Citrus Sinensis ID: 010457


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
MTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKGESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQKTNKHTKREPSTFPPLTSEEQELLQKVALRNRVPGISKSLDFDKIRLKRYDRLSKSSGQSPQRGSKELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR
cccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccccccEEEEHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHccccccc
cccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHccccHHHHHHHHHHHHHHHHHHHHHHcHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHcccccccccccccccccccccccccccccccEEEccccHHHHHHHHccccccc
mtnlnpnngfsgvgtksnELSILAFEVANTIVKGSNLMLSISESSVRQLKEVvlpaegvqnlVSKDMDELLKIFAAdkrddlkiftgevvrfgnrskdpqwhnlGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQhkrqeednpvgsqkgESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHdafgstddhfpfkgsmsnhqrlgpaGLALHYANIILQIDSLvarsssmppstrdalyqslppSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIAtntakahhgfgwvgewanlgsdlnrkpagptdviRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAikypvgtsiqktnkhtkrepstfppltsEEQELLQKVALRnrvpgisksldfdKIRLKRYdrlskssgqspqrgskelattkrlpshvpiigfgiekekaldvidrvdvlr
mtnlnpnngfsgvgtKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLpaegvqnlvsKDMDELLKIFaadkrddlkiftgevvrfgnrskdpqwhnLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRqeednpvgsqkgeSFAILRAELKsqrkqvkilrkkslwsrsLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGtsiqktnkhtkrepstfppltsEEQELLQKValrnrvpgisksldfdkirlkrydrlskssgqspqrgskelattkrlpshvpiigfgiekekaldvidrvdvlr
MTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKGESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQKTNKHTKREPSTFPPLTSEEQELLQKVALRNRVPGISKSLDFDKIRLKRYDRLSKSSGQSPQRGSKELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR
******************ELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFE***********************************VKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKG****HQRLGPAGLALHYANIILQIDSLV*******************************SFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVG*********************************************F**********************************HVPIIGFGIEKEKALDVIDRV****
*********************ILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQD****************************S*RKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFG***********************ALHYANIILQIDSL***********RDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGE******************IRLETLYHADKEKTEAYILDLLLWLHQLVN********************************************QELLQKVA***************************************************IIGFGIEKEKALDVIDRVDVL*
MTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDC**************KGESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVAR**********ALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSI*****************TSEEQELLQKVALRNRVPGISKSLDFDKIRLKRYDR*****************TTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR
*****************NELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEE********GESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTD*************RLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSD*****AGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFG**********************************LTSEEQELLQKVALRN********************************************SHVPIIGFGIEKEKALDVIDRVDV**
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MTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPxxxxxxxxxxxxxxxxxxxxxTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKGESxxxxxxxxxxxxxxxxxxxxxSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQKTNKHTKREPSTFPPLTSEEQELLQKVALRNRVPGISKSLDFDKIRLKRYDRLSKSSGQSPQRGSKELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query510
255586811 637 conserved hypothetical protein [Ricinus 0.996 0.797 0.669 0.0
356574581 662 PREDICTED: uncharacterized protein LOC10 0.992 0.764 0.662 0.0
356533999 667 PREDICTED: uncharacterized protein LOC10 0.992 0.758 0.662 0.0
224135475 649 predicted protein [Populus trichocarpa] 0.994 0.781 0.645 0.0
297735822 653 unnamed protein product [Vitis vinifera] 0.998 0.779 0.659 0.0
225463926 655 PREDICTED: uncharacterized protein LOC10 0.998 0.777 0.656 0.0
296082638568 unnamed protein product [Vitis vinifera] 0.988 0.887 0.638 0.0
449443881 652 PREDICTED: uncharacterized protein LOC10 0.996 0.779 0.630 0.0
224126719 659 predicted protein [Populus trichocarpa] 0.994 0.769 0.616 0.0
15218580 657 uncharacterized protein [Arabidopsis tha 0.996 0.773 0.625 0.0
>gi|255586811|ref|XP_002534019.1| conserved hypothetical protein [Ricinus communis] gi|223525970|gb|EEF28360.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/514 (66%), Positives = 419/514 (81%), Gaps = 6/514 (1%)

Query: 1   MTNLNPNNGF-SGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGV 59
           MTNLN ++GF SGV TK N++SILAFEVANTIVKG+NLM S+S+ + + LKEVVLP+EGV
Sbjct: 124 MTNLNLSSGFTSGVTTKGNKISILAFEVANTIVKGANLMQSLSKENTKHLKEVVLPSEGV 183

Query: 60  QNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQK 119
           QNL+S+DMDELL+I AADKR++LK+F+GEVVRFGNR KDPQWHNL RYFEK+  EL P+K
Sbjct: 184 QNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCKDPQWHNLDRYFEKLGSELTPEK 243

Query: 120 QLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKGESFAILR 179
           QLK+EAE++M+QLM LVQ+TAELY+E+  LDRFEQD + K QE+D+  G Q+G+S AILR
Sbjct: 244 QLKEEAEIVMKQLMNLVQYTAELYHEMHALDRFEQDYRRKLQEDDSSNGPQRGDSLAILR 303

Query: 180 AELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSN 239
           AELKSQRK VK L+KKSLWS+ LEEVMEKLVDIV FL LE+H+AFGS D   P KGS  +
Sbjct: 304 AELKSQRKHVKSLKKKSLWSKILEEVMEKLVDIVHFLHLEIHEAFGSADGDRPVKGSSIS 363

Query: 240 HQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVK 299
           H++LG AGLALHYANII QID+LV+RSSS+PP+TRDALYQ LPPSIKSALR KLQS HVK
Sbjct: 364 HKKLGSAGLALHYANIITQIDTLVSRSSSVPPNTRDALYQGLPPSIKSALRCKLQSLHVK 423

Query: 300 EEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLE 359
           EE TVAQIK EME+TLQWLVPIATNT KAHHGFGWVGEWAN GS++NRKP G TD++R+E
Sbjct: 424 EELTVAQIKAEMEQTLQWLVPIATNTTKAHHGFGWVGEWANTGSEVNRKPTGQTDLLRIE 483

Query: 360 TLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQKTNKHTKREP 419
           TL+HADKEKTE YILDL++ LH LV++AR     GG++S +K P+ +  QKT + +  +P
Sbjct: 484 TLHHADKEKTETYILDLVVRLHHLVSQAR--ATNGGIRSPVKSPIRSPNQKTIQLSTHKP 541

Query: 420 ST-FPPLTSEEQELLQKVALRNRVPGISKSLDFD--KIRLKRYDRLSKSSGQSPQRGSKE 476
           S+  P LT E+QE+L+ V  R + PGISKS +FD  K RL ++ RLSKSS  SP   +K+
Sbjct: 542 SSPLPMLTVEDQEMLRDVPKRKKTPGISKSQEFDTAKTRLCKHHRLSKSSSHSPMTETKK 601

Query: 477 LATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR 510
                R PS VP+I F I++ KALDVIDRVD +R
Sbjct: 602 DPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIR 635




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574581|ref|XP_003555424.1| PREDICTED: uncharacterized protein LOC100811297 [Glycine max] Back     alignment and taxonomy information
>gi|356533999|ref|XP_003535545.1| PREDICTED: uncharacterized protein LOC100812676 [Glycine max] Back     alignment and taxonomy information
>gi|224135475|ref|XP_002327227.1| predicted protein [Populus trichocarpa] gi|222835597|gb|EEE74032.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297735822|emb|CBI18542.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225463926|ref|XP_002266039.1| PREDICTED: uncharacterized protein LOC100263351 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082638|emb|CBI21643.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449443881|ref|XP_004139704.1| PREDICTED: uncharacterized protein LOC101220504 [Cucumis sativus] gi|449516605|ref|XP_004165337.1| PREDICTED: uncharacterized protein LOC101226834 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224126719|ref|XP_002329456.1| predicted protein [Populus trichocarpa] gi|222870136|gb|EEF07267.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15218580|ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana] gi|37202044|gb|AAQ89637.1| At1g34320 [Arabidopsis thaliana] gi|51970944|dbj|BAD44164.1| hypothetical protein [Arabidopsis thaliana] gi|51971088|dbj|BAD44236.1| hypothetical protein [Arabidopsis thaliana] gi|332193576|gb|AEE31697.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query510
TAIR|locus:2026135657 AT1G34320 [Arabidopsis thalian 0.994 0.771 0.625 2.3e-165
TAIR|locus:504956337649 AT5G08660 "AT5G08660" [Arabido 0.986 0.775 0.605 3.5e-155
TAIR|locus:505006158615 AT1G30755 [Arabidopsis thalian 0.915 0.759 0.440 1e-98
TAIR|locus:2086218531 AT3G23160 "AT3G23160" [Arabido 0.405 0.389 0.291 6.4e-33
TAIR|locus:2151451474 AT5G51670 [Arabidopsis thalian 0.264 0.284 0.328 9.9e-24
TAIR|locus:2184417599 AT5G04550 "AT5G04550" [Arabido 0.264 0.225 0.329 2.5e-09
TAIR|locus:2026135 AT1G34320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1609 (571.5 bits), Expect = 2.3e-165, P = 2.3e-165
 Identities = 328/524 (62%), Positives = 407/524 (77%)

Query:     1 MTNLNPNNGFSGVGT-KSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGV 59
             MTNLN + GFS   T K N++SIL+FEVANTIVKG+NLM S+S+ S+  LKEVVLP+EGV
Sbjct:   135 MTNLNLSGGFSSATTVKGNKISILSFEVANTIVKGANLMHSLSKDSITHLKEVVLPSEGV 194

Query:    60 QNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQK 119
             QNL+SKDMDELL+I AADKR++L+IF+GEVVRFGNR KDPQ+HNL R+F+++  E  PQK
Sbjct:   195 QNLISKDMDELLRIAAADKREELRIFSGEVVRFGNRCKDPQYHNLDRFFDRLGSEFTPQK 254

Query:   120 QLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKG--ESFAI 177
              LKQEAE +M Q+M+ V  TA+LY+EL  LDRFEQD Q K QEE+NP  +Q+G  ++ AI
Sbjct:   255 HLKQEAETIMHQMMSFVHFTADLYHELHALDRFEQDYQRKIQEEENPSTAQRGVGDTLAI 314

Query:   178 LRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSM 237
             LR ELKSQ+K V+ L+KKSLWSR LEEVMEKLVD+V FL LE+H+AFG  D   P     
Sbjct:   315 LRTELKSQKKHVRNLKKKSLWSRILEEVMEKLVDVVHFLHLEIHEAFGGADPDKPANDPP 374

Query:   238 SNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFH 297
              NH++LG AGLALHYANII QID+LV+RSS+MP STRDALYQ LPPSIKSALRS++QSF 
Sbjct:   375 INHKKLGSAGLALHYANIITQIDTLVSRSSTMPASTRDALYQGLPPSIKSALRSRIQSFQ 434

Query:   298 VKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIR 357
             VKEE TV QIK EMEKTLQWLVP+ATNT KAHHGFGWVGEWA+ GS+ N++PAG T ++R
Sbjct:   435 VKEELTVPQIKAEMEKTLQWLVPVATNTTKAHHGFGWVGEWASSGSEANQRPAGQT-ILR 493

Query:   358 LETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQKTNKHTK- 416
             ++TL+HADKEKTEAYILDL++WLH LV + R    G G++S +K P+ +  QKT + +  
Sbjct:   494 IDTLHHADKEKTEAYILDLVVWLHHLVTQVR-ATTGYGLRSPVKSPIRSPNQKTIQLSSG 552

Query:   417 -REPST-FPPLTSEEQELLQKVALRNRVPGISKSLDFD---KIRLKRYDRLSKSSGQSPQ 471
                PS   P LT+E+QE+L+ V+ R + PGISKS +F+   K RL ++ RLSKSS  SP 
Sbjct:   553 SHNPSMGLPLLTTEDQEMLRDVSKRRKTPGISKSQEFETVAKARLCKHHRLSKSSSHSPM 612

Query:   472 RGS-----KELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR 510
              G      K+  +T+R PS VPII F I++ KALDVIDRVD +R
Sbjct:   613 MGEMMKNKKDTFSTRR-PSSVPIIDFDIDRMKALDVIDRVDTIR 655




GO:0009507 "chloroplast" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:504956337 AT5G08660 "AT5G08660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006158 AT1G30755 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086218 AT3G23160 "AT3G23160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151451 AT5G51670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184417 AT5G04550 "AT5G04550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query510
pfam0500387 pfam05003, DUF668, Protein of unknown function (DU 1e-35
pfam1196157 pfam11961, DUF3475, Domain of unknown function (DU 2e-19
>gnl|CDD|218374 pfam05003, DUF668, Protein of unknown function (DUF668) Back     alignment and domain information
 Score =  127 bits (320), Expect = 1e-35
 Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 1/87 (1%)

Query: 242 RLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHV-KE 300
            LG AGLALHYAN+I+QI+ L +   S+P   RD LYQ LP +I++ALRSKL+ +    +
Sbjct: 1   TLGGAGLALHYANVIIQIEKLASVPHSVPLEARDDLYQMLPATIRAALRSKLKPYLKDYD 60

Query: 301 EFTVAQIKDEMEKTLQWLVPIATNTAK 327
           E    + KD M++ L+WL P+A NT +
Sbjct: 61  EGLATEWKDAMDRILEWLAPMAHNTIR 87


Uncharacterized plant protein. Length = 87

>gnl|CDD|192898 pfam11961, DUF3475, Domain of unknown function (DUF3475) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 510
PF0500389 DUF668: Protein of unknown function (DUF668); Inte 100.0
PF1196157 DUF3475: Domain of unknown function (DUF3475); Int 99.94
>PF05003 DUF668: Protein of unknown function (DUF668); InterPro: IPR007700 This is a family of uncharacterised plant proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=1.2e-44  Score=307.42  Aligned_cols=86  Identities=63%  Similarity=1.001  Sum_probs=85.1

Q ss_pred             CcchhhhhhhHHHHHHHHHHHhhcCCCCCCchHHHHhhcCchhHHHHHHhcccccccc---chhhHHHHHHHHHHHhhhh
Q 010457          242 RLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVK---EEFTVAQIKDEMEKTLQWL  318 (510)
Q Consensus       242 tLG~AgLALHYANiIi~Ie~lvs~p~~v~~~aRD~LY~mLP~sIRsaLRskLr~~~~~---de~la~ewk~~m~kiL~WL  318 (510)
                      |||+|||||||||||+|||+|+++|++||+|+||+||||||++||++||+|||++++.   |+.+++|||++|+|||+||
T Consensus         1 tLG~AgLALhYANvI~~ie~l~~~p~~v~~~aRD~LY~mLP~~ir~aLr~kL~~~~~~~~~d~~~a~~~~~~m~kiL~WL   80 (89)
T PF05003_consen    1 TLGGAGLALHYANVIIQIEKLVSRPSSVPPNARDDLYQMLPPSIRSALRSKLRSYWKKAIYDELLAAEWKDAMEKILEWL   80 (89)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHcCcccCCchHHHHHHhhCcHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999999999   9999999999999999999


Q ss_pred             hhhhhhhhh
Q 010457          319 VPIATNTAK  327 (510)
Q Consensus       319 aPmAhNtir  327 (510)
                      +||||||+|
T Consensus        81 ~P~A~nt~r   89 (89)
T PF05003_consen   81 APMAHNTIR   89 (89)
T ss_pred             HHHHHhccC
Confidence            999999997



>PF11961 DUF3475: Domain of unknown function (DUF3475); InterPro: IPR021864 This presumed domain is functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query510
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.4 bits (122), Expect = 5e-07
 Identities = 55/435 (12%), Positives = 105/435 (24%), Gaps = 160/435 (36%)

Query: 5   NPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVS 64
           + +       T     S+L               L              LP E     V 
Sbjct: 293 HHSMTL----TPDEVKSLLL------------KYLDCRPQD--------LPRE-----VL 323

Query: 65  KDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQE 124
                 L I A   RD L                  W N                +L   
Sbjct: 324 TTNPRRLSIIAESIRDGL-----------AT-----WDNWKHVN---------CDKLTTI 358

Query: 125 AELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKGESFAILRAELKS 184
            E  +  L            E +    F++                     ++       
Sbjct: 359 IESSLNVLEP---------AEYR--KMFDR--------------------LSVF------ 381

Query: 185 QRKQVKILRK--KSLWSRSLEEVMEKLVD-IVTFLLLEMHDAFGST---DDHFPFKGSMS 238
                 I       +W   ++  +  +V+ +  + L+E      +      +   K  + 
Sbjct: 382 -PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440

Query: 239 N----HQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQ 294
           N    H+ +    +  HY NI    DS       +PP      Y  +             
Sbjct: 441 NEYALHRSI----VD-HY-NIPKTFDS----DDLIPPYLDQYFYSHI------------- 477

Query: 295 SFHVKEEFTVAQIKDEMEKT---LQWLVPIATNTAK-AHHGFGW--VGEWANLGSDLN-- 346
             H+K      +            ++L        K  H    W   G   N    L   
Sbjct: 478 GHHLK-NIEHPERMTLFRMVFLDFRFL------EQKIRHDSTAWNASGSILNTLQQLKFY 530

Query: 347 RKPAGPTDVIRLETLYHADKEKT-EAYILDLLLWLHQL---VNKARFGVIGGGMKSAIKY 402
           +              Y  D +   E  +  +L +L ++   +  +++  +   ++ A+  
Sbjct: 531 KP-------------YICDNDPKYERLVNAILDFLPKIEENLICSKYTDL---LRIALMA 574

Query: 403 PVGTSIQKTNKHTKR 417
                 ++ +K  +R
Sbjct: 575 EDEAIFEEAHKQVQR 589


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00