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEET---------------------------------TEEEEEEEEECCBCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEEC---------------------------------CEEEEEEEeccccchhHHHHHHHHHH
Confidence 556677788899999988853 15678888889999999999999999
Q ss_pred cCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHHHHhhCCC
Q 010234 99 AGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGE 178 (514)
Q Consensus 99 ~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~ 178 (514)
+|++++++||++...+..+++.+|+.. .|....|..|...++.++.. +
T Consensus 178 ~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------~f~~i~~~~K~~~~~~l~~~-~ 225 (287)
T 3a1c_A 178 MGIKVGMITGDNWRSAEAISRELNLDL-------------------------------VIAEVLPHQKSEEVKKLQAK-E 225 (287)
T ss_dssp TTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------------EECSCCTTCHHHHHHHHTTT-C
T ss_pred CCCeEEEEeCCCHHHHHHHHHHhCCce-------------------------------eeeecChHHHHHHHHHHhcC-C
Confidence 999999999999999999999999843 33344577899999999998 9
Q ss_pred EEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHH
Q 010234 179 VVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241 (514)
Q Consensus 179 ~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~ 241 (514)
++++|||+.||++|++.||+++++| ++.+..+..||+++.+++..++.++++.+|+++.+++
T Consensus 226 ~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 226 VVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp CEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred eEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999 4555557789999988899999999999999988874
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.4e-18 Score=165.70 Aligned_cols=141 Identities=28% Similarity=0.591 Sum_probs=128.2
Q ss_pred CCcEEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHH
Q 010234 71 CGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHL 150 (514)
Q Consensus 71 ~~l~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (514)
.+-.+.|.+...++++|++.++|+.|+++|++++++||++...+..+++++|+..
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------- 177 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE------------------------- 177 (263)
Confidence 4557899999999999999999999999999999999999999999999999853
Q ss_pred hhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 151 RQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 151 ~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+|....|+.|.++++.++..+++++|||||.||+++++.||+|++|| ++.+..+..||+++.+++...+.+++
T Consensus 178 ------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 178 ------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 33344488999999999999999999999999999999999999999 67777788999999888999999999
Q ss_pred HHhHhHHHHHHHH
Q 010234 231 GEGRSIYNNMKAF 243 (514)
Q Consensus 231 ~~gr~~~~~i~~~ 243 (514)
+.+|+++++++++
T Consensus 251 ~~~r~~~~~i~~n 263 (263)
T 2yj3_A 251 KNRKRLSNAIPSN 263 (263)
Confidence 9999999998864
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=5.4e-16 Score=149.20 Aligned_cols=65 Identities=29% Similarity=0.396 Sum_probs=47.7
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| |+.+.+|+.||+|+.+++.+||+++|++
T Consensus 203 ~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 203 SELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIRK 267 (279)
T ss_dssp HHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC-
T ss_pred HHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHHH
Confidence 5566777778899999999999999999999999999 6677779999999999999999998864
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=146.31 Aligned_cols=65 Identities=29% Similarity=0.451 Sum_probs=59.8
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| |+.+.+|+.||+|+.+++.+||+++|++
T Consensus 203 ~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 203 SVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 6677778888899999999999999999999999999 6778779999999999999999999975
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=147.34 Aligned_cols=65 Identities=18% Similarity=0.137 Sum_probs=58.8
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...++|++|||+.||++|++.||+||||| |+.+.+|+.||+|+.+++.+||+++|++
T Consensus 217 ~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 217 SYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred HHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 5566677778899999999999999999999999999 6777789999999999999999999964
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-15 Score=145.64 Aligned_cols=65 Identities=25% Similarity=0.329 Sum_probs=59.2
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| |+.+.+|+.||+++.+++.+||+++|++
T Consensus 208 ~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 208 ALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 5667777788899999999999999999999999999 6777789999999999999999999975
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=8.6e-16 Score=148.37 Aligned_cols=65 Identities=20% Similarity=0.271 Sum_probs=57.2
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccc--cccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDM--VLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~--v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| |+.+.+|++||+ ++.+++.+||+++|++
T Consensus 215 ~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~~ 281 (285)
T 3pgv_A 215 EAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLRK 281 (285)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHHH
Confidence 5566666777899999999999999999999999999 777777999985 7889999999999964
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.60 E-value=6.4e-15 Score=137.12 Aligned_cols=149 Identities=17% Similarity=0.151 Sum_probs=101.7
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc----CccceecccChHH---------Hhhh-----
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC----NEDISLKSLTGKE---------FMEM----- 143 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~----~~~~~~~~~~~~~---------~~~~----- 143 (514)
+.++++++.++|++|+++|++++++|||+...+..+++++|+... +....... .++. ...+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~-~~~~i~~~~~l~~~~~i~~~~~ 98 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDN-DGSIKKFFSNEGTNKFLEEMSK 98 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECT-TSCEEESSCSHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeC-CCCEEEEeccHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999987531 11100000 0100 0000
Q ss_pred -------------------------hHHHHHH-hhcCceEE-------EecChhhHHHHHH----HHhhCCCEEEEEcCC
Q 010234 144 -------------------------HDKKAHL-RQSGGLLF-------SRAEPRHKQEIVR----LLKEDGEVVAMTGDG 186 (514)
Q Consensus 144 -------------------------~~~~~~~-~~~~~~i~-------~~~~p~~k~~iv~----~l~~~~~~v~~iGDg 186 (514)
.+..... ......+. ......+|...++ .++...+++++|||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~ 178 (227)
T 1l6r_A 99 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDS 178 (227)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred HhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCc
Confidence 0000000 00011111 1122256655544 444556789999999
Q ss_pred cCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 187 VNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 187 ~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
.||++|++.||+|+||| ++.+.+|+.||+++.+++.+|+++++++
T Consensus 179 ~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 179 NNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 99999999999999999 6677778999999999999999999864
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=137.88 Aligned_cols=65 Identities=29% Similarity=0.373 Sum_probs=59.3
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| |+.+.+|+.||+|+.+++.+|++++|++
T Consensus 189 ~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 189 RMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp HHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred HHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 5667778888899999999999999999999999999 6777779999999999999999999964
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=6.3e-15 Score=140.85 Aligned_cols=65 Identities=31% Similarity=0.413 Sum_probs=59.4
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| |+.+.+|++||+|+.+++.+||+++|++
T Consensus 200 ~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 200 SLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 5667777888899999999999999999999999999 6777779999999999999999999965
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=8.9e-15 Score=140.15 Aligned_cols=65 Identities=20% Similarity=0.202 Sum_probs=59.7
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| ++.+.+|+.||+++.+++.+||+++|++
T Consensus 206 ~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 206 KRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp HHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 5677888888999999999999999999999999999 6777779999999999999999999965
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.2e-16 Score=153.45 Aligned_cols=148 Identities=14% Similarity=0.150 Sum_probs=111.0
Q ss_pred ccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 81 LRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 81 ~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
...+++|++.++++.|+++|++++|+||+....+.++++++|+...+..+....+..++-... ..........+++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~----~~~~~~~i~~~~k 213 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL----KGFKGELIHVFNK 213 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBE----EEECSSCCCTTCH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEccccee----Eeccccccchhhc
Confidence 357899999999999999999999999999999999999999876543332222211100000 0000000122445
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhh---hcCcceeeCC------CCcHHHHhcccccccCCCchhHHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK---LADIGIAMGI------AGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~---~A~igvamg~------~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
..|.+|...+..++..+++|+++|||.||++|++ .|++|+|||. ++.+.+++++|+|+.+++...++.+|-
T Consensus 214 ~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 214 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred ccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 5667777788888889999999999999999954 8999999994 466777999999999999999998774
Q ss_pred H
Q 010234 232 E 232 (514)
Q Consensus 232 ~ 232 (514)
+
T Consensus 294 ~ 294 (297)
T 4fe3_A 294 Q 294 (297)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.55 E-value=4.2e-15 Score=134.24 Aligned_cols=130 Identities=14% Similarity=0.179 Sum_probs=106.1
Q ss_pred HHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHH
Q 010234 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVR 171 (514)
Q Consensus 92 ~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~ 171 (514)
+|+.|+++|++++++||++...+..+++.+|+...... + ...|+...++++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~---------------------------~--~~K~~~~~~~~~ 104 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQG---------------------------R--EDKLVVLDKLLA 104 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECS---------------------------C--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcC---------------------------c--CChHHHHHHHHH
Confidence 99999999999999999999999999999998542111 0 222344566777
Q ss_pred HHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchh----HHHHHHHhHhHHHHHHHHHHHH
Q 010234 172 LLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFST----IVSAVGEGRSIYNNMKAFIRYM 247 (514)
Q Consensus 172 ~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~----i~~~i~~gr~~~~~i~~~~~~~ 247 (514)
.++..++++++|||+.||++|++.||++++|+ ++.+.+++.||+++.+++.+| +.+.+..+|..+.++++.+.|.
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~ 183 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEG 183 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTT
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhcc
Confidence 77778899999999999999999999999999 677777999999999886655 5667778899999999988887
Q ss_pred HHHH
Q 010234 248 ISSN 251 (514)
Q Consensus 248 ~~~~ 251 (514)
+.+|
T Consensus 184 ~~~~ 187 (189)
T 3mn1_A 184 HHHH 187 (189)
T ss_dssp C---
T ss_pred cccc
Confidence 6665
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=130.30 Aligned_cols=135 Identities=16% Similarity=0.114 Sum_probs=107.9
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPR 164 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 164 (514)
+.+++.++|++|+++|++++++||++...+..+++.+|+...... ....|+
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~-----------------------------~k~k~~ 86 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG-----------------------------KLEKET 86 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES-----------------------------CSCHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC-----------------------------CCCcHH
Confidence 456788999999999999999999999999999999998541100 022233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHH-HHH---HHhHhHHHHH
Q 010234 165 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIV-SAV---GEGRSIYNNM 240 (514)
Q Consensus 165 ~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~-~~i---~~gr~~~~~i 240 (514)
...++++.++..++++++|||+.||++|++.||++++|+ ++.+.+++.||+++.+++..|++ +++ ...|..+.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~ 165 (180)
T 1k1e_A 87 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVF 165 (180)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhh
Confidence 445677777878899999999999999999999999999 67777799999999998888877 433 3566777777
Q ss_pred HHHHHHHHH
Q 010234 241 KAFIRYMIS 249 (514)
Q Consensus 241 ~~~~~~~~~ 249 (514)
+..+.|...
T Consensus 166 ~~~~~~~~~ 174 (180)
T 1k1e_A 166 DTAQGFLKS 174 (180)
T ss_dssp HCHHHHHHH
T ss_pred hhccchhhh
Confidence 777766544
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.54 E-value=2e-14 Score=140.02 Aligned_cols=65 Identities=25% Similarity=0.338 Sum_probs=58.4
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| |+.+.+|+.||+|+.+++.+||+++|++
T Consensus 234 ~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 234 QQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 4556666777899999999999999999999999999 6777789999999999999999999964
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.6e-14 Score=141.23 Aligned_cols=156 Identities=12% Similarity=0.148 Sum_probs=115.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++||.....+..+.+.+|+......... ...+. +.. .........+..|
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~-~~d~~-~tg--------~~~~~~~~~kpk~ 247 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLE-IVSGK-LTG--------QVLGEVVSAQTKA 247 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEE-EETTE-EEE--------EEESCCCCHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeE-eeCCe-eee--------eecccccChhhhH
Confidence 6889999999999999999999999999999999999998542211000 00000 000 0000011123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAF 243 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~i~~~ 243 (514)
+...++++.++..++++++||||.||++|++.||+|++| ++.+.+++.||+++..+++++++.+++.......+++.+
T Consensus 248 ~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~ 325 (335)
T 3n28_A 248 DILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWK 325 (335)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccc
Confidence 667888899999999999999999999999999999999 567777999999999999999999998887777788888
Q ss_pred HHHHHHHH
Q 010234 244 IRYMISSN 251 (514)
Q Consensus 244 ~~~~~~~~ 251 (514)
+.+.+.+|
T Consensus 326 ~~~~~~~~ 333 (335)
T 3n28_A 326 SKEGHHHH 333 (335)
T ss_dssp --------
T ss_pred cccccccc
Confidence 88877665
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.47 E-value=5.4e-13 Score=128.43 Aligned_cols=65 Identities=20% Similarity=0.306 Sum_probs=55.9
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| ++.+.+|+.||+++.+++.+|++++|++
T Consensus 204 ~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 204 KSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred HHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 3444555666789999999999999999999999999 5667778899999999999999999964
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-13 Score=124.10 Aligned_cols=109 Identities=17% Similarity=0.229 Sum_probs=91.3
Q ss_pred HHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHH
Q 010234 90 HQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEI 169 (514)
Q Consensus 90 ~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~i 169 (514)
..+|+.|+++|+++.++||++...+..+++++|+...... ....|+...++
T Consensus 58 ~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~-----------------------------~k~k~~~~~~~ 108 (195)
T 3n07_A 58 GYGVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG-----------------------------QDDKVQAYYDI 108 (195)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS-----------------------------CSSHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC-----------------------------CCCcHHHHHHH
Confidence 3579999999999999999999999999999998642110 02234445777
Q ss_pred HHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHH
Q 010234 170 VRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVS 228 (514)
Q Consensus 170 v~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~ 228 (514)
++.++..++++++|||+.||++|++.||++++|+ ++.+.+++.||+++.+++.+|++.
T Consensus 109 ~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~ 166 (195)
T 3n07_A 109 CQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVR 166 (195)
T ss_dssp HHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHH
T ss_pred HHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHH
Confidence 8888888999999999999999999999999999 677888999999999988888543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.43 E-value=7.9e-14 Score=122.69 Aligned_cols=116 Identities=14% Similarity=0.092 Sum_probs=90.0
Q ss_pred EEEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHH--HcCCcccCccceecccChHHHhhhhHHHHHHh
Q 010234 74 TFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICR--EIGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151 (514)
Q Consensus 74 ~~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (514)
..++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+. . + .+
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~----~g-------------- 80 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----E----VS-------------- 80 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----E----CS--------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----E----EC--------------
Confidence 44666655544 3899999999999999999 67888888 55652 1 0 00
Q ss_pred hcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHH
Q 010234 152 QSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVS 228 (514)
Q Consensus 152 ~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~ 228 (514)
....|+.-.++++.++..++++++|||+.||++|++.||+++||+ ++.+.+++.||+++.+++.+|++.
T Consensus 81 -------~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G~~~ 149 (168)
T 3ewi_A 81 -------VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRGAIR 149 (168)
T ss_dssp -------CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTTHHH
T ss_pred -------CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCccHHH
Confidence 011234445666777778899999999999999999999999999 678888999999999999888554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.43 E-value=6.9e-13 Score=128.83 Aligned_cols=65 Identities=18% Similarity=0.241 Sum_probs=55.4
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccccccc-CCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLA-DDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~-~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| ++.+.+|+.||+++. +++.+||+++|++
T Consensus 230 ~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 230 NYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 3344445556789999999999999999999999999 566777899999999 9999999999864
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=6.7e-13 Score=119.84 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=100.7
Q ss_pred HHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHH
Q 010234 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVR 171 (514)
Q Consensus 92 ~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~ 171 (514)
+|+.|+++|+++.++||++...+..+++.+|+...... ....|+...++++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~-----------------------------~kpk~~~~~~~~~ 104 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG-----------------------------QVDKRSAYQHLKK 104 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS-----------------------------CSSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC-----------------------------CCChHHHHHHHHH
Confidence 79999999999999999999999999999998642111 1446777888999
Q ss_pred HHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHH----HHHHhHhHHHHHHHH
Q 010234 172 LLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVS----AVGEGRSIYNNMKAF 243 (514)
Q Consensus 172 ~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~----~i~~gr~~~~~i~~~ 243 (514)
.++..++++++|||+.||++|++.||++++|+ ++.+.++..||+++.+++.+|++. .+...|..+..+.+.
T Consensus 105 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~ 179 (191)
T 3n1u_A 105 TLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITG 179 (191)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHH
Confidence 99999999999999999999999999999999 677778999999999998777554 444556655554443
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.42 E-value=5.5e-13 Score=127.61 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=57.0
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||| ++.+.+|+.||+++.+++.+|+++++++
T Consensus 197 ~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 197 SRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 4555666777889999999999999999999999999 5667679999999999999999999864
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.41 E-value=7.3e-13 Score=118.00 Aligned_cols=109 Identities=16% Similarity=0.227 Sum_probs=90.7
Q ss_pred HHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHH
Q 010234 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVR 171 (514)
Q Consensus 92 ~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~ 171 (514)
+|+.|+++|++++++||++...+..+++.+|+. +... ....|+-..++++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~~~~-------------------------~~~k~~~l~~~~~ 96 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----VLHG-------------------------IDRKDLALKQWCE 96 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----EEES-------------------------CSCHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----eEeC-------------------------CCChHHHHHHHHH
Confidence 899999999999999999999999999999985 1000 0223344466777
Q ss_pred HHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 172 LLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 172 ~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
.++..++++++|||+.||++|++.||++++|+ ++.+.+++.||+++.+++.+|++..+.
T Consensus 97 ~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 97 EQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 77778899999999999999999999999999 677778999999999999888776553
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-12 Score=121.45 Aligned_cols=147 Identities=23% Similarity=0.247 Sum_probs=100.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc----Ccc-ce-------ecccChHHHhhhhH-----
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC----NED-IS-------LKSLTGKEFMEMHD----- 145 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~----~~~-~~-------~~~~~~~~~~~~~~----- 145 (514)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+... +.. +. ...+ +...++.+
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~~~~ 96 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM--DEEWILWNEIRKR 96 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCC--SHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999999886431 110 00 0000 00000000
Q ss_pred --------------------------H--HHHHhh--cCceEE-----Ee--cChhhH----HHHHHHHhhCCCEEEEEc
Q 010234 146 --------------------------K--KAHLRQ--SGGLLF-----SR--AEPRHK----QEIVRLLKEDGEVVAMTG 184 (514)
Q Consensus 146 --------------------------~--~~~~~~--~~~~i~-----~~--~~p~~k----~~iv~~l~~~~~~v~~iG 184 (514)
. ...... ....+. .. .....| ..+++.++...+++++||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iG 176 (231)
T 1wr8_A 97 FPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVG 176 (231)
T ss_dssp CTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEE
T ss_pred CCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEEC
Confidence 0 000000 011111 01 112234 445566667778999999
Q ss_pred CCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 185 DGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 185 Dg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
|+.||++|++.||++++|+ ++.+.+++.||+++.+++.+|+++++++
T Consensus 177 D~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 177 DGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp CSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 9999999999999999999 5566668899999999999999999864
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.4e-12 Score=124.44 Aligned_cols=65 Identities=25% Similarity=0.257 Sum_probs=55.9
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+|++|| ++.+.+|+.||+++.+++.+|+++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~~ 260 (268)
T 1nf2_A 196 RFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLER 260 (268)
T ss_dssp HHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHTT
T ss_pred HHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHHH
Confidence 4445555667789999999999999999999999999 5666678889999999999999999854
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=9.2e-13 Score=115.84 Aligned_cols=111 Identities=21% Similarity=0.151 Sum_probs=94.0
Q ss_pred HHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHH
Q 010234 91 QAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIV 170 (514)
Q Consensus 91 ~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv 170 (514)
.+++.|+++|++++++||++...+..+++.+|+...... ..+.|+....++
T Consensus 38 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~-----------------------------~kpk~~~~~~~~ 88 (164)
T 3e8m_A 38 AGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG-----------------------------VVDKLSAAEELC 88 (164)
T ss_dssp HHHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS-----------------------------CSCHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc-----------------------------cCChHHHHHHHH
Confidence 389999999999999999999999999999998642111 133455667788
Q ss_pred HHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchh-HHHHHH
Q 010234 171 RLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFST-IVSAVG 231 (514)
Q Consensus 171 ~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~-i~~~i~ 231 (514)
+.++..++++++|||+.||++|++.||++++++ ++.+..++.||+++.+++..| +.++++
T Consensus 89 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 89 NELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 888888999999999999999999999999999 677888999999999988777 666554
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.36 E-value=6.7e-13 Score=121.54 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=89.3
Q ss_pred HHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHHH
Q 010234 92 AIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVR 171 (514)
Q Consensus 92 ~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv~ 171 (514)
+|+.|+++|+++.++||++...+..+++.+|+...... ....|+-..++++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~-----------------------------~k~K~~~l~~~~~ 134 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQG-----------------------------QSDKLVAYHELLA 134 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECS-----------------------------CSSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcc-----------------------------cCChHHHHHHHHH
Confidence 89999999999999999999999999999999542110 0222444566777
Q ss_pred HHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchh-HHHHH
Q 010234 172 LLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFST-IVSAV 230 (514)
Q Consensus 172 ~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~-i~~~i 230 (514)
.++..++++++|||+.||++|++.||++++|+ ++.+.+++.||+++.+++..| +.+++
T Consensus 135 ~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G~v~e~~ 193 (211)
T 3ij5_A 135 TLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRGAVREVC 193 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred HcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCcHHHHHH
Confidence 77888999999999999999999999999999 567777999999999887776 33333
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.34 E-value=5.1e-12 Score=121.05 Aligned_cols=66 Identities=17% Similarity=0.172 Sum_probs=34.3
Q ss_pred HHHHHHHh-hCCCE--EEEEcCCcCCHHhhhhcCcceeeCCCCc--HHHHhc--cc-ccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLK-EDGEV--VAMTGDGVNDAPALKLADIGIAMGIAGT--EVAKEA--SD-MVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~-~~~~~--v~~iGDg~ND~~ml~~A~igvamg~~~~--~~~k~~--ad-~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++ ...++ +++|||+.||++|++.||+||||||+.. +.+++. || +++.+++.+|++++|++
T Consensus 195 ~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~ 268 (275)
T 1xvi_A 195 NWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDH 268 (275)
T ss_dssp HHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC-------------------------------
T ss_pred HHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHHH
Confidence 55666777 77778 9999999999999999999999994431 444543 78 99999999999998864
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.34 E-value=9.1e-12 Score=120.20 Aligned_cols=65 Identities=28% Similarity=0.352 Sum_probs=56.3
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||||+ ++.+.+|+.||+++.+++.+||+++|++
T Consensus 222 ~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 222 KRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp HHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 4445555666789999999999999999999999999 5667779999999999999999999864
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.30 E-value=7.6e-12 Score=109.66 Aligned_cols=117 Identities=17% Similarity=0.142 Sum_probs=97.3
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPR 164 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 164 (514)
..+++.++|++|+++|++++++||++...+..+.+.+|+..... .....|+
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~-----------------------------~~kp~~~ 87 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYT-----------------------------GSYKKLE 87 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEE-----------------------------CC--CHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhcc-----------------------------CCCCCHH
Confidence 46888999999999999999999999999999999999853110 0234555
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHH-HHHH
Q 010234 165 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIV-SAVG 231 (514)
Q Consensus 165 ~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~-~~i~ 231 (514)
...++++.++..++++++|||+.||++|.+.||++++++ ++.+..++.||+++.+.+..|+. ++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 667788888888899999999999999999999999998 56677788899999999998888 4443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.28 E-value=5.9e-12 Score=117.97 Aligned_cols=142 Identities=13% Similarity=0.175 Sum_probs=92.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc-CCcccCcccee--------------cccChHHHhhhh----
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI-GVFECNEDISL--------------KSLTGKEFMEMH---- 144 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~-gi~~~~~~~~~--------------~~~~~~~~~~~~---- 144 (514)
.+++.+.++|++|+++| +++++|||+...+..+.+.+ ++...+..... ..+..+....+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 58899999999999999 99999999999998887654 11111111100 000000000000
Q ss_pred -------------------------HH-----HHHHhh-cCce-------EEEecChhhHHHHHHHHhhCCCEEEEEcCC
Q 010234 145 -------------------------DK-----KAHLRQ-SGGL-------LFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 186 (514)
Q Consensus 145 -------------------------~~-----~~~~~~-~~~~-------i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg 186 (514)
.. ...+.. .+.. +-......+|...++.+.+... |++|||+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD~ 180 (239)
T 1u02_A 102 DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAGDD 180 (239)
T ss_dssp HSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEESS
T ss_pred hCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeCC
Confidence 00 000000 1111 1111222467777777766555 9999999
Q ss_pred cCCHHhhhhc--CcceeeCCCCcHHHHhcccccccC-CCchhHHHHHHH
Q 010234 187 VNDAPALKLA--DIGIAMGIAGTEVAKEASDMVLAD-DDFSTIVSAVGE 232 (514)
Q Consensus 187 ~ND~~ml~~A--~igvamg~~~~~~~k~~ad~v~~~-~~~~~i~~~i~~ 232 (514)
.||++||+.| |+|||||| + ++.||+++.+ ++.+||+++|++
T Consensus 181 ~ND~~Ml~~a~~g~~vam~N-a----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 181 ATDEAAFEANDDALTIKVGE-G----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp HHHHHHHHTTTTSEEEEESS-S----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CccHHHHHHhhCCcEEEECC-C----CCcceEEeCCCCCHHHHHHHHHH
Confidence 9999999999 99999995 4 5779999988 889999999864
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-11 Score=116.99 Aligned_cols=65 Identities=38% Similarity=0.417 Sum_probs=57.6
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+|++|| ++.+.++..||+++.+++.+|+.+++++
T Consensus 193 ~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 193 DEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 5566777778899999999999999999999999999 5666678999999999999999998864
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.8e-11 Score=115.09 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=55.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhc-------ccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEA-------SDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~-------ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++|||+.||++|++.||+||+|| ++.+.+|+. ||+++.+++.+|+++++++
T Consensus 168 ~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 168 QYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 4455555666789999999999999999999999999 566666775 8999999999999999964
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=9.8e-12 Score=113.40 Aligned_cols=130 Identities=22% Similarity=0.287 Sum_probs=92.1
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEE---
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLF--- 158 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--- 158 (514)
+.++.|++.++++.++++|+++.++||+....+..+.+.+|+....... ...... .......
T Consensus 74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------~~~~~~~~~~ 138 (211)
T 1l7m_A 74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANR---LIVKDG------------KLTGDVEGEV 138 (211)
T ss_dssp TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEE---EEEETT------------EEEEEEECSS
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEee---eEEECC------------EEcCCcccCc
Confidence 3467899999999999999999999999998888888888874311100 000000 0000000
Q ss_pred E--ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHH
Q 010234 159 S--RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVS 228 (514)
Q Consensus 159 ~--~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~ 228 (514)
. ...|+.-.++++.++...+++++|||+.||++|++.||++++|+ + .+..+..||+++.+++...+..
T Consensus 139 ~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~-~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-A-KPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp CSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-C-CHHHHTTCSEEECSSCGGGGGG
T ss_pred cCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-C-CHHHHhhcceeecchhHHHHHH
Confidence 0 01123335566677778899999999999999999999999997 4 4556888999998877776654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=117.08 Aligned_cols=55 Identities=18% Similarity=0.238 Sum_probs=44.8
Q ss_pred HHHHHHHhh-CCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCC
Q 010234 167 QEIVRLLKE-DGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD 221 (514)
Q Consensus 167 ~~iv~~l~~-~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~ 221 (514)
..+++.++. ..++|++|||+.||++||+.||+||||||+..+.+++.||+++.++
T Consensus 185 ~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 185 KILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp HHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHHH
T ss_pred HHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEeccc
Confidence 445556665 7789999999999999999999999999554366688899988653
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-11 Score=111.32 Aligned_cols=111 Identities=19% Similarity=0.217 Sum_probs=91.7
Q ss_pred HHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhhHHHHH
Q 010234 91 QAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIV 170 (514)
Q Consensus 91 ~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~k~~iv 170 (514)
.+|++|+++|++++++||++...+..+++.+|+..... .....|+...+++
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~-----------------------------~~kpk~~~~~~~~ 110 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQ-----------------------------GQSNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEEC-----------------------------SCSCSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeec-----------------------------CCCCCHHHHHHHH
Confidence 58999999999999999999999999999999853110 0133455567777
Q ss_pred HHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHH-HHHH
Q 010234 171 RLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIV-SAVG 231 (514)
Q Consensus 171 ~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~-~~i~ 231 (514)
+.++...+++++|||+.||++|++.||++++++ ++.+.++..||+++.+++..|++ ++++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 888888899999999999999999999999999 55666688899999998888877 6664
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.23 E-value=8.5e-12 Score=114.58 Aligned_cols=137 Identities=18% Similarity=0.226 Sum_probs=99.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.+.++.|+++|++++++|+.....+..+.+.+|+......+.... .+. +.. ............
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~-~~~-~~~--------~~~~~~~~~k~k 143 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVE-NDA-LNG--------LVTGHMMFSHSK 143 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-TTE-EEE--------EEEESCCSTTHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEe-CCE-EEe--------eeccCCCCCCCh
Confidence 4688999999999999999999999999999999999999864322110000 000 000 000000001122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
|+.-..+++.++..++++++|||+.||++|++.||++++| ++.+..++.||+++.++++.++..+++
T Consensus 144 ~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~ 210 (217)
T 3m1y_A 144 GEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIE 210 (217)
T ss_dssp HHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC--
T ss_pred HHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhc
Confidence 3344667778888899999999999999999999999999 556677999999999999999988874
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=3.2e-11 Score=114.41 Aligned_cols=62 Identities=18% Similarity=0.262 Sum_probs=51.2
Q ss_pred HHHHHHHhhCC--CEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDG--EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~--~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++... +++++|||+.||++|++.||+|||||| +.+ + .+++++.+++.+|+.+++++
T Consensus 182 ~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n-a~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 182 ARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGR-GDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp HHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSS-SCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCC-hhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 34444445556 899999999999999999999999995 444 3 68899999999999998864
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.18 E-value=3.6e-11 Score=111.95 Aligned_cols=130 Identities=25% Similarity=0.326 Sum_probs=102.0
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|+++|++++++|+.....+..+.+.+|+......+. .+++ .-.....
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~kp~ 162 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIA----GDDS----------------VERGKPH 162 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEE----CTTT----------------SSSCTTS
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEE----eCCC----------------CCCCCCC
Confidence 3578999999999999999999999999999999999999865332211 1110 1112345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcHHHHh-cccccccCCCchhHHHHHHHhH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTEVAKE-ASDMVLADDDFSTIVSAVGEGR 234 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~~~k~-~ad~v~~~~~~~~i~~~i~~gr 234 (514)
|+-...+++.++..++++++|||+.||++|++.||+ +|+||++..+..++ .||+++. +...+.++++.++
T Consensus 163 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~~ 236 (237)
T 4ex6_A 163 PDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDGH 236 (237)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHccC
Confidence 667788999999999999999999999999999998 99999666555555 7999984 6777888886653
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.15 E-value=8e-11 Score=119.67 Aligned_cols=141 Identities=19% Similarity=0.233 Sum_probs=106.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcccee---cccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISL---KSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+......... ..+++.. .......+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~-------------~~~v~~~k 322 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRV-------------VGPIIDRA 322 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEE-------------CSSCCCHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeE-------------ccCCCCCc
Confidence 7899999999999999999999999999999999999999542211000 0000000 00000012
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNN 239 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~~ 239 (514)
..|+-..++++.++..++++++|||+.||++|++.||+|+++ ++.+.+++.||+++.+++.++++.++..+|.-++.
T Consensus 323 pk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~ 399 (415)
T 3p96_A 323 GKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEA 399 (415)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHH
T ss_pred chHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHH
Confidence 233344667777788889999999999999999999999999 45677789999999999999999999877765544
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.13 E-value=4.4e-11 Score=109.83 Aligned_cols=124 Identities=11% Similarity=0.031 Sum_probs=95.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.|++.+.++.+++.|+++.++|+. ..+....+.+|+......+ +.+++ .-..+..|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~----~~~~~----------------~~~~Kp~~ 148 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAI----ADPAE----------------VAASKPAP 148 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEE----CCTTT----------------SSSCTTSS
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceE----ecccc----------------CCCCCCCh
Confidence 46799999999999999999999998 4456677778875432211 11111 00122345
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+....+++.++..++++++|||+.||++|++.||++++|+ ++.+..+ .||+++.+++..++..+++
T Consensus 149 ~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~~ 214 (221)
T 2wf7_A 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHHH
T ss_pred HHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHHH
Confidence 5678889999999999999999999999999999999999 5566657 8999999988888887764
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.4e-11 Score=116.66 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=99.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|++++++||.....+..+++.+|+.......... .+..+.. .........+..|
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~--~dg~~tg--------~i~~~~~~~kpkp 248 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEI--RDNVLTD--------NITLPIMNAANKK 248 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEE--ETTEEEE--------EECSSCCCHHHHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEe--eCCeeee--------eEecccCCCCCCH
Confidence 58899999999999999999999999999999999999985422211000 0000000 0000000112234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+-..++++.++..++++++|||+.||++|++.||++++++ +.+..++.||.++..++..++..+++
T Consensus 249 ~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 249 QTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 4446677778888899999999999999999999999994 56666888999998889988887764
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.7e-10 Score=107.12 Aligned_cols=124 Identities=14% Similarity=0.091 Sum_probs=91.8
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPR 164 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 164 (514)
+.|++.+.++.|+++|+++.++|+... +..+.+.+|+......+ +.+++ .-..++.|+
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i----~~~~~----------------~~~~Kp~~~ 150 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAI----VDPTT----------------LAKGKPDPD 150 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEE----CCC-------------------------CC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEE----eeHhh----------------CCCCCCChH
Confidence 689999999999999999999999855 77788888886533221 11111 112344566
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 165 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 165 ~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
--..+++.++..++++++|||+.||+.|.+.||++++|.+ +.+..+ .||+++.+.+..++..+++.
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~-~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVG-QGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC---------CSEECSSGGGCCHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEEC-Cccccc-cCCEEeCChHhCCHHHHHHH
Confidence 7788999999999999999999999999999999999994 445445 89999999888888877754
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=8.1e-11 Score=107.16 Aligned_cols=128 Identities=14% Similarity=0.185 Sum_probs=100.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccC--ccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN--EDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.+.|++.+.++.|+++|++++++|+.....+....+.+|+.... ..+. +.+ . ...+.
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~----~~~----------------~-~~~kp 128 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL----GRD----------------E-APPKP 128 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE----CTT----------------T-SCCTT
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE----eCC----------------C-CCCCC
Confidence 46799999999999999999999999999999999999986533 2111 100 0 12234
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHh
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRS 235 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~ 235 (514)
.|+-...+++.++...+++++|||+.||++|.+.||+ +|+|++ +.+..+..||+++. +...+...++..+.
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~-~~~~~~~~ad~v~~--~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNL-PDNPWPELTDWHAR--DCAQLRDLLSAEGH 200 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSS-SSCSCGGGCSEECS--SHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeC-CCCcccccCCEEeC--CHHHHHHHHHhccc
Confidence 5566788999999999999999999999999999999 999994 44455788999985 67778877765443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=107.55 Aligned_cols=129 Identities=11% Similarity=0.088 Sum_probs=99.0
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|+++|+++.++|+.....+....+.+|+......+... +. .-...+.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~----~~----------------~~~~kp~ 144 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGS----SL----------------DGKLSTK 144 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEE----CT----------------TSSSCSH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeecc----CC----------------CCCCCCC
Confidence 357899999999999999999999999999999999999986533221110 00 0001234
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcHHH-HhcccccccCCCchhHHHHHHHh
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTEVA-KEASDMVLADDDFSTIVSAVGEG 233 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~~~-k~~ad~v~~~~~~~~i~~~i~~g 233 (514)
|+....+++.++..++++++|||+.||++|++.||+ +|+||++..+.. +..||+++. +...+.+++...
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~~ 217 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILEL 217 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHHH
Confidence 555688899999999999999999999999999998 899996555543 688999985 566777777543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=114.75 Aligned_cols=141 Identities=16% Similarity=0.100 Sum_probs=93.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccCh------H------------HHhhhh-
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTG------K------------EFMEMH- 144 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~------~------------~~~~~~- 144 (514)
.+.+++.++++.|++ |+++.++||+....+....+.+++.... ....... . ......
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL---HGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE---EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh---cccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 578999999999999 9999999999877777777777763211 0000000 0 000000
Q ss_pred HHHHHH----hhc-CceEE---EecChhhHHHHHHHHhhCCCE----EEEEcCCcCCHHhhhhc----CcceeeCCCCcH
Q 010234 145 DKKAHL----RQS-GGLLF---SRAEPRHKQEIVRLLKEDGEV----VAMTGDGVNDAPALKLA----DIGIAMGIAGTE 208 (514)
Q Consensus 145 ~~~~~~----~~~-~~~i~---~~~~p~~k~~iv~~l~~~~~~----v~~iGDg~ND~~ml~~A----~igvamg~~~~~ 208 (514)
+..... ... ...+. ....+.+|...++.+ ..++ |++||||.||++|++.| |+|||| ++.+
T Consensus 179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi--~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~ 254 (332)
T 1y8a_A 179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGY--CESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNE 254 (332)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHH--HHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCH
T ss_pred HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhcc--ChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCH
Confidence 000000 000 00011 122356687777743 4455 99999999999999999 999999 4677
Q ss_pred HHHhcccccccCCCchhHHHHHHH
Q 010234 209 VAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 209 ~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
.+|+.||+++.+++.+|+++++++
T Consensus 255 ~lk~~Ad~v~~~~~~dGV~~~l~~ 278 (332)
T 1y8a_A 255 YALKHADVVIISPTAMSEAKVIEL 278 (332)
T ss_dssp HHHTTCSEEEECSSTHHHHHHHHH
T ss_pred HHHhhCcEEecCCCCCHHHHHHHH
Confidence 779999999999999999887753
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.06 E-value=8.8e-11 Score=106.11 Aligned_cols=119 Identities=24% Similarity=0.365 Sum_probs=90.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|++++++|+.+...+..+ +.+|+... ... ...... ........|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~--~~~~~~----------------~~~~~~~~~ 138 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANR--AIFEDG----------------KFQGIRLRF 138 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEE--EEEETT----------------EEEEEECCS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eee--EEeeCC----------------ceECCcCCc
Confidence 7899999999999999999999999988888888 88887543 110 000000 011145566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
..|...++.+ .++++++|||+.||++|++.||++|+|+++ .+ .||+++.+ .+.+.++++
T Consensus 139 ~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~-~~----~ad~v~~~--~~el~~~l~ 197 (201)
T 4ap9_A 139 RDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGRE-IP----GADLLVKD--LKELVDFIK 197 (201)
T ss_dssp SCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSC-CT----TCSEEESS--HHHHHHHHH
T ss_pred cCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCC-Cc----cccEEEcc--HHHHHHHHH
Confidence 7888888888 788999999999999999999999999954 44 78999864 444666664
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.02 E-value=3.7e-10 Score=103.78 Aligned_cols=119 Identities=17% Similarity=0.186 Sum_probs=91.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
..+.+++.+.++.+++.|++++++|+..........+.+|+......+.. .++ .-..+..
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~----~~~----------------~~~~kp~ 152 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS----AEK----------------LPYSKPH 152 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE----CTT----------------SSCCTTS
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEe----ccc----------------cCCCCCC
Confidence 35679999999999999999999999999888888888887543222111 000 0011234
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceee----CCCCcHHHHhcccccccCCC
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAM----GIAGTEVAKEASDMVLADDD 222 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvam----g~~~~~~~k~~ad~v~~~~~ 222 (514)
|+....+++.++...+++++|||+.||++|++.||++++| + ++.+..+..||+++.+.+
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~~~ 215 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSSLT 215 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSCGG
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECCHH
Confidence 5667889999999999999999999999999999999999 6 333445788999987544
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.2e-10 Score=107.27 Aligned_cols=132 Identities=16% Similarity=0.106 Sum_probs=90.1
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEECCC---------------------ChHHHHHHHHHcCCcccCccceecccChHHHh
Q 010234 84 PPRNEVHQAIEDCRAA-GIRVMVITGD---------------------NKNTAEAICREIGVFECNEDISLKSLTGKEFM 141 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~-Gi~v~i~TG~---------------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 141 (514)
...+++.+.++.+++. |+++.+.|.. ....+..+.+..|+....... ...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-----~~~--- 193 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRC-----NPL--- 193 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEEC-----CGG---
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEc-----ccc---
Confidence 4568999999999998 9999998876 233334444444442110000 000
Q ss_pred hhhHHHHHHhhcCceEEEecC------hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccc
Q 010234 142 EMHDKKAHLRQSGGLLFSRAE------PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASD 215 (514)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~~~~------p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad 215 (514)
........+.... ++....+++.++...+++++|||+.||++|++.||++++|| ++.+..++.||
T Consensus 194 --------~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~ 264 (289)
T 3gyg_A 194 --------AGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHN 264 (289)
T ss_dssp --------GTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCC
T ss_pred --------ccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCC
Confidence 0000001122211 23335677777888899999999999999999999999999 56777799999
Q ss_pred ccccCCCchhHHHHHHH
Q 010234 216 MVLADDDFSTIVSAVGE 232 (514)
Q Consensus 216 ~v~~~~~~~~i~~~i~~ 232 (514)
+++.+++.+|+++++++
T Consensus 265 ~v~~~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 265 LITDSEYSKGITNTLKK 281 (289)
T ss_dssp CBCSSCHHHHHHHHHHH
T ss_pred EEcCCCCcCHHHHHHHH
Confidence 99999999999999864
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.4e-10 Score=103.40 Aligned_cols=129 Identities=13% Similarity=0.110 Sum_probs=99.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.+++.+.++.|++.|++++++|+.....+....+.+|+......+ +.+++ .-..++.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~----~~~~~----------------~~~~kp~ 149 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINI----VTRDD----------------VSYGKPD 149 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCE----ECGGG----------------SSCCTTS
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhee----ecccc----------------CCCCCCC
Confidence 356899999999999999999999999999999999999986533221 11111 1112345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcHHHHhc-ccccccCCCchhHHHHHHHh
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTEVAKEA-SDMVLADDDFSTIVSAVGEG 233 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~~~k~~-ad~v~~~~~~~~i~~~i~~g 233 (514)
|+-...+++.++..++++++|||+.||++|++.||+ +|++|.+..+..+.. ||+++. +...+.+++++.
T Consensus 150 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~~ 222 (233)
T 3s6j_A 150 PDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDEI 222 (233)
T ss_dssp THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGGT
T ss_pred hHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHHH
Confidence 666788999999999999999999999999999998 777775566665665 899885 677777777544
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.7e-09 Score=97.00 Aligned_cols=128 Identities=16% Similarity=0.099 Sum_probs=96.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceE-E-Ee
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL-F-SR 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~-~~ 160 (514)
-++.|++.+.++.|+++ ++++++|+.+...+..+.+.+|+...... ....+. +... . ..
T Consensus 68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~---~~~~~~---------------~~~~~~~~~ 128 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH---KLEIDD---------------SDRVVGYQL 128 (206)
T ss_dssp CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE---EEEECT---------------TSCEEEEEC
T ss_pred cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc---eeEEcC---------------CceEEeeec
Confidence 36789999999999999 99999999999999999999998642210 000000 0111 1 13
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
..|+.|...++.++..++++++|||+.||++|.+.||++++++ +..+ .++.++.++..++..++.++++
T Consensus 129 p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 129 RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APEN-VIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp CSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHH-HHHHCTTSCEECSHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHH-HHHHHhhhccccchHHHHHHHH
Confidence 6788999999999999999999999999999999999999985 4444 4555554443457778777664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=99.94 Aligned_cols=124 Identities=13% Similarity=0.046 Sum_probs=85.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.|++.+.++.|+++|++++++|+.....+..+.+.+|+......-.......... ........++|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 149 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS------------FKELDNSNGAC 149 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB------------EEEEECTTSTT
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc------------eeccCCCCCCc
Confidence 478999999999999999999999999999999999999853110000000000000 00011122344
Q ss_pred hhHHHHHH-HHhhCCCEEEEEcCCcCCHHhhhh----cCcceeeCCCCcHHHHhcccccccC
Q 010234 164 RHKQEIVR-LLKEDGEVVAMTGDGVNDAPALKL----ADIGIAMGIAGTEVAKEASDMVLAD 220 (514)
Q Consensus 164 ~~k~~iv~-~l~~~~~~v~~iGDg~ND~~ml~~----A~igvamg~~~~~~~k~~ad~v~~~ 220 (514)
..+.+.+. .++..++++++|||+.||++|++. ++++++|+ ++.+..+..||+++.+
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~ 210 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARN 210 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESS
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCC
Confidence 55655554 458899999999999999999975 45666666 4666778889999864
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.91 E-value=2.5e-09 Score=101.39 Aligned_cols=128 Identities=18% Similarity=0.232 Sum_probs=93.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccC-ccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN-EDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
..+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... .. ...++. .-....
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~----------------~~~~kp 161 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF----LVTPDD----------------VPAGRP 161 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC----CBCGGG----------------SSCCTT
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHh----eecCCc----------------cCCCCC
Confidence 456799999999999999999999999988888888888764321 11 111111 001234
Q ss_pred ChhhHHHHHHHHhhCC-CEEEEEcCCcCCHHhhhhcC---cceeeCCCC-----------------------cHHHHhc-
Q 010234 162 EPRHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLAD---IGIAMGIAG-----------------------TEVAKEA- 213 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~---igvamg~~~-----------------------~~~~k~~- 213 (514)
.|+....+++.++... +++++|||+.||++|++.|| ++|++|++. .+..+..
T Consensus 162 ~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T 1swv_A 162 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENG 241 (267)
T ss_dssp SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcC
Confidence 5667788999999988 99999999999999999999 678888442 2334444
Q ss_pred ccccccCCCchhHHHHHHH
Q 010234 214 SDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 214 ad~v~~~~~~~~i~~~i~~ 232 (514)
||+++. +...+..++++
T Consensus 242 ad~v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 242 AHFTIE--TMQELESVMEH 258 (267)
T ss_dssp CSEEES--SGGGHHHHHHH
T ss_pred Cceecc--CHHHHHHHHHH
Confidence 899985 45566666643
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-09 Score=100.14 Aligned_cols=124 Identities=15% Similarity=0.138 Sum_probs=88.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.+++.+.++.+++.|++++++|+..........+.+|+......+ ...++. -..+..|
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----------------~~~k~~~ 148 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDII----IGGEDV----------------THHKPDP 148 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEE----ECGGGC----------------SSCTTST
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeee----eehhhc----------------CCCCCCh
Confidence 35789999999999999999999999998888888888875432211 111100 0012334
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceee----CCCCcHHHHhc-ccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAM----GIAGTEVAKEA-SDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvam----g~~~~~~~k~~-ad~v~~~~~~~~i~~~i 230 (514)
.....+++.++...+++++|||+.||++|++.||++++| ++ +.+..+.. ||+++.++ +.+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~-~~~~l~~~~ad~v~~~~--~el~~~l 217 (225)
T 3d6j_A 149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMT-TAQEFQAYPYDRIISTL--GQLISVP 217 (225)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSC-CTTGGGGSCCSEEESSG--GGGC---
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCC-ChHHHhhcCCCEEECCH--HHHHHhh
Confidence 556788899999999999999999999999999999887 53 33333554 89998653 3344444
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=4.4e-09 Score=99.76 Aligned_cols=60 Identities=12% Similarity=0.241 Sum_probs=47.8
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcC----CcCCHHhhhhcC-cceeeCCCCcHHHHhcccccccCCCch
Q 010234 164 RHKQEIVRLL-KEDGEVVAMTGD----GVNDAPALKLAD-IGIAMGIAGTEVAKEASDMVLADDDFS 224 (514)
Q Consensus 164 ~~k~~iv~~l-~~~~~~v~~iGD----g~ND~~ml~~A~-igvamg~~~~~~~k~~ad~v~~~~~~~ 224 (514)
.+|...++.+ +...++|++||| +.||++||+.|| .|++|| |+.+.+|+.||+++.+++.+
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~~~ 261 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETAHE 261 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC---
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCcCC
Confidence 3455555554 556789999999 999999999999 599999 77888899999999877654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.6e-09 Score=100.92 Aligned_cols=125 Identities=18% Similarity=0.134 Sum_probs=93.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|+++|++++++|+.....+..+.+.+|+......+... + ..-...+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~----~----------------~~~~~kp~ 168 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGS----N----------------LDGTRVNK 168 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEE----C----------------TTSCCCCH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEec----c----------------ccCCCCCC
Confidence 357899999999999999999999999999999999999986533221110 0 00011234
Q ss_pred hhhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcHH-HHhcccccccCCCchhHHHH
Q 010234 163 PRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADI---GIAMGIAGTEV-AKEASDMVLADDDFSTIVSA 229 (514)
Q Consensus 163 p~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~~-~k~~ad~v~~~~~~~~i~~~ 229 (514)
|+-...+++.++.. ++++++|||+.||++|.+.||+ +|++|++..+. .+..||+++.+ ...+.++
T Consensus 169 ~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~ 238 (240)
T 3sd7_A 169 NEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDI 238 (240)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHH
T ss_pred HHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHH
Confidence 45557888999999 9999999999999999999998 88888555444 35789999864 4444443
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.1e-09 Score=101.40 Aligned_cols=127 Identities=12% Similarity=0.090 Sum_probs=98.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.++++.|+++|++++++|+.+...+....+.+|+......+. ..++ .-..++.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~kp~ 157 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVL----SVDA----------------VRLYKTA 157 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEE----EGGG----------------TTCCTTS
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEE----Eecc----------------cCCCCcC
Confidence 3568999999999999999999999999999999999999865433221 1110 0112345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceee----CCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAM----GIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvam----g~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
|+-...+++.++..++++++|||+.||+.|.+.||++++| + ++.+..+..||+++. +...+.+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 158 PAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp HHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 5667888999999999999999999999999999999999 6 444444777899885 66777777754
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.8e-09 Score=97.68 Aligned_cols=125 Identities=10% Similarity=0.134 Sum_probs=92.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCC---hHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDN---KNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
.+.|++.+.++.|++.|+++.++|+.. ........+.+|+......+ +..++. -..+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~----~~~~~~----------------~~~k 158 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKT----FFADEV----------------LSYK 158 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEE----EEHHHH----------------TCCT
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhh----eecccc----------------CCCC
Confidence 358999999999999999999999999 88888888888886533221 111111 0112
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcceee---CCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGIAM---GIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~igvam---g~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+.|+--..+++.++..++++++|||+. ||++|++.||++++| | ++.+..+..+|+++. +...+.++++
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHh--hHHHHHHHHH
Confidence 456666888999999999999999999 999999999999999 5 223233455788775 4555666553
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.7e-09 Score=98.43 Aligned_cols=126 Identities=14% Similarity=0.191 Sum_probs=94.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.+.++.|+++|+++.++|+.+...+....+.+|+......+. ..++ .-..++.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~kp~ 154 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLI----SVDE----------------VRLFKPH 154 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEE----EGGG----------------TTCCTTC
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeE----ehhh----------------cccCCCC
Confidence 4578999999999999999999999999999999999999865332211 1110 0112345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCC---CCcHHHHhcccccccCCCchhHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGI---AGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~---~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
|+-...+++.++..++++++|||+.||+.|.+.||++++|-+ ++.+..+..+|+++. +...+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 155 QKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred hHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 566788999999999999999999999999999999999921 334444667888885 444444433
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.9e-09 Score=96.80 Aligned_cols=118 Identities=13% Similarity=0.091 Sum_probs=91.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|++.|++++++|+.....+....+.+|+......+. ..++ .-..++.|
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~kp~~ 148 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVL----SGEE----------------FKESKPNP 148 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE----EGGG----------------CSSCTTSS
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEe----eccc----------------ccCCCCCh
Confidence 468999999999999999999999999999999999999865433211 1110 01123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCC-cHHHHhcccccccCC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAG-TEVAKEASDMVLADD 221 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~-~~~~k~~ad~v~~~~ 221 (514)
+...++++.++..++++++|||+.||++|.+.||+++++.+++ .+..+..||+++.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~ 207 (214)
T 3e58_A 149 EIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSL 207 (214)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSG
T ss_pred HHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHH
Confidence 6678899999999999999999999999999999988887543 233346788888653
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.7e-09 Score=93.94 Aligned_cols=126 Identities=18% Similarity=0.165 Sum_probs=88.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCCh---------------HHHHHHHHHcC--CcccCccceecccChHHHhhhhHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNK---------------NTAEAICREIG--VFECNEDISLKSLTGKEFMEMHDK 146 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~~ 146 (514)
++.|++.++|++|+++|++++++|+++. ..+....+.+| +... ......+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~----~~~~~~~~-------- 94 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI----FMCPHGPD-------- 94 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE----EEECCCTT--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE----EEcCCCCC--------
Confidence 5789999999999999999999999986 55666677777 3221 00000000
Q ss_pred HHHHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcC---cceeeCCCCcHHHH---hcccccccC
Q 010234 147 KAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD---IGIAMGIAGTEVAK---EASDMVLAD 220 (514)
Q Consensus 147 ~~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~---igvamg~~~~~~~k---~~ad~v~~~ 220 (514)
+..-..++.|+--..+++.++..++++++|||+.||+.|.+.|| ++|++|+...+..+ ..||+++.
T Consensus 95 -------~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~- 166 (179)
T 3l8h_A 95 -------DGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCE- 166 (179)
T ss_dssp -------SCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEES-
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEec-
Confidence 01112244566678899999999999999999999999999999 47777733333322 45788875
Q ss_pred CCchhHHHHH
Q 010234 221 DDFSTIVSAV 230 (514)
Q Consensus 221 ~~~~~i~~~i 230 (514)
+...+.+.+
T Consensus 167 -~l~el~~~l 175 (179)
T 3l8h_A 167 -DLAAVAEQL 175 (179)
T ss_dssp -SHHHHHHHH
T ss_pred -CHHHHHHHH
Confidence 455666555
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.82 E-value=8.1e-09 Score=95.49 Aligned_cols=125 Identities=19% Similarity=0.237 Sum_probs=95.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|++. +++.++|+.+...+....+.+|+......+ +..++. -..++.
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~----~~~~~~----------------~~~kp~ 157 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSI----TTSEEA----------------GFFKPH 157 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEE----EEHHHH----------------TBCTTS
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHccee----Eecccc----------------CCCCcC
Confidence 35779999999999999 999999999999999999999986533221 111110 012345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcC---cceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLAD---IGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~---igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
|+-...+++.++..++++++|||+. ||+.|.+.|| ++|++| ++.+..+..||+++. +...+.++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHH
Confidence 5667889999999999999999997 9999999999 678888 444544668999985 5556666654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.82 E-value=3.8e-09 Score=95.34 Aligned_cols=119 Identities=14% Similarity=0.164 Sum_probs=88.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.|++.+.++.+++.|++++++|+....... ..+.+|+...... .+...+ .-..++.|
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~----~~~~~~----------------~~~~Kp~~ 143 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTE----ILTSQS----------------GFVRKPSP 143 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEE----EECGGG----------------CCCCTTSS
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheee----EEecCc----------------CCCCCCCc
Confidence 46899999999999999999999999988888 8888887542211 111111 00112345
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+....+++.++..++++++|||+.||++|++.||++ ++|++ +.+ .||+++.+ ...+.+++
T Consensus 144 ~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~-~~~----~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 144 EAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLE-STY----EGNHRIQA--LADISRIF 204 (207)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSC-CSC----TTEEECSS--TTHHHHHT
T ss_pred HHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEec-CCC----CCCEEeCC--HHHHHHHH
Confidence 666789999999999999999999999999999997 88884 433 68988864 44455544
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=4.1e-09 Score=100.94 Aligned_cols=122 Identities=13% Similarity=0.153 Sum_probs=91.4
Q ss_pred CCCChhHHHHHHHHHHcCC--cEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 83 DPPRNEVHQAIEDCRAAGI--RVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi--~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
-++.|++.++++.|+++|+ +++++|+.....+....+.+|+......+......+ ......+
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~----------------~~~~~~K 204 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSR----------------TDTLVCK 204 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSS----------------CSSCCCT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCC----------------CcccCCC
Confidence 4578999999999999999 999999999999999999999865433221100000 0112234
Q ss_pred cChhhHHHHHHHHhhCC-CEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHH-----HhcccccccC
Q 010234 161 AEPRHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVA-----KEASDMVLAD 220 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~-----k~~ad~v~~~ 220 (514)
..|+--..+++.++..+ +++++|||+.||+.|.+.||+|++|+++..... ...||+++.+
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~s 270 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD 270 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESS
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCC
Confidence 55667788999999998 999999999999999999999999985544321 2367788753
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=7.9e-09 Score=98.22 Aligned_cols=127 Identities=10% Similarity=0.045 Sum_probs=93.1
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc-CccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC-NEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.++.|++.+.++.|++.|++++++|+.....+..+.+.+|+... ...+ ..+++ .-...+
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~----~~~~~----------------~~~~kp 169 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPAST----VFATD----------------VVRGRP 169 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEE----ECGGG----------------SSSCTT
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceE----ecHHh----------------cCCCCC
Confidence 36789999999999999999999999999999999888887543 1111 11111 011234
Q ss_pred ChhhHHHHHHHHhhCC-CEEEEEcCCcCCHHhhhhcC---cceeeCCC-----------------------CcHHHH-hc
Q 010234 162 EPRHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLAD---IGIAMGIA-----------------------GTEVAK-EA 213 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~---igvamg~~-----------------------~~~~~k-~~ 213 (514)
.|.--..+++.++..+ +++++|||+.||+.|.+.|| ++|++|.+ ..+..+ ..
T Consensus 170 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 249 (277)
T 3iru_A 170 FPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAG 249 (277)
T ss_dssp SSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCC
Confidence 5566788999999999 99999999999999999999 57777732 123334 44
Q ss_pred ccccccCCCchhHHHHHH
Q 010234 214 SDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 214 ad~v~~~~~~~~i~~~i~ 231 (514)
||+++. +...+.++++
T Consensus 250 ad~v~~--~~~el~~~l~ 265 (277)
T 3iru_A 250 AHYVID--SVADLETVIT 265 (277)
T ss_dssp CSEEES--SGGGTHHHHH
T ss_pred CCEEec--CHHHHHHHHH
Confidence 899986 4455555554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.77 E-value=9.9e-09 Score=94.60 Aligned_cols=118 Identities=13% Similarity=0.095 Sum_probs=88.3
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAG-IRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~G-i~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.|++.+.++.|+++| +++.++|+..........+.+|+......+ .......
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~-------------------------~~~~kpk 159 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHI-------------------------EVMSDKT 159 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEE-------------------------EEESCCS
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhee-------------------------eecCCCC
Confidence 57899999999999999 999999999988889999999886533221 1122345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcceee-------CCCCcHHHHhcc-cccccCCCchhHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGIAM-------GIAGTEVAKEAS-DMVLADDDFSTIVSA 229 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~igvam-------g~~~~~~~k~~a-d~v~~~~~~~~i~~~ 229 (514)
|+.-..+++.++..++++++|||+. ||+.|.+.||+++++ |+...+. +..+ |+++. +...+.++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~-~~~~~d~v~~--~l~el~~~ 232 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTET-FAHERLKQVK--RLDDLLSL 232 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---C-CCCTTEEECS--SGGGHHHH
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCccc-ccCCCceecc--cHHHHHHh
Confidence 6667889999999999999999996 999999999998776 3222222 3334 88875 44444443
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.75 E-value=1e-08 Score=94.42 Aligned_cols=126 Identities=17% Similarity=0.212 Sum_probs=92.6
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.++++.|+++|+++.++|+.....+..+.+.+|+......+ +.+++ ....++.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i----~~~~~----------------~~~~Kp~ 141 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLI----VGGDT----------------FGEKKPS 141 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE----ECTTS----------------SCTTCCT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEE----EecCc----------------CCCCCCC
Confidence 357899999999999999999999999999999999999986432221 11110 0112345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeC--CCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMG--IAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg--~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
|+....+++.++..++++++|||+.||++|.+.||++ |++. .+..+. ..+|+++. +...+...++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~--~~~~~~~~--~~~el~~~l~~ 210 (222)
T 2nyv_A 142 PTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS--QIPDFTLS--RPSDLVKLMDN 210 (222)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC--CCCSEEES--STTHHHHHHHT
T ss_pred hHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc--cCCCEEEC--CHHHHHHHHHH
Confidence 6677888999999999999999999999999999977 5543 222222 56788775 45666666643
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=7.7e-09 Score=98.17 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=47.0
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCcceeeCC---CCcHHHHh---cccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGIAMGI---AGTEVAKE---ASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~igvamg~---~~~~~~k~---~ad~v~~~~~~~~i~~~i 230 (514)
.--..+++.++...+++++|||+ .||++|++.||+++++.+ ++.+..++ .||+++. +...+.+-+
T Consensus 187 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~--~~~el~~~~ 258 (266)
T 3pdw_A 187 IIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID--SLTEWIPYI 258 (266)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES--SGGGGHHHH
T ss_pred HHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC--CHHHHHHHh
Confidence 33477888999999999999999 799999999998665543 34455455 4999986 455566655
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.7e-08 Score=92.27 Aligned_cols=136 Identities=18% Similarity=0.128 Sum_probs=90.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCC---------------hHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDN---------------KNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
++.|++.++|++|+++|++++++|++. ...+....+.+|+. ...+.... ...+ ...
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~-~~~~--~~~---- 120 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCP-HHPQ--GSV---- 120 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEEC-CBTT--CSS----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECC-cCCC--Ccc----
Confidence 678999999999999999999999999 46777788888874 11111000 0000 000
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc----ceeeCCCCcHHHHhcccccccCCCch
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI----GIAMGIAGTEVAKEASDMVLADDDFS 224 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i----gvamg~~~~~~~k~~ad~v~~~~~~~ 224 (514)
-.........++.|+--..+++.++...+++++|||+.||+.+.+.||+ +|..|....+.....+|+++. +..
T Consensus 121 -~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l~ 197 (211)
T 2gmw_A 121 -EEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLA 197 (211)
T ss_dssp -GGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGG
T ss_pred -cccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CHH
Confidence 0000011123445666788889999999999999999999999999995 444453334444456888875 456
Q ss_pred hHHHHHH
Q 010234 225 TIVSAVG 231 (514)
Q Consensus 225 ~i~~~i~ 231 (514)
.+.+++.
T Consensus 198 el~~~l~ 204 (211)
T 2gmw_A 198 DLPQAIK 204 (211)
T ss_dssp GHHHHHH
T ss_pred HHHHHHH
Confidence 6666553
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.74 E-value=8.4e-09 Score=94.18 Aligned_cols=115 Identities=12% Similarity=0.121 Sum_probs=87.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+......+.... -..++.|
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~----------------------~~~Kp~p 140 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS----------------------PEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC----------------------SSCCSHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC----------------------CCCCCCh
Confidence 467999999999999 99999999999888888999999865433211000 0012345
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcHHHH-hcccccccCC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTEVAK-EASDMVLADD 221 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~~~k-~~ad~v~~~~ 221 (514)
+--..+++.++..++++++|||+.||+.|.+.||+ +|++|++..+..+ ..+|+++.+.
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~ 202 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKP 202 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESST
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCH
Confidence 55577888899999999999999999999999997 7888854344444 3689888653
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.1e-08 Score=94.70 Aligned_cols=126 Identities=10% Similarity=0.076 Sum_probs=86.9
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAA-GIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~-Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.+.|++.+.++.|+++ |+++.++|+.....+....+.+|+......+ ..+.+... .....
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~----~~~~~~~~---------------~~k~~ 153 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFG----AFADDALD---------------RNELP 153 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCE----ECTTTCSS---------------GGGHH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcc----eecCCCcC---------------ccchH
Confidence 4679999999999999 9999999999999999999988886533211 11111000 00011
Q ss_pred hhhHHHHHHHHh--hCCCEEEEEcCCcCCHHhhhhcC---cceeeCCCCcHHHHh-cccccccCCCchhHHHHH
Q 010234 163 PRHKQEIVRLLK--EDGEVVAMTGDGVNDAPALKLAD---IGIAMGIAGTEVAKE-ASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 163 p~~k~~iv~~l~--~~~~~v~~iGDg~ND~~ml~~A~---igvamg~~~~~~~k~-~ad~v~~~~~~~~i~~~i 230 (514)
|.-...+++.++ ..++++++|||+.||++|.+.|| ++|++|++..+..+. .||+++.+. ..+.+.+
T Consensus 154 ~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~--~el~~~l 225 (234)
T 2hcf_A 154 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNF--AETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCS--CCHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCH--HhHHHHH
Confidence 222366778888 78899999999999999999999 566666444444333 389888654 3344444
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.9e-08 Score=93.81 Aligned_cols=126 Identities=12% Similarity=0.104 Sum_probs=87.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccC--ccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN--EDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
.++.|++.+.++.|+++|++++++|+.....+....+. |+.... ..+ +.+++ .-..+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~----~~~~~----------------~~~~k 165 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLM----VTAFD----------------VKYGK 165 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGE----ECGGG----------------CSSCT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeE----Eeccc----------------CCCCC
Confidence 46789999999999999999999999998877777777 775432 111 11111 11123
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eee--CCCCcHH-HHhcccccccCCCchhHHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAM--GIAGTEV-AKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vam--g~~~~~~-~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+.|+--..+++.++..++++++|||+.||++|.+.||+. +.+ |....+. .+..||+++. +...+.++++
T Consensus 166 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 166 PNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 456667889999999999999999999999999999964 333 3222222 2347899985 4555655553
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.8e-08 Score=93.27 Aligned_cols=101 Identities=21% Similarity=0.145 Sum_probs=74.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe---
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR--- 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--- 160 (514)
.+.|++.+.++.|+++|++++++||.....+..+++.+|+....... +... +.....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~----~~~~---------------~~~~~g~~~~ 152 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATD----PEYR---------------DGRYTGRIEG 152 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECE----EEEE---------------TTEEEEEEES
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcc----eEEE---------------CCEEeeeecC
Confidence 47999999999999999999999999999999999999985311100 0000 0001111
Q ss_pred --cChhhHH----HHHHHHh---hCCCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 161 --AEPRHKQ----EIVRLLK---EDGEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 161 --~~p~~k~----~iv~~l~---~~~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
.....|. ++++.++ ...++++++||+.||++|++.||+++++.
T Consensus 153 ~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 153 TPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp SCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 1123443 4445556 66789999999999999999999999985
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.6e-08 Score=93.56 Aligned_cols=122 Identities=11% Similarity=0.103 Sum_probs=89.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.|++.+.++.|+++|++++++|+.....+....+.+|+......+.. .+ ..-..++.|
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~----~~----------------~~~~~Kp~~ 162 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIG----SG----------------DTGTIKPSP 162 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE----ET----------------SSSCCTTSS
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEc----cc----------------ccCCCCCCh
Confidence 4789999999999999999999999999999999999998653322110 00 001123445
Q ss_pred hhHHHHHHHHhhCCC-EEEEEcCCcCCHHhhhhcCc-ceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 164 RHKQEIVRLLKEDGE-VVAMTGDGVNDAPALKLADI-GIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~-~v~~iGDg~ND~~ml~~A~i-gvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+-...+++.++..++ ++++|||+.||++|.+.||+ +|.++ ++.+ ..+++++. ++..+.++++
T Consensus 163 ~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 163 EPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 666889999999998 99999999999999999996 77787 4433 23566653 5556665553
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.72 E-value=1.9e-08 Score=94.34 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=41.0
Q ss_pred hHHHHHHH-HhhCCCEEEEEcC----CcCCHHhhhhcCc-ceeeCCCCcHHHHhcccccc
Q 010234 165 HKQEIVRL-LKEDGEVVAMTGD----GVNDAPALKLADI-GIAMGIAGTEVAKEASDMVL 218 (514)
Q Consensus 165 ~k~~iv~~-l~~~~~~v~~iGD----g~ND~~ml~~A~i-gvamg~~~~~~~k~~ad~v~ 218 (514)
+|...++. ++...++|++||| +.||++||+.||. |++|| |+.+.+|+.||+|.
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLFS 246 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHCC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhcC
Confidence 34333333 3555789999999 9999999999998 99999 78888899999874
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.1e-08 Score=87.86 Aligned_cols=65 Identities=22% Similarity=0.216 Sum_probs=53.3
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEeccc
Q 010234 3 LLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLR 82 (514)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 82 (514)
..+|+..|++++.|+.+.+.+++|+++|+||||+|||.+++++.. ...+.|+||+|+|++|+-
T Consensus 101 ~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~-----------------~~~~~E~~L~f~G~~g~~ 163 (170)
T 3gwi_A 101 RHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD-----------------YQRADESDLILEGYIAFL 163 (170)
T ss_dssp EETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC-----------------CCGGGSCSEEEEEEEEEE
T ss_pred hcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc-----------------cCccccCCcEEEehhccc
Confidence 357889999999999999999999999999999999998653210 011348999999999997
Q ss_pred CC
Q 010234 83 DP 84 (514)
Q Consensus 83 ~~ 84 (514)
|.
T Consensus 164 ~~ 165 (170)
T 3gwi_A 164 DH 165 (170)
T ss_dssp C-
T ss_pred cc
Confidence 64
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.72 E-value=1.3e-08 Score=94.23 Aligned_cols=125 Identities=10% Similarity=0.066 Sum_probs=94.1
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.++++.|+ .|++++++|+.+........+.+|+......+. ..++ .-..++.
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~kp~ 164 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKII----LSED----------------LGVLKPR 164 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE----EGGG----------------TTCCTTS
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEE----Eecc----------------CCCCCCC
Confidence 357899999999999 999999999999999999999999865433221 1110 0012345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcceeeCCCCcH-HHHhcccccccCCCchhHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGIAMGIAGTE-VAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~igvamg~~~~~-~~k~~ad~v~~~~~~~~i~~~i 230 (514)
|+--..+++.++..++++++|||+. ||+.|.+.||++++|.+.+.. ..+..+|+++.+ ...+..+.
T Consensus 165 ~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~~ 232 (240)
T 3qnm_A 165 PEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNLL 232 (240)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHHT
T ss_pred HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHHH
Confidence 5666888999999999999999995 999999999999999966552 335678999864 44444443
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.72 E-value=1.3e-08 Score=95.15 Aligned_cols=118 Identities=19% Similarity=0.255 Sum_probs=87.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|+++|++++++|+.+...+..+.+.+|+......+ +.+++ ....+..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~----~~~~~----------------~~~~Kp~ 172 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEM----LGGQS----------------LPEIKPH 172 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE----ECTTT----------------SSSCTTS
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEE----Eeccc----------------CCCCCcC
Confidence 356799999999999999999999999999999999999986532221 11111 0112234
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee-e--CCC-CcHHHHhcccccccC
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA-M--GIA-GTEVAKEASDMVLAD 220 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva-m--g~~-~~~~~k~~ad~v~~~ 220 (514)
|+...++++.++..++++++|||+.||++|++.||++++ + |.+ +.+..+..||+++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~ 234 (243)
T 2hsz_A 173 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD 234 (243)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS
T ss_pred HHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC
Confidence 666788899999999999999999999999999998743 3 211 233446678988754
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.71 E-value=8.1e-08 Score=89.44 Aligned_cols=125 Identities=13% Similarity=0.148 Sum_probs=90.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+......+. .+++ .-..+..|
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~Kp~~ 153 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVI----ISDF----------------EGVKKPHP 153 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEE----EGGG----------------GTCCTTCH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEE----EeCC----------------CCCCCCCH
Confidence 578999999999999999999999999998999999999865332211 1110 00123455
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcceee---CCCCcHHHHh---cccccccCCCchhHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGIAM---GIAGTEVAKE---ASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~igvam---g~~~~~~~k~---~ad~v~~~~~~~~i~~~i~ 231 (514)
+--..+++.++..++++++|||+. ||++|.+.||++++. | .+.+.... .+|+++. +...+...++
T Consensus 154 ~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 154 KIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 666888899999999999999998 999999999986544 4 22232232 6788875 4555655553
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.71 E-value=1.6e-08 Score=95.27 Aligned_cols=131 Identities=14% Similarity=0.095 Sum_probs=95.7
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceE-EEe
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL-FSR 160 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~ 160 (514)
.-++.|++.+.++.|+++|++++++|+.....+....+.+|+....... .+.+++ .- ..+
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~---i~~~~~----------------~~~~~K 168 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEH---IYDPSW----------------VGGRGK 168 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSC---EECGGG----------------GTTCCT
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccce---EEeHhh----------------cCcCCC
Confidence 3457899999999999999999999999999999999999985422210 111111 01 223
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeCCC--C----c-HHHHhcccccccCCCchhHHHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMGIA--G----T-EVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg~~--~----~-~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..|+--..+++.++..++++++|||+.||+.|.+.||++ |.+... . . +..+..||+++. +...+.+.++.
T Consensus 169 p~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 169 PHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred CChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 456667889999999999999999999999999999998 444311 1 2 233455899885 67777777754
Q ss_pred h
Q 010234 233 G 233 (514)
Q Consensus 233 g 233 (514)
.
T Consensus 247 ~ 247 (259)
T 4eek_A 247 A 247 (259)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.71 E-value=1e-08 Score=94.94 Aligned_cols=125 Identities=11% Similarity=0.182 Sum_probs=91.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+......+. ..++ .-..++.|
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~Kp~~ 154 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLL----SVDP----------------VQVYKPDN 154 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE----ESGG----------------GTCCTTSH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEE----Eecc----------------cCCCCCCH
Confidence 467999999999999999999999999999999999999865332211 1110 01123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCC---CcHHHHhcccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIA---GTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~---~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+-...+++.++..++++++|||+.||+.|.+.||+++++-+. ..+..+..+|+++. +...+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 155 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 667788999999999999999999999999999999888322 22333556788774 344444443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.6e-08 Score=94.26 Aligned_cols=124 Identities=12% Similarity=0.216 Sum_probs=89.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+. ....+. .+++ .-..++.|
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~----~~~~----------------~~~~Kp~p 168 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFAL----GEKS----------------GIRRKPAP 168 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEE----EECT----------------TSCCTTSS
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEE----ecCC----------------CCCCCCCH
Confidence 35699999999999999999999999988888888888875 322211 1100 01123455
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc---eeeCCCCcHHHH-hcccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---IAMGIAGTEVAK-EASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig---vamg~~~~~~~k-~~ad~v~~~~~~~~i~~~i 230 (514)
+--..+++.++..++++++|||+.||+.|.+.||+. |++|+...+..+ ..||+++. +...+...+
T Consensus 169 ~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 169 DMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 666888999999999999999999999999999974 666643334334 36888875 344454444
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.8e-08 Score=93.89 Aligned_cols=124 Identities=13% Similarity=0.112 Sum_probs=91.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|++++++|+.+...+..+.+.+|+......+. ..++ .-..+..|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~Kp~~ 164 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCL----SADD----------------LKIYKPDP 164 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE----EGGG----------------TTCCTTSH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEE----Eccc----------------cCCCCCCH
Confidence 577999999999999999999999999999999999999865332211 1110 00123455
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc---eeeCCCCcHHHHhcc-cccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---IAMGIAGTEVAKEAS-DMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig---vamg~~~~~~~k~~a-d~v~~~~~~~~i~~~i 230 (514)
+-...+++.++..++++++|||+.||++|.+.||+. +..|+. .+..+..+ |+++. +...+...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGN-PPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCC-CCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCC-CCcccCCCCceeeC--CHHHHHHHH
Confidence 667888999999999999999999999999999954 444533 33334556 88775 455555554
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.3e-08 Score=97.21 Aligned_cols=118 Identities=13% Similarity=0.036 Sum_probs=87.9
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAA-GIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~-Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.+.|++.+.++.|++. |+++.++|+.....+....+.+|+.. .. ..+++++. -.....
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f~----~i~~~~~~----------------~~~kp~ 172 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-PE----YFITANDV----------------KQGKPH 172 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-CS----SEECGGGC----------------SSCTTS
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-cC----EEEEcccC----------------CCCCCC
Confidence 4579999999999999 99999999999999999998888752 11 11222210 011234
Q ss_pred hhhHHHHHHHHhh-------CCCEEEEEcCCcCCHHhhhhcCcceee---CCCCcHHHHhcccccccCCC
Q 010234 163 PRHKQEIVRLLKE-------DGEVVAMTGDGVNDAPALKLADIGIAM---GIAGTEVAKEASDMVLADDD 222 (514)
Q Consensus 163 p~~k~~iv~~l~~-------~~~~v~~iGDg~ND~~ml~~A~igvam---g~~~~~~~k~~ad~v~~~~~ 222 (514)
|+....+++.++. .++++++|||+.||++|++.||++++| |++..+..+..||+++.+.+
T Consensus 173 ~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~ 242 (275)
T 2qlt_A 173 PEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHE 242 (275)
T ss_dssp SHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGG
T ss_pred hHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChH
Confidence 6666888999998 899999999999999999999976655 64444443345899987654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.69 E-value=5.6e-09 Score=97.97 Aligned_cols=121 Identities=14% Similarity=0.123 Sum_probs=84.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH-cCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE-IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
..+.|++.+.++.|+++|+++.++|+...........+ .|+......+ +.+++ ...-..++
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~----~~~~~--------------~~~~~~Kp 172 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHI----VLGDD--------------PEVQHGKP 172 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCE----ECTTC--------------TTCCSCTT
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeE----Eecch--------------hhccCCCC
Confidence 46789999999999999999999999987666554322 3443222111 11100 01112234
Q ss_pred ChhhHHHHHHHHhhCC--CEEEEEcCCcCCHHhhhhcC---cceeeCCCCcHHHHhcccccccCCC
Q 010234 162 EPRHKQEIVRLLKEDG--EVVAMTGDGVNDAPALKLAD---IGIAMGIAGTEVAKEASDMVLADDD 222 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~--~~v~~iGDg~ND~~ml~~A~---igvamg~~~~~~~k~~ad~v~~~~~ 222 (514)
.|+--..+++.++... +++++|||+.||++|.+.|| ++|++|+. .+..+..||+++.+.+
T Consensus 173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~~~ad~v~~sl~ 237 (250)
T 3l5k_A 173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNL-SRDLTTKATLVLNSLQ 237 (250)
T ss_dssp STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTS-CGGGSTTSSEECSCGG
T ss_pred ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCC-chhhcccccEeecCHH
Confidence 5566688888888887 99999999999999999999 67777844 4446888999987543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.69 E-value=2e-08 Score=93.70 Aligned_cols=125 Identities=13% Similarity=0.168 Sum_probs=90.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccC--ccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN--EDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
.++.|++.+.++.|+++|+++.++|+.....+....+. |+.... ..+ +.+++ .-..+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i----~~~~~----------------~~~~k 166 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELM----VTAFD----------------VKYGK 166 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGE----ECTTT----------------CSSCT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceE----EeHHh----------------CCCCC
Confidence 35789999999999999999999999998887777777 775432 111 11111 11224
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeCCCCc---H-HHHhcccccccCCCchhHHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMGIAGT---E-VAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg~~~~---~-~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+.|+....+++.++..++++++|||+.||+.|.+.||++ |.+. ++. + ..+..||+++. +...+.++++
T Consensus 167 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 167 PNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred CChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 456677889999999999999999999999999999984 4444 322 2 22346899885 5566666553
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=7e-08 Score=90.39 Aligned_cols=52 Identities=21% Similarity=0.266 Sum_probs=40.0
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CcCCHHhhhhcC-cceeeCCCCcHHHHhcccc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGD----GVNDAPALKLAD-IGIAMGIAGTEVAKEASDM 216 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~A~-igvamg~~~~~~~k~~ad~ 216 (514)
.+|...++.+.+..+++++||| |.||++||+.|+ +|++|+ |+.+.+|..++.
T Consensus 186 v~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~ 242 (246)
T 3f9r_A 186 WDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKI 242 (246)
T ss_dssp CSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHH
Confidence 3455555555446789999999 699999999996 799999 777776766544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.65 E-value=5.8e-09 Score=94.94 Aligned_cols=117 Identities=10% Similarity=0.139 Sum_probs=87.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.+.++.|+++ +++.++|+.+...+..+.+.+|+...... .+.+++ .-..++.
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~----~~~~~~----------------~~~~KP~ 140 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAV----TISADD----------------TPKRKPD 140 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEE----EECGGG----------------SSCCTTS
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccE----EEecCc----------------CCCCCCC
Confidence 35689999999999999 99999999999989989888887542211 111111 0012334
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCC---CCcHHHHhcccccccCC
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGI---AGTEVAKEASDMVLADD 221 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~---~~~~~~k~~ad~v~~~~ 221 (514)
|+-..++++.++..++++++|||+.||++|.+.||++++|.+ .+.+..+. ||+++.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~ 201 (209)
T 2hdo_A 141 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKP 201 (209)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSG
T ss_pred cHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCH
Confidence 666688899999999999999999999999999999998753 23444455 89888643
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.64 E-value=3.4e-08 Score=93.77 Aligned_cols=67 Identities=24% Similarity=0.264 Sum_probs=49.6
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcC---cceeeCCCCcHHHH-------hcccccccCCCchhHHHHH
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLAD---IGIAMGIAGTEVAK-------EASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~---igvamg~~~~~~~k-------~~ad~v~~~~~~~~i~~~i 230 (514)
.|.--..+++.++...+++++|||+ .||+.|.+.|| ++|++|+...+... ..+|+++. +...+.+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~--~~~el~~~l 266 (268)
T 3qgm_A 189 SEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFN--SLKDMVEAL 266 (268)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEES--SHHHHHHTC
T ss_pred CHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEEC--CHHHHHHHH
Confidence 3455578888999999999999999 69999999999 78888855444322 16888875 444444443
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.63 E-value=5.1e-08 Score=90.22 Aligned_cols=127 Identities=13% Similarity=0.150 Sum_probs=93.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|++. +++.++|+.....+....+.+|+......+. ..++ .-..++.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~kp~ 160 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIF----VSED----------------TGFQKPM 160 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEE----EGGG----------------TTSCTTC
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEE----Eecc----------------cCCCCCC
Confidence 35789999999999999 9999999999999999999998865432211 1110 0012345
Q ss_pred hhhHHHHHHHHh-hCCCEEEEEcCCc-CCHHhhhhcCcceeeCCCC--cHHHHhcccccccCCCchhHHHHHHH
Q 010234 163 PRHKQEIVRLLK-EDGEVVAMTGDGV-NDAPALKLADIGIAMGIAG--TEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 163 p~~k~~iv~~l~-~~~~~v~~iGDg~-ND~~ml~~A~igvamg~~~--~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
|+--..+++.++ ..++++++|||+. ||+.|.+.||++.++-+.+ .+..+..||+++. +...+.++++.
T Consensus 161 ~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~~ 232 (238)
T 3ed5_A 161 KEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILNI 232 (238)
T ss_dssp HHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHTC
T ss_pred hHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHHh
Confidence 566678888998 8899999999998 9999999999854332233 4445677899985 56667776643
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.59 E-value=5.7e-08 Score=91.29 Aligned_cols=100 Identities=10% Similarity=0.122 Sum_probs=79.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+......+. ..++ .-..+..|
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~----~~~~----------------~~~~Kp~~ 150 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVI----SVDA----------------KRVFKPHP 150 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEE----EGGG----------------GTCCTTSH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEE----Eccc----------------cCCCCCCH
Confidence 57899999999998 99999999999999999999999865332211 1111 00123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIA 205 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~ 205 (514)
+-...+++.++..++++++|||+.||+.|.+.||+++++.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 667888999999999999999999999999999999988754
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-07 Score=86.61 Aligned_cols=125 Identities=11% Similarity=0.149 Sum_probs=88.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccC-ccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECN-EDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.++.+++.+.++.++. +++++|+........+.+.+|+.... ..+ ..++.. .. . -...
T Consensus 86 ~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~----~~~~~~----------~~--~--~~kp 144 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHI----YSAKDL----------GA--D--RVKP 144 (229)
T ss_dssp CCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCE----EEHHHH----------CT--T--CCTT
T ss_pred CccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceE----Eecccc----------cc--C--CCCc
Confidence 3567888888887764 99999999999999999999886432 211 111110 00 0 0023
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeCCCCc------HHHHhc-ccccccCCCchhHHHHH
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMGIAGT------EVAKEA-SDMVLADDDFSTIVSAV 230 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg~~~~------~~~k~~-ad~v~~~~~~~~i~~~i 230 (514)
.|+....+++.++..++++++|||+.||++|++.||++ +++++... +.+++. ||+++.+ ...+.+.+
T Consensus 145 k~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l 219 (229)
T 2fdr_A 145 KPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR--MQDLPAVI 219 (229)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred CHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecC--HHHHHHHH
Confidence 45666889999999999999999999999999999998 66663322 235666 9999864 44455555
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.56 E-value=1.1e-07 Score=84.84 Aligned_cols=107 Identities=13% Similarity=0.082 Sum_probs=77.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.|++.+.++.|+++|++++++|+... .+....+.+|+...... .+.+++ .-...+.|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~----~~~~~~----------------~~~~kp~~ 140 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTE----VVTSSS----------------GFKRKPNP 140 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEE----EECGGG----------------CCCCTTSC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheee----eeeccc----------------cCCCCCCH
Confidence 3679999999999999999999999864 56777888887542211 111111 01123345
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEAS 214 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~a 214 (514)
+....+++.++.. ++++|||+.||++|++.||+++++.+++.+ .++..
T Consensus 141 ~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~-~~~~l 188 (190)
T 2fi1_A 141 ESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVN-LRQVL 188 (190)
T ss_dssp HHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHH-HHHHH
T ss_pred HHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCC-hhhcc
Confidence 6667888888877 899999999999999999999988744443 34443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.6e-07 Score=84.34 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=92.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+......+ +..++ .-..++.|
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~----~~~~~----------------~~~~KP~p 143 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVM----VFGDQ----------------VKNGKPDP 143 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE----ECGGG----------------SSSCTTST
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccccc----ccccc----------------cCCCcccH
Confidence 56799999999999999999999999999999999999987643322 11111 11235567
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc----eeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG----IAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig----vamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+--..+++.++..++++++|||+.+|+.+-+.||+. +.-|.+..+..+++.+..+. +.+.+.+.++
T Consensus 144 ~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~~l~ 213 (216)
T 3kbb_A 144 EIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred HHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHHHHH
Confidence 777899999999999999999999999999999974 33444444554555433333 2345555553
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.1e-07 Score=87.59 Aligned_cols=120 Identities=17% Similarity=0.228 Sum_probs=80.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec-
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA- 161 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~- 161 (514)
-++.|++.++++.|+++|++++++|+.+...+..+.+.+|+... .+....+.-. ....+.+..
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~~~~~~--------------~~~~~~~~~~ 148 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKFY--------------FNGEYAGFDE 148 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEEC--------------TTSCEEEECT
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEeeeEEEc--------------CCCcEecCCC
Confidence 36889999999999999999999999999999999999998631 0000000000 000011111
Q ss_pred -----ChhhHHHHH----HHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCC-cHHHHhcccccccC
Q 010234 162 -----EPRHKQEIV----RLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAG-TEVAKEASDMVLAD 220 (514)
Q Consensus 162 -----~p~~k~~iv----~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~-~~~~k~~ad~v~~~ 220 (514)
.+..|.+++ +.++. +++++|||+.||+++.+.||++|+++... .+.....+|+++.+
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~ 215 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 215 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred CCcccCCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC
Confidence 112343333 33333 78999999999999999999998887432 33445568888754
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.55 E-value=7.1e-08 Score=90.11 Aligned_cols=124 Identities=10% Similarity=0.116 Sum_probs=93.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|++. +++.++|+........+.+.+|+. .. ..+..+.. ......|
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~----~~~~~~~~----------------~~~kp~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WD----VIIGSDIN----------------RKYKPDP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CS----CCCCHHHH----------------TCCTTSH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--ee----EEEEcCcC----------------CCCCCCH
Confidence 5679999999999997 999999999999999999999884 11 11222211 1123446
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcH-------H--HHhcccccccCCCchhHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTE-------V--AKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~-------~--~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
+--..+++.++...+++++|||+.||+.|.+.||++++|.+...+ . .+..+|+++. +...+..++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhcC
Confidence 667888999999999999999999999999999999999852211 1 2556788874 66677776643
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.54 E-value=6.5e-08 Score=87.37 Aligned_cols=121 Identities=9% Similarity=0.122 Sum_probs=87.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+ ++.|+++ +++.++|+.+...+..+.+.+|+......+. .+++ .-..++.|
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~----~~~~----------------~~~~Kp~~ 131 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIF----SAES----------------VKEYKPSP 131 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEE----EGGG----------------GTCCTTCH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEE----ehhh----------------cCCCCCCH
Confidence 56799999 9999999 9999999999999999999999865332211 1111 00123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCC---CCcHHHHhcccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGI---AGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~---~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+-...+++.++ ++++++|||+.||+.|.+.||+++++-+ ++.+..+..+|+++. +...+.+.+
T Consensus 132 ~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 197 (201)
T 2w43_A 132 KVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 66678888888 8899999999999999999999877721 222333456788774 445555544
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.54 E-value=4.5e-07 Score=84.85 Aligned_cols=121 Identities=17% Similarity=0.129 Sum_probs=88.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
..+.|++.+.++.|+ .|+++.++|+.....+....+.+|+......+ ....+..
T Consensus 111 ~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i-------------------------~~~~kp~ 164 (251)
T 2pke_A 111 VEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRI-------------------------EVVSEKD 164 (251)
T ss_dssp CCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCE-------------------------EEESCCS
T ss_pred CCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCcee-------------------------eeeCCCC
Confidence 356899999999999 99999999999988888888888886432211 0112345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcceeeCCCCcH--------HHHhcccc-cccCCCchhHHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGIAMGIAGTE--------VAKEASDM-VLADDDFSTIVSAVG 231 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~igvamg~~~~~--------~~k~~ad~-v~~~~~~~~i~~~i~ 231 (514)
|+.-..+++.++..++++++|||+. ||+.|.+.||+++++=..+.. .....+|+ ++. +...+..+++
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHHH
Confidence 6667888999999999999999999 999999999998776423221 11234676 554 4556666553
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.54 E-value=3e-08 Score=92.95 Aligned_cols=122 Identities=15% Similarity=0.172 Sum_probs=91.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|++. ++++++|+........+.+.+|+. .. ..+..+.. -...+.|
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~----~~~~~~~~----------------~~~kp~~ 176 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WD----MLLCADLF----------------GHYKPDP 176 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CS----EECCHHHH----------------TCCTTSH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cc----eEEeeccc----------------ccCCCCH
Confidence 4579999999999885 999999999999999999999884 11 11222110 1123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCC----CCc---HHH--HhcccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGI----AGT---EVA--KEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~----~~~---~~~--k~~ad~v~~~~~~~~i~~~i 230 (514)
+--..+++.++..++++++|||+.||++|.+.||++++|.+ .+. +.. +..||+++. +...+.+++
T Consensus 177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l 250 (254)
T 3umc_A 177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQL 250 (254)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHh
Confidence 66788999999999999999999999999999999999985 222 222 567888885 556666655
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.53 E-value=7.7e-08 Score=86.08 Aligned_cols=94 Identities=7% Similarity=0.043 Sum_probs=73.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCC-hHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDN-KNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.++.|++.++|++|+++|++++++||++ ...+..+.+.+|+......+. +....
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~-------------------------~~~~~ 121 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHRE-------------------------IYPGS 121 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEE-------------------------ESSSC
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeE-------------------------EEeCc
Confidence 3678999999999999999999999999 699999999999864322110 11112
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
.|+...++++.++..++++++|||+.+|+.+.+.||+.+.
T Consensus 122 k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 122 KITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 2344567778888888999999999999999999997543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.51 E-value=8.6e-08 Score=90.74 Aligned_cols=125 Identities=20% Similarity=0.334 Sum_probs=92.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|++++++|+.... ...+.+.+|+......+ +.+.+. -..++.|
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~----~~~~~~----------------~~~Kp~~ 164 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFV----LTSEAA----------------GWPKPDP 164 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCE----EEHHHH----------------SSCTTSH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEE----Eeeccc----------------CCCCCCH
Confidence 36799999999999999999999997764 68888889986543221 111110 1124556
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcceeeCCCCcHH-----HHhcccccccCCCchhHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGIAMGIAGTEV-----AKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~igvamg~~~~~~-----~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+-...+++.++..++++++|||+. ||+.|.+.||+++++.+.+... ....||+++. +...+..+++
T Consensus 165 ~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~ 236 (263)
T 3k1z_A 165 RIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHH
Confidence 777889999999999999999997 9999999999999988554321 2236888885 5566666554
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.6e-07 Score=86.82 Aligned_cols=123 Identities=11% Similarity=0.116 Sum_probs=86.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|++ |++++++|+.+........+.++- ... ..+...+. -..+++|
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~--~fd----~i~~~~~~----------------~~~KP~~ 155 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV--EFD----HIITAQDV----------------GSYKPNP 155 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS--CCS----EEEEHHHH----------------TSCTTSH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC--ccC----EEEEcccc----------------CCCCCCH
Confidence 678999999999999 899999999998888777665442 111 11111111 0123345
Q ss_pred hhHHHH---HHHHhhCCCEEEEEcCCc-CCHHhhhhcCcceeeCCCC----------cHHHHhcccccccCCCchhHHHH
Q 010234 164 RHKQEI---VRLLKEDGEVVAMTGDGV-NDAPALKLADIGIAMGIAG----------TEVAKEASDMVLADDDFSTIVSA 229 (514)
Q Consensus 164 ~~k~~i---v~~l~~~~~~v~~iGDg~-ND~~ml~~A~igvamg~~~----------~~~~k~~ad~v~~~~~~~~i~~~ 229 (514)
+-...+ ++.++..++++++|||+. ||+.|.+.||++++|.+.+ .+..+..||+++. +...+.+.
T Consensus 156 ~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~~ 233 (240)
T 3smv_A 156 NNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAEA 233 (240)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHHH
Confidence 544455 778888999999999996 9999999999999996432 2333577899885 45556665
Q ss_pred HH
Q 010234 230 VG 231 (514)
Q Consensus 230 i~ 231 (514)
++
T Consensus 234 l~ 235 (240)
T 3smv_A 234 HK 235 (240)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.49 E-value=2.1e-07 Score=86.52 Aligned_cols=141 Identities=20% Similarity=0.188 Sum_probs=89.1
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.-++.|++.++|+.|+++|++++++|+.+...+..+.+ |+... ..+......... ..+.. .........+.+.
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~-~~~~~---~~~kp~p~~~~~~ 147 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN-DYIHI---DWPHSCKGTCSNQ 147 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS-SBCEE---ECTTCCCTTCCSC
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC-CceEE---ecCCCCccccccc
Confidence 35789999999999999999999999999988888887 66432 222111000000 00000 0000000000000
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhc--ccccccCCCchhHHHHHHH
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEA--SDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~--ad~v~~~~~~~~i~~~i~~ 232 (514)
....|.++++.++..++++++|||+.||+++.+.||+.++.. ...+..+.. +|+++ .+...+...+.+
T Consensus 148 ~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 148 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred cCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 133577899999999999999999999999999999988753 222333333 67666 356667766644
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.47 E-value=4e-07 Score=81.54 Aligned_cols=133 Identities=13% Similarity=0.140 Sum_probs=93.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCCh---HHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNK---NTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
++.|++.+++++|+++|++++++|+.+. ..+..+.+.+|+......+.. ..+.. ...-..+
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~----~~~~~------------~~~~~~K 97 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYA----SNSEL------------QPGKMEK 97 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEE----CCTTS------------STTCCCT
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEE----ccccc------------cccCCCC
Confidence 5889999999999999999999999876 888999999998653322110 00000 0001224
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCccee-eCCCCc----HHHH-hcccccccCCCchhHHHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGIA-MGIAGT----EVAK-EASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~igva-mg~~~~----~~~k-~~ad~v~~~~~~~~i~~~i~~ 232 (514)
+.|+--..+++.++..++++++|||+ .+|+.+.+.||+... +..... +... ..+|+++.+.+...+.++++-
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l 176 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLL 176 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHH
Confidence 45666788899999999999999999 799999999997533 331111 1111 257888876677777777654
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.44 E-value=2.2e-07 Score=88.03 Aligned_cols=57 Identities=21% Similarity=0.239 Sum_probs=43.0
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcC---cceeeCCCCcHHHHh---cccccccC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLAD---IGIAMGIAGTEVAKE---ASDMVLAD 220 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~---igvamg~~~~~~~k~---~ad~v~~~ 220 (514)
.--..+++.++...+++++|||+ .||+.|.+.|| ++|..|....+..+. .+|+++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~ 249 (264)
T 3epr_A 186 IIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLAS 249 (264)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESC
T ss_pred HHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECC
Confidence 33577888899999999999999 79999999999 455556444444333 57888754
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.43 E-value=2.5e-07 Score=83.23 Aligned_cols=104 Identities=16% Similarity=0.185 Sum_probs=81.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++| +++++|+.+........+.+|+......+ +.+.+. -..++.|
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~----~~~~~~----------------~~~Kp~~ 144 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAF----FTSSAL----------------GVMKPNP 144 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCE----EEHHHH----------------SCCTTCH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceE----Eeeccc----------------CCCCCCH
Confidence 47899999999999999 99999999999999999999986533221 111110 1123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTE 208 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~ 208 (514)
+-...+++.++..++++++|||+.||++|.+.||+.+++-+.+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 145 AMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence 667788899999999999999999999999999999887644433
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.9e-08 Score=87.76 Aligned_cols=104 Identities=10% Similarity=0.042 Sum_probs=79.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH------cCCcccCccceecccChHHHhhhhHHHHHHhhcCceE
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE------IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL 157 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 157 (514)
++.|++.+.++.|++ |++++++|+.....+..+.+. .|+......+ +...+. -
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~----~~~~~~----------------~ 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKV----YASCQM----------------G 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEE----EEHHHH----------------T
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeE----Eeeccc----------------C
Confidence 467999999999999 999999999998888887776 5664432211 111110 0
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcH
Q 010234 158 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTE 208 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~ 208 (514)
..++.|+-...+++.++..++++++|||+.||++|.+.||+++++.+.+.+
T Consensus 148 ~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~ 198 (211)
T 2i6x_A 148 KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGEN 198 (211)
T ss_dssp CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHH
Confidence 123456667888999999999999999999999999999999999855543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=6.3e-07 Score=84.99 Aligned_cols=42 Identities=17% Similarity=0.108 Sum_probs=38.0
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEC---CCChHHHHHHHHHcCCc
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVIT---GDNKNTAEAICREIGVF 124 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~T---G~~~~~a~~ia~~~gi~ 124 (514)
+++.+++.++|++|+++|++++++| ||+........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5678999999999999999999999 89998888888888874
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.38 E-value=1.4e-07 Score=86.56 Aligned_cols=108 Identities=22% Similarity=0.168 Sum_probs=74.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCCh---------------HHHHHHHHHcCCcccCccceecccChHHHhhhhHHH
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNK---------------NTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKK 147 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 147 (514)
.++.|++.++|++|+++|++++++|+++. ..+....+.+|+.- ..+....... . ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~--~~~~~~~~~~-~-g~~~--- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV--DMVLACAYHE-A-GVGP--- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCC--SEEEEECCCT-T-CCST---
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCce--eeEEEeecCC-C-Ccee---
Confidence 56889999999999999999999999987 67788888888631 1110000000 0 0000
Q ss_pred HHHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 148 AHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 148 ~~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
.........++.|.--..+++.++...+++++|||+.||+.|.+.||+..
T Consensus 128 ---~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 ---LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp ---TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ---ecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00001111234455667788899999999999999999999999999764
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.33 E-value=3.9e-07 Score=90.73 Aligned_cols=105 Identities=13% Similarity=0.163 Sum_probs=71.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc--CccceecccChHHHhhhhHHHHHHhhcCceEEEe-
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC--NEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR- 160 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~- 160 (514)
++.|++++.|+.|+++|++++|+||.....++.+++++|+... ...+....+.- ..+..+-.+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~--------------~~dG~~tg~~ 286 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMK--------------DDEGKILPKF 286 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEE--------------CTTCCEEEEE
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEE--------------ecCCceeeee
Confidence 4789999999999999999999999999999999999987431 11111111000 001111111
Q ss_pred ------cChhhHHHHHHHHhh---CCCEEEEEcCCcCCHHhhhh-cCcceee
Q 010234 161 ------AEPRHKQEIVRLLKE---DGEVVAMTGDGVNDAPALKL-ADIGIAM 202 (514)
Q Consensus 161 ------~~p~~k~~iv~~l~~---~~~~v~~iGDg~ND~~ml~~-A~igvam 202 (514)
+..+.|.+.++.+-. ....++++|||.||++||+. +|.++.+
T Consensus 287 ~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 287 DKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp CTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred cCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 234678888877632 23568999999999999996 4444443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.4e-07 Score=77.77 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=75.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+++++|+++|++++++|+++...+..+.+.+|+......+ +...+. -..++.|
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i----~~~~~~----------------~~~Kp~~ 77 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKV----LLSGEL----------------GVEKPEE 77 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEE----EEHHHH----------------SCCTTSH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEE----EEeccC----------------CCCCCCH
Confidence 46789999999999999999999999988888888888875432221 111110 0123455
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceee
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAM 202 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvam 202 (514)
+--..+++.++..++++++|||+.+|+.+.+.+|+....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~ 116 (137)
T 2pr7_A 78 AAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVY 116 (137)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEE
Confidence 666778888888889999999999999999999975433
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.32 E-value=8.3e-07 Score=82.43 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCcc---eeeCCCCcHHHH---hcccccccC
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIG---IAMGIAGTEVAK---EASDMVLAD 220 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~ig---vamg~~~~~~~k---~~ad~v~~~ 220 (514)
|..-..+++.++...+++++|||+ .||++|++.||++ |++|+...+..+ ..||+++.+
T Consensus 179 ~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 179 PWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred HHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 344477888889999999999999 7999999999987 455644434434 468888764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.2e-07 Score=85.77 Aligned_cols=106 Identities=15% Similarity=0.156 Sum_probs=74.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH-cCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE-IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.|++.+.++.|+++|++++++|+.+......+.+. +|+...... .+.+.+. -..++.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~----~~~~~~~----------------~~~Kp~ 150 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADH----IYLSQDL----------------GMRKPE 150 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSE----EEEHHHH----------------TCCTTC
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheee----EEEeccc----------------CCCCCC
Confidence 4679999999999999999999999875544333322 333211111 0111100 012345
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEV 209 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~ 209 (514)
|+-...+++.++..++++++|||+.||++|.+.||+.+++.+.+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~ 197 (206)
T 2b0c_A 151 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTI 197 (206)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence 56678889999999999999999999999999999998887555543
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.21 E-value=7e-06 Score=77.28 Aligned_cols=41 Identities=10% Similarity=0.120 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEC---CCChHHHHHHHHHcCCc
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVIT---GDNKNTAEAICREIGVF 124 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~T---G~~~~~a~~ia~~~gi~ 124 (514)
.+.+++.++++.+++.|++++++| ||+........+++|+.
T Consensus 32 ~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 32 TAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp EECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 366889999999999999999999 99999888888888774
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=98.21 E-value=3.3e-06 Score=79.58 Aligned_cols=124 Identities=14% Similarity=0.170 Sum_probs=89.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|++ |+++.++|+.+...+....+.+|+......+. .+++ .-..++.|
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~----~~~~----------------~~~~KP~p 179 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIV----IGGE----------------QKEEKPAP 179 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE----EGGG----------------SSSCTTCH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEE----ecCC----------------CCCCCCCH
Confidence 678999999999987 69999999999999999999999865433211 1111 01134556
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCc--ceeeCCCCcH--HHHhcccccccCCCchhHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADI--GIAMGIAGTE--VAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~i--gvamg~~~~~--~~k~~ad~v~~~~~~~~i~~~i 230 (514)
+--..+++.++..++++++|||+ .||+.+.+.||+ +|.++....+ .....+|+++. +...+...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 180 SIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 67788899999999999999995 999999999999 5777532221 12345777765 345555544
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-06 Score=80.62 Aligned_cols=119 Identities=18% Similarity=0.208 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|++. ++++++|+.+.. .+.+|+......+ +..++. -..++.|
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~----~~~~~~----------------~~~kp~~ 158 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFA----LCAEDL----------------GIGKPDP 158 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEE----EEHHHH----------------TCCTTSH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeee----EEcccc----------------CCCCcCH
Confidence 4789999999999998 999999988754 3445554322211 111110 0123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcceee---CCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGIAM---GIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~igvam---g~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
+--..+++.++..++++++|||+. ||+.|.+.||+++++ |.+..+. +..+|+++. +...+.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 159 APFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 677889999999999999999997 999999999998777 2222223 566788875 5566666653
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=98.16 E-value=9.9e-07 Score=81.30 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=78.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHH------HHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceE
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAIC------REIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL 157 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia------~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 157 (514)
++.|++.++++.|++. ++++++|+.+......+. +..|+......+ +...+ .-
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i----~~~~~----------------~~ 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKT----YLSYE----------------MK 170 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEE----EEHHH----------------HT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEE----Eeecc----------------cC
Confidence 4679999999999998 999999999988888666 344543321111 11111 01
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcH
Q 010234 158 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTE 208 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~ 208 (514)
..++.|+--..+++.++..++++++|||+.||+.|.+.||+++++.+.+.+
T Consensus 171 ~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (229)
T 4dcc_A 171 MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGED 221 (229)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence 224566777899999999999999999999999999999999998855443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=98.10 E-value=3.6e-06 Score=83.48 Aligned_cols=138 Identities=16% Similarity=0.223 Sum_probs=89.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+...... ...+++++.....+ .. ....-..++.|
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~--~~Ivs~ddv~~~~~---~~--~~~kp~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA--DFIATASDVLEAEN---MY--PQARPLGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCG--GGEECHHHHHHHHH---HS--TTSCCCCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCC--CEEEeccccccccc---cc--ccccCCCCCCH
Confidence 5789999999999999999999999999999999999998654320 01233333211000 00 00001134556
Q ss_pred hhHHHHHHHHh--------------hCCCEEEEEcCCcCCHHhhhhcCcc-eee--CCCC---cHHH-HhcccccccCCC
Q 010234 164 RHKQEIVRLLK--------------EDGEVVAMTGDGVNDAPALKLADIG-IAM--GIAG---TEVA-KEASDMVLADDD 222 (514)
Q Consensus 164 ~~k~~iv~~l~--------------~~~~~v~~iGDg~ND~~ml~~A~ig-vam--g~~~---~~~~-k~~ad~v~~~~~ 222 (514)
+--..+++.++ ..++++++|||+.+|+.+.++||+. |.+ |..+ .+.. ...||+++. +
T Consensus 288 ~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~--s 365 (384)
T 1qyi_A 288 FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--H 365 (384)
T ss_dssp HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--S
T ss_pred HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEEC--C
Confidence 55566666666 5678999999999999999999965 333 3211 1222 335888875 4
Q ss_pred chhHHHHH
Q 010234 223 FSTIVSAV 230 (514)
Q Consensus 223 ~~~i~~~i 230 (514)
...+...+
T Consensus 366 l~eL~~~l 373 (384)
T 1qyi_A 366 LGELRGVL 373 (384)
T ss_dssp GGGHHHHH
T ss_pred HHHHHHHH
Confidence 55555555
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.10 E-value=5.5e-06 Score=77.53 Aligned_cols=115 Identities=10% Similarity=0.137 Sum_probs=86.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|+++.++|+... +....+.+|+......+ +++++ .-..++.|
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~Fd~i----~~~~~----------------~~~~KP~p 173 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKFDFI----ADAGK----------------CKNNKPHP 173 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGCSEE----CCGGG----------------CCSCTTSS
T ss_pred ccchhHHHHHHHHHhcccccccccccch--hhhHhhhccccccccee----ecccc----------------cCCCCCcH
Confidence 4789999999999999999999887653 55677888987644322 22221 12235677
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceeeCCCCcHHHHhcccccccCCCc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAMGIAGTEVAKEASDMVLADDDF 223 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvamg~~~~~~~k~~ad~v~~~~~~ 223 (514)
+--..+++.++..++++++|||+.+|+.+-+.||+ .|+++ +..+ ...||+++.+.+.
T Consensus 174 ~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~~l~e 231 (250)
T 4gib_A 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVDSTNQ 231 (250)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEESSGGG
T ss_pred HHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEECChHh
Confidence 78889999999999999999999999999999997 55565 3322 2358998876543
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.05 E-value=6e-06 Score=74.25 Aligned_cols=90 Identities=9% Similarity=-0.016 Sum_probs=65.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++||.....+..+.. ..+ ..+ +.++ ..-..++.|
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~----d~v----~~~~----------------~~~~~KP~p 90 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVN----DWM----IAAP----------------RPTAGWPQP 90 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTT----TTC----EECC----------------CCSSCTTST
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccC----CEE----EECC----------------cCCCCCCCh
Confidence 578999999999999999999999998877755443 100 000 0000 011223456
Q ss_pred hhHHHHHHHHhhCC-CEEEEEcCCcCCHHhhhhcCc
Q 010234 164 RHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLADI 198 (514)
Q Consensus 164 ~~k~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~i 198 (514)
+--...++.++... +++++|||+.+|+.+-+.||+
T Consensus 91 ~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~ 126 (196)
T 2oda_A 91 DACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGL 126 (196)
T ss_dssp HHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCC
Confidence 66677888888764 889999999999999999995
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=2.1e-05 Score=75.95 Aligned_cols=42 Identities=10% Similarity=0.112 Sum_probs=35.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEC---CCChHHHHHHHHHcCCc
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVIT---GDNKNTAEAICREIGVF 124 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~T---G~~~~~a~~ia~~~gi~ 124 (514)
+++.+++.+++++|+++|++++++| ||+........+.+|+.
T Consensus 36 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 36 ERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 3567889999999999999999999 57777777777788875
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=3.1e-06 Score=74.69 Aligned_cols=103 Identities=14% Similarity=0.108 Sum_probs=68.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCC---------------ChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGD---------------NKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
++.|++.++|+.|+++|++++++|+. ....+..+.+.+|+. ...+ ..++...
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v---~~s~~~~-------- 108 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEV---LICPHLP-------- 108 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEE---EEECCCG--------
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEE---EEcCCCC--------
Confidence 57899999999999999999999998 456777888888875 1111 0000000
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeC
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMG 203 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg 203 (514)
....-..++.|+--..+++.++..++++++|||+.+|+.+.+.||+. |.+.
T Consensus 109 ----~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 109 ----ADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp ----GGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred ----cccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 00001112344445666778888889999999999999999999985 4443
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=97.87 E-value=5e-05 Score=70.98 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=32.8
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEEC---CCChHHHHHHHHHcCCcc
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVIT---GDNKNTAEAICREIGVFE 125 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~T---G~~~~~a~~ia~~~gi~~ 125 (514)
.++.-+++.++++.++++|++++++| |+.........+.+|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 44555788999999999999999999 666666666666777643
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=97.79 E-value=4.8e-05 Score=71.61 Aligned_cols=116 Identities=12% Similarity=0.125 Sum_probs=83.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc---CCcccCccceecccChHHHhhhhHHHHHHhhcCceEEE
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI---GVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFS 159 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (514)
-++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+......+ +.. + . - .
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i----~~~-~---------------~-~-~ 186 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGH----FDT-K---------------I-G-H 186 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEE----ECG-G---------------G-C-C
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEE----Eec-C---------------C-C-C
Confidence 367899999999999999999999999988888877754 464432221 111 1 1 1 4
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeCC--CCc-HHHHhcccccccC
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMGI--AGT-EVAKEASDMVLAD 220 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg~--~~~-~~~k~~ad~v~~~ 220 (514)
++.|+--..+++.++..++++++|||+.+|+.+-+.||+. |.+.. ... +.....+|+++.+
T Consensus 187 KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 187 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp TTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred CCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 5667777889999999999999999999999999999964 33321 111 2223446776654
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.76 E-value=2.3e-05 Score=72.85 Aligned_cols=98 Identities=15% Similarity=0.107 Sum_probs=75.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|+++.++|++.. +..+.+.+|+......+ +.+++ .-..++.|
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i----~~~~~----------------~~~~KP~p 152 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFC----ADASQ----------------LKNSKPDP 152 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEE----CCGGG----------------CSSCTTST
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccc----ccccc----------------ccCCCCcH
Confidence 4679999999999999999999998754 45667888886543321 12111 11235667
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceeeC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAMG 203 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvamg 203 (514)
+--..+++.++..++++++|||+.+|+.+-++||+ .|+++
T Consensus 153 ~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 153 EIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 77789999999999999999999999999999995 34444
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.76 E-value=1.4e-05 Score=75.26 Aligned_cols=60 Identities=17% Similarity=0.195 Sum_probs=44.0
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCcc---eeeCCCCcHHHHh---cccccccC
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIG---IAMGIAGTEVAKE---ASDMVLAD 220 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~ig---vamg~~~~~~~k~---~ad~v~~~ 220 (514)
+.|+--..+++.++..++++++|||+ .||+.+.+.||+. |..|....+..++ .+|+++.+
T Consensus 184 P~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 184 PKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp TSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 34455577888888889999999999 6999999999976 5556433323333 57888754
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=97.75 E-value=4.8e-05 Score=70.01 Aligned_cols=110 Identities=10% Similarity=0.057 Sum_probs=73.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
-++.|++.++++.|+++| ++.++|+.+...+....+.+|+......+ .......
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~-------------------------~~~~~~K 148 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGR-------------------------VLIYIHK 148 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTC-------------------------EEEESSG
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCee-------------------------EEecCCh
Confidence 357899999999999999 99999999999999999999885322111 0111112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcC---CHHhhhhcCcc---eeeCCC--CcHHHHhc--ccccccC
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVN---DAPALKLADIG---IAMGIA--GTEVAKEA--SDMVLAD 220 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~N---D~~ml~~A~ig---vamg~~--~~~~~k~~--ad~v~~~ 220 (514)
|.-...+.+ +..++++++|||+.+ |+.+-+.||+. +..|.. ..+..++. +|+++.+
T Consensus 149 ~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~ 214 (231)
T 2p11_A 149 ELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVER 214 (231)
T ss_dssp GGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESS
T ss_pred HHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecC
Confidence 322333333 567899999999999 77777788853 333311 22333443 7888754
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.68 E-value=4e-05 Score=71.22 Aligned_cols=85 Identities=13% Similarity=0.209 Sum_probs=65.0
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChH----HHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceE
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKN----TAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL 157 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 157 (514)
+.++.|++.+.++.|+++|++++++|||+.. .+..-.+++|+..... ..+
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~--------------------------~~L 152 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND--------------------------KTL 152 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST--------------------------TTE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc--------------------------cee
Confidence 3567899999999999999999999999764 7777788899864221 124
Q ss_pred EEecChhhHHHHHHHHhh-CCCEEEEEcCCcCCHHh
Q 010234 158 FSRAEPRHKQEIVRLLKE-DGEVVAMTGDGVNDAPA 192 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l~~-~~~~v~~iGDg~ND~~m 192 (514)
+.+.....|....+.+.. ....+++|||..+|++.
T Consensus 153 ilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 153 LLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred EecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 444444567777777776 45668899999999987
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.65 E-value=3.8e-05 Score=70.08 Aligned_cols=94 Identities=9% Similarity=0.098 Sum_probs=67.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|++++++|+.+. .+....+.+|+......+ +..++ .-..++.|
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~----~~~~~----------------~~~~Kp~~ 153 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDAL----ALSYE----------------IKAVKPNP 153 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEE----C---------------------------C
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEE----Eeccc----------------cCCCCCCH
Confidence 4679999999999999999999999866 578888888986533221 11111 11234556
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcC-CHHhhhhcCccee
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVN-DAPALKLADIGIA 201 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~N-D~~ml~~A~igva 201 (514)
+--..+++.++..+ ++|||+.+ |+.+.+.||+...
T Consensus 154 ~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 154 KIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp CHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEE
T ss_pred HHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEE
Confidence 66677888887765 99999999 9999999998654
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=97.64 E-value=5.3e-05 Score=72.91 Aligned_cols=95 Identities=16% Similarity=0.064 Sum_probs=67.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHH---HHHHHHH--------cCCcccCccceecccChHHHhhhhHHHHHHh
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNT---AEAICRE--------IGVFECNEDISLKSLTGKEFMEMHDKKAHLR 151 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~---a~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (514)
.++.|++.++++.|+++|+++.++||++... +....+. .|+. ...+. ..+.
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~---~~~~------------- 248 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQC---QREQ------------- 248 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEE---ECCT-------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chhee---eccC-------------
Confidence 4568999999999999999999999998543 2444455 6772 11110 0000
Q ss_pred hcCceEEEecChhhHHHHHHHHhhCCCE-EEEEcCCcCCHHhhhhcCcce
Q 010234 152 QSGGLLFSRAEPRHKQEIVRLLKEDGEV-VAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 152 ~~~~~i~~~~~p~~k~~iv~~l~~~~~~-v~~iGDg~ND~~ml~~A~igv 200 (514)
. -.+..|+-+.++++.+...+.+ +++|||+.+|+.|.+.||+.+
T Consensus 249 ---~--~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 249 ---G--DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp ---T--CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ---C--CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 0 0134567788888888766544 689999999999999999753
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.50 E-value=6.2e-05 Score=70.02 Aligned_cols=85 Identities=12% Similarity=0.153 Sum_probs=63.5
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCCh----HHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceE
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNK----NTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL 157 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 157 (514)
+.++.|++.+.++.|+++|++++++|||+. ..+..-.+.+|+..... ..+
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~--------------------------~~L 152 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE--------------------------SAF 152 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG--------------------------GGE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc--------------------------cce
Confidence 456789999999999999999999999975 47777788899864211 023
Q ss_pred EEecChhhHHHHHHHHhhC-CCEEEEEcCCcCCHHh
Q 010234 158 FSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPA 192 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l~~~-~~~v~~iGDg~ND~~m 192 (514)
+.+.....|....+.+... ...+++|||..+|++.
T Consensus 153 ilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 153 YLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred eccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 3343345566666666665 4568999999999986
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0002 Score=67.02 Aligned_cols=42 Identities=7% Similarity=0.090 Sum_probs=35.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCC---hHHHHHHHHHcCCc
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDN---KNTAEAICREIGVF 124 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~---~~~a~~ia~~~gi~ 124 (514)
.++.|++.++|+.|+++|++++++|||+ ...+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999998 44555666778886
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00033 Score=72.72 Aligned_cols=98 Identities=11% Similarity=0.047 Sum_probs=69.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCC------ChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceE
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGD------NKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL 157 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 157 (514)
++.|++.++|+.|+++|+++.++|+. .......... |+...... .+.+++. -
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~fd~----i~~~~~~----------------~ 157 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHFDF----LIESCQV----------------G 157 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTSSE----EEEHHHH----------------T
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhheeE----EEecccc----------------C
Confidence 57899999999999999999999997 2222222211 33222111 1122211 1
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeC
Q 010234 158 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMG 203 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg 203 (514)
..++.|+--..+++.++..++++++|||+.||+.+.+.||+....-
T Consensus 158 ~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 158 MVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 2345677778999999999999999999999999999999876654
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00026 Score=64.21 Aligned_cols=88 Identities=16% Similarity=0.160 Sum_probs=59.1
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH----cCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE----IGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
+.+++.+.++.|+++|+++.++|+++...+..+.+. ++........ ...-..+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~~~-----------------------~~~~~~K 145 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNP-----------------------VIFAGDK 145 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCC-----------------------CEECCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccccccch-----------------------hhhcCCC
Confidence 467999999999999999999999975443333332 2221000000 0000123
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
+.|+...++++.++. +++|||+.+|+.+.+.||+.
T Consensus 146 P~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 146 PGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp TTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCe
Confidence 455666777777765 99999999999999999975
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.00095 Score=62.29 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=69.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc--C---------CcccCccceecccChHHHhhhhHHHHHHh
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI--G---------VFECNEDISLKSLTGKEFMEMHDKKAHLR 151 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (514)
-++.|++.+++++ |+++.++|+.+...+..+.+.. | +......+ ++. . .
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~----f~~-~----------~- 183 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGY----FDI-N----------T- 183 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEE----ECH-H----------H-
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceE----Eee-e----------c-
Confidence 3678999999887 9999999999999888887766 4 32111110 000 0 0
Q ss_pred hcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 152 QSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 152 ~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
. ..++.|+--..+++.++..++++++|||+.+|+.+-++||+-.
T Consensus 184 -~----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 184 -S----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp -H----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred -c----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 0 1256777788899999999999999999999999999999653
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.002 Score=60.35 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=33.0
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHH---cCCc
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICRE---IGVF 124 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~---~gi~ 124 (514)
.-+++.++|++++++|++++++|||+..+...+.++ +|+.
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 347899999999999999999999997776666665 4663
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.00086 Score=67.51 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=67.2
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCC------------hHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhh
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDN------------KNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQ 152 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (514)
+.|++.++|+.|+++|++++++|+.+ ...+..+.+.+|+.- ..+ +..+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~f--d~i----~~~~-------------- 147 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPF--QVL----VATH-------------- 147 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCC--EEE----EECS--------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCE--EEE----EECC--------------
Confidence 67999999999999999999999965 223667778888731 110 0000
Q ss_pred cCceEEEecChhhHHHHHHHHh----hCCCEEEEEcCCc-----------------CCHHhhhhcCcce
Q 010234 153 SGGLLFSRAEPRHKQEIVRLLK----EDGEVVAMTGDGV-----------------NDAPALKLADIGI 200 (514)
Q Consensus 153 ~~~~i~~~~~p~~k~~iv~~l~----~~~~~v~~iGDg~-----------------ND~~ml~~A~igv 200 (514)
...+.++.|+--..+++.++ ...+++++|||+. +|+.+-+.||+..
T Consensus 148 --~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f 214 (416)
T 3zvl_A 148 --AGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 214 (416)
T ss_dssp --SSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCE
T ss_pred --CCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcc
Confidence 11122345566677888886 7788999999997 6888888888765
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0027 Score=61.34 Aligned_cols=122 Identities=13% Similarity=0.017 Sum_probs=70.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc----CCcccCccceeccc--C-hHHHhhhhHHHHH-------
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI----GVFECNEDISLKSL--T-GKEFMEMHDKKAH------- 149 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~----gi~~~~~~~~~~~~--~-~~~~~~~~~~~~~------- 149 (514)
.+.|+..+.++.|+++|++++|+||-+...++.+|+.+ ||...+ +....+ . +..-.........
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~--ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPEN--VIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGG--EEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHH--eEeeeeeeeccccccccccccccccccccc
Confidence 57899999999999999999999999999999999885 453321 111100 0 0000000000000
Q ss_pred HhhcCceEEE-----ecChhhHHHHHHHHh-hCCCEEEEEcCC-cCCHHhhhh--cCcceeeCCCCc
Q 010234 150 LRQSGGLLFS-----RAEPRHKQEIVRLLK-EDGEVVAMTGDG-VNDAPALKL--ADIGIAMGIAGT 207 (514)
Q Consensus 150 ~~~~~~~i~~-----~~~p~~k~~iv~~l~-~~~~~v~~iGDg-~ND~~ml~~--A~igvamg~~~~ 207 (514)
....+...-. .+.-+.|...++..- .....++++||+ ..|.+||+. ++.|+.+-.+..
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~ 287 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRK 287 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCC
T ss_pred cccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEecC
Confidence 0000111111 122356766666543 334568999999 579999965 444444443433
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=8.4e-05 Score=66.37 Aligned_cols=81 Identities=12% Similarity=0.090 Sum_probs=62.2
Q ss_pred CCCChhHHHHHHHHHHc-CCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEec
Q 010234 83 DPPRNEVHQAIEDCRAA-GIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRA 161 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~-Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (514)
.++.|++.++++.|+++ |+++.++|+.+...+..+.+.+|+. .. .+.
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~glf---~~----i~~------------------------- 119 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWV---EQ----HLG------------------------- 119 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHHH---HH----HHC-------------------------
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCch---hh----hcC-------------------------
Confidence 35789999999999999 9999999999888777777777761 00 000
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCC----HHhhh-hcCcce
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVND----APALK-LADIGI 200 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND----~~ml~-~A~igv 200 (514)
.+.++.++..++++++|||+.+| +.+-+ .||+..
T Consensus 120 -----~~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~ 158 (193)
T 2i7d_A 120 -----PQFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEH 158 (193)
T ss_dssp -----HHHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEE
T ss_pred -----HHHHHHcCCCcccEEEECCchhhCcHHHhhcccccccce
Confidence 01466677788899999999998 77777 777543
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.00016 Score=64.81 Aligned_cols=79 Identities=10% Similarity=0.048 Sum_probs=59.9
Q ss_pred CCCChhHHHHHHHHHHc-CCcEEEECCCChHHHHHHHHHcCCcc-cCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 83 DPPRNEVHQAIEDCRAA-GIRVMVITGDNKNTAEAICREIGVFE-CNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~-Gi~v~i~TG~~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
-++.|++.++++.|+++ |+++.++|+.+...+....+.+|+.. ...
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~-------------------------------- 121 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG-------------------------------- 121 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC--------------------------------
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch--------------------------------
Confidence 35789999999999999 99999999998777666666666532 100
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCC----HHhhh-hcCcc
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVND----APALK-LADIG 199 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND----~~ml~-~A~ig 199 (514)
...++.++..++++++|||+.+| +.+-+ .||+-
T Consensus 122 ------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~ 159 (197)
T 1q92_A 122 ------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWE 159 (197)
T ss_dssp ------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSE
T ss_pred ------HHHHHHhccCCccEEEECcccccCCchhhhcccCCCce
Confidence 22344456667889999999998 87777 88854
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0066 Score=50.77 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=33.6
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCC---hHHHHHHHHHcCCc
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDN---KNTAEAICREIGVF 124 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~---~~~a~~ia~~~gi~ 124 (514)
..|++.++|++|+++|++++++|||+ ...+...+++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45799999999999999999999998 55666667777774
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.0061 Score=57.67 Aligned_cols=95 Identities=11% Similarity=0.140 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHcCCcEEEECCCChHHH-HHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecChhh
Q 010234 87 NEVHQAIEDCRAAGIRVMVITGDNKNTA-EAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRH 165 (514)
Q Consensus 87 ~~~~~~I~~l~~~Gi~v~i~TG~~~~~a-~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~ 165 (514)
+...+.++.|+++|++ .++|+.+.... .. -++ ......+.... ......+.....++.|+-
T Consensus 148 ~~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~----~~~----------~~~~~~l~~~f---~~~~~~~~~~~~KP~p~~ 209 (284)
T 2hx1_A 148 HDLNKTVNLLRKRTIP-AIVANTDNTYPLTK----TDV----------AIAIGGVATMI---ESILGRRFIRFGKPDSQM 209 (284)
T ss_dssp HHHHHHHHHHHHCCCC-EEEECCCSEEECSS----SCE----------EECHHHHHHHH---HHHHCSCEEEESTTSSHH
T ss_pred ccHHHHHHHHhcCCCe-EEEECCCccccCcC----CCc----------cccCChHHHHH---HHHhCCceeEecCCCHHH
Confidence 4667777789999999 88887653221 00 000 00000111110 111112233445677777
Q ss_pred HHHHHHHH----hhCCCEEEEEcCCc-CCHHhhhhcCcc
Q 010234 166 KQEIVRLL----KEDGEVVAMTGDGV-NDAPALKLADIG 199 (514)
Q Consensus 166 k~~iv~~l----~~~~~~v~~iGDg~-ND~~ml~~A~ig 199 (514)
-..+++.+ +..++++++|||+. +|+.+-+.||+.
T Consensus 210 ~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ 248 (284)
T 2hx1_A 210 FMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLD 248 (284)
T ss_dssp HHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCE
T ss_pred HHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCe
Confidence 78889999 88899999999995 999999999964
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.86 E-value=0.0048 Score=54.90 Aligned_cols=94 Identities=7% Similarity=0.009 Sum_probs=67.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.++|++.+.++.|++. ++++++|......+..+.+.++.... ....+.+++.... + ..+
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~----f~~~l~rd~~~~~----------k-~~~----- 126 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV----FRARLFRESCVFH----------R-GNY----- 126 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC----EEEEECGGGCEEE----------T-TEE-----
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc----EEEEEEcccceec----------C-Cce-----
Confidence 5799999999999998 99999999999999999999988542 1112222211000 0 011
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva 201 (514)
.+.++.++...++|++|+|+.+++.+-+.+|+-|.
T Consensus 127 ---lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 127 ---VKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp ---ECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred ---eeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 12234456677899999999999998888877663
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=94.54 E-value=0.007 Score=53.17 Aligned_cols=93 Identities=10% Similarity=0.057 Sum_probs=66.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
..+|++.+.++.+.+. ++++++|......|..+.+.++.... ....+.+++.. .. +
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~----f~~~~~rd~~~----------------~~---k 110 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGA----FRARLFRESCV----------------FH---R 110 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCC----EEEEECGGGSE----------------EE---T
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCc----EEEEEeccCce----------------ec---C
Confidence 5799999999999998 99999999999999999999987532 11112222110 00 0
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI 200 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv 200 (514)
..-.+.++.++...+++++|||+.+|+.+-..+|+-|
T Consensus 111 ~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 111 GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 0011223445667789999999999999888787765
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=93.83 E-value=0.084 Score=51.44 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=37.6
Q ss_pred EEecccCCCChhHHHHHHHHHHcCCcEEEECCCC----hHHHHHHHHHcCCccc
Q 010234 77 GLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDN----KNTAEAICREIGVFEC 126 (514)
Q Consensus 77 G~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~----~~~a~~ia~~~gi~~~ 126 (514)
|++.-.+.+-|++.++|+.|+++|++++++|+.+ ...+..+.+.+|+...
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~ 75 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVS 75 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCC
Confidence 4444455667999999999999999999999875 3345555557888543
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=91.62 E-value=0.27 Score=39.90 Aligned_cols=30 Identities=23% Similarity=0.433 Sum_probs=27.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNT 113 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~ 113 (514)
++.+++.+++++++++|++++++|||+...
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 567999999999999999999999998643
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=91.53 E-value=0.28 Score=42.36 Aligned_cols=26 Identities=4% Similarity=0.052 Sum_probs=23.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGD 109 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~ 109 (514)
-++.|++.++++.|++ ++++.++|+.
T Consensus 68 ~~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CCBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 3678999999999998 4999999998
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=91.31 E-value=0.75 Score=46.86 Aligned_cols=114 Identities=15% Similarity=0.208 Sum_probs=68.1
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc-CCc---------ccCccceeccc-ChHHHhhhhH--------
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI-GVF---------ECNEDISLKSL-TGKEFMEMHD-------- 145 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~-gi~---------~~~~~~~~~~~-~~~~~~~~~~-------- 145 (514)
..|+..+.+++|+++| ++.++|+.+...+..+++.+ |.. ..+....-.++ .+....-..+
T Consensus 247 kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~Vd 325 (555)
T 2jc9_A 247 KDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVD 325 (555)
T ss_dssp CCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEEE
T ss_pred CChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEee
Confidence 3578999999999999 99999999999999999998 752 11211111111 1110000000
Q ss_pred -HHHHHh-------hcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhh-hcCc-ceee
Q 010234 146 -KKAHLR-------QSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALK-LADI-GIAM 202 (514)
Q Consensus 146 -~~~~~~-------~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~-~A~i-gvam 202 (514)
....+. .....+|+.-+ -..+.+.++..+++|++|||.. .|+---+ .+|. .+++
T Consensus 326 ~~tg~l~~~~~~~~l~~g~vY~gGn---~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLV 390 (555)
T 2jc9_A 326 TKTGKLKIGTYTGPLQHGIVYSGGS---SDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLV 390 (555)
T ss_dssp TTTTEECSSCCCSCCCTTCCEEECC---HHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEE
T ss_pred cCCCccccccccccccCCceeccCC---HHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEE
Confidence 000000 00011122111 2677888899999999999986 8987765 6774 3444
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=83.36 E-value=1.1 Score=43.12 Aligned_cols=46 Identities=9% Similarity=0.048 Sum_probs=39.9
Q ss_pred cccCCCChhHHHHHHHHH-Hc----------CCcEEEECCCChHHHHHHHHHcCCcc
Q 010234 80 GLRDPPRNEVHQAIEDCR-AA----------GIRVMVITGDNKNTAEAICREIGVFE 125 (514)
Q Consensus 80 ~~~~~l~~~~~~~I~~l~-~~----------Gi~v~i~TG~~~~~a~~ia~~~gi~~ 125 (514)
....++.++..+++.++. ++ |++++++|||+......+++++|++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 39 VFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp EEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred EECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 345678999999999988 33 89999999999999999999999965
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=83.06 E-value=0.75 Score=42.92 Aligned_cols=43 Identities=12% Similarity=0.242 Sum_probs=36.8
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECC---CChHHHHHHHHHcCCc
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITG---DNKNTAEAICREIGVF 124 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG---~~~~~a~~ia~~~gi~ 124 (514)
.+++.+++.++|++++++|++++++|| |.........+.+|+.
T Consensus 28 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 28 YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 345568999999999999999999996 7788888888888885
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 514 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-66 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-45 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 8e-25 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 3e-20 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-12 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 7e-11 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-09 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 5e-09 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-08 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 6e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-05 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 2e-05 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 5e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 6e-05 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 6e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 6e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 3e-04 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 219 bits (558), Expect = 4e-66
Identities = 147/306 (48%), Positives = 187/306 (61%), Gaps = 31/306 (10%)
Query: 191 PALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISS 250
P A I + + +AK+ + + ++ S GR+IYNNMK FIRY+ISS
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 251 NIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDS 310
N+GEV IF TAALG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM +PPR +
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 311 LISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPS 370
LIS W+ FRY+ IG YVG ATVG W+ + + VTY QLT++ QC
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWF---------MYAEDGPGVTYHQLTHFMQCTE 356
Query: 371 WGNFTVSPFTAGNQVFTFNDNPCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLL 430
F C+ F + MT++LSVLV IEM N+LN+LSE+ SL+
Sbjct: 357 DHPH-------------FEGLDCEIFEAP--EPMTMALSVLVTIEMCNALNSLSENQSLM 401
Query: 431 TMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLAIAFPVVLIDEV 490
MPPWVN WLL ++ +S LHFLILYV L IF + L +WL+VL I+ PV+ +DE+
Sbjct: 402 RMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEI 461
Query: 491 LKFVGR 496
LKF+ R
Sbjct: 462 LKFIAR 467
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 154 bits (391), Expect = 2e-45
Identities = 89/160 (55%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
Query: 74 TFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLK 133
T DPPR EV +I+ CR AGIRV++ITGDNK TA AICR IG+F NE+++ +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 134 SLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 193
+ TG+EF ++ + F+R EP HK +IV L+ E+ AMTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 194 KLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEG 233
K A+IGIAMG +GT VAK AS+MVLADD+FSTIV+AV EG
Sbjct: 130 KKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 109 bits (273), Expect = 5e-29
Identities = 53/158 (33%), Positives = 78/158 (49%), Gaps = 33/158 (20%)
Query: 73 LTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISL 132
T G D + A+++ + GI+V +ITGDN +AEAI RE+ + ++
Sbjct: 10 KTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL- 68
Query: 133 KSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPA 192
P K E V+ L+ EVVA GDG+NDAPA
Sbjct: 69 ------------------------------PHQKSEEVKKLQA-KEVVAFVGDGINDAPA 97
Query: 193 LKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230
L AD+GIA+G +G++VA E+ D+VL DD +V+A+
Sbjct: 98 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 103 bits (258), Expect = 8e-25
Identities = 36/246 (14%), Positives = 76/246 (30%), Gaps = 38/246 (15%)
Query: 7 SVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNY 66
+ + + + + AL ++ + K Y+ E A T
Sbjct: 157 TELHVSDATLFSLKGALWTLAQEVYQEWYLGSKL-------YEDVEKKIARTT------- 202
Query: 67 ASMECGLTFVGLVGLRDP--PRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGV- 123
G + P +EV + D + AG + + TG +G+
Sbjct: 203 -------FKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL 255
Query: 124 --FECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLL----FSRAEPRHKQEIVRLLKEDG 177
FE + + + E M + + + + + +
Sbjct: 256 PYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNK 315
Query: 178 EVVAMTGDGVNDAPALKLAD---IGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGR 234
+ V + GD + D + + IG G+ G + A E L +++ +GE R
Sbjct: 316 DDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGE-----LEAHHADYVINHLGELR 370
Query: 235 SIYNNM 240
+ +N+
Sbjct: 371 GVLDNL 376
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 87.3 bits (215), Expect = 3e-20
Identities = 27/160 (16%), Positives = 46/160 (28%), Gaps = 8/160 (5%)
Query: 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFM 141
R + + I VI+G + I +
Sbjct: 73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHAS-------F 125
Query: 142 EMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA 201
+ S S K ++ L E + + M GD V D A KL+D+ A
Sbjct: 126 DNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 185
Query: 202 MGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMK 241
E +E + L DF I + + + ++
Sbjct: 186 RDYLLNE-CREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 63.7 bits (154), Expect = 3e-12
Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 9/87 (10%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLL 60
L+ G +PLD + ++ +A E+ R LGF +
Sbjct: 135 SILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLN---------LPSGKFPRGFK 185
Query: 61 LNPSNYASMECGLTFVGLVGLRDPPRN 87
+ L FVGL+ + D +
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 60.3 bits (145), Expect = 7e-11
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 1 MQLLDGSVVPLDHKSRNLILDALHEMSTG--ALRCLGFAYKDELPDFETYDGNEDHPAHT 58
+ + VP+ + IL + E TG LRCL A +D
Sbjct: 167 YVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD----------TPPKREEM 216
Query: 59 LLLNPSNYASMECGLTFVGLVGL 81
+L + S + E LTFVG+VG+
Sbjct: 217 VLDDSSRFMEYETDLTFVGVVGM 239
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.3 bits (132), Expect = 2e-09
Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 13/142 (9%)
Query: 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFM 141
+ + + + ++V +I+G ++ E + ++ + N
Sbjct: 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN----------VFAN 129
Query: 142 EMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVNDAPALKLADIG 199
+ AE K ++++LLKE + + M GDG D A AD
Sbjct: 130 RLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAF 189
Query: 200 IAMG-IAGTEVAKEASDMVLAD 220
I G + K+ + + D
Sbjct: 190 IGFGGNVIRQQVKDNAKWYITD 211
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 54.1 bits (129), Expect = 5e-09
Identities = 15/60 (25%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Query: 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
K++ V K V GD ND L A GI A V +E
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTY 189
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 52.5 bits (124), Expect = 2e-08
Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 12/147 (8%)
Query: 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEM 143
P + I++ + G V V++G I ++G+ + + +
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANR----------LIV 124
Query: 144 HDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMG 203
D K G +L A+ ++I ++ + E GDG ND K A + IA
Sbjct: 125 KDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC 184
Query: 204 IAGTEVAKEASDMVLADDDFSTIVSAV 230
+ KE +D+ + D I+ +
Sbjct: 185 --AKPILKEKADICIEKRDLREILKYI 209
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 52.7 bits (125), Expect = 2e-08
Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 59/200 (29%)
Query: 88 EVHQAIEDCRAAGIRVMVITGDNKNTAEAI---------------------CREIGVFEC 126
+ +AI + GI +M++TG+ AEA + I +
Sbjct: 23 KALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM 82
Query: 127 NEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKE----------- 175
+E+ L + K F + GL+ R E + + + ++ E
Sbjct: 83 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMR-ETINVETVREIINELNLNLVAVDSG 141
Query: 176 -------------------------DGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVA 210
+ VA GDG ND A K+ +A+ A ++
Sbjct: 142 FAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA-PKIL 200
Query: 211 KEASDMVLADDDFSTIVSAV 230
KE +D V + A+
Sbjct: 201 KENADYVTKKEYGEGGAEAI 220
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 46.5 bits (109), Expect = 2e-06
Identities = 29/197 (14%), Positives = 55/197 (27%), Gaps = 55/197 (27%)
Query: 88 EVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIG------------VFECNEDIS--LK 133
+ ++I G+ V +++G+ A+ +G +F+ + I
Sbjct: 24 KAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFS 83
Query: 134 SLTGKEFMEMHDKKAHLRQSGGLLFSRAE------PRHKQEIVRLLKEDGEVV------- 180
+ +F+E K+ +R + A P + + + G V+
Sbjct: 84 NEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSW 143
Query: 181 ---------------------------AMTGDGVNDAPALKLADIGIAMGIAGTEVAKEA 213
+ GD ND P +L A T+ K
Sbjct: 144 HLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANA-TDNIKAV 202
Query: 214 SDMVLADDDFSTIVSAV 230
SD V I
Sbjct: 203 SDFVSDYSYGEEIGQIF 219
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 45.7 bits (107), Expect = 6e-06
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 138 KEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEV----VAMTGDGVNDAPAL 193
KE + R A+ KQ+ + + + GDG ND L
Sbjct: 159 KEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISML 218
Query: 194 KLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230
+ A IG+AMG A E K A+D V A D I A+
Sbjct: 219 RHAAIGVAMGQA-KEDVKAAADYVTAPIDEDGISKAM 254
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
E A+ GD +ND L+ A G+AMG A E K +D V +D
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTND 273
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 43.1 bits (101), Expect = 2e-05
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
Query: 126 CNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGD 185
+ DI + L+G++ + + A L L + ++++ E A GD
Sbjct: 45 MDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGD 104
Query: 186 GVNDAPALKLADIGIAMGIAGTEVAKEASDMVL 218
D PA A+ A K A D VL
Sbjct: 105 DSVDLPAFAACGTSFAVADA-PIYVKNAVDHVL 136
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.6 bits (100), Expect = 5e-05
Identities = 22/145 (15%), Positives = 47/145 (32%), Gaps = 19/145 (13%)
Query: 89 VHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148
+ GI V + + + E + R+ GV+ N + FM+ +
Sbjct: 140 YENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSN------FMDFDENGV 193
Query: 149 HLRQSGGLLFSRAEPRHKQEI---VRLLKEDGEVVAMTGDGVNDAPALKL---ADIGIAM 202
G L+ + + LK++ ++ + GD D + + +
Sbjct: 194 LKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILL-GDSQGDLRMADGVANVEHILKI 252
Query: 203 GIAGTEVA------KEASDMVLADD 221
G V ++ D+VL +
Sbjct: 253 GYLNDRVDELLEKYMDSYDIVLVKE 277
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 42.6 bits (99), Expect = 6e-05
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 136 TGKEFMEMHDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKL 195
+G F+++ H + + R VVA+ GD NDA LK+
Sbjct: 177 SGFGFIDLIIPGLHKANGI-----------SRLLKRWDLSPQNVVAI-GDSGNDAEMLKM 224
Query: 196 ADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAF 243
A AMG A E K+ + D++ ++ + +++ +N F
Sbjct: 225 ARYSFAMGNA-AENIKQIARYATDDNNHEGALNVI---QAVLDNTYPF 268
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 42.3 bits (98), Expect = 6e-05
Identities = 28/237 (11%), Positives = 56/237 (23%), Gaps = 32/237 (13%)
Query: 4 LDGSVVPLDHKSRNLILDALHEM---------STGALRCLGFAYKDELPDF--------- 45
+D ++ + + + E+ ++ R Y+ EL
Sbjct: 9 IDKTL--IPGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGS 66
Query: 46 ETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPRNEVHQAIEDCRAAGIRVMV 105
+ P NY +E G+ + N
Sbjct: 67 AIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKF 126
Query: 106 ITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEPRH 165
+ A+ RE + + +
Sbjct: 127 TGMPPELVPLAMEREYSETIFEWSRD------GWEEVLVEGGFKVTMGSRFYTVHGNSDK 180
Query: 166 KQEIVRLLKEDG-----EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMV 217
+ LL E A+ GD ND P ++ D +G + A+ S ++
Sbjct: 181 GKAAKILLDFYKRLGQIESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 42.6 bits (99), Expect = 6e-05
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230
E + GD ND ++ A +G+A+ A KE ++ V + + A+
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKSNLEDGVAFAI 265
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 41.9 bits (97), Expect = 1e-04
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 178 EVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
+ V + GD ND L A+ A T+ AK + VL
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVSH 267
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.3 bits (93), Expect = 3e-04
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 166 KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDD 222
+ R+ + E+V GD ND + A + +AM A E KEASD+V ++
Sbjct: 196 RFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLTNN 250
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 514 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.96 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.92 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.74 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.65 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.64 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.64 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.62 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.61 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.6 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.58 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.56 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.44 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.38 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.36 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.33 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.29 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.26 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.25 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.22 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.16 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.88 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 98.73 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.62 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.57 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.46 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.41 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 98.4 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.37 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.22 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 98.18 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.17 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 98.16 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 98.11 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 98.08 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.07 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.06 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.02 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 97.87 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 97.82 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.78 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.78 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 97.72 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 97.64 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 97.6 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.59 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.56 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 97.3 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 97.19 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 97.17 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 97.0 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 96.54 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 96.49 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.04 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 88.08 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 83.64 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 82.12 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=1e-28 Score=252.82 Aligned_cols=244 Identities=57% Similarity=0.963 Sum_probs=199.9
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHhhhhhhcccccCCCCccccCCCCCCCCCCC
Q 010234 232 EGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSL 311 (514)
Q Consensus 232 ~gr~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~l~~~~~~~~im~~~P~~~~~~~ 311 (514)
.||..+.|++|++.|.++.|+..++..+++.+++.|.|+++.|++|+|+++|++|+++++.+|+|+++|++||+++++++
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~l 306 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPL 306 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCS
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccc
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccCCCCCCCCCcccCCCcCCCcccccCCC
Q 010234 312 ISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGINLIGDGHSLVTYSQLTNWGQCPSWGNFTVSPFTAGNQVFTFNDN 391 (514)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (514)
++++.+.+++.++...++.+++.+++.+....... +.. +........|...... .. ..
T Consensus 307 i~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~----~~---------~~ 364 (472)
T d1wpga4 307 ISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGP------GVT---YHQLTHFMQCTEDHPH----FE---------GL 364 (472)
T ss_dssp SCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSC------CCT---TSGGGGTTTTSSSTTT----TC---------CS
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CCc---HHHHhHHhhccCCccc----cc---------cc
Confidence 99999999999999888877666655442111000 000 0000111111110000 00 00
Q ss_pred CCCccCCcchhhHHHHHHHHHHHHHHHHHHhhcCCCCccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccCCh
Q 010234 392 PCDYFHGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSF 471 (514)
Q Consensus 392 ~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~N~~~~~~~~~~~~l~~~~~~ip~~~~~f~~~~l~~ 471 (514)
.+. ......++|++|.+++++|+++.+++|+++.+.|+.++++|++++++++++++++++++|+|+++.+|++.++++
T Consensus 365 ~~~--~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~ 442 (472)
T d1wpga4 365 DCE--IFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDL 442 (472)
T ss_dssp CGG--GGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCH
T ss_pred chh--hhhHhHHHHHHHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCH
Confidence 000 111256899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 010234 472 NEWLLVLAIAFPVVLIDEVLKFVGRCTN 499 (514)
Q Consensus 472 ~~w~~~l~~~~~~~l~~e~~K~~~r~~~ 499 (514)
.+|+++++++++.++++|++|++.|++.
T Consensus 443 ~~w~i~l~~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 443 TQWLMVLKISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999988765
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=3.2e-29 Score=218.16 Aligned_cols=150 Identities=59% Similarity=0.879 Sum_probs=139.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
|++|++++++|+.|+++||+++|+|||+..+|..+|+++|+...+..+....+++.++.............+..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 89999999999999999999999999999999999999999888877766778888888777666555555678999999
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHh
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEG 233 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 233 (514)
|++|..+++.++..++.|+|+|||.||.+||++||+||+|+ ++++.++++||+++.++++..++++|++|
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=3.3e-25 Score=184.77 Aligned_cols=124 Identities=43% Similarity=0.646 Sum_probs=108.2
Q ss_pred EEEEecccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcC
Q 010234 75 FVGLVGLRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSG 154 (514)
Q Consensus 75 ~lG~~~~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (514)
..+.++++|++|++++++|+.|+++|++++|+|||+..++..+++++|+.
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~------------------------------ 61 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------ 61 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh------------------------------
Confidence 34578899999999999999999999999999999999999999999994
Q ss_pred ceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHH
Q 010234 155 GLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVG 231 (514)
Q Consensus 155 ~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~ 231 (514)
.++++++|++|..+++.++.. +.|+|+|||.||.+||+.||+||||+ ++++.++++||+++.++++.+++++|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 488999999999999999875 68999999999999999999999999 788999999999999999999998873
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.74 E-value=1.3e-20 Score=186.74 Aligned_cols=196 Identities=14% Similarity=0.119 Sum_probs=141.3
Q ss_pred eCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecccCCCC--h
Q 010234 10 PLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGLRDPPR--N 87 (514)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~~~l~--~ 87 (514)
.++++.++.+...+.+++++|+|++++|++..++.+.. ...+....|++..+++++ +
T Consensus 160 ~~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~---------------------~~~~~~~~g~i~~~~~i~p~~ 218 (380)
T d1qyia_ 160 HVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK---------------------IARTTFKTGYIYQEIILRPVD 218 (380)
T ss_dssp TCSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCS---------------------CCSCSSCCCTTTTCCBSSCHH
T ss_pred CCcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccccc---------------------cchhhHhcccccccccccchh
Confidence 34555666777888999999999999999875322110 112233457788888755 5
Q ss_pred hHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHH---------HhhcCceEE
Q 010234 88 EVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAH---------LRQSGGLLF 158 (514)
Q Consensus 88 ~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~ 158 (514)
+++++|+.|+++|++++|+||++..++..+++++|+....... ..+++++.......... ........+
T Consensus 219 ~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~--~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 296 (380)
T d1qyia_ 219 EVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEAD--FIATASDVLEAENMYPQARPLGKPNPFSYIAALYG 296 (380)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGG--GEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHC
T ss_pred hHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcc--eEEecchhhhhhhhccccccccCCChHHHHHHHHH
Confidence 9999999999999999999999999999999999997643321 12333332221110000 000012346
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcC---cceeeCCCCcHHHH----hcccccccCCCchhHHHHH
Q 010234 159 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD---IGIAMGIAGTEVAK----EASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 159 ~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~---igvamg~~~~~~~k----~~ad~v~~~~~~~~i~~~i 230 (514)
.+.+|.+|..+++.++..+++|+++|||.||++|++.|| +||+||..+++..+ ..||+++. +...+..++
T Consensus 297 ~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 297 NNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp CCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 788999999999999999999999999999999999999 99999987776433 37999995 444454443
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.65 E-value=4.9e-16 Score=147.59 Aligned_cols=65 Identities=28% Similarity=0.352 Sum_probs=58.0
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...++|++||||.||++||+.||+||||+ |+++.+|+.||+++.+++.+|++++|++
T Consensus 219 ~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 219 KRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp HHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred HHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 5556666677789999999999999999999999999 6778889999999999999999999964
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.64 E-value=7.3e-16 Score=141.21 Aligned_cols=151 Identities=21% Similarity=0.227 Sum_probs=104.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc----Cccc-e------ecccChHHHhh---------
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC----NEDI-S------LKSLTGKEFME--------- 142 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~----~~~~-~------~~~~~~~~~~~--------- 142 (514)
..+.+.+.++|++|+++|++++++|||+...+..+++.+++... +... . .......+...
T Consensus 18 ~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T d1wr8a_ 18 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 97 (230)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence 35789999999999999999999999999999999998887421 0000 0 00000000000
Q ss_pred -----------------------hhHHHHHHhhc---------CceEEEecChhhH----HHHHHHHhhCCCEEEEEcCC
Q 010234 143 -----------------------MHDKKAHLRQS---------GGLLFSRAEPRHK----QEIVRLLKEDGEVVAMTGDG 186 (514)
Q Consensus 143 -----------------------~~~~~~~~~~~---------~~~i~~~~~p~~k----~~iv~~l~~~~~~v~~iGDg 186 (514)
........... ...+-......+| ..+++.++..+++++++|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 00000000000 1122222333444 45556677788999999999
Q ss_pred cCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhH
Q 010234 187 VNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGR 234 (514)
Q Consensus 187 ~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr 234 (514)
.||++|++.||+||||| ++++.+|+.||+|+.+++.+|+++++++..
T Consensus 178 ~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 99999999999999999 777888999999999999999999987644
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=1.1e-15 Score=144.05 Aligned_cols=65 Identities=20% Similarity=0.306 Sum_probs=57.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++||||.||++||+.||+|+||+ |+++.+|+.|++++.+++.+|+++++++
T Consensus 203 ~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~~ 267 (271)
T d1rkqa_ 203 KSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 267 (271)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred ceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHHH
Confidence 4455555667788999999999999999999999999 6778889999999999999999999864
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.62 E-value=2e-15 Score=138.25 Aligned_cols=151 Identities=15% Similarity=0.130 Sum_probs=104.3
Q ss_pred ccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc----Cccc-------eecccChHHHhhhhH----
Q 010234 81 LRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC----NEDI-------SLKSLTGKEFMEMHD---- 145 (514)
Q Consensus 81 ~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~----~~~~-------~~~~~~~~~~~~~~~---- 145 (514)
-+.++.+++.+++++|++.|++++++|||+...+..+.+.+|+... +... ...............
T Consensus 17 ~~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (225)
T d1l6ra_ 17 RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK 96 (225)
T ss_dssp TTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred CCCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999999999887432 1100 000000010000000
Q ss_pred ----------------------------HHHHHhhcC-------ceEEEecChhhHH----HHHHHHhhCCCEEEEEcCC
Q 010234 146 ----------------------------KKAHLRQSG-------GLLFSRAEPRHKQ----EIVRLLKEDGEVVAMTGDG 186 (514)
Q Consensus 146 ----------------------------~~~~~~~~~-------~~i~~~~~p~~k~----~iv~~l~~~~~~v~~iGDg 186 (514)
......... ..+-......+|. .+++.++.+.++|++||||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs 176 (225)
T d1l6ra_ 97 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDS 176 (225)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred hcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCC
Confidence 000001111 1111223334554 4555666678899999999
Q ss_pred cCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 187 VNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 187 ~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
.||++|++.||+||||+ |+.+.+|+.||+++..++.+|+++++++
T Consensus 177 ~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 177 NNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred cchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999 6778889999999999999999999965
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=8.7e-16 Score=144.60 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=58.0
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...++|++||||.||++||+.||+||||+ |+++.+|+.|++|+.+++.+|++++|++
T Consensus 196 ~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~~ 260 (269)
T d1rlma_ 196 SRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 260 (269)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred HHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 4455666777889999999999999999999999999 6788889999999999999999999963
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.60 E-value=1.1e-15 Score=143.23 Aligned_cols=65 Identities=38% Similarity=0.417 Sum_probs=58.5
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...+++++||||.||++||+.||.||||+ |+.+.+|+.||+|+.+++.+|++++|++
T Consensus 192 ~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 192 DEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred HHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 4555666778899999999999999999999999999 7788889999999999999999999975
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.58 E-value=4.4e-15 Score=139.61 Aligned_cols=65 Identities=25% Similarity=0.257 Sum_probs=58.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
..+++.++...++|++||||.||++||+.||+||||+ |+++.+|+.||+++.+++.+|+++++++
T Consensus 196 ~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~~ 260 (267)
T d1nf2a_ 196 RFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLER 260 (267)
T ss_dssp HHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHTT
T ss_pred HHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 4555566777889999999999999999999999999 7788889999999999999999999853
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.56 E-value=8.3e-15 Score=138.59 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=54.5
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCC-CchhHHHHHHH
Q 010234 167 QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADD-DFSTIVSAVGE 232 (514)
Q Consensus 167 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~-~~~~i~~~i~~ 232 (514)
..+++.++...++|++||||.||++||+.||+||||+ |+++.+|+.||+++.++ +..++.+++++
T Consensus 213 ~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~~ 278 (283)
T d2b30a1 213 NYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 278 (283)
T ss_dssp HHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred HHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHHH
Confidence 4566666777889999999999999999999999999 77888899999999754 55568887753
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.44 E-value=2.3e-13 Score=118.28 Aligned_cols=109 Identities=19% Similarity=0.199 Sum_probs=90.1
Q ss_pred HHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh--hhHHH
Q 010234 91 QAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP--RHKQE 168 (514)
Q Consensus 91 ~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~k~~ 168 (514)
.+|+.|++.|+.+.++||+....+...++++++.. ++....+ ....+
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-------------------------------~~~~~~~K~~~l~~ 87 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------------FFLGKLEKETACFD 87 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------------EEESCSCHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-------------------------------cccccccHHHHHHH
Confidence 58999999999999999999999999999998843 1211221 12246
Q ss_pred HHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchh-HHHHHH
Q 010234 169 IVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFST-IVSAVG 231 (514)
Q Consensus 169 iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~-i~~~i~ 231 (514)
+++.++...++|+++||+.||++||+.||+|+||+ ++.+.+|+.||+|+..+.-+| +.++++
T Consensus 88 ~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e 150 (177)
T d1k1ea_ 88 LMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSD 150 (177)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHH
T ss_pred HHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHH
Confidence 77788888999999999999999999999999999 778888999999999887776 555554
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.38 E-value=5.2e-13 Score=123.29 Aligned_cols=145 Identities=16% Similarity=0.151 Sum_probs=94.4
Q ss_pred hhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCcc-------ceecccChHHHhhh----------------
Q 010234 87 NEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNED-------ISLKSLTGKEFMEM---------------- 143 (514)
Q Consensus 87 ~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~-------~~~~~~~~~~~~~~---------------- 143 (514)
++..+++.+++++|++++++|||+...+..+.+++++...... +.........+...
T Consensus 21 ~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T d1s2oa1 21 LEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhh
Confidence 3455667777899999999999999999999999987543211 10000000000000
Q ss_pred -----------------------------hHH-HHHHhh----------cCceEEEecChhhHHHHHHH----HhhCCCE
Q 010234 144 -----------------------------HDK-KAHLRQ----------SGGLLFSRAEPRHKQEIVRL----LKEDGEV 179 (514)
Q Consensus 144 -----------------------------~~~-~~~~~~----------~~~~i~~~~~p~~k~~iv~~----l~~~~~~ 179 (514)
.+. ...... ....+-......+|...++. ++...++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~ 180 (244)
T d1s2oa1 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred cccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhh
Confidence 000 000000 01122233344567555554 4555688
Q ss_pred EEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccc-------ccccCCCchhHHHHHHH
Q 010234 180 VAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASD-------MVLADDDFSTIVSAVGE 232 (514)
Q Consensus 180 v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad-------~v~~~~~~~~i~~~i~~ 232 (514)
++++|||.||++||+.||.||||+ |+.+.+|+.|| +++..++.+|+.+++++
T Consensus 181 ~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 181 TLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 999999999999999999999999 66666688888 67778889999999876
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.36 E-value=3e-13 Score=124.52 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=38.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCc
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~ 124 (514)
+...+.++++|++|+++|++++++|||+...+..+.+++++.
T Consensus 16 ~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 16 GYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 445678999999999999999999999999999999999874
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.33 E-value=2.8e-12 Score=114.56 Aligned_cols=131 Identities=15% Similarity=0.140 Sum_probs=96.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
+..++....++.+ +.+.+.+++|+.............++......... ... ...........+
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~--~~~--------------~~~~~~~~~~~~ 131 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLE--IDD--------------SDRVVGYQLRQK 131 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEE--ECT--------------TSCEEEEECCSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceee--eec--------------ccccccccccch
Confidence 4566777777665 57899999999999999999999887543211100 000 001223334456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHh
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEG 233 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~g 233 (514)
..+...++.++...++|+|||||.||++||+.||+||||+ ++.++.++++|+++. ++++++.++|.+.
T Consensus 132 ~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 132 DPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred hhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHHH
Confidence 6778889999999999999999999999999999999994 777887888888885 4666676666543
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.29 E-value=2.7e-12 Score=115.66 Aligned_cols=78 Identities=22% Similarity=0.275 Sum_probs=66.2
Q ss_pred cccCCceeeCCHHHHHHHHHHHHHHhhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEecc
Q 010234 2 QLLDGSVVPLDHKSRNLILDALHEMSTGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVGL 81 (514)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~ 81 (514)
++.+|.+.+|+++.|+.+.+.+++|+++|+||||+|||.++.+++....+ .+.++.+.+|+||+|+|++++
T Consensus 136 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~---------~~~~~~~~~e~~L~flGlvgi 206 (214)
T d1q3ia_ 136 ILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK---------FDTDELNFPTEKLCFVGLMSM 206 (214)
T ss_dssp EEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCC---------CCTTTTSSCCSSEEEEEEEEE
T ss_pred eeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccc---------cChhhhhhhcCCCEEEEEEEE
Confidence 35689999999999999999999999999999999999998876554432 123456678899999999999
Q ss_pred cCCCChh
Q 010234 82 RDPPRNE 88 (514)
Q Consensus 82 ~~~l~~~ 88 (514)
+||+|++
T Consensus 207 ~DPPR~~ 213 (214)
T d1q3ia_ 207 IDHHHHH 213 (214)
T ss_dssp ESCCSCC
T ss_pred EeCCCCC
Confidence 9999964
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.26 E-value=1.9e-12 Score=115.95 Aligned_cols=138 Identities=22% Similarity=0.275 Sum_probs=98.8
Q ss_pred ccCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 81 LRDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 81 ~~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
...++.+++.+.++.++..|..++++||.....+....++.+........ ...++.... ...........
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~ 141 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANR----LIVKDGKLT------GDVEGEVLKEN 141 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEE----EEEETTEEE------EEEECSSCSTT
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhh----hcccccccc------ccccccccccc
Confidence 44578899999999999999999999999999999999888774321110 000000000 00000000001
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 161 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 161 ~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
..+.....+++.++...++++++|||.||++|++.||+|||| ++.+.+|+.||+++.++|+++|+++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 142 AKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 112344667778888899999999999999999999999999 46777799999999999999998765
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=1.1e-11 Score=112.86 Aligned_cols=43 Identities=9% Similarity=0.135 Sum_probs=39.3
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCc
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVF 124 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~ 124 (514)
+..+.+.++++|++|+++|++++++|||+...+..+.+++++.
T Consensus 19 ~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 19 HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 3457889999999999999999999999999999999999874
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=1e-11 Score=112.28 Aligned_cols=121 Identities=21% Similarity=0.276 Sum_probs=89.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccc--eecccChHHHhhhhHHHHHHhhcCceEEE--
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDI--SLKSLTGKEFMEMHDKKAHLRQSGGLLFS-- 159 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-- 159 (514)
++.|++.++|+.|+++|++++++||.....+.++++.+|+......- .....+|. ..-..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~----------------~~g~~~~ 145 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE----------------YAGFDET 145 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSC----------------EEEECTT
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhc----------------cccceee
Confidence 47899999999999999999999999999999999999996421000 00000000 00001
Q ss_pred --ecChhhHHHHHHHHhh--CCCEEEEEcCCcCCHHhhhhcCcceeeCCC-CcHHHHhcccccccC
Q 010234 160 --RAEPRHKQEIVRLLKE--DGEVVAMTGDGVNDAPALKLADIGIAMGIA-GTEVAKEASDMVLAD 220 (514)
Q Consensus 160 --~~~p~~k~~iv~~l~~--~~~~v~~iGDg~ND~~ml~~A~igvamg~~-~~~~~k~~ad~v~~~ 220 (514)
...+..|.++++.++. ..++++++|||.||++|++.||++||++.+ ..+..++.||+++.+
T Consensus 146 ~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 146 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred eeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 1345678888888764 467899999999999999999999999844 345667889988864
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.16 E-value=2.6e-11 Score=110.19 Aligned_cols=147 Identities=18% Similarity=0.112 Sum_probs=102.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|+++|++++++|+.....+..+++++|+........ ....+...... .............|
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~-~~~~~~~~~~~------~~~~~~~~~~~~k~ 147 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNH-ASFDNDYIHID------WPHSCKGTCSNQCG 147 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEE-EECSSSBCEEE------CTTCCCTTCCSCCS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeee-EEEeCCcceec------cccccccccccCCH
Confidence 578999999999999999999999999999999999998754211000 00000000000 00001112335577
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHHHHhHhHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYN 238 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i~~gr~~~~ 238 (514)
..|..+++.++..+++|+++||+.||++|++.||+++|++.......+...+++ .-.++..+...+++-....+
T Consensus 148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCee-ecCCHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999843333433334433 34588888888876554443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=1e-10 Score=106.66 Aligned_cols=55 Identities=11% Similarity=0.186 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHh-hCCCEEEEEcCC----cCCHHhhhhcC-cceeeCCCCcHHHHhcccccc
Q 010234 163 PRHKQEIVRLLK-EDGEVVAMTGDG----VNDAPALKLAD-IGIAMGIAGTEVAKEASDMVL 218 (514)
Q Consensus 163 p~~k~~iv~~l~-~~~~~v~~iGDg----~ND~~ml~~A~-igvamg~~~~~~~k~~ad~v~ 218 (514)
..+|...++.+. ...++|++|||+ .||++||+.|+ .|+||+ |+.|.+|..+|+++
T Consensus 183 ~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 183 GWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp TCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred hccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 356777777764 467899999995 59999999998 799999 88888899999876
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.88 E-value=1.5e-09 Score=98.01 Aligned_cols=63 Identities=14% Similarity=0.256 Sum_probs=45.0
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhcccccccCCCchhHHHHH
Q 010234 162 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 162 ~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad~v~~~~~~~~i~~~i 230 (514)
.-.+|...++.+... +.+++|||+.||++||+.|+.|+||++... +..|++.+.+. +.+.+++
T Consensus 156 ~g~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~~---~~~A~~~~~~~--~ev~~~l 218 (229)
T d1u02a_ 156 PGVNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKVGEG---ETHAKFHVADY--IEMRKIL 218 (229)
T ss_dssp TTCCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEESSS---CCCCSEEESSH--HHHHHHH
T ss_pred CCCCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEeCCC---CccCeEEcCCH--HHHHHHH
Confidence 336788889888754 678999999999999999976655542211 45688888643 3355544
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.73 E-value=5.6e-09 Score=95.14 Aligned_cols=69 Identities=32% Similarity=0.512 Sum_probs=56.2
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHH--hhcCCeEEEEEEeeCCCCccCCCCCCCCcccccccCCCccccccCCcEEEEEec
Q 010234 3 LLDGSVVPLDHKSRNLILDALHEM--STGALRCLGFAYKDELPDFETYDGNEDHPAHTLLLNPSNYASMECGLTFVGLVG 80 (514)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~G~r~l~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~ 80 (514)
+.+|+..+++++.|+.+.+.++++ +++|+||||+|||+++++...... .+..+++++|+||+|+|+++
T Consensus 169 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~----------~~~~~~~~~E~~L~flGlvg 238 (239)
T d1wpga3 169 RVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVL----------DDSSRFMEYETDLTFVGVVG 238 (239)
T ss_dssp EETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCT----------TCGGGHHHHTCSEEEEEEEE
T ss_pred ecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccc----------cchhhHHHhcCCCEEEEEEC
Confidence 467889999999999999999987 779999999999999876443221 12345678899999999998
Q ss_pred c
Q 010234 81 L 81 (514)
Q Consensus 81 ~ 81 (514)
+
T Consensus 239 i 239 (239)
T d1wpga3 239 M 239 (239)
T ss_dssp E
T ss_pred C
Confidence 5
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=6.8e-09 Score=94.31 Aligned_cols=39 Identities=13% Similarity=0.128 Sum_probs=31.7
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI 121 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~ 121 (514)
+.++++.+.++|++|+++|+ ++++|||+...+.....+.
T Consensus 18 ~~~i~~~~~~al~~l~~~g~-~~i~Tgr~~~~~~~~~~~~ 56 (243)
T d2amya1 18 RQKITKEMDDFLQKLRQKIK-IGVVGGSDFEKVQEQLGND 56 (243)
T ss_dssp TSCCCHHHHHHHHHHTTTSE-EEEECSSCHHHHHHHHCTT
T ss_pred CCcCCHHHHHHHHHHHcCCC-EEEEcCCChHHhHHHHhhh
Confidence 34689999999999998885 7899999988777665443
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.57 E-value=4.5e-08 Score=87.51 Aligned_cols=122 Identities=17% Similarity=0.159 Sum_probs=90.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++|+.|+++|+++.++|+.+...+..+.+.+|+.+....+.. ++ ..-..++.|
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~----~~----------------~~~~~Kp~~ 147 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS----AE----------------KLPYSKPHP 147 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE----CT----------------TSSCCTTST
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccccccc----cc----------------ccccchhhH
Confidence 4579999999999999999999999999999999999999764433211 11 111234566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcce-ee--CCCCcHHHHhcccccccCCCchh
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGI-AM--GIAGTEVAKEASDMVLADDDFST 225 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igv-am--g~~~~~~~k~~ad~v~~~~~~~~ 225 (514)
+--..+++.++..++++++|||+.+|+.+-+.+|+.. .+ +....+.....||+++.+.....
T Consensus 148 ~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 148 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred HHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 6778999999999999999999999999999999643 22 21222222345788776654433
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.46 E-value=4.5e-08 Score=87.68 Aligned_cols=123 Identities=19% Similarity=0.236 Sum_probs=90.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.+.++.|++.|+++.++||.+...+..+.+.+|+......+... . ..-..++.|
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~----~----------------~~~~~kp~p 154 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGG----Q----------------SLPEIKPHP 154 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECT----T----------------TSSSCTTSS
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccc----c----------------ccccccccc
Confidence 46799999999999999999999999999999999999997544322111 0 001123456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCc-HHHHhcccccccCCCchhHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGT-EVAKEASDMVLADDDFSTIVS 228 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~-~~~k~~ad~v~~~~~~~~i~~ 228 (514)
+.-..+.+.++..++++++|||+.+|+.+-+.||+ +|..|.+.. +.....+|+++. +...+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ 221 (224)
T d2hsza1 155 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 221 (224)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred hhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHH
Confidence 66788889999999999999999999999999995 343332222 333445788875 4444443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.41 E-value=1.8e-07 Score=84.20 Aligned_cols=125 Identities=14% Similarity=0.154 Sum_probs=85.1
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAG-IRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~G-i~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.|++.+++++|++.| +++.++||.+...+....+..|+......+. .+++. ......
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~----~~~~~----------------~~~k~~ 150 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGA----FADDA----------------LDRNEL 150 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEE----CTTTC----------------SSGGGH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccc----ccccc----------------ccccch
Confidence 35689999999999987 8999999999999999999999976433211 11100 000111
Q ss_pred hhhHHHHHHHH---hhCCCEEEEEcCCcCCHHhhhhcC---cceeeCCCCcHH-HHhcccccccCCCchhHHHHH
Q 010234 163 PRHKQEIVRLL---KEDGEVVAMTGDGVNDAPALKLAD---IGIAMGIAGTEV-AKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 163 p~~k~~iv~~l---~~~~~~v~~iGDg~ND~~ml~~A~---igvamg~~~~~~-~k~~ad~v~~~~~~~~i~~~i 230 (514)
|....+.++.+ +..++++++|||+.+|+.+-+.|| ++|+.|....+. .+..||+++. ++..+.+++
T Consensus 151 p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l 223 (228)
T d2hcfa1 151 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 223 (228)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred hHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHH
Confidence 22223333444 456789999999999999999999 556667555554 3445799885 555555555
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=98.40 E-value=4.2e-07 Score=78.71 Aligned_cols=136 Identities=18% Similarity=0.116 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHH---------------HHHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTA---------------EAICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a---------------~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
++-|++.++++.|+++|++++++|..+.... .......|+...... .+....+. .
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~cp~~p~~-------~ 96 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIY---YCPHHPQG-------S 96 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEE---EECCBTTC-------S
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccccee---eccccccc-------c
Confidence 3569999999999999999999999874211 111111121100000 00000000 0
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc--eee--CCCCcHHHHhcccccccCCCch
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG--IAM--GIAGTEVAKEASDMVLADDDFS 224 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig--vam--g~~~~~~~k~~ad~v~~~~~~~ 224 (514)
.........+.++.|.--.++++.++...++++||||+.+|+.+-+.||++ +.+ |....+..+..||+++. +..
T Consensus 97 ~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~ 174 (182)
T d2gmwa1 97 VEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLA 174 (182)
T ss_dssp SGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGG
T ss_pred cccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHH
Confidence 000001122335667778999999999999999999999999999999985 222 33334555667999874 567
Q ss_pred hHHHHHH
Q 010234 225 TIVSAVG 231 (514)
Q Consensus 225 ~i~~~i~ 231 (514)
.+.++|+
T Consensus 175 dl~~~ik 181 (182)
T d2gmwa1 175 DLPQAIK 181 (182)
T ss_dssp GHHHHHH
T ss_pred HHHHHhc
Confidence 7777664
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.37 E-value=2.2e-07 Score=85.23 Aligned_cols=101 Identities=22% Similarity=0.281 Sum_probs=79.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++||.+...+..+.+.+|+.....+. .+.+++ ....++.|
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~---~~~~d~----------------~~~~KP~p 159 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF---LVTPDD----------------VPAGRPYP 159 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC---CBCGGG----------------SSCCTTSS
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccc---cccccc----------------ccccccCh
Confidence 57899999999999999999999999999999999999886532111 112111 11235667
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCcCCHHhhhhcCc---ceeeC
Q 010234 164 RHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADI---GIAMG 203 (514)
Q Consensus 164 ~~k~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~i---gvamg 203 (514)
+.-.++++.++.. .+++++|||+.+|+.+-+.||+ ||+-|
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G 203 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG 203 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccC
Confidence 7788999999975 5899999999999999999995 55545
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.22 E-value=4.5e-07 Score=80.20 Aligned_cols=122 Identities=11% Similarity=0.103 Sum_probs=88.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.+++.+.++.++..| ++.++|+.+...+....+.+|+......+..... ..+..
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~----------------------~~~~~ 139 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSP----------------------EAPHK 139 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECS----------------------SCCSH
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccccccccc----------------------ccccc
Confidence 357899999999998765 8999999999999999999999764433211000 12334
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCCcHHHH-hcccccccCCCchhHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAGTEVAK-EASDMVLADDDFSTIVSA 229 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~~~~~k-~~ad~v~~~~~~~~i~~~ 229 (514)
|+....+++.++.+++++++|||+.||+.+.+.||+ +|+.|....+... ..+|+++.+ ...+.+.
T Consensus 140 p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 140 ADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred ccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 556677888889999999999999999999999996 5555544444433 348888754 4444443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=98.18 E-value=1.2e-06 Score=79.27 Aligned_cols=119 Identities=15% Similarity=0.155 Sum_probs=88.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
..+.|++.+++++|+++|+++.++|+.+........+.+|+..-....... .+ .....++.
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~-~d------------------~~~~~KP~ 186 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGH-FD------------------TKIGHKVE 186 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEE-EC------------------GGGCCTTC
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhccee-ec------------------cccccCCC
Confidence 356899999999999999999999999999999999988875432211000 00 11123567
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceee----CCCCcHHHHhcccccccC
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAM----GIAGTEVAKEASDMVLAD 220 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvam----g~~~~~~~k~~ad~v~~~ 220 (514)
|+--..+++.++..++++++|||+.+|+.+-++||+..+. |+.........++.++.+
T Consensus 187 p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s 248 (253)
T d1zs9a1 187 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 248 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred cHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECC
Confidence 7777899999999999999999999999999999975443 444443444556666643
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.17 E-value=5e-07 Score=82.66 Aligned_cols=62 Identities=16% Similarity=0.185 Sum_probs=44.2
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCc-ceee--CCCCcH---HHHhcccccccCC
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADI-GIAM--GIAGTE---VAKEASDMVLADD 221 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~i-gvam--g~~~~~---~~k~~ad~v~~~~ 221 (514)
++.|+--..+++.++..+++++||||+. +|+.|.+.||+ +|.+ |.+..+ ..+..+|+++.+-
T Consensus 180 KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl 248 (253)
T d1yv9a1 180 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSL 248 (253)
T ss_dssp TTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSG
T ss_pred ccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCH
Confidence 3444555788999999999999999996 59999999997 5555 322222 2233458888654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.16 E-value=2e-06 Score=77.14 Aligned_cols=126 Identities=19% Similarity=0.241 Sum_probs=91.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+ +|++++++|+........+.+.+|+......+. ...+. -..++.|
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~----~s~~~----------------~~~KP~~ 158 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSIT----TSEEA----------------GFFKPHP 158 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEE----EHHHH----------------TBCTTSH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccc----ccccc----------------cccchhh
Confidence 46799999999996 589999999999999999999999965433221 11110 1234556
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-cCCHHhhhhcCccee-eCC-CCcHHHHhcccccccCCCchhHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGIA-MGI-AGTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~igva-mg~-~~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
+--..+++.++..++++++|||+ .+|+.+-+.||+... +.. .........+|+++. +...+.+++++
T Consensus 159 ~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 228 (230)
T d1x42a1 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVDE 228 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHHHHH
T ss_pred HHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC--CHHHHHHHHHH
Confidence 66788999999999999999998 589999999996432 211 223333556888875 56677777753
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.11 E-value=9.1e-07 Score=77.83 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=76.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+++|+++.++|+... .+..+.+.+|+......+ +..+ .....++.|
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i----~~s~----------------~~~~~Kp~~ 140 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEI----LTSQ----------------SGFVRKPSP 140 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEE----ECGG----------------GCCCCTTSS
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccc----cccc----------------cccccchhH
Confidence 4679999999999999999999999775 556778899987543221 1111 112234567
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeC
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMG 203 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg 203 (514)
+--..+++.++.+++++++|||+.+|+.+.+.+|+. |.+.
T Consensus 141 ~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~ 181 (204)
T d2go7a1 141 EAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL 181 (204)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS
T ss_pred HHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 778999999999999999999999999999999974 3444
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.08 E-value=1.9e-06 Score=73.00 Aligned_cols=91 Identities=8% Similarity=0.034 Sum_probs=70.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCCh-HHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNK-NTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+..++......+ ....+..
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~-------------------------~~~~kp~ 100 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQR-------------------------EIYPGSK 100 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEE-------------------------EESSSCH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceee-------------------------ecccCCC
Confidence 5789999999999999999999998765 4566667777765432211 1112234
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
|+.-.++++.++..++++++|||+.+|+.+.+.||+-
T Consensus 101 ~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 101 VTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVT 137 (164)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred hHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCE
Confidence 5566788999999999999999999999999999973
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.07 E-value=2.7e-06 Score=77.49 Aligned_cols=64 Identities=14% Similarity=0.203 Sum_probs=45.2
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCc-ceee--CCCCcHHHH---hcccccccCC
Q 010234 158 FSRAEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADI-GIAM--GIAGTEVAK---EASDMVLADD 221 (514)
Q Consensus 158 ~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~i-gvam--g~~~~~~~k---~~ad~v~~~~ 221 (514)
..+++|+--..+++.++..+++++||||+. +|+.+.++||+ +|.+ |....+... ..+|+++.+-
T Consensus 174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl 244 (250)
T d2c4na1 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSV 244 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSG
T ss_pred cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCH
Confidence 345566667889999999999999999996 59999999995 3433 432222212 2357887653
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.06 E-value=4.6e-06 Score=77.02 Aligned_cols=133 Identities=16% Similarity=0.209 Sum_probs=81.1
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe--
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR-- 160 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-- 160 (514)
-+++||+.+.++.|++.|+++.++||.-...+.++++++|+...+..++...+.-.+ .....-..
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~-------------~~~~~~~~~~ 200 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE-------------NGVLKGFKGE 200 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECT-------------TSBEEEECSS
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeC-------------CeeEeeccCC
Confidence 358999999999999999999999999999999999999987654333322211000 00000000
Q ss_pred -cChhhHH----HHHHHHhh--CCCEEEEEcCCcCCHHhhhhc---CcceeeC--CCCcH----HHHhcccccccCCCch
Q 010234 161 -AEPRHKQ----EIVRLLKE--DGEVVAMTGDGVNDAPALKLA---DIGIAMG--IAGTE----VAKEASDMVLADDDFS 224 (514)
Q Consensus 161 -~~p~~k~----~iv~~l~~--~~~~v~~iGDg~ND~~ml~~A---~igvamg--~~~~~----~~k~~ad~v~~~~~~~ 224 (514)
.....|. +...+++. ....++++|||.||+.|.+.+ +..++.| +...+ .-.+.-|+|+.++..-
T Consensus 201 ~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~ 280 (291)
T d2bdua1 201 LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESL 280 (291)
T ss_dssp CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBC
T ss_pred ccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCCh
Confidence 1122232 22233333 567899999999999999854 2233333 22222 2235568887655444
Q ss_pred hHHH
Q 010234 225 TIVS 228 (514)
Q Consensus 225 ~i~~ 228 (514)
.++.
T Consensus 281 ~v~~ 284 (291)
T d2bdua1 281 EVVN 284 (291)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 4433
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.02 E-value=5.6e-07 Score=79.47 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
++.|++.++++.|+ +++++.++|+.....+..+.+.+|+......+ ...++ .-..++.|
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i----~~~~~----------------~~~~KP~p 140 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAVT----ISADD----------------TPKRKPDP 140 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEEE----ECGGG----------------SSCCTTSS
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccccccccc----ccccc----------------cccchhhh
Confidence 46699999999997 57999999999999999999999986532211 11111 11234567
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCccee---eCCCCcHHHHhccccccc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIA---MGIAGTEVAKEASDMVLA 219 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igva---mg~~~~~~~k~~ad~v~~ 219 (514)
+-...+++.++..++++++|||+.+|+.+-+.||+... .|.+.... .+.+|+++.
T Consensus 141 ~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~i~ 198 (207)
T d2hdoa1 141 LPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNAD-HQKVAHRFQ 198 (207)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGG-GSCCSEEES
T ss_pred hhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhH-hhhcCcEeC
Confidence 77799999999999999999999999999999997643 34333332 445677664
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=97.87 E-value=1.1e-05 Score=73.63 Aligned_cols=69 Identities=28% Similarity=0.329 Sum_probs=48.9
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCc-ceee--CCCCcHHHHhc---ccccccCCCchhHHHHH
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADI-GIAM--GIAGTEVAKEA---SDMVLADDDFSTIVSAV 230 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~i-gvam--g~~~~~~~k~~---ad~v~~~~~~~~i~~~i 230 (514)
++.|.--..+++.++..+++++||||+. +|+.+.+.||+ +|.+ |.+..+..... +|+++. +...+.++|
T Consensus 185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred CCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 3445555888999999999999999995 69999999995 4554 43333333332 488875 566666655
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=97.82 E-value=8.6e-06 Score=71.64 Aligned_cols=109 Identities=22% Similarity=0.162 Sum_probs=65.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCCh--------HHHH-------HHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNK--------NTAE-------AICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~--------~~a~-------~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
++-|++.++|++|+++|++++++|..+. .... ...+..|+.-.. +...........
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~------- 118 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM--VLACAYHEAGVG------- 118 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE--EEEECCCTTCCS-------
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccce--EEEecccccccc-------
Confidence 4679999999999999999999997431 1111 112222221000 000000000000
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceee
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAM 202 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvam 202 (514)
........+.+++|.--.++++.++...++++||||+.+|+.+-+.||+ ++.+
T Consensus 119 -~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v 172 (209)
T d2o2xa1 119 -PLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWL 172 (209)
T ss_dssp -TTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEE
T ss_pred -cccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEE
Confidence 0000001112456667789999999999999999999999999999998 4544
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.78 E-value=2.6e-05 Score=67.23 Aligned_cols=108 Identities=14% Similarity=0.100 Sum_probs=76.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.|++.+.|+.|+++|++++++|+.+.... ...+.+++...... .+.+++ .-..++.|
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~----i~~~~~----------------~~~~KP~p 137 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTE----VVTSSS----------------GFKRKPNP 137 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEE----EECGGG----------------CCCCTTSC
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccccc----cccccc----------------ccccCCCH
Confidence 4679999999999999999999999876554 56788888653222 111111 11223455
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCCCCcHHHHhccc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASD 215 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~~~~~~~k~~ad 215 (514)
+--..+++.++. +.+++|||+.+|+.+-+.||+-...= ++.+..++..|
T Consensus 138 ~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d 186 (187)
T d2fi1a1 138 ESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 186 (187)
T ss_dssp HHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcC
Confidence 666777777764 56999999999999999999874432 45555565554
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.78 E-value=3.3e-05 Score=69.53 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=89.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.|++.++++.|+ +|++++++|+.+........+.+|+......+. ...+ .-..+++|
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~----~s~~----------------~~~~KP~p 167 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIV----IGGE----------------QKEEKPAP 167 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEE----EGGG----------------SSSCTTCH
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccc----cccc----------------cccchhhh
Confidence 47799999999998 589999999999999999999999876443221 1111 11235566
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-CCHHhhhhcCcc-eeeCCC---CcHHHHhcccccccCCCchhHHHHHHH
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG-IAMGIA---GTEVAKEASDMVLADDDFSTIVSAVGE 232 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~ig-vamg~~---~~~~~k~~ad~v~~~~~~~~i~~~i~~ 232 (514)
+--..+++.++..++++++|||+. +|+.+-+.||+. +..-+. ........+|+++. +...+..++++
T Consensus 168 ~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 168 SIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred hhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 666889999999999999999995 899999999986 433111 11122334677765 45566666643
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=97.72 E-value=1.2e-05 Score=73.04 Aligned_cols=61 Identities=23% Similarity=0.237 Sum_probs=44.8
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcC-CHHhhhhcCc-ceee--CCCCcHHHHhc---ccccccC
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVN-DAPALKLADI-GIAM--GIAGTEVAKEA---SDMVLAD 220 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~N-D~~ml~~A~i-gvam--g~~~~~~~k~~---ad~v~~~ 220 (514)
+++|+--..+++.++..+++++||||+.+ |+.+-++||+ +|.+ |....+..+.. +|+++.+
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 55667778999999999999999999965 9999999997 5555 32223322332 3788754
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=97.64 E-value=2.4e-05 Score=69.04 Aligned_cols=116 Identities=11% Similarity=0.164 Sum_probs=86.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecCh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAEP 163 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 163 (514)
.+.+++.++++.+++.|+++.++|+..........+..++......+... . ..-..+++|
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s----~----------------~~~~~KP~p 152 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSV----D----------------PVQVYKPDN 152 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEES----G----------------GGTCCTTSH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeee----e----------------eeeccccHH
Confidence 46789999999999999999999999999999999988886544332110 0 011234567
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcceeeCC---CCcHHHHhccccccc
Q 010234 164 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGI---AGTEVAKEASDMVLA 219 (514)
Q Consensus 164 ~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~igvamg~---~~~~~~k~~ad~v~~ 219 (514)
+--..+++.++..++++++|||+.+|+.+-+.||+-.+.-+ ...+.....+|+++.
T Consensus 153 ~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~ 211 (220)
T d1zrna_ 153 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT 211 (220)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES
T ss_pred HHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC
Confidence 77788999999999999999999999999999997654321 122222344677764
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=97.60 E-value=1.1e-05 Score=67.83 Aligned_cols=103 Identities=13% Similarity=0.084 Sum_probs=62.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCCh--------HHHH-------HHHHHcCCcccCccceecccChHHHhhhhHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNK--------NTAE-------AICREIGVFECNEDISLKSLTGKEFMEMHDKKA 148 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~--------~~a~-------~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (514)
++-|++.++|+.|+++|++++++|..+. .... ......|+.... ++.....+.
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--i~~~~~~~~---------- 97 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDE--VLICPHLPA---------- 97 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEE--EEEECCCGG----------
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccce--eeecccccc----------
Confidence 4579999999999999999999997641 1111 112222221100 000000000
Q ss_pred HHhhcCceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc-eeeC
Q 010234 149 HLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-IAMG 203 (514)
Q Consensus 149 ~~~~~~~~i~~~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig-vamg 203 (514)
+..-+.++.|.--.++++.++..+++++||||+..|+.|-+.||+. +.++
T Consensus 98 -----~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~ 148 (161)
T d2fpwa1 98 -----DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 148 (161)
T ss_dssp -----GCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred -----ccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEEC
Confidence 0111125567777889999999999999999999999999999974 4443
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.59 E-value=1e-05 Score=66.92 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=61.2
Q ss_pred cCCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhc-CceEEE-
Q 010234 82 RDPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQS-GGLLFS- 159 (514)
Q Consensus 82 ~~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~- 159 (514)
++++.|++.+.++.|+++|++++++|||+........+.++. ........... ....+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~-------------------~~~~~~~~~~~~~~~~~~~ 94 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM-------------------TRKWVEDIAGVPLVMQCQR 94 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH-------------------HHHHHHHTTCCCCSEEEEC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH-------------------HhhhhhhcCCCcEEEeecc
Confidence 467889999999999999999999999974322111111110 00000000000 011221
Q ss_pred -----ecChhhHHHHHHHHhhCCCE-EEEEcCCcCCHHhhhhcCcc
Q 010234 160 -----RAEPRHKQEIVRLLKEDGEV-VAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 160 -----~~~p~~k~~iv~~l~~~~~~-v~~iGDg~ND~~ml~~A~ig 199 (514)
+..+.-|..++..+...+.+ +++|||...|++|.+.+|+-
T Consensus 95 ~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 95 EQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred cccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 22335567777777666555 57889999999999999964
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.56 E-value=2.8e-05 Score=68.67 Aligned_cols=99 Identities=12% Similarity=0.106 Sum_probs=76.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.|++.+.++.|++.|+++.++|++.. +....+..|+......+ +.+. .....++.
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i----~~~~----------------~~~~~KP~ 147 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAI----ADPA----------------EVAASKPA 147 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEE----CCTT----------------TSSSCTTS
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccccc----cccc----------------cccccccC
Confidence 35779999999999999999999999764 56778888886643322 1111 11223556
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceeeC
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAMG 203 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvamg 203 (514)
|+--..+++.++..++++++|||+.+|+.+.+.||+ +|.++
T Consensus 148 ~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred hHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC
Confidence 677788999999999999999999999999999996 45454
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.30 E-value=0.00019 Score=63.01 Aligned_cols=104 Identities=11% Similarity=0.066 Sum_probs=73.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCC----hHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEE
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDN----KNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFS 159 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (514)
++.|++.+.+++|+++|+++.++|+.. ...........|+......+ +..++ .-..
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i----~~s~~----------------~~~~ 156 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFL----IESCQ----------------VGMI 156 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEE----EEHHH----------------HSCC
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhcee----eehhh----------------ccCC
Confidence 578999999999999999999999743 33344445555654432211 11111 0123
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceeeCCCCcH
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAMGIAGTE 208 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvamg~~~~~ 208 (514)
++.|+.-..+++.++..++++++|||+.+|+.+-+.||+ +|-+. ++.+
T Consensus 157 KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~ 205 (222)
T d1cr6a1 157 KPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTAS 205 (222)
T ss_dssp TTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSH
T ss_pred CCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-Ccch
Confidence 566777889999999999999999999999999999996 45444 4444
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.19 E-value=2.5e-05 Score=68.80 Aligned_cols=100 Identities=12% Similarity=0.041 Sum_probs=69.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHH----HHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEE
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEA----ICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFS 159 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~----ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (514)
++.|++.++++.|+++|++++++|+........ .....++......+ +...+ .-..
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i----~~s~~----------------~~~~ 158 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFL----IESCQ----------------VGMV 158 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEE----EEHHH----------------HTCC
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEE----Eeccc----------------cccc
Confidence 468999999999999999999999765432222 22223332211111 11110 0112
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceeeC
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAMG 203 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvamg 203 (514)
+++|+--..+++.++..++++++|||+..|+.+-+.+|+ +|.+.
T Consensus 159 KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 159 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred hhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 456777789999999999999999999999999999998 55554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.17 E-value=0.00046 Score=60.54 Aligned_cols=126 Identities=10% Similarity=0.133 Sum_probs=85.1
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
..+.|++.+.+++|+ .+..++|+.....+....+.+|+........ ..+++. ..-.+++.
T Consensus 84 ~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~---~~~~~~--------------~~~~~KP~ 143 (222)
T d2fdra1 84 VKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHI---YSAKDL--------------GADRVKPK 143 (222)
T ss_dssp CCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCE---EEHHHH--------------CTTCCTTS
T ss_pred cchhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceee---cccccc--------------cccccccC
Confidence 457788888887665 5668999999999999999999976543211 111110 00123445
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc---ceeeCCCC----cH-HHHhcccccccCCCchhHHHHH
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI---GIAMGIAG----TE-VAKEASDMVLADDDFSTIVSAV 230 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i---gvamg~~~----~~-~~k~~ad~v~~~~~~~~i~~~i 230 (514)
|+.-.++++.++.+++++++|||+.+|+.+-+.||+ ||+-|... .+ ....-||+++.+ ...+..++
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll 217 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR--MQDLPAVI 217 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECC--HHHHHHHH
Confidence 666788999999999999999999999999999995 44333211 11 222348888864 44455544
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=97.00 E-value=0.00021 Score=61.48 Aligned_cols=89 Identities=18% Similarity=0.305 Sum_probs=62.9
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCC----hHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEe
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDN----KNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSR 160 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (514)
+.|++.+.++.++++|++++.+|||. ..+++.+.+.+|+...... .+++..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~-------------------------~vll~~ 141 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN-------------------------PVIFAG 141 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC-------------------------CCEECC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc-------------------------ceEeeC
Confidence 45899999999999999999999997 3455566666888543221 223332
Q ss_pred c--ChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceee
Q 010234 161 A--EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAM 202 (514)
Q Consensus 161 ~--~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvam 202 (514)
. ....|++.++. ...++++||..+|+.+.+.||+ +|-+
T Consensus 142 ~~~~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 142 DKPGQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCTTCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCCCchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 2 22345555554 4678999999999999999985 4543
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=96.54 E-value=0.0014 Score=58.07 Aligned_cols=95 Identities=9% Similarity=0.117 Sum_probs=74.1
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 83 DPPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 83 ~~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
.++.+++.+++++|+ |+++.++|+.+...+....+..|+......+. .+++ .-..++.
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~----~s~~----------------~~~~KP~ 149 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVI----SVDA----------------KRVFKPH 149 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEE----EGGG----------------GTCCTTS
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccccc----cccc----------------ccccCcc
Confidence 356789999999885 78899999999999999999998865443221 1111 1123556
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
|+--..+++.++..++++++|||+.+|+..-+.||+.
T Consensus 150 p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 150 PDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 7777889999999999999999999999999999964
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.00011 Score=62.85 Aligned_cols=100 Identities=18% Similarity=0.217 Sum_probs=68.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHc-CCcccCccceecccChHHHhhhhHHHHHHhhcCceEEEecC
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREI-GVFECNEDISLKSLTGKEFMEMHDKKAHLRQSGGLLFSRAE 162 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 162 (514)
++.+++.+.+..++++|+++.++|+.+...+....... |+......+ +..++ .-..++.
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v----~~s~~----------------~~~~Kp~ 143 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHI----YLSQD----------------LGMRKPE 143 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEE----EEHHH----------------HTCCTTC
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccce----eeccc----------------ccccccc
Confidence 46899999999999999999999987654443322222 221111100 00000 0112456
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCc-ceeeC
Q 010234 163 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GIAMG 203 (514)
Q Consensus 163 p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~i-gvamg 203 (514)
|+--..+++.++..++++++|||+.+|+.+-+.||+ +|.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 144 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred hHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 666688899999999999999999999999999997 56554
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.04 E-value=0.0059 Score=52.55 Aligned_cols=147 Identities=18% Similarity=0.215 Sum_probs=85.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHHHHHHcCCccc--Cccc--eecccChH---HHhhhhHHH-----HHHh
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFEC--NEDI--SLKSLTGK---EFMEMHDKK-----AHLR 151 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ia~~~gi~~~--~~~~--~~~~~~~~---~~~~~~~~~-----~~~~ 151 (514)
.+-|++.++++.+++. ....++|-.-..-+.++++.+|+... ...+ ....+... ++..+.+.. ..+.
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~ 159 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 159 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHH
Confidence 4679999999999876 67777777778889999999999522 1111 11111111 111111100 0000
Q ss_pred hcCceEEEe------------cChhhHHHHHHHHh--hCCCEEEEEcCCcCCHHhhhhcC--cceeeCCCCcHHHHhccc
Q 010234 152 QSGGLLFSR------------AEPRHKQEIVRLLK--EDGEVVAMTGDGVNDAPALKLAD--IGIAMGIAGTEVAKEASD 215 (514)
Q Consensus 152 ~~~~~i~~~------------~~p~~k~~iv~~l~--~~~~~v~~iGDg~ND~~ml~~A~--igvamg~~~~~~~k~~ad 215 (514)
..-..++.+ .-...|..+++..- +.....+++||+..|.+||+.|. =|+|+.-||.+-+...||
T Consensus 160 e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~ 239 (308)
T d1y8aa1 160 RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHAD 239 (308)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCS
T ss_pred HHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccccc
Confidence 000000000 01234444443321 12234599999999999999874 255555588888888899
Q ss_pred ccccCCCchhHHHHHH
Q 010234 216 MVLADDDFSTIVSAVG 231 (514)
Q Consensus 216 ~v~~~~~~~~i~~~i~ 231 (514)
+.+.+.+...++.+++
T Consensus 240 VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 240 VVIISPTAMSEAKVIE 255 (308)
T ss_dssp EEEECSSTHHHHHHHH
T ss_pred eEEeccchhHHHHHHH
Confidence 9998888777666553
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=88.08 E-value=0.32 Score=37.29 Aligned_cols=33 Identities=3% Similarity=-0.033 Sum_probs=28.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEECCCChHHHHH
Q 010234 84 PPRNEVHQAIEDCRAAGIRVMVITGDNKNTAEA 116 (514)
Q Consensus 84 ~l~~~~~~~I~~l~~~Gi~v~i~TG~~~~~a~~ 116 (514)
++-+++.+.|++|++.|+++++.|+|.......
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~ 53 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDE 53 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHH
Confidence 467899999999999999999999998765443
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.64 E-value=0.6 Score=38.91 Aligned_cols=26 Identities=15% Similarity=0.346 Sum_probs=23.7
Q ss_pred CChhHHHHHHHHHHcCCcEEEECCCC
Q 010234 85 PRNEVHQAIEDCRAAGIRVMVITGDN 110 (514)
Q Consensus 85 l~~~~~~~I~~l~~~Gi~v~i~TG~~ 110 (514)
+.|++.++|+.|+++|+.++++|.-+
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~ 76 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQM 76 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcc
Confidence 47999999999999999999999853
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.12 E-value=0.21 Score=42.30 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=36.2
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCcCCHHhhhhcCcc
Q 010234 160 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 199 (514)
Q Consensus 160 ~~~p~~k~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ig 199 (514)
++.|+--..+++.++..++++++|||+.+|+.+-+.||+-
T Consensus 159 KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ 198 (225)
T d2g80a1 159 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIA 198 (225)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred CCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCE
Confidence 5667777999999999999999999999999999999973
|