Citrus Sinensis ID: 010440


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
MLWSEKLNWVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASKLLHSPDASSSDKPLKGKSFIRFETVTFVRPKESASKQNEMQTITGMVEAIILEVKERERIGGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQISEEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMGDDFDEETVSLTSSGIKNVEMAANLGEDLEEDKRE
cccccccHHHHHHHHHHHHHHHHccccEEEccccccccccccccEEEEEcccEEEEEccccccccccccccccccccEEEEEEEEEEccccHHHHHcccccccccEEEEEEEEEEccccccccccccccccccccccccccccccEEEEcccccccccEEEEEEEccccccccccEEEEEccccEEEEEEEEEccccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccEEEEHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHcccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccccEEEEEcccccEEEcccccccccccccccccccEEEEEEEEEEEEcHHHHHHccHccccccEEEEEEEEEccHHHccccccccEEEEEcHHHHHcccccccEEEEEccccccccccEEEEEEcccccccccccEEEEccccEEEEEEEEEcccccccEEEEEEEEEcccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHccccccccccccccccccccHcccc
mlwseklnWVVFYFVGILCVCSLITNvsgsiheykneafypksnafffhggseglyaskllhspdasssdkplkgksfirfetvtfvrpkesaskqnEMQTITGMVEAIILEVKEReriggsflktDLLCcthnlskegscsvgeviihvdpenhewpRRIKAFFQgtneetqisEEVEIERTGMYYLYFMycdpqlkgtmikgrtvwknpdgylpgkmaplmTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYanfnstgsrpmgITLWAVTFTSVKKTVSRLLLLAVSMGygvvrptlgglTFKVIFLGLVYFVASEALEMFENLgnindfsgkakLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICAlwapsrnptryayseemgddfdeETVSLTSSGIKNVEMAANLGedleedkre
MLWSEKLNWVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASKLLHSPDAsssdkplkgksfirfetvtfvrpkesaskqnemqtITGMVEAIILEVKERERIGGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFfqgtneetqiseevEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMGDDFDEETVSLTSSGIKNVEMaanlgedleedkre
MLWSEKLNWVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASKLLHSPDASSSDKPLKGKSFIRFETVTFVRPKESASKQNEMQTITGMVEAIILEVKERERIGGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNeetqiseeveieRTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMGDDFDEETVSLTSSGIKNVEMAANLGEDLEEDKRE
**WSEKLNWVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASK******************FIRFETVTFV*************TITGMVEAIILEVKERERIGGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQISEEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRN***Y*****************************************
******LNWVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYA***************LKGKSFIRFETVTFV*****************MVEAIILEVKERERIGGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRR***************EEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAY***************************************
MLWSEKLNWVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASKLLH**********LKGKSFIRFETVTFVRPKESASKQNEMQTITGMVEAIILEVKERERIGGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQISEEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMGDDFDEETVSLTSSGIKNVEMAANLG*********
MLWSEKLNWVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYAS**************LKGKSFIRFETVTFVRPKESASKQN*MQTITGMVEAIILEVKERERIGGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQISEEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMG**********************************
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLWSEKLNWVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASKLLHSPDASSSDKPLKGKSFIRFETVTFVRPKESASKQNEMQTITGMVEAIILEVKERERIGGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQISEEVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMGDDFDEETVSLTSSGIKNVEMAANLGEDLEEDKRE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query510 2.2.26 [Sep-21-2011]
Q8BKU8555 Transmembrane protein 87B yes no 0.519 0.477 0.390 9e-47
Q28EW0541 Transmembrane protein 87A yes no 0.511 0.482 0.368 7e-46
Q96K49555 Transmembrane protein 87B yes no 0.525 0.482 0.365 1e-45
Q8NBN3555 Transmembrane protein 87A no no 0.5 0.459 0.353 1e-38
Q8BXN9555 Transmembrane protein 87A no no 0.5 0.459 0.349 8e-38
O13989505 Uncharacterized protein C yes no 0.592 0.598 0.261 7e-18
A6ZZS6523 Membrane protein PTM1 OS= N/A no 0.547 0.533 0.237 9e-15
P32857523 Membrane protein PTM1 OS= yes no 0.547 0.533 0.237 1e-14
P38745532 Uncharacterized membrane no no 0.747 0.716 0.229 1e-08
Q8BUV8551 Protein GPR107 OS=Mus mus no no 0.594 0.549 0.227 5e-05
>sp|Q8BKU8|TM87B_MOUSE Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1 Back     alignment and function desciption
 Score =  188 bits (477), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 107/274 (39%), Positives = 160/274 (58%), Gaps = 9/274 (3%)

Query: 211 PDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCEVA 270
           P GY+     PLM FY +M + Y++ G+ W L     WKDI+++ ++I  VI LGM E A
Sbjct: 206 PHGYISASDWPLMIFYMVMCIVYILYGVLWLLWSACYWKDILRIQFWIAAVIFLGMLEKA 265

Query: 271 VWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVI 330
           V+Y EY N NSTG    G+ ++A   ++VK+T++RLL++ VS+GYG+V+P LG +  +VI
Sbjct: 266 VFYSEYQNINSTGLSTQGLLIFAELISAVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVI 325

Query: 331 FLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLP---VTVLDVCFILWIFSSLSRTLE 387
            LGL+Y + + A+E     G +    G   L  VL    + V+D  F+ +IF SL++T++
Sbjct: 326 GLGLLYLIFA-AIE-----GVMRVIGGSKHLAVVLTDIVLAVIDSIFVWFIFISLAQTMK 379

Query: 388 KLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDPLNELWQIAWIIPAFWAL 447
            L++R+N  K  LYR FTN L   VL SI ++ +             W   W+  AFW+ 
Sbjct: 380 TLRLRKNTVKFSLYRHFTNTLIFAVLASIVFMVWTTKTFRIAKCQSDWMELWVDDAFWSF 439

Query: 448 LAFILLVVICALWAPSRNPTRYAYSEEMGDDFDE 481
           L  ++L+VI  LW PS N  RYA+   + D  DE
Sbjct: 440 LFSVILIVIMFLWRPSANNQRYAFMPLIDDSDDE 473





Mus musculus (taxid: 10090)
>sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2 SV=1 Back     alignment and function description
>sp|Q96K49|TM87B_HUMAN Transmembrane protein 87B OS=Homo sapiens GN=TMEM87B PE=1 SV=1 Back     alignment and function description
>sp|Q8NBN3|TM87A_HUMAN Transmembrane protein 87A OS=Homo sapiens GN=TMEM87A PE=1 SV=3 Back     alignment and function description
>sp|Q8BXN9|TM87A_MOUSE Transmembrane protein 87A OS=Mus musculus GN=Tmem87a PE=1 SV=1 Back     alignment and function description
>sp|O13989|YEG7_SCHPO Uncharacterized protein C26H5.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.07c PE=3 SV=2 Back     alignment and function description
>sp|A6ZZS6|PTM1_YEAS7 Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain YJM789) GN=PTM1 PE=3 SV=1 Back     alignment and function description
>sp|P32857|PTM1_YEAST Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTM1 PE=1 SV=2 Back     alignment and function description
>sp|P38745|YHB7_YEAST Uncharacterized membrane protein YHL071W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHL017W PE=1 SV=1 Back     alignment and function description
>sp|Q8BUV8|GP107_MOUSE Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query510
225448713524 PREDICTED: transmembrane protein 87B [Vi 0.982 0.956 0.696 0.0
224091120485 predicted protein [Populus trichocarpa] 0.941 0.989 0.735 0.0
147828308520 hypothetical protein VITISV_015392 [Viti 0.976 0.957 0.677 0.0
225439703520 PREDICTED: transmembrane protein 87A [Vi 0.976 0.957 0.675 0.0
357490249541 Transmembrane protein 87B [Medicago trun 0.962 0.907 0.664 0.0
356520814500 PREDICTED: transmembrane protein 87B-lik 0.913 0.932 0.720 0.0
449522001539 PREDICTED: transmembrane protein 87B-lik 0.984 0.931 0.630 0.0
449457393539 PREDICTED: transmembrane protein 87B-lik 0.984 0.931 0.628 0.0
297840387511 hypothetical protein ARALYDRAFT_893342 [ 0.974 0.972 0.679 0.0
42562863513 Lung seven transmembrane receptor family 0.978 0.972 0.683 0.0
>gi|225448713|ref|XP_002280844.1| PREDICTED: transmembrane protein 87B [Vitis vinifera] gi|297736477|emb|CBI25348.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/520 (69%), Positives = 425/520 (81%), Gaps = 19/520 (3%)

Query: 9   WVVFYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASKLLHSPDASS 68
           W +  F+G + + S  T V  SIHEY+NE F  + N++FFHGGSEGLYASKL H P  +S
Sbjct: 6   WDLVRFLGFMLLWSSATVVQASIHEYRNEGFSRRLNSYFFHGGSEGLYASKL-HLPHPNS 64

Query: 69  SDKPLKGKSFIRFETVTFVRPKESASKQNEMQTITGMVEAIILEVKERERIGGSFLKTDL 128
            DKPL GKSFIRFE++TF R KE+  KQNEMQ  TG++EAII+EVK+R RIGGS+  TD+
Sbjct: 65  EDKPLNGKSFIRFESITFRRTKETTEKQNEMQQKTGLIEAIIVEVKDRGRIGGSYENTDV 124

Query: 129 LCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQISEEVEIERTGMYYL 188
           +CC   L+++GSC VGEVII  DP N +WP+RI+  F+G NEE  + + VEI  TGMYYL
Sbjct: 125 ICCNPKLAEQGSCKVGEVIIRQDPNNPDWPKRIQTSFEGKNEEATLIQTVEINSTGMYYL 184

Query: 189 YFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLW 248
           YFM+CDPQLKGT++ GRTVW+NPDGYLPGKMAPLMTF G MSLAYLVLGL WFL+FVQ W
Sbjct: 185 YFMFCDPQLKGTILSGRTVWRNPDGYLPGKMAPLMTFSGFMSLAYLVLGLVWFLQFVQYW 244

Query: 249 KDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLL 308
           KDII LHY+IT VI LGMCE+A WYFEYANFNSTG+RPMGITLWAVTF++VKKTVSRLLL
Sbjct: 245 KDIIHLHYHITAVIGLGMCEMAFWYFEYANFNSTGNRPMGITLWAVTFSAVKKTVSRLLL 304

Query: 309 LAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVT 368
           L VSMGYGVVRPTLGG+T KV+ LG +YFVA+EALE+ E+LGNINDFSGKAK+F VLPV 
Sbjct: 305 LVVSMGYGVVRPTLGGITPKVLLLGFMYFVATEALELVEHLGNINDFSGKAKVFLVLPVA 364

Query: 369 VLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNAT 428
           +LD CFILWIFSSLS+TLEKLQMRR++AK+ELYRKFTNALA  VLLS+AWIG+ELYFNA+
Sbjct: 365 LLDACFILWIFSSLSKTLEKLQMRRSMAKMELYRKFTNALAVSVLLSVAWIGYELYFNAS 424

Query: 429 DPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMGDDFDEETVSLTS 488
           DPL+ELW+ AWIIPAFW LLA+I+LVVIC LWAPS NPTR+AY EE GDD +EE VSLT+
Sbjct: 425 DPLSELWRRAWIIPAFWTLLAYIILVVICILWAPSHNPTRFAYLEEAGDDLEEEGVSLTT 484

Query: 489 SGIK--------------NVEMAAN----LGEDLEEDKRE 510
           SG+K               V +AA+    LGED EEDKRE
Sbjct: 485 SGVKVAGDVATKLERKERKVSIAADHVYGLGEDPEEDKRE 524




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091120|ref|XP_002309185.1| predicted protein [Populus trichocarpa] gi|222855161|gb|EEE92708.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147828308|emb|CAN66485.1| hypothetical protein VITISV_015392 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225439703|ref|XP_002272360.1| PREDICTED: transmembrane protein 87A [Vitis vinifera] gi|297735536|emb|CBI18030.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357490249|ref|XP_003615412.1| Transmembrane protein 87B [Medicago truncatula] gi|355516747|gb|AES98370.1| Transmembrane protein 87B [Medicago truncatula] Back     alignment and taxonomy information
>gi|356520814|ref|XP_003529055.1| PREDICTED: transmembrane protein 87B-like [Glycine max] Back     alignment and taxonomy information
>gi|449522001|ref|XP_004168017.1| PREDICTED: transmembrane protein 87B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449457393|ref|XP_004146433.1| PREDICTED: transmembrane protein 87B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297840387|ref|XP_002888075.1| hypothetical protein ARALYDRAFT_893342 [Arabidopsis lyrata subsp. lyrata] gi|297333916|gb|EFH64334.1| hypothetical protein ARALYDRAFT_893342 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42562863|ref|NP_176360.2| Lung seven transmembrane receptor family protein [Arabidopsis thaliana] gi|26450505|dbj|BAC42366.1| unknown protein [Arabidopsis thaliana] gi|332195751|gb|AEE33872.1| Lung seven transmembrane receptor family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query510
TAIR|locus:2195758513 AT1G61670 "AT1G61670" [Arabido 0.978 0.972 0.673 1.7e-185
TAIR|locus:2194017509 AT1G72480 "AT1G72480" [Arabido 0.911 0.913 0.512 3.7e-133
TAIR|locus:2197449516 AT1G10980 "AT1G10980" [Arabido 0.927 0.916 0.470 1.8e-119
TAIR|locus:2045766496 AT2G01070 "AT2G01070" [Arabido 0.9 0.925 0.474 2.5e-119
MGI|MGI:1919727555 Tmem87b "transmembrane protein 0.554 0.509 0.377 2.3e-48
UNIPROTKB|F6X9D0556 TMEM87B "Uncharacterized prote 0.525 0.482 0.375 6e-48
UNIPROTKB|E2RFT6551 TMEM87B "Uncharacterized prote 0.519 0.480 0.381 1.2e-47
UNIPROTKB|F1SU90552 LOC100737870 "Uncharacterized 0.543 0.501 0.369 1.2e-47
UNIPROTKB|F1SU99553 LOC100737870 "Uncharacterized 0.543 0.500 0.369 1.2e-47
UNIPROTKB|Q96K49555 TMEM87B "Transmembrane protein 0.560 0.515 0.353 2.6e-47
TAIR|locus:2195758 AT1G61670 "AT1G61670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1799 (638.3 bits), Expect = 1.7e-185, P = 1.7e-185
 Identities = 341/506 (67%), Positives = 405/506 (80%)

Query:    12 FYFVGILCVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASKLLHSPDASSSDK 71
             F+ +G+L + SLI    GSIHEY NE F  K NA FFHGGSEGLYASK      +SSSD 
Sbjct:     8 FWAIGVLLIGSLIGATEGSIHEYNNEKFTAKFNARFFHGGSEGLYASKSQDLNSSSSSDN 67

Query:    72 PLKGKSFIRFETVTFVRPKESASKQNEMQTITGMVEAIILEVKERERIGGSFLKTDLLCC 131
               KGKSFIRF+ VTFVR KESASKQN MQ+ +G+VEAIILEVK+R+RIGG+FLK++++CC
Sbjct:    68 SFKGKSFIRFDDVTFVRTKESASKQNAMQSTSGLVEAIILEVKDRDRIGGTFLKSEVICC 127

Query:   132 THNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNXXXXXX-XXXXXXRTGMYYLYF 190
             T  L+  GSCS+GEVII  +  + EWPR+IK FF+G               +TGMYYLYF
Sbjct:   128 TPELADTGSCSLGEVIIKRESNDVEWPRQIKTFFKGNKTEVNMSPETVVINKTGMYYLYF 187

Query:   191 MYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKD 250
             M CDP+L GT IKGRTVWKNPDGYLPGK+APLM  +G MSLAY++LGL WF+RFVQ WKD
Sbjct:   188 MICDPELDGTRIKGRTVWKNPDGYLPGKVAPLMNVFGFMSLAYILLGLVWFVRFVQFWKD 247

Query:   251 IIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLA 310
             IIQLHY+IT VIALGMCE+AV YFEY NFNSTG RPM +TLWAVTF+S+KKT+SRLLLL 
Sbjct:   248 IIQLHYHITLVIALGMCEMAVRYFEYVNFNSTGMRPMDVTLWAVTFSSIKKTLSRLLLLV 307

Query:   311 VSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKAKLFFVLPVTVL 370
             VSMGYGVV+PTLGG+T +++ LG++YFVA+EALE+ E+LGNINDFSGK  +  V+PV +L
Sbjct:   308 VSMGYGVVKPTLGGITSRILLLGVIYFVATEALELVEHLGNINDFSGKTMIVLVIPVALL 367

Query:   371 DVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWIGFELYFNATDP 430
             D CFILWIFSSL+RTLEKLQ++RN+AKLELYR FTNALA  VLLSIAWIGFELYFN TDP
Sbjct:   368 DACFILWIFSSLARTLEKLQIKRNMAKLELYRNFTNALAISVLLSIAWIGFELYFNGTDP 427

Query:   431 LNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMGDDFDEETVSLTSSG 490
             L ELW++AWIIPAFW LL++ LL VIC LWAPS NPTRY+Y  E GD+F+EE +SLT SG
Sbjct:   428 LIELWRMAWIIPAFWNLLSYGLLAVICILWAPSNNPTRYSYLAETGDEFEEEGISLTGSG 487

Query:   491 IKNVE------MAANLGEDLEEDKRE 510
             IK+ E      +   L +D+EE KRE
Sbjct:   488 IKSTEDVERNELLFGLPDDVEEGKRE 513




GO:0003674 "molecular_function" evidence=ND
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0016021 "integral to membrane" evidence=IEA
TAIR|locus:2194017 AT1G72480 "AT1G72480" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197449 AT1G10980 "AT1G10980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045766 AT2G01070 "AT2G01070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1919727 Tmem87b "transmembrane protein 87B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F6X9D0 TMEM87B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFT6 TMEM87B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SU90 LOC100737870 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1SU99 LOC100737870 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q96K49 TMEM87B "Transmembrane protein 87B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query510
pfam06814287 pfam06814, Lung_7-TM_R, Lung seven transmembrane r 1e-125
>gnl|CDD|219188 pfam06814, Lung_7-TM_R, Lung seven transmembrane receptor Back     alignment and domain information
 Score =  366 bits (941), Expect = e-125
 Identities = 148/289 (51%), Positives = 191/289 (66%), Gaps = 3/289 (1%)

Query: 180 IERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLA 239
           I++TG+Y LYF         T +KG+  WKNP GYL    APLM FYG+MSLAY++LG  
Sbjct: 1   IKKTGLYCLYFH--SGSKSSTALKGKVNWKNPYGYLSASEAPLMPFYGIMSLAYVLLGAL 58

Query: 240 WFLRFVQLWKDIIQLHYYITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSV 299
           WF    + W DI+ L  YI  VIALGM E+A  Y +YA  NS GS P G+ ++A   +++
Sbjct: 59  WFFILFKYWHDILPLQKYIAAVIALGMVELAFHYIDYAFINSKGSSPEGLAVFASILSAL 118

Query: 300 KKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVYFVASEALEMFENLGNINDFSGKA 359
           KKT+SR+LLL VS+GYG+V+PTLG    KV  +GL+YFVA+  L +    G  +D S K 
Sbjct: 119 KKTLSRILLLIVSLGYGIVKPTLGDTLKKVAGIGLLYFVAACVLFIVRESGIESDSSYKL 178

Query: 360 KLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSIAWI 419
            LFF+LP+ +LD+ FI WIF SLS+TL  L++RRNL KL LYR FTN LA  V+ S   I
Sbjct: 179 VLFFLLPLALLDLFFIYWIFRSLSKTLRDLKLRRNLVKLSLYRHFTNMLACSVVASFIII 238

Query: 420 GFE-LYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPT 467
             E +YF  TD  N+ W+ AW+I AFW LL+ +LLV IC LW PS+N  
Sbjct: 239 LVEKIYFKTTDSCNKYWKTAWLITAFWELLSLVLLVTICYLWRPSQNNP 287


This family represents a conserved region with eukaryotic lung seven transmembrane receptors and related proteins. Length = 287

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 510
KOG2568518 consensus Predicted membrane protein [Function unk 100.0
PF06814295 Lung_7-TM_R: Lung seven transmembrane receptor; In 100.0
KOG2569440 consensus G protein-coupled seven transmembrane re 100.0
PF10192257 GpcrRhopsn4: Rhodopsin-like GPCR transmembrane dom 99.63
KOG4290429 consensus Predicted membrane protein [Function unk 98.9
PF06664298 MIG-14_Wnt-bd: Wnt-binding factor required for Wnt 93.13
>KOG2568 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=1.4e-112  Score=899.79  Aligned_cols=482  Identities=46%  Similarity=0.777  Sum_probs=443.0

Q ss_pred             HHhhhhccccceeecccCCCcccCCCeEEEecCCceeecccCCCCCCCCCCCCCCCCCceeEEeeeEeecCccccccccc
Q 010440           19 CVCSLITNVSGSIHEYKNEAFYPKSNAFFFHGGSEGLYASKLLHSPDASSSDKPLKGKSFIRFETVTFVRPKESASKQNE   98 (510)
Q Consensus        19 ~~~~~~~~~~~s~h~y~~~~f~~~~~~~~~~~~~eg~y~~~~~~~~~~~~~~~~~~~~s~i~f~~~~f~~~~~~~~~~~~   98 (510)
                      +.|++.+.+.+|+|+|..+.|....|++.+|||+||+|+|..   .|+.++..|   .|+|||+++++.|+++.++++|+
T Consensus         7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ys~~~---~d~~~s~~p---~~~~~f~~~t~~~~~~~~~~~n~   80 (518)
T KOG2568|consen    7 LRLLISLLAWLSFLSYVYSEFASELNAQHFHGVSEGIYSSFV---SDLFGSLDP---ESFIRFDSITLVRTSESADEQNS   80 (518)
T ss_pred             HHHHHHHhhhHhheechhhhhhhhhcceeeeccccccccccH---HHhcCCCCc---cccccceeEEEEEccCccccccc
Confidence            344444455999999999999999999999999999999854   566666666   89999999999999987766654


Q ss_pred             cccccceEEEEEEeeccccccCcccC-CCeeeecCccccccCCCCCCCEEecCCCCCCCCceeeeeeeccCcccccc-ce
Q 010440           99 MQTITGMVEAIILEVKERERIGGSFL-KTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEWPRRIKAFFQGTNEETQI-SE  176 (510)
Q Consensus        99 ~~~~~g~v~~vIfe~~D~~~iG~~~~-g~~~~cC~~~~~~~g~C~~g~~Ii~~~~~~~~~~~~~~~~f~~~~~~~~l-~~  176 (510)
                          .|.|+++|||+||+++||++.+ |++.||||+++++.|.|++|++|+.|+++||.||++..+.+++++.+..+ +.
T Consensus        81 ----~~~v~~~ife~kd~~~iG~~~~~~e~~~~C~~~~~~~g~c~~~~~i~~~~~~dp~~~~~~~~~~t~~~~e~~m~~~  156 (518)
T KOG2568|consen   81 ----NGLVEALIFEFKDRNKIGGSDDDGEKLYICTPDLADTGSCKEGEVIYLPNPTDPEWPKLNSVILTFNDAEVGMSPP  156 (518)
T ss_pred             ----ccceeeeeeehhhhhccCCcCCCCceEEecCHhHHhcCCcCCCceEEecCCCCCCcccccceeecccccccCCCCc
Confidence                4899999999999999999998 99999999999999999999999999999999999999999999887888 89


Q ss_pred             eEEecccceEEEEEEEeCCCCCceEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Q 010440          177 EVEIERTGMYYLYFMYCDPQLKGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLMSLAYLVLGLAWFLRFVQLWKDIIQLHY  256 (510)
Q Consensus       177 ~y~V~ktG~Y~v~~~~C~~~~~~~~~~g~v~f~N~~GyLpa~e~pll~fY~~msi~Y~vl~~~W~~~~~k~r~~il~lq~  256 (510)
                      .|+|+|||+||+++..|+++.++.+.+|+|+||||||||||+++|++|||++|+++|.+++++|+++|+|||||++|||+
T Consensus       157 ~~~I~ktG~Y~v~~~~~~~s~~~~~~~~~v~wkNpyGyL~a~~~Plm~fy~~m~laYvllgllW~~~~~~y~~diL~lQ~  236 (518)
T KOG2568|consen  157 AYPIKKTGYYCVYFISCDSSLESYKATGSVNWKNPYGYLPASDAPLMPFYGFMCLAYVLLGLLWFFQCAQYWHDILPLQK  236 (518)
T ss_pred             eEEeccCcEEEEEEEeecCccccccccceEEEECCCCCcChhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhheecccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccceeEEehhHH
Q 010440          257 YITGVIALGMCEVAVWYFEYANFNSTGSRPMGITLWAVTFTSVKKTVSRLLLLAVSMGYGVVRPTLGGLTFKVIFLGLVY  336 (510)
Q Consensus       257 ~I~avl~l~~le~~~~~~~y~~~N~~G~~~~~~~v~~~i~~a~k~tls~~LlLlVslGyGvVrp~L~~~~~kv~~l~v~y  336 (510)
                      ||++|++|+|+|++++|++|.++|.+|.+|++.++++++++|+|+|++|+|+|+||||||||||+||+.+.|+..++++|
T Consensus       237 ~I~~Vi~lgm~E~av~y~~y~~~N~tG~~~~~~~~~a~i~sa~K~Tlsr~LlLIVSlGYGIVkP~Lg~~l~rv~~ig~~~  316 (518)
T KOG2568|consen  237 YITAVIALGMAETAVFYSEYANFNSTGMSPKVYTVFASILSAIKKTLSRLLLLIVSLGYGIVKPTLGGTLLRVCQIGVIY  316 (518)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcceEecCcchHHHHHHHHhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCcceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 010440          337 FVASEALEMFENLGNINDFSGKAKLFFVLPVTVLDVCFILWIFSSLSRTLEKLQMRRNLAKLELYRKFTNALAACVLLSI  416 (510)
Q Consensus       337 fv~s~~l~v~~~v~~~~d~s~~~~L~lvlpla~l~a~f~~WI~~sL~~Ti~~Lk~~rq~~KL~mYr~f~~~l~~~vi~s~  416 (510)
                      |++++++.+++.++++++.++...+|.++|+|+++++|++|||+||++|+++||.|||.+||+|||||.++|+++|++++
T Consensus       317 ~i~s~i~~l~~~~g~~se~~~~~~lf~~ip~ai~d~~f~~wIF~SL~~Tlk~Lr~rRn~vKl~lYr~F~n~l~~~Vvas~  396 (518)
T KOG2568|consen  317 FIASEILGLARVIGNISELSSLLILFAALPLAILDAAFIYWIFISLAKTLKKLRLRRNIVKLSLYRKFTNTLAFSVVASF  396 (518)
T ss_pred             HHHHHHHHHHHHhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhheeecccccchhHHHHhHHHHHHHHHHHHHHHHHhhhcccCCCCCcccccccCCCCcccc-cceeccCc-----
Q 010440          417 AWIGFELYFNATDPLNELWQIAWIIPAFWALLAFILLVVICALWAPSRNPTRYAYSEEMGDDFDEE-TVSLTSSG-----  490 (510)
Q Consensus       417 ~~i~~~l~f~~~~~~~~~Wk~~W~i~~~w~~l~f~~~~~I~~LWRPt~~n~~~A~s~E~~~d~d~e-~~~l~~~~-----  490 (510)
                      +|++++.++.+..+++++||.+|+++++|++++|.++++||+|||||+||+|||++++.+||.||| +-++....     
T Consensus       397 ~~i~~~~~~~~~~~~~~~Wk~~Wv~~a~W~~l~~~iLvvI~~LWrPS~nn~ryA~s~l~~d~~ee~~~~~~~~~~~~~~~  476 (518)
T KOG2568|consen  397 AFILVETIFYSIMSCNKDWKERWVDTAFWPLLFFLILVVIMFLWRPSQNNQRYAFSPLSDDDEEEEEEESLDLLESLTEG  476 (518)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHhhhhhccHHHHHHHHHHHHHHhcCCCCCCcccccccccCCcchhhhhhhhhhccccccc
Confidence            999999888777789999999999999999999999999999999999999999999887776444 23333221     


Q ss_pred             -c-cccccc----------ccCCCCcchhccC
Q 010440          491 -I-KNVEMA----------ANLGEDLEEDKRE  510 (510)
Q Consensus       491 -~-~~~~~~----------~~~~~~~~~~~~~  510 (510)
                       . ...|++          -+.+||+||+|||
T Consensus       477 ~~~~~~k~~~~~~~~~~~~~~~~dDle~~~~~  508 (518)
T KOG2568|consen  477 AKSRADKRKSLGKADPNKALNFEDDLEEVEEE  508 (518)
T ss_pred             Cccccccccccccccccchhchhhhhhccccc
Confidence             1 222222          4567899999986



>PF06814 Lung_7-TM_R: Lung seven transmembrane receptor; InterPro: IPR009637 This family represents a conserved region with eukaryotic lung seven transmembrane receptors and related proteins Back     alignment and domain information
>KOG2569 consensus G protein-coupled seven transmembrane receptor [Signal transduction mechanisms] Back     alignment and domain information
>PF10192 GpcrRhopsn4: Rhodopsin-like GPCR transmembrane domain; InterPro: IPR019336 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>KOG4290 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF06664 MIG-14_Wnt-bd: Wnt-binding factor required for Wnt secretion Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query510
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 68/461 (14%), Positives = 133/461 (28%), Gaps = 129/461 (27%)

Query: 62  HSPDASSSDKPLKGKSFIRFETVTFVRPKESASKQNEMQTI--TGMVEAIILEVKERERI 119
           H  D  + +   + K  +      FV   +    Q+  ++I     ++ I   +  ++ +
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHI---IMSKDAV 61

Query: 120 GGSFLKTDLLCCTHNLSKEGSCSVGEVIIHVDPENHEW-PRRIKAFFQGTNEETQISEEV 178
            G+      L        +    V + +  V   N+++    IK   +  +  T++  E 
Sbjct: 62  SGTLRLFWTLL------SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE- 114

Query: 179 EIERTGMYYLYFMYCDPQL--KGTMIKGRTVWKNPDGYLPGKMAPLMTFYGLM------S 230
           + +R        +Y D Q+  K  + + +   K     L  + A  +   G +       
Sbjct: 115 QRDR--------LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VLGSGKTW 165

Query: 231 LAYLVLGLAWFLRFVQLWKDIIQLHYYITGVIALGMCE---------VAVWYFEYANFNS 281
           +A  V       +        I   +++     L  C            + Y    N+ S
Sbjct: 166 VALDVCL---SYKVQCKMDFKI---FWLN----LKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 282 TGSRPMGITLWAVTFTSVKKTVSRLL--------LL------------AVSMG------- 314
                  I L      S++  + RLL        LL            A ++        
Sbjct: 216 RSDHSSNIKL---RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272

Query: 315 -YGVVRPTLGGLTFKVIFLGLVY--FVASEALEMFENLGNINDFSGKAKLFFVLPVTVLD 371
            +  V   L   T   I L          E   +     +             LP  VL 
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD--------LPREVLT 324

Query: 372 VC-FILWIFSSLSRTLEKLQMRRNLAKLELYR-----KFTNALAACVLLSIAWIGFELYF 425
                L I +          +R  LA  + ++     K T  + + +             
Sbjct: 325 TNPRRLSIIAES--------IRDGLATWDNWKHVNCDKLTTIIESSL------------- 363

Query: 426 NATDPLNELWQIAWIIPAFWALLAF-----ILLVVICALWA 461
           N  +P  E  ++      F  L  F     I  +++  +W 
Sbjct: 364 NVLEP-AEYRKM------FDRLSVFPPSAHIPTILLSLIWF 397


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00