Citrus Sinensis ID: 010330

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510---
Protein Sequence
MPVIASPSYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSPGKWHSVSTNSTEAAQRKSAKVRDWKMHCQGIKSVGSWWNSVKCFLGQRQSQERFASVGVELPAPLWSSKPDSFLMASVVTVFMITSIFNTVGKTDKWTSVRQRNQRRL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccEEEEEEEEHHHHccccEEEEEEccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEEEccccccccEEEccccccccccEEEEEEEEEEEEcccccccccEEEEcccccccccccccccEEEEEEEccccccEEccccEEEEEEccHHHHcccccEEEcccccEEEEEcccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccHHHHccccccccccHHHHHHHHHcccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccEEEcccEEEEEccccccccEEccccccccccccccEEEEccccHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEHHHHHcccEEEEEEccEEEccccccccccccccccccccccccEEEEEEEccccEEEEEEEEccccccccEEEcccccccccccEEEEEEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEcccccEEEccccEEEEEEEEHHHHHHccEEEEEccccEEEEEcccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHccccccccccccccHHHHcccccccccccccccccccccHHHHHHHHccccccHHHEEEEccccccEEEccccccccHHHHHEHEHHHHHHHHHcccccccEHHHHHcccc
Coil and Loop (DISEMBL)
mpviaspsyvnLKLHLSTsfsfkwnycsgnnrshrrgMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLArkyhpdinkspgaeeKFKEISSAYEvlsddekrsvydrfgeagitgeydglsntsqgvdpfelysaffggsdglfggvgeagginfnfgnkgnfgldirydlhlsfeesifggqrgievscfetcdscggtgakssnciqsckacwgrggvlktqrtpfglisqvstcskcggdgkiiidhcrrcggngevqskrsmkvvippgvsngatmqirgegnfdRRRSLAGDLFVALHvdekqgihrdgLNLFSKISVDYTEAILGTSMEVetvegmkdlripsgvqpgdtvklqqmgvpdinnpsvrgdhLFIVNVlipkdisdpERALVEEIAFlkspgkwhsvstnsTEAAQRKSAKVRDWKMHCQGIKSVGSWWNSVKCFLGQRQSQERFASvgvelpaplwsskpdsflMASVVTVFMITSIFNTvgktdkwtSVRQRNQRRL
Flexible Loop (DISEMBL)
mpviaspsyvNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLArkyhpdinkspgaeekFKEISSAyevlsddekrsVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGngevqskrsmkvvippgvsngatmqirgEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFlkspgkwhsvstnsTEAAQRKSAKVRDWKMHCQGIKSVGSWWNSVKCFLGQRQSQERFASVGVELPAPLWSSKPDSFLMASVVTVFMITSIfntvgktdkwtsvrqrnqrrl
Low Complexity Region (SEG)
MPVIASPSYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAffggsdglfggvgEAgginfnfgnkgnfgLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSPGKWHSVSTNSTEAAQRKSAKVRDWKMHCQGIKSVGSWWNSVKCFLGQRQSQERFASVGVELPAPLWSSKPDSFLMASVVTVFMITSIFNTVGKTDKWTSVRQRNQRRL
Disordered region (IsUnstruct)
*******SYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLA**********************************VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEV*******VVIP**********I***GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLR****************GVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSPGKW*****************VRDWKMHCQGIKSVGSWWNSVKCFLGQRQSQERFASVGVELPAPLWSSKPDSFLMASVVTVFMITSIFNTVGKTDKWT**********
Disordered Region (DISOPRED)
***************************************RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT*********SQGVDPFELYSAFFGGSDGLF************************YDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ**********RSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALV*********************************************WWNSVKCFLGQRQSQERFASVG**************FLMASVVTVFMITSIFNTVGKTDKWTSV*Q******
Disordered Region (DISEMBL)
MPVIASPSYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSP***********************WKMHCQGIKSVGSWWNSVKCFLGQRQSQERFASVGVELPAPLWSSKPDSFLMASVVTVFMITSIFNTVGKTDK************
Disordered Region (DISPRO)
*PVIASPSYVNLKLHLSTSFSFKWNYC********RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG**S*NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK************************************GSWWNSVKCFLGQRQSQERFASVGVELPAPLWSSKPDSFLMASVVTVFMITSIFNTVGKTDKWTSV********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPVIASPSYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSPGKWHSVSTNSTEAAQRKSAKVRDWKMHCQGIKSVGSWWNSVKCFLGQRQSQERFASVGVELPAPLWSSKPDSFLMASVVTVFMITSIFNTVGKTDKWTSVRQRNQRRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	513	2.2.26 [Sep-21-2011]
Q8DKR7	373	Chaperone protein DnaJ OS	yes	no	0.670	0.922	0.439	2e-84
B8HLD2	374	Chaperone protein DnaJ OS	yes	no	0.686	0.941	0.434	3e-84
Q55505	377	Chaperone protein DnaJ 1	N/A	no	0.695	0.946	0.438	3e-80
B0JW23	374	Chaperone protein DnaJ OS	yes	no	0.684	0.938	0.419	3e-80
Q7VEJ6	378	Chaperone protein DnaJ OS	yes	no	0.701	0.952	0.425	1e-79
B0CAZ0	374	Chaperone protein DnaJ OS	yes	no	0.680	0.933	0.417	2e-79
Q114R3	374	Chaperone protein DnaJ OS	yes	no	0.684	0.938	0.420	3e-79
B7KEJ8	375	Chaperone protein DnaJ OS	yes	no	0.693	0.949	0.418	2e-78
B2J3J3	375	Chaperone protein DnaJ OS	yes	no	0.690	0.944	0.428	5e-78
Q8YUA5	376	Chaperone protein DnaJ OS	yes	no	0.684	0.933	0.451	1e-77

>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2

 Score =  313 bits (802), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 161/366 (43%), Positives = 225/366 (61%), Gaps = 22/366 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           D+Y  L V ++A  +E+K +YR+LARKYHPD+NK PGAEEKFKEI+ AYEVLSD + R+ 
Sbjct: 4   DFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARAN 63

Query: 105 YDRFGEAGITG-EYDGLSNTSQG-VDPF-ELYSAFFGGSDGLFGGVGEAGGINFNFGNK- 160
           YDRFGEAG++G    G S+   G +  F +++  FFGG               F   ++ 
Sbjct: 64  YDRFGEAGVSGVGAAGFSDFGIGDMGGFADIFETFFGG---------------FTTSSRR 108

Query: 161 ---GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGR 217
                 G D+RYDL L F E++FGG++ I ++  ETC +C GTGAK      +C  C G 
Sbjct: 109 QQGPTRGEDLRYDLKLEFREAVFGGEKEIRINHLETCKTCQGTGAKPGTRPVTCSTCGGV 168

Query: 218 GGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 277
           G V ++ RTPFG  +Q++TC  CGG G +I D C  CGG G +Q  + +K+ IP GV NG
Sbjct: 169 GQVRRSARTPFGSFTQLTTCPTCGGSGVVIEDRCESCGGQGHIQVSKKLKITIPAGVDNG 228

Query: 278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVE 337
             +++ GEG+   R    GDL+V L V       R+G N+ S+I + Y +AILG  + V 
Sbjct: 229 TRLRVSGEGDAGLRGGPPGDLYVYLFVQPDPEFQREGNNILSRIKISYLQAILGCRISVS 288

Query: 338 TVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVE 397
           TV+G  +L+IP+G QPG  + L+  GVP + NP  RGDHL  V+V IP  I+  ER L+E
Sbjct: 289 TVDGEAELKIPAGTQPGTVLVLEGRGVPRVGNPVARGDHLITVDVEIPTHITHEERELLE 348

Query: 398 EIAFLK 403
           ++A ++
Sbjct: 349 KLAKIR 354

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
Thermosynechococcus elongatus (strain BP-1) (taxid: 197221)

>sp|B8HLD2|DNAJ_CYAP4 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1

 Score =  312 bits (800), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 156/359 (43%), Positives = 223/359 (62%), Gaps = 7/359 (1%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A  +++K +YR+LARKYHPD+NK  GAEE+FKEI+ AYEVLSD E R+ 
Sbjct: 4   DYYDILGVSRDAGQEDLKQAYRRLARKYHPDVNKEAGAEERFKEINRAYEVLSDPETRAR 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDRFGEAG++G   G  +        +++ + F G    FGGVG          ++G+  
Sbjct: 64  YDRFGEAGVSGAAAGYGDMGDMGGFADIFESIFSG----FGGVGAGTSRRRTGPSRGD-- 117

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D+R+DL L F E+IFGG++ I ++  ETC +C G+GAK     ++C  C G G V +  
Sbjct: 118 -DLRFDLKLEFREAIFGGEKQIRITHLETCTTCNGSGAKPGTKPRTCGTCGGAGQVRRAT 176

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPFG  +QVS C  C G G++I D C  CGGNG+ Q  + +K+ IP GV  G  +++  
Sbjct: 177 RTPFGSFTQVSVCPTCNGKGQVIEDKCETCGGNGQAQVTKKLKITIPAGVDTGTRLRVSN 236

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKD 344
           EG+  ++   AGDL+V L V E     R+G+N+ S++ + Y +AILG+ + V TV+G  +
Sbjct: 237 EGDAGQQGGPAGDLYVYLFVQEDPEFRREGINILSEVKISYLQAILGSRLMVNTVDGEVE 296

Query: 345 LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 403
           L IP G QP   + L+  GVP + NP  RGDHL  V + IP  IS  ER L+E++A ++
Sbjct: 297 LTIPPGTQPNTVLTLENHGVPRLGNPVSRGDHLITVLLEIPTRISAEERELLEKLAKIR 355

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Cyanothece sp. (strain PCC 7425 / ATCC 29141) (taxid: 395961)

>sp|Q55505|DNAJ1_SYNY3 Chaperone protein DnaJ 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dnaJ1 PE=3 SV=1

 Score =  299 bits (766), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 161/367 (43%), Positives = 221/367 (60%), Gaps = 10/367 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY TL V ++A   EIK +YR+LARKYHPD+NK PGAEEKFKEI+ AYEVLS+ E R  
Sbjct: 4   DYYQTLGVTRDADKDEIKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQR 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFEL--YSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
           YD+FGEAG++G        +QG D   +  ++  F    G FGG            N   
Sbjct: 64  YDQFGEAGVSG------GGAQGFDVGNMGDFADIFETIFGGFGGGMGGQQRGRRRANGPT 117

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
            G D+R DL L+F+E+IFGG++ I +   E+C  C GTGAK    +++C  C G G V +
Sbjct: 118 RGDDLRLDLQLTFQEAIFGGEKEIRIPHLESCQVCEGTGAKPGTGVKTCGTCNGAGQVRR 177

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
             RTPFG  +QVS C  C G G++I   C  C G G  Q  + +K+ IP GV +G  +++
Sbjct: 178 ATRTPFGSFAQVSACPTCNGSGEVIEQKCEACNGVGRKQETKKLKITIPAGVDDGTRLRV 237

Query: 283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM 342
             EG+   R   AGDL+V L V+  +   R+G+N+ S + V Y +AILG  +EV+TV+G 
Sbjct: 238 GKEGDAGLRGGPAGDLYVFLMVETDKHFVREGMNIRSNLEVSYLQAILGCRLEVDTVDGK 297

Query: 343 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 402
            +L IP+G QP   + L+  GVP + N ++RGDHL  V V IP  I+  ER L+E +A +
Sbjct: 298 AELTIPAGTQPNTVLTLENKGVPKLGNATIRGDHLITVKVQIPTRINSEERELLERLATI 357

Query: 403 KSPGKWH 409
           K  G+ H
Sbjct: 358 K--GESH 362

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|B0JW23|DNAJ_MICAN Chaperone protein DnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1

 Score =  299 bits (766), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 152/362 (41%), Positives = 216/362 (59%), Gaps = 11/362 (3%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           TDYY  L V ++A  ++IK +YR+LARKYHPD+NK PGAEE FKEI+ AYE+LS+ E R+
Sbjct: 3   TDYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRN 62

Query: 104 VYDRFGEAGITGEYDGLSNTSQG--VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG 161
            YDRFGEAG++G   G    + G   D FE   + FGG  G        G          
Sbjct: 63  RYDRFGEAGVSGGAAGFDPDNMGGFADIFETIFSGFGGMGGQATARRRTGPTR------- 115

Query: 162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
             G D+R D  L F E++FGG++ I +   ETC +C G+GA+     ++C  C G G V 
Sbjct: 116 --GEDLRLDFRLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTSSRTCTTCSGTGQVR 173

Query: 222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
           +  RTPFG  +QVS C  C G G++I + C  CGG+G  Q  + +K+ IP GV NG  ++
Sbjct: 174 RATRTPFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRRQETKKLKITIPAGVDNGMKLR 233

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG 341
           +  EG+   +    GDLFV L V+      R+G ++ S I++ Y +AILG +++V TV+G
Sbjct: 234 VAREGDAGLKGGPPGDLFVYLTVETDAEFQREGNDIKSDITISYIQAILGCTIKVNTVDG 293

Query: 342 MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAF 401
            +DL IP+G QP   + L+  GVP + NP  RGDH   V + IP  ++  ER L+E++A 
Sbjct: 294 QEDLTIPAGTQPNTVLILENKGVPKLGNPVSRGDHRITVKISIPTRVTGEERELLEKLAK 353

Query: 402 LK 403
           ++
Sbjct: 354 VR 355

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Microcystis aeruginosa (strain NIES-843) (taxid: 449447)

>sp|Q7VEJ6|DNAJ_PROMA Chaperone protein DnaJ OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) GN=dnaJ PE=3 SV=1

 Score =  297 bits (761), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 159/374 (42%), Positives = 219/374 (58%), Gaps = 14/374 (3%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
            D+Y TL V +NA    +K +YR+LAR+YHPDINK  GAEE+FKEI  AYEVL D EKR+
Sbjct: 2   ADFYDTLGVNRNADADSLKRAYRRLARQYHPDINKEAGAEERFKEIGRAYEVLGDPEKRA 61

Query: 104 VYDRFGEAGITGE--YDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG 161
            YD+FGEAG+ G      + +     D FE + + FGG           G          
Sbjct: 62  RYDQFGEAGLGGSAGMPDMGDMGGFADIFETFFSGFGGPGSSGARTQRRGPQQ------- 114

Query: 162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
             G D+RYDL + F +++FG +R I++   ETCD C GTGAK      +C  C G G V 
Sbjct: 115 --GDDLRYDLTIDFNQAVFGQEREIKIPHLETCDVCRGTGAKPGTGPTTCSTCGGAGQVR 172

Query: 222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
           +  RTPFG  +QVS C  C G G++I D C+ CGG G  Q ++ +++ IP GV  G  ++
Sbjct: 173 RATRTPFGSFTQVSDCPTCSGSGQVISDSCQSCGGQGVKQVRKKLRINIPAGVDTGTRLR 232

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG 341
           + GEGN   R   +GDL+V L V     + RDGLN+ S+++V Y +AILG ++EV+TV+G
Sbjct: 233 VSGEGNAGPRGGPSGDLYVFLKVKSHARLKRDGLNIHSEVNVSYLQAILGDTIEVDTVDG 292

Query: 342 MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAF 401
              L+IPSG QP   + L   G+P + NP  RG+H   VN+ IP  ++D E+ L+E++A 
Sbjct: 293 PTTLQIPSGTQPSAVLILDNKGIPKLGNPVARGNHCISVNIKIPSRLTDDEKILLEKLAI 352

Query: 402 L---KSPGKWHSVS 412
               K P   H  S
Sbjct: 353 YYSAKGPQNHHHNS 366

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) (taxid: 167539)

>sp|B0CAZ0|DNAJ_ACAM1 Chaperone protein DnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1

 Score =  296 bits (759), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 152/364 (41%), Positives = 215/364 (59%), Gaps = 15/364 (4%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A   E+K SYR+LARKYHPD+NK PGAE+KFKEI+ AYE LSD + R  
Sbjct: 4   DYYDILGVSRSADPDELKRSYRRLARKYHPDVNKEPGAEDKFKEINKAYETLSDPQMRGR 63

Query: 105 YDRFGEAGITGE----YDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           YD+FGEAG++      Y    +     D FE + + FGGS     G   +G         
Sbjct: 64  YDQFGEAGVSSAAGAGYQDFGDFGGFADIFETFFSGFGGSPQ--SGRRRSGPAR------ 115

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
              G D+R+DL L F E++FGG++ I +S  E+C +C GTGAK     Q+C  C G G V
Sbjct: 116 ---GEDLRFDLKLKFREAVFGGEQQIRISHLESCKTCEGTGAKPGTRPQTCSTCQGSGQV 172

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
            +  RTP G  +QVS C  C G G+++ + C  CGG G+ Q  + +++ IP GV  G  +
Sbjct: 173 RRMTRTPLGNFTQVSVCPTCNGQGQVVTEKCDSCGGRGQNQVSKKLQIKIPAGVDTGTRL 232

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE 340
           ++  EG+  ++    GDL+V L V E     RDG N+ S+  + Y +AILG  + V+TV+
Sbjct: 233 RVSNEGDAGQKGGPPGDLYVYLFVQEDSEFRRDGTNVLSEFKISYLQAILGAQLPVKTVD 292

Query: 341 GMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
           G + + IP+G QPG  + L+  GVP + NP  RGDHL  V + IP  IS  ER L+ ++A
Sbjct: 293 GEETITIPAGTQPGTVLTLENHGVPRLGNPVSRGDHLITVIIDIPNRISTEERELLVQLA 352

Query: 401 FLKS 404
            +++
Sbjct: 353 SIRA 356

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Acaryochloris marina (strain MBIC 11017) (taxid: 329726)

>sp|Q114R3|DNAJ_TRIEI Chaperone protein DnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1

 Score =  296 bits (757), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 151/359 (42%), Positives = 216/359 (60%), Gaps = 8/359 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A  +E+K +YR+LARKYHPD+NK PG+EE+FKEI+ AYE+LSD E ++ 
Sbjct: 4   DYYEILGVSRSADKEELKRAYRRLARKYHPDVNKEPGSEERFKEINRAYEILSDPEMKAR 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           +DRFGEAG++G      +T       +++ +FF G    FGG G  G            G
Sbjct: 64  FDRFGEAGVSGGAASGFSTDFSDSFADIFESFFSG----FGGAGTQG----RRRTGPVRG 115

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D+R DL+L F E+IFGG + + +   ETC +C G+GAK     Q+C  C G G V +  
Sbjct: 116 DDLRLDLNLEFIEAIFGGDKELTIKHLETCGTCNGSGAKPGTKPQTCSTCGGTGQVRRAT 175

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPF   +QVS C  C G G+II + C  CGG G+ ++ + +K+ IP GV NG  +++  
Sbjct: 176 RTPFSSFTQVSVCPSCNGSGQIIEEKCVDCGGRGQKEATKKIKITIPGGVDNGTRLRVSN 235

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKD 344
           EG+  R     GDL+V L V       RDG+N+ S+I + Y +AILG  +E+ TV+G  +
Sbjct: 236 EGDAGRMGGPPGDLYVFLSVKNHPEFQRDGINIISQIKISYLQAILGCCLEINTVDGKTE 295

Query: 345 LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 403
           L IPSG QP   + L+  GVP + N   RG HL  + + IP  I+  E+ L+E++A +K
Sbjct: 296 LTIPSGTQPNAILTLEDKGVPRLGNSVSRGAHLITIEIDIPTKITPEEKELLEKLAKIK 354

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Trichodesmium erythraeum (strain IMS101) (taxid: 203124)

>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1

 Score =  293 bits (751), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/366 (41%), Positives = 219/366 (59%), Gaps = 10/366 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A   EIK +YR+LARKYHPD+NK  GAEE+FKEI+ AYE+LS+ E R+ 
Sbjct: 4   DYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRAR 63

Query: 105 YDRFGEAGIT-GEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNF 163
           YDRFGEAG++ G   G      G    +++   F G    FGG+G         G     
Sbjct: 64  YDRFGEAGVSSGAGSGFEYGDMG-GIADIFETIFSG----FGGMGTGTSSRRRTGPV--R 116

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G D+R D  L+F E++FGG++ I +   ETC  C G+GAK     ++C  C G G V + 
Sbjct: 117 GDDLRLDFKLNFREAVFGGEKEIRIRHLETCQVCEGSGAKPGTGSRTCSTCSGSGQVRRA 176

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
            RTPFG  +QVS C  C G G++I + C  CGG+G  Q  + +K+ IP GV NG  +++ 
Sbjct: 177 TRTPFGTFAQVSVCPTCNGSGEVIEEKCEACGGSGRKQETKKLKITIPAGVDNGTRLRVS 236

Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMK 343
            EG+  +R    GDL+V L V+  +   R+G+++ S+IS+ Y +AILG  + V TV+G +
Sbjct: 237 REGDAGQRGGPPGDLYVYLSVETDEEFQREGIDIKSEISISYLQAILGCRLSVNTVDGPE 296

Query: 344 DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 403
           ++ I  G QP   + L   GVP + NP  RGDHL  +NV IP  ++  ER L+E++A ++
Sbjct: 297 EITIEPGTQPNTVLTLPNRGVPKLGNPVARGDHLITINVSIPTRVNPEERELLEKLAKIR 356

Query: 404 SPGKWH 409
             G+ H
Sbjct: 357 --GESH 360

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Cyanothece sp. (strain PCC 7424) (taxid: 65393)

>sp|B2J3J3|DNAJ_NOSP7 Chaperone protein DnaJ OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dnaJ PE=3 SV=1

 Score =  292 bits (747), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 154/359 (42%), Positives = 219/359 (61%), Gaps = 5/359 (1%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++   +E+K +YR+LARKYHPD+NK PGAE++FKEI+ AYEVLS+ E R+ 
Sbjct: 4   DYYEILGVSRDTDKEELKQAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETRAR 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDRFG  G++G   G  +        +++ + F    G  GG+G         G     G
Sbjct: 64  YDRFGPEGVSGAGAGFQDVGDMGGFADIFESIF---SGFAGGMGSPTQQRRRSGPA--RG 118

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D+R DL L F E++FGG++ I +S  E C+ C G+GAK     ++C  C G G V +  
Sbjct: 119 DDLRLDLKLDFREAVFGGEKEIRISHLENCEVCSGSGAKPGTRPRTCSTCSGSGQVRRVT 178

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPFG  +QVSTC  C G G +I D C  C G G  Q  + +K+ IP GV NG  ++I  
Sbjct: 179 RTPFGSFTQVSTCPTCNGTGMVIEDKCDACDGKGANQVTKKLKITIPAGVDNGTRLRISS 238

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKD 344
           EG+  +R   +GDL+V L V+E +   RDG+N+ S+I + Y +AILG  +EV+TV+G  +
Sbjct: 239 EGDAGQRGGPSGDLYVYLFVNEDEEFQRDGINILSEIKISYLQAILGCRLEVDTVDGPVE 298

Query: 345 LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 403
           L IP+G QP   +KL+  GVP + NP  RGDH+  V + IP  ++  ER L+E++A +K
Sbjct: 299 LIIPAGTQPNTVMKLENRGVPRLGNPVSRGDHMLNVLIDIPNKVTPEERELLEKLAKIK 357

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (taxid: 63737)

>sp|Q8YUA5|DNAJ_NOSS1 Chaperone protein DnaJ OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=dnaJ PE=3 SV=1

 Score =  291 bits (744), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 164/363 (45%), Positives = 223/363 (61%), Gaps = 12/363 (3%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A  +EIK +YR+LARKYHPD+NK PGAEE+FKEI+ AYEVLS+ E R+ 
Sbjct: 4   DYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRAR 63

Query: 105 YDRFGEAGITGE---YDGLSNTSQGVDPFE-LYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           YDRFG  G++G    +  +S+     D FE ++S F GG  G        GG        
Sbjct: 64  YDRFGPEGVSGAGVGFQDMSDMGGFADIFESIFSGFAGGGMGGPTQQRRRGGPAR----- 118

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
              G D+R DL L F E++FGG++ I +S  ETC++C G+GAK     ++C  C G G V
Sbjct: 119 ---GDDLRLDLKLDFREAVFGGEKEIRISHLETCETCSGSGAKPGTRPRTCSTCSGSGQV 175

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
            +  RTPFG  +QVSTC  C G G +I D C  C G G  Q  + +K+ IP GV NG  +
Sbjct: 176 RRVTRTPFGSFTQVSTCPTCNGTGMVIEDKCDTCDGKGTNQVTKKLKITIPAGVDNGTRL 235

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE 340
           +I+ EG+  +R    GDL+V L V+E +   RDG+N+ S+I V Y +AILG  +EV TV+
Sbjct: 236 RIKDEGDAGQRGGPPGDLYVYLFVNEDEEFQRDGINVISEIKVSYLQAILGCRLEVNTVD 295

Query: 341 GMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
           G  +L IP+G QP   +KL+  GVP + NP  RGDHL  V + IP  +   ER L+E++A
Sbjct: 296 GPVELIIPAGTQPNTVMKLENRGVPRLGNPVSRGDHLLTVLIDIPTKVIPEERELLEKLA 355

Query: 401 FLK 403
            +K
Sbjct: 356 KIK 358

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	513
356522869	525	PREDICTED: chaperone protein DnaJ-like [	0.922	0.900	0.632	1e-168
297734356	589	unnamed protein product [Vitis vinifera]	0.961	0.837	0.606	1e-168
255577342	433	chaperone protein DNAj, putative [Ricinu	0.807	0.956	0.672	1e-166
359491526	497	PREDICTED: chaperone protein DnaJ-like [	0.793	0.818	0.669	1e-155
224135637	419	predicted protein [Populus trichocarpa]	0.670	0.821	0.747	1e-144
297830416	518	DNAJ heat shock family protein [Arabidop	0.886	0.878	0.572	1e-139
42564975	517	molecular chaperone Hsp40/DnaJ family pr	0.904	0.897	0.564	1e-138
9294487	438	DnaJ homolog [Arabidopsis thaliana]	0.713	0.835	0.669	1e-134
449439587	481	PREDICTED: chaperone protein DnaJ-like [	0.799	0.852	0.538	1e-125
414865579	705	TPA: hypothetical protein ZEAMMB73_81960	0.857	0.624	0.458	1e-118

>gi|356522869|ref|XP_003530065.1| PREDICTED: chaperone protein DnaJ-like [Glycine max]

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 304/481 (63%), Positives = 377/481 (78%), Gaps = 8/481 (1%)

Query: 24  WNYCSGNNRSHRRGMIRA-AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGA 82
           + + +  NRS R  ++RA AGTDYYSTLNV  NATLQEIK SYRKLARKYHPD+NKSPGA
Sbjct: 46  FRFSTARNRS-RAAVVRAKAGTDYYSTLNVGPNATLQEIKASYRKLARKYHPDMNKSPGA 104

Query: 83  EEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDG 142
           E+KFKEIS+AYEVLSDDEKRS+YDRFGE+G+ G+ +G S  + GVDPF+L+  FFG SDG
Sbjct: 105 EDKFKEISAAYEVLSDDEKRSLYDRFGESGLQGD-NGGSTGAPGVDPFDLFDTFFGRSDG 163

Query: 143 LFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGA 202
           +FG VG+ G  NFNF NK N   DIRYDLHLSFEESIFGGQR IEVSCF+TC+ C GTGA
Sbjct: 164 VFG-VGDEGSFNFNFRNKRNHVHDIRYDLHLSFEESIFGGQREIEVSCFQTCNMCDGTGA 222

Query: 203 KSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQS 262
           KS NCI+ C  C GRGG +KTQRTPFG++SQVSTCSKCGG GKII D CRRC G+G+VQS
Sbjct: 223 KSKNCIKQCTNCGGRGGEMKTQRTPFGMMSQVSTCSKCGGLGKIITDQCRRCDGSGQVQS 282

Query: 263 KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS 322
           K++M+V IPPGV++G TMQI+G+GNFD++R + GDL+V LHVDEKQGI R+GL+L+SKIS
Sbjct: 283 KQTMEVEIPPGVNDGDTMQIQGQGNFDKKRQITGDLYVVLHVDEKQGIWREGLHLYSKIS 342

Query: 323 VDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNV 382
           +D+T+AILG+  +V+TVEG++DL+IPSG+QPGD+VKL  +GVPDIN PSVRGDH FIVNV
Sbjct: 343 IDFTDAILGSVKKVDTVEGLRDLQIPSGIQPGDSVKLSCLGVPDINKPSVRGDHYFIVNV 402

Query: 383 LIPKDISDPERALVEEIAFLKSPGKWHSVSTNSTEAAQRKSAKV--RDWKMHC--QGIKS 438
           LIPKDIS  ER LVE++A L++  K  S+S+N     + K  +   RD K     +GIK+
Sbjct: 403 LIPKDISGTERVLVEQLASLRASSKRDSLSSNDNGIPKGKFNEFIKRDPKGDASRKGIKN 462

Query: 439 VGSWWNSVKCFLGQRQSQERFASVGVELPAPLWSSKPDSFLMASVVTVFMITSIFNTVGK 498
           VGS W S+K FL   QS+ERFAS+ ++    LW S   + +      VF+IT IF ++ K
Sbjct: 463 VGSLWGSIKNFLRGGQSEERFASISMDTKVFLWRSGHQNPVPDYFFVVFIITWIFASIAK 522

Query: 499 T 499
           +
Sbjct: 523 S 523

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734356|emb|CBI15603.3| unnamed protein product [Vitis vinifera]

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 314/518 (60%), Positives = 390/518 (75%), Gaps = 25/518 (4%)

Query: 1   MPVIASPSYVNLKLHLSTSFSF---KWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNAT 57
           +P+  SP   N  L  +T F     KW          R G+IRAA +DYYSTLNV +N+T
Sbjct: 5   LPISKSPLISNSALPFNT-FRLRPPKW---------RRWGVIRAARSDYYSTLNVSRNST 54

Query: 58  LQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY 117
           L+EIK+SYRKLARKYHPD+NKSPGAEEKFKEIS+AYEVLSDDEKRS+YDRFGEAG+ GEY
Sbjct: 55  LKEIKSSYRKLARKYHPDLNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLEGEY 114

Query: 118 DGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEE 177
           D  +  S+GVDPF+ + AFF  S+G FG  GE GG+NFN  +KGN GLD+RYDL LSFEE
Sbjct: 115 DRSNGGSKGVDPFDFFDAFFDESNGPFGRWGEPGGMNFNSRSKGNQGLDVRYDLFLSFEE 174

Query: 178 SIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTC 237
           SIFG Q  IEVSCFE CD+CGGTGAKSS+CI++C  C G+GGV+KTQ+TPFG++SQVSTC
Sbjct: 175 SIFGKQEEIEVSCFEVCDNCGGTGAKSSSCIKTCTNCGGKGGVMKTQKTPFGIMSQVSTC 234

Query: 238 SKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGD 297
           SKCGGDGKII  HC+ CGG+G+VQSK+S++V+IPPGVS+GATMQ+RG+GNFD++R +AGD
Sbjct: 235 SKCGGDGKIITSHCQSCGGHGKVQSKQSIEVIIPPGVSDGATMQVRGKGNFDKKRGMAGD 294

Query: 298 LFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 357
           L++ LHV+EK GI RDGLNL+SK++VDYTEAILGT  +VETVEG++DL+IPSG QPGD+V
Sbjct: 295 LYLVLHVNEKHGIWRDGLNLYSKVNVDYTEAILGTVKKVETVEGLRDLQIPSGTQPGDSV 354

Query: 358 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSPGKWHSVSTNSTE 417
           KL  MGVPDIN PS RGDH F+VNVLIPKDISD ER LVE++A +++      VS+    
Sbjct: 355 KLSYMGVPDINRPSRRGDHNFVVNVLIPKDISDTERILVEKLASMRTTCNDQPVSSE--- 411

Query: 418 AAQRKSAKVRDWKMHCQGIKS--VGSWWNSVKCFLGQRQSQERFASVGVELPAPLW-SSK 474
                    +D K H    +S    S W S+K FL +  S+  FASV V+    L   S+
Sbjct: 412 ------GPAKDQKHHASPKRSEHAPSMWKSIKNFLWRNPSRTSFASVSVDTSTLLQRCSR 465

Query: 475 PDSFLMASVVTVFMITSIFNTVGKTDKWTSVRQRNQRR 512
           PDS LM S++TVF+IT IF  +GK++      +R + R
Sbjct: 466 PDSSLMISLLTVFIITCIFTLMGKSNTANYCLKREKER 503

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577342|ref|XP_002529551.1| chaperone protein DNAj, putative [Ricinus communis] gi|223530963|gb|EEF32820.1| chaperone protein DNAj, putative [Ricinus communis]

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 291/433 (67%), Positives = 346/433 (79%), Gaps = 19/433 (4%)

Query: 1   MPVIASPSYVNLK---------------LHLSTSFSFKWNYCSGNNRSHR--RGMIRAAG 43
           MP I  P Y NLK                H   S  F  ++   N +  R    +IRAA 
Sbjct: 1   MPAIQIPCYANLKSTFKPSSIPKSSISFCHGKVSLQFSSSFFRKNGKDRRCCNCVIRAAA 60

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           TD+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK PGAEEKFKEIS+AYEVLSDDEKRS
Sbjct: 61  TDHYSTLNVDRNATLQEIKSSYRKLARKYHPDLNKGPGAEEKFKEISAAYEVLSDDEKRS 120

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNF 163
           +YDRFGEAG+ GEYDG S+ SQG+DPF++Y+AFFG SDG FGG+GEAGGI FN  N G  
Sbjct: 121 LYDRFGEAGLQGEYDG-SSGSQGMDPFDIYNAFFGDSDGFFGGMGEAGGIKFNMRNTGK- 178

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
            LDIRY+L++SFEESIFGGQ+ IE SCFETCD CGGTGAKSS+ I+SC  C GRGGV+KT
Sbjct: 179 DLDIRYNLNVSFEESIFGGQQEIEFSCFETCDKCGGTGAKSSSSIKSCADCGGRGGVMKT 238

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
           QRTPFG++SQVSTCSKC GDGK+I DHC++CGGNG V +KRS+K+VIPPG+S+GA M+I+
Sbjct: 239 QRTPFGMMSQVSTCSKCNGDGKLITDHCQKCGGNGNVSTKRSIKIVIPPGISDGALMRIQ 298

Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMK 343
           GEGNFD++R +AGDL++ LH++EK GI RDGLNL+SKISVDYT AILGT ++V+TV+G+K
Sbjct: 299 GEGNFDKKRGIAGDLYITLHINEKHGIWRDGLNLYSKISVDYTRAILGTVIKVKTVDGLK 358

Query: 344 DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK 403
           DL+IPSG+Q G+TVKL  MGVPD+N P VRGDH FIVNVLIPKDISD ERALVEE+A L 
Sbjct: 359 DLQIPSGIQNGETVKLSWMGVPDVNKPFVRGDHHFIVNVLIPKDISDKERALVEELASLA 418

Query: 404 SPGKWHSVSTNST 416
           S  K H    NS+
Sbjct: 419 SYRKHHEAPINSS 431

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491526|ref|XP_002279102.2| PREDICTED: chaperone protein DnaJ-like [Vitis vinifera]

 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/420 (66%), Positives = 342/420 (81%), Gaps = 13/420 (3%)

Query: 1   MPVIASPSYVNLKLHLSTSFSF---KWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNAT 57
           +P+  SP   N  L  +T F     KW          R G+IRAA +DYYSTLNV +N+T
Sbjct: 5   LPISKSPLISNSALPFNT-FRLRPPKW---------RRWGVIRAARSDYYSTLNVSRNST 54

Query: 58  LQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY 117
           L+EIK+SYRKLARKYHPD+NKSPGAEEKFKEIS+AYEVLSDDEKRS+YDRFGEAG+ GEY
Sbjct: 55  LKEIKSSYRKLARKYHPDLNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLEGEY 114

Query: 118 DGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEE 177
           D  +  S+GVDPF+ + AFF  S+G FG  GE GG+NFN  +KGN GLD+RYDL LSFEE
Sbjct: 115 DRSNGGSKGVDPFDFFDAFFDESNGPFGRWGEPGGMNFNSRSKGNQGLDVRYDLFLSFEE 174

Query: 178 SIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTC 237
           SIFG Q  IEVSCFE CD+CGGTGAKSS+CI++C  C G+GGV+KTQ+TPFG++SQVSTC
Sbjct: 175 SIFGKQEEIEVSCFEVCDNCGGTGAKSSSCIKTCTNCGGKGGVMKTQKTPFGIMSQVSTC 234

Query: 238 SKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGD 297
           SKCGGDGKII  HC+ CGG+G+VQSK+S++V+IPPGVS+GATMQ+RG+GNFD++R +AGD
Sbjct: 235 SKCGGDGKIITSHCQSCGGHGKVQSKQSIEVIIPPGVSDGATMQVRGKGNFDKKRGMAGD 294

Query: 298 LFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV 357
           L++ LHV+EK GI RDGLNL+SK++VDYTEAILGT  +VETVEG++DL+IPSG QPGD+V
Sbjct: 295 LYLVLHVNEKHGIWRDGLNLYSKVNVDYTEAILGTVKKVETVEGLRDLQIPSGTQPGDSV 354

Query: 358 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSPGKWHSVSTNSTE 417
           KL  MGVPDIN PS RGDH F+VNVLIPKDISD ER LVE++A +++      VS+  TE
Sbjct: 355 KLSYMGVPDINRPSRRGDHNFVVNVLIPKDISDTERILVEKLASMRTTCNDQPVSSEGTE 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135637|ref|XP_002322123.1| predicted protein [Populus trichocarpa] gi|222869119|gb|EEF06250.1| predicted protein [Populus trichocarpa]

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/344 (74%), Positives = 308/344 (89%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYYSTLNV +NATLQEIK+SYRKLARKYHPD+NK  GAE+KFKEIS+AYEVLSDDEKRS+
Sbjct: 74  DYYSTLNVSRNATLQEIKSSYRKLARKYHPDMNKGAGAEDKFKEISAAYEVLSDDEKRSL 133

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDRFGEAG+ GE+DG  + SQ VDPFE+Y+ FFGGSDG FGG G  G +NFNF N GN  
Sbjct: 134 YDRFGEAGLQGEFDGSGSGSQEVDPFEIYNTFFGGSDGFFGGRGGDGVLNFNFRNMGNQD 193

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
           LDIRYDL+LS EES+FGGQR IEVS FETCDSC GTGAKSS+CI+SC  C GRGGV+KTQ
Sbjct: 194 LDIRYDLYLSLEESVFGGQREIEVSFFETCDSCSGTGAKSSSCIKSCADCGGRGGVVKTQ 253

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPFG++SQVSTC+KC G+G++I DHCR+CGGNG+++SKRSMKVV P GV++GATM+I+G
Sbjct: 254 RTPFGMMSQVSTCAKCSGEGEVITDHCRKCGGNGKIRSKRSMKVVFPAGVNDGATMRIQG 313

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKD 344
           EG+F+++R +AGDLF++LHV+EKQGI R+GLNL+SKI+VDYT+AILGT ++VETVEG+KD
Sbjct: 314 EGSFNKKRGIAGDLFISLHVNEKQGIWRNGLNLYSKINVDYTQAILGTVLKVETVEGLKD 373

Query: 345 LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDI 388
           L+IPSG+QPGD VKL ++GVPDIN PSVRGDH FIVN+LIPKDI
Sbjct: 374 LQIPSGIQPGDVVKLLRLGVPDINKPSVRGDHHFIVNILIPKDI 417

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830416|ref|XP_002883090.1| DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] gi|297328930|gb|EFH59349.1| DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/466 (57%), Positives = 343/466 (73%), Gaps = 11/466 (2%)

Query: 34  HRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
            RR +I AAG D+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK+PGAE+KFK+IS+AY
Sbjct: 52  RRRVIIMAAGKDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFKQISAAY 111

Query: 94  EVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGI 153
           EVLSD+EKRSVYDRFGEAG+  +++G  +TS GVDPF+LYSAFFGGSDG FG +GE+GG+
Sbjct: 112 EVLSDEEKRSVYDRFGEAGLERDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGEMGESGGM 171

Query: 154 NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKA 213
            F+F NK +  LDIR DL LSFEE++FG +R IEVS  ETCD CGGTGAKSSN I+ C +
Sbjct: 172 GFDFMNKRSLDLDIRCDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNAIKQCSS 231

Query: 214 CWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
           C G+G V+ +QRTPFG++SQVSTCSKCGG+GKII D CR+C GNG ++S++ M VV+PPG
Sbjct: 232 CDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKIITDKCRKCIGNGRLRSRKKMDVVVPPG 291

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTS 333
           VS+ ATM+I+GEGN D+R   AGDLF+ L VDEK+GI R+GLNL+S I++D+T+AILG +
Sbjct: 292 VSDRATMRIQGEGNVDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTDAILGVT 351

Query: 334 MEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPER 393
            +VETVEG  DLRIP G QPGDTVKL + GVPD + PS+RGDH F+V V IPK +S+ ER
Sbjct: 352 TKVETVEGTMDLRIPPGTQPGDTVKLPRKGVPDTDRPSIRGDHCFVVKVSIPKKLSERER 411

Query: 394 ALVEEIAFLKSPGKWHSVSTNSTEAAQRKSAKVRDWKMHCQGIKSVGSWWNSVKCFLGQR 453
            LVEE  F        S   N T        +  +     +  K   S W+ +K F+   
Sbjct: 412 KLVEE--FSSLRRSSSSTGPNET--------RQEEHSFGSEPRKEPPSLWHKMKNFIRPE 461

Query: 454 QSQERFASVGVELPAPLWSSK-PDSFLMASVVTVFMITSIFNTVGK 498
            S+ +F ++ +    PL   K  ++ ++ SV+ + +ITS    V K
Sbjct: 462 DSRTKFGTMSLNPSLPLRGMKVSETSIVISVLALCVITSAVALVQK 507

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42564975|ref|NP_188410.2| molecular chaperone Hsp40/DnaJ family protein [Arabidopsis thaliana] gi|115646890|gb|ABJ17154.1| At3g17830 [Arabidopsis thaliana] gi|332642491|gb|AEE76012.1| molecular chaperone Hsp40/DnaJ family protein [Arabidopsis thaliana]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/478 (56%), Positives = 354/478 (74%), Gaps = 14/478 (2%)

Query: 34  HRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
            RR +  AAGTD+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK+PGAE+KFK+IS+AY
Sbjct: 52  RRRVITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFKQISAAY 111

Query: 94  EVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGI 153
           EVLSD+EKRS YDRFGEAG+ G+++G  +TS GVDPF+LYSAFFGGSDG FGG+GE+GG+
Sbjct: 112 EVLSDEEKRSAYDRFGEAGLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGMGESGGM 171

Query: 154 NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKA 213
            F+F NK +  LDIRYDL LSFEE++FG +R IEVS  ETCD CGGTGAKSSN I+ C +
Sbjct: 172 GFDFMNKRSLDLDIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNSIKQCSS 231

Query: 214 CWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
           C G+G V+ +QRTPFG++SQVSTCSKCGG+GK I D CR+C GNG +++++ M VV+PPG
Sbjct: 232 CDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKMDVVVPPG 291

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTS 333
           VS+ ATM+I+GEGN D+R   AGDLF+ L VDEK+GI R+GLNL+S I++D+T+AILG +
Sbjct: 292 VSDRATMRIQGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTDAILGAT 351

Query: 334 MEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPER 393
            +VETVEG  DLRIP G QPGDTVKL + GVPD + PS+RGDH F+V + IPK +S+ ER
Sbjct: 352 TKVETVEGSMDLRIPPGTQPGDTVKLPRKGVPDTDRPSIRGDHCFVVKISIPKKLSERER 411

Query: 394 ALVEEIAFLKSPGKWHSVSTNSTEAAQRKSAKVRDWKMHCQGIKSVGSWWNSVKCFLGQR 453
            LVEE + L+      S ST  TE  Q + +   + +          S W+ +K F+   
Sbjct: 412 KLVEEFSSLRR----SSSSTGPTETRQEEQSFGSEPRKE-------PSLWHKMKNFIRPE 460

Query: 454 QSQERFASVGVELPAPLWSSK-PDSFLMASVVTVFMITSIFNTVGKTDKWTSVRQRNQ 510
            S+ +F ++ +    PL   K  ++ +  SV+ + +ITS    V K  K   ++Q+ +
Sbjct: 461 DSRTKFGTMSLNPSLPLRRMKVSETSIAFSVLALCVITSAVALVQK--KGNRLKQKKE 516

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9294487|dbj|BAB02706.1| DnaJ homolog [Arabidopsis thaliana]

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/366 (66%), Positives = 305/366 (83%)

Query: 34  HRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
            RR +  AAGTD+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK+PGAE+KFK+IS+AY
Sbjct: 52  RRRVITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFKQISAAY 111

Query: 94  EVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGI 153
           EVLSD+EKRS YDRFGEAG+ G+++G  +TS GVDPF+LYSAFFGGSDG FGG+GE+GG+
Sbjct: 112 EVLSDEEKRSAYDRFGEAGLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGMGESGGM 171

Query: 154 NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKA 213
            F+F NK +  LDIRYDL LSFEE++FG +R IEVS  ETCD CGGTGAKSSN I+ C +
Sbjct: 172 GFDFMNKRSLDLDIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNSIKQCSS 231

Query: 214 CWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
           C G+G V+ +QRTPFG++SQVSTCSKCGG+GK I D CR+C GNG +++++ M VV+PPG
Sbjct: 232 CDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKMDVVVPPG 291

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTS 333
           VS+ ATM+I+GEGN D+R   AGDLF+ L VDEK+GI R+GLNL+S I++D+T+AILG +
Sbjct: 292 VSDRATMRIQGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTDAILGAT 351

Query: 334 MEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPER 393
            +VETVEG  DLRIP G QPGDTVKL + GVPD + PS+RGDH F+V + IPK +S+ ER
Sbjct: 352 TKVETVEGSMDLRIPPGTQPGDTVKLPRKGVPDTDRPSIRGDHCFVVKISIPKKLSERER 411

Query: 394 ALVEEI 399
            LVEE 
Sbjct: 412 KLVEEF 417

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439587|ref|XP_004137567.1| PREDICTED: chaperone protein DnaJ-like [Cucumis sativus]

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/425 (53%), Positives = 305/425 (71%), Gaps = 15/425 (3%)

Query: 93  YEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGG 152
           + VLSDDEKRS+YD+  EAG+ G+Y  +S  S+GVDPF+++ AFFGGSDGLF      GG
Sbjct: 61  FTVLSDDEKRSLYDQLSEAGVHGDYGVMSRDSRGVDPFDIFDAFFGGSDGLFRESDGIGG 120

Query: 153 INFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCK 212
           IN N  ++    LDI Y LHLSFEES+FGG++ I+ S FETC++C GTGAKS++CI+ C 
Sbjct: 121 INLNQRSEKIQSLDIHYALHLSFEESVFGGEKTIQFSFFETCENCDGTGAKSNSCIKLCA 180

Query: 213 ACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPP 272
            C GRGGV+KTQ+TPFG++SQVS CS+CGGDGK I + CR CGG G++QS + M +VIPP
Sbjct: 181 NCHGRGGVVKTQKTPFGMMSQVSICSECGGDGKKITNLCRSCGGGGQLQSIKKMSLVIPP 240

Query: 273 GVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGT 332
           GVS+GATM+I+ EG+ D +R + GDL++ LH+ EK GI RDG++L+S IS+DYTEAILGT
Sbjct: 241 GVSDGATMKIQREGSSDMKRGMTGDLYIMLHIGEKHGIWRDGIHLYSNISIDYTEAILGT 300

Query: 333 SMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPE 392
           +++VETVEG+KDL+IP+GVQPGD V+L  MG+PDIN PSVRGDHLFIVNV IPK +SD E
Sbjct: 301 TVKVETVEGLKDLQIPAGVQPGDRVRLSCMGIPDINKPSVRGDHLFIVNVQIPKRMSDSE 360

Query: 393 RALVEEIAFLKSPGKWHSVSTNSTEAAQRKSAKVRDWKMHC--QGIKSVGSWWNSVKCFL 450
           R  ++E+A LK+  K   V T+             +   H   Q IK   S W+S+K F+
Sbjct: 361 RTKIKELALLKASTKNDEVYTHGMPLGTFDKHTDENQGNHASSQAIKRHRSLWSSIKYFI 420

Query: 451 GQRQSQERFASVGVELPAP-------LWSSKPDSFLMASVVTVFMITSIFNTVGKTDKWT 503
            +RQ +E FAS+G+E+  P       L SS  DS +M     V ++TS+F  +G+   WT
Sbjct: 421 RKRQPREGFASIGIEISKPSCWRPLKLHSSYTDSLIM-----VVIVTSVF-LMGRNYFWT 474

Query: 504 SVRQR 508
            +R++
Sbjct: 475 LLRRK 479

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414865579|tpg|DAA44136.1| TPA: hypothetical protein ZEAMMB73_819602 [Zea mays]

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/497 (45%), Positives = 315/497 (63%), Gaps = 57/497 (11%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+TLN+R+++TLQEIK++YR LARKYHPD+NKSP AEEKFKEIS+AYEVLSD +KRS+
Sbjct: 85  DYYATLNIRRDSTLQEIKSAYRILARKYHPDMNKSPEAEEKFKEISAAYEVLSDQDKRSL 144

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDRFGE G++G+Y      + G+DP+EL++AFFG SD LFG    +GG +++   K N  
Sbjct: 145 YDRFGEEGLSGDYRNGDIGTHGIDPYELFNAFFGSSDKLFGDSMGSGGFHYSAEAKDNRA 204

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
           L+I Y+L LSFEESI GG+R I V   ETC +C GTGAK SN I  C  C G+G ++KTQ
Sbjct: 205 LNISYNLLLSFEESILGGKREINVFRHETCGTCHGTGAKCSNDITECTRCRGQGRLMKTQ 264

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPFG++SQ+S+C  C G GK+I +HC  C G+G VQ +R +KV IP G+ +G+T++I G
Sbjct: 265 RTPFGIVSQISSCLNCEGSGKVITEHCTECYGSGRVQIERIIKVDIPGGIDDGSTIRISG 324

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKD 344
            GN D++R  +GDL++ + V++KQGIHRDGLNL+S  SVDYT+ ILGT+++VET+EG+KD
Sbjct: 325 GGNVDKQRGASGDLYIFVRVNKKQGIHRDGLNLYSDASVDYTDVILGTTVKVETIEGLKD 384

Query: 345 LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPK------------------ 386
           L IP G QPG+ +K  Q+GVPDI  P+VRGDH F++ V+I +                  
Sbjct: 385 LHIPPGTQPGENLKFSQLGVPDIKKPNVRGDHYFMIKVVITEVGDGTNTKFWKDKWLYGW 444

Query: 387 ----DISDP-------------------------ERALVEEIAFLKSPGKWHSVSTNSTE 417
               ++ D                          ER LVEE+A LK        + N + 
Sbjct: 445 QLQPEVEDKHVFSIAPNGIYSTKIAYEGFFLGGQERLLVEELAALKK-------AQNISV 497

Query: 418 AAQRKSAKVRDWKMHCQGIKSVGSWWNSVKCFLGQRQSQERFASVGVELPAPLWSS-KPD 476
               K    R+   H    +   S+W  V  F    +  +RFAS+ V+   P W+S +  
Sbjct: 498 PEPTKIENFRERNHHPSAKRR--SFWGRVWNFFRDDKGDKRFASISVQPIIPGWNSCRGT 555

Query: 477 SFLMASVVTVFMITSIF 493
              +  ++  F++T+IF
Sbjct: 556 DTAVPLLLKGFLMTAIF 572

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	513
TAIR|locus:2088585	517	AT3G17830 [Arabidopsis thalian	0.912	0.905	0.530	3.2e-129
TAIR|locus:2016234	500	AT1G80030 [Arabidopsis thalian	0.842	0.864	0.434	6.8e-95
TAIR|locus:2140035	447	AT4G39960 [Arabidopsis thalian	0.715	0.821	0.426	1.6e-77
TAIR|locus:2041258	442	AT2G22360 [Arabidopsis thalian	0.701	0.814	0.430	1.1e-76
TIGR_CMR|CHY_0416	381	CHY_0416 "chaperone protein dn	0.680	0.916	0.379	1e-59
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.676	0.935	0.345	1.7e-59
TIGR_CMR|GSU_0034	373	GSU_0034 "chaperone protein dn	0.448	0.616	0.344	2e-57
UNIPROTKB|P95830	378	dnaJ "Chaperone protein DnaJ"	0.682	0.925	0.341	9.6e-57
UNIPROTKB|Q47XI7	378	dnaJ "Chaperone protein DnaJ"	0.467	0.634	0.321	8.7e-53
TIGR_CMR|CPS_3820	378	CPS_3820 "chaperone protein Dn	0.467	0.634	0.321	8.7e-53

TAIR|locus:2088585 AT3G17830 [Arabidopsis thaliana (taxid:3702)]

 Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
 Identities = 257/484 (53%), Positives = 335/484 (69%)

Query:    28 SGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFK 87
             SG  R  RR +  AAGTD+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK+PGAE+KFK
Sbjct:    48 SGGYR--RRVITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFK 105

Query:    88 EISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXX 147
             +IS+AYEVLSD+EKRS YDRFGEAG+ G+++G  +TS GVDPF+LYSA            
Sbjct:   106 QISAAYEVLSDEEKRSAYDRFGEAGLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGM 165

Query:   148 XEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNC 207
              E+              LDIRYDL LSFEE++FG +R IEVS  ETCD CGGTGAKSSN 
Sbjct:   166 GESGGMGFDFMNKRSLDLDIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNS 225

Query:   208 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMK 267
             I+ C +C G+G V+ +QRTPFG++SQVSTCSKCGG+GK I D CR+C GNG +++++ M 
Sbjct:   226 IKQCSSCDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKMD 285

Query:   268 VVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTE 327
             VV+PPGVS+ ATM+I+GEGN D+R   AGDLF+ L VDEK+GI R+GLNL+S I++D+T+
Sbjct:   286 VVVPPGVSDRATMRIQGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTD 345

Query:   328 AILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKD 387
             AILG + +VETVEG  DLRIP G QPGDTVKL + GVPD + PS+RGDH F+V + IPK 
Sbjct:   346 AILGATTKVETVEGSMDLRIPPGTQPGDTVKLPRKGVPDTDRPSIRGDHCFVVKISIPKK 405

Query:   388 ISDPERALVEEIAFLKSPGKWHSVSTNSTEAAQRKSAKVRDWKMHCQGIKSVGSWWNSVK 447
             +S+ ER LVEE + L+      S ST  TE  Q + +   + +          S W+ +K
Sbjct:   406 LSERERKLVEEFSSLRRS----SSSTGPTETRQEEQSFGSEPRKE-------PSLWHKMK 454

Query:   448 CFLGQRQSQERFASVGVELPAPLWSSKPDSFLMA-SVVTVFMITSIFNTVGKTDKWTSVR 506
              F+    S+ +F ++ +    PL   K     +A SV+ + +ITS    V K  K   ++
Sbjct:   455 NFIRPEDSRTKFGTMSLNPSLPLRRMKVSETSIAFSVLALCVITSAVALVQK--KGNRLK 512

Query:   507 QRNQ 510
             Q+ +
Sbjct:   513 QKKE 516

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2016234 AT1G80030 [Arabidopsis thaliana (taxid:3702)]

 Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
 Identities = 194/446 (43%), Positives = 277/446 (62%)

Query:    14 LHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYH 73
             L LS+S S    Y    NR  R  ++ A   DYY+TL V ++A  +EIK +YR+LAR+YH
Sbjct:    47 LSLSSSSSSSTPY---RNRRGRSLVVFATSGDYYATLGVSKSANNKEIKAAYRRLARQYH 103

Query:    74 PDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELY 133
             PD+NK PGA EKFKEIS+AYEVLSD++KR++YD++GEAG+     G S      +PF+L+
Sbjct:   104 PDVNKEPGATEKFKEISAAYEVLSDEQKRALYDQYGEAGVKSTVGGASGPYTS-NPFDLF 162

Query:   134 SAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFET 193
                            +A               D+RYD+ L   E+IFG ++  +++  ET
Sbjct:   163 ETFFGASMGGFPGMDQADFGRTRRSRVTKGE-DLRYDITLELSEAIFGSEKEFDLTHLET 221

Query:   194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRR 253
             C++C GTGAK+ + ++ C  C GRG V++T++TPFG+ SQVS C  CGGDG++I ++CR+
Sbjct:   222 CEACAGTGAKAGSKMRICSTCGGRGQVMRTEQTPFGMFSQVSICPNCGGDGEVISENCRK 281

Query:   254 CGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRD 313
             C G G V+ K+S+KV IPPGVS G+ +++ GEG+   R    GDL+V L V++ +GI RD
Sbjct:   282 CSGEGRVRIKKSIKVKIPPGVSAGSILRVAGEGDSGPRGGPPGDLYVYLDVEDVRGIERD 341

Query:   314 GLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVR 373
             G+NL S +S+ Y +AILG  ++V+TVEG  +L+IP G QPGD + L + GVP +N PS+R
Sbjct:   342 GINLLSTLSISYLDAILGAVVKVKTVEGDTELQIPPGTQPGDVLVLAKKGVPKLNRPSIR 401

Query:   374 GDHLFIVNVLIPKDISDPERALVEEIAFLKSPG--------KWHSVSTNSTEAAQRKSAK 425
             GDHLF V V +P  IS  ER L+EE+A LK           K    ST ST  +  ++ K
Sbjct:   402 GDHLFTVKVSVPNQISAGERELLEELASLKDTSSNRSRTRAKPQQPSTLSTAPSGSENKK 461

Query:   426 VRDWKMHCQGIKSVGSWWNSVKCFLG 451
               + K   +  +     WN++K F G
Sbjct:   462 -DEVKEENEEPEQENYLWNNIKEFAG 486

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

TAIR|locus:2140035 AT4G39960 [Arabidopsis thaliana (taxid:3702)]

 Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
 Identities = 160/375 (42%), Positives = 225/375 (60%)

Query:    28 SGNNRSHR--RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEK 85
             S N  S R  R  +RA  TD+YS L V +NAT  EIK++YRKLAR YHPD+NK  GAE+K
Sbjct:    67 SPNTHSRRGARFTVRA-DTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNKDAGAEDK 125

Query:    86 FKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXX 145
             FKEIS+AYE+LSDDEKRS+YDR+GEAG+ G   G+       +PF+L+ +          
Sbjct:   126 FKEISNAYEILSDDEKRSLYDRYGEAGVKGA--GMGGMGDYSNPFDLFESLFEGMGGMGG 183

Query:   146 XXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSS 205
                                 D  Y L L+F+E++FG ++ IE+S  E+C +C G+GAK+ 
Sbjct:   184 MGGGMGSRGSRSRAIDGE--DEYYSLILNFKEAVFGIEKEIEISRLESCGTCNGSGAKAG 241

Query:   206 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRS 265
                  CK C G+G V+ + RTP G+  QV TCS C G G+I    C  C G+G V+  + 
Sbjct:   242 TKPTKCKTCGGQGQVVASTRTPLGVFQQVMTCSPCNGTGEIS-KPCGACSGDGRVRRTKR 300

Query:   266 MKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDY 325
             + + +P GV +G+ +++RGEGN  +R    GDLF  + V     + RD  N+     + Y
Sbjct:   301 ISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFAVIEVIPDPVLKRDDTNILYTCKISY 360

Query:   326 TEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIP 385
              +AILGT+++V TV+G  DL++P+G QP  T+ + + GVP +N   +RGD L  V V IP
Sbjct:   361 VDAILGTTLKVPTVDGEVDLKVPAGTQPSTTLVMAKKGVPVLNKSKMRGDQLVRVQVEIP 420

Query:   386 KDISDPERALVEEIA 400
             K +S  E+ LVEE+A
Sbjct:   421 KRLSKEEKMLVEELA 435

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TAIR|locus:2041258 AT2G22360 [Arabidopsis thaliana (taxid:3702)]

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 162/376 (43%), Positives = 225/376 (59%)

Query:    28 SGNNRSHRRGM---IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEE 84
             S N    RRG    +RA   DYYS L V +NAT  EIK++YRKLAR YHPD+NK PGAEE
Sbjct:    67 SRNMHPPRRGSRFTVRA-DADYYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDPGAEE 125

Query:    85 KFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXX 144
             KFKEIS+AYEVLSDDEK+S+YDR+GEAG+ G   G  N     +PF+L+ +         
Sbjct:   126 KFKEISNAYEVLSDDEKKSLYDRYGEAGLKGAA-GFGNGDFS-NPFDLFDSLFEGFGGGM 183

Query:   145 XXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKS 204
                  +               D  Y L L+F+E++FG ++ IE+S  E+C +C G+GAK 
Sbjct:   184 GRGSRSRAVDGQ---------DEYYTLILNFKEAVFGMEKEIEISRLESCGTCEGSGAKP 234

Query:   205 SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKR 264
                   C  C G+G V+   RTP G+  QV TCS C G G+I    C  C G+G V+  +
Sbjct:   235 GTKPTKCTTCGGQGQVVSAARTPLGVFQQVMTCSSCNGTGEISTP-CGTCSGDGRVRKTK 293

Query:   265 SMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVD 324
              + + +P GV +G+ +++RGEGN  +R    GDLFV + V     + RD  N+     + 
Sbjct:   294 RISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFVVIEVIPDPILKRDDTNILYTCKIS 353

Query:   325 YTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLI 384
             Y +AILGT+++V TV+G  DL++P+G QP  T+ + + GVP +N  ++RGD L  V V I
Sbjct:   354 YIDAILGTTLKVPTVDGTVDLKVPAGTQPSTTLVMAKKGVPVLNKSNMRGDQLVRVQVEI 413

Query:   385 PKDISDPERALVEEIA 400
             PK +S  E+ L+EE+A
Sbjct:   414 PKRLSKEEKKLIEELA 429

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TIGR_CMR|CHY_0416 CHY_0416 "chaperone protein dnaJ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 136/358 (37%), Positives = 196/358 (54%)

Query:    45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRS 103
             DYY  L V +NAT +EIK +YRKLARKYHPD+NK  P A EKFKEI+ AYEVLSD EKR+
Sbjct:     4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRA 63

Query:   104 VYDRFGEAGITGEYDGLSNTSQGVD-PFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXX 161
              YD+FG AG+ G + G      G    FE ++S                           
Sbjct:    64 RYDQFGHAGVDGNFAGQGGFGGGAGINFEDIFSGFGGFGDLFDMVFGSGRKARQGPVPGD 123

Query:   162 XXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
                 DI   L L+ EE++FGG++ + V+  ETC  C G GA+    I +C  C GRG + 
Sbjct:   124 ----DIEAVLELTLEEAVFGGEKELRVTRTETCGHCHGNGAEPGTPIITCPTCQGRGQIH 179

Query:   222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
             +  +T FG + +   CS C G+GKI    CR CGG+G V+  RS+ V IPPG+ +G  ++
Sbjct:   180 QEVKTLFGRMVRSQVCSTCRGEGKIPKTPCRECGGSGLVRKTRSITVKIPPGIDHGHRLR 239

Query:   282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG 341
             I G G   R     GDL+V + +   +   R+ ++L  +  + + +A LG  +E+ T++G
Sbjct:   240 IAGGGEAGRFGGPPGDLYVYIKIKPHKLFKREDIHLKLEKEISFVQAALGAKVEIPTIDG 299

Query:   342 MKD-LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEE 398
               + L IP G Q G    ++  GVP +N  S RG+    V V+ P  +++ ++ L+ E
Sbjct:   300 GTEILEIPEGTQTGTVFTIKGKGVPVVNG-SGRGNLYVTVKVVTPTKLTERQKQLLRE 356

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 123/356 (34%), Positives = 190/356 (53%)

Query:    45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
             DYY  L + + A+  EIK +YR+LA+KYHPD++K   A EKFKE+  AYEVLSDD+KR+ 
Sbjct:     5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query:   105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXX 164
             YD+FG AG    + G          F                  +               
Sbjct:    65 YDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPRQGA------- 117

Query:   165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
              D++Y + L FEE+IFG +  +E+   + CD+C G+GAK     ++CK C G G V   Q
Sbjct:   118 -DLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQ 176

Query:   225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
              TPFG I     CS C G G++I + C  C G+G+V+ ++ + V IP G+ NG  +++ G
Sbjct:   177 NTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSGKVRKRKKINVKIPAGIDNGQQIRVSG 236

Query:   285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKD 344
             +G        AGDL+V +HV   +   R+G ++  ++ + + +  LG  +EV TV G   
Sbjct:   237 KGEAGVNGGPAGDLYVVVHVRSHEFFEREGDHIICEMPLTFAQMALGAEVEVPTVHGKVK 296

Query:   345 LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
             L+IP+G Q G   +L+  G P++     +GD   +V V++P  ++  ++ L+ E A
Sbjct:   297 LKIPAGTQTGTEFRLKGKGAPNVRGYG-QGDQYVVVRVVVPTKLTSHQKDLLREFA 351

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|GSU_0034 GSU_0034 "chaperone protein dnaJ" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 395 (144.1 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
 Identities = 81/235 (34%), Positives = 131/235 (55%)

Query:   166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
             D++Y++ LSFEE+ FG ++ I+V   + C  CGG+GAK     + C  C G G V   Q 
Sbjct:   121 DLQYNMELSFEEAAFGAEKEIQVPYGKRCGDCGGSGAKPGTEPKVCPTCRGAGQVRFQQ- 179

Query:   226 TPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGE 285
                G  S   TC+ C G+G+++ + C  C G+G ++  +++ V +P GV  G  +++ GE
Sbjct:   180 ---GFFSVSKTCNHCNGEGRVVENPCTSCRGSGMIRDTKTLSVKVPAGVETGTRLKLSGE 236

Query:   286 GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDL 345
             G    +    GDL+VA+ V E     R+  ++  +I V + +A LG  +EV T++G   +
Sbjct:   237 GGQGIKGGGNGDLYVAIAVREHPIFTREDNDVLCEIPVSFVQAALGCEIEVPTLDGKVSM 296

Query:   346 RIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
             +IP G Q G   +L+  GVP +     RGD L I+ V  P +++  +R L+EE A
Sbjct:   297 KIPEGTQSGRIFRLRGKGVPQLQGYG-RGDQLVIIKVETPSNLNKRQRELLEEFA 350

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|P95830 dnaJ "Chaperone protein DnaJ" [Streptococcus pneumoniae TIGR4 (taxid:170187)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 122/357 (34%), Positives = 188/357 (52%)

Query:    44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
             T++Y  L V +NA+  EIK +YRKL++KYHPDINK PGAE+K+KE+  AYE LSDD+KR+
Sbjct:     4 TEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRA 63

Query:   104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXX 163
              YD++G AG  G + G      G   F    A                            
Sbjct:    64 AYDQYGAAGANGGFGGAG----GFGGFN--GAGGFGGFEDIFSSFFGGGGSSRNPNAPRQ 117

Query:   164 XLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
               D++Y ++L+FEE+IFG ++ ++      C +C G+GAK      +C  C G G +   
Sbjct:   118 GDDLQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVD 177

Query:   224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
              +TP G++ +  TC  C G GK I   C  C G G  +   S+ V IP GV  G  +++ 
Sbjct:   178 TQTPLGMMRRQVTCDVCHGRGKEIKYPCTTCHGTGHEKQAHSVHVKIPAGVETGQQIRLA 237

Query:   284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMK 343
             G+G         GDL+V + V+      R+G  +F  +++++ +A LG ++++ TV G  
Sbjct:   238 GQGEAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDIPTVHGDV 297

Query:   344 DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
             +L IP G Q G   +L+  G P +   +V GD    VNV+ P  ++D ++  ++E A
Sbjct:   298 ELVIPEGTQTGKKFRLRSKGAPSLRGGAV-GDQYVTVNVVTPTGLNDRQKVALKEFA 353

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q47XI7 dnaJ "Chaperone protein DnaJ" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 365 (133.5 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 79/246 (32%), Positives = 130/246 (52%)

Query:   166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
             D+RY++ LS E+++ G    I+V  + +C+ C G+GAK     ++C  C G G V   Q 
Sbjct:   119 DLRYNVDLSLEDAVKGKSLEIKVPTYVSCEPCDGSGAKKGTSAKTCSTCHGHGQVQMRQ- 177

Query:   226 TPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGE 285
                GL +   TC  C G GK+I D C  C G G V+  +++ V IP GV  G  +++ GE
Sbjct:   178 ---GLFAVQQTCPTCSGKGKVIADKCTSCRGQGRVEKTKTLSVKIPAGVDTGDRIRLSGE 234

Query:   286 GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDL 345
             G      + AGDL+V ++V + +   RD  +L+ ++ + +  A LG  +EV T+ G   L
Sbjct:   235 GEAGEHGAPAGDLYVQVNVRDHEIFVRDENHLYCEVPISFVTAALGGDIEVPTLGGKVKL 294

Query:   346 RIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAF-LKS 404
             ++P   Q G   +L+  GV  + + S  GD +  V +  P ++S  +  L+ ++   + S
Sbjct:   295 KVPKETQTGKMFRLRGKGVKSVRS-STTGDLMCKVVIETPVNLSGDQADLLRQLEEKMAS 353

Query:   405 PGKWHS 410
               K HS
Sbjct:   354 SSKKHS 359

GO:0006457 "protein folding" evidence=ISS

TIGR_CMR|CPS_3820 CPS_3820 "chaperone protein DnaJ" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 365 (133.5 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 79/246 (32%), Positives = 130/246 (52%)

Query:   166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
             D+RY++ LS E+++ G    I+V  + +C+ C G+GAK     ++C  C G G V   Q 
Sbjct:   119 DLRYNVDLSLEDAVKGKSLEIKVPTYVSCEPCDGSGAKKGTSAKTCSTCHGHGQVQMRQ- 177

Query:   226 TPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGE 285
                GL +   TC  C G GK+I D C  C G G V+  +++ V IP GV  G  +++ GE
Sbjct:   178 ---GLFAVQQTCPTCSGKGKVIADKCTSCRGQGRVEKTKTLSVKIPAGVDTGDRIRLSGE 234

Query:   286 GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDL 345
             G      + AGDL+V ++V + +   RD  +L+ ++ + +  A LG  +EV T+ G   L
Sbjct:   235 GEAGEHGAPAGDLYVQVNVRDHEIFVRDENHLYCEVPISFVTAALGGDIEVPTLGGKVKL 294

Query:   346 RIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAF-LKS 404
             ++P   Q G   +L+  GV  + + S  GD +  V +  P ++S  +  L+ ++   + S
Sbjct:   295 KVPKETQTGKMFRLRGKGVKSVRS-STTGDLMCKVVIETPVNLSGDQADLLRQLEEKMAS 353

Query:   405 PGKWHS 410
               K HS
Sbjct:   354 SSKKHS 359

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00017877001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (386 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00033682001	SubName- Full=Chromosome chr8 scaffold_68, whole genome shotgun sequence;; Essential component [...] (313 aa)	•		•				•		0.685
	GSVIVG00015306001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence;; Essential component [...] (298 aa)	•		•				•		0.675
	GSVIVG00005738001	SubName- Full=Chromosome chr3 scaffold_157, whole genome shotgun sequence; (626 aa)	•		•				•		0.534
	GSVIVG00022013001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (667 aa)	•		•						0.533
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)	•		•						0.523
	GSVIVG00037232001	SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (658 aa)	•		•						0.492
	GSVIVG00006687001	SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (667 aa)	•		•						0.491
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.490
	GSVIVG00022731001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (655 aa)	•		•						0.488
	GSVIVG00027261001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (298 aa)	•		•				•		0.486

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	513
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-136
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-130
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-111
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	3e-99
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	2e-94
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	2e-94
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	3e-90
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	9e-89
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	2e-88
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	6e-88
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	2e-85
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	6e-85
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	5e-82
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	3e-81
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	1e-79
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	1e-79
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	1e-78
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	3e-78
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	2e-76
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	1e-71
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	1e-69
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	2e-69
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	8e-69
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	4e-67
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	8e-66
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	1e-60
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	4e-57
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	1e-54
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	1e-53
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	8e-40
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	3e-36
pfam00226	63	pfam00226, DnaJ, DnaJ domain	2e-30
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	8e-26
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	5e-24
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	8e-24
cd10719	65	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H	3e-21
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	1e-20
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	4e-20
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	7e-20
pfam00684	65	pfam00684, DnaJ_CXXCXGXG, DnaJ central domain	4e-18
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	2e-10
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	2e-08
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	2e-08
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	1e-06
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	3e-05
COG1107	715	COG1107, COG1107, Archaea-specific RecJ-like exonu	1e-04
PRK01356	166	PRK01356, hscB, co-chaperone HscB; Provisional	5e-04
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	6e-04
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	9e-04
COG1107	715	COG1107, COG1107, Archaea-specific RecJ-like exonu	0.002
TIGR00714	155	TIGR00714, hscB, Fe-S protein assembly co-chaperon	0.002
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	0.003

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  398 bits (1024), Expect = e-136
 Identities = 154/357 (43%), Positives = 215/357 (60%), Gaps = 7/357 (1%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A+ +EIK +YRKLA+KYHPD NK   AEEKFKEI+ AYEVLSD EKR+ 
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQ 60

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGV-GEAGGINFNFGNKGNF 163
           YD+FG AG  G   G      G + F+    FFG    +FG   G  GG      +    
Sbjct: 61  YDQFGHAGFNG---GGGGGGGGFNGFD--IGFFGDFGDIFGDFFGGGGGSGRRRRSGPRR 115

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G D+RYDL L+FEE++FG ++ IE+   E+C++C GTGAK     ++C  C G G V + 
Sbjct: 116 GEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQ 175

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
           Q TPFG   Q  TC  CGG+GKII + C  C G G V+ ++++ V IP GV  G  +++ 
Sbjct: 176 QGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVS 235

Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMK 343
           G+GN        GDL+V + V   +   RDG +L+ ++ + +T+AILG  +EV T++G  
Sbjct: 236 GKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDV 295

Query: 344 DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
            L+IP+G Q G   +L+  GVP +     RGD L  V V  PK++S  ++ L+EE+A
Sbjct: 296 KLKIPAGTQSGTVFRLKGKGVPRLRGNG-RGDLLVTVKVETPKNLSKEQKELLEELA 351

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  382 bits (984), Expect = e-130
 Identities = 167/362 (46%), Positives = 223/362 (61%), Gaps = 11/362 (3%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A   E+K +YR+LARKYHPD+NK PGAE++FKEI+ AYEVLSD E R+ 
Sbjct: 4   DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRAR 63

Query: 105 YDRFGEAGITGE--YDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
           YD+FGEAG++G   +  + +     D FE    FF G    FGG G  GG     G +  
Sbjct: 64  YDQFGEAGVSGAAGFPDMGDMGGFADIFE---TFFSG----FGGAGGQGGRRRRRGPQR- 115

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
            G D+RYDL L F E+IFGG++ I +   ETC++C G+GAK      +C  C G G V +
Sbjct: 116 -GDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRR 174

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
             RTPFG  +QVS C  C G G++I D C  CGG G  Q  + +K+ IP GV  G  +++
Sbjct: 175 ATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRV 234

Query: 283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM 342
            GEG+   R    GDL+V L V       RDG+N+ S+I + Y +AILG ++EV+TV+G 
Sbjct: 235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP 294

Query: 343 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 402
            +L IP+G QP   + L+  GVP + NP  RGDHL  V V IP  ISD ER L+E++A +
Sbjct: 295 VELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKI 354

Query: 403 KS 404
           K 
Sbjct: 355 KG 356

Length = 374

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  334 bits (860), Expect = e-111
 Identities = 153/373 (41%), Positives = 212/373 (56%), Gaps = 16/373 (4%)

Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDE 100
           A  DYY  L V ++A+ +EIK +YRKLA+KYHPD N     AEEKFKEI+ AYEVLSD E
Sbjct: 2   AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPE 61

Query: 101 KRSVYDRFGEAGI-TGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGN 159
           KR+ YD+FG AG   G + G      G D  +++  FFGG  G  G             N
Sbjct: 62  KRAAYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFGG--GGGGRRR---------PN 110

Query: 160 KGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGG 219
           +   G D+RY+L ++ EE++FG ++ I V+   TC +C G+GAK     ++C  C G G 
Sbjct: 111 RPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQ 170

Query: 220 VLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT 279
           V   QRT F   S   TC  C G GKII D C +C G G V+ K+S+ V IP GV +G  
Sbjct: 171 VRTVQRTGF--FSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDR 228

Query: 280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETV 339
           +++ GEG        AGDL+V +HV       RDG +L+ ++ + +TEA LG  +EV T+
Sbjct: 229 IRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTL 288

Query: 340 EGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEI 399
           +G   L+IP+G Q G+  +L+  G+P + +   RGD    V V  PK++SD ++ L+EE 
Sbjct: 289 DGRVKLKIPAGTQTGEVFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEF 347

Query: 400 AFLKSPGKWHSVS 412
           A     G   S  
Sbjct: 348 AKSLGEGPEQSPG 360

Length = 371

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  304 bits (780), Expect = 3e-99
 Identities = 152/380 (40%), Positives = 213/380 (56%), Gaps = 30/380 (7%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLS 97
           AA  DYY  L V +NAT +EIK +YR+LA+KYHPD+N  PG   AE+KFKEI+ AYE+LS
Sbjct: 2   AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLN--PGDKEAEQKFKEINEAYEILS 59

Query: 98  DDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGG-SDGLFGGVGEAGGINFN 156
           D +KR+ YD+FG A       G     QG         F GG  D  FGG G+     F 
Sbjct: 60  DPQKRAQYDQFGHAAFDPGGFGQGGFGQG--------GFGGGGFDFDFGGFGDIFEDIFG 111

Query: 157 --FGN----------KGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKS 204
             FG           KG    DIRYDL L+FEE+ FG ++ IEV  FE CD C G+GAK 
Sbjct: 112 DFFGTGRRRAETGPQKGA---DIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKP 168

Query: 205 SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKR 264
            +   +C  C G G V   Q TPFG I  + TC +C G+GKII D C +CGG G ++ +R
Sbjct: 169 GSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRR 228

Query: 265 SMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVD 324
            +KV IP G+ +G  + +RGEG    +    GDL++ + V       R+G N++ ++ + 
Sbjct: 229 KIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPIT 288

Query: 325 YTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLI 384
           +T+A LG  +E+ T++G     IP G Q G   +L+  G+P +     RGD +  V + +
Sbjct: 289 FTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYIEV 347

Query: 385 PKDISDPERALVEEIAFLKS 404
           PK +++ ++ L+ E   L  
Sbjct: 348 PKKLTEKQKELLREFEKLSG 367

Length = 386

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  291 bits (747), Expect = 2e-94
 Identities = 142/370 (38%), Positives = 199/370 (53%), Gaps = 22/370 (5%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V +NA+  EIK +YRKLA KYHPD N     AEEKFKEI  AYEVLSD +KR+
Sbjct: 5   DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRA 64

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPF-ELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
            YD++G A    E  G      G   F +++   FG    +FGG    G        +  
Sbjct: 65  AYDQYGHAAF--EQGGGGGGFGGGGGFGDIFGDIFG---DIFGGGRGGG------RQRAR 113

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
            G D+RY++ ++ EE++ G  + I +    TCD+C G+GAK     ++C  C G G V  
Sbjct: 114 RGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRM 173

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
            Q    G  +   TC  C G GKII D C++C G G V+ ++++ V IP GV  G   +I
Sbjct: 174 QQ----GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTG--DRI 227

Query: 283 R--GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE 340
           R  GEG    R   AGDL+V +HV E     RDG +L+ ++ + +T A LG  +EV T++
Sbjct: 228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLD 287

Query: 341 GMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
           G   L+IP G Q G   +L+  GV  + +   RGD    V V  P +++  ++ L+EE  
Sbjct: 288 GRVKLKIPEGTQTGKLFRLRGKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFE 346

Query: 401 FLKSPGKWHS 410
                G+ HS
Sbjct: 347 ESFESGEKHS 356

Length = 371

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  291 bits (746), Expect = 2e-94
 Identities = 129/360 (35%), Positives = 198/360 (55%), Gaps = 6/360 (1%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
              T+YY  L V ++A+  EIK +YRKL++KYHPDINK PGAEEK+KE+  AYE LSD +
Sbjct: 1   MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQ 60

Query: 101 KRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           KR+ YD++G AG  G + G +    G D        FGG + +F      GG   N  N 
Sbjct: 61  KRAAYDQYGAAGANGGFGGGAGGFGGFDGS----GGFGGFEDIFSSFFGGGGARRN-PNA 115

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
              G D++Y ++L FEE+IFG ++ +  +   TC +C G+GAK      +C  C G G +
Sbjct: 116 PRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVI 175

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
               +TP G++ +  TC  C G GK I + C+ C G G  +   ++ V IP GV  G  +
Sbjct: 176 TVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQI 235

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE 340
           +++G+G         GDL+V   V+  +   RDG  ++  + + + +A LG ++EV TV 
Sbjct: 236 RLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVH 295

Query: 341 GMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
           G  +L+IP+G Q G   +L+  G P +      GD    VN++ P  ++D ++  ++  A
Sbjct: 296 GDVELKIPAGTQTGKKFRLRGKGAPKLRGGGN-GDQHVTVNIVTPTKLNDAQKEALKAFA 354

Length = 380

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  280 bits (718), Expect = 3e-90
 Identities = 144/360 (40%), Positives = 210/360 (58%), Gaps = 17/360 (4%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A+  EIK +YRKL++KYHPDINK  GA+EKFKEIS AYEVLSDD+KR+ 
Sbjct: 5   DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQ 64

Query: 105 YDRFGEAGITGEYDGLSNTSQ---GVDPFE-LYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           YD+FG AG    + G         G   FE ++S+FFGG     GG       + N   +
Sbjct: 65  YDQFGHAGPNQGFGGGGFGGGDFGGGFGFEDIFSSFFGG-----GGRRR----DPNAPRQ 115

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
           G    D++Y + L+FEE++FG ++ IE+   ETCD+C G+GAK     ++C  C G G V
Sbjct: 116 GA---DLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQV 172

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
              Q TPFG +    TC  C G G+ I + C  C G G+V+ ++ + V IP GV NG  +
Sbjct: 173 SVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQI 232

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE 340
           ++ GEG        AGDL+V   V   +   RDG +++ ++ + + +A LG  +EV T+ 
Sbjct: 233 RVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLH 292

Query: 341 GMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
           G   L+IP+G Q G   +L+  GVP++     +GD   +V V+ P  ++D ++ L+ E A
Sbjct: 293 GKVKLKIPAGTQTGTQFRLKGKGVPNVRGYG-QGDQYVVVRVVTPTKLTDRQKELLREFA 351

Length = 376

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  276 bits (707), Expect = 9e-89
 Identities = 140/365 (38%), Positives = 209/365 (57%), Gaps = 22/365 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLSDDEK 101
           DYY  L V ++A+ +EIK SYRKLA KYHPD  ++PG   AEE FKE + AYEVLSD +K
Sbjct: 5   DYYEILGVTRDASEEEIKKSYRKLAMKYHPD--RNPGDKEAEELFKEAAEAYEVLSDPKK 62

Query: 102 RSVYDRFGEAGITGEYDGLSNTS-QGVDPFE-LYSAFFGGSDGLFGGVGEAGGINFNFGN 159
           R +YD++G       ++GLS T   G   F+ ++S+F    +  FG  G   G +     
Sbjct: 63  RGIYDQYG-------HEGLSGTGFSGFSGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVR 115

Query: 160 KGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGG 219
            G    D+RYDL L F E+ FG ++ I +   ETC+ C G+G +      +C  C G G 
Sbjct: 116 AGA---DLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQ 172

Query: 220 VLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT 279
           V ++Q    G  S  +TC +C G GK+I+  C+ C G G V+  ++++V IP GV  G+ 
Sbjct: 173 VTQSQ----GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSR 228

Query: 280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETV 339
           +++RGEG    R    GDL+V L V+  +   RDG ++  K+ + + +A LG  +EV T+
Sbjct: 229 LRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTL 288

Query: 340 EGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEI 399
           EG ++L+IP G QPGD  + +  G+P +     RGD +  V V +P  ++  +  L+ E 
Sbjct: 289 EGERELKIPKGTQPGDIFRFKGKGIPSLRGGG-RGDQIIEVEVKVPTRLTKKQEELLTEF 347

Query: 400 AFLKS 404
           A L+S
Sbjct: 348 ARLES 352

Length = 366

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  275 bits (706), Expect = 2e-88
 Identities = 139/363 (38%), Positives = 199/363 (54%), Gaps = 22/363 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L + ++A++++IK +YRKLA KYHPD NK P AEEKFKEIS AY VLSD EKR+ 
Sbjct: 6   DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQ 65

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG--- 161
           YDRFG AGI  +Y                   F G+D  FGG G+   + F  G +    
Sbjct: 66  YDRFGHAGIDNQYSA--------------EDIFRGAD--FGGFGDIFEMFFGGGGRRGRM 109

Query: 162 --NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGG 219
               G D+RYDL+++ EE+ FG ++ I+V   E C +C GTGAK     + C  C G G 
Sbjct: 110 GPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQ 169

Query: 220 VLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT 279
           V  T+ TP G     +TCS C G G++I   C  C G G+V+  R + V +P G  +G  
Sbjct: 170 VTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLR 229

Query: 280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETV 339
           +++ GEG      + +GDL++ LHV E     R G ++ S+I + +T+A LG  + V T+
Sbjct: 230 LKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTL 289

Query: 340 EGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEI 399
            G   + IP G Q     +L+  G+P ++    +GD L  V V  P  ++  ++ L+ E 
Sbjct: 290 YGKVKMNIPPGTQTHSVFRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREF 348

Query: 400 AFL 402
             L
Sbjct: 349 DEL 351

Length = 377

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  275 bits (704), Expect = 6e-88
 Identities = 135/356 (37%), Positives = 197/356 (55%), Gaps = 27/356 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V +NAT +EIK +YR+LARKYHPD NK+P AEEKFKEI+ AY+VLSD EKR +
Sbjct: 4   DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKL 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGS--------DGLFGGVGEAGGINFN 156
           YD+FG A  +G         Q     E +S F GG+          +FG     G     
Sbjct: 64  YDQFGHAAFSGSG-------QQQQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRAT 116

Query: 157 FGNKGNF-----GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSC 211
              +  +     G DI   + +S EE+  G    +EV  +  C++CGGTG    +  + C
Sbjct: 117 RERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVC 176

Query: 212 KACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIP 271
             C G G +   QR  F  ISQ  TC  CGG+G ++ + C +C G G V  K ++KV IP
Sbjct: 177 PTCGGSGEI--YQRGGFFRISQ--TCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIP 231

Query: 272 PGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILG 331
           PGV NG+ +++ G+G+  R     GDL++ + V       R G NL+  +++   EA+LG
Sbjct: 232 PGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLG 291

Query: 332 TSMEVETVEGMKD-LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPK 386
           T +EV  ++G K+ ++IP G + GD +++   G+P +   S  GD +  V++ +PK
Sbjct: 292 TELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPK 346

Length = 382

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  267 bits (685), Expect = 2e-85
 Identities = 133/372 (35%), Positives = 200/372 (53%), Gaps = 25/372 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN--KSPGAEEKFKEISSAYEVLSDDEKR 102
           DYY  L V +NAT +EIK +Y++L +++HPD +      AE+KFKEI  AYEVLSD +KR
Sbjct: 5   DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKR 64

Query: 103 SVYDRFGEAGITGEYDGLSNTSQGV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG 161
           ++YDRFG  G    Y    +      D F+ +   F     +F         +  FG + 
Sbjct: 65  AMYDRFGYVGEQPPYQETESGGGFFEDIFKDFENIFN--RDIF---------DIFFGERR 113

Query: 162 N---------FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCK 212
                      G DIRY++ ++  + I G +  +E   +ETC  CGGTG +  +   +C 
Sbjct: 114 TQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCP 173

Query: 213 ACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPP 272
            C G G + + +R+ FG+     TC +CGG GKI  ++C  CGG+G ++ +    V IP 
Sbjct: 174 KCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233

Query: 273 GVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGT 332
           GV +G  ++I G GN        GDL+V + V       R G +L   +++DY +AILGT
Sbjct: 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGT 293

Query: 333 SMEVETVEG-MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDP 391
           ++EV   EG    L+IP G QP    +L+  G+P++     RGD +  V+V IPK +S  
Sbjct: 294 TVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSRE 352

Query: 392 ERALVEEIAFLK 403
           ER L++E+A  +
Sbjct: 353 ERKLLKELAKKR 364

Length = 369

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  267 bits (683), Expect = 6e-85
 Identities = 134/362 (37%), Positives = 206/362 (56%), Gaps = 11/362 (3%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
           A   DYY  L V +NA  +EIK +YRKLARKYHPD+++  GAEEKFKEIS AY VLSDDE
Sbjct: 2   AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDE 61

Query: 101 KRSVYDRFGEAGITGEYDGLSNTS--QGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFG 158
           KR  YD+FG AG+    DG S       ++  +++  F  G   +F   G  GG      
Sbjct: 62  KRQRYDQFGHAGM----DGFSQEDIFNNINFEDIFQGFGFGIGNIFDMFGFGGGSRHGPQ 117

Query: 159 NKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRG 218
                G DI  ++ ++ EE+  G ++ I+V   + C  C G+ A+  + +++C  C G G
Sbjct: 118 R----GADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTG 173

Query: 219 GVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA 278
            V + + T  G +  V+TC  C G+GKI+   C  C G G V+  +++ V IP GV  G+
Sbjct: 174 QVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGS 233

Query: 279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVET 338
            +++ GEG    R    GDL+V + V   +   R+G NL+ +  + + +A LG +++V T
Sbjct: 234 RLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPT 293

Query: 339 VEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEE 398
           ++G  +L+IP+G Q G T +L+  G+P +   S +G+    V V++PK +S  ++ L+ E
Sbjct: 294 IDGPVELKIPAGTQSGTTFRLKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLRE 352

Query: 399 IA 400
            A
Sbjct: 353 FA 354

Length = 378

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  259 bits (664), Expect = 5e-82
 Identities = 135/367 (36%), Positives = 205/367 (55%), Gaps = 8/367 (2%)

Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDE 100
           A  DYY  L + + A+  EIK ++RKLA KYHPD NK +  AEEKFKEI+ AY+VLSD +
Sbjct: 2   ASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQ 61

Query: 101 KRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           K++ YD+FG A   G     S    G D  ++   F    D  FGG   +     N   +
Sbjct: 62  KKAQYDQFGTADFNGAGGFGSGGFGGFDFSDM-GGFGDIFDSFFGGGFGSSSRRRNGPQR 120

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
           G    DI Y ++L+FEE++FG ++ I V+  E C++C GTGAK     ++C  C G G +
Sbjct: 121 GA---DIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQI 177

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
              + TP G     +TC KCGG GK+I D C +C G G+V+  R +KV +P GV  G  +
Sbjct: 178 RVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVI 237

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE 340
            +RG+G   +     GDL++ + V   +   R G +++    + + +A LGT ++V TV+
Sbjct: 238 PLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVD 297

Query: 341 GMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
           G     +P+G QPG   +L+  GVP +N+   RG+    V V IPK ++  ++  +    
Sbjct: 298 GEVKYEVPAGTQPGTVFRLKGKGVPRVNSTG-RGNQYVTVIVDIPKKLNSKQKEAL--TM 354

Query: 401 FLKSPGK 407
           F+++ G+
Sbjct: 355 FMEASGE 361

Length = 380

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  257 bits (658), Expect = 3e-81
 Identities = 133/371 (35%), Positives = 185/371 (49%), Gaps = 31/371 (8%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
            DYY  L V +NA+  EIK +YRKLAR+ HPD+N    A+EKFKEIS AYEVLSD EKR 
Sbjct: 3   RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRR 62

Query: 104 VYDRFGE---------AGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGIN 154
           + D  G+          G  G + GL       D FE   AFFGG     G  G      
Sbjct: 63  IVDLGGDPLESAGGGGGGFGGGFGGLG------DVFE---AFFGGGAASRGPRGRV---- 109

Query: 155 FNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKAC 214
                 G+  L +R  L L  EE   G  + + V     CD C G G    +   +C  C
Sbjct: 110 ----RPGSDSL-LRMRLDL--EECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTC 162

Query: 215 WGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGV 274
            GRG V   QR+  G +     C  C G G++I D C  C G+G V+++R + V IP GV
Sbjct: 163 GGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGV 222

Query: 275 SNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSM 334
            +G  +++  +G        AGDL+V +H        RDG +L   +SV   +A LGT++
Sbjct: 223 GDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTV 282

Query: 335 EVETV-EGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPER 393
            VE + +G  ++ IP G QPG  + L+  G+P + +   RGD    V V++P  +   + 
Sbjct: 283 TVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDI 341

Query: 394 ALVEEIAFLKS 404
            L+ E+  L+ 
Sbjct: 342 ELLRELKALRG 352

Length = 378

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  253 bits (649), Expect = 1e-79
 Identities = 142/378 (37%), Positives = 219/378 (57%), Gaps = 25/378 (6%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLSDDE 100
            DYY+ L V + A+ +EIK +YRKLA KYHPD  K+PG   AE++FKE+S AYEVLSD +
Sbjct: 1   MDYYTILGVSKTASPEEIKKAYRKLAVKYHPD--KNPGDAEAEKRFKEVSEAYEVLSDAQ 58

Query: 101 KRSVYDRFGE------AGITGEYDGLSNTSQGVDPFE-LYSAFFGGS----DGLFGGVGE 149
           KR  YDR+G+      AG  G   G+ N    +  F   +   FGG     +GLFGG+GE
Sbjct: 59  KRESYDRYGKDGPFAGAGGFGG-AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGE 117

Query: 150 AGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQ 209
           A G+          G   +  + LSFEE+  G ++ + VS +++CD+C G+GA SS  I+
Sbjct: 118 AFGMRGGPAGARQ-GASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIK 176

Query: 210 SCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVV 269
            C  C G G V++++    G  S  STC +CGG+G++I D C  C G G ++ KRS+ V 
Sbjct: 177 VCDRCKGSGQVVQSR----GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVH 232

Query: 270 IPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAI 329
           IP GV +G  +++ G G+  +  + AGDL+V + V+      R G +L  ++ + + +A 
Sbjct: 233 IPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAA 292

Query: 330 LGTSMEVETV--EGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKD 387
           LG   E+ T+  EG   L IP G+Q G  +K++  G P+++    RGD L  ++V  P++
Sbjct: 293 LGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKG-RGDLLVRISVETPQN 351

Query: 388 ISDPERALVEEIAFLKSP 405
           +S+ ++ L+ + A  +  
Sbjct: 352 LSEEQKELLRQFAATEKA 369

Length = 391

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  253 bits (649), Expect = 1e-79
 Identities = 141/409 (34%), Positives = 215/409 (52%), Gaps = 43/409 (10%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLSDDEK 101
           DYY  L V ++A   EIK +YRKLA KYHPD  K+P    AEE FKE++ AYEVLS+D+K
Sbjct: 4   DYYEVLGVSRSADKDEIKKAYRKLALKYHPD--KNPDNKEAEEHFKEVNEAYEVLSNDDK 61

Query: 102 RSVYDRFGEAGITGEYDGLSNTSQGVDPF--------ELYSAFFGGSDGLFGGVGEAGGI 153
           R  YD+FG AG+     G S  S G   +        +++SAF   +D   GG    GG 
Sbjct: 62  RRRYDQFGHAGV-----GSSAASGGGPGYGGGGGDFNDIFSAF---NDMFGGGARRGGGS 113

Query: 154 NFNFGN------------KGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG 201
            F F +             G  G D++  L L+ EE   G ++ +++     C  C GTG
Sbjct: 114 PFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTG 173

Query: 202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQ 261
           +K+    ++C  C G G V +  +T FG    ++ C  CGG+G+++ D C  C G G  Q
Sbjct: 174 SKTGA-TETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQ 232

Query: 262 SKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI 321
            + ++KV +P GV +G  + +RG+GN   R    GDL V +     +   R+G ++   +
Sbjct: 233 GEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNL 292

Query: 322 SVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVN 381
           +V Y + +LGT +EV T++G   L IP+G QP   +++   G+  +     RGD    VN
Sbjct: 293 AVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSG-RGDQYVRVN 351

Query: 382 VLIPKDISDPERALVEEIAFLKSPGKWHSVSTNSTEAAQRKS--AKVRD 428
           V +PK++S  ++ L++E+   KS      +S N+    + KS   K +D
Sbjct: 352 VFVPKEVSHQDKELLKELK--KSSH----ISPNAHNDKEEKSFFEKAKD 394

Length = 397

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  250 bits (641), Expect = 1e-78
 Identities = 138/365 (37%), Positives = 204/365 (55%), Gaps = 11/365 (3%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLS 97
           A   DYY  L V + AT+ EIK +YRK A +YHPD  K+PG   AEEKFKE + AY+VLS
Sbjct: 2   AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPD--KNPGDKEAEEKFKEAAEAYDVLS 59

Query: 98  DDEKRSVYDRFGEAGITGEYDGLSNTSQGV---DPFELYSAFFGGSDGLFGGVGEAGGIN 154
           D +KRS YD+FG AG+ G   G   + +G+   D F ++   FGG  G FGG G  GG  
Sbjct: 60  DPDKRSRYDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGG-- 117

Query: 155 FNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKAC 214
                +   G D+R  + L+ +E   G ++  +V  +  C  C GTGA+ +N  ++C  C
Sbjct: 118 GGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTC 177

Query: 215 WGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGV 274
            G G V + Q T  G +   STC  C G+GKII   C++CGG G V  +  + V IP GV
Sbjct: 178 KGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGV 237

Query: 275 SNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSM 334
           + G  + + G+GN  +   + GDL V +  +    + RD  +L   + +    A LG ++
Sbjct: 238 AEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAV 297

Query: 335 EVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERA 394
           EV T++G   ++I +G QPG  ++L+  G+P +N     GD L  V+V IP+ +S  E+ 
Sbjct: 298 EVPTIDGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYG-TGDLLVNVSVYIPETLSKEEKQ 356

Query: 395 LVEEI 399
            +E++
Sbjct: 357 TLEKM 361

Length = 386

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  249 bits (637), Expect = 3e-78
 Identities = 131/362 (36%), Positives = 203/362 (56%), Gaps = 26/362 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V +NA++ E+K +YRKLARKYHPD+NK+P AE+KFKE+  AY+ LSD +K++ 
Sbjct: 5   DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAH 64

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFG------ 158
           YD+FG                  DP +    F GG  G FGG  +   + F  G      
Sbjct: 65  YDQFGHT----------------DPNQ---GFGGGGAGDFGGFSDIFDMFFGGGGGRRNP 105

Query: 159 NKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRG 218
           N    G D++Y + L F+E++FG +  IE+   ETC +C G+GAK     ++C  C G G
Sbjct: 106 NAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSG 165

Query: 219 GVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA 278
            +   Q TPFG +     C  C G GKII   C  CGG G+V+ ++ + V +P G+ +G 
Sbjct: 166 QLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQ 225

Query: 279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVET 338
            +++ G+G         GDL+V  +V   +   RDG +++ ++ + + +  LG  +EV T
Sbjct: 226 QLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPT 285

Query: 339 VEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEE 398
           + G   L+IP+G Q G + +L+  GVP+++    +GD    V V+ PK++++ E+ L+ E
Sbjct: 286 LNGKVKLKIPAGTQTGTSFRLRGKGVPNVHGRG-QGDQHVQVRVVTPKNLTEKEKELMRE 344

Query: 399 IA 400
            A
Sbjct: 345 FA 346

Length = 371

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  244 bits (625), Expect = 2e-76
 Identities = 134/359 (37%), Positives = 195/359 (54%), Gaps = 14/359 (3%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V ++A+  EIK +YRKLA +YHPD N  +P AE+KFKE + AYEVL D EKR+
Sbjct: 5   DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRA 64

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNF 163
            YDRFG AG+ G   G    S   D F  +S  FG   G F G G   G       +   
Sbjct: 65  RYDRFGHAGVNG-NGGFGGFSSAEDIFSHFSDIFGDLFG-FSGGGSRRG------PRPQA 116

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G D+RY+L +SF ++  G +  + +    TCD CGG+GA      ++C+ C G G V ++
Sbjct: 117 GSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQS 176

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
           Q    G       C  C G+G++I   C +C G+G VQ  R +KV IP GV  G+ +++R
Sbjct: 177 Q----GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLR 232

Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMK 343
           GEG         GDL+V + V++ +   R G +L     + + +A LG  +EV T++   
Sbjct: 233 GEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPV 292

Query: 344 DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL 402
            L IP G Q G+  +L+  G+P + + S +GD L  V+V+ P  ++  +  L+ E   L
Sbjct: 293 TLDIPKGTQSGEVFRLRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEAL 350

Length = 373

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  232 bits (592), Expect = 1e-71
 Identities = 132/360 (36%), Positives = 197/360 (54%), Gaps = 15/360 (4%)

Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSV 104
           YY  L V ++A  +EIK++YRKLA KYHPD NK +  +EEKFKE + AYE+L D +KR  
Sbjct: 6   YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQA 65

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFG---GVGEAGGINFNFGNKG 161
           YD+FG+AG+     G      G   +  +S  FG    +FG   G G  GG      +  
Sbjct: 66  YDQFGKAGVNAGAGGF-----GQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGP 120

Query: 162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
             G D+RY+L +S E++  G +  IE+   E+C  C G+GA   +   +C  C G G + 
Sbjct: 121 QRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIR 180

Query: 222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
           +TQ    G  S  +TC  C G G +I + C+ CGG G  + +R++ + IPPGV  G+ ++
Sbjct: 181 RTQ----GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLK 236

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG 341
           + GEG         GDL+V  H+ + +   R G +L     +   +AILG  +EV T++G
Sbjct: 237 VSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDG 296

Query: 342 MK-DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
            K  ++IP G + G   +L+  G+P +     +GD   IV + IPK I+  +R L+EE A
Sbjct: 297 KKAKMKIPEGTESGQVFRLKGHGMPYLGAYG-KGDQHVIVKIEIPKKITRRQRELIEEFA 355

Length = 372

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  227 bits (581), Expect = 1e-69
 Identities = 142/368 (38%), Positives = 190/368 (51%), Gaps = 25/368 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V ++AT  EIK +YRKLAR+YHPD NK    AEE+FKEIS AY+VLSD++KR 
Sbjct: 10  DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRK 69

Query: 104 VYDR----FGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFG- 158
            YD     FG  G      G      G   F+L   F GG+ G  GG G  GG+   FG 
Sbjct: 70  EYDEARSLFGNGGFR---PGPGGGGGGGFNFDLGDLFGGGAQG-GGGAGGGGGLGDVFGG 125

Query: 159 --NKGNF------GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQS 210
             N+G        G D+  ++ LSF E+I G    + ++    C +C GTGAK+    + 
Sbjct: 126 LFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRV 185

Query: 211 CKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVI 270
           C  C G G V +      G  S    C  C G G I  D C  C G+G  +S R+M+V I
Sbjct: 186 CPTCSGTGQVSRNS----GGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRI 241

Query: 271 PPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAIL 330
           P GVS+G  +++RG+G    R   AGDL+V +HVD      R G NL   + V + EA L
Sbjct: 242 PAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAAL 301

Query: 331 GTSMEVETVEGMK-DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDIS 389
           G  + V T+ G    +++P G   G  ++++  G         RGD L  V V +PKD+S
Sbjct: 302 GAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAV--RKDGTRGDLLVTVEVAVPKDLS 359

Query: 390 DPERALVE 397
              R  +E
Sbjct: 360 GKAREALE 367

Length = 389

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  226 bits (577), Expect = 2e-69
 Identities = 119/368 (32%), Positives = 197/368 (53%), Gaps = 27/368 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V + A+ QEI+ +YRKLA++YHPD+NKSP A +K  EI+ A +VL D +KR  
Sbjct: 5   DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQ 64

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFN------FG 158
           YD+FG A     +DG S  S            FG  + LF  +G +G  +F       FG
Sbjct: 65  YDQFGHAA----FDGSSGFSSN----------FGDFEDLFSNMGSSGFSSFTNIFSDFFG 110

Query: 159 -NKGNF-----GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCK 212
            NK ++     G  +  D++L+F+E +FG  + IE+     C  C G+GA+S++ I  C 
Sbjct: 111 SNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICN 170

Query: 213 ACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPP 272
            C G G VL  +   F    Q + C+ C G GKII + C+ C G G+   ++ ++V IP 
Sbjct: 171 NCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPK 230

Query: 273 GVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLN-LFSKISVDYTEAILG 331
           G+     +++  +G+      + GDL + +++ E +       N +    ++ Y +AILG
Sbjct: 231 GIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILG 290

Query: 332 TSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDP 391
             + ++T++G    ++P  +   + + +   G+    N   RGD +  VN+++PK++S  
Sbjct: 291 NEIIIKTLDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKK 350

Query: 392 ERALVEEI 399
           E+ L+E+I
Sbjct: 351 EKELIEQI 358

Length = 372

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  224 bits (573), Expect = 8e-69
 Identities = 127/367 (34%), Positives = 199/367 (54%), Gaps = 29/367 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDE 100
           DYY  L V +NA+ ++IK ++R+LA+K+HPD++  PG    AEEKFKEIS AYEVLSD +
Sbjct: 4   DYYKILGVDRNASQEDIKKAFRELAKKWHPDLH--PGNKAEAEEKFKEISEAYEVLSDPQ 61

Query: 101 KRSVYDR-----FGEAGITGEYDGLSNTSQGVDPFELYSAFFGGS--DGLFGGVGEAGGI 153
           KR  YD+     FG  G    +D  ++ S   D  ++++  FGG+     F G G     
Sbjct: 62  KRRQYDQTGTVDFGAGGSNFNWDNFTHFS---DINDIFNQIFGGNFGSDFFSGFG----- 113

Query: 154 NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKA 213
             N  +  N  LDI  +L +S E++ +G ++ I+      C  C GTGAK+   I +C  
Sbjct: 114 --NQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLI-TCPT 170

Query: 214 CWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
           C G G     +   F  +  V+TC  CGG G+I  + C RC G G V     + V IP G
Sbjct: 171 CHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKG 230

Query: 274 VSNGATMQIRGEGN-FDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGT 332
            ++   ++++G+G  +  R    GDL+V L V+    I R   +L+    +++ +A LG 
Sbjct: 231 ATDNLRLRVKGKGQSYGGR---TGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGG 287

Query: 333 SMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPE 392
            +E++      +L+IP G QPG+ +K++  G+P +N     GD L  +NV +PK ++  +
Sbjct: 288 EIEIKLFREKYNLKIPEGTQPGEVLKIKGAGMPHLNGHG-SGDLLVRINVEVPKRLTSKQ 346

Query: 393 RALVEEI 399
           + L+ E 
Sbjct: 347 KELIREF 353

Length = 365

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  220 bits (562), Expect = 4e-67
 Identities = 120/358 (33%), Positives = 181/358 (50%), Gaps = 16/358 (4%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V + A+  EIK++YRKLA KYHPD NK  GA EKF +I+ AY VLSD EKR+ 
Sbjct: 3   DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAH 62

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG-NF 163
           YDRFG A   G   G      G DP +++         LFGG G  GG     G +G   
Sbjct: 63  YDRFGTAPGAGMPGGDPFGGMGFDPMDIFEQ-------LFGGAGFGGG----RGRRGPAR 111

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAK-SSNCIQSCKACWGRGGVLK 222
           G D+  +  ++ E++  G +  +EV     C+ C G+  +      ++C  C G G V  
Sbjct: 112 GDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRA 171

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
             RT FG++     C  C G+G+II D C  C G G      ++KV +P G+  G  +++
Sbjct: 172 QARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRV 231

Query: 283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM 342
            G GN        GDL+V + ++    + R+  +L  +  + + +A LG  + V T++G 
Sbjct: 232 AGMGN--EGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGP 289

Query: 343 KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
           + + +  G Q GD  +L+  G+P +      GD +    + +PK +S   R  +E  A
Sbjct: 290 QVIEVKPGTQHGDLHRLRGQGMPRLQGAGT-GDLIVEYEIAVPKQLSPEAREALEAYA 346

Length = 371

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  217 bits (553), Expect = 8e-66
 Identities = 125/359 (34%), Positives = 198/359 (55%), Gaps = 17/359 (4%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V + A+  ++K +Y KLA++YHPD   +  AE+KFKEI++AY+VL D++KR+ 
Sbjct: 4   DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAA 63

Query: 105 YDRFGEAGITGEYD---GLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG 161
           YDRFG      +     G ++     D  +++  FF  SD  F G    G       +  
Sbjct: 64  YDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFF--SD--FMG----GSRRSRPTSSK 115

Query: 162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
             G D++Y+L ++ EE+  G ++ I  S    CD+C G+G++    + +C AC G G   
Sbjct: 116 VRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVG--- 172

Query: 222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
              R   G  +    C KC G+G+II + C++C G G    +R++ V IP GV NG  ++
Sbjct: 173 -ATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIR 231

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG 341
             GEG    R   +GDL+V + +        DG NL  K+ + +  A LG  +EV  +EG
Sbjct: 232 HTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEG 291

Query: 342 MK-DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEI 399
            K +L IP+G Q GD ++L+  G+  + + ++RGD L  ++V +PK++S  +R L+EE 
Sbjct: 292 GKVNLTIPAGTQNGDQLRLRSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEF 349

Length = 372

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  203 bits (519), Expect = 1e-60
 Identities = 118/365 (32%), Positives = 178/365 (48%), Gaps = 25/365 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           D+Y  L V  +A+ +EIK +YRKLAR+ HPD N   P AEE+FK +S A++VLSD  KR 
Sbjct: 10  DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRK 69

Query: 104 VYDRF-----------GEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGG 152
            YD                   G + G      G + F L   F     G  GG+G+  G
Sbjct: 70  EYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAE-FNLNDLFDAAGRGGGGGIGDLFG 128

Query: 153 INFNFG------NKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSN 206
             FN G      ++   G D+  +  L F E+  G    + ++    C +C G+GA+   
Sbjct: 129 GLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGT 188

Query: 207 CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSM 266
             + C  C G  GV+   +  FG       C+ C G G II D C  C G G     R++
Sbjct: 189 SPKVCPTCNG-SGVISRNQGAFGF---SEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTI 244

Query: 267 KVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYT 326
            V IPPGV +G  +++ G+G    R + +GDL+V +HV   +   RDG +L   + V +T
Sbjct: 245 NVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFT 304

Query: 327 EAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPK 386
           E  LG+++ V T++G   +++P+G   G  ++++  GVP        GD L  V V +P 
Sbjct: 305 ELALGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVP--KRSGGAGDLLVTVKVAVPP 362

Query: 387 DISDP 391
           ++   
Sbjct: 363 NLDGA 367

Length = 392

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  194 bits (493), Expect = 4e-57
 Identities = 110/365 (30%), Positives = 193/365 (52%), Gaps = 26/365 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L + + A+  EIK +YRK+A KYHPD NK +  AE  FKE + AYEVL DD KR+
Sbjct: 4   DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRA 63

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN- 162
            YDRFG               +G   FE +S  F G   +F   G+    +F  GN+G  
Sbjct: 64  QYDRFGHTAF-----------EGGGGFEGFSGGFSGFSDIFEDFGDIFD-SFFTGNRGQD 111

Query: 163 ------FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWG 216
                  G D+ Y + +S E++  G +  I ++    C+SC G  ++       C  C G
Sbjct: 112 KNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNG 171

Query: 217 RGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSN 276
            G V++      G     +TC KC G+GKII + C+ C G G ++ K ++++ IP G+ +
Sbjct: 172 SGRVMQGG----GFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDD 227

Query: 277 GATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
              +++RG+G+ +      GDL++ + +   +   R+G +L++ + + +T+A LG  +++
Sbjct: 228 NQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKI 287

Query: 337 ETVEGMK-DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERAL 395
           +T+   K  ++IP G +  + + ++  G+P ++     G+ + I+ +  PK+++     L
Sbjct: 288 QTIASKKIKIKIPKGTENDEQIIIKNEGMPILHTEKF-GNLILIIKIKTPKNLNSNAIKL 346

Query: 396 VEEIA 400
           +E ++
Sbjct: 347 LENLS 351

Length = 365

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  187 bits (476), Expect = 1e-54
 Identities = 122/356 (34%), Positives = 191/356 (53%), Gaps = 20/356 (5%)

Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-AEEKFKEISSAYEVLSDDEKRSV 104
           YY  L V +++  + IK SYRKLA KYHPD N     AEEKFK I+ AY VLSD++KR++
Sbjct: 5   YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRAL 64

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDR+G+ G+       S+ S   D FE   +FF  + G FG  G           K +  
Sbjct: 65  YDRYGKKGLNQAGASQSDFS---DFFEDLGSFFEDAFG-FGARGSK-------RQKSSIA 113

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D    + LSF+E++FG ++ I+V     C+SC GTGAK    +++CK C G+G V   Q
Sbjct: 114 PDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAK-DKALETCKQCNGQGQVFMRQ 172

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
               G +S   TC  C G GKII   C+ C G   +     +  +IP G+ +   M ++ 
Sbjct: 173 ----GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKN 228

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMK- 343
           +GN +  +   GDL++   V E +   R+G +LF +  V +T   LG +++V +++G + 
Sbjct: 229 KGN-EYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDEL 287

Query: 344 DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEI 399
           +L+IP   +   T   +  GV    + S RG  +  + V+ PK ++  ++ L+E++
Sbjct: 288 ELKIPRNARDRQTFAFRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKL 342

Length = 369

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  186 bits (473), Expect = 1e-53
 Identities = 113/351 (32%), Positives = 169/351 (48%), Gaps = 40/351 (11%)

Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVY 105
            Y  LN+ ++ T  EIK +YRKLA K+HPD     G  EKFKEIS AYEVLSD EKR +Y
Sbjct: 30  LYEVLNLSKDCTTSEIKKAYRKLAIKHHPD---KGGDPEKFKEISRAYEVLSDPEKRKIY 86

Query: 106 DRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGL 165
           D +GE       +GL    Q  D  +L+   FGG         + GG           G 
Sbjct: 87  DEYGE-------EGLEGGEQPADASDLFDLIFGGGR-------KPGG--------KKRGE 124

Query: 166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
           DI   L ++ E+   G  R + ++    C +C G G    +    CK C G+G  ++ Q 
Sbjct: 125 DIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGG-PKDAFVDCKLCNGQG--IRVQI 181

Query: 226 TPFG-LISQV-STCSKCGGDGKII--IDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
              G +I Q  STC+ C G GKII     C+ C G G  ++++ ++V I  GV N   + 
Sbjct: 182 RQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKIT 241

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG 341
             GE + ++   + G++   L+        R+G +LF    +   EA+ G    +  ++G
Sbjct: 242 FHGEAD-EKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDG 300

Query: 342 MKDLRI---PSGV-QPGDTVKLQQMGVPDINNPSVRGDHLFIV-NVLIPKD 387
            K L +   P  V +PGD   +   G+P   +P  +G +L++   V+ P D
Sbjct: 301 RK-LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKG-NLYVTFEVIFPVD 349

Length = 421

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score =  145 bits (367), Expect = 8e-40
 Identities = 106/360 (29%), Positives = 161/360 (44%), Gaps = 76/360 (21%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
            A  DYY+ L V +NA+  EIK +++KLARKYHPD+NKSPGAEEKFKEI+ AY VLSD E
Sbjct: 1   MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPE 60

Query: 101 KRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           KR +YD +G    +  +       QG  P                  G  GG +F+  N 
Sbjct: 61  KRRIYDTYGTTAASAGW-------QGPPP------------------GPPGGGDFSGFNV 95

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
           G+F           F + +FGG+ G     F       G  A+             +G  
Sbjct: 96  GDFS---------DFFQQLFGGRGG--FGGFGDLFGSVGRRAR-------------KGRD 131

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
           L+ +  P  L          GG+  + +                 + V IPPGV  G  +
Sbjct: 132 LEAE-LPLTLEEAYR-----GGEKVVEVA-------------GERLSVRIPPGVREGQVI 172

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE 340
           ++ G+G         GDL++ + +        +G +L++ + V    A++G  + V T++
Sbjct: 173 RLAGKGR------QGGDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLD 226

Query: 341 GMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA 400
           G  ++ IP   Q G  ++L+  G P    P+ RGD    V + IP   +  E  L +++A
Sbjct: 227 GPVEVTIPPRTQAGRKLRLKGKGWP--RGPAGRGDQYAEVRITIPTRPTPEEERLYKQLA 284

Length = 291

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  131 bits (333), Expect = 3e-36
 Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 1/129 (0%)

Query: 260 VQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFS 319
           V+ K+++ V IP GV +G  +++RGEG+        GDL+V + V       RDG +L+ 
Sbjct: 31  VREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYC 90

Query: 320 KISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFI 379
           ++ +  TEA+LG  +EV T+ G   L+IP G QPG  ++L+  G+P +     RGD    
Sbjct: 91  EVPISLTEALLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRL-RGGGRGDLYVE 149

Query: 380 VNVLIPKDI 388
           V V  PK +
Sbjct: 150 VKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  112 bits (282), Expect = 2e-30
 Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGA-EEKFKEISSAYEVLSDDEKRS 103
           DYY  L V ++A+ +EIK +YRKLA KYHPD N    A EEKFKEI+ AYEVLSD EKR+
Sbjct: 1   DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 104 VYD 106
           +YD
Sbjct: 61  IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 99.6 bits (249), Expect = 8e-26
 Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 2/60 (3%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEK 101
           TDYY  L V ++A+L EIK +YRKLA KYHPD N      AEEKFKEI+ AYEVLSD EK
Sbjct: 1   TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score =  101 bits (254), Expect = 5e-24
 Identities = 42/103 (40%), Positives = 65/103 (63%), Gaps = 13/103 (12%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+ + V+    L+ IKT+YR+LARKYHPD++K P AE +FKE++ A+EVLSD+++R+ 
Sbjct: 5   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 64

Query: 105 YD---------RFGEAGITGEYDGLSNTSQGVDPFELYSAFFG 138
           YD         +F         DG S  ++  D  +++S+ FG
Sbjct: 65  YDQLWQHRNDPQFNRQ--FQHGDGQSFNAEDFD--DIFSSIFG 103

Length = 306

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 93.8 bits (234), Expect = 8e-24
 Identities = 36/55 (65%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSD 98
          DYY  L V  +A+ +EIK +YRKLA KYHPD N   P AEEKFKEI+ AYEVLSD
Sbjct: 1  DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40

 Score = 86.9 bits (216), Expect = 3e-21
 Identities = 29/65 (44%), Positives = 36/65 (55%)

Query: 194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRR 253
           C +C G+GAK     ++C  C G G V + Q T FG     +TC  CGG GKII D C +
Sbjct: 1   CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTGFGFFQTQTTCPTCGGTGKIIKDPCPK 60

Query: 254 CGGNG 258
           C G G
Sbjct: 61  CKGKG 65

Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding. Length = 65

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 90.7 bits (224), Expect = 1e-20
 Identities = 58/279 (20%), Positives = 89/279 (31%), Gaps = 64/279 (22%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--AEEKFKEISSAYEVLSDDEKR 102
           DYY  L V  NA+L+EIK +YRKLA KYHPD N      AEEKFKEI+ AYE+LSD E+R
Sbjct: 7   DYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERR 66

Query: 103 SVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
           + YD+ G                                       +      ++     
Sbjct: 67  AEYDKIG--------------------------------------ADNYFPGKSYRESAA 88

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
           F ++    L   +EE      +    +      S G +G           A         
Sbjct: 89  FPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLSGL--------AAALSLFADEAA 140

Query: 223 TQRTPFGLI----SQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA 278
            +           +      +     K  +               +++K  I  G   G 
Sbjct: 141 LRSGSLRRRDLAANLADNFEEALAGVKKAV----------ARLLGKALKSTIKAGALEGK 190

Query: 279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNL 317
            ++++G       R   G   +            +G + 
Sbjct: 191 ALRLKGLL--KSARGALGKARLKELSKRHPPFALEGDDK 227

Length = 237

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 84.1 bits (209), Expect = 4e-20
 Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 1/81 (1%)

Query: 316 NLFSKISVDYTEAILGTSMEVETVEGMK-DLRIPSGVQPGDTVKLQQMGVPDINNPSVRG 374
           +L+  + +   EA+LG ++EV T++G K  ++IP+G QPGD ++++  G+P     + RG
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 375 DHLFIVNVLIPKDISDPERAL 395
           D +  +NV IPK +S  ++ L
Sbjct: 61  DLIVTLNVKIPKKLSSEQKEL 81

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 93.0 bits (230), Expect = 7e-20
 Identities = 37/74 (50%), Positives = 52/74 (70%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L + ++A  QEIK ++RKLA+KYHPD NK+P A   F EI+ A +VLS+ +KR+ 
Sbjct: 3   DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRAN 62

Query: 105 YDRFGEAGITGEYD 118
           YD++G  G+  E D
Sbjct: 63  YDKYGHDGVDREDD 76

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain

 Score = 78.2 bits (193), Expect = 4e-18
 Identities = 33/65 (50%), Positives = 38/65 (58%)

Query: 194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRR 253
           C  C GTGAK     ++C  C G G V+K QRTP G+     TC KCGG GKII D C+ 
Sbjct: 1   CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQRTPGGVFQMQQTCPKCGGTGKIIKDPCKV 60

Query: 254 CGGNG 258
           C G G
Sbjct: 61  CKGKG 65

The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found. Length = 65

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 62.9 bits (152), Expect = 2e-10
 Identities = 29/72 (40%), Positives = 42/72 (58%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           T +Y  L V  NA ++EI   Y KLA  Y+P          KFK+I+ AY++L D +K+ 
Sbjct: 573 TLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKK 632

Query: 104 VYDRFGEAGITG 115
           +Y++FG  GI G
Sbjct: 633 MYNKFGYDGIKG 644

Length = 1136

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 55.6 bits (134), Expect = 2e-08
 Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 3/146 (2%)

Query: 259 EVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLF 318
           E +  +++ V IP GV NG  ++++G+G         GDL++ +H+         G +L 
Sbjct: 153 EQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLE 212

Query: 319 SKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLF 378
             + +   EA LG  + V T++    L IP G Q G  ++++  G   + +    GD   
Sbjct: 213 IVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKG---LVSKKQTGDLYA 269

Query: 379 IVNVLIPKDISDPERALVEEIAFLKS 404
           ++ +++P    +   AL +++A  +S
Sbjct: 270 VLKIVMPPKPDEKTAALWQQLADAQS 295

Length = 306

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 56.5 bits (136), Expect = 2e-08
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 16/93 (17%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGA--------EEKFKEISSAYE 94
           G D Y  L + Q+ + ++IK  YR L+ K+HPD  K+P          EEK+K I+ AY 
Sbjct: 97  GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPD--KAPPMVNELRSEYEEKYKTITKAYG 154

Query: 95  VLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGV 127
           +L+D ++R  Y  +G        D   +TS+G+
Sbjct: 155 LLTDKKRRENYLNYGTP------DSPQHTSEGI 181

Length = 610

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 49.8 bits (120), Expect = 1e-06
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG------- 81
                +++        D Y  L V ++   QEIK +YRKL  ++HPD   + G       
Sbjct: 185 QGGGGYQQAQRGPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMME 244

Query: 82  -AEEKFKEISSAYEVL 96
            A+EK +EI +AYE++
Sbjct: 245 MAKEKAQEIQAAYELI 260

Length = 267

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 45  DYYSTLNV---RQNATLQEIKTSYRKLARKYHPDINKSPGA---EEKFKEISSAYEVLSD 98
           D Y+ L +   R  A   +I  +++K   KYHPD   + G    +E FK I  A EVL D
Sbjct: 44  DLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGD 103

Query: 99  DEKRSVYD 106
            + R  YD
Sbjct: 104 RKLRLQYD 111

Length = 379

>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

 Score = 44.7 bits (106), Expect = 1e-04
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 15/81 (18%)

Query: 192 ETCDSCGGTGAKSSNCI--QSCKACWGRG--------GVLKTQRTPF-GLISQVSTCSKC 240
           + C  CGG G      +  + C  C G G        GV    R       S    C KC
Sbjct: 3   KKCPECGGKGKI---VVGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKC 59

Query: 241 GGDGKI-IIDHCRRCGGNGEV 260
            G G + + D C  CGG G+V
Sbjct: 60  RGKGTVTVYDTCPECGGTGKV 80

Length = 715

>gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional

 Score = 40.6 bits (95), Expect = 5e-04
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 45  DYYSTLNVRQ--NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISS----AYEVLSD 98
           +Y+  L + Q  N  L+ ++  Y  +  KYHPD  K+   +E+   I+S    AY  L D
Sbjct: 3   NYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKD 62

Query: 99  DEKRSVY 105
             KR+ Y
Sbjct: 63  ALKRAEY 69

Length = 166

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 264 RSMKVVIPPGVSNGATMQIRGEGNFDRRRSLA-GDLFVALHVD 305
           R +K+ IP G   G  ++I+G+G    +     GDL V L+V 
Sbjct: 27  RKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRGDLIVTLNVK 69

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 40.0 bits (94), Expect = 9e-04
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 8/69 (11%)

Query: 45  DYYSTLNVRQNAT--LQEIKTSYRKLARKYHPDINKSPGAEEK------FKEISSAYEVL 96
           D +    + +     L  +K  YR+L R YHPD        E+        E++ AY+ L
Sbjct: 2   DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTL 61

Query: 97  SDDEKRSVY 105
            D   R+ Y
Sbjct: 62  KDPLLRAEY 70

Length = 174

>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

 Score = 40.5 bits (95), Expect = 0.002
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 233 QVSTCSKCGGDGKIIIDH--CRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFD 289
            +  C +CGG GKI++    C  C G G            P GV+N +   +    +F+
Sbjct: 1   MIKKCPECGGKGKIVVGEEECPVCHGTGFSDD------FDPKGVANLSRETVDLFASFE 53

Length = 715

>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 59  QEIKTSYRKLARKYHPDINKS----PGAEEKFKEISSAYEVLSDDEKRSVY 105
             ++  YR+L  +YHPD +        A ++   ++ AY  L D  +R+ Y
Sbjct: 6   SRLRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock [Protein fate, Protein folding and stabilization]. Length = 155

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 38.2 bits (90), Expect = 0.003
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 316 NLFSKISVDYTEAILGTSMEVE------TVEGMKDL--RIPSGVQPGDTVKLQQMGVPDI 367
           +L   + +   EA  G   E++       V   K L  +IP+GV  G  ++L+  G    
Sbjct: 2   DLRYDLELTLEEAYFGKEKEIKIPRKVTRVREKKTLTVKIPAGVDDGQRLRLRGEGDAGP 61

Query: 368 NNPSVRGDHLFIVNV 382
           N     GD   ++ V
Sbjct: 62  NG-GPPGDLYVVIRV 75

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	513
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.9
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.84
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.77
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.76
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.75
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.74
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.72
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.69
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.68
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.66
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.66
PHA03102	153	Small T antigen; Reviewed	99.65
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.59
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.56
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.56
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.54
PRK10767	371	chaperone protein DnaJ; Provisional	99.48
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.46
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.46
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.41
PRK14282	369	chaperone protein DnaJ; Provisional	99.38
PRK05014	171	hscB co-chaperone HscB; Provisional	99.36
PRK01356	166	hscB co-chaperone HscB; Provisional	99.34
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.34
PRK14290	365	chaperone protein DnaJ; Provisional	99.34
PRK14298	377	chaperone protein DnaJ; Provisional	99.32
PRK14294	366	chaperone protein DnaJ; Provisional	99.31
PRK00294	173	hscB co-chaperone HscB; Provisional	99.31
PRK14285	365	chaperone protein DnaJ; Provisional	99.3
PRK03578	176	hscB co-chaperone HscB; Provisional	99.29
PTZ00100	116	DnaJ chaperone protein; Provisional	99.25
PRK14301	373	chaperone protein DnaJ; Provisional	99.25
PRK14300	372	chaperone protein DnaJ; Provisional	99.25
PRK14284	391	chaperone protein DnaJ; Provisional	99.24
PRK14287	371	chaperone protein DnaJ; Provisional	99.24
PRK14278	378	chaperone protein DnaJ; Provisional	99.22
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.22
PRK14276	380	chaperone protein DnaJ; Provisional	99.21
PRK14288	369	chaperone protein DnaJ; Provisional	99.2
PRK14281	397	chaperone protein DnaJ; Provisional	99.19
PRK14279	392	chaperone protein DnaJ; Provisional	99.19
PRK14286	372	chaperone protein DnaJ; Provisional	99.18
PRK14280	376	chaperone protein DnaJ; Provisional	99.18
PHA02624	647	large T antigen; Provisional	99.17
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.16
PRK14293	374	chaperone protein DnaJ; Provisional	99.16
PRK14297	380	chaperone protein DnaJ; Provisional	99.16
PRK14277	386	chaperone protein DnaJ; Provisional	99.14
PRK14296	372	chaperone protein DnaJ; Provisional	99.14
PRK14289	386	chaperone protein DnaJ; Provisional	99.13
PRK14295	389	chaperone protein DnaJ; Provisional	99.12
PRK14283	378	chaperone protein DnaJ; Provisional	99.12
PRK14292	371	chaperone protein DnaJ; Provisional	99.11
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.08
PRK14291	382	chaperone protein DnaJ; Provisional	99.05
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.03
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.82
PRK14299	291	chaperone protein DnaJ; Provisional	98.78
PRK01773	173	hscB co-chaperone HscB; Provisional	98.76
PLN03165	111	chaperone protein dnaJ-related; Provisional	98.7
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.62
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.59
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.55
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.47
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.33
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.31
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.19
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	98.06
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.75
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	97.63
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	97.35
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	97.27
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	96.94
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	96.45
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.35
KOG2813	406	consensus Predicted molecular chaperone, contains	95.63
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	95.59
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.44
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	94.33
KOG2813	406	consensus Predicted molecular chaperone, contains	93.89
KOG0431	453	consensus Auxilin-like protein and related protein	93.86
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	90.4
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	84.99
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	81.7

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.6e-97  Score=761.21  Aligned_cols=348  Identities=43%  Similarity=0.732  Sum_probs=319.8

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCC
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL  120 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~  120 (513)
                      +.+|||+||||+++||++|||+|||+||+|||||+|+ +++|+++|++|++||||||||+||++||+||++++++++.++
T Consensus         2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg   81 (371)
T COG0484           2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGG   81 (371)
T ss_pred             CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCC
Confidence            5689999999999999999999999999999999999 789999999999999999999999999999999997333222


Q ss_pred             -CCCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCC
Q 010330          121 -SNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (513)
Q Consensus       121 -~~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~G  199 (513)
                       ++++++.++.|||++|||+.  +++         ...++.+.+|.|+++.|+|||+|||+|+++++.+++...|++|+|
T Consensus        82 ~g~~~fgg~~~DIF~~~FgGg--~~~---------~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~G  150 (371)
T COG0484          82 FGFGGFGGDFGDIFEDFFGGG--GGG---------RRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHG  150 (371)
T ss_pred             CCcCCCCCCHHHHHHHhhcCC--Ccc---------cCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCC
Confidence             12222226889999999632  111         112234679999999999999999999999999999999999999


Q ss_pred             CCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCE
Q 010330          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT  279 (513)
Q Consensus       200 tG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~  279 (513)
                      +|+++++.+.+|++|+|+|++...+++  |.|++.++|+.|+|+|++|.++|.+|+|.|++.+.++++|+||+|+.+|++
T Consensus       151 sGak~gt~~~tC~tC~G~G~v~~~~~~--g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~  228 (371)
T COG0484         151 SGAKPGTDPKTCPTCNGSGQVRTVQRT--GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDR  228 (371)
T ss_pred             CCCCCCCCCCcCCCCCCcCeEEEEEee--eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCE
Confidence            999999999999999999999988887  889999999999999999999999999999999999999999999999999


Q ss_pred             EEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEE
Q 010330          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKL  359 (513)
Q Consensus       280 Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l  359 (513)
                      |+++|+|+++.+++++|||||.|.|++|+.|.|+|+|||++++|++.+|+||++|+||||||.++|+||+|+|+|++++|
T Consensus       229 ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~~~rl  308 (371)
T COG0484         229 IRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEVFRL  308 (371)
T ss_pred             EEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCcEEEE
Confidence            99999999998899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          360 QQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       360 ~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      +|+|||..++ ..+|||||+++|++|++|+.+|++||++|++..
T Consensus       309 ~gkG~p~~~~-~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~~  351 (371)
T COG0484         309 RGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL  351 (371)
T ss_pred             cCCCccccCC-CCcCCEEEEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence            9999998665 467999999999999999999999999999866

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-84  Score=680.72  Aligned_cols=347  Identities=31%  Similarity=0.612  Sum_probs=307.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCcccc-CCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD-GLS  121 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~-~~~  121 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|++++|+++|++|++||+||+||+||+.||+||++++.++.+ +++
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~~   82 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCcC
Confidence            5799999999999999999999999999999999998889999999999999999999999999999987753211 001


Q ss_pred             CCC----------CCC-CcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeee
Q 010330          122 NTS----------QGV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSC  190 (513)
Q Consensus       122 ~~~----------~g~-d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r  190 (513)
                      .++          .++ ++.|+|++|||+.    +  +        ....+.++.|+.+.|.|||+|+|+|+++++.+.+
T Consensus        83 ~~~~~~~~~~~~~~g~~~f~d~f~~~fggg----~--~--------~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~  148 (372)
T PRK14296         83 FGDFEDLFSNMGSSGFSSFTNIFSDFFGSN----K--S--------DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDL  148 (372)
T ss_pred             CCccccccccccccccccchhhhhhhcCCC----c--c--------CCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEee
Confidence            000          011 2235666666421    0  0        0122457899999999999999999999999999


Q ss_pred             eeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEc
Q 010330          191 FETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVI  270 (513)
Q Consensus       191 ~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~I  270 (513)
                      .+.|++|+|+|........+|+.|+|+|.++..++.++.++++.++|+.|+|+|+++.+.|..|+|.|++.+.++++|.|
T Consensus       149 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~I  228 (372)
T PRK14296        149 LTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNI  228 (372)
T ss_pred             eeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEE
Confidence            99999999999998888999999999999998888777666677899999999999999999999999999999999999


Q ss_pred             CCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccc-cccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCC
Q 010330          271 PPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRD-GLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPS  349 (513)
Q Consensus       271 P~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~-G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~  349 (513)
                      |+|+++|++|+|+|+|++..+++.+|||||+|+|++|+.|+|+ |+|||++++|||.|||||+++.|+||||++.|+||+
T Consensus       229 p~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~  308 (372)
T PRK14296        229 PKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPK  308 (372)
T ss_pred             CCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECC
Confidence            9999999999999999987677889999999999999999995 899999999999999999999999999998999999


Q ss_pred             CCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          350 GVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       350 g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      ++|||++++|+|+|||....++.+|||||+|+|.||+.||++|+++|++|++..
T Consensus       309 ~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~~  362 (372)
T PRK14296        309 SINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQT  362 (372)
T ss_pred             ccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999999999999966555678999999999999999999999999999864

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-82  Score=665.71  Aligned_cols=346  Identities=37%  Similarity=0.752  Sum_probs=312.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~~  122 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|++++|+++|++|++||++|+||++|++||+||++++.+++++++ 
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~-   81 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGG-   81 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCC-
Confidence            4799999999999999999999999999999999988889999999999999999999999999999988764321111 


Q ss_pred             CCCCC-CcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCC
Q 010330          123 TSQGV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG  201 (513)
Q Consensus       123 ~~~g~-d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG  201 (513)
                       +.++ ++.|+|++|||+. +  +    ..     ....+.++.|+.++|.|||+|+|+|+++++.+.+.+.|+.|+|+|
T Consensus        82 -~~~f~~~~d~f~~~fgg~-~--~----~~-----~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G  148 (371)
T PRK14287         82 -AGDFGGFSDIFDMFFGGG-G--G----RR-----NPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSG  148 (371)
T ss_pred             -CccccchHHHHHhhhccc-c--C----CC-----CCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcc
Confidence             1111 3458899998641 0  0    00     011235789999999999999999999999999999999999999


Q ss_pred             cccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEE
Q 010330          202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ  281 (513)
Q Consensus       202 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Ir  281 (513)
                      ........+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++...|..|+|.+++.+.++++|.||+|+.+|++|+
T Consensus       149 ~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~  228 (371)
T PRK14287        149 AKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLR  228 (371)
T ss_pred             cCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEE
Confidence            99888889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEEcc
Q 010330          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQ  361 (513)
Q Consensus       282 l~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l~g  361 (513)
                      |+|+|++...++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+|+||++.|+||+++++|++++|+|
T Consensus       229 ~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g  308 (371)
T PRK14287        229 VSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRG  308 (371)
T ss_pred             EccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCcEEEEcC
Confidence            99999987667789999999999999999999999999999999999999999999999998999999999999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          362 MGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       362 ~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      +|||..++ ..+|||||+|+|.+|+.|+.+|+++|++|+++.
T Consensus       309 ~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~  349 (371)
T PRK14287        309 KGVPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREFAGMS  349 (371)
T ss_pred             CCccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhh
Confidence            99997654 368999999999999999999999999999653

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-82  Score=665.87  Aligned_cols=350  Identities=39%  Similarity=0.705  Sum_probs=314.0

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC
Q 010330           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~  119 (513)
                      |...+|||+||||+++||.+|||+|||+||++||||+|++++++++|++|++||++|+||.+|+.||+||++++.+++++
T Consensus         1 ~~~~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~   80 (377)
T PRK14298          1 MATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA   80 (377)
T ss_pred             CCCCCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCc
Confidence            34458999999999999999999999999999999999888899999999999999999999999999999887643221


Q ss_pred             C-CCCCCC-CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCC
Q 010330          120 L-SNTSQG-VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSC  197 (513)
Q Consensus       120 ~-~~~~~g-~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C  197 (513)
                      + +.++.+ .++.|+|++|||+. +     + .      ....+.++.|+.++|.|||||+|+|+++++.+.+.+.|+.|
T Consensus        81 ~~~~~~~~~~~~~d~f~~~Fgg~-~-----~-~------~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C  147 (377)
T PRK14298         81 EDIFRGADFGGFGDIFEMFFGGG-G-----R-R------GRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTC  147 (377)
T ss_pred             ccccccCCcCcchhhhHhhhcCC-C-----c-c------CCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCC
Confidence            1 001111 23457888888541 0     0 0      01224578999999999999999999999999999999999


Q ss_pred             CCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCC
Q 010330          198 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (513)
Q Consensus       198 ~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G  277 (513)
                      +|+|...+....+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++.+.|..|+|.|++.+.++++|.||||+++|
T Consensus       148 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G  227 (377)
T PRK14298        148 SGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSG  227 (377)
T ss_pred             CCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCC
Confidence            99999998888999999999999998888889998889999999999999999999999999999999999999999999


Q ss_pred             CEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEE
Q 010330          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV  357 (513)
Q Consensus       278 ~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~  357 (513)
                      ++|+|+|+|+++..++.+|||||+|++++|+.|+|+|+||+++++|+|.|||+|+++.|+||||++.|+||+++++|+++
T Consensus       228 ~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~l  307 (377)
T PRK14298        228 LRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVF  307 (377)
T ss_pred             CEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCEE
Confidence            99999999999777788999999999999999999999999999999999999999999999999899999999999999


Q ss_pred             EEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          358 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       358 ~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      +|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus       308 ri~g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~~~  352 (377)
T PRK14298        308 RLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDELS  352 (377)
T ss_pred             EECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999997654 368999999999999999999999999999754

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.2e-82  Score=664.66  Aligned_cols=347  Identities=37%  Similarity=0.728  Sum_probs=312.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC--C
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG--L  120 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~--~  120 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|++||+||++++.+++++  +
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~   82 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG   82 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence            47999999999999999999999999999999999988899999999999999999999999999999887643211  0


Q ss_pred             CCCC----CC-CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeecc
Q 010330          121 SNTS----QG-VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (513)
Q Consensus       121 ~~~~----~g-~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~  195 (513)
                      +.++    .+ .++.|+|++|||+.    +  + ..     ....+.++.|+.+.|.|||||+|+|+++++.+.+.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~----~--~-~~-----~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~  150 (380)
T PRK14276         83 GFGGFDGSGGFGGFEDIFSSFFGGG----G--A-RR-----NPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCH  150 (380)
T ss_pred             CCCCccccccccchhhHHHHHhCcc----c--c-cc-----CcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCC
Confidence            1010    01 24457888888641    0  0 00     012235789999999999999999999999999999999


Q ss_pred             CCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCc
Q 010330          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (513)
Q Consensus       196 ~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~  275 (513)
                      .|+|+|........+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++...|..|+|.|++.+.++++|.||+|+.
T Consensus       151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (380)
T PRK14276        151 TCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVE  230 (380)
T ss_pred             CCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCcc
Confidence            99999999888889999999999999988999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCC
Q 010330          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGD  355 (513)
Q Consensus       276 ~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~  355 (513)
                      +|++|+|+|+|++...++.+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+|+||++.|+||+++++|+
T Consensus       231 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~  310 (380)
T PRK14276        231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGK  310 (380)
T ss_pred             CCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCC
Confidence            99999999999987666788999999999999999999999999999999999999999999999998999999999999


Q ss_pred             EEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 010330          356 TVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL  402 (513)
Q Consensus       356 ~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~  402 (513)
                      +++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|++.
T Consensus       311 ~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~~  356 (380)
T PRK14276        311 KFRLRGKGAPKLRG-GGNGDQHVTVNIVTPTKLNDAQKEALKAFAKA  356 (380)
T ss_pred             EEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999999997653 36899999999999999999999999999864

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.8e-82  Score=660.16  Aligned_cols=348  Identities=41%  Similarity=0.756  Sum_probs=312.9

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~~  122 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.+|++||+||++++.++.++++.
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~   82 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF   82 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence            47999999999999999999999999999999999988899999999999999999999999999999887643221110


Q ss_pred             C--C--CCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCC
Q 010330          123 T--S--QGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCG  198 (513)
Q Consensus       123 ~--~--~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~  198 (513)
                      +  .  .++++.|+|++|||+.  +.   +  .     ....+.++.|+.+.|.|||||+|+|+++++.+.+.+.|+.|+
T Consensus        83 ~~~~~~~~~~~~d~f~~~fgg~--~~---~--~-----~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~  150 (376)
T PRK14280         83 GGGDFGGGFGFEDIFSSFFGGG--GR---R--R-----DPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCH  150 (376)
T ss_pred             CCCCccccccchhhHHHHhCCc--cc---c--C-----cccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCC
Confidence            1  0  1224568899988631  00   0  0     011235789999999999999999999999999999999999


Q ss_pred             CCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCC
Q 010330          199 GTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA  278 (513)
Q Consensus       199 GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~  278 (513)
                      |+|........+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++...|..|+|.|++.+.++++|.||+|+.+|+
T Consensus       151 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~  230 (376)
T PRK14280        151 GSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQ  230 (376)
T ss_pred             CcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCc
Confidence            99999888889999999999999888899999999899999999999999999999999999999999999999999999


Q ss_pred             EEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEE
Q 010330          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVK  358 (513)
Q Consensus       279 ~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~  358 (513)
                      +|+|+|+|++...++.+|||||+|+|++|+.|+|+|+||+++++|||.|||+|+++.|+||||++.|+||+++++|++++
T Consensus       231 ~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~~~~  310 (376)
T PRK14280        231 QIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFR  310 (376)
T ss_pred             EEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCcEEE
Confidence            99999999987767789999999999999999999999999999999999999999999999998999999999999999


Q ss_pred             EccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          359 LQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       359 l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      |+|+|||.... ..+|||||+|+|.+|+.||++|+++|++|+++.
T Consensus       311 i~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~~~  354 (376)
T PRK14280        311 LKGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREFAELS  354 (376)
T ss_pred             EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99999997643 368999999999999999999999999999653

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-81  Score=659.70  Aligned_cols=349  Identities=35%  Similarity=0.611  Sum_probs=309.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~~  122 (513)
                      .+|||+||||+++||.+|||+|||+||++||||+|++++|+++|++|++||+||+||++|+.||+||++...++..+++.
T Consensus         2 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~   81 (378)
T PRK14278          2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGF   81 (378)
T ss_pred             CCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCC
Confidence            37999999999999999999999999999999999988899999999999999999999999999998643221110111


Q ss_pred             CCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCc
Q 010330          123 TSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGA  202 (513)
Q Consensus       123 ~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~  202 (513)
                      ++...++.|+|++|||+.    ++ + .     ..+..+.++.|+.+.|.|||||+|+|+++++.+.+.+.|+.|+|+|.
T Consensus        82 ~~~f~~~~d~f~~ffgg~----g~-~-~-----~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~  150 (378)
T PRK14278         82 GGGFGGLGDVFEAFFGGG----AA-S-R-----GPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGT  150 (378)
T ss_pred             CcCcCchhHHHHHHhCCC----CC-C-C-----CCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccC
Confidence            100013457899998642    10 0 0     00112457899999999999999999999999999999999999999


Q ss_pred             ccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEE
Q 010330          203 KSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI  282 (513)
Q Consensus       203 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl  282 (513)
                      .......+|+.|+|+|.++..+++.+|++++.++|+.|+|+|+++.+.|..|+|.|++.+.++++|.||||+++|++|+|
T Consensus       151 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  230 (378)
T PRK14278        151 AGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRL  230 (378)
T ss_pred             CCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEE
Confidence            98888899999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEecc-CCcEEEEeCCCCCCCCEEEEcc
Q 010330          283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETV-EGMKDLRIPSGVQPGDTVKLQQ  361 (513)
Q Consensus       283 ~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tl-dG~~~l~Ip~g~qpG~~~~l~g  361 (513)
                      +|+|++...++.+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+|| +|.+.|+||+++++|++++|+|
T Consensus       231 ~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g  310 (378)
T PRK14278        231 AAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRG  310 (378)
T ss_pred             ccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECC
Confidence            999999877778899999999999999999999999999999999999999999999 5567999999999999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          362 MGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       362 ~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      +|||..+. ..+|||||+|+|.||+.||++|+++|++|+.+.
T Consensus       311 ~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~~~  351 (378)
T PRK14278        311 RGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRELKALR  351 (378)
T ss_pred             CCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Confidence            99997653 468999999999999999999999999999753

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=2.9e-82  Score=669.63  Aligned_cols=358  Identities=30%  Similarity=0.549  Sum_probs=310.8

Q ss_pred             cccccccCCCCCcccccccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccc
Q 010330           20 FSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDD   99 (513)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~   99 (513)
                      ++|+|..+.+....++.....+..+|||++|||+++||.+|||+|||+||++||||+|++   .++|++|++||+||+||
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~   80 (421)
T PTZ00037          4 SGFPFDGMPGGGFDGGRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDP   80 (421)
T ss_pred             ccCCcccccCCCCCCCcccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccH
Confidence            356788755444332333333346899999999999999999999999999999999853   58999999999999999


Q ss_pred             hhhhhcccccccCCCccccCCCCCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeE
Q 010330          100 EKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESI  179 (513)
Q Consensus       100 ~kR~~YD~~G~~g~~~~~~~~~~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~  179 (513)
                      +||++||+||++++.++.       .+.++.|+|+.||++.    +  .         +..+.++.|+.+.|.|||+|+|
T Consensus        81 ~kR~~YD~~G~~~~~~~~-------~~~d~~d~f~~~Fggg----~--~---------~~~~~rg~di~~~l~vtLee~~  138 (421)
T PTZ00037         81 EKRKIYDEYGEEGLEGGE-------QPADASDLFDLIFGGG----R--K---------PGGKKRGEDIVSHLKVTLEQIY  138 (421)
T ss_pred             HHHHHHhhhcchhcccCC-------CCcchhhhHHHhhccc----c--c---------cccccCCCCEEEEeeeeHHHHh
Confidence            999999999998775321       1235678999998531    0  0         0123578999999999999999


Q ss_pred             eeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe--eeeeecCCc
Q 010330          180 FGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--DHCRRCGGN  257 (513)
Q Consensus       180 ~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--~~C~~C~G~  257 (513)
                      +|+++++.+.+.+.|+.|+|+|.... ...+|+.|+|+|.++...+.++.++++..+|+.|+|+|+++.  +.|..|+|.
T Consensus       139 ~G~~~~i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~  217 (421)
T PTZ00037        139 NGAMRKLAINKDVICANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGK  217 (421)
T ss_pred             CCCceEEEeeccccccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCc
Confidence            99999999999999999999998654 578999999999988777665533455679999999999986  679999999


Q ss_pred             eEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEe
Q 010330          258 GEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVE  337 (513)
Q Consensus       258 G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~  337 (513)
                      |++.+.++++|.||+|+.+|++|+|+|+|++.. ++.||||||+|++++|+.|+|+|+|||++++|+|+|||||+++.|+
T Consensus       218 g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~  296 (421)
T PTZ00037        218 GVKKTRKILEVNIDKGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYIT  296 (421)
T ss_pred             ceeeeeeEEEEeeCCCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEee
Confidence            999999999999999999999999999999864 5789999999999999999999999999999999999999999999


Q ss_pred             ccCCc-EEEEeCCC--CCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcC--CCCChhHHHHHHHHHhhcC
Q 010330          338 TVEGM-KDLRIPSG--VQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIP--KDISDPERALVEEIAFLKS  404 (513)
Q Consensus       338 tldG~-~~l~Ip~g--~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P--~~ls~~qr~lLe~l~~~~~  404 (513)
                      ||||+ +.|+||+|  ++||++++|+|+|||..++++.+|||||+|+|.||  +.||++|+++|++|+...+
T Consensus       297 tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~~~  368 (421)
T PTZ00037        297 HLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQNP  368 (421)
T ss_pred             CCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccCCC
Confidence            99997 78999998  99999999999999987765679999999999999  9999999999999997533

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-81  Score=661.53  Aligned_cols=354  Identities=39%  Similarity=0.740  Sum_probs=312.5

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccc-
Q 010330           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY-  117 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~-  117 (513)
                      |+..+|||++|||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||.+|+.||+||++++..+. 
T Consensus         1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~   80 (386)
T PRK14277          1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGF   80 (386)
T ss_pred             CCCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccc
Confidence            3445899999999999999999999999999999999984 67899999999999999999999999999998875321 


Q ss_pred             cCCC---CC----CCC---CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEE
Q 010330          118 DGLS---NT----SQG---VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIE  187 (513)
Q Consensus       118 ~~~~---~~----~~g---~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~  187 (513)
                      ++++   ++    +..   .++.|+|++||++.   |++.+   .   .....+.++.|+++.|.|||||+|+|+++++.
T Consensus        81 ~~~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~---fgg~~---~---~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~  151 (386)
T PRK14277         81 GQGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDF---FGTGR---R---RAETGPQKGADIRYDLELTFEEAAFGTEKEIE  151 (386)
T ss_pred             ccCCcCCCCccccCccccccchhHHHHHhhccc---ccCCC---c---CCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEE
Confidence            1100   01    001   12336788888642   33211   0   01112457899999999999999999999999


Q ss_pred             eeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEE
Q 010330          188 VSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMK  267 (513)
Q Consensus       188 ~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~  267 (513)
                      +.+.+.|+.|+|+|........+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++.+.|..|+|.|++.+.++++
T Consensus       152 ~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~  231 (386)
T PRK14277        152 VERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIK  231 (386)
T ss_pred             EEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEE
Confidence            99999999999999998888899999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEe
Q 010330          268 VVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRI  347 (513)
Q Consensus       268 V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~I  347 (513)
                      |.||+|+++|++|+|+|+|++...++.+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||++.|+|
T Consensus       232 V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~i  311 (386)
T PRK14277        232 VNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTI  311 (386)
T ss_pred             EecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEE
Confidence            99999999999999999999876667889999999999999999999999999999999999999999999999989999


Q ss_pred             CCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          348 PSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       348 p~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      |+++++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+++.
T Consensus       312 p~g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~~~  366 (386)
T PRK14277        312 PEGTQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKLTEKQKELLREFEKLS  366 (386)
T ss_pred             CCCCCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999997654 368999999999999999999999999999654

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-81  Score=657.67  Aligned_cols=342  Identities=35%  Similarity=0.635  Sum_probs=297.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~  121 (513)
                      .+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++|||||+||+||++||+||++++.++.+ ++
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~-~~   80 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGA-SQ   80 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCC-Cc
Confidence            479999999999999999999999999999999998 4679999999999999999999999999999987753211 00


Q ss_pred             CCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCC
Q 010330          122 NTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG  201 (513)
Q Consensus       122 ~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG  201 (513)
                      .+  ..++|+.|++||+..   ||+++ .++    .+.++.++.|+.+.|.|||+|+|+|+++++.+.+.+.|+.|+|+|
T Consensus        81 ~~--~~~~f~~~~~~F~~~---fg~g~-~~~----~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G  150 (369)
T PRK14288         81 SD--FSDFFEDLGSFFEDA---FGFGA-RGS----KRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTG  150 (369)
T ss_pred             cc--cccchhhHHHHHHhh---cCCCC-ccc----CcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcc
Confidence            01  113333333444321   22101 000    112245789999999999999999999999999999999999999


Q ss_pred             cccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEE
Q 010330          202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ  281 (513)
Q Consensus       202 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Ir  281 (513)
                      .... ...+|+.|+|+|.++..+    |++++.++|+.|+|+|+++.+.|..|+|.|++.+.++++|.||||+++|++|+
T Consensus       151 ~~~~-~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~  225 (369)
T PRK14288        151 AKDK-ALETCKQCNGQGQVFMRQ----GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMV  225 (369)
T ss_pred             cCCC-CCcCCCCCCCCcEEEEEe----ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEE
Confidence            9875 678999999999876543    77788889999999999999999999999999999999999999999999999


Q ss_pred             EccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEc
Q 010330          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQ  360 (513)
Q Consensus       282 l~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~  360 (513)
                      |+|+|++.. ++.+|||||+|+|++|+.|+|+|+|||++++|||.|||||+++.|+||||+ +.|+||++++||++++|+
T Consensus       226 l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~  304 (369)
T PRK14288        226 LKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFR  304 (369)
T ss_pred             EccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEc
Confidence            999999854 578999999999999999999999999999999999999999999999997 799999999999999999


Q ss_pred             cCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 010330          361 QMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL  402 (513)
Q Consensus       361 g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~  402 (513)
                      |+|||..+ +..+|||||+|+|.+|+.|+++|+++|++|+..
T Consensus       305 g~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~  345 (369)
T PRK14288        305 NEGVKHPE-SSYRGSLIVELQVIYPKSLNKEQQELLEKLHAS  345 (369)
T ss_pred             CCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999765 346899999999999999999999999999975

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-81  Score=657.55  Aligned_cols=348  Identities=37%  Similarity=0.716  Sum_probs=306.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~  121 (513)
                      ++|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|++||+||+++++.+.++++
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~   82 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence            479999999999999999999999999999999997 4678999999999999999999999999999988764321111


Q ss_pred             CCC-CC-----CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeecc
Q 010330          122 NTS-QG-----VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (513)
Q Consensus       122 ~~~-~g-----~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~  195 (513)
                      .++ .+     .++.|+|++|||+..++.     .++   .....+.++.|++++|.|||||+|+|+++++.+.+.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~~~-----~~~---~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~  154 (372)
T PRK14286         83 QGAYTDFSDIFGDFGDIFGDFFGGGRGGG-----SGG---GRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCV  154 (372)
T ss_pred             CCCcccccccccchhhHHHHhhCCCccCC-----Ccc---cccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCC
Confidence            110 11     234588999996421110     000   0112346789999999999999999999999999999999


Q ss_pred             CCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCc
Q 010330          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (513)
Q Consensus       196 ~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~  275 (513)
                      +|+|+|........+|+.|+|+|.++..+    |++++.++|+.|+|+|+++.+.|..|+|.|++.+.++++|.||+|+.
T Consensus       155 ~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (372)
T PRK14286        155 DCNGSGASKGSSPTTCPDCGGSGQIRRTQ----GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE  230 (372)
T ss_pred             CCcCCCcCCCCCCccCCCCcCeEEEEEEe----ceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence            99999999888889999999999886653    78888899999999999999999999999999999999999999999


Q ss_pred             CCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCCCCCC
Q 010330          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPG  354 (513)
Q Consensus       276 ~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG  354 (513)
                      +|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|+||+++++|
T Consensus       231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g  310 (372)
T PRK14286        231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESG  310 (372)
T ss_pred             CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCC
Confidence            9999999999999776677899999999999999999999999999999999999999999999997 799999999999


Q ss_pred             CEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          355 DTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       355 ~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      ++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|++++
T Consensus       311 ~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~~  358 (372)
T PRK14286        311 QVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFARES  358 (372)
T ss_pred             cEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence            999999999997654 368999999999999999999999999999865

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.2e-80  Score=651.09  Aligned_cols=350  Identities=37%  Similarity=0.714  Sum_probs=312.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCC-
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL-  120 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~-  120 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||.+|++||+||++++.++.+.+ 
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~   82 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS   82 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence            4799999999999999999999999999999999984 57899999999999999999999999999998876321111 


Q ss_pred             -CCCCCC----CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeecc
Q 010330          121 -SNTSQG----VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (513)
Q Consensus       121 -~~~~~g----~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~  195 (513)
                       +.++..    .++.|+|++|||+.   |++.+       .....+.++.|++++|.|||||+|+|+++++.+.+.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~---~g~~~-------~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~  152 (380)
T PRK14297         83 GGFGGFDFSDMGGFGDIFDSFFGGG---FGSSS-------RRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCE  152 (380)
T ss_pred             CCCCCcCcccccchhHHHHHHhccC---ccccc-------cccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCC
Confidence             111111    13458899999641   21100       0112245789999999999999999999999999999999


Q ss_pred             CCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCc
Q 010330          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (513)
Q Consensus       196 ~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~  275 (513)
                      .|+|+|..++....+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++...|..|+|.|++.+.++++|.||+|+.
T Consensus       153 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~  232 (380)
T PRK14297        153 TCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVD  232 (380)
T ss_pred             CcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCC
Confidence            99999999888889999999999999888899999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCC
Q 010330          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGD  355 (513)
Q Consensus       276 ~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~  355 (513)
                      +|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+|+||++.|+||+++++|+
T Consensus       233 ~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~  312 (380)
T PRK14297        233 TGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGT  312 (380)
T ss_pred             CCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCC
Confidence            99999999999987667789999999999999999999999999999999999999999999999998999999999999


Q ss_pred             EEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          356 TVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       356 ~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      +++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+...
T Consensus       313 ~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~  359 (380)
T PRK14297        313 VFRLKGKGVPRVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS  359 (380)
T ss_pred             EEEEcCCCcCCCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence            99999999997643 468999999999999999999999999999764

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.4e-80  Score=650.08  Aligned_cols=347  Identities=37%  Similarity=0.686  Sum_probs=301.0

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC-CC
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG-LS  121 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~-~~  121 (513)
                      .|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+|+.||++||+||++++..+.++ ++
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~   80 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG   80 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence            489999999999999999999999999999999984 6789999999999999999999999999999876432110 00


Q ss_pred             CCCCC---------------C-CcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEE
Q 010330          122 NTSQG---------------V-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRG  185 (513)
Q Consensus       122 ~~~~g---------------~-d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~  185 (513)
                      ++..+               + ++.|+|++||++.++.|++     .   .....+.++.|+.+.|.|||||+|+|++++
T Consensus        81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~-----~---~~~~~~~~g~d~~~~l~vslee~~~G~~~~  152 (391)
T PRK14284         81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGM-----R---GGPAGARQGASKKVHITLSFEEAAKGVEKE  152 (391)
T ss_pred             CCcCcccchhhhccccccccccccccchhhhccCccccccc-----c---ccCCCcCCCCCeEEEEEEEHHHHhCCeeEE
Confidence            01000               0 0125566666432111110     0   001124578999999999999999999999


Q ss_pred             EEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeE
Q 010330          186 IEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRS  265 (513)
Q Consensus       186 v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~  265 (513)
                      +.+.+.+.|++|+|+|+.......+|+.|+|+|.++..+    |++++..+|+.|+|+|+++.+.|..|+|.|++.+.++
T Consensus       153 i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~  228 (391)
T PRK14284        153 LLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSR----GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRS  228 (391)
T ss_pred             EEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEe----ceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEE
Confidence            999999999999999999988889999999999887543    7788889999999999999999999999999999999


Q ss_pred             EEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccC--CcE
Q 010330          266 MKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVE--GMK  343 (513)
Q Consensus       266 l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tld--G~~  343 (513)
                      ++|.||||+.+|++|+|+|+|+++..++.+|||||+|++++|+.|+|+|+||+++++|||.|||+|++++|+|||  +.+
T Consensus       229 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i  308 (391)
T PRK14284        229 VHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTC  308 (391)
T ss_pred             EEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEE
Confidence            999999999999999999999998878899999999999999999999999999999999999999999999999  567


Q ss_pred             EEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          344 DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       344 ~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      +|+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus       309 ~v~Ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~  367 (391)
T PRK14284        309 RLTIPEGIQSGTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFAATE  367 (391)
T ss_pred             EEEECCccCCCeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99999999999999999999997653 368999999999999999999999999999653

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1e-79  Score=648.88  Aligned_cols=357  Identities=36%  Similarity=0.677  Sum_probs=308.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCcccc--C
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD--G  119 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~--~  119 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+|+.+|+.||+||++++.+...  +
T Consensus         2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~   81 (397)
T PRK14281          2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG   81 (397)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCC
Confidence            4799999999999999999999999999999999984 578899999999999999999999999999988763211  1


Q ss_pred             C-CCCCCCCCcccc---cccccCCCCCCCCCC------CCCCCc-cccCCCCCCCCcceeEeeeccceeeEeeeEEEEEe
Q 010330          120 L-SNTSQGVDPFEL---YSAFFGGSDGLFGGV------GEAGGI-NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEV  188 (513)
Q Consensus       120 ~-~~~~~g~d~~dl---F~~fFgg~~g~fg~~------g~~g~~-~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~  188 (513)
                      + +.+..+.++.|+   |++|||+.. ++++.      +.+++. ....+..+.++.|+++.|.|||||+|+|+++++.+
T Consensus        82 ~~~~~~~~~~~~d~f~~f~~~Fgg~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~  160 (397)
T PRK14281         82 GPGYGGGGGDFNDIFSAFNDMFGGGA-RRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKI  160 (397)
T ss_pred             CCCCCcCCCCHHHHHHHHHHHhCCCc-ccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEE
Confidence            0 101112233344   457886421 11100      000110 00001123578999999999999999999999999


Q ss_pred             eeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEE
Q 010330          189 SCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKV  268 (513)
Q Consensus       189 ~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V  268 (513)
                      .+.+.|+.|+|+|.... ...+|+.|+|+|.++..+++.+|++++..+|+.|+|+|+++.+.|..|+|.|++.+.++++|
T Consensus       161 ~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V  239 (397)
T PRK14281        161 KKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKV  239 (397)
T ss_pred             EeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEE
Confidence            99999999999999876 67899999999999998899999999999999999999999999999999999999999999


Q ss_pred             EcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeC
Q 010330          269 VIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIP  348 (513)
Q Consensus       269 ~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip  348 (513)
                      .||+|+++|++|+|+|+|++...++.+|||||+|++++|+.|+|+|+||+++++|+|.|||+|+++.|+||||++.|+||
T Consensus       240 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip  319 (397)
T PRK14281        240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIP  319 (397)
T ss_pred             ecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeC
Confidence            99999999999999999999776778999999999999999999999999999999999999999999999999899999


Q ss_pred             CCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 010330          349 SGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL  402 (513)
Q Consensus       349 ~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~  402 (513)
                      +++++|++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|++.
T Consensus       320 ~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~  372 (397)
T PRK14281        320 AGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELKKS  372 (397)
T ss_pred             CccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence            999999999999999997653 36899999999999999999999999999964

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.1e-79  Score=641.39  Aligned_cols=351  Identities=37%  Similarity=0.685  Sum_probs=309.2

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~  119 (513)
                      +.+|||++|||+++||.+|||+|||+||++||||+|+.  +.|+++|++|++||+||+||++|++||+||++++...+.+
T Consensus         2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~   81 (369)
T PRK14282          2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE   81 (369)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence            35899999999999999999999999999999999974  5688999999999999999999999999998876532111


Q ss_pred             -CCCCC-CC-----C-Cc--ccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEee
Q 010330          120 -LSNTS-QG-----V-DP--FELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVS  189 (513)
Q Consensus       120 -~~~~~-~g-----~-d~--~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~  189 (513)
                       ++.++ ..     + ++  .|+|+.|||+.    ++ +   +   ..+..+.+++|+.+.|.|||+|+|+|+++++.+.
T Consensus        82 ~~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~----~~-~---~---~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~  150 (369)
T PRK14282         82 TESGGGFFEDIFKDFENIFNRDIFDIFFGER----RT-Q---E---EQREYARRGEDIRYEIEVTLSDLINGAEIPVEYD  150 (369)
T ss_pred             CCCCCcccccccccccccccchhhhHhhccc----CC-c---c---cccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEee
Confidence             01111 00     1 11  15666666431    00 0   0   0112345789999999999999999999999999


Q ss_pred             eeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEE
Q 010330          190 CFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVV  269 (513)
Q Consensus       190 r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~  269 (513)
                      +.+.|+.|+|+|+.......+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++.+.|..|+|.|++.+.++++|.
T Consensus       151 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~  230 (369)
T PRK14282        151 RYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVK  230 (369)
T ss_pred             ecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEE
Confidence            99999999999999888889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeC
Q 010330          270 IPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIP  348 (513)
Q Consensus       270 IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip  348 (513)
                      ||+|+.+|++|+|+|+|+++..++.+|||||+|++++|+.|+|+|+||+++++|+|.||++|+++.|+|+||+ +.|+||
T Consensus       231 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip  310 (369)
T PRK14282        231 IPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIP  310 (369)
T ss_pred             eCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeC
Confidence            9999999999999999998777788999999999999999999999999999999999999999999999997 799999


Q ss_pred             CCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhcC
Q 010330          349 SGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKS  404 (513)
Q Consensus       349 ~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~~  404 (513)
                      +++++|++++|+|+|||..+. +.+|||||+|+|.+|+.|+.+++++|++|++++.
T Consensus       311 ~g~~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~~~  365 (369)
T PRK14282        311 PGTQPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKELAKKRG  365 (369)
T ss_pred             CCcCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999997543 4689999999999999999999999999998654

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-79  Score=647.40  Aligned_cols=353  Identities=33%  Similarity=0.586  Sum_probs=298.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC--
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG--  119 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~--  119 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||+||++||+||+++..++..+  
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~~   87 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRR   87 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccccc
Confidence            589999999999999999999999999999999998 46789999999999999999999999999997533211110  


Q ss_pred             ----CCCCC-------CCCCcccccccccCCCCCC----CCCCCCCC-CccccCCCCCCCCcceeEeeeccceeeEeeeE
Q 010330          120 ----LSNTS-------QGVDPFELYSAFFGGSDGL----FGGVGEAG-GINFNFGNKGNFGLDIRYDLHLSFEESIFGGQ  183 (513)
Q Consensus       120 ----~~~~~-------~g~d~~dlF~~fFgg~~g~----fg~~g~~g-~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~  183 (513)
                          ++.++       .++++.++|+.++++..+.    |+++  ++ +........+.++.|+++.|.|||||+|+|++
T Consensus        88 ~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~--fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~  165 (392)
T PRK14279         88 FDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGL--FNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVT  165 (392)
T ss_pred             ccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhh--hcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeE
Confidence                00000       1123333332211110000    1100  00 00000112345789999999999999999999


Q ss_pred             EEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeee
Q 010330          184 RGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSK  263 (513)
Q Consensus       184 k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~  263 (513)
                      +++.+.+.+.|+.|+|+|........+|+.|+|+|.++..+    |++++..+|+.|+|+|+++.+.|..|.|.|++.+.
T Consensus       166 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~  241 (392)
T PRK14279        166 MPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ----GAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRT  241 (392)
T ss_pred             EEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe----cceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEe
Confidence            99999999999999999999888899999999999887653    67778899999999999999999999999999999


Q ss_pred             eEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcE
Q 010330          264 RSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMK  343 (513)
Q Consensus       264 k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~  343 (513)
                      ++++|.||+|+++|++|+|+|+|++..+++.+|||||+|+|++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||++
T Consensus       242 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i  321 (392)
T PRK14279        242 RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPV  321 (392)
T ss_pred             eeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceE
Confidence            99999999999999999999999998777788999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          344 DLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       344 ~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      .|+||+++++|++++|+|+|||..  ++.+|||||+|+|.||+.|+++|+++|++|+.+.
T Consensus       322 ~v~Ip~g~~~g~~iri~g~G~p~~--~~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~~~  379 (392)
T PRK14279        322 GVKVPAGTADGRILRVRGRGVPKR--SGGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAE  379 (392)
T ss_pred             EEEECCCCCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999999999999999999963  3468999999999999999999999999999863

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.7e-79  Score=639.18  Aligned_cols=346  Identities=30%  Similarity=0.621  Sum_probs=305.7

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~  121 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||.+|+.||+||++++.++.+.++
T Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~   81 (365)
T PRK14285          2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG   81 (365)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCccc
Confidence            4799999999999999999999999999999999974 678899999999999999999999999999988754321101


Q ss_pred             --CCCCC-----CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeec
Q 010330          122 --NTSQG-----VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETC  194 (513)
Q Consensus       122 --~~~~g-----~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C  194 (513)
                        ++..+     .++.|+|++|||+.   .+. +        ....+.++.|+.++|.|||||+|+|+++++.+.+.+.|
T Consensus        82 ~~~g~~~~~~~~~~~~d~f~~~fgg~---~~~-~--------~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C  149 (365)
T PRK14285         82 FSGGFSGFSDIFEDFGDIFDSFFTGN---RGQ-D--------KNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLC  149 (365)
T ss_pred             cCCCccccccccccHHHHHHHhhcCC---cCC-C--------CCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccC
Confidence              01011     13447788888531   000 0        01123578999999999999999999999999999999


Q ss_pred             cCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCC
Q 010330          195 DSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGV  274 (513)
Q Consensus       195 ~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv  274 (513)
                      +.|+|+|.........|+.|+|+|+++.    .+|++++..+|+.|+|+|+++.+.|..|+|.|++.+.++++|.||||+
T Consensus       150 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~----~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~  225 (365)
T PRK14285        150 ESCLGKKSEKGTSPSICNMCNGSGRVMQ----GGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGI  225 (365)
T ss_pred             CCCCCcccCCCCCCccCCCccCceeEEe----cCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCC
Confidence            9999999998888899999999998764    458888889999999999999999999999999999999999999999


Q ss_pred             cCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCCCCC
Q 010330          275 SNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQP  353 (513)
Q Consensus       275 ~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qp  353 (513)
                      ++|++|+|+|+|++...++.+|||||+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|+||+++++
T Consensus       226 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~  305 (365)
T PRK14285        226 DDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTEN  305 (365)
T ss_pred             CCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCC
Confidence            99999999999999876778999999999999999999999999999999999999999999999996 78999999999


Q ss_pred             CCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhcCC
Q 010330          354 GDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSP  405 (513)
Q Consensus       354 G~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~~~  405 (513)
                      |++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+++..+
T Consensus       306 g~~irl~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~~~~  356 (365)
T PRK14285        306 DEQIIIKNEGMPILHT-EKFGNLILIIKIKTPKNLNSNAIKLLENLSKELKD  356 (365)
T ss_pred             CcEEEECCCCccCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHhcc
Confidence            9999999999997654 35799999999999999999999999999988765

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.1e-79  Score=639.75  Aligned_cols=352  Identities=38%  Similarity=0.627  Sum_probs=301.2

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhccc----ccccCCCcc
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDR----FGEAGITGE  116 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~----~G~~g~~~~  116 (513)
                      +.+|||+||||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||.+|++||+    ||++++.++
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~   86 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG   86 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence            45899999999999999999999999999999999974 5789999999999999999999999999    999887532


Q ss_pred             ccCCCCCCCCCCcccccccccCCCC-C--------CCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEE
Q 010330          117 YDGLSNTSQGVDPFELYSAFFGGSD-G--------LFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIE  187 (513)
Q Consensus       117 ~~~~~~~~~g~d~~dlF~~fFgg~~-g--------~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~  187 (513)
                      .+++++++..+++.++|+.++++.+ +        .|++  .+++.  .....+.++.|+.++|.|||||+|+|+++++.
T Consensus        87 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~--~fg~~--~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~  162 (389)
T PRK14295         87 PGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGG--LFNRG--GRRTQPRRGADVESEVTLSFTEAIDGATVPLR  162 (389)
T ss_pred             CCCCCCCCCCcccccccccccccccccccccchhhhhcc--cccCC--CCCCCCCCCCCEEEEEEEEHHHHhCCceEEEE
Confidence            1111011112244455543321100 0        0110  00100  01123457899999999999999999999999


Q ss_pred             eeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEE
Q 010330          188 VSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMK  267 (513)
Q Consensus       188 ~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~  267 (513)
                      +.+.+.|++|+|+|........+|+.|+|+|.++..+    |+|++..+|+.|+|+|+++.+.|..|.|.|++.+.++++
T Consensus       163 ~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~  238 (389)
T PRK14295        163 LTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS----GGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQ  238 (389)
T ss_pred             eeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe----cceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEE
Confidence            9999999999999999988889999999999987653    677788899999999999999999999999999999999


Q ss_pred             EEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCC-cEEEE
Q 010330          268 VVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG-MKDLR  346 (513)
Q Consensus       268 V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG-~~~l~  346 (513)
                      |.||+|+++|++|+|+|+|++...++.+|||||+|+|++|+.|+|+|+||+++++|+|.+||+|++++|+|||| .+.|+
T Consensus       239 V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~  318 (389)
T PRK14295        239 VRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVK  318 (389)
T ss_pred             EEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEE
Confidence            99999999999999999999877777899999999999999999999999999999999999999999999999 47999


Q ss_pred             eCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          347 IPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       347 Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      ||+++++|++++|+|+|||..  ++.+|||||+|+|.||+.|+++|+++|++|++..
T Consensus       319 ip~g~~~g~~iri~G~G~p~~--~~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~~~  373 (389)
T PRK14295        319 LPPGTPNGRVLRVRGKGAVRK--DGTRGDLLVTVEVAVPKDLSGKAREALEAFREAT  373 (389)
T ss_pred             ECCccCCCcEEEECCCCcCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999999999999999964  3468999999999999999999999999999754

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1e-78  Score=636.53  Aligned_cols=344  Identities=38%  Similarity=0.709  Sum_probs=302.0

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~  121 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|+.||+||++++.++.++++
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g   82 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG   82 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence            4799999999999999999999999999999999974 668899999999999999999999999999988764211111


Q ss_pred             CCCCCCCcc----cccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCC
Q 010330          122 NTSQGVDPF----ELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSC  197 (513)
Q Consensus       122 ~~~~g~d~~----dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C  197 (513)
                      .. ...+++    |+|++|||+.     +.+  +.    ....+.++.|+.+.|.|||||+|+|+++++.+.+.+.|+.|
T Consensus        83 ~~-~~~~~~~~f~d~f~~~fg~g-----~~~--~~----~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C  150 (373)
T PRK14301         83 FS-SAEDIFSHFSDIFGDLFGFS-----GGG--SR----RGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDC  150 (373)
T ss_pred             cc-cccccccchHHHHHHHhhcc-----Ccc--cc----cCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCC
Confidence            10 011222    4555555311     000  00    11234678999999999999999999999999999999999


Q ss_pred             CCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCC
Q 010330          198 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (513)
Q Consensus       198 ~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G  277 (513)
                      +|+|........+|+.|+|+|.++..+    |++++..+|+.|+|+|+++.+.|..|+|.|++.+.++++|.||+|+++|
T Consensus       151 ~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G  226 (373)
T PRK14301        151 GGSGAAPGTSPETCRHCGGSGQVRQSQ----GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTG  226 (373)
T ss_pred             CCcccCCCCCCcccCCccCeeEEEEEe----eeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCC
Confidence            999999888889999999999987542    7788889999999999999999999999999999999999999999999


Q ss_pred             CEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEE
Q 010330          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV  357 (513)
Q Consensus       278 ~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~  357 (513)
                      ++|+|+|+|++...++.+|||||+|+|++|+.|+|+|+||+++++|+|.+||+|+++.|+||||++.|+||+++++|+++
T Consensus       227 ~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~  306 (373)
T PRK14301        227 SRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVF  306 (373)
T ss_pred             CEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEE
Confidence            99999999998776778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          358 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       358 ~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      +|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+.+.
T Consensus       307 ri~g~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~~~  351 (373)
T PRK14301        307 RLRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEALE  351 (373)
T ss_pred             EEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999998654 368999999999999999999999999999753

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.4e-78  Score=632.71  Aligned_cols=345  Identities=38%  Similarity=0.718  Sum_probs=304.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~  121 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|+ +++++++|++|++||+||+||.+|+.||+||++++.++..+ +
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~-~   81 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFS-G   81 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCC-C
Confidence            589999999999999999999999999999999998 46789999999999999999999999999999887642111 1


Q ss_pred             CCCCC---CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCC
Q 010330          122 NTSQG---VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCG  198 (513)
Q Consensus       122 ~~~~g---~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~  198 (513)
                      .++..   .++.|+|++|||..  +++  +   +   .....+.++.|+.+.|.|||||+|+|+++++.+.+.+.|+.|+
T Consensus        82 ~~~~~~~~~~~~d~f~~~fg~g--~~~--~---~---~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~  151 (366)
T PRK14294         82 FSGFDDIFSSFGDIFEDFFGFG--GGR--R---G---RSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECH  151 (366)
T ss_pred             cCccccchhhhhhhHHHhhccC--CCc--C---C---cccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCC
Confidence            11110   12347788888510  000  0   0   0011245789999999999999999999999999999999999


Q ss_pred             CCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCC
Q 010330          199 GTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA  278 (513)
Q Consensus       199 GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~  278 (513)
                      |+|........+|+.|+|+|.++...    |++++..+|+.|+|+|+++.+.|..|+|.|++.+.++++|.||+|+++|+
T Consensus       152 G~G~~~~~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  227 (366)
T PRK14294        152 GSGCEPGTSPTTCPQCGGSGQVTQSQ----GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGS  227 (366)
T ss_pred             CccccCCCCcccCCCcCCeEEEEEEe----eeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCc
Confidence            99999888889999999999886532    78888899999999999999999999999999999999999999999999


Q ss_pred             EEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEE
Q 010330          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVK  358 (513)
Q Consensus       279 ~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~  358 (513)
                      +|+|+|+|++...++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+||||++.|+||+++++|++++
T Consensus       228 ~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~ir  307 (366)
T PRK14294        228 RLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFR  307 (366)
T ss_pred             EEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEE
Confidence            99999999987777889999999999999999999999999999999999999999999999998999999999999999


Q ss_pred             EccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          359 LQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       359 l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      |+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus       308 i~G~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~  351 (366)
T PRK14294        308 FKGKGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARLE  351 (366)
T ss_pred             ECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence            99999997654 368999999999999999999999999999764

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-77  Score=631.44  Aligned_cols=358  Identities=37%  Similarity=0.682  Sum_probs=310.7

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC
Q 010330           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (513)
Q Consensus        41 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~  119 (513)
                      +..+|||++|||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||++|+||.+|++||+||+++++++.+.
T Consensus         2 ~~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~   81 (386)
T PRK14289          2 AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGG   81 (386)
T ss_pred             CccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCC
Confidence            346899999999999999999999999999999999974 5789999999999999999999999999999887532111


Q ss_pred             CCCCCCCCCccccccc---ccCCCCCCCCCCCCCCCcc-ccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeecc
Q 010330          120 LSNTSQGVDPFELYSA---FFGGSDGLFGGVGEAGGIN-FNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (513)
Q Consensus       120 ~~~~~~g~d~~dlF~~---fFgg~~g~fg~~g~~g~~~-~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~  195 (513)
                      ++.++.++++.|+|+.   +|+++.+++++   .+.+. ......+.++.|+++.|.|||||+|+|+++++.+.+.+.|+
T Consensus        82 ~~~~~~~~~~~~~f~~f~~~fg~~~gg~~~---~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~  158 (386)
T PRK14289         82 GGFSGEGMSMEDIFSMFGDIFGGHGGGFGG---FGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCS  158 (386)
T ss_pred             CCCCCCCcChhhhhHHhhhhhcccccCccc---ccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccC
Confidence            1111112334455443   35432111110   00000 00112245789999999999999999999999999999999


Q ss_pred             CCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCc
Q 010330          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (513)
Q Consensus       196 ~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~  275 (513)
                      .|+|+|.........|+.|+|+|.++..+++++|++++..+|+.|+|+|+++...|..|+|.|++.+.++++|.||+|++
T Consensus       159 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~  238 (386)
T PRK14289        159 HCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVA  238 (386)
T ss_pred             CCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCC
Confidence            99999999888889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCC
Q 010330          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGD  355 (513)
Q Consensus       276 ~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~  355 (513)
                      +|++|+|+|+|++...++.+|||||+|++++|+.|+|+++||++++.|+|.+|++|+++.|+|+||++.|+||+++++|+
T Consensus       239 ~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~  318 (386)
T PRK14289        239 EGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGK  318 (386)
T ss_pred             CCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCc
Confidence            99999999999987667789999999999999999999999999999999999999999999999998999999999999


Q ss_pred             EEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 010330          356 TVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL  402 (513)
Q Consensus       356 ~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~  402 (513)
                      +++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|++.
T Consensus       319 ~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~  364 (386)
T PRK14289        319 VLRLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENS  364 (386)
T ss_pred             EEEECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence            99999999997654 36899999999999999999999999999985

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-77  Score=628.53  Aligned_cols=346  Identities=35%  Similarity=0.675  Sum_probs=303.5

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccc--cC-C
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY--DG-L  120 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~--~~-~  120 (513)
                      +|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+|+.+|+.||+||++++.++.  ++ +
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~g   82 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGG   82 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCCC
Confidence            79999999999999999999999999999999998778999999999999999999999999999998875321  10 1


Q ss_pred             CCCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCC
Q 010330          121 SNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGT  200 (513)
Q Consensus       121 ~~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~Gt  200 (513)
                      +.++.+.++.++|++||+++   |++.+   .  ......+.++.|+.+.|.|||+|+|+|+++++.+.+.+.|+.|+|+
T Consensus        83 ~~~~~~~~~~~~f~~~f~~~---~gg~~---~--~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~  154 (372)
T PRK14300         83 NHGGFHPDINDIFGDFFSDF---MGGSR---R--SRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGS  154 (372)
T ss_pred             CCCccccchhhhHHHHHHhh---cCCCC---C--CCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCc
Confidence            10111113346777777542   22111   0  0011123578999999999999999999999999999999999999


Q ss_pred             CcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEE
Q 010330          201 GAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM  280 (513)
Q Consensus       201 G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~I  280 (513)
                      |...+....+|+.|+|+|.++..    +|++++..+|+.|+|+|+++.+.|..|+|.|++.+.+.++|.||+|+++|++|
T Consensus       155 g~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i  230 (372)
T PRK14300        155 GSEKGETVTTCDACSGVGATRMQ----QGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI  230 (372)
T ss_pred             ccCCCCCCccCCCccCeEEEEEe----eceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence            99988888999999999988653    37888888999999999999999999999999999999999999999999999


Q ss_pred             EEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCC-cEEEEeCCCCCCCCEEEE
Q 010330          281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG-MKDLRIPSGVQPGDTVKL  359 (513)
Q Consensus       281 rl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG-~~~l~Ip~g~qpG~~~~l  359 (513)
                      +++|+|++..+++.+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+|||| .++|+||+|+++|++++|
T Consensus       231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri  310 (372)
T PRK14300        231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRL  310 (372)
T ss_pred             EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEE
Confidence            9999999877778899999999999999999999999999999999999999999999998 579999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 010330          360 QQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL  402 (513)
Q Consensus       360 ~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~  402 (513)
                      +|+|||..+. ..+|||||+|+|.||++||++|+++|++|+++
T Consensus       311 ~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~~  352 (372)
T PRK14300        311 RSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKKE  352 (372)
T ss_pred             CCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999997643 36899999999999999999999999999864

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-77  Score=628.19  Aligned_cols=346  Identities=39%  Similarity=0.715  Sum_probs=300.6

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCC
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL  120 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~  120 (513)
                      +.+|||++|||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+|+.+|+.||+||++++..+.+++
T Consensus         2 ~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (371)
T PRK10767          2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGG   81 (371)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCC
Confidence            3579999999999999999999999999999999997 466889999999999999999999999999998876432111


Q ss_pred             CCCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCC
Q 010330          121 SNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGT  200 (513)
Q Consensus       121 ~~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~Gt  200 (513)
                      +.++. .++.|+|++||+.+   ||+++  +.    .+..+.++.|+.+.|.|||||+|+|+++++.+.+.+.|+.|+|+
T Consensus        82 ~~~~~-~~~~~~f~~~f~~~---fgg~~--~~----~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~  151 (371)
T PRK10767         82 GFGGG-GGFGDIFGDIFGDI---FGGGR--GG----GRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGS  151 (371)
T ss_pred             CCCCc-cccccchhhhhhhh---ccCCc--cc----cCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCc
Confidence            11110 01123344444321   22100  00    01224678999999999999999999999999999999999999


Q ss_pred             CcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEE
Q 010330          201 GAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM  280 (513)
Q Consensus       201 G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~I  280 (513)
                      |.........|+.|+|+|.++..+    |++++..+|+.|+|+|+++.+.|..|.|.|++.+.+.++|.||+|+.+|++|
T Consensus       152 G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i  227 (371)
T PRK10767        152 GAKPGTSPKTCPTCHGAGQVRMQQ----GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI  227 (371)
T ss_pred             ccCCCCCCccCCCCCCeeEEEEee----ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence            999888888999999999876543    7788788999999999999999999999999999999999999999999999


Q ss_pred             EEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEEc
Q 010330          281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQ  360 (513)
Q Consensus       281 rl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l~  360 (513)
                      +|+|+|++..+++.+|||||+|++++|+.|+|+|+||++++.|+|.+||+|+++.|+||||.+.|+||+++++|++++|+
T Consensus       228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~  307 (371)
T PRK10767        228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLR  307 (371)
T ss_pred             EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEEC
Confidence            99999998766778999999999999999999999999999999999999999999999998899999999999999999


Q ss_pred             cCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 010330          361 QMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL  402 (513)
Q Consensus       361 g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~  402 (513)
                      |+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus       308 g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~~  348 (371)
T PRK10767        308 GKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFEES  348 (371)
T ss_pred             CCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            999997654 46899999999999999999999999999964

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-77  Score=629.15  Aligned_cols=356  Identities=37%  Similarity=0.685  Sum_probs=307.0

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC
Q 010330           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~  119 (513)
                      |+.++|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+|+.+|++||+||++++.+....
T Consensus         1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~   80 (378)
T PRK14283          1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQE   80 (378)
T ss_pred             CCCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccccc
Confidence            45578999999999999999999999999999999999888899999999999999999999999999999877521100


Q ss_pred             CCCCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCC
Q 010330          120 LSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (513)
Q Consensus       120 ~~~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~G  199 (513)
                      +.  ..+.++.++|..|+++.+..|..++ +++.   ....+.++.|+.++|.|||+|+|+|+++++.+.+.+.|+.|+|
T Consensus        81 ~~--~~~~~~~~~~~~~~~~~~~~f~~~~-fgg~---~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G  154 (378)
T PRK14283         81 DI--FNNINFEDIFQGFGFGIGNIFDMFG-FGGG---SRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNG  154 (378)
T ss_pred             cc--ccccCccccccccccchhhhccccc-cCCC---CCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCc
Confidence            00  0011122333332211000011000 0000   0112357899999999999999999999999999999999999


Q ss_pred             CCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCE
Q 010330          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT  279 (513)
Q Consensus       200 tG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~  279 (513)
                      +|...+.....|+.|+|+|.++..+++++|++++..+|+.|+|+|+.+.+.|..|+|.|++.+.+.++|.||+|+++|++
T Consensus       155 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~  234 (378)
T PRK14283        155 SRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSR  234 (378)
T ss_pred             cccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcE
Confidence            99998888899999999999999889999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEE
Q 010330          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKL  359 (513)
Q Consensus       280 Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l  359 (513)
                      |+|+|+|++...++.+|||||+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+||||.+.|.||+++++|++++|
T Consensus       235 i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri  314 (378)
T PRK14283        235 LRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRL  314 (378)
T ss_pred             EEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEE
Confidence            99999999876667899999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 010330          360 QQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL  402 (513)
Q Consensus       360 ~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~  402 (513)
                      +|+|||.... ..+|||||+|+|.||+.|+++|+++|++|++.
T Consensus       315 ~g~G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~~  356 (378)
T PRK14283        315 KGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFASI  356 (378)
T ss_pred             CCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence            9999997653 36899999999999999999999999999864

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-77  Score=629.00  Aligned_cols=357  Identities=36%  Similarity=0.650  Sum_probs=306.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCC-C
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL-S  121 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~-~  121 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.+|++||+||++++..+.+.. +
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~   81 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG   81 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCcccc
Confidence            479999999999999999999999999999999999888999999999999999999999999999998775422110 0


Q ss_pred             -CC---CCCCCcccccccccCCCC--CCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeecc
Q 010330          122 -NT---SQGVDPFELYSAFFGGSD--GLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (513)
Q Consensus       122 -~~---~~g~d~~dlF~~fFgg~~--g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~  195 (513)
                       .+   ..+.++.|+|++||+.++  +.|++.+..++ .......+.++.|+.+.|.|||+|+|+|+++++.+.+.+.|+
T Consensus        82 ~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~-~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~  160 (382)
T PRK14291         82 QEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRE-RRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCE  160 (382)
T ss_pred             ccccccccCCCHHHHHHHHHHhccccccccccccccc-cccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCC
Confidence             01   012245577887753221  11221100000 000112245789999999999999999999999999999999


Q ss_pred             CCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCc
Q 010330          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (513)
Q Consensus       196 ~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~  275 (513)
                      .|+|+|........+|+.|+|+|.++..    .|++++..+|+.|+|+|. +.+.|..|+|.|++.+.++++|.||||+.
T Consensus       161 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  235 (382)
T PRK14291        161 ACGGTGYDPGSGEKVCPTCGGSGEIYQR----GGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPPGVD  235 (382)
T ss_pred             CCccccCCCCCCCccCCCCCCceEEEEe----cceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCCCCC
Confidence            9999999988889999999999988764    267778899999999995 78899999999999999999999999999


Q ss_pred             CCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCCCCCC
Q 010330          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPG  354 (513)
Q Consensus       276 ~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG  354 (513)
                      +|++|+|+|+|+++..++.+|||||+|++++|+.|+|+|+||++++.|+|.||++|+++.|+|+||+ ++|+||+|+++|
T Consensus       236 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G  315 (382)
T PRK14291        236 NGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEG  315 (382)
T ss_pred             CCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCC
Confidence            9999999999999877889999999999999999999999999999999999999999999999997 799999999999


Q ss_pred             CEEEEccCCCCCCCCCCCCCcEEEEEEEEcCC--CCC------hhHHHHHHHHHhhcCCC
Q 010330          355 DTVKLQQMGVPDINNPSVRGDHLFIVNVLIPK--DIS------DPERALVEEIAFLKSPG  406 (513)
Q Consensus       355 ~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~--~ls------~~qr~lLe~l~~~~~~~  406 (513)
                      ++++|+|+|||..+. ..+|||||+|+|.||+  .|+      ++|+++|++|+.++...
T Consensus       316 ~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~~~~~~  374 (382)
T PRK14291        316 DKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDKLLPEP  374 (382)
T ss_pred             CEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHhhcCCc
Confidence            999999999998654 3689999999999998  599      99999999999877554

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=2e-77  Score=623.82  Aligned_cols=347  Identities=44%  Similarity=0.781  Sum_probs=310.0

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCCCCC
Q 010330           45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTS  124 (513)
Q Consensus        45 d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~~~~  124 (513)
                      |||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+|+.+|+.||+||++++.++.++++++.
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~   80 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF   80 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence            79999999999999999999999999999999987789999999999999999999999999999988764221101110


Q ss_pred             C-----C-CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCC
Q 010330          125 Q-----G-VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCG  198 (513)
Q Consensus       125 ~-----g-~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~  198 (513)
                      .     + .++.|+|++|||+.   +++ + .     .....+.++.|+.++|.|||||+|+|+++++.+++.+.|+.|+
T Consensus        81 ~~~~~~~~~~~~~~f~~~fg~~---~g~-~-~-----~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~  150 (354)
T TIGR02349        81 NGFDIGFFGDFGDIFGDFFGGG---GGS-G-R-----RRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCH  150 (354)
T ss_pred             CCccccCcCchhhhHHHHhccC---ccc-C-c-----cccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCC
Confidence            0     1 13457888888642   110 0 0     0112346789999999999999999999999999999999999


Q ss_pred             CCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCC
Q 010330          199 GTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA  278 (513)
Q Consensus       199 GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~  278 (513)
                      |+|........+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++...|..|.|.|++.+.+.++|.||+|+++|+
T Consensus       151 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  230 (354)
T TIGR02349       151 GTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQ  230 (354)
T ss_pred             CCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCC
Confidence            99999888889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEE
Q 010330          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVK  358 (513)
Q Consensus       279 ~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~  358 (513)
                      +|+|+|+|++...++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+||||.+.|.||+++++|++++
T Consensus       231 ~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~  310 (354)
T TIGR02349       231 RLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFR  310 (354)
T ss_pred             EEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCcEEE
Confidence            99999999987667789999999999999999999999999999999999999999999999988999999999999999


Q ss_pred             EccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhh
Q 010330          359 LQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFL  402 (513)
Q Consensus       359 l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~  402 (513)
                      |+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus       311 i~g~G~p~~~~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~  353 (354)
T TIGR02349       311 LKGKGVPRLRG-NGRGDLLVTVKVETPKNLSKEQKELLEELAEA  353 (354)
T ss_pred             ECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999997654 36899999999999999999999999999863

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-76  Score=620.63  Aligned_cols=347  Identities=34%  Similarity=0.636  Sum_probs=306.9

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCCCC
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNT  123 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~~~  123 (513)
                      .|||++|||+++||.+|||+|||+||++||||+|++++|+++|++|++||++|+||.+|+.||+||+++..+..++++.+
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~   81 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFG   81 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccC
Confidence            59999999999999999999999999999999998888999999999999999999999999999987642211111112


Q ss_pred             CCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcc
Q 010330          124 SQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAK  203 (513)
Q Consensus       124 ~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~  203 (513)
                      +.++|+.|+|+.|||+.  ++++ + .      ....+.++.|+.+.+.|||+|+|+|+++++.+.+...|+.|+|+|..
T Consensus        82 ~~~~d~~d~f~~~fg~~--~~~~-~-~------~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~  151 (371)
T PRK14292         82 GMGFDPMDIFEQLFGGA--GFGG-G-R------GRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTE  151 (371)
T ss_pred             ccCCChHHHHHHhhCCC--CcCC-C-C------CcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccC
Confidence            22356778999999642  1111 0 0      01124578999999999999999999999999999999999999998


Q ss_pred             ccc-ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEE
Q 010330          204 SSN-CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI  282 (513)
Q Consensus       204 ~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl  282 (513)
                      ... ...+|+.|+|+|.++..+++.+|++++..+|+.|+|.|+.+...|..|.|.|++.+.++++|.||+|+.+|++|+|
T Consensus       152 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  231 (371)
T PRK14292        152 PGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRV  231 (371)
T ss_pred             CCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEE
Confidence            664 4789999999999998888888999988999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEEccC
Q 010330          283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQM  362 (513)
Q Consensus       283 ~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l~g~  362 (513)
                      +|+|++...+ . |||||+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+||||+..|+||+|+++|++++|+|+
T Consensus       232 ~G~G~~~~~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~  309 (371)
T PRK14292        232 AGMGNEGPGG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQ  309 (371)
T ss_pred             ecCcCCCCCC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcEEEECCC
Confidence            9999986443 3 9999999999999999999999999999999999999999999999888999999999999999999


Q ss_pred             CCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          363 GVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       363 G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      |||..++ ..+|||||+|+|.+|+.|+++|+++|++|++..
T Consensus       310 G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~  349 (371)
T PRK14292        310 GMPRLQG-AGTGDLIVEYEIAVPKQLSPEAREALEAYARAV  349 (371)
T ss_pred             CCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9997654 358999999999999999999999999998653

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-76  Score=621.15  Aligned_cols=354  Identities=45%  Similarity=0.837  Sum_probs=312.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~~  122 (513)
                      ..|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|++||+||++++.++.+.++.
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~   81 (374)
T PRK14293          2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDM   81 (374)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCc
Confidence            37999999999999999999999999999999999988899999999999999999999999999999877532110010


Q ss_pred             CCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCc
Q 010330          123 TSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGA  202 (513)
Q Consensus       123 ~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~  202 (513)
                      +.. .++.|+|++||+++++ ++  + .+ ... ....+.++.|+.+.|.|||||+|+|+++++.+++.+.|+.|+|+|.
T Consensus        82 ~~~-~~~~d~f~~~fg~~~~-~~--~-~~-~~~-~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~  154 (374)
T PRK14293         82 GDM-GGFADIFETFFSGFGG-AG--G-QG-GRR-RRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGA  154 (374)
T ss_pred             ccc-cchHHHHHHHhcccCC-CC--C-CC-ccc-cccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCC
Confidence            101 1234788889864211 11  0 00 000 0122457899999999999999999999999999999999999999


Q ss_pred             ccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEE
Q 010330          203 KSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI  282 (513)
Q Consensus       203 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl  282 (513)
                      ........|+.|+|+|.++..+++++|++++..+|+.|+|.|+++...|..|.|.|++.+.++++|.||||+++|++|+|
T Consensus       155 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l  234 (374)
T PRK14293        155 KPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRV  234 (374)
T ss_pred             CCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEE
Confidence            98888899999999999998889999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEEccC
Q 010330          283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQM  362 (513)
Q Consensus       283 ~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l~g~  362 (513)
                      +|+|++..+++.+|||||+|++++|+.|+|+|+||+++++|+|.||++|+++.|+||||+++|+||+++++|++++|+|+
T Consensus       235 ~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~  314 (374)
T PRK14293        235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENK  314 (374)
T ss_pred             ccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCC
Confidence            99999876667789999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             CCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          363 GVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       363 G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      |||..+.++.+|||||+|+|.||+.|+++|+++|++|+++.
T Consensus       315 G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~~  355 (374)
T PRK14293        315 GVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKIK  355 (374)
T ss_pred             CCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99986655568999999999999999999999999999764

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.1e-76  Score=614.38  Aligned_cols=351  Identities=34%  Similarity=0.645  Sum_probs=301.5

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~  121 (513)
                      +|||++|||+++||.+|||+|||+||++||||+|++.  .|+++|++|++||++|+|+.+|++||+||++++.++.++.+
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~   82 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN   82 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence            7999999999999999999999999999999999853  68999999999999999999999999999987753111000


Q ss_pred             CCC-C-CCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCC
Q 010330          122 NTS-Q-GVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (513)
Q Consensus       122 ~~~-~-g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~G  199 (513)
                      .++ . ..++.|+|+.|||+.   |++.. +++... ....+.++.|+.+.|.|||+|+|+|+++++.+.+.+.|+.|+|
T Consensus        83 ~~~~~~~~~~~d~f~~~fg~~---~~~~~-~~~~~~-~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G  157 (365)
T PRK14290         83 WDNFTHFSDINDIFNQIFGGN---FGSDF-FSGFGN-QQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSG  157 (365)
T ss_pred             ccccccccchhHHHHHHhcCc---ccccc-cccccc-ccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCcc
Confidence            000 0 125678899999642   11100 000000 0111234789999999999999999999999999999999999


Q ss_pred             CCcccccccccCcccCcccEEEEEeecCCcceee--eecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCC
Q 010330          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQ--VSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (513)
Q Consensus       200 tG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~--~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G  277 (513)
                      +|.... ...+|+.|+|+|.++..+.  +|++.+  ..+|+.|+|.|+++.+.|..|+|.|++.+.++++|.||||+.+|
T Consensus       158 ~g~~~~-~~~~C~~C~G~G~~~~~~~--~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G  234 (365)
T PRK14290        158 TGAKNG-KLITCPTCHGTGQQRIVRG--QGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDN  234 (365)
T ss_pred             ccCCCC-CCccCCCCCCcCEEEEEec--cCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCC
Confidence            999875 6789999999998876653  555543  57999999999999999999999999999999999999999999


Q ss_pred             CEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEE
Q 010330          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV  357 (513)
Q Consensus       278 ~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~  357 (513)
                      ++|+|+|+|+.  .++.+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|.++|+||+++++|+++
T Consensus       235 ~~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~i  312 (365)
T PRK14290        235 LRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVL  312 (365)
T ss_pred             cEEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEE
Confidence            99999999985  5788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhcCC
Q 010330          358 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKSP  405 (513)
Q Consensus       358 ~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~~~  405 (513)
                      +|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+.++..
T Consensus       313 ri~g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~~~~  359 (365)
T PRK14290        313 KIKGAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFDIKEN  359 (365)
T ss_pred             EECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhhhc
Confidence            999999997654 36899999999999999999999999999976654

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.8e-70  Score=554.77  Aligned_cols=329  Identities=36%  Similarity=0.663  Sum_probs=295.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~~  122 (513)
                      ++.||+||||+++||++|||+|||+||++||||+|++  +.++|++|++||||||||+||++||+||+++++++++++++
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g~   80 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGGF   80 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCCC
Confidence            5789999999999999999999999999999999975  88999999999999999999999999999999765432211


Q ss_pred             CCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCc
Q 010330          123 TSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGA  202 (513)
Q Consensus       123 ~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~  202 (513)
                             +. |++||+     |++.++         ..+.++.|+.+++.|||||+|.|.++++.+++..+|+.|+|+|.
T Consensus        81 -------~~-f~~~F~-----~g~~~~---------~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGg  138 (337)
T KOG0712|consen   81 -------GG-FSQFFG-----FGGNGG---------RGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGG  138 (337)
T ss_pred             -------cc-HHHhcc-----CCCcCc---------cccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCC
Confidence                   11 888885     222111         11234999999999999999999999999999999999999999


Q ss_pred             ccccccccCcccCcccEEEEEeecCCcceeee-ecCCCCCCCcEE--EeeeeeecCCceEEeeeeEEEEEcCCCCcCCCE
Q 010330          203 KSSNCIQSCKACWGRGGVLKTQRTPFGLISQV-STCSKCGGDGKI--IIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT  279 (513)
Q Consensus       203 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~-~~C~~C~G~G~~--i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~  279 (513)
                      .+.... .|+.|.|+|..+.+.+..+|+.++. ..|..|+|+|.+  ..+.|..|.|.+++...+.++|.|++|+.++++
T Consensus       139 ksg~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~k  217 (337)
T KOG0712|consen  139 KSGSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQK  217 (337)
T ss_pred             CCCCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccce
Confidence            887654 8999999999999999999998876 589999999998  456799999999999999999999999999999


Q ss_pred             EEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCC--CCCCCE
Q 010330          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSG--VQPGDT  356 (513)
Q Consensus       280 Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g--~qpG~~  356 (513)
                      |.+.|++++. .+..|||++|.|..++|+.|.|.|+||++..+|++.||++|+.+.+.||||+ +.+.++||  ++||++
T Consensus       218 i~f~geadea-~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~  296 (337)
T KOG0712|consen  218 ITFKGEADEA-PGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDT  296 (337)
T ss_pred             eeeeeeeeec-CCCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHE
Confidence            9999999986 4566999999999999999999999999999999999999999999999998 57888887  999999


Q ss_pred             EEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHH
Q 010330          357 VKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA  400 (513)
Q Consensus       357 ~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~  400 (513)
                      ++|+|+|||+.+++  +|||||+|+|+||+ +++++...|+.++
T Consensus       297 ~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l  337 (337)
T KOG0712|consen  297 KRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL  337 (337)
T ss_pred             EeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence            99999999999887  99999999999999 9999988888763

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-60  Score=484.46  Aligned_cols=276  Identities=38%  Similarity=0.660  Sum_probs=231.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC---
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG---  119 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~---  119 (513)
                      .+|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|+.||+||++++..+..+   
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~   82 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP   82 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence            47999999999999999999999999999999999888899999999999999999999999999999865432111   


Q ss_pred             --CC-CCCCC---CCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeee
Q 010330          120 --LS-NTSQG---VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFET  193 (513)
Q Consensus       120 --~~-~~~~g---~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~  193 (513)
                        ++ ++..+   .++.|+|++|||+. +++++   ++.........+.++.|+.+++.|||+|++.|+++++.+.    
T Consensus        83 ~~~~~~~~~~~~~~~~~d~f~~~fgg~-~~~~~---~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~----  154 (291)
T PRK14299         83 GPPGGGDFSGFNVGDFSDFFQQLFGGR-GGFGG---FGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA----  154 (291)
T ss_pred             CCCCCCCccccCcCCHHHHHHHHhCCC-CCCCC---cccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC----
Confidence              00 11111   24457889998642 11111   1100000012245789999999999999999999876541    


Q ss_pred             ccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCC
Q 010330          194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG  273 (513)
Q Consensus       194 C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~G  273 (513)
                                                                                           .++++|.||+|
T Consensus       155 ---------------------------------------------------------------------g~~~~V~Ip~G  165 (291)
T PRK14299        155 ---------------------------------------------------------------------GERLSVRIPPG  165 (291)
T ss_pred             ---------------------------------------------------------------------CEEEEEecCCC
Confidence                                                                                 14578999999


Q ss_pred             CcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCC
Q 010330          274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQP  353 (513)
Q Consensus       274 v~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qp  353 (513)
                      +++|++|+++|+|++.      |||||+|++++|+.|+|+|+||+++++|++.+|++|+++.|+||||++.|+||+++++
T Consensus       166 ~~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~  239 (291)
T PRK14299        166 VREGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQA  239 (291)
T ss_pred             cCCCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCC
Confidence            9999999999999862      9999999999999999999999999999999999999999999999989999999999


Q ss_pred             CCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          354 GDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       354 G~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      |++++|+|+|||..  ++.+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus       240 g~~~rl~g~G~p~~--~~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~~  287 (291)
T PRK14299        240 GRKLRLKGKGWPRG--PAGRGDQYAEVRITIPTRPTPEEERLYKQLAELY  287 (291)
T ss_pred             CCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhh
Confidence            99999999999963  3468999999999999999999999999998764

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=1.6e-58  Score=472.67  Aligned_cols=287  Identities=28%  Similarity=0.475  Sum_probs=238.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhccccccc----CCCcccc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA----GITGEYD  118 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~----g~~~~~~  118 (513)
                      .+|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+|+.+|+.||+||+.    ++.+...
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~   82 (306)
T PRK10266          3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ   82 (306)
T ss_pred             cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccccc
Confidence            379999999999999999999999999999999998888999999999999999999999999999864    2221111


Q ss_pred             CCCC-CCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCC
Q 010330          119 GLSN-TSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSC  197 (513)
Q Consensus       119 ~~~~-~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C  197 (513)
                      .+++ .....++.++|+.|||+.    ++..        ....+.++.|+.+++.|||+|+++|+.+++.+.+.+    |
T Consensus        83 ~~~~~~~~~~~~~~~f~~~~g~~----~~~~--------~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~----~  146 (306)
T PRK10266         83 HGDGQSFNAEDFDDIFSSIFGQH----ARQS--------RQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV----Y  146 (306)
T ss_pred             cCCCCCCCCCCHHHHHHHHhCCC----CCCC--------CCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc----c
Confidence            0011 011124557888888541    1100        011235789999999999999999999998886531    1


Q ss_pred             CCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCC
Q 010330          198 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (513)
Q Consensus       198 ~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G  277 (513)
                                       .|.|.+..                                      ...++++|.||+|+++|
T Consensus       147 -----------------~g~G~~~~--------------------------------------~~~~~~~V~Ip~G~~~G  171 (306)
T PRK10266        147 -----------------NAFGMIEQ--------------------------------------EIPKTLNVKIPAGVGNG  171 (306)
T ss_pred             -----------------cCCCeEEE--------------------------------------eeeEEEEEEECCCCcCC
Confidence                             12221100                                      11367999999999999


Q ss_pred             CEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEE
Q 010330          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV  357 (513)
Q Consensus       278 ~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~  357 (513)
                      ++|+++|+|++...+..+|||||+|++++|+.|+|+|+||+++++||+.+|++|+++.|+|++|++.|+||+++++|+++
T Consensus       172 ~~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~  251 (306)
T PRK10266        172 QRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRL  251 (306)
T ss_pred             cEEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEE
Confidence            99999999998766778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHhhc
Q 010330          358 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLK  403 (513)
Q Consensus       358 ~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~~~  403 (513)
                      +|+|+|||..+   .+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus       252 ri~g~G~p~~~---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~~  294 (306)
T PRK10266        252 RVKGKGLVSKK---QTGDLYAVLKIVMPPKPDEKTAALWQQLADAQ  294 (306)
T ss_pred             EECCCCCCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99999999642   58999999999999999999999999999863

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5e-44  Score=361.40  Aligned_cols=245  Identities=43%  Similarity=0.794  Sum_probs=220.3

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCCCCC
Q 010330           45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTS  124 (513)
Q Consensus        45 d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~~~~  124 (513)
                      |||+||||+++||.+|||+||++||++||||.|++++|.++|++|.+|||+|+|++||++||++|..+.         ++
T Consensus        44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~---------~~  114 (288)
T KOG0715|consen   44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH---------GE  114 (288)
T ss_pred             chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc---------cc
Confidence            999999999999999999999999999999999999999999999999999999999999999998761         11


Q ss_pred             CCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCccc
Q 010330          125 QGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKS  204 (513)
Q Consensus       125 ~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~  204 (513)
                      .+.+|+++|..+|++.                 ..+...+.++.+++.++|+||.+|+.+.+.+.....|.+|.|.|..+
T Consensus       115 ~~g~~~~~~~~~~~~~-----------------~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~  177 (288)
T KOG0715|consen  115 FGGNPFDVFLEFFGGK-----------------MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEE  177 (288)
T ss_pred             ccCCccchHHHhhccc-----------------ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCccc
Confidence            2238899999988540                 01224567888999999999999999999999999999999999999


Q ss_pred             ccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEcc
Q 010330          205 SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG  284 (513)
Q Consensus       205 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G  284 (513)
                      +.....|..|.|.|.+....+.+|.+.    +|..|+|.|.++.+.|..|.|.|.+...+.+.|.+|+|+.++.+|++.+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~f~~~----~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~  253 (288)
T KOG0715|consen  178 GAKRESCKTCSGRGLVSNPKEDPFILY----TCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAG  253 (288)
T ss_pred             ccccccchhhhCcccccccccCCccee----ecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEec
Confidence            999999999999998766555555443    9999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHH
Q 010330          285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTE  327 (513)
Q Consensus       285 ~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~e  327 (513)
                      .|..        ||+|.+.|.+++.|+|+|.|++++..|++++
T Consensus       254 ~~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  254 HGND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             CCcc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence            9864        9999999999999999999999999998764

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.3e-43  Score=355.08  Aligned_cols=313  Identities=32%  Similarity=0.463  Sum_probs=238.5

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC
Q 010330           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (513)
Q Consensus        41 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~  119 (513)
                      ...+|||++|||+++||.+|||+||||||+|||||+||+ |.|.++|++|+.||||||||++|+.||+||++++......
T Consensus        13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~   92 (336)
T KOG0713|consen   13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKD   92 (336)
T ss_pred             hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccccc
Confidence            346899999999999999999999999999999999995 8999999999999999999999999999999999854311


Q ss_pred             CCCCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCC
Q 010330          120 LSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (513)
Q Consensus       120 ~~~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~G  199 (513)
                      +.++..+   .++|+.||+..+..+++       .+. .....+|.++...++.++++.|.|...+..-.+.+.|. |.|
T Consensus        93 ~~~g~~~---~~~f~~~f~dfg~~~~g-------~~~-~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g  160 (336)
T KOG0713|consen   93 GEGGGGG---NDIFSAFFGDFGVTVGG-------NPL-EEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APG  160 (336)
T ss_pred             cccCCcc---cchHHHhhcccccccCC-------Ccc-cCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCc
Confidence            1111111   57788888654222221       111 12267899999999999999999986554444444433 221


Q ss_pred             CCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCE
Q 010330          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT  279 (513)
Q Consensus       200 tG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~  279 (513)
                      +-           .|+-.=. +..++...|.+++.+            ...|..|.+.+...+...+++.+..|...|..
T Consensus       161 ~~-----------~~~~~~~-~~~~~~~~g~~~~~q------------~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~  216 (336)
T KOG0713|consen  161 TR-----------KCNCRLE-MFTQQEGPGRFQMLQ------------EAVCDECPNVKLVLEEDPLEVEFERGDADGPE  216 (336)
T ss_pred             cc-----------ccCChhh-heeeccCCChhhhhh------------hhhhccCCccceeecCCceeeeeeecccCCce
Confidence            11           1111111 111222223332221            12244555566666789999999999999999


Q ss_pred             EEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEE
Q 010330          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVK  358 (513)
Q Consensus       280 Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~  358 (513)
                      ..+..+|.+. .-+.+||+++.+...+|+.|.|+++|+++.+.+++.+++.|+..++.++|+. +.++-..++-|+..++
T Consensus       217 ~~~~~~~~~h-~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~  295 (336)
T KOG0713|consen  217 EIFELEGEPH-IDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTR  295 (336)
T ss_pred             eeeeccCCcc-eecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhh
Confidence            9999998774 3578999999999999999999999999999999999999999999999997 3455556789999999


Q ss_pred             EccCCCCCCCCCCCCCcEEEEEEEEcCCC-CCh
Q 010330          359 LQQMGVPDINNPSVRGDHLFIVNVLIPKD-ISD  390 (513)
Q Consensus       359 l~g~G~P~~~~~~~rGDL~V~f~V~~P~~-ls~  390 (513)
                      ..++|||........|.++++|.+.+|.+ +++
T Consensus       296 ~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~  328 (336)
T KOG0713|consen  296 KKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD  328 (336)
T ss_pred             hhhccchhhhccchhcceeEEecccCcccccch
Confidence            99999998777778899999999999965 665

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=1.7e-41  Score=367.68  Aligned_cols=125  Identities=18%  Similarity=0.228  Sum_probs=113.7

Q ss_pred             EEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEec
Q 010330          259 EVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVET  338 (513)
Q Consensus       259 ~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~t  338 (513)
                      .+.+.++++|.||+|+++|++|+|+|+|+.+. ++ +|||||+|++++|+.|+|+|+|||++++|+|.+||||+++.|+|
T Consensus       692 tvkE~ktLeVkIPpGVkdGqkIRf~GeGDegp-gg-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpT  769 (871)
T TIGR03835       692 TTNEAITLEIQLPITSQLNISAIFKGFGHDFG-NG-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFG  769 (871)
T ss_pred             eeeeeEEEEEecCCCCCCCCEEEeccccCCCC-CC-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeC
Confidence            34556899999999999999999999999853 34 49999999999999999999999999999999999999999999


Q ss_pred             cCCcEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEE-cCCC
Q 010330          339 VEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVL-IPKD  387 (513)
Q Consensus       339 ldG~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~-~P~~  387 (513)
                      |||++.|+||++++||++++|+|+|||..+  +.||||||+|+|. ++++
T Consensus       770 LDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~~~k~  817 (871)
T TIGR03835       770 PNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSSVMKK  817 (871)
T ss_pred             CCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEeecccc
Confidence            999989999999999999999999999543  4699999999998 4543

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.90  E-value=5.5e-23  Score=206.02  Aligned_cols=264  Identities=32%  Similarity=0.476  Sum_probs=185.9

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHHhhccchhhhhcccccccCCCcccc-C
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD-G  119 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~-~  119 (513)
                      ..|||++|+|.++|+.+||++||++||++||||+|+.+  .++++|++|.+||++|+|+.+|+.||+||++++.+... .
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~   81 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS   81 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence            47999999999999999999999999999999999876  67778999999999999999999999999977665211 1


Q ss_pred             CC--CC---CCCCCcccccccccCCCCCCCCC------------------CCCCCCcccc----------CCCCCCCCcc
Q 010330          120 LS--NT---SQGVDPFELYSAFFGGSDGLFGG------------------VGEAGGINFN----------FGNKGNFGLD  166 (513)
Q Consensus       120 ~~--~~---~~g~d~~dlF~~fFgg~~g~fg~------------------~g~~g~~~~~----------~~~~~~~g~D  166 (513)
                      +.  .+   ....++.+.|..|||........                  .+......+.          ......+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (306)
T KOG0714|consen   82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP  161 (306)
T ss_pred             CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence            11  11   11224556777788633211100                  0000000000          0000111112


Q ss_pred             eeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEE
Q 010330          167 IRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKI  246 (513)
Q Consensus       167 i~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  246 (513)
                      +.+.+.+++++.+.|+.+...+.+...                                                     
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------  188 (306)
T KOG0714|consen  162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------------------  188 (306)
T ss_pred             ccCCcceeHHHhccccceeeecccccc-----------------------------------------------------
Confidence            333344456666666655544433211                                                     


Q ss_pred             EeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEE--EecC
Q 010330          247 IIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK--ISVD  324 (513)
Q Consensus       247 i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~--~~Is  324 (513)
                        ......    .......+.+.+.+++..|..+....+|+... +..|-++++.+..++|+.|.++++||...  ..|+
T Consensus       189 --~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s  261 (306)
T KOG0714|consen  189 --TSNGRE----GSSRSRYLSISIKPGWKEGTKITFPEEGDEEP-GILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEIS  261 (306)
T ss_pred             --cCCccc----ccCccceeEEeccCCcccccceeccccccccC-CcCcceeEEEEecCCcccccCCCccceecccceee
Confidence              000000    12235778999999999999999999998753 36788999999999999999999999999  9999


Q ss_pred             HHHHhcCCeeEEeccCCc-EEEEeC-CCCCCCCEEEEccCCCCC
Q 010330          325 YTEAILGTSMEVETVEGM-KDLRIP-SGVQPGDTVKLQQMGVPD  366 (513)
Q Consensus       325 l~eAllG~~v~V~tldG~-~~l~Ip-~g~qpG~~~~l~g~G~P~  366 (513)
                      +.+|++|....+++++|. ..+.+. .-+.++...+++++|+|.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  262 LKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             hhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence            999999999999999996 244444 568999999999999985

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.84  E-value=4.3e-21  Score=159.17  Aligned_cols=80  Identities=30%  Similarity=0.656  Sum_probs=70.6

Q ss_pred             cceEEEecCHHHHhcCCeeEEeccCC-cEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHH
Q 010330          316 NLFSKISVDYTEAILGTSMEVETVEG-MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERA  394 (513)
Q Consensus       316 DL~~~~~Isl~eAllG~~v~V~tldG-~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~  394 (513)
                      ||+++++|+++||++|+++.|+|+|| .+.|+||+++++|++++|+|+|||...+++.+|||||+|+|.||++||++|++
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~   80 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE   80 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence            79999999999999999999999999 68999999999999999999999998877789999999999999999999987


Q ss_pred             H
Q 010330          395 L  395 (513)
Q Consensus       395 l  395 (513)
                      |
T Consensus        81 l   81 (81)
T PF01556_consen   81 L   81 (81)
T ss_dssp             H
T ss_pred             C
Confidence            6

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.77  E-value=2.3e-19  Score=199.89  Aligned_cols=78  Identities=38%  Similarity=0.644  Sum_probs=72.4

Q ss_pred             cccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330           38 MIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (513)
Q Consensus        38 ~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~  115 (513)
                      ..++.+++||++|||+++||..|||+|||+||++||||+|+++.|.++|++|++||+|||||.+|+.||+||.+|+..
T Consensus       567 t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~  644 (1136)
T PTZ00341        567 TIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG  644 (1136)
T ss_pred             cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence            445578999999999999999999999999999999999987778999999999999999999999999999987653

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=3.4e-19  Score=174.44  Aligned_cols=72  Identities=54%  Similarity=0.885  Sum_probs=68.8

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~  114 (513)
                      ..|+|+|||++++|+.++||||||+||++||||++++ |++.++|++||+||+||+|+.+|..||.||+.++.
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            5799999999999999999999999999999999987 88999999999999999999999999999987764

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.75  E-value=6.9e-18  Score=161.52  Aligned_cols=70  Identities=59%  Similarity=0.882  Sum_probs=64.9

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--hHHHHHHHHHHHHhhccchhhhhccccc
Q 010330           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--AEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~--a~~~f~~i~~AyevL~d~~kR~~YD~~G  109 (513)
                      +....|||+||||+++|+.+||++|||++|++||||+|+...  ++++|++|++||++|+|+.+|+.||+++
T Consensus         2 ~~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~   73 (237)
T COG2214           2 MSDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG   73 (237)
T ss_pred             chhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence            345689999999999999999999999999999999998543  8999999999999999999999999984

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=7.2e-19  Score=177.39  Aligned_cols=91  Identities=45%  Similarity=0.736  Sum_probs=79.2

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccC
Q 010330           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (513)
Q Consensus        41 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~  119 (513)
                      ..+.|||++|||+.+||.+||++|||+.|++||||+|| +|.|.++|+.+.+||+||+|+.+|+.||++|..+....   
T Consensus         2 ~~~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~---   78 (296)
T KOG0691|consen    2 VKDTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ---   78 (296)
T ss_pred             cccchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch---
Confidence            34689999999999999999999999999999999999 58899999999999999999999999999998765432   


Q ss_pred             CCCCCCCCCcccccccccCC
Q 010330          120 LSNTSQGVDPFELYSAFFGG  139 (513)
Q Consensus       120 ~~~~~~g~d~~dlF~~fFgg  139 (513)
                           ...++.+.|...|++
T Consensus        79 -----~~~d~~~~~r~~f~~   93 (296)
T KOG0691|consen   79 -----GREDQADGFRKKFGS   93 (296)
T ss_pred             -----hhhhHHHHHHHHhhh
Confidence                 123677778777753

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=2.8e-18  Score=177.85  Aligned_cols=72  Identities=50%  Similarity=0.899  Sum_probs=68.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~----~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~  114 (513)
                      +.|||.+|+|+++||.+|||+|||++++.||||+..+|    .|++.|+.|.+|||||+||.+|++||.||+.|++
T Consensus         8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            46999999999999999999999999999999997653    5899999999999999999999999999999998

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.69  E-value=2.2e-17  Score=130.35  Aligned_cols=62  Identities=48%  Similarity=0.817  Sum_probs=59.1

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--hHHHHHHHHHHHHhhccchhhhhcc
Q 010330           45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--AEEKFKEISSAYEVLSDDEKRSVYD  106 (513)
Q Consensus        45 d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~--a~~~f~~i~~AyevL~d~~kR~~YD  106 (513)
                      |||+||||+++|+.+|||+||+++++++|||+++...  +++.|+.|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999987654  8899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.68  E-value=1.4e-17  Score=172.65  Aligned_cols=75  Identities=44%  Similarity=0.677  Sum_probs=68.6

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHHhhccchhhhhcccccccCCCcc
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE  116 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~  116 (513)
                      +.+.||++|||.++|+..|||++||+||++||||+||+  .+|.++|+.|+.||+|||||..|+-||..-+.-|.+.
T Consensus         6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~   82 (508)
T KOG0717|consen    6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGK   82 (508)
T ss_pred             hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCC
Confidence            34799999999999999999999999999999999986  5789999999999999999999999999887666543

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.66  E-value=9.6e-17  Score=161.77  Aligned_cols=75  Identities=48%  Similarity=0.736  Sum_probs=67.1

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC----cchHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS----PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~----~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~  115 (513)
                      .+..+|||+||||.++|+..||-||||+||.|||||.-.+    ..|+++|-.|..|-|||+||++|++||+ |++.+..
T Consensus       390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD~  468 (504)
T KOG0624|consen  390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLDP  468 (504)
T ss_pred             HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCCh
Confidence            3456899999999999999999999999999999998765    3589999999999999999999999998 6666654

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=5.5e-17  Score=155.47  Aligned_cols=69  Identities=46%  Similarity=0.763  Sum_probs=64.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC---cchHHHHHHHHHHHHhhccchhhhhccccccc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS---PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~---~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~  111 (513)
                      .+|+|+||||.++|+.+||++||++||++||||++++   .++.++|+.++.||.||+|+++|+.||+.|.-
T Consensus        13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i   84 (264)
T KOG0719|consen   13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI   84 (264)
T ss_pred             ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence            4699999999999999999999999999999999973   46899999999999999999999999998854

>PHA03102 Small T antigen; Reviewed

Probab=99.65  E-value=8.9e-17  Score=147.88  Aligned_cols=84  Identities=24%  Similarity=0.318  Sum_probs=72.1

Q ss_pred             cCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330           44 TDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (513)
Q Consensus        44 ~d~Y~iLgv~~~a--s~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~  121 (513)
                      ..+|++|||+++|  |.+|||+|||++|+++|||+++   .+++|++|++||++|+|+.+|+.||.+|........    
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg---~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~~----   77 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG---DEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEEE----   77 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc---hhHHHHHHHHHHHHHhhHHHhccccccCCccccccc----
Confidence            5789999999999  9999999999999999999974   458999999999999999999999999977644321    


Q ss_pred             CCCCCCCcccccccccCC
Q 010330          122 NTSQGVDPFELYSAFFGG  139 (513)
Q Consensus       122 ~~~~g~d~~dlF~~fFgg  139 (513)
                           ..|.++|...||+
T Consensus        78 -----~~~~~~f~~~fg~   90 (153)
T PHA03102         78 -----DVPSGYVGATFGD   90 (153)
T ss_pred             -----ccHHHHhhhhcCC
Confidence                 1367788877754

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.59  E-value=1.8e-15  Score=117.63  Aligned_cols=58  Identities=67%  Similarity=0.969  Sum_probs=54.1

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC--CcchHHHHHHHHHHHHhhccchh
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK--SPGAEEKFKEISSAYEVLSDDEK  101 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~--~~~a~~~f~~i~~AyevL~d~~k  101 (513)
                      +|||++|||+++++.++||+||++|++++|||+++  .+.+.+.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999999997  46789999999999999999853

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.56  E-value=3.1e-15  Score=142.42  Aligned_cols=71  Identities=37%  Similarity=0.657  Sum_probs=66.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI  113 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~  113 (513)
                      ..|+|+||||+++||.+|||+|||+|.+|||||++++ .+.++.|..|+.||+.|+|+..|..|..||+...
T Consensus        98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG  169 (230)
T KOG0721|consen   98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG  169 (230)
T ss_pred             cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence            4799999999999999999999999999999999987 5678889999999999999999999999997643

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.56  E-value=5.5e-15  Score=112.71  Aligned_cols=54  Identities=67%  Similarity=0.987  Sum_probs=51.4

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhcc
Q 010330           45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSD   98 (513)
Q Consensus        45 d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d   98 (513)
                      |||++|||+++++.++||++||+|+++||||+++. +.+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            79999999999999999999999999999999976 6789999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.54  E-value=4.4e-15  Score=152.93  Aligned_cols=94  Identities=39%  Similarity=0.640  Sum_probs=78.3

Q ss_pred             ccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330           37 GMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (513)
Q Consensus        37 ~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~  114 (513)
                      .+.++..+|||.|||+.++|+..|||+|||++|+.||||+|..  .+++.+|+++-+||.+|+||.+|..||.-- . +.
T Consensus       366 aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~-d-le  443 (486)
T KOG0550|consen  366 ALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQ-D-LE  443 (486)
T ss_pred             HHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccccc-c-hh
Confidence            4456778999999999999999999999999999999999863  578999999999999999999999999722 1 11


Q ss_pred             ccccCCCCCCCCCCcccccccc
Q 010330          115 GEYDGLSNTSQGVDPFELYSAF  136 (513)
Q Consensus       115 ~~~~~~~~~~~g~d~~dlF~~f  136 (513)
                      ..    +.++.++||+++|..|
T Consensus       444 ~~----~~~~a~~dp~~~~~a~  461 (486)
T KOG0550|consen  444 EV----GSGGAGFDPFNIFRAF  461 (486)
T ss_pred             hh----cCCCcCcChhhhhhhc
Confidence            11    1122578999999888

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.48  E-value=3.5e-13  Score=141.92  Aligned_cols=67  Identities=27%  Similarity=0.508  Sum_probs=55.3

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEE
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~  321 (513)
                      ++...++. ...++|.||+|+++|++++|+|+|++...++.+|||||+|+|..|+.+.+++.+|+.++
T Consensus       278 G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l  345 (371)
T PRK10767        278 GGEIEVPTLDGRVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF  345 (371)
T ss_pred             CCeEEEecCCCcEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            44444433 34689999999999999999999998655556899999999999999999998887654

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.46  E-value=7.1e-14  Score=111.49  Aligned_cols=65  Identities=48%  Similarity=0.999  Sum_probs=55.3

Q ss_pred             ccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEE-eeeeeecCCce
Q 010330          194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII-IDHCRRCGGNG  258 (513)
Q Consensus       194 C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i-~~~C~~C~G~G  258 (513)
                      |+.|+|+|++++..+.+|+.|+|+|+++..++++++++++..+|+.|+|+|++| .++|+.|+|.|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence            899999999999999999999999999999998999999999999999999999 99999999975

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.46  E-value=1e-13  Score=143.48  Aligned_cols=119  Identities=30%  Similarity=0.659  Sum_probs=93.0

Q ss_pred             eeeeccCCCCCCccccc-------ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeee------------
Q 010330          190 CFETCDSCGGTGAKSSN-------CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDH------------  250 (513)
Q Consensus       190 r~~~C~~C~GtG~~~~~-------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~------------  250 (513)
                      ...+|++|+|+|.....       ...+|+.|+|+|.++.            .+|+.|+|.|.+....            
T Consensus       158 ~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~------------~pC~~C~G~G~v~~~~~i~V~IPaGv~~  225 (371)
T COG0484         158 DPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIK------------DPCGKCKGKGRVKKKKSISVNIPAGVDD  225 (371)
T ss_pred             CCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECC------------CCCCCCCCCCeEeeeeEEEEECCCCCcc
Confidence            56799999999975432       3579999999999864            5799999999965431            


Q ss_pred             ------------------------------------------ee--------ecCCceEEee-eeEEEEEcCCCCcCCCE
Q 010330          251 ------------------------------------------CR--------RCGGNGEVQS-KRSMKVVIPPGVSNGAT  279 (513)
Q Consensus       251 ------------------------------------------C~--------~C~G~G~v~~-~k~l~V~IP~Gv~~G~~  279 (513)
                                                                |.        .+++.-.|++ ...++|+||+|++.|++
T Consensus       226 g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~~  305 (371)
T COG0484         226 GDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEV  305 (371)
T ss_pred             CCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCcE
Confidence                                                      11        1255555554 34599999999999999


Q ss_pred             EEEccccccCCCCCCCccEEEEEEEeeccccccccccceEE
Q 010330          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (513)
Q Consensus       280 Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~  320 (513)
                      ++|+|+|++..++...|||||+|+|.-+..+......|+.+
T Consensus       306 ~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~~lL~~  346 (371)
T COG0484         306 FRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQKELLEE  346 (371)
T ss_pred             EEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHHHHHHH
Confidence            99999999987777789999999999999877665555543

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.41  E-value=7.4e-14  Score=135.38  Aligned_cols=67  Identities=40%  Similarity=0.718  Sum_probs=63.7

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccc
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRF  108 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~  108 (513)
                      ...|.|++|||+++|+..||++|||+||++||||+++++++.+.|..|..|||+|.|.+.|+.||-+
T Consensus        31 G~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   31 GAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             cchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHH
Confidence            3479999999999999999999999999999999999988999999999999999999999999963

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=1e-12  Score=138.23  Aligned_cols=67  Identities=27%  Similarity=0.476  Sum_probs=55.9

Q ss_pred             CCceEEee--eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEE
Q 010330          255 GGNGEVQS--KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (513)
Q Consensus       255 ~G~G~v~~--~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~  321 (513)
                      ++...++.  .+.++|.||+|+++|++++|+|+|++...++.+|||||+|+|..|+.|.+++.+|+.++
T Consensus       292 G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l  360 (369)
T PRK14282        292 GTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKEL  360 (369)
T ss_pred             CCEEEEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            44555554  35799999999999999999999998644456899999999999999999999887653

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.36  E-value=9.1e-13  Score=124.31  Aligned_cols=64  Identities=27%  Similarity=0.444  Sum_probs=56.9

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHHhhccchhhhhccc
Q 010330           44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        44 ~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~~------~a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      .|||++|||++.  ++..+|+++||+|+++||||+....      .+.+.|..|++||++|+||.+|+.|+.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL   72 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence            489999999996  7889999999999999999997532      156689999999999999999999984

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.34  E-value=9.7e-13  Score=123.48  Aligned_cols=64  Identities=30%  Similarity=0.450  Sum_probs=56.5

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCc----chHHHHHHHHHHHHhhccchhhhhccc
Q 010330           44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        44 ~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~~----~a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      .|||++|||++.  ++..+|+++||+|+++||||++...    .+.+.+..|++||++|+||.+|+.|+.
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL   71 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML   71 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            599999999997  7899999999999999999998642    133457899999999999999999975

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.34  E-value=6e-13  Score=138.63  Aligned_cols=65  Identities=42%  Similarity=0.600  Sum_probs=63.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhccc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      .+|.|.+|||+.++|+++|||.|||+|+..|||+|..+.|+|.|+.++.|||+|+|+++|+.||+
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~  298 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDL  298 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999997

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.34  E-value=2.4e-12  Score=135.37  Aligned_cols=120  Identities=26%  Similarity=0.605  Sum_probs=91.2

Q ss_pred             eeeeccCCCCCCccccc---------ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeee----------
Q 010330          190 CFETCDSCGGTGAKSSN---------CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDH----------  250 (513)
Q Consensus       190 r~~~C~~C~GtG~~~~~---------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~----------  250 (513)
                      ....|+.|+|+|.....         ...+|+.|+|.|.++.            ..|+.|+|.|.+....          
T Consensus       164 ~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~  231 (365)
T PRK14290        164 KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPE------------EKCPRCNGTGTVVVNEDISVKIPKGA  231 (365)
T ss_pred             CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEcc------------CCCCCCCCceeEEEeeEEEEEECCCC
Confidence            34679999999864221         2367999999997643            5699998888764420          


Q ss_pred             --------------------------------------------------eeecCCceEEee-eeEEEEEcCCCCcCCCE
Q 010330          251 --------------------------------------------------CRRCGGNGEVQS-KRSMKVVIPPGVSNGAT  279 (513)
Q Consensus       251 --------------------------------------------------C~~C~G~G~v~~-~k~l~V~IP~Gv~~G~~  279 (513)
                                                                        -..|++...++. ...++|.||+|+++|++
T Consensus       232 ~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~  311 (365)
T PRK14290        232 TDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEV  311 (365)
T ss_pred             CCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcE
Confidence                                                              012355555554 35799999999999999


Q ss_pred             EEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEE
Q 010330          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (513)
Q Consensus       280 Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~  321 (513)
                      ++|+|+|++...+..+|||||+|+|..|+.|++++.+|+.++
T Consensus       312 iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        312 LKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             EEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            999999998655556899999999999999999999888664

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.32  E-value=2.7e-12  Score=135.35  Aligned_cols=67  Identities=19%  Similarity=0.332  Sum_probs=55.4

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEE
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~  321 (513)
                      ++...++. ...++|.||+|+++|++++|+|+|++...+...|||||+|+|..|+.+++++.+|+.++
T Consensus       281 G~~~~i~tldG~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        281 GADIMVPTLYGKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             CCeEEEecCCCCEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            55555544 34589999999999999999999998655556899999999999999999888877654

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=3.2e-12  Score=134.44  Aligned_cols=68  Identities=21%  Similarity=0.375  Sum_probs=55.9

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEe
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS  322 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~  322 (513)
                      ++...+.. ...++|.||+|+++|++++|+|+|++...+..+|||||+|+|..|+.|.++..+|+..+.
T Consensus       280 G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~  348 (366)
T PRK14294        280 GAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFA  348 (366)
T ss_pred             CCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            55555554 345799999999999999999999986555568999999999999999998888776543

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.31  E-value=3.2e-12  Score=120.65  Aligned_cols=66  Identities=26%  Similarity=0.411  Sum_probs=58.7

Q ss_pred             cccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHHhhccchhhhhccc
Q 010330           42 AGTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~~------~a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      ...|||++|||++.  .+..+|+++||+|+++||||++...      .+.+.|..|++||++|+||.+|+.|+.
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL   75 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            45799999999998  6789999999999999999997642      256789999999999999999999995

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.30  E-value=5e-12  Score=132.90  Aligned_cols=66  Identities=20%  Similarity=0.427  Sum_probs=54.1

Q ss_pred             CCceEEee--eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEE
Q 010330          255 GGNGEVQS--KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (513)
Q Consensus       255 ~G~G~v~~--~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~  320 (513)
                      ++.-.+..  .+.++|.||+|+++|++++|+|+|++...+...|||||+|+|..|+.|.+++..|+.+
T Consensus       282 G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~  349 (365)
T PRK14285        282 GKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLEN  349 (365)
T ss_pred             CCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            55555554  3579999999999999999999999865444579999999999999999888766544

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.29  E-value=3.9e-12  Score=120.46  Aligned_cols=65  Identities=23%  Similarity=0.310  Sum_probs=56.6

Q ss_pred             ccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCC-cch-----HHHHHHHHHHHHhhccchhhhhccc
Q 010330           43 GTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKS-PGA-----EEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        43 ~~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~-~~a-----~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      ..|||++|||++.  ++..+|+++||+|++++|||+++. +.+     .+.+..||+||++|+||.+|+.|+.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            4799999999996  689999999999999999999863 332     3346899999999999999999994

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.25  E-value=5.2e-12  Score=110.87  Aligned_cols=52  Identities=23%  Similarity=0.410  Sum_probs=48.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS   97 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~   97 (513)
                      ..++|++|||+++||.+|||+|||+|++++|||++   ++.+.|++|++|||+|.
T Consensus        64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---Gs~~~~~kIneAyevL~  115 (116)
T PTZ00100         64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNG---GSTYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHh
Confidence            37999999999999999999999999999999985   46688999999999985

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=1.1e-11  Score=130.76  Aligned_cols=66  Identities=26%  Similarity=0.403  Sum_probs=52.5

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEE
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~  320 (513)
                      ++...++. ...++|.||+|+++|++++|+|+|++...+..+|||||+|+|..|+.+..+..+++..
T Consensus       280 G~~~~v~tldG~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l~~  346 (373)
T PRK14301        280 GDRIEVPTLDDPVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLRE  346 (373)
T ss_pred             CCeEEEecCCccEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            55555544 3459999999999999999999999865555689999999999998877666555443

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=1.6e-11  Score=129.52  Aligned_cols=63  Identities=27%  Similarity=0.555  Sum_probs=50.2

Q ss_pred             CCceEEee--eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccc
Q 010330          255 GGNGEVQS--KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNL  317 (513)
Q Consensus       255 ~G~G~v~~--~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL  317 (513)
                      ++...++.  .+.++|.||+|+++|++++|+|+|++...+..+|||||+|+|..|..+.-+...|
T Consensus       281 G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~qk~~  345 (372)
T PRK14300        281 GGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQREL  345 (372)
T ss_pred             CCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            45555555  3589999999999999999999999865556789999999999998765444333

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.24  E-value=1.4e-11  Score=130.74  Aligned_cols=66  Identities=24%  Similarity=0.497  Sum_probs=53.4

Q ss_pred             CCceEEee-e--eEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEE
Q 010330          255 GGNGEVQS-K--RSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (513)
Q Consensus       255 ~G~G~v~~-~--k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~  320 (513)
                      ++...++. .  ..++|.||+|+++|++++|+|+|++...+..+|||||+|+|..|+.+..+..+|+..
T Consensus       294 G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~  362 (391)
T PRK14284        294 GMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLRQ  362 (391)
T ss_pred             CCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHH
Confidence            55555653 2  689999999999999999999999865555689999999999998887766665543

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.24  E-value=1.3e-11  Score=130.15  Aligned_cols=66  Identities=24%  Similarity=0.420  Sum_probs=53.1

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEE
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~  320 (513)
                      ++...+.. ...++|.||+|+++|++++|+|+|++...++..|||||+|+|..|+.+.++...|+.+
T Consensus       278 G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~  344 (371)
T PRK14287        278 GDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMRE  344 (371)
T ss_pred             CCEEEEEcCCCCEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHH
Confidence            55555554 3458999999999999999999999865555689999999999999888776655544

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.22  E-value=2.5e-11  Score=128.18  Aligned_cols=60  Identities=25%  Similarity=0.448  Sum_probs=48.4

Q ss_pred             CCceEEee--eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeecccccccc
Q 010330          255 GGNGEVQS--KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDG  314 (513)
Q Consensus       255 ~G~G~v~~--~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G  314 (513)
                      ++...++.  ...++|.||+|+++|++++|+|+|++...++..|||||+|+|.-+..+..+.
T Consensus       279 G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls~~q  340 (378)
T PRK14278        279 GTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHED  340 (378)
T ss_pred             CCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHH
Confidence            55555654  4689999999999999999999999865555689999999999777554433

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.22  E-value=1.4e-11  Score=129.08  Aligned_cols=64  Identities=28%  Similarity=0.555  Sum_probs=51.1

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccce
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLF  318 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~  318 (513)
                      ++...++. ...++|.||+|+++|++++|+|+|++...+..+|||||+|+|..|+.+.++..+++
T Consensus       283 G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l  347 (354)
T TIGR02349       283 GGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELL  347 (354)
T ss_pred             CCeEEEecCCceEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            34444433 34689999999999999999999998655557899999999999998887766554

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=2.3e-11  Score=128.57  Aligned_cols=61  Identities=23%  Similarity=0.409  Sum_probs=48.2

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccc
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGL  315 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~  315 (513)
                      ++...++. ...++|.||+|+++|++++|+|+|++...+..+|||||+|+|..+..+..+..
T Consensus       286 G~~~~v~tldg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~  347 (380)
T PRK14276        286 GDTVEVPTVHGDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQK  347 (380)
T ss_pred             CCeEEEEcCCCcEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHH
Confidence            55555554 34589999999999999999999998655556899999999998876554443

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.20  E-value=3.1e-11  Score=127.08  Aligned_cols=116  Identities=29%  Similarity=0.547  Sum_probs=85.9

Q ss_pred             eeeeccCCCCCCcccc-----cccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeee--------------
Q 010330          190 CFETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDH--------------  250 (513)
Q Consensus       190 r~~~C~~C~GtG~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~--------------  250 (513)
                      ....|+.|+|+|....     ....+|+.|+|+|.++.            ..|+.|+|.|.+....              
T Consensus       155 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~  222 (369)
T PRK14288        155 ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIK------------TPCQACKGKTYILKDEEIDAIIPEGIDDQN  222 (369)
T ss_pred             CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEcc------------ccCccCCCcceEEEEEEEEEecCCCCCCCC
Confidence            4568999999996421     13458999999998753            4699999998764420              


Q ss_pred             -----------------------------------------------eeecCCceEEee--eeEEEEEcCCCCcCCCEEE
Q 010330          251 -----------------------------------------------CRRCGGNGEVQS--KRSMKVVIPPGVSNGATMQ  281 (513)
Q Consensus       251 -----------------------------------------------C~~C~G~G~v~~--~k~l~V~IP~Gv~~G~~Ir  281 (513)
                                                                     -..|++.-.++.  .+.++|.||+|+++|++++
T Consensus       223 ~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~  302 (369)
T PRK14288        223 RMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA  302 (369)
T ss_pred             EEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence                                                           112355555554  3468999999999999999


Q ss_pred             EccccccCCCCCCCccEEEEEEEeeccccccccccc
Q 010330          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNL  317 (513)
Q Consensus       282 l~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL  317 (513)
                      |+|+|++...+...|||||+|+|..|+.+..+...+
T Consensus       303 i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~  338 (369)
T PRK14288        303 FRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQEL  338 (369)
T ss_pred             EcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            999999864434569999999999998876555443

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.19  E-value=3.5e-11  Score=127.87  Aligned_cols=113  Identities=29%  Similarity=0.502  Sum_probs=82.7

Q ss_pred             eeeeccCCCCCCccccc---------ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeee----------
Q 010330          190 CFETCDSCGGTGAKSSN---------CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDH----------  250 (513)
Q Consensus       190 r~~~C~~C~GtG~~~~~---------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~----------  250 (513)
                      ....|+.|+|+|.....         ...+|+.|+|+|.++.            ..|+.|+|.|.+....          
T Consensus       178 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~  245 (397)
T PRK14281        178 ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVK------------DRCPACYGEGIKQGEVTVKVTVPAGV  245 (397)
T ss_pred             CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeC------------CCCCCCCCCccEecceEEEEecCCCC
Confidence            34679999999865321         2457999999998753            4699999988764320          


Q ss_pred             ----------------------------------------------------eeecCCceEEee-eeEEEEEcCCCCcCC
Q 010330          251 ----------------------------------------------------CRRCGGNGEVQS-KRSMKVVIPPGVSNG  277 (513)
Q Consensus       251 ----------------------------------------------------C~~C~G~G~v~~-~k~l~V~IP~Gv~~G  277 (513)
                                                                          -..|++...+.. ...++|.||+|+++|
T Consensus       246 ~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~G  325 (397)
T PRK14281        246 QDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPE  325 (397)
T ss_pred             CCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCCccCCC
Confidence                                                                012255555554 345899999999999


Q ss_pred             CEEEEccccccCCCCCCCccEEEEEEEeecccccccc
Q 010330          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDG  314 (513)
Q Consensus       278 ~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G  314 (513)
                      ++++|+|+|++...+...|||||+|+|.-+..+..+.
T Consensus       326 ~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~q  362 (397)
T PRK14281        326 TMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQD  362 (397)
T ss_pred             cEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHH
Confidence            9999999999865555689999999999877654433

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.19  E-value=4.2e-11  Score=127.03  Aligned_cols=112  Identities=27%  Similarity=0.575  Sum_probs=81.9

Q ss_pred             eeeeccCCCCCCccccc-----ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeee--------------
Q 010330          190 CFETCDSCGGTGAKSSN-----CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDH--------------  250 (513)
Q Consensus       190 r~~~C~~C~GtG~~~~~-----~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~--------------  250 (513)
                      ....|+.|+|+|.....     ...+|+.|+|+|.++.            ..|+.|+|.|.+....              
T Consensus       189 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~  256 (392)
T PRK14279        189 SPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIE------------DPCEECKGTGVTTRTRTINVRIPPGVEDGQ  256 (392)
T ss_pred             CCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeC------------CcCCCCCCCeEEEEeeeeEEEeCCCCCCCc
Confidence            34679999999875321     3468999999998753            4699999988764320              


Q ss_pred             ------------------------------------------------eeecCCceEEee-eeEEEEEcCCCCcCCCEEE
Q 010330          251 ------------------------------------------------CRRCGGNGEVQS-KRSMKVVIPPGVSNGATMQ  281 (513)
Q Consensus       251 ------------------------------------------------C~~C~G~G~v~~-~k~l~V~IP~Gv~~G~~Ir  281 (513)
                                                                      -..|++...++. ...++|+||+|+++|++|+
T Consensus       257 ~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip~g~~~g~~ir  336 (392)
T PRK14279        257 RIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAGTADGRILR  336 (392)
T ss_pred             EEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEECCCCCCCCEEE
Confidence                                                            001244444443 3458999999999999999


Q ss_pred             EccccccCCCCCCCccEEEEEEEeecccccccc
Q 010330          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDG  314 (513)
Q Consensus       282 l~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G  314 (513)
                      |+|+|++. .++.+|||||+|+|.-+..+..+.
T Consensus       337 i~g~G~p~-~~~~~GDL~I~~~v~~P~~Ls~~q  368 (392)
T PRK14279        337 VRGRGVPK-RSGGAGDLLVTVKVAVPPNLDGAA  368 (392)
T ss_pred             ECCCCCCC-CCCCCCCEEEEEEEECCCCCCHHH
Confidence            99999985 345689999999999887654443

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.18  E-value=4.3e-11  Score=126.13  Aligned_cols=64  Identities=25%  Similarity=0.378  Sum_probs=49.9

Q ss_pred             CCceEEee--eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccce
Q 010330          255 GGNGEVQS--KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLF  318 (513)
Q Consensus       255 ~G~G~v~~--~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~  318 (513)
                      ++...++.  .+.++|.||+|+++|++++|+|+|++...+...|||||+|+|.-+..+..+..+|+
T Consensus       286 G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l  351 (372)
T PRK14286        286 GAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRELI  351 (372)
T ss_pred             CCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHH
Confidence            44545544  45799999999999999999999998655556799999999998887665554443

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.18  E-value=4.8e-11  Score=126.02  Aligned_cols=61  Identities=25%  Similarity=0.411  Sum_probs=47.6

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccc
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGL  315 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~  315 (513)
                      ++...+.. ...++|.||+|+++|++++|+|+|++...+...|||||+|+|..+..+..+..
T Consensus       283 G~~~~i~tldg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls~~q~  344 (376)
T PRK14280        283 GDEIEVPTLHGKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQK  344 (376)
T ss_pred             CCEEEEecCCceEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
Confidence            55555553 34589999999999999999999998654556899999999998876554433

>PHA02624 large T antigen; Provisional

Probab=99.17  E-value=1.8e-11  Score=133.58  Aligned_cols=61  Identities=28%  Similarity=0.500  Sum_probs=57.1

Q ss_pred             ccCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcc
Q 010330           43 GTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYD  106 (513)
Q Consensus        43 ~~d~Y~iLgv~~~a--s~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD  106 (513)
                      ..++|++|||+++|  +.+|||+|||++|++||||++   +++++|++|++||++|+|+.+|+.|+
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---Gdeekfk~Ln~AYevL~d~~k~~r~~   72 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQEGVKSARQS   72 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CcHHHHHHHHHHHHHHhcHHHhhhcc
Confidence            46999999999999  999999999999999999997   45789999999999999999999993

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.16  E-value=2.2e-11  Score=122.79  Aligned_cols=58  Identities=40%  Similarity=0.527  Sum_probs=51.6

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--------cchHHHHHHHHHHHHhhccc
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--------PGAEEKFKEISSAYEVLSDD   99 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--------~~a~~~f~~i~~AyevL~d~   99 (513)
                      ...|+|++|||+++||.+|||+|||+|+++||||++..        +.++++|++|++||++|+..
T Consensus       198 ~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        198 TLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             cHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            34799999999999999999999999999999999642        34789999999999999853

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.16  E-value=5.3e-11  Score=125.58  Aligned_cols=68  Identities=19%  Similarity=0.343  Sum_probs=55.0

Q ss_pred             cCCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCC-CCCccEEEEEEEeeccccccccccceEEE
Q 010330          254 CGGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRR-SLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (513)
Q Consensus       254 C~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~g-g~~GDL~V~I~v~~h~~F~R~G~DL~~~~  321 (513)
                      |++.-.++. ...++|.||+|+++|++++|+|+|.+...+ +..|||||+|+|..|+.+.+++.+|+.++
T Consensus       282 ~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l  351 (374)
T PRK14293        282 LGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKL  351 (374)
T ss_pred             CCCEEEecCCCCCEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            356655654 335899999999999999999999985433 35799999999999999999888877554

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.16  E-value=6.8e-11  Score=125.03  Aligned_cols=60  Identities=20%  Similarity=0.385  Sum_probs=47.6

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeecccccccc
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDG  314 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G  314 (513)
                      ++...++. ...++|.||+|+++|++++|+|+|.+...++..|||||+|+|.-+..+..+.
T Consensus       288 G~~~~i~~ldg~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q  348 (380)
T PRK14297        288 GTEIKVPTVDGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQ  348 (380)
T ss_pred             CCcEEEEcCCCcEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEEEcCCCCCHHH
Confidence            45555554 3458999999999999999999999865555689999999999887654443

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.14  E-value=9.2e-11  Score=124.27  Aligned_cols=61  Identities=25%  Similarity=0.439  Sum_probs=47.0

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccc
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGL  315 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~  315 (513)
                      ++...++. ...++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-+..+..+..
T Consensus       295 G~~~~i~tldG~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~~Ls~~qk  356 (386)
T PRK14277        295 GGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQK  356 (386)
T ss_pred             CCEEEEEcCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHH
Confidence            45555544 33489999999999999999999998654456799999999997776544443

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.14  E-value=1.1e-10  Score=123.02  Aligned_cols=62  Identities=13%  Similarity=0.354  Sum_probs=47.0

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCC-CCCCCccEEEEEEEeecccccccccc
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDR-RRSLAGDLFVALHVDEKQGIHRDGLN  316 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~-~gg~~GDL~V~I~v~~h~~F~R~G~D  316 (513)
                      +++-.++. ...++|.||+|+++|++++|+|+|++.. ..+..|||||+|+|.-+..+..+...
T Consensus       290 G~~~~i~tldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~  353 (372)
T PRK14296        290 GNEIIIKTLDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKE  353 (372)
T ss_pred             CCEEEeeCCCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHH
Confidence            55555554 3348999999999999999999999732 23457999999999988765544433

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.13  E-value=9.2e-11  Score=124.29  Aligned_cols=59  Identities=27%  Similarity=0.401  Sum_probs=47.4

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccc
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRD  313 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~  313 (513)
                      ++...+.. ...++|.||+|+++|++++|+|+|.+...++.+|||||+|+|.-+.....+
T Consensus       294 G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~  353 (386)
T PRK14289        294 GGAVEVPTIDGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKE  353 (386)
T ss_pred             CCeEEeecCCceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEeCCCCCHH
Confidence            55555555 456899999999999999999999986555678999999999977654433

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.12  E-value=1.3e-10  Score=123.13  Aligned_cols=114  Identities=27%  Similarity=0.573  Sum_probs=81.8

Q ss_pred             eeeccCCCCCCcccc-----cccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeee---------------
Q 010330          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDH---------------  250 (513)
Q Consensus       191 ~~~C~~C~GtG~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~---------------  250 (513)
                      ...|+.|+|+|....     ....+|+.|+|+|.++.            ..|+.|.|.|.+....               
T Consensus       183 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~  250 (389)
T PRK14295        183 PRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIAD------------DPCLVCKGSGRAKSSRTMQVRIPAGVSDGQR  250 (389)
T ss_pred             CcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEec------------cCCCCCCCCceEeeeeEEEEEeCCCCCCCCE
Confidence            467889988886422     13457888888888753            4688888888664320               


Q ss_pred             -----------------------------------------------eeecCCceEEee--eeEEEEEcCCCCcCCCEEE
Q 010330          251 -----------------------------------------------CRRCGGNGEVQS--KRSMKVVIPPGVSNGATMQ  281 (513)
Q Consensus       251 -----------------------------------------------C~~C~G~G~v~~--~k~l~V~IP~Gv~~G~~Ir  281 (513)
                                                                     -..|++...++.  .+.++|.||+|+++|++|+
T Consensus       251 i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~ir  330 (389)
T PRK14295        251 IRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLR  330 (389)
T ss_pred             EEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEE
Confidence                                                           001245555543  3589999999999999999


Q ss_pred             EccccccCCCCCCCccEEEEEEEeeccccccccccc
Q 010330          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNL  317 (513)
Q Consensus       282 l~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL  317 (513)
                      |+|+|++. .++.+|||||+|+|.-+.....+...|
T Consensus       331 i~G~G~p~-~~~~~GDL~i~~~v~~P~~Ls~~qk~~  365 (389)
T PRK14295        331 VRGKGAVR-KDGTRGDLLVTVEVAVPKDLSGKAREA  365 (389)
T ss_pred             ECCCCcCC-CCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            99999985 345689999999999887655444333

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.12  E-value=1.3e-10  Score=122.85  Aligned_cols=62  Identities=24%  Similarity=0.432  Sum_probs=47.5

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeecccccccccc
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLN  316 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~D  316 (513)
                      ++...++. ...++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-+.....+...
T Consensus       286 G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q~~  348 (378)
T PRK14283        286 GDTVDVPTIDGPVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKE  348 (378)
T ss_pred             CCeEEEEcCCceEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHH
Confidence            44444553 347899999999999999999999986544568999999999977655444333

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.11  E-value=1.4e-10  Score=122.27  Aligned_cols=64  Identities=20%  Similarity=0.380  Sum_probs=50.6

Q ss_pred             CCceEEee-eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccce
Q 010330          255 GGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLF  318 (513)
Q Consensus       255 ~G~G~v~~-~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~  318 (513)
                      ++...+.. ....+|.||+|+++|++++|+|+|++...+..+|||||+|+|..|+.+..+...|+
T Consensus       278 G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll  342 (371)
T PRK14292        278 GGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREAL  342 (371)
T ss_pred             CCeEEEECCCCCEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            45555553 33458999999999999999999998655667899999999999988776655544

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.08  E-value=1.8e-10  Score=122.93  Aligned_cols=58  Identities=26%  Similarity=0.293  Sum_probs=45.7

Q ss_pred             cCCceEEee--eeEEEEEcCCC--CcCCCEEEEccccccCCCC-CCCccEEEEEEEeec--cccc
Q 010330          254 CGGNGEVQS--KRSMKVVIPPG--VSNGATMQIRGEGNFDRRR-SLAGDLFVALHVDEK--QGIH  311 (513)
Q Consensus       254 C~G~G~v~~--~k~l~V~IP~G--v~~G~~Irl~G~G~~~~~g-g~~GDL~V~I~v~~h--~~F~  311 (513)
                      |++.-.+..  .+.++|.||+|  +++|++++|+|+|++...+ ...|||||+|+|.-+  ..+.
T Consensus       289 lG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls  353 (421)
T PTZ00037        289 TGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFT  353 (421)
T ss_pred             cCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCC
Confidence            466666654  35699999999  9999999999999985433 357999999999977  5443

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.05  E-value=7.6e-10  Score=117.16  Aligned_cols=54  Identities=35%  Similarity=0.536  Sum_probs=44.3

Q ss_pred             CCceEEee--eeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeecc
Q 010330          255 GGNGEVQS--KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ  308 (513)
Q Consensus       255 ~G~G~v~~--~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~  308 (513)
                      ++...++.  .+.++|.||+|+++|++|+|+|+|++...+..+|||||+|+|.-+.
T Consensus       291 G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P~  346 (382)
T PRK14291        291 GTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPK  346 (382)
T ss_pred             CCEEEEecCCCCEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence            44555544  3579999999999999999999999865555689999999999775

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.03  E-value=1.5e-10  Score=120.23  Aligned_cols=72  Identities=36%  Similarity=0.644  Sum_probs=65.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC------cchHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS------PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~------~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~  114 (513)
                      --|+|+|||++.+++..|||++||+|.+|||||+-+.      .+.++++++|++||+.|+|+..|+.|=.||.....
T Consensus        97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p  174 (610)
T COG5407          97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP  174 (610)
T ss_pred             CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence            4699999999999999999999999999999998653      35789999999999999999999999999975443

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.82  E-value=5.1e-09  Score=97.60  Aligned_cols=52  Identities=31%  Similarity=0.450  Sum_probs=45.9

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHHhhccchhhhhccc
Q 010330           56 ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        56 as~~eIk~ayr~la~k~HPD~n~~~------~a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      .+..+|+++||+|+++||||+.+..      .+.+.|..|++||++|+||.+|+.|+.
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL   60 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML   60 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            4788999999999999999985432      266789999999999999999999996

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.78  E-value=1.8e-08  Score=103.02  Aligned_cols=71  Identities=30%  Similarity=0.459  Sum_probs=63.4

Q ss_pred             cccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCC
Q 010330          310 IHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDI  388 (513)
Q Consensus       310 F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~l  388 (513)
                      +.|.|.||++++.|||.||++|+++.| +++|. ++|+||+|+++|++++++|+|++.       |||||+|+|.-+..+
T Consensus       125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~f  196 (291)
T PRK14299        125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPVF  196 (291)
T ss_pred             CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCCe
Confidence            357899999999999999999999998 78884 789999999999999999999862       999999999866543

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=98.76  E-value=1.2e-08  Score=96.46  Aligned_cols=63  Identities=19%  Similarity=0.265  Sum_probs=55.1

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHHhhccchhhhhcc
Q 010330           44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYD  106 (513)
Q Consensus        44 ~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~~~------a~~~f~~i~~AyevL~d~~kR~~YD  106 (513)
                      .|||++||+++.  .+..+++++|++|.+++|||+.....      +.+.-..||+||.+|+||.+|+.|=
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YL   72 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAI   72 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHH
Confidence            599999999988  89999999999999999999865332      3445678999999999999999994

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=98.70  E-value=2.7e-08  Score=86.99  Aligned_cols=61  Identities=36%  Similarity=0.760  Sum_probs=50.1

Q ss_pred             eeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEee
Q 010330          190 CFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQS  262 (513)
Q Consensus       190 r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~  262 (513)
                      ..+.|..|+|+|..      +|+.|+|+|.+...+   .+.+++..+|+.|+|+|+.   .|..|.|.|++..
T Consensus        40 ~~v~C~~C~GsG~~------~C~~C~G~G~v~~~~---~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~~  100 (111)
T PLN03165         40 NTQPCFPCSGTGAQ------VCRFCVGSGNVTVEL---GGGEKEVSKCINCDGAGSL---TCTTCQGSGIQPR  100 (111)
T ss_pred             cCCCCCCCCCCCCc------CCCCCcCcCeEEEEe---CCcEEEEEECCCCCCccee---eCCCCCCCEEEee
Confidence            45789999999983      899999999987543   2346667899999999985   4999999998764

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.62  E-value=2.5e-08  Score=82.65  Aligned_cols=48  Identities=29%  Similarity=0.608  Sum_probs=37.5

Q ss_pred             eEEEEEcCCCCcCCCEEEEccccccCCCCC-CCccEEEEEEEeeccccc
Q 010330          264 RSMKVVIPPGVSNGATMQIRGEGNFDRRRS-LAGDLFVALHVDEKQGIH  311 (513)
Q Consensus       264 k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg-~~GDL~V~I~v~~h~~F~  311 (513)
                      +.++|.||+|+++|++++++|+|.+...+. ..|||||+++|.-+..+.
T Consensus        27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls   75 (81)
T PF01556_consen   27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLS   75 (81)
T ss_dssp             -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTS
T ss_pred             CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCC
Confidence            567899999999999999999999765554 799999999999776654

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.59  E-value=4e-08  Score=92.86  Aligned_cols=63  Identities=30%  Similarity=0.499  Sum_probs=57.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHHhhccchhhhhc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVY  105 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--~~a~~~f~~i~~AyevL~d~~kR~~Y  105 (513)
                      +-|+|+||.|.++.+.++||+.||+|++..|||+|++  +.|...|.-+..||.+|-|+..|..-
T Consensus        52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~  116 (250)
T KOG1150|consen   52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRC  116 (250)
T ss_pred             ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence            4699999999999999999999999999999999996  57889999999999999999866543

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.55  E-value=2.2e-07  Score=95.62  Aligned_cols=74  Identities=22%  Similarity=0.464  Sum_probs=61.4

Q ss_pred             cccccceEEEecCHHHHhcCCeeEE----eccC--C--------cEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEE
Q 010330          312 RDGLNLFSKISVDYTEAILGTSMEV----ETVE--G--------MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHL  377 (513)
Q Consensus       312 R~G~DL~~~~~Isl~eAllG~~v~V----~tld--G--------~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~  377 (513)
                      +.|.||++.+.|+|.||+.|+...|    ++++  |        .++|.||+|+++|++++++|+|+|..++ ..+||||
T Consensus       115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~  193 (306)
T PRK10266        115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW  193 (306)
T ss_pred             CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence            4688999999999999999995544    5554  3        3578899999999999999999996543 4689999


Q ss_pred             EEEEEEcCCC
Q 010330          378 FIVNVLIPKD  387 (513)
Q Consensus       378 V~f~V~~P~~  387 (513)
                      |+|+|. |..
T Consensus       194 v~i~v~-ph~  202 (306)
T PRK10266        194 LVIHIA-PHP  202 (306)
T ss_pred             EEEEEc-CCC
Confidence            999999 755

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.47  E-value=1.1e-07  Score=93.57  Aligned_cols=66  Identities=36%  Similarity=0.494  Sum_probs=58.8

Q ss_pred             cCcccccccCCC---CCHHHHHHHHHHHHHHhCCCCCC---CcchHHHHHHHHHHHHhhccchhhhhccccc
Q 010330           44 TDYYSTLNVRQN---ATLQEIKTSYRKLARKYHPDINK---SPGAEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (513)
Q Consensus        44 ~d~Y~iLgv~~~---as~~eIk~ayr~la~k~HPD~n~---~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G  109 (513)
                      .|+|.+|||+.-   |++..|.+|.++...+||||+..   +.+..+.|+.|+.||+||+|+.+|.+||.--
T Consensus        43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d  114 (379)
T COG5269          43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND  114 (379)
T ss_pred             hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence            599999999864   89999999999999999999863   2456789999999999999999999999743

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.33  E-value=4.6e-07  Score=87.42  Aligned_cols=55  Identities=25%  Similarity=0.567  Sum_probs=51.4

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHH-hhcc
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYE-VLSD   98 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~Aye-vL~d   98 (513)
                      +.||++|||..+|+++|++.||.+||+++|||...+....+.|.+|.+||. ||+.
T Consensus        47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999988888899999999999 7764

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.31  E-value=1.1e-06  Score=90.45  Aligned_cols=55  Identities=31%  Similarity=0.493  Sum_probs=45.5

Q ss_pred             ecCCceEEee--eeEEEEEcCCC--CcCCCEEEEccccccCCCCCCCccEEEEEEEeecc
Q 010330          253 RCGGNGEVQS--KRSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ  308 (513)
Q Consensus       253 ~C~G~G~v~~--~k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~  308 (513)
                      .|++...+.+  .+.+++.++||  +.+|++.+++|+|++-.... .|||||.+.|+-++
T Consensus       266 l~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  266 LCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFPK  324 (337)
T ss_pred             cccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcCC
Confidence            4555555543  58999999999  99999999999999965554 99999999999776

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.19  E-value=1.4e-06  Score=98.31  Aligned_cols=56  Identities=36%  Similarity=0.494  Sum_probs=47.8

Q ss_pred             cccccCcccccccCCC----CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhc
Q 010330           40 RAAGTDYYSTLNVRQN----ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS   97 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~----as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~   97 (513)
                      ++..-+-|+||.|+-+    -..+.||++|+|||.+||||+||  +..++|..+++|||.|+
T Consensus      1277 ~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP--EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1277 TMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP--EGREMFERVNKAYELLS 1336 (2235)
T ss_pred             ccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHH
Confidence            3445688999999754    24478999999999999999994  67899999999999998

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=98.06  E-value=3.2e-06  Score=80.55  Aligned_cols=49  Identities=27%  Similarity=0.609  Sum_probs=43.9

Q ss_pred             eecCCCCCCCcEEEe--eeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEc
Q 010330          234 VSTCSKCGGDGKIII--DHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR  283 (513)
Q Consensus       234 ~~~C~~C~G~G~~i~--~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~  283 (513)
                      ..+|+.|+|+|+++.  ++|+.|+|+|++..++.+.+.+ .|+.+|++|++.
T Consensus        99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642        99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CCcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            467999999999887  5799999999999999999999 999999999875

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.75  E-value=1.8e-05  Score=85.49  Aligned_cols=70  Identities=33%  Similarity=0.782  Sum_probs=44.1

Q ss_pred             eeccCCCCCCcccccccccCcccCcccEEEEEe--------ecCCcceee-eecCCCCCCCcEE-EeeeeeecCCceEEe
Q 010330          192 ETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ--------RTPFGLISQ-VSTCSKCGGDGKI-IIDHCRRCGGNGEVQ  261 (513)
Q Consensus       192 ~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~--------~~~~g~~~~-~~~C~~C~G~G~~-i~~~C~~C~G~G~v~  261 (513)
                      ..|+.|+|+|.... ....|+.|+|+|..-...        +..+-++.. ..+|+.|.|+|++ +...|+.|+|+|.+.
T Consensus         3 ~~C~~C~g~G~i~v-~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv~   81 (715)
T COG1107           3 KKCPECGGKGKIVV-GEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKVL   81 (715)
T ss_pred             ccccccCCCceEee-eeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeEE
Confidence            46888888887643 346788888888762110        001111222 3578888888876 456688888887665


Q ss_pred             e
Q 010330          262 S  262 (513)
Q Consensus       262 ~  262 (513)
                      .
T Consensus        82 ~   82 (715)
T COG1107          82 T   82 (715)
T ss_pred             e
Confidence            3

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.63  E-value=8.5e-05  Score=63.86  Aligned_cols=55  Identities=24%  Similarity=0.284  Sum_probs=46.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccch
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE  100 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~  100 (513)
                      .+.--.||||+++++.+.||+|+|++....|||+...|   -.-.+|+||+++|....
T Consensus        55 r~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP---YlAsKINEAKdlLe~~~  109 (112)
T KOG0723|consen   55 RREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP---YLASKINEAKDLLEGTS  109 (112)
T ss_pred             hHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH---HHHHHHHHHHHHHhccc
Confidence            35666799999999999999999999999999998554   33467999999997543

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=97.35  E-value=0.00058  Score=76.72  Aligned_cols=71  Identities=49%  Similarity=0.871  Sum_probs=67.3

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~  114 (513)
                      +|||++|||+++|+.++||+|||+||++||||+++.+.+.++|++|++||++|+||.+|+.||+||.+++.
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d   72 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD   72 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence            69999999999999999999999999999999998878889999999999999999999999999987654

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=97.27  E-value=0.00014  Score=58.00  Aligned_cols=43  Identities=33%  Similarity=0.845  Sum_probs=30.6

Q ss_pred             eeeccCCCCCCccccc---------ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCc
Q 010330          191 FETCDSCGGTGAKSSN---------CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDG  244 (513)
Q Consensus       191 ~~~C~~C~GtG~~~~~---------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  244 (513)
                      ...|+.|+|+|.....         ...+|+.|+|+|.++ .          ...|+.|+|.|
T Consensus        15 ~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i-~----------~~~C~~C~G~g   66 (66)
T PF00684_consen   15 PKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII-E----------KDPCKTCKGSG   66 (66)
T ss_dssp             -EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE--T----------SSB-SSSTTSS
T ss_pred             CcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE-C----------CCCCCCCCCcC
Confidence            4589999999987432         457899999999986 1          26799999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=96.94  E-value=0.00084  Score=72.97  Aligned_cols=47  Identities=38%  Similarity=0.825  Sum_probs=36.3

Q ss_pred             eeeccCCCCCCccccc------------------ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe
Q 010330          191 FETCDSCGGTGAKSSN------------------CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (513)
Q Consensus       191 ~~~C~~C~GtG~~~~~------------------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~  248 (513)
                      ...|+.|+|+|....-                  .-..|+.|+|+|.+..           ..+|+.|+|+|++..
T Consensus        18 ~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v-----------~~~c~~c~G~gkv~~   82 (715)
T COG1107          18 EEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTV-----------YDTCPECGGTGKVLT   82 (715)
T ss_pred             eeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEE-----------EeecccCCCceeEEe
Confidence            4679999999975321                  1347999999998754           268999999999865

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=96.45  E-value=0.0027  Score=58.44  Aligned_cols=70  Identities=23%  Similarity=0.415  Sum_probs=54.3

Q ss_pred             ccccCcccccccC--CCCCHHHHHHHHHHHHHHhCCCCCCC------cchHHHHHHHHHHHHhhccchhhhhccc--ccc
Q 010330           41 AAGTDYYSTLNVR--QNATLQEIKTSYRKLARKYHPDINKS------PGAEEKFKEISSAYEVLSDDEKRSVYDR--FGE  110 (513)
Q Consensus        41 ~~~~d~Y~iLgv~--~~as~~eIk~ayr~la~k~HPD~n~~------~~a~~~f~~i~~AyevL~d~~kR~~YD~--~G~  110 (513)
                      ...++||.++|..  ....+.-++.-|--..++.|||+...      .-|.+.-.++++||.+|.||.+|+.|=.  +|.
T Consensus         5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~g~   84 (168)
T KOG3192|consen    5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLKGQ   84 (168)
T ss_pred             chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence            3457999999754  44566667768999999999998431      2366778999999999999999999953  453

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.35  E-value=0.0029  Score=55.61  Aligned_cols=41  Identities=32%  Similarity=0.748  Sum_probs=32.2

Q ss_pred             eccCCCCCCcccc------cccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe
Q 010330          193 TCDSCGGTGAKSS------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (513)
Q Consensus       193 ~C~~C~GtG~~~~------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~  248 (513)
                      .|+.|+|+|....      .....|+.|+|+|..               .|+.|.|.|.+.+
T Consensus        54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---------------~C~~C~G~G~~~~  100 (111)
T PLN03165         54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---------------TCTTCQGSGIQPR  100 (111)
T ss_pred             CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---------------eCCCCCCCEEEee
Confidence            7999999987532      125689999999963               3999999998755

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=95.63  E-value=0.012  Score=60.02  Aligned_cols=31  Identities=32%  Similarity=0.815  Sum_probs=18.1

Q ss_pred             cCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEE
Q 010330          236 TCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVV  269 (513)
Q Consensus       236 ~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~  269 (513)
                      .|++|.|.|.   .+|.+|.|+|.+.....+.|.
T Consensus       247 ~C~tC~grG~---k~C~TC~gtgsll~~t~~vV~  277 (406)
T KOG2813|consen  247 ECHTCKGRGK---KPCTTCSGTGSLLNYTRIVVY  277 (406)
T ss_pred             cCCcccCCCC---cccccccCccceeeeEEEEEE
Confidence            3555555553   358888888876654444443

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=95.59  E-value=0.0093  Score=57.12  Aligned_cols=30  Identities=30%  Similarity=0.643  Sum_probs=13.3

Q ss_pred             eeeccCCCCCCcccccccccCcccCcccEEE
Q 010330          191 FETCDSCGGTGAKSSNCIQSCKACWGRGGVL  221 (513)
Q Consensus       191 ~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~  221 (513)
                      ...|+.|+|+|...... ..|+.|+|+|++.
T Consensus        99 ~~~C~~C~G~G~~i~~~-~~C~~C~G~G~v~  128 (186)
T TIGR02642        99 SCKCPRCRGTGLIQRRQ-RECDTCAGTGRFR  128 (186)
T ss_pred             CCcCCCCCCeeEEecCC-CCCCCCCCccEEe
Confidence            44555555555432111 3455555555443

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.44  E-value=0.008  Score=57.01  Aligned_cols=53  Identities=38%  Similarity=0.532  Sum_probs=46.4

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--------cchHHHHHHHHHHHHhh
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--------PGAEEKFKEISSAYEVL   96 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--------~~a~~~f~~i~~AyevL   96 (513)
                      .|.|.+|++...++..+|+++|+++...+|||+-..        ..+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999997321        35788899999999853

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=94.33  E-value=0.027  Score=53.44  Aligned_cols=63  Identities=30%  Similarity=0.455  Sum_probs=48.1

Q ss_pred             CcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHHhhccchhhhhccc
Q 010330           45 DYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        45 d~Y~iLgv~~~a--s~~eIk~ayr~la~k~HPD~n~~~~------a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      ||+...|..+.+  ..+.++..|+.+.++||||+.....      +-+.+..++.||.+|.||.+|+.|=.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l   72 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL   72 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            345555555543  4566899999999999999976432      33567899999999999999999853

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=93.89  E-value=0.032  Score=56.89  Aligned_cols=59  Identities=31%  Similarity=0.659  Sum_probs=38.1

Q ss_pred             eeeccCCCCCCccc--ccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEe
Q 010330          191 FETCDSCGGTGAKS--SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQ  261 (513)
Q Consensus       191 ~~~C~~C~GtG~~~--~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~  261 (513)
                      ..+|+.|+|.|...  ...+..|..|-|   +..      -...+...|..|+|.|+..   |.+|.|.|.++
T Consensus       198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G---~~~------~k~gt~~~C~~C~G~G~~~---C~tC~grG~k~  258 (406)
T KOG2813|consen  198 AMVCHGCSGSGSNSYGIGTPMHCMSCTG---VPP------PKIGTHDLCYMCHGRGIKE---CHTCKGRGKKP  258 (406)
T ss_pred             ceeccCcCCCCccccccCcceecccccC---CCC------CCCCccchhhhccCCCccc---CCcccCCCCcc
Confidence            46899999998521  234567888877   110      0112335688888888654   77888888765

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=93.86  E-value=0.052  Score=59.05  Aligned_cols=68  Identities=28%  Similarity=0.382  Sum_probs=47.8

Q ss_pred             cccccccCcccccccccCCCCCcccccccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--------
Q 010330           10 VNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--------   81 (513)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~--------   81 (513)
                      .||+.=|+|||.-=|.-|+-                  +-+.+..=.+.+.|||||||..+..|||+-+..+        
T Consensus       372 ~NIRALLSTLh~VLW~es~W------------------qpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~I  433 (453)
T KOG0431|consen  372 GNIRALLSTLHYVLWPESGW------------------QPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYI  433 (453)
T ss_pred             ccHHHHHHHHhHhhcCccCc------------------ccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHH
Confidence            58888899998887774442                  1123333459999999999999999999976432        


Q ss_pred             hHHHHHHHHHHHHh
Q 010330           82 AEEKFKEISSAYEV   95 (513)
Q Consensus        82 a~~~f~~i~~Ayev   95 (513)
                      +++.|..+++|+..
T Consensus       434 aekvfd~l~eawn~  447 (453)
T KOG0431|consen  434 AEKVFDALSEAWNK  447 (453)
T ss_pred             HHHHHHHHHHHHHh
Confidence            45556666666554

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=90.40  E-value=0.45  Score=42.93  Aligned_cols=55  Identities=24%  Similarity=0.317  Sum_probs=39.7

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchh
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEK  101 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~k  101 (513)
                      ..-..||||++..+.+||.+.|.+|-...+|++.   +..-.=.+|..|.|.|..+.+
T Consensus        58 ~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG---GSfYLQSKV~rAKErl~~El~  112 (127)
T PF03656_consen   58 DEARQILNVKEELSREEIQKRYKHLFKANDPSKG---GSFYLQSKVFRAKERLEQELK  112 (127)
T ss_dssp             HHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCT---S-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcC---CCHHHHHHHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999976   444444578889988876553

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=84.99  E-value=1.4  Score=42.64  Aligned_cols=38  Identities=26%  Similarity=0.546  Sum_probs=30.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhc
Q 010330           53 RQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS   97 (513)
Q Consensus        53 ~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~   97 (513)
                      +++||.+||.+|+.++..+|-       +.++.-.+|..||+.+.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~-------gd~~~~~~IEaAYD~IL   38 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYA-------GDEKSREAIEAAYDAIL   38 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHH
Confidence            578999999999999999993       33455678999999644

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=81.70  E-value=1.6  Score=44.78  Aligned_cols=59  Identities=36%  Similarity=0.764  Sum_probs=40.6

Q ss_pred             eeEeeeEEEEEeeeeeeccCCCCCCcccc----c-ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe
Q 010330          177 ESIFGGQRGIEVSCFETCDSCGGTGAKSS----N-CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (513)
Q Consensus       177 Ea~~G~~k~v~~~r~~~C~~C~GtG~~~~----~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~  248 (513)
                      +..+|.. .........|..|.|+|....    . ...+|..|+|.|.+..            ..|..|.|.|.+..
T Consensus       168 ~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~------------~~c~~~~g~~~v~~  231 (288)
T KOG0715|consen  168 ETCFGSG-AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLR------------DNCQACSGAGQVRR  231 (288)
T ss_pred             ccccCcC-cccccccccchhhhCcccccccccCCcceeecccccccceecc------------chHHHhhcchhhhh
Confidence            3444444 344566789999999993322    1 1227999999998764            34999999996544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	513
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		3e-20
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		8e-17
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		2e-16
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		3e-15
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		8e-15
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		6e-07
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		1e-14
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		1e-14
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		1e-14
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		2e-14
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		2e-14
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		2e-14
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		2e-14
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		2e-14
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		2e-14
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		2e-13
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		9e-13
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		1e-12
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		5e-11
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		1e-10
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		3e-10
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		5e-08
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		6e-07
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		7e-07
2q2g_A	180	Crystal Structure Of Dimerization Domain Of Hsp40 F		1e-06
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		1e-06
1exk_A	79	Solution Structure Of The Cysteine-Rich Domain Of T		4e-06
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		6e-06
2ctt_A	104	Solution Structure Of Zinc Finger Domain From Human		9e-06
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		1e-04
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		4e-04
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		5e-04
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		7e-04

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/73 (58%), Positives = 56/73 (76%)
Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR 102
           G DYY TL + + A+ +EIK +YR+ A +YHPD NK PGAEEKFKEI+ AY+VLSD  KR
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR 61
Query: 103 SVYDRFGEAGITG 115
            ++DR+GE G+ G
Sbjct: 62  EIFDRYGEEGLKG 74

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 85.1 bits (209), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
Query: 37  GMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
           GM++   T YY  L V+ NAT +E+K +YRKLA KYHPD  K+P   EKFK+IS AYEVL
Sbjct: 1   GMVKE--TTYYDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVL 56
Query: 97  SDDEKRSVYDRFGE 110
           SD +KR +YD+ GE
Sbjct: 57  SDAKKRELYDKGGE 70

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+ + V+    L+ IKT+YR+LARKYHPD++K P AE +FKE++ A+EVLSD+++R+ 
Sbjct: 6   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 65
Query: 105 YDR 107
           YD+
Sbjct: 66  YDQ 68

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 39  IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSD 98
           + A   D Y  L V + A+  +IK +Y+KLAR++HPD NK PGAE++F +IS AYE+LS+
Sbjct: 12  LSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSN 71
Query: 99  DEKRSVYDRFGEAGITG 115
           +EKR+ YD +G    +G
Sbjct: 72  EEKRTNYDHYGSGPSSG 88

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 49/64 (76%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+ L V+    L+ IKT+YR+LARKYHPD++K   AE KFK+++ A+EVL D+++R+ 
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88
Query: 105 YDRF 108
           YD+ 
Sbjct: 89  YDQL 92

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 256 GNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGL 315
           G  E ++ +++ V IP GV +G  ++++G+G         GDL++ +H+         G 
Sbjct: 173 GMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGH 232
Query: 316 NLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGD 375
           NL   + +   EA LG  + V T++    L +P G Q G  ++++  G   + + +  GD
Sbjct: 233 NLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKG---LVSKTHTGD 289
Query: 376 HLFIVNVLIPKDISDPERALVEEIA 400
              ++ +++P    +  R L +++A
Sbjct: 290 LFAVIKIVMPTKPDEKARELWQQLA 314

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-AEEKFKEISSAYEVLSDDE 100
           A  DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 101 KRSVYDRFGEAG 112
           KR+ YD++G A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDIN--KSPGAEEKFKEISSAYEVLSDDEKRS 103
           YY  L+V ++A+  +IK +YR+ A ++HPD N      AE+KFKE++ AYEVLSD  KR 
Sbjct: 4   YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63
Query: 104 VYDRFGEAGITGEYDGLSNTSQG 126
           +YDR+G  G+TG   G S    G
Sbjct: 64  IYDRYGREGLTGTGTGPSRAEAG 86

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 35  RRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAY 93
           R+  +  +G   Y  L + +NAT  +IK SYRKLA KYHPD N  +P A +KFKEI++A+
Sbjct: 8   RQRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAH 67
Query: 94  EVLSDDEKRSVYDRFGEAGI 113
            +L+D  KR++YD++G  G+
Sbjct: 68  AILTDATKRNIYDKYGSLGL 87

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           T YY  L V+ +A+  E+K +YRK+A K+HPD  K+P   E+FK+IS AYEVLSD++KR 
Sbjct: 8   TGYYDVLGVKPDASDNELKKAYRKMALKFHPD--KNPDGAEQFKQISQAYEVLSDEKKRQ 65
Query: 104 VYDRFGE 110
           +YD+ GE
Sbjct: 66  IYDQGGE 72

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-AEEKFKEISSAYEVLSDDE 100
           A  DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 101 KRSVYDRFGEAG 112
           KR+ YD++G A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V +NA+ +EIK +Y +LA+KYHPD NK  P A+EKF +++ AYEVLSD+ KR 
Sbjct: 8   DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67
Query: 104 VYDRFGEAGITG 115
            YD +G    +G
Sbjct: 68  QYDAYGSGPSSG 79

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-AEEKFKEISSAYEVLSDDE 100
           A  DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 101 KRSVYDRFGEAG 112
           KR+ YD++G A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/71 (50%), Positives = 49/71 (69%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V + A+ +++K +YR+LA K+HPD N +PGA E FK I +AY VLS+ EKR  
Sbjct: 8   DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQ 67
Query: 105 YDRFGEAGITG 115
           YD+FG    +G
Sbjct: 68  YDQFGSGPSSG 78

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVY 105
           YY  L V ++A+ ++IK ++ KLA KYHPD NKSP AE KF+EI+ AYE LSD  +R  Y
Sbjct: 9   YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEY 68
Query: 106 DRFGEAGITGEYDGLSNTSQG 126
           D  G +  T    G S  S G
Sbjct: 69  DTLGHSAFTSG-KGQSGPSSG 88

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN--KSPGAEEKFKEISSAYEVLSDDEK 101
            DYY  L+V + A+ + IK +YRKLA K+HPD N      AE +FK+++ AYEVLSD +K
Sbjct: 9   VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68
Query: 102 RSVYDRFGEAGITG 115
           R +YDR+G    +G
Sbjct: 69  RDIYDRYGSGPSSG 82

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           T  Y  L V  +A  QE+K  YRK A KYHPD  K  G  EKFKEIS A+E+L+D +KR 
Sbjct: 8   TKLYDLLGVSPSANEQELKKGYRKAALKYHPD--KPTGDTEKFKEISEAFEILNDPQKRE 65
Query: 104 VYDRFG 109
           +YD++G
Sbjct: 66  IYDQYG 71

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN--KSPGAEEKFKEISSAYEVLSDDEK 101
            +YY  L V+ +A+ ++IK +YRKLA ++HPD N      AE+KFK +S AYEVLSD +K
Sbjct: 9   ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 68
Query: 102 RSVYDRFG 109
           RS+YDR G
Sbjct: 69  RSLYDRAG 76

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVLSDDEKRS 103
           ++YS L V + A+ +EI+ +++KLA K HPD N  +P A   F +I+ AYEVL D++ R 
Sbjct: 22  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 81
Query: 104 VYDRFGEAGIT----GEYDGLS 121
            YD++GE G+     G+Y+  S
Sbjct: 82  KYDKYGEKGLEDNQGGQYESWS 103

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVLSDDEKRS 103
           ++YS L V + A+ +EI+ +++KLA K HPD N  +P A   F +I+ AYEVL D++ R 
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62
Query: 104 VYDRFGEAGIT----GEYDGLS 121
            YD++GE G+     G+Y+  S
Sbjct: 63  KYDKYGEKGLEDNQGGQYESWS 84

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 14/238 (5%)
Query: 166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
           DI++++  S EE   G    + ++    C  C G G K    ++ C +C G+G    T++
Sbjct: 13  DIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKG-AVKKCTSCNGQGIKFVTRQ 71
Query: 226 TPFGLISQVSTCSKCGGDGKII--IDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
               +    + C  C G G II   D C+ C G      ++ ++V + PG+ +G  +  +
Sbjct: 72  MGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFK 131
Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG-- 341
           GE +      + GD+   +     +   RDG +L  +  +D   AI G    +E V G  
Sbjct: 132 GEAD-QAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDW 190
Query: 342 MKDLRIPSGV-QPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEE 398
           +K   +P  V  PG    ++  G+P    P   G      N++I   I DPE     E
Sbjct: 191 LKVGIVPGEVIAPGMRKVIEGKGMP---IPKYGG----YGNLIIKFTIKDPENHFTSE 241

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 47  YSTLNV-RQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEK 101
           Y  L V R+    Q++  +YR LARK+HPD  K+      AEE+F+ I++AYE L DDE 
Sbjct: 18  YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77
Query: 102 RSVYDRF 108
           ++ YD +
Sbjct: 78  KTNYDYY 84

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 35  RRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPD----INKSPGAEEKFKEIS 90
           +R + ++   DYY  L V++NA  QEI  +YRKLA ++HPD      +   AE+KF +I+
Sbjct: 373 QRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIA 432
Query: 91  SAYEVLSDDEKRSVYD 106
           +A EVLSD E R  +D
Sbjct: 433 AAKEVLSDPEXRKKFD 448

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 35  RRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPD----INKSPGAEEKFKEIS 90
           +R + ++   DYY  L V++NA  QEI  +YRKLA ++HPD      +   AE+KF +I+
Sbjct: 373 QRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIA 432
Query: 91  SAYEVLSDDEKRSVYD 106
           +A EVLSD E R  +D
Sbjct: 433 AAKEVLSDPEMRKKFD 448

>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 266 MKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDY 325
           ++V I PG  +G  +   GEG+ +   +  GDL + +         RD  +L  K+++  
Sbjct: 44  VEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIXKVTIPL 103
Query: 326 TEAILGTSMEVETVEGMKDLRIP--SGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVL 383
             A+ G +  V T++  ++L+IP    V P     +   G P  N P  +GD +   ++ 
Sbjct: 104 VRALTGFTCPVTTLDN-RNLQIPIKEIVNPKTRKIVPNEGXPIKNQPGQKGDLILEFDIC 162
Query: 384 IPKDISDPERALVEE 398
            PK ++  ++ L++E
Sbjct: 163 FPKSLTPEQKKLIKE 177

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 253 RCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHR 312
           R G +G    K  + + + PG   G  +  + +G+++ +      L   +         R
Sbjct: 26  RKGPHG-ASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKR 84
Query: 313 DGLNLFSKISVDYTEAILGTSMEVETVEGMK-DLRIPSGVQPGDTVKLQQMGVPDINNPS 371
           DG +L   + + + E++LG S  ++T++G    L     VQP  T      G+P   NPS
Sbjct: 85  DGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPS 144
Query: 372 VRGDHLFIVNVLIPKDISDPERALVEE 398
            RG+ +    V  P  ++D ++  ++E
Sbjct: 145 QRGNLIVKYKVDYPISLNDAQKRAIDE 171

>pdb|1EXK|A Chain A, Solution Structure Of The Cysteine-Rich Domain Of The Escherichia Coli Chaperone Protein Dnaj Length = 79

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 186 IEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGK 245
           I +   E CD C G+GAK     Q+C  C G G V   Q    G  +   TC  C G G 
Sbjct: 6   IRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGT 61
Query: 246 IIIDHCRRCGGNGEVQ 261
           +I D C +C G+G V+
Sbjct: 62  LIKDPCNKCHGHGRVE 77

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 253 RCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHR 312
           R G +G    K  + + + PG   G  +  + +G+++ +      L   +         R
Sbjct: 26  RKGPHG-ASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKR 84
Query: 313 DGLNLFSKISVDYTEAILGTSMEVETVEGMK-DLRIPSGVQPGDTVKLQQMGVPDINNPS 371
           DG +L   + + + E++LG S  ++T++G    L     VQP  T      G+P   NPS
Sbjct: 85  DGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPS 144
Query: 372 VRGDHLFIVNVLIPKDISDPERALVE 397
            RG+ +    V  P  ++D ++  ++
Sbjct: 145 QRGNLIVKYKVDYPISLNDAQKRAID 170

>pdb|2CTT|A Chain A, Solution Structure Of Zinc Finger Domain From Human Dnaj Subfamily A Menber 3 Length = 104

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 171 LHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRT-PFG 229
           + L+F ++  G  +   V+  +TC+ C G G +    +Q C  C G G  ++T  T PF 
Sbjct: 8   MELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSG--METINTGPFV 65
Query: 230 LISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKR 264
           +    STC +CGG G III  C  C G G+ + K+
Sbjct: 66  M---RSTCRRCGGRGSIIISPCVVCRGAGQAKQKK 97

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKR 102
           T  Y  L V   AT  +IK +Y +    YHPD N  S  A E+F  IS AY VL     R
Sbjct: 17  TALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLR 76
Query: 103 SVYDR 107
             YDR
Sbjct: 77  RKYDR 81

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAE-----EKFKEISSAYEVLS 97
           D+YS L    +A + ++K  Y+KL   YHPD   +  P        +KF EI  A+++L 
Sbjct: 17  DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 98  DDEKRSVYD 106
           ++E +  YD
Sbjct: 77  NEETKKKYD 85

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY+ L   + +++++I   ++  A + HPD + ++P A E F+++  A E+L+++E R+
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80
Query: 104 VYDRF 108
            YD +
Sbjct: 81  RYDHW 85

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAE-----EKFKEISSAYEVLS 97
           D+YS L    +A + ++K  Y+KL   YHPD   +  P        +KF EI  A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70
Query: 98  DDEKRSVYD 106
           ++E +  YD
Sbjct: 71  NEETKREYD 79

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	513
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	7e-84
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	2e-55
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	6e-43
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	7e-42
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	2e-40
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	2e-37
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	1e-36
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	2e-36
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	2e-36
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	2e-36
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	4e-36
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	5e-36
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	1e-35
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	3e-35
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	6e-35
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	9e-35
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	5e-34
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	1e-33
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	2e-33
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	1e-32
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	1e-30
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	2e-30
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	9e-29
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	1e-28
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	3e-28
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	2e-27
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	4e-27
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	4e-25
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	1e-23
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	3e-22
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	6e-19
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	1e-18
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	1e-17
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	1e-16
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	3e-16
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	2e-15
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	1e-14
2guz_A	71	Mitochondrial import inner membrane translocase su	4e-12
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	2e-11
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	9e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	3e-07
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	3e-07

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  261 bits (670), Expect = 7e-84
 Identities = 77/361 (21%), Positives = 143/361 (39%), Gaps = 70/361 (19%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+ L V+    L+ IKT+YR+LARKYHPD++K   AE KFK+++ A+EVL D+++R+ 
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YD+  +      +     T +     + +   F     +FG                  G
Sbjct: 89  YDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFS---SMFGQQAHQRR-----RQHAARG 140

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D+  ++ +  EE++    R I  +                         +G       +
Sbjct: 141 HDLEIEVAVFLEETLAEQTRTISYN-------------------LPVYNVFGMIESETPK 181

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
                                                    + V IP GV +G  ++++G
Sbjct: 182 T----------------------------------------LNVKIPAGVVDGQRIRLKG 201

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKD 344
           +G         GDL++ +H+         G NL   + +   EA LG  + V T++    
Sbjct: 202 QGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESIL 261

Query: 345 LRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAFLKS 404
           L +P G Q G  ++++  G+    + +  GD   ++ +++P    +  R L +++A  ++
Sbjct: 262 LTVPPGSQAGQRLRIKGKGLV---SKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA 318

Query: 405 P 405
            
Sbjct: 319 S 319

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  185 bits (471), Expect = 2e-55
 Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 10/240 (4%)

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G DI++++  S EE   G    + ++    C  C G G K    ++ C +C G+G    T
Sbjct: 11  GKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKK-GAVKKCTSCNGQGIKFVT 69

Query: 224 QRTPFGLISQVSTCSKCGGDGKIII--DHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
           ++    +    + C  C G G II   D C+ C G      ++ ++V + PG+ +G  + 
Sbjct: 70  RQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIV 129

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEG 341
            +GE +      + GD+   +     +   RDG +L  +  +D   AI G    +E V G
Sbjct: 130 FKGEAD-QAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188

Query: 342 MK-DLRIPSG--VQPGDTVKLQQMGVPDINNPSVRGDHLFI-VNVLIPKDISDPERALVE 397
               + I  G  + PG    ++  G+P        G+ L I   +  P++    E  L +
Sbjct: 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGG-YGN-LIIKFTIKDPENHFTSEENLKK 246

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  146 bits (371), Expect = 6e-43
 Identities = 38/87 (43%), Positives = 56/87 (64%)

Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKE 88
            +  S     + A   D Y  L V + A+  +IK +Y+KLAR++HPD NK PGAE++F +
Sbjct: 2   SSGSSGILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQ 61

Query: 89  ISSAYEVLSDDEKRSVYDRFGEAGITG 115
           IS AYE+LS++EKR+ YD +G    +G
Sbjct: 62  ISKAYEILSNEEKRTNYDHYGSGPSSG 88

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  143 bits (362), Expect = 7e-42
 Identities = 43/73 (58%), Positives = 56/73 (76%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR 102
           G DYY TL + + A+ +EIK +YR+ A +YHPD NK PGAEEKFKEI+ AY+VLSD  KR
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR 61

Query: 103 SVYDRFGEAGITG 115
            ++DR+GE G+ G
Sbjct: 62  EIFDRYGEEGLKG 74

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  139 bits (353), Expect = 2e-40
 Identities = 36/75 (48%), Positives = 50/75 (66%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
            +  DYY  L V + A+ +++K +YR+LA K+HPD N +PGA E FK I +AY VLS+ E
Sbjct: 4   GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPE 63

Query: 101 KRSVYDRFGEAGITG 115
           KR  YD+FG    +G
Sbjct: 64  KRKQYDQFGSGPSSG 78

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  135 bits (342), Expect = 2e-37
 Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 18/176 (10%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           ++YS L V + A+ +EI+ +++KLA K HPD N  +P A   F +I+ AYEVL D++ R 
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNF 163
            YD++GE G+     G        + +  Y   FG  D     +           N G  
Sbjct: 63  KYDKYGEKGLEDNQGG------QYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGEL 116

Query: 164 GLDIRY--------DLHLSFEESI--FGGQRGI-EVSCFETCDSCGGTGAKSSNCI 208
                Y        DL  ++ E      G   I  V+C +    C   G  S   +
Sbjct: 117 WFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSL 172

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  129 bits (326), Expect = 1e-36
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
            YY  L V ++A+ ++IK ++ KLA KYHPD NKSP AE KF+EI+ AYE LSD  +R  
Sbjct: 8   SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKE 67

Query: 105 YDRFGEAGITGEYDGLSNTSQG 126
           YD  G +  T    G S  S G
Sbjct: 68  YDTLGHSAFTSGK-GQSGPSSG 88

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  130 bits (328), Expect = 2e-36
 Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 3/89 (3%)

Query: 28  SGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKF 86
           SG++   R      +G   Y  L + +NAT  +IK SYRKLA KYHPD N  +P A +KF
Sbjct: 3   SGSSGRQRSLS--TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKF 60

Query: 87  KEISSAYEVLSDDEKRSVYDRFGEAGITG 115
           KEI++A+ +L+D  KR++YD++G  G+  
Sbjct: 61  KEINNAHAILTDATKRNIYDKYGSLGLYV 89

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  128 bits (324), Expect = 2e-36
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDD 99
            +  DYY  L V +NA+ +EIK +Y +LA+KYHPD NK  P A+EKF +++ AYEVLSD+
Sbjct: 4   GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDE 63

Query: 100 EKRSVYDRFGEAGITG 115
            KR  YD +G    +G
Sbjct: 64  VKRKQYDAYGSGPSSG 79

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  128 bits (324), Expect = 2e-36
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 2/70 (2%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
              T YY  L V+ +A+  E+K +YRK+A K+HPD N  P   E+FK+IS AYEVLSD++
Sbjct: 5   VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKN--PDGAEQFKQISQAYEVLSDEK 62

Query: 101 KRSVYDRFGE 110
           KR +YD+ GE
Sbjct: 63  KRQIYDQGGE 72

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  128 bits (323), Expect = 4e-36
 Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 2/73 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK--SPGAEEKFKEISSAYEVLSDDEKR 102
           DYY  L+V + A+ + IK +YRKLA K+HPD N      AE +FK+++ AYEVLSD +KR
Sbjct: 10  DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69

Query: 103 SVYDRFGEAGITG 115
            +YDR+G    +G
Sbjct: 70  DIYDRYGSGPSSG 82

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  128 bits (323), Expect = 5e-36
 Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKR 102
            YY  L+V ++A+  +IK +YR+ A ++HPD N      AE+KFKE++ AYEVLSD  KR
Sbjct: 3   SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62

Query: 103 SVYDRFGEAGITGEYDGLSNTSQG 126
            +YDR+G  G+TG   G S    G
Sbjct: 63  EIYDRYGREGLTGTGTGPSRAEAG 86

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  127 bits (322), Expect = 1e-35
 Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY+ L   + +++++I   ++  A + HPD +  +P A E F+++  A E+L+++E R+
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPF 130
            YD +  + ++  +      +  V   
Sbjct: 81  RYDHWRRSQMSMPFQQWEALNDSVKTS 107

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  125 bits (317), Expect = 3e-35
 Identities = 43/112 (38%), Positives = 52/112 (46%), Gaps = 24/112 (21%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
              T  Y  L V  +A  QE+K  YRK A KYHPD  K  G  EKFKEIS A+E+L+D +
Sbjct: 5   VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPD--KPTGDTEKFKEISEAFEILNDPQ 62

Query: 101 KRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGG 152
           KR +YD++G                            GG     GG G AGG
Sbjct: 63  KREIYDQYGLEAARS----------------------GGPSFGPGGPGGAGG 92

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  125 bits (315), Expect = 6e-35
 Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 32  RSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEIS 90
            S  +G    + T  Y  L V   AT  +IK +Y +    YHPD N  S  A E+F  IS
Sbjct: 5   SSGSQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRIS 64

Query: 91  SAYEVLSDDEKRSVYDRFGEAGITGEYDG 119
            AY VL     R  YDR   +       G
Sbjct: 65  QAYVVLGSATLRRKYDRGLLSDEDLRGPG 93

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  124 bits (314), Expect = 9e-35
 Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK--SPGAEEKFKEISSAYEVLSDDEKR 102
           +YY  L V+ +A+ ++IK +YRKLA ++HPD N      AE+KFK +S AYEVLSD +KR
Sbjct: 10  NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69

Query: 103 SVYDRFGEAGITG 115
           S+YDR G      
Sbjct: 70  SLYDRAGCDSWRA 82

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  122 bits (308), Expect = 5e-34
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)

Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-------SPG 81
           G++ S    + +    D+YS L    +A + ++K  Y+KL   YHPD             
Sbjct: 1   GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEE 60

Query: 82  AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG 115
             +KF EI  A+++L ++E +  YD       +G
Sbjct: 61  CMQKFIEIDQAWKILGNEETKKKYDLQRSGPSSG 94

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  121 bits (306), Expect = 1e-33
 Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 4/103 (3%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +KR+
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGG 146
            YD++G A       G      G D  +++   FG    +FGG
Sbjct: 64  AYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFG---DIFGG 103

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  121 bits (306), Expect = 2e-33
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 5/73 (6%)

Query: 45  DYYSTLNVRQNA-TLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDD 99
           + Y  L V +     Q++  +YR LARK+HPD  K+      AEE+F+ I++AYE L DD
Sbjct: 16  NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDD 75

Query: 100 EKRSVYDRFGEAG 112
           E ++ YD + +  
Sbjct: 76  EAKTNYDYYLDHP 88

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score =  118 bits (298), Expect = 1e-32
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           D +  L V+  A+  E+  +YRKLA   HPD   +PG+E+ FK + +A   L  + K   
Sbjct: 28  DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87

Query: 105 YD 106
             
Sbjct: 88  SS 89

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  115 bits (290), Expect = 1e-30
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 13/115 (11%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-------AEEKFKEISSAYEVLS 97
           D+YS L    +A + ++K  Y+KL   YHPD   +           +KF EI  A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 98  DDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGG 152
           ++E +  YD           D L N         L    +   D  F      GG
Sbjct: 71  NEETKREYDLQRCE------DDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGG 119

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104

 Score =  113 bits (284), Expect = 2e-30
 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G      + L+F ++  G  +   V+  +TC+ C G G +    +Q C  C G G     
Sbjct: 1   GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGME--- 57

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKV 268
                G     STC +CGG G III  C  C G G+ + K+    
Sbjct: 58  -TINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRSGP 101

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score =  107 bits (270), Expect = 9e-29
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 5/75 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKR 102
           +  S +         E K   R+L  K+HPD N      A E FK + +    L   EK+
Sbjct: 17  EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73

Query: 103 SVYDRFGEAGITGEY 117
           +  D+  +      +
Sbjct: 74  AFLDQNADRASRRTF 88

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score =  108 bits (271), Expect = 1e-28
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 10/105 (9%)

Query: 39  IRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
           +R         L + ++A   +  ++ +Y K  +++HPD     G EEK K++++ Y+ +
Sbjct: 3   MREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG---GDEEKMKKMNTLYKKM 59

Query: 97  SDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSD 141
            D  K +    FG      E       + G D +E +   F   +
Sbjct: 60  EDGVKYAHQPDFGGFWDATE-----IPTYGTDEWEQWWNAFNEEN 99

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  118 bits (296), Expect = 3e-28
 Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 12/176 (6%)

Query: 38  MIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVL 96
           +      ++YS L V + A+ +EI+ +++KLA K HPD N  +P A   F +I+ AYEVL
Sbjct: 15  IEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVL 74

Query: 97  SDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPF-----ELYSAFFGGSDGLFGGVGEAG 151
            D++ R  YD++GE G+     G   +            +               V    
Sbjct: 75  KDEDLRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGE 134

Query: 152 GINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGI---EVSCFETCDSCGGTGAKS 204
               NF + G+      +DL  ++ E        +    V+C +    C   G  S
Sbjct: 135 LWFVNFYSPGS---SHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNS 187

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  107 bits (269), Expect = 2e-27
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 5/163 (3%)

Query: 240 CGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLF 299
             G  K I    +R   +     +  ++V I PG  +G  +   GEG+ +   +  GDL 
Sbjct: 18  YLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLV 77

Query: 300 VALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSG--VQPGDTV 357
           + +         RD  +L  K+++    A+ G +  V T++  ++L+IP    V P    
Sbjct: 78  LIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDN-RNLQIPIKEIVNPKTRK 136

Query: 358 KLQQMGVPDINNPSVRGDHLFI-VNVLIPKDISDPERALVEEI 399
            +   G+P  N P  +GD L +  ++  PK ++  ++ L++E 
Sbjct: 137 IVPNEGMPIKNQPGQKGD-LILEFDICFPKSLTPEQKKLIKEA 178

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score =  106 bits (266), Expect = 4e-27
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 36  RGMIRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
           + + R         L + ++A   +  ++ +Y K  +++HPD     G EEK K++++ Y
Sbjct: 3   KVLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG---GDEEKMKKMNTLY 59

Query: 94  EVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPF 130
           + + D  K +    FG      E    S        +
Sbjct: 60  KKMEDGVKYAHQPDFGGFWDATEVFASSLNPGVDAIY 96

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  100 bits (252), Expect = 4e-25
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 3/146 (2%)

Query: 254 CGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRD 313
             G      K  + + + PG   G  +  + +G+++ +      L   +         RD
Sbjct: 26  RKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRD 85

Query: 314 GLNLFSKISVDYTEAILGTSMEVETVEGMK-DLRIPSGVQPGDTVKLQQMGVPDINNPSV 372
           G +L   + + + E++LG S  ++T++G    L     VQP  T      G+P   NPS 
Sbjct: 86  GDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQ 145

Query: 373 RGDHLFI-VNVLIPKDISDPERALVE 397
           RG+ L +   V  P  ++D ++  ++
Sbjct: 146 RGN-LIVKYKVDYPISLNDAQKRAID 170

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score = 96.9 bits (242), Expect = 1e-23
 Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 7/166 (4%)

Query: 237 CSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAG 296
            S C    KI         G       + + + +  G   G  +    EG+     ++  
Sbjct: 17  YSGCTKKMKIS-HKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGD-QTSNNIPA 74

Query: 297 DLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSG--VQPG 354
           D+   L         RDG ++     +   EA+ G ++ V T++G + + +     ++PG
Sbjct: 75  DIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDG-RTIPVVFKDVIRPG 133

Query: 355 DTVKLQQMGVPDINNPSVRGDHLFI-VNVLIPKDISDPERALVEEI 399
              K+   G+P    P  RGD L I   V+ P+ I    R ++E++
Sbjct: 134 MRRKVPGEGLPLPKTPEKRGD-LIIEFEVIFPERIPQTSRTVLEQV 178

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 98.6 bits (246), Expect = 3e-22
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%)

Query: 36  RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISS 91
           R + ++   DYY  L V++NA  QEI  +YRKLA ++HPD  ++      AE+KF +I++
Sbjct: 374 RLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAA 433

Query: 92  AYEVLSDDEKRSVYDR 107
           A EVLSD E R  +D 
Sbjct: 434 AKEVLSDPEMRKKFDD 449

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 83.5 bits (206), Expect = 6e-19
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 9/100 (9%)

Query: 44  TDYYSTLNVRQNATL-------QEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
           + +Y          L         ++  YR+L  ++HPD   +    E+   ++ AY  L
Sbjct: 11  STFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPD--MAQQGSEQSSTLNQAYHTL 68

Query: 97  SDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAF 136
            D  +RS Y       I    +  SN     DP  L    
Sbjct: 69  KDPLRRSQYMLKLLRNIDLTQEQTSNEVTTSDPQLLLKVL 108

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79

 Score = 79.6 bits (197), Expect = 1e-18
 Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC 240
           G  + I +   E CD C G+GAK     Q+C  C G G V   Q    G  +   TC  C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHC 56

Query: 241 GGDGKIIIDHCRRCGGNGEVQ 261
            G G +I D C +C G+G V+
Sbjct: 57  QGRGTLIKDPCNKCHGHGRVE 77

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 77.6 bits (192), Expect = 1e-17
 Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 312 RDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPS 371
             G NL   + +   EA LG  + V T++    L +P G Q G  ++++  G+    + +
Sbjct: 9   IVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLV---SKT 65

Query: 372 VRGDHLFIVNVLIPKDISDPERALVEEIA 400
             GD   ++ +++P    +  R L +++A
Sbjct: 66  HTGDLFAVIKIVMPTKPDEKARELWQQLA 94

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 76.5 bits (188), Expect = 1e-16
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 8/71 (11%)

Query: 45  DYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEK------FKEISSAYEVL 96
           DY++   +     L  Q +   ++ L R+YHPD   S    E+         I+ A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 97  SDDEKRSVYDR 107
                R+ Y  
Sbjct: 62  RHPLMRAEYLL 72

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 70.4 bits (172), Expect = 2e-15
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 36  RGMIRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
           R + RA        L + +        ++ +Y++ +   HPD     G+    +E++S +
Sbjct: 3   RVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLW 59

Query: 94  EVLSDDEKRSVYDRFG 109
                +      +  G
Sbjct: 60  GTFKTEVYNLRMNLGG 75

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 71.0 bits (173), Expect = 1e-14
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSD 98
           G   +  + +    T +++K  YRK     HPD          A+  F E++ A+    +
Sbjct: 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 175

Query: 99  DEKRSVY 105
             ++ +Y
Sbjct: 176 QGQKPLY 182

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 60.4 bits (147), Expect = 4e-12
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 45  DYYSTLNVRQNA-TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR 102
           +    LN+ +N  T +++K  +RK+    HPD   SP       +I+ A + L      
Sbjct: 15  EALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP---FLATKINEAKDFLEKRGIS 70

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 62.4 bits (151), Expect = 2e-11
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 45  DYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEK------FKEISSAYEVL 96
           DY+S ++  ++  +   +++  Y++L R  HPD        EK         ++ AY+ L
Sbjct: 44  DYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL 103

Query: 97  SDDEKRSVYD 106
                R +Y 
Sbjct: 104 LAPLSRGLYL 113

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score = 58.4 bits (142), Expect = 9e-11
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 311 HRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSG----VQPGDTVKLQQMGVPD 366
            RDG +L  +  +D   AI G    +E V G   L++       + PG    ++  G+P 
Sbjct: 3   KRDGDDLVYEAEIDLLTAIAGGEFALEHVSG-DWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 367 INNPSVRGDHLFI-VNVLIPKD--ISDPERALVEEI 399
                  G+ L I   +  P++   S+     +EEI
Sbjct: 62  PKYGG-YGN-LIIKFTIKFPENHFTSEENLKKLEEI 95

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 2e-08
 Identities = 59/446 (13%), Positives = 127/446 (28%), Gaps = 111/446 (24%)

Query: 60  EIKTSYRKLARKYHPDINKS---PGAEEKFKEISSAYEV-----LSDDEKR--------- 102
           E +  Y+ +   +      +      ++  K I S  E+       D             
Sbjct: 13  EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72

Query: 103 ----SVYDRFGEAGITGEYDGLSNT--SQGVDPFELYSAFFGGSDGLFGGVGEAGGINFN 156
                +  +F E  +   Y  L +   ++   P  +   +    D L+         N +
Sbjct: 73  SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132

Query: 157 FGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWG 216
                      R   +L   +++   +    V      D   G+G K+   +  C +   
Sbjct: 133 -----------RLQPYLKLRQALLELRPAKNV----LIDGVLGSG-KTWVALDVCLS--- 173

Query: 217 RGGVLKTQRT-PFGL--ISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
                K Q    F +  ++ +  C+      +++     +   N   +S  S        
Sbjct: 174 ----YKVQCKMDFKIFWLN-LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN---IKL 225

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISV-----DYTEA 328
             +    ++R      + +     L V L+V   +    +  NL  KI +       T+ 
Sbjct: 226 RIHSIQAELR---RLLKSKPYENCLLVLLNVQNAKAW--NAFNLSCKILLTTRFKQVTDF 280

Query: 329 ILGTSMEVETVE-------------------GMKDLRIPSGVQPGDTVKLQQMGVPDINN 369
           +   +    +++                     +   +P  V   +  +L  +     + 
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340

Query: 370 PS-------VRGDHL--FI---VNVLIPKDISDPERALVEEIA-FLKS---PGK-----W 408
            +       V  D L   I   +NVL P +     R + + ++ F  S   P       W
Sbjct: 341 LATWDNWKHVNCDKLTTIIESSLNVLEPAEY----RKMFDRLSVFPPSAHIPTILLSLIW 396

Query: 409 HSVSTNSTEAA----QRKSAKVRDWK 430
             V  +          + S   +  K
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPK 422

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 47  YSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEIS-SAYEVLSDDEKRSVY 105
           +  + +        ++ SY++     HPD  +  GA    K ++   +E+L +      +
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQE-----AW 97

Query: 106 DRFGEAG 112
           D F   G
Sbjct: 98  DHFNTLG 104

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 47.7 bits (113), Expect = 3e-07
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSD 98
          G   +  + +    T +++K  YRK     HP           A+  F E++ A+    +
Sbjct: 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	513
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.93
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.91
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.89
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.86
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.84
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.84
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.83
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.83
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.83
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.83
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.82
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.82
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.82
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.82
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.82
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.81
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.81
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.78
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.76
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.75
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.74
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.69
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.69
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.69
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.67
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.67
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.63
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.63
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.62
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.61
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.59
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.59
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.57
2guz_A	71	Mitochondrial import inner membrane translocase su	99.56
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.54
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.46
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.26
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	98.96
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	98.83
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	98.72
2guz_B	65	Mitochondrial import inner membrane translocase su	98.61
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.35
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.32
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.31
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.28
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	97.81
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.46
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	97.37
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	97.28
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.14
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.69
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	96.04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	89.65

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=8.7e-67  Score=536.11  Aligned_cols=288  Identities=27%  Similarity=0.452  Sum_probs=161.6

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCC-
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL-  120 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~-  120 (513)
                      ..+|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|+.||+|+..+..++++++ 
T Consensus        26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~  105 (329)
T 3lz8_A           26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQR  105 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccc
Confidence            3479999999999999999999999999999999998888999999999999999999999999999554322111110 


Q ss_pred             ---CCCCCCCCcccccccccCCCCCCCCCCCCCCCccccCCCCCCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCC
Q 010330          121 ---SNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSC  197 (513)
Q Consensus       121 ---~~~~~g~d~~dlF~~fFgg~~g~fg~~g~~g~~~~~~~~~~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C  197 (513)
                         +.+..+.++.|+|++|||+.  +.+     +     .+..+.+|.|+.++|.|||+|+|+|+++++.+.+.+.|   
T Consensus       106 ~~~~~~f~~~~f~diF~~~Fg~~--g~~-----~-----~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~---  170 (329)
T 3lz8_A          106 QTHEQSYSQQDFDDIFSSMFGQQ--AHQ-----R-----RRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN---  170 (329)
T ss_dssp             -------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC---
T ss_pred             ccccCCcCCCchhhhhHhhhcCc--CCC-----C-----CCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec---
Confidence               11111235678898888642  110     0     01124679999999999999999999999999876432   


Q ss_pred             CCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCC
Q 010330          198 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (513)
Q Consensus       198 ~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G  277 (513)
                                        |.|.                                      ..+++.++++|+||||+++|
T Consensus       171 ------------------g~G~--------------------------------------v~~~~~~~l~V~IP~Gv~~G  194 (329)
T 3lz8_A          171 ------------------VFGM--------------------------------------IESETPKTLNVKIPAGVVDG  194 (329)
T ss_dssp             ------------------SCC---------------------------------------CCEEEEEEEEEEECTTCCTT
T ss_pred             ------------------CCeE--------------------------------------EEEecceEEEEeCCCCCCCC
Confidence                              1121                                      11233568999999999999


Q ss_pred             CEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEE
Q 010330          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTV  357 (513)
Q Consensus       278 ~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~  357 (513)
                      ++|+|+|+|+++.+++.+|||||+|+|++|+.|+|+|+||+++++|+++|||||++++|+||||++.|+||+|+|||+++
T Consensus       195 ~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~  274 (329)
T 3lz8_A          195 QRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRL  274 (329)
T ss_dssp             CEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEE
T ss_pred             CEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEE
Confidence            99999999999877889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHHh-hc
Q 010330          358 KLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIAF-LK  403 (513)
Q Consensus       358 ~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~~-~~  403 (513)
                      +|+|+|||..   +.+|||||+|+|+||++||++|+++|++|++ ..
T Consensus       275 rl~G~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~~~~  318 (329)
T 3lz8_A          275 RIKGKGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA  318 (329)
T ss_dssp             EETTCSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTT
T ss_pred             EEcCCCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence            9999999975   3699999999999999999999999999999 44

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=1.1e-58  Score=459.29  Aligned_cols=233  Identities=24%  Similarity=0.476  Sum_probs=209.3

Q ss_pred             CCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcce-eeeecCCC
Q 010330          161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLI-SQVSTCSK  239 (513)
Q Consensus       161 ~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~-~~~~~C~~  239 (513)
                      +.++.|++++|.|||||||+|+++++.+.+.+.|++|+|+|++++. ..+|+.|+|+|+++..+++++ ++ ++..+|+.
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~   85 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV   85 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence            4679999999999999999999999999999999999999999887 499999999999988888777 44 45679999


Q ss_pred             CCCCcEEE--eeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccc
Q 010330          240 CGGDGKII--IDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNL  317 (513)
Q Consensus       240 C~G~G~~i--~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL  317 (513)
                      |+|+|+++  .+.|..|+|.|++.+.++++|+||||+++|++|+|+|+|+++ +++.+|||||+|++++|+.|+|+|+||
T Consensus        86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~-~~g~~GDl~v~i~v~~h~~F~R~G~DL  164 (248)
T 1nlt_A           86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQA-PDVIPGDVVFIVSERPHKSFKRDGDDL  164 (248)
T ss_dssp             CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCC-TTCBCCCEEEEEEECCCSSCEEETTEE
T ss_pred             CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCC-CCCCcceEEEEEEEecCccceeeCCEE
Confidence            99999999  889999999999999999999999999999999999999986 566899999999999999999999999


Q ss_pred             eEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCC--CCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCC--CChhH
Q 010330          318 FSKISVDYTEAILGTSMEVETVEGM-KDLRIPSG--VQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKD--ISDPE  392 (513)
Q Consensus       318 ~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g--~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~--ls~~q  392 (513)
                      |++++|+|+|||||++++|+||||+ +.|+||+|  +|||++++|+|+|||..+++ .+|||||+|+|+||++  ||++|
T Consensus       165 ~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q  243 (248)
T 1nlt_A          165 VYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEEN  243 (248)
T ss_dssp             EEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC--------
T ss_pred             EEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHH
Confidence            9999999999999999999999996 89999999  99999999999999987665 6899999999999999  99999


Q ss_pred             HHHHH
Q 010330          393 RALVE  397 (513)
Q Consensus       393 r~lLe  397 (513)
                      +++|+
T Consensus       244 ~~~l~  248 (248)
T 1nlt_A          244 LKKLE  248 (248)
T ss_dssp             -----
T ss_pred             HHhhC
Confidence            99885

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=3.5e-45  Score=346.28  Aligned_cols=177  Identities=21%  Similarity=0.380  Sum_probs=159.0

Q ss_pred             CcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCC
Q 010330          164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGD  243 (513)
Q Consensus       164 g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~  243 (513)
                      ++|++++|.|||||||+|+++++.+.+                                                     
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~-----------------------------------------------------   28 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISH-----------------------------------------------------   28 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence            468999999999999999999987653                                                     


Q ss_pred             cEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEec
Q 010330          244 GKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISV  323 (513)
Q Consensus       244 G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~I  323 (513)
                            .|..|+|.|++.+.++++|+||||+++|++|+|+|+|+++. ++.+|||||+|++++|+.|+|+|+||+++++|
T Consensus        29 ------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~I  101 (181)
T 3agx_A           29 ------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARI  101 (181)
T ss_dssp             ------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEE
T ss_pred             ------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEc
Confidence                  24445555556678999999999999999999999999975 67999999999999999999999999999999


Q ss_pred             CHHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHH
Q 010330          324 DYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA  400 (513)
Q Consensus       324 sl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~  400 (513)
                      +++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|++|+
T Consensus       102 sl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~  179 (181)
T 3agx_A          102 SLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL  179 (181)
T ss_dssp             EHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred             CHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            9999999999999999996 8899999999999999999999987666679999999999999999999999999987

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.2e-44  Score=339.40  Aligned_cols=177  Identities=21%  Similarity=0.373  Sum_probs=164.0

Q ss_pred             CCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCC
Q 010330          163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGG  242 (513)
Q Consensus       163 ~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G  242 (513)
                      ++.|++++|.|||||||+|+++++.+.+.+.|+.                                              
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~----------------------------------------------   35 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH----------------------------------------------   35 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence            3679999999999999999999999999888741                                              


Q ss_pred             CcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEe
Q 010330          243 DGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS  322 (513)
Q Consensus       243 ~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~  322 (513)
                                     |++.+.++++|+||||+++|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+|||++++
T Consensus        36 ---------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~  100 (180)
T 2q2g_A           36 ---------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVT  100 (180)
T ss_dssp             ---------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred             ---------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEE
Confidence                           33455789999999999999999999999997678899999999999999999999999999999


Q ss_pred             cCHHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHHHHH
Q 010330          323 VDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVEEIA  400 (513)
Q Consensus       323 Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe~l~  400 (513)
                      |+++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|++|+
T Consensus       101 Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~  179 (180)
T 2q2g_A          101 IPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL  179 (180)
T ss_dssp             EEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred             cCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            99999999999999999996 7899999999999999999999987766689999999999999999999999999986

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=8e-42  Score=320.20  Aligned_cols=169  Identities=21%  Similarity=0.428  Sum_probs=155.2

Q ss_pred             cceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCc
Q 010330          165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDG  244 (513)
Q Consensus       165 ~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  244 (513)
                      +|++++|.|||||||+|+++++.+.+.  |  |                   .                           
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~--~--~-------------------~---------------------------   30 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--G--P-------------------H---------------------------   30 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE--E--T-------------------T---------------------------
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEe--c--C-------------------C---------------------------
Confidence            489999999999999999999999875  1  0                   0                           


Q ss_pred             EEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccceEEEecC
Q 010330          245 KIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVD  324 (513)
Q Consensus       245 ~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~~~~~Is  324 (513)
                                   |.+ +.++++|+||||+.+|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+||+++++|+
T Consensus        31 -------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Is   96 (170)
T 1c3g_A           31 -------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS   96 (170)
T ss_dssp             -------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCB
T ss_pred             -------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcC
Confidence                         112 458899999999999999999999998888899999999999999999999999999999999


Q ss_pred             HHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCCCChhHHHHHH
Q 010330          325 YTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDISDPERALVE  397 (513)
Q Consensus       325 l~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~ls~~qr~lLe  397 (513)
                      ++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus        97 l~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A           97 FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID  170 (170)
T ss_dssp             HHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred             HHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence            999999999999999996 8999999999999999999999987766678999999999999999999999874

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.93  E-value=2.2e-26  Score=200.15  Aligned_cols=96  Identities=22%  Similarity=0.359  Sum_probs=90.7

Q ss_pred             eeccccccccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEc
Q 010330          305 DEKQGIHRDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLI  384 (513)
Q Consensus       305 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~  384 (513)
                      ++|+.|+|+|+||+++++|+|.||++|++++|+|+||.+.|+||+|+|||++++|+|+|||. .+  .+|||||+|+|.|
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~-~~--~~GDL~v~~~V~~   78 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVS-KT--HTGDLFAVIKIVM   78 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBC-SS--CBCCEEEEEEECC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCC-CC--CCcCEEEEEEEEC
Confidence            68999999999999999999999999999999999999999999999999999999999998 32  7999999999999


Q ss_pred             CCCCChhHHHHHHHHHhhc
Q 010330          385 PKDISDPERALVEEIAFLK  403 (513)
Q Consensus       385 P~~ls~~qr~lLe~l~~~~  403 (513)
                      |++||++|+++|++|+++.
T Consensus        79 P~~Ls~~q~~~l~~l~~~~   97 (109)
T 3i38_A           79 PTKPDEKARELWQQLAAAE   97 (109)
T ss_dssp             CSSCCHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999975

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.91  E-value=3e-24  Score=190.09  Aligned_cols=95  Identities=24%  Similarity=0.360  Sum_probs=85.2

Q ss_pred             ccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCC--CCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcC
Q 010330          309 GIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSG--VQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIP  385 (513)
Q Consensus       309 ~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g--~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P  385 (513)
                      .|+|+|+||+++++|+|++|+||+++.|+||||+ +.|+||+|  +|||++++|+|+|||..+++ .+|||||+|+|.||
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            4899999999999999999999999999999997 89999999  99999999999999987665 78999999999999


Q ss_pred             CC--CChhHHHHHHHHHhhcC
Q 010330          386 KD--ISDPERALVEEIAFLKS  404 (513)
Q Consensus       386 ~~--ls~~qr~lLe~l~~~~~  404 (513)
                      +.  |+++|+++|++|+....
T Consensus        80 ~~~~ls~~q~~~l~~l~~~~~  100 (121)
T 1xao_A           80 ENHFTSEENLKKLEEILPPRI  100 (121)
T ss_dssp             CTTCSCHHHHHHHHHHSCCCC
T ss_pred             CCCCCCHHHHHHHHHHccccc
Confidence            99  99999999999997553

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.89  E-value=3.7e-24  Score=184.16  Aligned_cols=97  Identities=42%  Similarity=0.710  Sum_probs=70.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCCccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~~~~~~  121 (513)
                      ..|||+||||+++||.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.||++|++++..+..+++
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~   81 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG   81 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence            4799999999999999999999999999999999984 778999999999999999999999999999998875432111


Q ss_pred             CCCCCCCcccccccccCC
Q 010330          122 NTSQGVDPFELYSAFFGG  139 (513)
Q Consensus       122 ~~~~g~d~~dlF~~fFgg  139 (513)
                      +.+.+.++.++|+.||++
T Consensus        82 ~~~~~~~~~~~f~~~f~~   99 (103)
T 1bq0_A           82 GFGGGADFSDIFGDVFGD   99 (103)
T ss_dssp             ------------------
T ss_pred             CCCCCCCHHHHHHHHHHh
Confidence            111123556778888854

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.86  E-value=2e-22  Score=164.10  Aligned_cols=73  Identities=59%  Similarity=1.041  Sum_probs=69.7

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~  115 (513)
                      ..|||+||||+++||.+|||+|||+|+++||||+++++.+.+.|++|++||++|+||.+|+.||++|++++.+
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   74 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence            4799999999999999999999999999999999988889999999999999999999999999999988764

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=7e-22  Score=165.15  Aligned_cols=75  Identities=48%  Similarity=0.803  Sum_probs=70.3

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCcc
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE  116 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~  116 (513)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||++|+.++.++
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   79 (88)
T 2ctr_A            5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG   79 (88)
T ss_dssp             CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence            347999999999999999999999999999999999988899999999999999999999999999998877644

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.84  E-value=1.9e-21  Score=162.52  Aligned_cols=74  Identities=49%  Similarity=0.850  Sum_probs=69.5

Q ss_pred             ccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccC
Q 010330           39 IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG  112 (513)
Q Consensus        39 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g  112 (513)
                      +.....|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||++|+.+
T Consensus        12 ~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           12 LSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             CCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             hccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            44567899999999999999999999999999999999998889999999999999999999999999999754

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=3.9e-22  Score=171.84  Aligned_cols=103  Identities=30%  Similarity=0.623  Sum_probs=94.9

Q ss_pred             CcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCC
Q 010330          164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGD  243 (513)
Q Consensus       164 g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~  243 (513)
                      |.|++++|.|||||||+|++++|.+.+.+.|+.|+|+|++++....+|+.|+|+|++...+    |+|++..+|+.|+|+
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~   76 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT----GPFVMRSTCRRCGGR   76 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE----TTEEEEEECSSSSSS
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe----CCEEEEEECCcCCCc
Confidence            4678899999999999999999999999999999999999988889999999999887653    668888999999999


Q ss_pred             cEEEeeeeeecCCceEEeeeeEEEEEc
Q 010330          244 GKIIIDHCRRCGGNGEVQSKRSMKVVI  270 (513)
Q Consensus       244 G~~i~~~C~~C~G~G~v~~~k~l~V~I  270 (513)
                      |+++.++|+.|+|.|++++.+.|+|+|
T Consensus        77 G~~i~~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           77 GSIIISPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             SEECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred             ceECCCcCCCCCCeeEEEEEEEEEEEc
Confidence            999999999999999999988888875

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=1.9e-21  Score=158.78  Aligned_cols=72  Identities=49%  Similarity=0.846  Sum_probs=68.0

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCC
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI  113 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~  113 (513)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++.+++.+.|++|++||++|+||.+|+.||++|+.+.
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   76 (78)
T 2ctp_A            5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS   76 (78)
T ss_dssp             CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            357999999999999999999999999999999999888899999999999999999999999999997654

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=3.2e-21  Score=157.67  Aligned_cols=72  Identities=51%  Similarity=0.866  Sum_probs=67.1

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCC
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI  113 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~  113 (513)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++ .+.++++|++|++||++|+||.+|+.||++|..+.
T Consensus         5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   77 (79)
T 2dn9_A            5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS   77 (79)
T ss_dssp             CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence            3579999999999999999999999999999999998 47789999999999999999999999999997654

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.83  E-value=2.2e-21  Score=163.49  Aligned_cols=74  Identities=45%  Similarity=0.700  Sum_probs=67.9

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~  115 (513)
                      |....|||+||||+++|+.+|||+|||+|+++||||+++.  +.++|++|++||++|+||.+|+.||++|++++..
T Consensus         4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   77 (92)
T 2o37_A            4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG--DTEKFKEISEAFEILNDPQKREIYDQYGLEAARS   77 (92)
T ss_dssp             CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC--CHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred             cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence            4567899999999999999999999999999999999953  4679999999999999999999999999887664

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=5.2e-21  Score=157.56  Aligned_cols=72  Identities=49%  Similarity=0.826  Sum_probs=66.8

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~  114 (513)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++..  .++++|++|++||++|+||.+|+.||++|+.++.
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~   81 (82)
T 2ej7_A            8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS   81 (82)
T ss_dssp             SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence            37999999999999999999999999999999999753  6788999999999999999999999999987654

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.82  E-value=5.8e-21  Score=153.96  Aligned_cols=70  Identities=50%  Similarity=0.823  Sum_probs=62.7

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhccccccc
Q 010330           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~  111 (513)
                      |....|||++|||+++|+.+|||+|||+|+++||||++++  +.++|++|++||++|+||.+|+.||++|++
T Consensus         4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            5567899999999999999999999999999999999964  468999999999999999999999999863

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=6e-21  Score=160.68  Aligned_cols=74  Identities=49%  Similarity=0.746  Sum_probs=68.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHHhhccchhhhhcccccccCCCcc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE  116 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~  116 (513)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++..  .++++|++|++||++|+||.+|+.||++|.+++..+
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   83 (92)
T 2dmx_A            8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG   83 (92)
T ss_dssp             CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence            36999999999999999999999999999999999753  678999999999999999999999999998887653

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.82  E-value=5e-21  Score=166.32  Aligned_cols=82  Identities=46%  Similarity=0.790  Sum_probs=73.4

Q ss_pred             ccccccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhccccccc
Q 010330           33 SHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (513)
Q Consensus        33 ~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~  111 (513)
                      .++...+.....|||+||||+++|+.+|||+|||+|+++||||++++ +.+.++|++|++||++|+||.+|+.||++|..
T Consensus         6 s~~~r~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~   85 (109)
T 2ctw_A            6 SGRQRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL   85 (109)
T ss_dssp             CCCCCCTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred             CCCCcccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence            33445566778999999999999999999999999999999999974 67899999999999999999999999999987


Q ss_pred             CCC
Q 010330          112 GIT  114 (513)
Q Consensus       112 g~~  114 (513)
                      ++.
T Consensus        86 ~~~   88 (109)
T 2ctw_A           86 GLY   88 (109)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            654

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=1.1e-20  Score=165.01  Aligned_cols=75  Identities=27%  Similarity=0.548  Sum_probs=69.8

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~  114 (513)
                      +....|||+||||+++|+.+|||+|||+|+++||||+++ ++.++++|++|++||++|+||.+|+.||++|++++.
T Consensus        16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~   91 (112)
T 2ctq_A           16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS   91 (112)
T ss_dssp             CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence            345689999999999999999999999999999999998 578999999999999999999999999999987764

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.81  E-value=1.4e-20  Score=160.67  Aligned_cols=71  Identities=39%  Similarity=0.504  Sum_probs=65.2

Q ss_pred             cccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccc
Q 010330           38 MIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRF  108 (513)
Q Consensus        38 ~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~  108 (513)
                      .-.+...|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||++
T Consensus        11 ~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~   82 (99)
T 2yua_A           11 DCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG   82 (99)
T ss_dssp             CCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred             CCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence            33455689999999999999999999999999999999997 477899999999999999999999999984

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.81  E-value=1.5e-20  Score=160.57  Aligned_cols=72  Identities=50%  Similarity=0.886  Sum_probs=64.6

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~  115 (513)
                      +|||+||||+++|+.+|||+|||+|+++||||+++..  .++++|++|++||++|+||.+|+.||++|.+++.+
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~   75 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG   75 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            6999999999999999999999999999999999753  47899999999999999999999999999887764

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.78  E-value=7.2e-20  Score=154.49  Aligned_cols=70  Identities=31%  Similarity=0.575  Sum_probs=64.2

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-------cchHHHHHHHHHHHHhhccchhhhhcccccc
Q 010330           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-------PGAEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (513)
Q Consensus        41 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-------~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~  110 (513)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++.       +.++++|++|++||++|+||.+|+.||++..
T Consensus        13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            346899999999999999999999999999999999863       4688999999999999999999999998753

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.76  E-value=2.3e-19  Score=171.54  Aligned_cols=73  Identities=42%  Similarity=0.790  Sum_probs=68.6

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccccccCCCcc
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE  116 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~~  116 (513)
                      .|||++|||+++|+.+|||+|||+||++||||+++ ++++.++|++|++||++|+||.+|+.||++|++++...
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~   75 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   75 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence            59999999999999999999999999999999996 57899999999999999999999999999999887643

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.75  E-value=2.5e-19  Score=155.46  Aligned_cols=72  Identities=39%  Similarity=0.597  Sum_probs=66.2

Q ss_pred             cccccCcccccccCCCC-CHHHHHHHHHHHHHHhCCCCCCC----cchHHHHHHHHHHHHhhccchhhhhccccccc
Q 010330           40 RAAGTDYYSTLNVRQNA-TLQEIKTSYRKLARKYHPDINKS----PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (513)
Q Consensus        40 ~~~~~d~Y~iLgv~~~a-s~~eIk~ayr~la~k~HPD~n~~----~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~  111 (513)
                      +....|||+||||+++| |.+|||+|||+|+++||||+++.    +.++++|++|++||++|+||.+|+.||+++..
T Consensus        11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~   87 (109)
T 2qsa_A           11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH   87 (109)
T ss_dssp             TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred             HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence            34468999999999999 99999999999999999999975    56889999999999999999999999998854

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.74  E-value=1.1e-18  Score=146.29  Aligned_cols=64  Identities=33%  Similarity=0.515  Sum_probs=60.8

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhh
Q 010330           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV  104 (513)
Q Consensus        41 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~  104 (513)
                      ....|||+||||+++|+.+|||+|||+||++||||++++++++++|++|++||++|+|+.+|+.
T Consensus        24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence            3468999999999999999999999999999999999988999999999999999999999974

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.69  E-value=1e-17  Score=154.12  Aligned_cols=69  Identities=32%  Similarity=0.562  Sum_probs=63.1

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-------hHHHHHHHHHHHHhhccchhhhhcccccc
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-------AEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~-------a~~~f~~i~~AyevL~d~~kR~~YD~~G~  110 (513)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++.+.       +.++|++|++||++|+||.+|+.||.++.
T Consensus         8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            3579999999999999999999999999999999997542       57899999999999999999999998653

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.69  E-value=8.2e-18  Score=137.73  Aligned_cols=67  Identities=13%  Similarity=0.297  Sum_probs=60.5

Q ss_pred             ccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCC
Q 010330           43 GTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI  113 (513)
Q Consensus        43 ~~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~  113 (513)
                      ..++|++|||+++  ||.+|||+|||+||++||||++.   +.++|++|++||++|+|+.+|+. |.||.+++
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~---~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~~   78 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLR-MNLGGTGF   78 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHT-TCCSSCCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC---CHHHHHHHHHHHHHHhhHHHHHH-HhcCCccC
Confidence            3689999999999  99999999999999999999984   46899999999999999999988 56887654

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.69  E-value=1.9e-18  Score=151.12  Aligned_cols=65  Identities=25%  Similarity=0.422  Sum_probs=61.0

Q ss_pred             ccCcccccccCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccc
Q 010330           43 GTDYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~--~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~  110 (513)
                      ..+||+||||+++|+.  +|||+|||+||++||||++++   +++|++|++||++|+||.+|+.||.||.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            4699999999999999  999999999999999999865   4789999999999999999999999875

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.67  E-value=1.2e-17  Score=139.46  Aligned_cols=70  Identities=21%  Similarity=0.135  Sum_probs=61.2

Q ss_pred             cccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHHhhccchhhhhc
Q 010330           36 RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVY  105 (513)
Q Consensus        36 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--~~a~~~f~~i~~AyevL~d~~kR~~Y  105 (513)
                      .+.......++|+||||+++||.+|||+|||+||++||||+|++  +.++++|++|++||++|+|...|..+
T Consensus         8 ~~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~   79 (88)
T 1iur_A            8 LVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN   79 (88)
T ss_dssp             CCCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred             CCCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            34445566899999999999999999999999999999999986  34889999999999999998887443

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.67  E-value=4e-18  Score=159.02  Aligned_cols=65  Identities=25%  Similarity=0.458  Sum_probs=58.3

Q ss_pred             ccCcccccccCCCCC--HHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccc
Q 010330           43 GTDYYSTLNVRQNAT--LQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as--~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~  110 (513)
                      ..|||++|||+++|+  .+|||+|||+||+++|||++++   +++|++|++||++|+||.+|+.||+||.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            479999999999999  6999999999999999999865   3789999999999999999999999995

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.63  E-value=4.9e-17  Score=136.55  Aligned_cols=74  Identities=22%  Similarity=0.301  Sum_probs=61.8

Q ss_pred             cccccccccCcccccccccCCCCCcccccccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chH
Q 010330            8 SYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP----GAE   83 (513)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~----~a~   83 (513)
                      .+.||+.-|++++..-|..                 .++|++|||+++||.+|||+|||+||++||||+|++.    .|+
T Consensus        14 k~~~ir~lL~~l~~~L~~~-----------------~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~   76 (92)
T 2qwo_B           14 KERNIRALLSTMHTVLWAG-----------------ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAK   76 (92)
T ss_dssp             HTTCHHHHHHHGGGTSCTT-----------------CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHH
T ss_pred             ChhHHHHHHHHHHHHhccc-----------------ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHH
Confidence            4566666666666555522                 4899999999999999999999999999999999853    278


Q ss_pred             HHHHHHHHHHHhhcc
Q 010330           84 EKFKEISSAYEVLSD   98 (513)
Q Consensus        84 ~~f~~i~~AyevL~d   98 (513)
                      ++|++|++||++|.+
T Consensus        77 ~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           77 MIFMELNDAWSEFEN   91 (92)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            899999999999975

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.62  E-value=3.9e-17  Score=184.64  Aligned_cols=86  Identities=37%  Similarity=0.684  Sum_probs=40.9

Q ss_pred             Cccccc-ccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHHhhccchhhhhcccc
Q 010330           31 NRSHRR-GMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRF  108 (513)
Q Consensus        31 ~~~~~~-~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~-~~~a~~~f~~i~~AyevL~d~~kR~~YD~~  108 (513)
                      +++++. ......+.|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||++|+||.+|+.||+|
T Consensus         7 ~~~~~~~~~~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~   86 (780)
T 3apo_A            7 HHHHSSGHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKY   86 (780)
T ss_dssp             ----------------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhh
Confidence            334443 334556789999999999999999999999999999999996 577899999999999999999999999999


Q ss_pred             cccCCCcc
Q 010330          109 GEAGITGE  116 (513)
Q Consensus       109 G~~g~~~~  116 (513)
                      |++++..+
T Consensus        87 ~~~~~~~~   94 (780)
T 3apo_A           87 GEKGLEDN   94 (780)
T ss_dssp             --------
T ss_pred             cccccccC
Confidence            99887654

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.61  E-value=2e-16  Score=148.46  Aligned_cols=62  Identities=21%  Similarity=0.393  Sum_probs=58.6

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHHhhccchhhhhc
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVY  105 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~----a~~~f~~i~~AyevL~d~~kR~~Y  105 (513)
                      .|||++|||+++|+.+|||+|||+||++||||+++...    |+++|++|++||++|+|+.+|+.|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            59999999999999999999999999999999997543    789999999999999999999988

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.59  E-value=3.4e-16  Score=146.35  Aligned_cols=65  Identities=25%  Similarity=0.369  Sum_probs=59.9

Q ss_pred             CcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHHhhccchhhhhccccc
Q 010330           45 DYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (513)
Q Consensus        45 d~Y~iLgv~~~a--s~~eIk~ayr~la~k~HPD~n~~~~------a~~~f~~i~~AyevL~d~~kR~~YD~~G  109 (513)
                      |||++|||+++|  |.++||+|||+|+++||||+++...      +.++|+.|++||++|+||.+|+.||...
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            899999999999  9999999999999999999987532      4579999999999999999999999863

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.59  E-value=5e-16  Score=149.32  Aligned_cols=65  Identities=23%  Similarity=0.433  Sum_probs=59.2

Q ss_pred             ccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHHhhccchhhhhccc
Q 010330           43 GTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        43 ~~d~Y~iLgv~~~--as~~eIk~ayr~la~k~HPD~n~~~~------a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      ..|||++|||+++  ++.++||+|||+|+++||||+++...      +.++|++|++||++|+||.+|+.||.
T Consensus        42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            5799999999987  79999999999999999999987532      56789999999999999999999995

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.57  E-value=4.1e-16  Score=134.61  Aligned_cols=57  Identities=18%  Similarity=0.262  Sum_probs=51.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------chHHHHHHHHHHHHhhccch
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--------GAEEKFKEISSAYEVLSDDE  100 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~--------~a~~~f~~i~~AyevL~d~~  100 (513)
                      +.|||++||++. ||.+|||+|||+||++||||+|+++        .|+++|++|++||++|+|+.
T Consensus        40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            479999999996 9999999999999999999998642        36889999999999999975

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.56  E-value=9.2e-16  Score=122.93  Aligned_cols=58  Identities=22%  Similarity=0.284  Sum_probs=52.6

Q ss_pred             ccCcccccccCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhh
Q 010330           43 GTDYYSTLNVRQ-NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS  103 (513)
Q Consensus        43 ~~d~Y~iLgv~~-~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~  103 (513)
                      ..++|+||||++ +||.+|||+|||+|+++||||++   ++.++|++|++||++|+|+..|+
T Consensus        13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~rk   71 (71)
T 2guz_A           13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGISK   71 (71)
T ss_dssp             HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhcC
Confidence            369999999999 79999999999999999999997   45679999999999999987764

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.54  E-value=1.1e-15  Score=143.96  Aligned_cols=64  Identities=23%  Similarity=0.456  Sum_probs=58.8

Q ss_pred             ccCccccc------ccCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccc
Q 010330           43 GTDYYSTL------NVRQ-NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRF  108 (513)
Q Consensus        43 ~~d~Y~iL------gv~~-~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~  108 (513)
                      .+|||++|      |+++ +||.++||+|||+|+++||||+++.  +.++|++|++||++|+||.+|+.||..
T Consensus        10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~   80 (181)
T 3uo3_A           10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLK   80 (181)
T ss_dssp             SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred             CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence            47999999      4664 8999999999999999999999975  778999999999999999999999984

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.46  E-value=2.4e-14  Score=116.73  Aligned_cols=78  Identities=38%  Similarity=0.856  Sum_probs=68.6

Q ss_pred             eeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEE
Q 010330          181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEV  260 (513)
Q Consensus       181 G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v  260 (513)
                      |++++|.+++.+.|+.|+|+|..+.....+|+.|+|+|.++..+    |+|++..+|+.|+|.|+++.+.|..|+|.|++
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~   76 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCEEeeECcCCCCccEECCCcCCCCCCeEEE
Confidence            45667888999999999999998877778999999999987643    77887789999999999999999999999987


Q ss_pred             ee
Q 010330          261 QS  262 (513)
Q Consensus       261 ~~  262 (513)
                      .+
T Consensus        77 ~~   78 (79)
T 1exk_A           77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ee
Confidence            53

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.26  E-value=8e-12  Score=123.31  Aligned_cols=64  Identities=22%  Similarity=0.370  Sum_probs=45.7

Q ss_pred             cCCceEEee--eeEEEEEcCCC--CcCCCEEEEccccccCCCCCCCccEEEEEEEeeccc--cccccccc
Q 010330          254 CGGNGEVQS--KRSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQG--IHRDGLNL  317 (513)
Q Consensus       254 C~G~G~v~~--~k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~--F~R~G~DL  317 (513)
                      |+++-.++.  .+.++|.||+|  +++|++++|+|+|++...+...|||||+|+|.-+..  +..+...|
T Consensus       177 lG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~  246 (248)
T 1nlt_A          177 AGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK  246 (248)
T ss_dssp             HCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred             cCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence            466766765  34799999999  999999999999998644335799999999998776  65544443

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=98.96  E-value=3.3e-10  Score=116.26  Aligned_cols=65  Identities=49%  Similarity=0.714  Sum_probs=56.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chHHHHHHHHHHHHhhccchhhhhccc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~----~a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      ..++|.+||+.+.++.+||+++|+++++++|||+.+.+    .++++|++|.+||++|+|+++|+.||+
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            35999999999999999999999999999999998764    388999999999999999999999996

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=98.83  E-value=1.3e-09  Score=94.30  Aligned_cols=52  Identities=25%  Similarity=0.555  Sum_probs=43.2

Q ss_pred             EEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeeccccccccccce
Q 010330          265 SMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLF  318 (513)
Q Consensus       265 ~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~F~R~G~DL~  318 (513)
                      .++|.||+|+++|++++++|+|++. .+ .+|||||+|+|.-+..+..+..+++
T Consensus        39 ~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~Ls~~q~~~l   90 (109)
T 3i38_A           39 SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKPDEKARELW   90 (109)
T ss_dssp             CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSCCHHHHHHH
T ss_pred             CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCCCHHHHHHH
Confidence            3689999999999999999999986 33 7999999999998887665544443

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=98.72  E-value=5.4e-09  Score=92.04  Aligned_cols=55  Identities=22%  Similarity=0.332  Sum_probs=41.3

Q ss_pred             eEEEEEcCCC--CcCCCEEEEccccccCCCCCCCccEEEEEEEeeccc--cccccccce
Q 010330          264 RSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQG--IHRDGLNLF  318 (513)
Q Consensus       264 k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~~--F~R~G~DL~  318 (513)
                      +.++|+||+|  +++|++++++|+|++...+...|||||+++|.-+..  +..+..+++
T Consensus        34 ~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l   92 (121)
T 1xao_A           34 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKL   92 (121)
T ss_dssp             CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHH
T ss_pred             CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHH
Confidence            3578999999  999999999999998644436799999999998776  655554443

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.61  E-value=2.6e-08  Score=78.03  Aligned_cols=52  Identities=15%  Similarity=0.183  Sum_probs=46.5

Q ss_pred             CcccccccCCC---CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccc
Q 010330           45 DYYSTLNVRQN---ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDD   99 (513)
Q Consensus        45 d~Y~iLgv~~~---as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~   99 (513)
                      +-|.||||+++   ++.++|++|||+|....|||+.   +......+|++|++.|...
T Consensus         5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHHH
Confidence            55889999999   9999999999999999999996   5667788999999999754

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.35  E-value=3.6e-07  Score=93.49  Aligned_cols=73  Identities=22%  Similarity=0.399  Sum_probs=51.3

Q ss_pred             ccccceEEEecCHHHHhcCCeeEEecc------CC--------cEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEE
Q 010330          313 DGLNLFSKISVDYTEAILGTSMEVETV------EG--------MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLF  378 (513)
Q Consensus       313 ~G~DL~~~~~Isl~eAllG~~v~V~tl------dG--------~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V  378 (513)
                      .|.||.+++.|+|.||..|++..|..-      .|        .++|+||+|+++|++++++|+|.|...+ +.+|||||
T Consensus       139 ~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL~v  217 (329)
T 3lz8_A          139 RGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDLWL  217 (329)
T ss_dssp             CCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEEE
T ss_pred             CCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcEEE
Confidence            455666666666666666655444321      22        3678999999999999999999986543 46899999


Q ss_pred             EEEEEcCC
Q 010330          379 IVNVLIPK  386 (513)
Q Consensus       379 ~f~V~~P~  386 (513)
                      +++|.-..
T Consensus       218 ~I~v~~h~  225 (329)
T 3lz8_A          218 VIHIAPHP  225 (329)
T ss_dssp             EECCCCCS
T ss_pred             EEEEecCC
Confidence            99887543

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.32  E-value=8.6e-07  Score=82.35  Aligned_cols=71  Identities=13%  Similarity=0.259  Sum_probs=58.2

Q ss_pred             cceEEEecCHHHHhcCCeeEEecc----CC-----cEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCC
Q 010330          316 NLFSKISVDYTEAILGTSMEVETV----EG-----MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPK  386 (513)
Q Consensus       316 DL~~~~~Isl~eAllG~~v~V~tl----dG-----~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~  386 (513)
                      |+.+++.|||.||+.|++.+|.--    .|     .++|+||+|+..|++++++|+|-|...+ +..|||||+++|.-..
T Consensus         2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g-g~~GDl~v~i~v~~h~   80 (170)
T 1c3g_A            2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEKSHP   80 (170)
T ss_dssp             EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEECCCS
T ss_pred             CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCC-CccccEEEEEEEccCC
Confidence            789999999999999999887632    23     3689999999999999999999864332 4689999999997544


Q ss_pred             C
Q 010330          387 D  387 (513)
Q Consensus       387 ~  387 (513)
                      .
T Consensus        81 ~   81 (170)
T 1c3g_A           81 N   81 (170)
T ss_dssp             S
T ss_pred             c
Confidence            3

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.31  E-value=1.1e-06  Score=82.51  Aligned_cols=74  Identities=16%  Similarity=0.240  Sum_probs=59.0

Q ss_pred             cccceEEEecCHHHHhcCCeeEEecc------------CCcEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEE
Q 010330          314 GLNLFSKISVDYTEAILGTSMEVETV------------EGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVN  381 (513)
Q Consensus       314 G~DL~~~~~Isl~eAllG~~v~V~tl------------dG~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~  381 (513)
                      +.|+.+++.|||.||+.|++.+|.--            .-.++|+||+|+..|++++++|+|-+... .+..|||||+++
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~-gg~~GDl~v~i~   81 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESP-GTSPGDLVLIIQ   81 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSST-TSCCCEEEEEEE
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCC-CCccccEEEEEE
Confidence            67999999999999999998877632            12368899999999999999999987322 246899999999


Q ss_pred             EEcCCCC
Q 010330          382 VLIPKDI  388 (513)
Q Consensus       382 V~~P~~l  388 (513)
                      |.-...+
T Consensus        82 ~~~h~~F   88 (180)
T 2q2g_A           82 TKTHPRF   88 (180)
T ss_dssp             ECCCSSC
T ss_pred             EEecccE
Confidence            9754433

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.28  E-value=1.3e-06  Score=81.96  Aligned_cols=73  Identities=14%  Similarity=0.267  Sum_probs=57.1

Q ss_pred             cccceEEEecCHHHHhcCCeeEEec------cCC--------cEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEE
Q 010330          314 GLNLFSKISVDYTEAILGTSMEVET------VEG--------MKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFI  379 (513)
Q Consensus       314 G~DL~~~~~Isl~eAllG~~v~V~t------ldG--------~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~  379 (513)
                      +.|+.+++.|||.||+.|++.+|.-      -.|        .++|+||+|+..|++++++|+|-+..+  +..|||||+
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~--g~~GDl~v~   79 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN--NIPADIVFV   79 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS--SCCCCEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC--CCcccEEEE
Confidence            5689999999999999999887752      234        157899999999999999999988653  468999999


Q ss_pred             EEEEcCCCC
Q 010330          380 VNVLIPKDI  388 (513)
Q Consensus       380 f~V~~P~~l  388 (513)
                      ++|.-...+
T Consensus        80 i~~~~h~~F   88 (181)
T 3agx_A           80 LKDKPHNIF   88 (181)
T ss_dssp             EEECCCSSC
T ss_pred             EEEeccccc
Confidence            999754443

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=97.81  E-value=2.7e-07  Score=101.97  Aligned_cols=78  Identities=18%  Similarity=0.326  Sum_probs=59.5

Q ss_pred             eEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCccccc---ccccCcccCcccEEEEE--------eecCCcce-eeee
Q 010330          168 RYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSN---CIQSCKACWGRGGVLKT--------QRTPFGLI-SQVS  235 (513)
Q Consensus       168 ~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~---~~~~C~~C~G~G~~~~~--------~~~~~g~~-~~~~  235 (513)
                      .+++.|+|+|+++|.++++++.+.+.|..|+|+|++.+.   .+.+|+.|+|+......        ...-.|.| +...
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~  247 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS  247 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence            367889999999999999999999999999999999887   67899999999421100        00111333 3346


Q ss_pred             cCCCCCCCcE
Q 010330          236 TCSKCGGDGK  245 (513)
Q Consensus       236 ~C~~C~G~G~  245 (513)
                      .|..|+..+.
T Consensus       248 ~C~~CH~~~~  257 (669)
T 3pmq_A          248 NCQTCHADNP  257 (669)
T ss_dssp             CCTTTSCCCT
T ss_pred             cchhhcCCcc
Confidence            7999998775

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.46  E-value=2.6e-05  Score=58.38  Aligned_cols=30  Identities=30%  Similarity=0.798  Sum_probs=26.0

Q ss_pred             eecCCCCCCCcEEEeeeeeecCCceEEeee
Q 010330          234 VSTCSKCGGDGKIIIDHCRRCGGNGEVQSK  263 (513)
Q Consensus       234 ~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~  263 (513)
                      ..+|+.|+|+|+++.++|+.|+|.|++.+.
T Consensus         9 ~~~C~~C~GsG~~i~~~C~~C~G~G~v~~~   38 (53)
T 3lcz_A            9 ETTCPNCNGSGREEPEPCPKCLGKGVILTA   38 (53)
T ss_dssp             EEECTTTTTSCEETTEECTTTTTSSEEECH
T ss_pred             eccCcCCcccccCCCCcCCCCCCcEEEEEE
Confidence            478999999999999999999999987653

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=97.37  E-value=9e-05  Score=59.59  Aligned_cols=47  Identities=30%  Similarity=0.800  Sum_probs=37.2

Q ss_pred             cccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe--------eeeeecCCceEEe
Q 010330          206 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--------DHCRRCGGNGEVQ  261 (513)
Q Consensus       206 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~  261 (513)
                      .....|+.|+|+|...         .....+|+.|+|+|+++.        ..|+.|+|.|.+.
T Consensus         9 ~~~~~C~~C~G~G~~~---------~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~   63 (79)
T 1exk_A            9 PTLEECDVCHGSGAKP---------GTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI   63 (79)
T ss_dssp             CCEEECGGGTTTSBCS---------SSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC
T ss_pred             ccceECCCCcccccCC---------CccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC
Confidence            3567999999999642         122468999999999875        4799999999764

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.28  E-value=9.1e-05  Score=62.99  Aligned_cols=47  Identities=32%  Similarity=0.820  Sum_probs=36.7

Q ss_pred             eeeccCCCCCCcccc-----cccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEee
Q 010330          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID  249 (513)
Q Consensus       191 ~~~C~~C~GtG~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~  249 (513)
                      ...|+.|+|+|....     ....+|+.|+|+|.++.            .+|+.|+|.|.+...
T Consensus        45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~   96 (104)
T 2ctt_A           45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII------------SPCVVCRGAGQAKQK   96 (104)
T ss_dssp             CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS------------SCCSSSSSCSEECCC
T ss_pred             CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC------------CcCCCCCCeeEEEEE
Confidence            467999999996521     13468999999998752            579999999988543

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.14  E-value=4.4e-05  Score=57.19  Aligned_cols=36  Identities=31%  Similarity=0.671  Sum_probs=22.3

Q ss_pred             eeccCCCCCCcccccccccCcccCcccEEEEEe-ecCCcc
Q 010330          192 ETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ-RTPFGL  230 (513)
Q Consensus       192 ~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~-~~~~g~  230 (513)
                      ..|+.|+|+|....   .+|+.|+|+|+++..+ ++.+|+
T Consensus        10 ~~C~~C~GsG~~~~---~~C~~C~G~G~v~~~qG~~~~g~   46 (53)
T 2bx9_A           10 VACPKCERAGEIEG---TPCPACSGKGVILTAQGYTLLDF   46 (53)
T ss_dssp             EECTTTTTSSEETT---EECTTTTTSSEEECHHHHHHHHH
T ss_pred             ccCCCCcceeccCC---CCCccCCCCccEEEEecccHHHH
Confidence            46777777777642   5677777777765544 334443

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.69  E-value=0.00059  Score=50.99  Aligned_cols=27  Identities=33%  Similarity=0.779  Sum_probs=14.2

Q ss_pred             ecCCCCCCCcEEEeeeeeecCCceEEe
Q 010330          235 STCSKCGGDGKIIIDHCRRCGGNGEVQ  261 (513)
Q Consensus       235 ~~C~~C~G~G~~i~~~C~~C~G~G~v~  261 (513)
                      .+|+.|+|+|.++...|+.|+|.|.+.
T Consensus        10 ~~C~~C~GsG~~~~~~C~~C~G~G~v~   36 (53)
T 2bx9_A           10 VACPKCERAGEIEGTPCPACSGKGVIL   36 (53)
T ss_dssp             EECTTTTTSSEETTEECTTTTTSSEEE
T ss_pred             ccCCCCcceeccCCCCCccCCCCccEE
Confidence            345555555555555555555555443

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=96.04  E-value=0.0034  Score=46.84  Aligned_cols=26  Identities=35%  Similarity=1.038  Sum_probs=12.6

Q ss_pred             eeccCCCCCCcccccccccCcccCcccEE
Q 010330          192 ETCDSCGGTGAKSSNCIQSCKACWGRGGV  220 (513)
Q Consensus       192 ~~C~~C~GtG~~~~~~~~~C~~C~G~G~~  220 (513)
                      .+|+.|+|+|....   ..|+.|+|+|.+
T Consensus        10 ~~C~~C~GsG~~i~---~~C~~C~G~G~v   35 (53)
T 3lcz_A           10 TTCPNCNGSGREEP---EPCPKCLGKGVI   35 (53)
T ss_dssp             EECTTTTTSCEETT---EECTTTTTSSEE
T ss_pred             ccCcCCcccccCCC---CcCCCCCCcEEE
Confidence            34555555554432   345555555543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=89.65  E-value=0.16  Score=56.11  Aligned_cols=50  Identities=16%  Similarity=0.195  Sum_probs=39.6

Q ss_pred             ccccccCcccccccCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHh
Q 010330           39 IRAAGTDYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEV   95 (513)
Q Consensus        39 ~~~~~~d~Y~iLgv~~~as~--~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~Ayev   95 (513)
                      +....+|||.+||++.++..  .+|++|||+||+..+++       ++++..+..|+.|
T Consensus       624 ~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          624 LKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV  675 (681)
T ss_dssp             HTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred             HHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence            34556789999999776655  77999999999975444       4788888888876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	513
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	1e-21
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	3e-21
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	3e-17
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	4e-17
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	2e-16
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	6e-16
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	2e-15
d1exka_	79	g.54.1.1 (A:) Cysteine-rich domain of the chaperon	4e-15
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	6e-15
d1nlta3	74	g.54.1.1 (A:139-212) Mitochondrial protein import	4e-14
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	3e-13
d1m1qa_	90	a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum	5e-13
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	1e-11
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	7e-09
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	8e-07

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 86.6 bits (214), Expect = 1e-21
 Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDE 100
           A  DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60

Query: 101 KRSVYDRFGEAGI 113
           KR+ YD++G A  
Sbjct: 61  KRAAYDQYGHAAF 73

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 3e-21
 Identities = 43/74 (58%), Positives = 56/74 (75%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR 102
           G DYY TL + + A+ +EIK +YR+ A +YHPD NK PGAEEKFKEI+ AY+VLSD  KR
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR 61

Query: 103 SVYDRFGEAGITGE 116
            ++DR+GE G+ G 
Sbjct: 62  EIFDRYGEEGLKGS 75

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.1 bits (184), Expect = 3e-17
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEK--- 85
           G++ S    + +    D+YS L    +A + ++K  Y+KL   YHPD   +         
Sbjct: 1   GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEE 60

Query: 86  ----FKEISSAYEVLSDDEKRSVYDRFGEAGITG 115
               F EI  A+++L ++E +  YD       +G
Sbjct: 61  CMQKFIEIDQAWKILGNEETKKKYDLQRSGPSSG 94

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 73.9 bits (181), Expect = 4e-17
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 8/70 (11%)

Query: 45  DYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEK------FKEISSAYEVL 96
           DY++   +     L  Q +   ++ L R+YHPD   S    E+         I+ A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 97  SDDEKRSVYD 106
                R+ Y 
Sbjct: 62  RHPLMRAEYL 71

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 72.7 bits (178), Expect = 2e-16
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGA----EEKFKEISSAYEVLSD 98
           G   +  + +    T +++K  YRK     HPD           +  F E++ A+    +
Sbjct: 32  GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 91

Query: 99  DEKRSVY 105
             ++ +Y
Sbjct: 92  QGQKPLY 98

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 70.4 bits (172), Expect = 6e-16
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 36  RGMIRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
           R + RA        L + +        ++ +Y++ +   HPD     G+    +E++S +
Sbjct: 3   RVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLW 59

Query: 94  EVLSDDEKRSVYDRFG 109
                +      +  G
Sbjct: 60  GTFKTEVYNLRMNLGG 75

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 2e-15
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKR 102
           +  S +         E K   R+L  K+HPD N      A E FK + +    L   EK+
Sbjct: 17  EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73

Query: 103 SVYDRFGEAG 112
           +  D+  +  
Sbjct: 74  AFLDQNADRA 83

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

 Score = 68.2 bits (166), Expect = 4e-15
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC 240
           G  + I +   E CD C G+GAK     Q+C  C G        +   G  +   TC  C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGS----GQVQMRQGFFAVQQTCPHC 56

Query: 241 GGDGKIIIDHCRRCGGNGEVQ 261
            G G +I D C +C G+G V+
Sbjct: 57  QGRGTLIKDPCNKCHGHGRVE 77

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.1 bits (166), Expect = 6e-15
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 312 RDGLNLFSKISVDYTEAILGTSMEVETVEGMKD-LRIPSGVQPGDTVKLQQMGVPDINNP 370
           RDG +L   + + + E++LG S  ++T++G    L     VQP  T      G+P   NP
Sbjct: 4   RDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNP 63

Query: 371 SVRGDHLFIVNVLIPKDISDPERALVE 397
           S RG+ +    V  P  ++D ++  ++
Sbjct: 64  SQRGNLIVKYKVDYPISLNDAQKRAID 90

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.5 bits (159), Expect = 4e-14
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 193 TCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--DH 250
            C  C G G K    ++ C +C G+G    T++    +    + C  C G G II   D 
Sbjct: 4   LCKECEGRGGKK-GAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDR 62

Query: 251 CRRCGGNGEVQ 261
           C+ C G     
Sbjct: 63  CKSCNGKKVEN 73

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 64.0 bits (155), Expect = 3e-13
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 10/105 (9%)

Query: 39  IRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
           +R         L + ++A   +  ++ +Y K  +++HPD        EK K++++ Y+ +
Sbjct: 3   MREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKM 59

Query: 97  SDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSD 141
            D  K +    FG       +D     + G D +E +   F   +
Sbjct: 60  EDGVKYAHQPDFGG-----FWDATEIPTYGTDEWEQWWNAFNEEN 99

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 62.5 bits (151), Expect = 5e-13
 Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 3/75 (4%)

Query: 192 ETCDSCGGTGAKSSNCI---QSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII 248
             C+SC   G  S++       C++C G+   +     P       + C           
Sbjct: 12  GGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQK 71

Query: 249 DHCRRCGGNGEVQSK 263
             C  C  +G   + 
Sbjct: 72  PTCESCHDDGRTSAS 86

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.4 bits (141), Expect = 1e-11
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 312 RDGLNLFSKISVDYTEAILGTSMEVETVEGM---KDLRIPSGVQPGDTVKLQQMGVPDIN 368
           RDG +L  +  +D   AI G    +E V G      +     + PG    ++  G+P   
Sbjct: 4   RDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPK 63

Query: 369 NPSVRGDHLFIVNVLIPK 386
                G+ +    +  P+
Sbjct: 64  YGG-YGNLIIKFTIKDPE 80

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.3 bits (120), Expect = 7e-09
 Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 240 CGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLF 299
             G  K      +   G  E   K  + + + PG   G  +  + +G+++ +      L 
Sbjct: 15  FVGKKKSFKIGRKGPHGASE---KTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQ 71

Query: 300 VALHVDE 306
             +    
Sbjct: 72  FVIQEKS 78

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.7 bits (105), Expect = 8e-07
 Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 312 RDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPS 371
           + G ++  +IS    E   G + ++     + ++ +  G++ G  +  +       +   
Sbjct: 2   QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDVI- 60

Query: 372 VRGDHLFIVNV 382
             GD +FIV+ 
Sbjct: 61  -PGDVVFIVSE 70

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	513
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.91
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.88
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.8
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.79
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.78
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.67
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.63
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.62
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.62
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.61
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.56
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.56
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.43
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.31
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.69
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	98.64
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.57
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	97.45
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	97.28
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.06

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=4.7e-25  Score=183.34  Aligned_cols=89  Identities=28%  Similarity=0.505  Sum_probs=85.0

Q ss_pred             ccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcCCC
Q 010330          309 GIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKD  387 (513)
Q Consensus       309 ~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P~~  387 (513)
                      .|+|+|+||+++++|++.||++|++++|+|+||+ +.|+||++++||++++|+|+|||..+.++.+|||||+|+|.+|++
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~   80 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS   80 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCC
Confidence            4899999999999999999999999999999996 689999999999999999999999887778999999999999999


Q ss_pred             CChhHHHHHH
Q 010330          388 ISDPERALVE  397 (513)
Q Consensus       388 ls~~qr~lLe  397 (513)
                      ||++|+++||
T Consensus        81 ls~~qk~~lE   90 (90)
T d1c3ga2          81 LNDAQKRAID   90 (90)
T ss_dssp             CCTTHHHHTC
T ss_pred             CCHHHHHhhC
Confidence            9999999885

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.1e-23  Score=169.21  Aligned_cols=73  Identities=51%  Similarity=0.859  Sum_probs=67.8

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHHhhccchhhhhcccccccCCC
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~  114 (513)
                      +.+|||+||||+++||.+|||+|||+|+++||||+|+. +.+++.|++|++||+||+||.+|+.||+||+.++.
T Consensus         1 ak~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e   74 (75)
T d1xbla_           1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (75)
T ss_dssp             CCCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred             CCCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence            35899999999999999999999999999999999974 66788999999999999999999999999988764

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2e-23  Score=168.41  Aligned_cols=73  Identities=59%  Similarity=1.041  Sum_probs=70.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCCCc
Q 010330           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (513)
Q Consensus        43 ~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~~~  115 (513)
                      .+|||+||||+++||.+||++||++|++++|||+++++.+.++|+.|++||+||+||.+|+.||+||++++++
T Consensus         2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g   74 (77)
T d1hdja_           2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcC
Confidence            4799999999999999999999999999999999998899999999999999999999999999999998864

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=2.5e-20  Score=151.08  Aligned_cols=77  Identities=25%  Similarity=0.393  Sum_probs=71.4

Q ss_pred             ccccccccceEEEecCHHHHhcCCeeEEeccCCc-EEEEeCCC--CCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEEcC
Q 010330          309 GIHRDGLNLFSKISVDYTEAILGTSMEVETVEGM-KDLRIPSG--VQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIP  385 (513)
Q Consensus       309 ~F~R~G~DL~~~~~Isl~eAllG~~v~V~tldG~-~~l~Ip~g--~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~~P  385 (513)
                      .|+|+|+||+++++|++.||++|++++|+|+||. +.++||++  +++|++++|+|+|||..+. +.+|||||+|+|++|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKY-GGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSS-CSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCCc-CCcCcEEEEEEEEcC
Confidence            4899999999999999999999999999999996 57788876  9999999999999999865 579999999999999


Q ss_pred             C
Q 010330          386 K  386 (513)
Q Consensus       386 ~  386 (513)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=2.1e-20  Score=156.14  Aligned_cols=68  Identities=32%  Similarity=0.588  Sum_probs=62.5

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-------cchHHHHHHHHHHHHhhccchhhhhccccc
Q 010330           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-------PGAEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (513)
Q Consensus        42 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~-------~~a~~~f~~i~~AyevL~d~~kR~~YD~~G  109 (513)
                      +.+|||+||||+++|+.+|||+||++|+++||||+|+.       +.++++|+.|++||+||+||.+|+.||+..
T Consensus        14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~   88 (94)
T d1wjza_          14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence            45899999999999999999999999999999999864       347888999999999999999999999864

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.78  E-value=1.9e-20  Score=161.87  Aligned_cols=68  Identities=22%  Similarity=0.388  Sum_probs=62.3

Q ss_pred             ccCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhcccccccCC
Q 010330           43 GTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI  113 (513)
Q Consensus        43 ~~d~Y~iLgv~~~a--s~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g~  113 (513)
                      ..|||+||||+++|  +.++||+|||+||++||||+|+++   ++|++|++||+||+|+.+|+.||.+|....
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~---e~F~~I~~AY~vLsd~~kR~~YD~~~~~~~   76 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGGFWD   76 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT---TTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhH---HHHHHHHHHHHHhCCHHHHHHHhccCCCCc
Confidence            47999999999999  788999999999999999999754   689999999999999999999999887543

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.67  E-value=8.8e-18  Score=135.30  Aligned_cols=64  Identities=13%  Similarity=0.239  Sum_probs=58.9

Q ss_pred             ccCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHhhccchhhhhccccc
Q 010330           43 GTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (513)
Q Consensus        43 ~~d~Y~iLgv~~~a--s~~eIk~ayr~la~k~HPD~n~~~~a~~~f~~i~~AyevL~d~~kR~~YD~~G  109 (513)
                      ..+||+||||+++|  |.+|||+|||+|+++||||++.   ++++|++|++||++|+|+.+|..||..+
T Consensus        10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g---~~e~~~~in~Ay~~L~d~~~r~~~~~~~   75 (79)
T d1fafa_          10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLRMNLGG   75 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCC---CHHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence            46999999999998  9999999999999999999984   4579999999999999999999999743

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.2e-17  Score=132.93  Aligned_cols=66  Identities=26%  Similarity=0.314  Sum_probs=58.8

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHHhhccchhhhhcccccccC
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG  112 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~--~~a~~~f~~i~~AyevL~d~~kR~~YD~~G~~g  112 (513)
                      +|+|+||+|+.+||.+|||+|||+|+++||||+|++  ..|+++|++|++||++|+   +++.||++....
T Consensus        16 ~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~~~   83 (88)
T d1iura_          16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNADRA   83 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSSCS
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccchHh
Confidence            699999999999999999999999999999999985  357899999999999996   467888766543

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=6.6e-17  Score=129.38  Aligned_cols=63  Identities=25%  Similarity=0.419  Sum_probs=56.1

Q ss_pred             CcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHHhhccchhhhhccc
Q 010330           45 DYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (513)
Q Consensus        45 d~Y~iLgv~~~a--s~~eIk~ayr~la~k~HPD~n~~~------~a~~~f~~i~~AyevL~d~~kR~~YD~  107 (513)
                      |||++|||++++  +.+|||+|||+++++||||+....      .+.+.|+.|++||+||+||.+|+.|+.
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            899999999864  589999999999999999997532      267789999999999999999999974

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=3.6e-16  Score=126.25  Aligned_cols=80  Identities=14%  Similarity=0.346  Sum_probs=67.8

Q ss_pred             cceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCc
Q 010330          165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDG  244 (513)
Q Consensus       165 ~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  244 (513)
                      +||+++|.|||||+|+|+++++.+.+..    |                 .|                            
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~----~-----------------~g----------------------------   31 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P-----------------HG----------------------------   31 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------TT----------------------------
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceec----c-----------------cC----------------------------
Confidence            4789999999999999999998876431    1                 11                            


Q ss_pred             EEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeecc
Q 010330          245 KIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ  308 (513)
Q Consensus       245 ~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~  308 (513)
                                  .+   +.++++|.||||+++|++|+|+|+|++...++.+|||+|+|++++||
T Consensus        32 ------------~~---~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          32 ------------AS---EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             ------------EE---EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             ------------CC---ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence                        11   24679999999999999999999999987778899999999999997

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.61  E-value=1e-16  Score=134.32  Aligned_cols=62  Identities=21%  Similarity=0.393  Sum_probs=57.7

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHHhhccchhhhhc
Q 010330           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVY  105 (513)
Q Consensus        44 ~d~Y~iLgv~~~as~~eIk~ayr~la~k~HPD~n~~~~----a~~~f~~i~~AyevL~d~~kR~~Y  105 (513)
                      .++|++|||+..||.+|||+|||+++++||||+++++.    +++.|+.|++||++|+||.+|+.|
T Consensus        33 ~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             CCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             ccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            57899999999999999999999999999999887543    678999999999999999999998

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.56  E-value=2.7e-15  Score=119.29  Aligned_cols=74  Identities=20%  Similarity=0.422  Sum_probs=65.5

Q ss_pred             CCCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCC
Q 010330          161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC  240 (513)
Q Consensus       161 ~~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  240 (513)
                      +.++.|++++|.|||+|||+|+++++.+.                                                   
T Consensus         1 Prkg~di~~~l~isleea~~G~~~~~~~~---------------------------------------------------   29 (74)
T d1nlta1           1 PQRGKDIKHEISASLEELYKGRTAKLALN---------------------------------------------------   29 (74)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEE---------------------------------------------------
T ss_pred             CCCCCCEEEEEEecHHHHHhhcccceeec---------------------------------------------------
Confidence            35789999999999999999999876543                                                   


Q ss_pred             CCCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCCCCCCCccEEEEEEEeecc
Q 010330          241 GGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ  308 (513)
Q Consensus       241 ~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h~  308 (513)
                                            .+.++|+||+|+.+|++|+|+|+|++.+ ++.+|||+|+|++++|.
T Consensus        30 ----------------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~-~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          30 ----------------------RKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             ----------------------EEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCS
T ss_pred             ----------------------CccEEEEecccccCCeEEEecCCcCCCC-CCCCCCEEEEEEecCCC
Confidence                                  2568899999999999999999999964 67899999999999995

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=5.1e-16  Score=125.09  Aligned_cols=78  Identities=37%  Similarity=0.830  Sum_probs=69.8

Q ss_pred             eeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEE
Q 010330          181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEV  260 (513)
Q Consensus       181 G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v  260 (513)
                      |++++|.|++.+.|+.|+|+|+.++..+.+|+.|+|+|++..    .+|++++.++|+.|+|+|++|.++|..|+|.|+|
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~----~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v   76 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQM----RQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEE----EETTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEE----ecccceeeEECcccCcceeECCCCCCCCCCceEe
Confidence            567788999999999999999999888899999999998743    3477888889999999999999999999999988


Q ss_pred             ee
Q 010330          261 QS  262 (513)
Q Consensus       261 ~~  262 (513)
                      ++
T Consensus        77 ~k   78 (79)
T d1exka_          77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ec
Confidence            64

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=5.4e-14  Score=111.60  Aligned_cols=72  Identities=28%  Similarity=0.609  Sum_probs=63.5

Q ss_pred             eeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe--eeeeecCCceEEee
Q 010330          190 CFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--DHCRRCGGNGEVQS  262 (513)
Q Consensus       190 r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~--~~C~~C~G~G~v~~  262 (513)
                      |.++|+.|+|+|+..+. ..+|+.|+|+|+++...+++++++++..+|+.|+|+|+++.  ++|..|+|.|++++
T Consensus         1 r~v~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           1 KQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             CccCCcCCcccccCCCC-CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            56899999999998764 57899999999999988888887777889999999999875  47999999998764

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.31  E-value=1.8e-12  Score=102.59  Aligned_cols=70  Identities=17%  Similarity=0.323  Sum_probs=64.1

Q ss_pred             cccccceEEEecCHHHHhcCCeeEEeccCCcEEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEE
Q 010330          312 RDGLNLFSKISVDYTEAILGTSMEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVL  383 (513)
Q Consensus       312 R~G~DL~~~~~Isl~eAllG~~v~V~tldG~~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~  383 (513)
                      |.|.|++++++|||.||++|+++.|.+..+.+.|+||+|+++|++++++|+|.+..+  +.+|||+|++++.
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~--~~~GDl~v~i~~~   71 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPD--VIPGDVVFIVSER   71 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTT--CBCCCEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeecCccEEEEecccccCCeEEEecCCcCCCCC--CCCCCEEEEEEec
Confidence            679999999999999999999999998777789999999999999999999998754  3689999999874

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=3.3e-09  Score=86.51  Aligned_cols=81  Identities=27%  Similarity=0.338  Sum_probs=65.8

Q ss_pred             CCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCC
Q 010330          162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCG  241 (513)
Q Consensus       162 ~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  241 (513)
                      ++|.|+.+++.|||.||+.|+++++...                                                    
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI----------------------------------------------------   31 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc----------------------------------------------------
Confidence            4678999999999999999998875421                                                    


Q ss_pred             CCcEEEeeeeeecCCceEEeeeeEEEEEcCCCCcCCCEEEEccccccCC-CCCCCccEEEEEEEeecccccccc
Q 010330          242 GDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDR-RRSLAGDLFVALHVDEKQGIHRDG  314 (513)
Q Consensus       242 G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~-~gg~~GDL~V~I~v~~h~~F~R~G  314 (513)
                                          ..+.++|+||+|+++|++++++|+|.+.. ..+..|||||+++|.-+..+..+.
T Consensus        32 --------------------dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~ls~~q   85 (90)
T d1c3ga2          32 --------------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQ   85 (90)
T ss_dssp             --------------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTH
T ss_pred             --------------------cccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCCCCHHH
Confidence                                02568899999999999999999999753 335689999999999776665443

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=9e-09  Score=81.94  Aligned_cols=74  Identities=26%  Similarity=0.394  Sum_probs=60.6

Q ss_pred             CCCcceeEeeeccceeeEeeeEEEEEeeeeeeccCCCCCCcccccccccCcccCcccEEEEEeecCCcceeeeecCCCCC
Q 010330          162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCG  241 (513)
Q Consensus       162 ~~g~Di~~~l~lsLeEa~~G~~k~v~~~r~~~C~~C~GtG~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  241 (513)
                      +.|.|+.++++|+|.||+.|+++++...                                                    
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS----------------------------------------------------
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec----------------------------------------------------
Confidence            4578999999999999999987765421                                                    


Q ss_pred             CCcEEEeeeeeecCCceEEeeeeEEEEEcCCC--CcCCCEEEEccccccCCCCCCCccEEEEEEEeec
Q 010330          242 GDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEK  307 (513)
Q Consensus       242 G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~I~v~~h  307 (513)
                                          ..+.++|.||++  +++|++++++|+|.+...++..|||||+++|.-+
T Consensus        32 --------------------dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2          32 --------------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             --------------------SSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECC
T ss_pred             --------------------CcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEEcC
Confidence                                024567777776  9999999999999987777789999999999744

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=9.2e-08  Score=75.94  Aligned_cols=68  Identities=13%  Similarity=0.269  Sum_probs=56.2

Q ss_pred             ccceEEEecCHHHHhcCCeeEEe----ccCCc-----EEEEeCCCCCCCCEEEEccCCCCCCCCCCCCCcEEEEEEEE
Q 010330          315 LNLFSKISVDYTEAILGTSMEVE----TVEGM-----KDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVL  383 (513)
Q Consensus       315 ~DL~~~~~Isl~eAllG~~v~V~----tldG~-----~~l~Ip~g~qpG~~~~l~g~G~P~~~~~~~rGDL~V~f~V~  383 (513)
                      .||..+++|||.||..|++..|.    ..+|.     +.|.||||+++|++++++|+|....++ +.+|||+|++++.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~~~i~~~   77 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEK   77 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEEC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcCC-CCCCCEEEEEEeC
Confidence            37889999999999999976664    45553     578899999999999999999876543 3579999999875

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=1.8e-05  Score=62.27  Aligned_cols=46  Identities=37%  Similarity=0.873  Sum_probs=35.9

Q ss_pred             eeeccCCCCCCcccc-----cccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEe
Q 010330          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (513)
Q Consensus       191 ~~~C~~C~GtG~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~  248 (513)
                      ...|+.|+|+|....     ....+|+.|+|+|.++.            .+|+.|+|+|++.+
T Consensus        28 ~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~k   78 (79)
T d1exka_          28 PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK------------DPCNKCHGHGRVER   78 (79)
T ss_dssp             CEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS------------SBCGGGTTSSEEEC
T ss_pred             ceeCCCccceeEEEEecccceeeEECcccCcceeECC------------CCCCCCCCceEeec
Confidence            457999999996532     13458999999998752            57999999998864

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=97.28  E-value=2.1e-06  Score=69.04  Aligned_cols=69  Identities=19%  Similarity=0.439  Sum_probs=53.2

Q ss_pred             eccCCCCCCccccc---ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEEeeeeeecCCceEEe
Q 010330          193 TCDSCGGTGAKSSN---CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQ  261 (513)
Q Consensus       193 ~C~~C~GtG~~~~~---~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~  261 (513)
                      .|..|+|.|.....   ....|..|+|.|......+..++.+..-..|..|+|.|+.+.+.|..|++.|++.
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~~~C~~CH~~gr~~   84 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTS   84 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCCCCSTTTCSSCCCH
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCccccccCccccCCCCcCCCccccccCCCccc
Confidence            69999999865433   3467999999997655444444445455789999999999999999999998654

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.06  E-value=7e-05  Score=58.00  Aligned_cols=46  Identities=28%  Similarity=0.723  Sum_probs=34.4

Q ss_pred             eeccCCCCCCccccc---------ccccCcccCcccEEEEEeecCCcceeeeecCCCCCCCcEEE
Q 010330          192 ETCDSCGGTGAKSSN---------CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII  247 (513)
Q Consensus       192 ~~C~~C~GtG~~~~~---------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~i  247 (513)
                      ..|+.|+|+|.....         ...+|+.|+|+|.++.          ...+|+.|+|.|.+.
T Consensus        19 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~----------~~~~C~~C~G~g~v~   73 (74)
T d1nlta3          19 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID----------PKDRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC----------TTSBCSSSTTSCEEE
T ss_pred             CCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeC----------CCCCCCCCCCeeEeC
Confidence            469999999975321         3468999999997643          125799999999653