Citrus Sinensis ID: 010344

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510--
MSYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVRSRI
cHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHccccEEEEEEcccccccccccccccHHHHHHcccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHcccccEEEEEcccccccccccHHHcccccEEEEcHHHHHHHHccccccccccccEEccccccccccHHHHHHHHHccccccccccccHHHcccccccccccccccccccccccccccEEEEccccccccccccEEEEEEEEcccccccccccccccHHHHHHccccccccEEEEccccEEEcccccEEEEccccEEEEcccccccHHHHHHHccccccccEEEEEEccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHcccccccccEEEcccccccccHHHHHHHHHHHHcccccccccc
cHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHcccEEEEEcccccccccEEccHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHHcccccccccccccccccEEEEEEcccccccccEEEccccHHHEEHHcHEEEccccccEEEEEccccEEccEEEEEcccccccEEEEEccccccHHHHHHHHHcccEEEEccHHHHHHHHHccccccccHHHHHHcccccccccHHHHHHHHHHHccccEEEcEEEcccccEEEccccccccccccccccccccEEEEEcccccccccccccEEEEEEEcccccHHHHHHcccHHHHHHHHcccccccEEEEEEEEEEEcccccEEEEEEHHHcEEEccEEEcHHHHHHHHHHccHHHHHEEEEccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHcccccccHEEEcccccccccHHHHHHHHHHHHcccccccccc
MSYRLVANALDTMFSkgdaiaidmpMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKakgiftqdfilrggrkfplyskvaeagplkaVVLPvigddvgiqlrqqdvswkdflscvdyhpgpkyyppvyrpvdSVINILfssgttgepkaipwtqlspircaaeawghidmkvgdvycwptnlgwvmgPIILFSSFLSGAALALyhgsplersfgkfvqdsgvsvlgTVPSLVKAWkntnclqgldwtkirsfastgetsnvdddLWLASKAYYKpiieccggtelassyiqgsmlqpqafgafstatmTTGFVIldelgvpypddqpcvgevglfplylgatdrllnadheevyfsgmpiykgmhlrrHGDIIKRTVGGYIIVqgraddtmnlggiktssVEIERVCDGADESILETAAisvspagggpEVLVICVVLkkgftsqpvdKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHelsvrsri
MSYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRlrvskakgiftqdfilrggRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKntnclqgldwTKIRSFAStgetsnvdddlWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVqgraddtmnlggIKTSSVEIERVCDGADESILETAAisvspagggPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFprtasnkllrrvlkdqlkhelsvrsri
MSYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVRSRI
****LVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVL**************
MSYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE*******
MSYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQL**********
MSYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH********
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSYRLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVRSRI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query512 2.2.26 [Sep-21-2011]
Q84P17727 Probable acyl-activating no no 0.992 0.698 0.745 0.0
F4KBF3721 Probable acyl-activating no no 0.974 0.692 0.549 1e-159
Q8Z1R0652 Acetyl-coenzyme A synthet N/A no 0.925 0.726 0.263 9e-33
Q8ZKF6652 Acetyl-coenzyme A synthet yes no 0.925 0.726 0.261 2e-32
Q88EH6653 Acetyl-coenzyme A synthet yes no 0.916 0.718 0.261 5e-31
A1JIK3652 Acetyl-coenzyme A synthet yes no 0.916 0.719 0.267 7e-31
A6WM52650 Acetyl-coenzyme A synthet yes no 0.937 0.738 0.249 4e-30
A3D3E8650 Acetyl-coenzyme A synthet yes no 0.937 0.738 0.249 4e-30
Q66FM8652 Acetyl-coenzyme A synthet yes no 0.919 0.722 0.266 4e-30
A7FNG1652 Acetyl-coenzyme A synthet yes no 0.919 0.722 0.266 4e-30
>sp|Q84P17|AEE18_ARATH Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1 Back     alignment and function desciption
 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/510 (74%), Positives = 434/510 (85%), Gaps = 2/510 (0%)

Query: 5   LVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSK 64
           LVANA+   F KGD IAIDMPMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SK
Sbjct: 218 LVANAISGSFEKGDTIAIDMPMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISK 277

Query: 65  AKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVD 124
           AKGIFTQD+ILRGGR+FPLYS+V EA P K +VLP  G ++ +QLR+QDVSW DFLS   
Sbjct: 278 AKGIFTQDYILRGGRRFPLYSRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAK 337

Query: 125 YHP-GPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDV 183
            H  G  YY P+Y PV+SVINILFSSGTTGEPKAIPWTQLSPIR A + W H+D++VG  
Sbjct: 338 PHSSGENYYRPIYLPVESVINILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHT 397

Query: 184 YCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAW 243
           YCWPTNLGWVMGP ++FS FL+GA LALY GSPL R FGKFVQD+GV+VLGTVPSLVK W
Sbjct: 398 YCWPTNLGWVMGPTLMFSCFLTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTW 457

Query: 244 KNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML 303
           K TNC++GL+WTKI+ FA+TGE SNVDD LWL+SKA YKP+IECCGGTELASSYI GS L
Sbjct: 458 KRTNCMEGLNWTKIKFFATTGEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPL 517

Query: 304 QPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYF 363
           QPQAFGAFST +MTT  +I DE GVPYPDDQPC GEVGLFP +LGATDRLLNA+H+EVYF
Sbjct: 518 QPQAFGAFSTPSMTTRIIIFDENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYF 577

Query: 364 SGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESIL 423
            GMP+YK   LRRHGDI+KRTVGGY  VQGRADDTMNLGGIKTSS+EIERVCD ADE I 
Sbjct: 578 KGMPMYKETRLRRHGDIVKRTVGGYYNVQGRADDTMNLGGIKTSSIEIERVCDQADECIS 637

Query: 424 ETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVL 483
           ETAA++++P  GGPE+LVI  VLK+GF  Q  ++LKM FS+ IQ++LNPLFKVS VKIV 
Sbjct: 638 ETAAVTLTPPNGGPELLVIFAVLKEGFKQQSGEELKMKFSRTIQKDLNPLFKVSFVKIVP 697

Query: 484 EFPRTASNKLLRRVLKDQLKHE-LSVRSRI 512
           EFPRTAS+KLLRRVL+DQ+K E LS+RSRI
Sbjct: 698 EFPRTASSKLLRRVLRDQIKQELLSLRSRI 727
May be involved in the peroxisomal activation of 2,4-dichlorophenoxybutyric acid (2,4-DB), a precursor of active auxins that inhibit root growth.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|F4KBF3|AAE17_ARATH Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana GN=AAE17 PE=2 SV=1 Back     alignment and function description
>sp|Q8Z1R0|ACSA_SALTI Acetyl-coenzyme A synthetase OS=Salmonella typhi GN=acs PE=3 SV=1 Back     alignment and function description
>sp|Q8ZKF6|ACSA_SALTY Acetyl-coenzyme A synthetase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=acs PE=1 SV=1 Back     alignment and function description
>sp|Q88EH6|ACSA1_PSEPK Acetyl-coenzyme A synthetase 1 OS=Pseudomonas putida (strain KT2440) GN=acsA1 PE=3 SV=1 Back     alignment and function description
>sp|A1JIK3|ACSA_YERE8 Acetyl-coenzyme A synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=acs PE=3 SV=1 Back     alignment and function description
>sp|A6WM52|ACSA_SHEB8 Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS185) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|A3D3E8|ACSA_SHEB5 Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|Q66FM8|ACSA_YERPS Acetyl-coenzyme A synthetase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=acs PE=3 SV=1 Back     alignment and function description
>sp|A7FNG1|ACSA_YERP3 Acetyl-coenzyme A synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=acs PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query512
225435726 727 PREDICTED: acetyl-coenzyme A synthetase 0.990 0.697 0.814 0.0
297746452 685 unnamed protein product [Vitis vinifera] 0.990 0.740 0.809 0.0
224052966526 predicted protein [Populus trichocarpa] 0.990 0.963 0.803 0.0
255572274 625 acetyl-CoA synthetase, putative [Ricinus 0.990 0.811 0.789 0.0
380042388 727 acyl-activating enzyme 14 [Cannabis sati 0.984 0.693 0.796 0.0
357518845 770 Acetyl-coenzyme A synthetase [Medicago t 0.990 0.658 0.773 0.0
356525251 728 PREDICTED: acetyl-coenzyme A synthetase- 0.990 0.696 0.781 0.0
380042386 715 acyl-activating enzyme 13 [Cannabis sati 0.984 0.704 0.763 0.0
356510959 725 PREDICTED: acetyl-coenzyme A synthetase 0.990 0.699 0.756 0.0
449503439 725 PREDICTED: probable acyl-activating enzy 0.990 0.699 0.732 0.0
>gi|225435726|ref|XP_002285701.1| PREDICTED: acetyl-coenzyme A synthetase [Vitis vinifera] gi|297746451|emb|CBI16507.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/508 (81%), Positives = 464/508 (91%), Gaps = 1/508 (0%)

Query: 5   LVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSK 64
           +VAN LD  FSKGDAIAIDMPMTVHAVIIYLAI+LAG+VVVSIADSFAA+EIATRL VSK
Sbjct: 221 MVANVLDATFSKGDAIAIDMPMTVHAVIIYLAIVLAGFVVVSIADSFAAKEIATRLHVSK 280

Query: 65  AKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVD 124
           AKGIFTQDFI+RGGRKFPLYS+V EA P K +VLP IG DV +QLR+QD+SWKDFLS  D
Sbjct: 281 AKGIFTQDFIVRGGRKFPLYSRVVEAAPHKVIVLPAIGTDVDVQLREQDLSWKDFLSHAD 340

Query: 125 YHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVY 184
           + P P  Y PVY+P+D+V NILFSSGTTG+PKAIPWTQ+SPIR +A+AW  I+++VGDV+
Sbjct: 341 HLPRPNNYSPVYQPIDAVTNILFSSGTTGDPKAIPWTQVSPIRSSADAWAQINIQVGDVF 400

Query: 185 CWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWK 244
           CWPTNLGWVMGP IL++SFL+GAALALYHGSPL+R FGKFVQD+GV+VLGTVPSLVK WK
Sbjct: 401 CWPTNLGWVMGPTILYASFLTGAALALYHGSPLDRGFGKFVQDAGVTVLGTVPSLVKTWK 460

Query: 245 NTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQ 304
           NT C++GLDWTKI+SFASTGETSNVDDDLWL+S+AYYKPIIECCGGTELASSYIQGS+LQ
Sbjct: 461 NTGCMEGLDWTKIKSFASTGETSNVDDDLWLSSRAYYKPIIECCGGTELASSYIQGSVLQ 520

Query: 305 PQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFS 364
           PQAFG FSTA MTTGFVILDE GVPYPDDQPCVGEVGLFPL +GATD LLNADHEEVYF 
Sbjct: 521 PQAFGTFSTAAMTTGFVILDENGVPYPDDQPCVGEVGLFPLIMGATDWLLNADHEEVYFK 580

Query: 365 GMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILE 424
           GMP+YKGMHLRRHGDIIKRTVGGY +VQGRADDTMNLGGIKTSSVEIERVCD ADES+LE
Sbjct: 581 GMPMYKGMHLRRHGDIIKRTVGGYFVVQGRADDTMNLGGIKTSSVEIERVCDKADESVLE 640

Query: 425 TAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLE 484
           +AAIS +P  GGPE+LV+ VVLKKG+  +P ++LKM FSKAIQRNLNPLFKV+ VKIV E
Sbjct: 641 SAAISTAPLNGGPELLVVFVVLKKGYDCEP-NELKMKFSKAIQRNLNPLFKVNFVKIVPE 699

Query: 485 FPRTASNKLLRRVLKDQLKHELSVRSRI 512
           FPRTASNK+LRRVL+DQ+KHELSVRSRI
Sbjct: 700 FPRTASNKILRRVLRDQIKHELSVRSRI 727

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297746452|emb|CBI16508.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224052966|ref|XP_002297640.1| predicted protein [Populus trichocarpa] gi|222844898|gb|EEE82445.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255572274|ref|XP_002527076.1| acetyl-CoA synthetase, putative [Ricinus communis] gi|223533581|gb|EEF35320.1| acetyl-CoA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|380042388|gb|AFD33358.1| acyl-activating enzyme 14 [Cannabis sativa] Back     alignment and taxonomy information
>gi|357518845|ref|XP_003629711.1| Acetyl-coenzyme A synthetase [Medicago truncatula] gi|355523733|gb|AET04187.1| Acetyl-coenzyme A synthetase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356525251|ref|XP_003531240.1| PREDICTED: acetyl-coenzyme A synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|380042386|gb|AFD33357.1| acyl-activating enzyme 13 [Cannabis sativa] Back     alignment and taxonomy information
>gi|356510959|ref|XP_003524200.1| PREDICTED: acetyl-coenzyme A synthetase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|449503439|ref|XP_004162003.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query512
TAIR|locus:2035721727 AAE18 "acyl-activating enzyme 0.992 0.698 0.745 4.7e-206
TAIR|locus:2178277721 AAE17 "acyl-activating enzyme 0.968 0.687 0.554 1.2e-145
TIGR_CMR|BA_2553646 BA_2553 "acetoacetyl-CoA synth 0.916 0.726 0.292 3.8e-42
DICTYBASE|DDB_G0277815674 acsA "acetyl-CoA synthetase" [ 0.943 0.716 0.268 4.2e-30
UNIPROTKB|P27550652 acs [Escherichia coli K-12 (ta 0.919 0.722 0.261 2.8e-29
POMBASE|SPCC191.02c662 SPCC191.02c "acetyl-CoA ligase 0.949 0.734 0.246 1.9e-27
TIGR_CMR|SO_2743650 SO_2743 "acetyl-coenzyme A syn 0.937 0.738 0.24 9.2e-27
TIGR_CMR|CHY_0249627 CHY_0249 "acetyl-coenzyme A sy 0.910 0.743 0.258 1.4e-26
UNIPROTKB|Q9KV59649 acsA "Acetyl-coenzyme A synthe 0.921 0.727 0.253 2.7e-26
TIGR_CMR|VC_0298649 VC_0298 "acetyl-CoA synthase" 0.921 0.727 0.253 2.7e-26
TAIR|locus:2035721 AAE18 "acyl-activating enzyme 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1993 (706.6 bits), Expect = 4.7e-206, P = 4.7e-206
 Identities = 380/510 (74%), Positives = 434/510 (85%)

Query:     5 LVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSK 64
             LVANA+   F KGD IAIDMPMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SK
Sbjct:   218 LVANAISGSFEKGDTIAIDMPMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISK 277

Query:    65 AKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVD 124
             AKGIFTQD+ILRGGR+FPLYS+V EA P K +VLP  G ++ +QLR+QDVSW DFLS   
Sbjct:   278 AKGIFTQDYILRGGRRFPLYSRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAK 337

Query:   125 YHP-GPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDV 183
              H  G  YY P+Y PV+SVINILFSSGTTGEPKAIPWTQLSPIR A + W H+D++VG  
Sbjct:   338 PHSSGENYYRPIYLPVESVINILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHT 397

Query:   184 YCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAW 243
             YCWPTNLGWVMGP ++FS FL+GA LALY GSPL R FGKFVQD+GV+VLGTVPSLVK W
Sbjct:   398 YCWPTNLGWVMGPTLMFSCFLTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTW 457

Query:   244 KNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML 303
             K TNC++GL+WTKI+ FA+TGE SNVDD LWL+SKA YKP+IECCGGTELASSYI GS L
Sbjct:   458 KRTNCMEGLNWTKIKFFATTGEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPL 517

Query:   304 QPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYF 363
             QPQAFGAFST +MTT  +I DE GVPYPDDQPC GEVGLFP +LGATDRLLNA+H+EVYF
Sbjct:   518 QPQAFGAFSTPSMTTRIIIFDENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYF 577

Query:   364 SGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESIL 423
              GMP+YK   LRRHGDI+KRTVGGY  VQGRADDTMNLGGIKTSS+EIERVCD ADE I 
Sbjct:   578 KGMPMYKETRLRRHGDIVKRTVGGYYNVQGRADDTMNLGGIKTSSIEIERVCDQADECIS 637

Query:   424 ETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVL 483
             ETAA++++P  GGPE+LVI  VLK+GF  Q  ++LKM FS+ IQ++LNPLFKVS VKIV 
Sbjct:   638 ETAAVTLTPPNGGPELLVIFAVLKEGFKQQSGEELKMKFSRTIQKDLNPLFKVSFVKIVP 697

Query:   484 EFPRTASNKLLRRVLKDQLKHEL-SVRSRI 512
             EFPRTAS+KLLRRVL+DQ+K EL S+RSRI
Sbjct:   698 EFPRTASSKLLRRVLRDQIKQELLSLRSRI 727
GO:0003824 "catalytic activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016874 "ligase activity" evidence=ISS
GO:0005777 "peroxisome" evidence=IDA
GO:0009850 "auxin metabolic process" evidence=IMP
TAIR|locus:2178277 AAE17 "acyl-activating enzyme 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2553 BA_2553 "acetoacetyl-CoA synthase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277815 acsA "acetyl-CoA synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P27550 acs [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
POMBASE|SPCC191.02c SPCC191.02c "acetyl-CoA ligase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2743 SO_2743 "acetyl-coenzyme A synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0249 CHY_0249 "acetyl-coenzyme A synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KV59 acsA "Acetyl-coenzyme A synthetase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0298 VC_0298 "acetyl-CoA synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00024773001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (727 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query512
PLN03052728 PLN03052, PLN03052, acetate--CoA ligase; Provision 0.0
PLN03051499 PLN03051, PLN03051, acyl-activating enzyme; Provis 0.0
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 7e-67
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 3e-54
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 7e-45
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 3e-44
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 7e-43
PRK03584655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 3e-38
TIGR01217652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 5e-35
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 3e-33
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 1e-32
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 1e-31
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 6e-29
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 9e-26
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 2e-20
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 5e-18
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 1e-16
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 2e-16
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 2e-16
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 1e-15
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 9e-15
PRK10524629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 2e-14
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 2e-14
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 4e-14
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 6e-14
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 6e-14
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 7e-14
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 1e-13
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 2e-13
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 3e-13
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 6e-13
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 1e-12
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 1e-12
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 2e-12
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 4e-12
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 6e-12
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 8e-12
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 2e-11
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 3e-11
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4e-11
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 5e-11
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 7e-11
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 7e-11
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 1e-10
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 1e-10
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 1e-09
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 4e-09
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 9e-09
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 1e-08
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 1e-08
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 5e-08
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 5e-08
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 6e-08
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 2e-07
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 3e-07
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 8e-07
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 1e-06
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 1e-06
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 2e-06
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 2e-06
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 3e-06
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 3e-06
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 3e-06
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 4e-06
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 5e-06
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 7e-06
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 1e-05
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 2e-05
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 5e-05
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 7e-05
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 8e-05
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 1e-04
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 1e-04
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 2e-04
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 2e-04
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 3e-04
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 3e-04
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 3e-04
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 5e-04
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 5e-04
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 7e-04
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 7e-04
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 8e-04
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 8e-04
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 0.001
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 0.001
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 0.001
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 0.002
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 0.002
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 0.002
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 0.002
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 0.002
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 0.002
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 0.003
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 0.003
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 0.003
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 0.003
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 0.003
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 0.003
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 0.003
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 0.004
>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional Back     alignment and domain information 
 Score =  945 bits (2444), Expect = 0.0
 Identities = 336/510 (65%), Positives = 396/510 (77%), Gaps = 3/510 (0%)

Query: 5   LVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVS 63
            VANALD + F KGDAIAIDMPM VHAVIIYLAIILAG VVVSIADSFA  EIATRL++S
Sbjct: 220 RVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKIS 279

Query: 64  KAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCV 123
           KAK IFTQD I+RGG+  PLYS+V EA   KA+VLP  G  V ++LR+ D+SW DFL+  
Sbjct: 280 KAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARA 339

Query: 124 DYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDV 183
           +    P  Y  V +PV++  NILFSSGTTGEPKAIPWTQL+P+R AA+AW H+D++ GD+
Sbjct: 340 NGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI 399

Query: 184 YCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAW 243
            CWPTNLGW+MGP ++++S L+GA LALY+GSPL R F KFVQD+ V++LGTVPS+VK W
Sbjct: 400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTW 459

Query: 244 KNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML 303
           KNTNC+ GLDW+ IR F STGE S+VDD LWL S+A YKPIIE CGGTEL   ++ GS+L
Sbjct: 460 KNTNCMAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLL 519

Query: 304 QPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYF 363
           QPQAF AFST  M     ILD+ G PYPDD PC GE+ LFPL  GA+  LLNADH +VYF
Sbjct: 520 QPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYF 579

Query: 364 SGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESIL 423
            GMP++ G  LRRHGDI +RT GGY    GRADDTMNLGGIK SSVEIERVC+ ADES+L
Sbjct: 580 KGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVL 639

Query: 424 ETAAISVSPAGGGPEVLVICVVLKKGFTSQP-VDKLKMIFSKAIQRNLNPLFKVSLVKIV 482
           ETAAI V P GGGPE LVI  VLK    S P +++LK IF+ AIQ+ LNPLFKVS V IV
Sbjct: 640 ETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIV 699

Query: 483 LEFPRTASNKLLRRVLKDQLKHELSVRSRI 512
             FPRTASNK++RRVL+ QL  ELS RS++
Sbjct: 700 PSFPRTASNKVMRRVLRQQLAQELS-RSKL 728

Length = 728
>gnl|CDD|215552 PLN03051, PLN03051, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 512
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PLN02654666 acetate-CoA ligase 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PLN02479567 acetate-CoA ligase 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK056914334 peptide synthase; Validated 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.98
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.96
KOG36281363 consensus Predicted AMP-binding protein [General f 99.96
PRK09188365 serine/threonine protein kinase; Provisional 99.87
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.85
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.83
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.6
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 99.27
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 99.02
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.64
PLN02249597 indole-3-acetic acid-amido synthetase 98.35
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 97.99
PLN02247606 indole-3-acetic acid-amido synthetase 97.91
PLN02620612 indole-3-acetic acid-amido synthetase 97.88
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.9e-78  Score=595.33  Aligned_cols=476  Identities=25%  Similarity=0.270  Sum_probs=404.1

Q ss_pred             cHHHHHHHHhcc---CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccC
Q 010344            2 SYRLVANALDTM---FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGG   78 (512)
Q Consensus         2 ~~~~~a~~L~~~---i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~   78 (512)
                      .+.++|.+|.+.   +++||+|++++||+++++.+++||+.+|+++.++||.+.+.++.+.++.++++++|++...    
T Consensus        54 ~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~----  129 (537)
T KOG1176|consen   54 RCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDF----  129 (537)
T ss_pred             HHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCch----
Confidence            368999999975   7889999999999999999999999999999999999999999999999999999999853    


Q ss_pred             ccccchhhHHhcCCCceEEeeccCCcccccccccCcc-HHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010344           79 RKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVS-WKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKA  157 (512)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~  157 (512)
                        .+++.........+++++................. +.++......     .. ..+.+.+|++.++|||||||.|||
T Consensus       130 --~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~dd~~~il~SSGTTg~PKg  201 (537)
T KOG1176|consen  130 --YDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP-----DG-IRPVSEDDTAAILYSSGTTGLPKG  201 (537)
T ss_pred             --HHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC-----cc-cccCCCCCeEEEecCCCCCCCCce
Confidence              35555555555555555543311111111112222 4444433332     11 455667999999999999999999


Q ss_pred             EEecCchhHHHHHHhhccccccCCcEEEecCCccchhhhHHHHhhhccCceEEEecCCCchhhHHHHHHhcCceEEecch
Q 010344          158 IPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVP  237 (512)
Q Consensus       158 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~~t~l~~~P  237 (512)
                      |++||+++..+..+......+...++.++.+|++|.+|+..++.+++.|++.++....++++.+++.+++|++|+++++|
T Consensus       202 V~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP  281 (537)
T KOG1176|consen  202 VVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVP  281 (537)
T ss_pred             EEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcCh
Confidence            99999999998877776677788999999999999999999888777777766667778999999999999999999999


Q ss_pred             HHHHHHHccCCCCCCCcCceeEEEeecCCCCchhhHHHHHhhCCCCeeeecCCccccceecccCCCCCCcccccccccCC
Q 010344          238 SLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMT  317 (512)
Q Consensus       238 ~~~~~l~~~~~~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~G~p~~~  317 (512)
                      .++..|+..+....+++++++.+.+||+++++++.+.++++++...+.+.||+||+++..+.+......+.+++|.++++
T Consensus       282 ~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g  361 (537)
T KOG1176|consen  282 PVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPG  361 (537)
T ss_pred             HHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccc
Confidence            99999999876778999999999999999999999999999987889999999999976666555444578999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCccccccc-ccccccccccccccCcceeEEecCCcccCceeeeecceEEEeCCCeEEEEeccC
Q 010344          318 TGFVILDELGVPYPDDQPCVGEVGL-FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD  396 (512)
Q Consensus       318 ~~~~i~d~~~~~~~~g~~~~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~gR~~  396 (512)
                      ++..+.++.|+.+++++  .||||+ ++..+.+|  +.|++.+...|      +++|||||||+|++|+||+|||++|++
T Consensus       362 ~~~~v~~e~g~~l~~~~--~GEI~vrg~~imkGY--~~NpeaT~~~~------~~~GW~~TGDiGy~D~DG~l~IvdR~K  431 (537)
T KOG1176|consen  362 VRVKVLDETGVSLGPNQ--TGEICVRGPQVMKGY--LKNPEATKEAF------DDDGWFHTGDLGYFDEDGYLYIVDRSK  431 (537)
T ss_pred             eEEEeeCCCCCCCCCCC--ceEEEEECcccchhh--cCChHHHHhhc------ccCCccccCceEEEcCCCeEEEecchh
Confidence            99999999999999999  699999 66666542  34555555444      344899999999999999999999999


Q ss_pred             ceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHHHHHHHHhccCCccce
Q 010344          397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKV  476 (512)
Q Consensus       397 d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~p  476 (512)
                      |+||.+|++|+|.|||++|. .||.|.|++|++.+|+..| +.+.|+|+.+++.. ++++++.++++    ++|++|+.|
T Consensus       432 dlIk~~G~qv~P~EiE~vL~-~hP~V~eaaVvgipDe~~G-e~p~A~VV~k~g~~-lte~di~~~v~----k~l~~y~~~  504 (537)
T KOG1176|consen  432 DLIKYGGEQVSPAEIEAVLL-THPDVLEAAVVGIPDEVWG-ETPAAFVVLKKGST-LTEKDIIEYVR----KKLPAYKLP  504 (537)
T ss_pred             hheeeCCEEeCHHHHHHHHH-hCCCccEEEEEcccccccC-CcceEEEEecCCCc-CCHHHHHHHHH----hhCChhhcc
Confidence            99999999999999999999 9999999999999999999 99999999999776 88888887776    566779999


Q ss_pred             eeEEEecCCCCCCCchHHHHHHHHHHHhhh
Q 010344          477 SLVKIVLEFPRTASNKLLRRVLKDQLKHEL  506 (512)
Q Consensus       477 ~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~  506 (512)
                      +.++|+|+||+|++|||.|+.|++++.+..
T Consensus       505 ~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~  534 (537)
T KOG1176|consen  505 GGVVFVDELPKTPNGKILRRKLRDIAKKLG  534 (537)
T ss_pred             CeEEEeccCCCCCcchHHHHHHHHHHHhcc
Confidence            999999999999999999999999998643

>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query512
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 1e-33
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 2e-33
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 2e-33
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 3e-33
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 8e-33
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 1e-32
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 2e-32
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 2e-21
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 9e-09
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 1e-06
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 2e-06
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 2e-06
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 4e-06
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 4e-06
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 5e-06
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 5e-06
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 6e-06
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 7e-06
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 2e-05
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 4e-05
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 3e-04
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 4e-04
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure 
Iteration: 1

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 226/523 (43%), Gaps = 52/523 (9%)
Query: 4   RLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVS 63
           R     LD    KGD +AI MPM   A +  LA    G V   I   F+   +A R+  S
Sbjct: 119 RFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDS 178
Query: 64  KAKGIFTQDFILRGGRKFPLYSKVAEAGPLK---------AVVLPVIGDDVGIQLRQQDV 114
            ++ + T D  +R GR  PL   V +A  LK          +VL   G D+  Q   +D+
Sbjct: 179 SSRLVITADEGVRAGRSIPLKKNVDDA--LKNPNVTSVEHVIVLKRTGSDIDWQ-EGRDL 235
Query: 115 SWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWG 174
            W+D +        P++ P      D +  IL++SG+TG+PK +  T    +  AA  + 
Sbjct: 236 WWRDLIEKA----SPEHQPEAMNAEDPLF-ILYTSGSTGKPKGVLHTTGGYLVYAATTFK 290
Query: 175 HI-DMKVGDVYCWPTNLGWVMG-PIILFSSFLSGAALALYHGSPLERSFGKFVQ---DSG 229
           ++ D   GD+Y    ++GWV G   +L+     GA   ++ G P   +  +  Q      
Sbjct: 291 YVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQ 350
Query: 230 VSVLGTVPSLVKAW--KNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYK--PII 285
           V++L T P+ ++A   +    ++G D + +R   S GE  N +   W   K   +  P++
Sbjct: 351 VNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVV 410
Query: 286 ECCGGTELASSYIQGSMLQPQAFG-AFSTATMTTGF-----VILDELGVPYPDDQPCVGE 339
           +    TE       G M+ P          + T  F      ++D  G  +P +    G 
Sbjct: 411 DTWWQTETG-----GFMITPLPGAIELKAGSATRPFFGVQPALVDNEG--HPQEGATEGN 463
Query: 340 VGLFPLYLGATDRLLNADH---EEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRAD 396
           + +   + G   R L  DH   E+ YFS    +K M+    GD  +R   GY  + GR D
Sbjct: 464 LVITDSWPGQA-RTLFGDHERFEQTYFS---TFKNMYFS--GDGARRDEDGYYWITGRVD 517
Query: 397 DTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVD 456
           D +N+ G +  + EIE     A   I E A + +  A  G + +   V L  G   +P  
Sbjct: 518 DVLNVSGHRLGTAEIESAL-VAHPKIAEAAVVGIPHAIKG-QAIYAYVTLNHG--EEPSP 573
Query: 457 KLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLK 499
           +L       +++ + PL    ++      P+T S K++RR+L+
Sbjct: 574 ELYAEVRNWVEKEIGPLATPDVLHWTDSLPKTRSGKIMRRILR 616
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query512
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 7e-45
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 2e-41
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 1e-32
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 1e-23
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-21
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 3e-21
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 1e-20
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 4e-20
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 9e-20
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 9e-04
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 7e-19
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 3e-08
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 9e-19
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 5e-05
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 1e-18
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 4e-18
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 5e-18
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 5e-08
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 7e-18
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 2e-09
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 2e-17
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 2e-14
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 2e-06
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 2e-10
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 2e-05
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 8e-10
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 7e-06
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 3e-06
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 6e-04
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
 Score =  164 bits (417), Expect = 7e-45
 Identities = 102/513 (19%), Positives = 173/513 (33%), Gaps = 61/513 (11%)

Query: 6   VANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSK 64
            A+AL T+     + I + M  TV   + +L  + AG V V         +    L  S 
Sbjct: 61  FASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSH 120

Query: 65  AKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVD 124
           A+ +     ++         ++  E+       L V          +    +++ +    
Sbjct: 121 ARAVIASGALV------QNVTQALESAEHDGCQLIVSQPRES--EPRLAPLFEELID--- 169

Query: 125 YHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPI---RCAAEAWGHIDMKVG 181
                          D +   L+SSG+TG+PK    T  +        A+    + +   
Sbjct: 170 --AAAPAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPI--LGIAEN 225

Query: 182 DVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLV 240
           DV      L +  G    L      GA   L    P   +    + +   +V   VP+L 
Sbjct: 226 DVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLY 285

Query: 241 KAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYY-KPIIECCGGTELASSYIQ 299
                +  L       IR   S GE      ++     A++   I++  G TE    +I 
Sbjct: 286 ANMLVSPNLPARADVAIRICTSAGEALPR--EIGERFTAHFGCEILDGIGSTE--MLHIF 341

Query: 300 GSM-LQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEV-----GLFPLYLGATDRL 353
            S       +G            + DE G   PD +  VG++         +Y    ++ 
Sbjct: 342 LSNRAGAVEYGTTGRPVPGYEIELRDEAGHAVPDGE--VGDLYIKGPSAAVMYWNNREKS 399

Query: 354 LNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIER 413
                 E   S             GD   R   G  +  GR+DD + + G   S VE+E 
Sbjct: 400 RATFLGEWIRS-------------GDKYCRLPNGCYVYAGRSDDMLKVSGQYVSPVEVEM 446

Query: 414 VCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQ----RN 469
           V     +++LE A + V   G         VVLK+ F    +        + ++      
Sbjct: 447 VL-VQHDAVLEAAVVGVDHGGL--VKTRAFVVLKREFAPSEILA------EELKAFVKDR 497

Query: 470 LNPLFKV-SLVKIVLEFPRTASNKLLRRVLKDQ 501
           L P  K    +  V + P+TA+ K+ R  L++Q
Sbjct: 498 LAP-HKYPRDIVFVDDLPKTATGKIQRFKLREQ 529
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query512
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.97
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.58
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.56
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 99.0
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 98.97
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.92
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 80.73
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
Probab=100.00  E-value=8.4e-74  Score=599.00  Aligned_cols=488  Identities=25%  Similarity=0.367  Sum_probs=389.4

Q ss_pred             cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344            2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK   80 (512)
Q Consensus         2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~   80 (512)
                      .++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.
T Consensus       116 ~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~  195 (652)
T 1pg4_A          116 DVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRS  195 (652)
T ss_dssp             HHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEE
T ss_pred             HHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcc
Confidence            378999999999 9999999999999999999999999999999999999999999999999999999998764332222


Q ss_pred             ccc---hhhHHhcCC----CceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010344           81 FPL---YSKVAEAGP----LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTG  153 (512)
Q Consensus        81 ~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG  153 (512)
                      .+.   +.......+    ..++++......... .......|.+++.....     ........++++++|+|||||||
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a~ilyTSGTTG  269 (652)
T 1pg4_A          196 IPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW-QEGRDLWWRDLIEKASP-----EHQPEAMNAEDPLFILYTSGSTG  269 (652)
T ss_dssp             EESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC-CBTTEEEHHHHHTTSCS-----CCCCCCEETTSEEEEEEECCSSS
T ss_pred             cchHHHHHHHHhcCCcCCCCEEEEEeCCCCcccc-cCCCceeHHHHHhhcCC-----CCCccccCCCCCEEEEeccCCCC
Confidence            222   222222221    122333211111000 01123457777654322     11223345789999999999999


Q ss_pred             CCceEEecCchhHHHHHH-hhccccccCCcEEEecCCccchhhh-HHHHhhhccCceEEEecCC---CchhhHHHHHHhc
Q 010344          154 EPKAIPWTQLSPIRCAAE-AWGHIDMKVGDVYCWPTNLGWVMGP-IILFSSFLSGAALALYHGS---PLERSFGKFVQDS  228 (512)
Q Consensus       154 ~pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~  228 (512)
                      .||||+++|+++...... ....+++.++|++++..|++|..++ +.++.+|+.|+++++.++.   .++..+++.|+++
T Consensus       270 ~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~  349 (652)
T 1pg4_A          270 KPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKH  349 (652)
T ss_dssp             SCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHH
T ss_pred             CCceEEECchHHHHHHHHHHHHhcCCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHh
Confidence            999999999998776643 3445788999999999999999998 4588999999999998753   4788999999999


Q ss_pred             CceEEecchHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhC--CCCeeeecCCccccceecccCC-C
Q 010344          229 GVSVLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAY--YKPIIECCGGTELASSYIQGSM-L  303 (512)
Q Consensus       229 ~~t~l~~~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~-~  303 (512)
                      ++|+++++|++++.|++...  ....++++||.+++|||++++++.+++.+.++  .+++++.||+||++..++.... .
T Consensus       350 ~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~  429 (652)
T 1pg4_A          350 QVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGA  429 (652)
T ss_dssp             TCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTT
T ss_pred             CCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEccccCcccccceecCCCCC
Confidence            99999999999999987653  34567899999999999999999999998873  2789999999999876554432 2


Q ss_pred             CCCcccccccccCCccEEEeCCCCCCCCCCCCccccccccccccccccccccc-Ccce-eEEecCCcccCceeeeecceE
Q 010344          304 QPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNA-DHEE-VYFSGMPIYKGMHLRRHGDII  381 (512)
Q Consensus       304 ~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~TGD~~  381 (512)
                      .....+++|.|++|++++|+|++|++++.|+  .|||+|+..+.+...+|.+. +.+. .+|.     ..+|||+|||+|
T Consensus       430 ~~~~~~s~G~p~~g~~v~i~d~~g~~v~~g~--~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~-----~~~g~y~TGDlg  502 (652)
T 1pg4_A          430 IELKAGSATRPFFGVQPALVDNEGHPQEGAT--EGNLVITDSWPGQARTLFGDHERFEQTYFS-----TFKNMYFSGDGA  502 (652)
T ss_dssp             CCBCTTCCBSBCTTCCEEEECTTCCBCCSSE--EEEEEECSCCTTCCCEETTCHHHHHHHHHS-----SSTTSEEEEEEE
T ss_pred             cCccCCccccCcCCCeEEEECCCCCCcCCCc--eEEEEEccCCCchhhhhcCCHHHHHhhhhh-----cCCCEEECCcEE
Confidence            3456789999999999999999999999998  79999943222222222222 2111 1221     235799999999


Q ss_pred             EEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHH
Q 010344          382 KRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMI  461 (512)
Q Consensus       382 ~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~  461 (512)
                      ++|+||+++|+||+||+||++|++|+|.|||++|. +||+|.+++|++.+++..+ +.++|+|+++++.. . .+++.+.
T Consensus       503 ~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~-~~p~V~ea~Vvg~~~~~~g-~~l~a~Vv~~~~~~-~-~~~~~~~  578 (652)
T 1pg4_A          503 RRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKIAEAAVVGIPHAIKG-QAIYAYVTLNHGEE-P-SPELYAE  578 (652)
T ss_dssp             EECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHH-HSTTEEEEEEEEEEETTTE-EEEEEEEEECTTCC-C-CHHHHHH
T ss_pred             EEcCCCcEEEEecCCCEEEECCEEECHHHHHHHHH-hCCCcceEEEEEEEcCCCC-eEEEEEEEECCCCC-C-CHHHHHH
Confidence            99999999999999999999999999999999998 8999999999999988888 89999999987653 2 3456777


Q ss_pred             HHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhhh
Q 010344          462 FSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHEL  506 (512)
Q Consensus       462 ~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~~  506 (512)
                      ++++++++|++|++|+.|+++++||+|++||++|+.|++++.+++
T Consensus       579 l~~~l~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~  623 (652)
T 1pg4_A          579 VRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDT  623 (652)
T ss_dssp             HHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHHHHHTC-
T ss_pred             HHHHHHHhCCCCcCCeEEEEcCCCCCCCCccchHHHHHHHHhCCC
Confidence            888888999999999999999999999999999999999998753
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 512
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 2e-63
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 2e-56
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 3e-43
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 6e-40
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 8e-37
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 1e-35
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 3e-29
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  216 bits (550), Expect = 2e-63
 Identities = 124/518 (23%), Positives = 214/518 (41%), Gaps = 29/518 (5%)

Query: 6   VANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSK 64
            AN L  +   KGD +AI MPM   A +  LA    G V   I   F+   +A  +  S 
Sbjct: 116 FANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSS 175

Query: 65  AKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSW---KDFLS 121
           ++ + T D  +R GR  PL   V +A  LK   +  +   + ++    D+ W   +D   
Sbjct: 176 SRLVITADEGVRAGRSIPLKKNVDDA--LKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWW 233

Query: 122 CVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHI-DMKV 180
                     + P     +  + IL++SG+TG+PK +  T    +  AA  + ++ D   
Sbjct: 234 RDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHP 293

Query: 181 GDVYCWPTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERS---FGKFVQDSGVSVLGTV 236
           GD+Y    ++GWV G   +L+     GA   ++ G P   +     + V    V++L T 
Sbjct: 294 GDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTA 353

Query: 237 PSLVKAWKNTN--CLQGLDWTKIRSFASTGETSNVDDDLWLASK--AYYKPIIECCGGTE 292
           P+ ++A        ++G D + +R   S GE  N +   W   K      P+++    TE
Sbjct: 354 PTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTE 413

Query: 293 ---LASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGA 349
                 + + G++      G+ +         ++D  G P        G + +   + G 
Sbjct: 414 TGGFMITPLPGAI--ELKAGSATRPFFGVQPALVDNEGHPQEGATE--GNLVITDSWPGQ 469

Query: 350 TDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 409
              L   DHE    +    +K M+    GD  +R   GY  + GR DD +N+ G +  + 
Sbjct: 470 ARTLFG-DHERFEQTYFSTFKNMY--FSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTA 526

Query: 410 EIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRN 469
           EIE     A   I E A + +  A  G + +   V L  G    P    ++     +++ 
Sbjct: 527 EIESALV-AHPKIAEAAVVGIPHAIKG-QAIYAYVTLNHGEEPSPELYAEVR--NWVRKE 582

Query: 470 LNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELS 507
           + PL    ++      P+T S K++RR+L+     + S
Sbjct: 583 IGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTS 620
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query512
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 90.67
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 89.29
d1amua_ 514 Phenylalanine activating domain of gramicidin synt 81.49
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=9.4e-75  Score=602.26  Aligned_cols=487  Identities=25%  Similarity=0.375  Sum_probs=390.3

Q ss_pred             cHHHHHHHHhcc-CCCCCEEEEEcCCCHHHHHHHHHHHHhcceEeecCCCcCHHHHHHHHHhcCccEEEeccchhccCcc
Q 010344            2 SYRLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRK   80 (512)
Q Consensus         2 ~~~~~a~~L~~~-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~iv~~~~~~~~~~~   80 (512)
                      .++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+.
T Consensus       112 ~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~  191 (643)
T d1pg4a_         112 DVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRS  191 (643)
T ss_dssp             HHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEE
T ss_pred             HHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccc
Confidence            478999999999 9999999999999999999999999999999999999999999999999999999998765544444


Q ss_pred             ccchhhHHhcC-----C--CceEEeeccCCcccccccccCccHHHHhhccCCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 010344           81 FPLYSKVAEAG-----P--LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTG  153 (512)
Q Consensus        81 ~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG  153 (512)
                      ......+....     .  ...+++.......... ......+.+......     ....+...+++++++|+|||||||
T Consensus       192 ~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~dd~a~IlyTSGTTG  265 (643)
T d1pg4a_         192 IPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQ-EGRDLWWRDLIEKAS-----PEHQPEAMNAEDPLFILYTSGSTG  265 (643)
T ss_dssp             EESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCC-BTTEEEHHHHHTTSC-----SCCCCCCEETTSEEEEEEECCSSS
T ss_pred             cchhhhHHHHHhccccccceEEEEeccCCcccccc-cccchhhhhhhcccC-----cccCCCCCCCCCeEEEEeCCCccc
Confidence            33333332221     1  1222222222111111 111223333333222     122334456889999999999999


Q ss_pred             CCceEEecCchhHHHHHH-hhccccccCCcEEEecCCccchhhhHH-HHhhhccCceEEEecCC---CchhhHHHHHHhc
Q 010344          154 EPKAIPWTQLSPIRCAAE-AWGHIDMKVGDVYCWPTNLGWVMGPII-LFSSFLSGAALALYHGS---PLERSFGKFVQDS  228 (512)
Q Consensus       154 ~pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~  228 (512)
                      .||||++||++++..... ....+++.++|++++.+|++|++++.. ++++|+.|++++++++.   .++..+++.++++
T Consensus       266 ~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~  345 (643)
T d1pg4a_         266 KPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKH  345 (643)
T ss_dssp             SCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHH
T ss_pred             CCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHH
Confidence            999999999997655444 344578899999999999999999865 78899999999998643   3678999999999


Q ss_pred             CceEEecchHHHHHHHccCC--CCCCCcCceeEEEeecCCCCchhhHHHHHhhC--CCCeeeecCCccccceecccCC-C
Q 010344          229 GVSVLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAY--YKPIIECCGGTELASSYIQGSM-L  303 (512)
Q Consensus       229 ~~t~l~~~P~~~~~l~~~~~--~~~~~l~~l~~i~~~G~~l~~~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~-~  303 (512)
                      ++|+++++|+++..|++...  ....++++||.++++|+++++++.+++.+.++  ++++++.||+||+|+.++.... .
T Consensus       346 ~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~~i~~~yG~TE~g~~~~~~~~~~  425 (643)
T d1pg4a_         346 QVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGA  425 (643)
T ss_dssp             TCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTT
T ss_pred             CCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCceEEEeechhhccceEEecCCCc
Confidence            99999999999999987643  34668899999999999999999999998874  4679999999999876554332 2


Q ss_pred             CCCcccccccccCCccEEEeCCCCCCCCCCCCccccccccccccccccccccc-Ccc-eeEEecCCcccCceeeeecceE
Q 010344          304 QPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNA-DHE-EVYFSGMPIYKGMHLRRHGDII  381 (512)
Q Consensus       304 ~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~~~Gel~v~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~TGD~~  381 (512)
                      ...+.+++|.|++|++++|+|++|++++.|+  .|||+|+....+...+|.+. +.+ +.++     ...++||+|||+|
T Consensus       426 ~~~~~gs~G~p~~g~~v~ivd~~g~~~~~g~--~Gel~v~~~~p~~~~~~~~~~~~~~~~~~-----~~~~g~~~TGDl~  498 (643)
T d1pg4a_         426 IELKAGSATRPFFGVQPALVDNEGHPQEGAT--EGNLVITDSWPGQARTLFGDHERFEQTYF-----STFKNMYFSGDGA  498 (643)
T ss_dssp             CCBCTTCCBSBCTTCCEEEECTTCCBCCSSE--EEEEEECSCCTTCCCEETTCHHHHHHHHH-----SSSTTSEEEEEEE
T ss_pred             cCCCCCccccccCCCEEEEECCCCCCCCCCc--eEEEEEecCCCcccccccCChhhchhhhc-----ccCCCeEEcCCEE
Confidence            3456789999999999999999999999998  79999954333322222221 111 1122     2456799999999


Q ss_pred             EEeCCCeEEEEeccCceeeecceecchHHHHHhhhcCCcceeeeeEEeeCCCCCCCceEEEEEEecCCCCCCcHHHHHHH
Q 010344          382 KRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMI  461 (512)
Q Consensus       382 ~~~~~g~l~i~gR~~d~i~~~G~~v~~~~iE~~l~~~~~~v~~~~v~~~~~~~~~~~~~~a~v~~~~~~~~~~~~~l~~~  461 (512)
                      ++|+||+++++||+||+||++|++|+|.|||++|. +||+|.+++|++++++..| +.++|||+++++..  ..+++.+.
T Consensus       499 ~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~-~~p~V~eaaVvg~~d~~~g-e~~~a~Vv~~~~~~--~~~~~~~~  574 (643)
T d1pg4a_         499 RRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKIAEAAVVGIPHAIKG-QAIYAYVTLNHGEE--PSPELYAE  574 (643)
T ss_dssp             EECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHH-HSTTEEEEEEEEEEETTTE-EEEEEEEEECTTCC--CCHHHHHH
T ss_pred             EECCCceEEEecccccEEEECCEEECHHHHHHHHH-hCCCcceEEEEEEECCCCC-eEEEEEEEECCCCC--CCHHHHHH
Confidence            99999999999999999999999999999999998 8999999999999998888 89999999998764  34566677


Q ss_pred             HHHHHHhccCCccceeeEEEecCCCCCCCchHHHHHHHHHHHhh
Q 010344          462 FSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE  505 (512)
Q Consensus       462 ~~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~l~~~~~~~  505 (512)
                      ++++++++|++|++|+.|+++++||+|++||++|+.|++++..+
T Consensus       575 i~~~~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~  618 (643)
T d1pg4a_         575 VRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD  618 (643)
T ss_dssp             HHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHHHHHTC
T ss_pred             HHHHHHhhCCcccCccEEEEECCCCCCCCcCccHHHHHHHhcCC
Confidence            88888899999999999999999999999999999999999764
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure