Citrus Sinensis ID: 010596

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500------
MGLFRAEGVVYKPVQETDTASPPPPQPNQFYLTANVKAPRMAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISYAELEDSPLYVPLHPYDSEDLKEQEIKHIDSDLSPPEKVQQAIDCLPLSSEKQPFFHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKVFHDLLYKE
ccccccccEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccccccccccHHHHHHHHHccccccccHHHHHHHHHccccccccccccHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccEEEEccHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccccccccccccccccccccHHHHHHHHHccccEEccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHccHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcc
ccccccccEEEcccHccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHEccccccccccccccccccHHcccccEEEEEcccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccEEEEEEEcHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccccHHHHHHHcccccccHHHHHHHHHHcccEEEEcccccHHccccccEEcccEEccccccccEccccccHHHHHHHHcccccEEEEEEcccccHHHHHHcccEEEEcccccEccccEccccccccEEEEEEccHHHHHHHHHHHEccccccHHHHHccccccHHHHccccccccEEEEcHHHHcccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHcEEEEEccHHHHHHHHHHHHHHHHccccHHHEEEHHHHHcHHHHHHHHHHHHHcHHHHHHHHHcc
mglfraegvvykpvqetdtasppppqpnqfyltanvkaprmAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISyaeledsplyvplhpydsedlkEQEIKhidsdlsppekvqqaidclplssekqpffhrwtvldyskayssgditpRMVAERFIAAVressnppmkmsfFINYNEEDILKQATEStlrykkgepisvLDGVLIAVkdeidcspypttggtkwlhkvrpctgdacCVMRLRLCGAILVgktnmhelgagtsginphygvarnpydpskitggsssgSAAVVAAGLCPvalgvdgggsvrmpaalcgvvgfkptfgriplsgvlplnwtVGMVGILAATVEDALVVYAAingplpsqqptvslpkvsfpllksatsISAIKLAKYdawfndcsddIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKincsdqgwDARVALSVygsfssqeYIKAQKIRKPKVFHDLLYKE
mglfraegvvykpvqetdtasppppqPNQFYLTANVKAPRMAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISYAELEDSPLYVPLHPYDSEDLKEQEIKHIDSDLSPPEKVQQAIDCLPLSSEKQPFFHRWTVLDYSkayssgditpRMVAERFIAAVressnppmkMSFFINYNEEDILKQATEStlrykkgepiSVLDGVLIAVKDEIDCSPypttggtkwlhkvRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSsqeyikaqkirkpkvfhdllyke
MGLFRAEGVVYKPVQETDTASPPPPQPNQFYLTANVKAPRMAGFLVKVFVWLLESPIlgglllYILKRNNLIHKFISYAELEDSPLYVPLHPYDSEDLKEQEIKHIDSDLSPPEKVQQAIDCLPLSSEKQPFFHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITggsssgsaavvaagLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKVFHDLLYKE
*****************************FYLTANVKAPRMAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISYAELEDSPLYVPLHPY**************************IDCLPLSSEKQPFFHRWTVLDYSKAYSSGDITPRMVAERFIAAVR*******KMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVA*****************AAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLP****TVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKVFHDLL***
*************VQE**************YLTANVKAPRMAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISYAELEDSPLYVPLHPYDS****************************************WTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKVFHDLLYK*
MGLFRAEGVVYKPV********PPPQPNQFYLTANVKAPRMAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISYAELEDSPLYVPLHPYDSEDLKEQEIKHIDSDLSPPEKVQQAIDCLPLSSEKQPFFHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKI*********AVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKVFHDLLYKE
****RAEGVVYKPVQETDTASPPPPQPNQFYLTANVKAPRMAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISYAELEDSPLYVPLHPYDSEDLKEQEIKHIDSDLSPPEKVQQAIDCLPLSSEKQPFFHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSS********AGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKVFHDLLYK*
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGLFRAEGVVYKPVQETDTASPPPPQPNQFYLTANVKAPRMAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISYAELEDSPLYVPLHPYDSEDLKEQEIKHIDSDLSPPEKVQQAIDCLPLSSEKQPFFHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKVFHDLLYKE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query506 2.2.26 [Sep-21-2011]
Q7XJJ7 607 Fatty acid amide hydrolas yes no 0.934 0.779 0.413 1e-107
B2V855485 Glutamyl-tRNA(Gln) amidot yes no 0.675 0.705 0.306 8e-40
Q7QH64 492 Glutamyl-tRNA(Gln) amidot yes no 0.618 0.636 0.330 1e-39
Q17H91 494 Glutamyl-tRNA(Gln) amidot N/A no 0.478 0.489 0.388 5e-38
Q97EX8 478 Glutamyl-tRNA(Gln) amidot yes no 0.571 0.604 0.331 2e-37
Q84DC4 507 Mandelamide hydrolase OS= yes no 0.654 0.652 0.357 8e-37
A0Q2Q0 485 Glutamyl-tRNA(Gln) amidot yes no 0.583 0.608 0.344 3e-36
E2QUD0 526 Glutamyl-tRNA(Gln) amidot yes no 0.624 0.600 0.340 5e-36
Q2S4S2 514 Glutamyl-tRNA(Gln) amidot yes no 0.620 0.610 0.346 6e-36
B0WAE3 496 Glutamyl-tRNA(Gln) amidot N/A no 0.470 0.479 0.375 9e-36
>sp|Q7XJJ7|FAAH_ARATH Fatty acid amide hydrolase OS=Arabidopsis thaliana GN=FAAH PE=1 SV=1 Back     alignment and function desciption
 Score =  388 bits (996), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/488 (41%), Positives = 298/488 (61%), Gaps = 15/488 (3%)

Query: 31  YLTANVKAPRMAGFLVKVFVWLLESPILGGLLLYILKRNNLIHKFISYAELEDSPLYVPL 90
           Y    +KAP + G   K+FV LLE+P++G L++  LK++N + K      + + P++ P 
Sbjct: 20  YKAETMKAPHLTGLSFKLFVNLLEAPLIGSLIVDYLKKDNGMTKIFRNTVIPEEPMFRPE 79

Query: 91  HPYDSEDLKEQEIKHIDSDLSPPEKVQQAIDCLP-------LSSEKQPFFHRWTVLDYSK 143
            P       E ++  +  D SP ++++ A+ CLP       L ++    F  W + DY+ 
Sbjct: 80  FPSQE---PEHDVVIVGEDESPIDRLETALKCLPQYDPSRSLHADPVSSFRYWKIRDYAY 136

Query: 144 AYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISV 203
           AY S   TP  VA+R I+ + E         F I ++  +++KQA  ST R+++G PISV
Sbjct: 137 AYRSKLTTPLQVAKRIISIIEEFGYDKPPTPFLIRFDANEVIKQAEASTRRFEQGNPISV 196

Query: 204 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGA 263
           LDG+ + +KD+IDC P+PT GGT WLH+ R    D+  V +LR CGAIL+GK NMHELG 
Sbjct: 197 LDGIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELGM 256

Query: 264 GTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVV 323
           GT+G N +YG  RNP+DP + TGGSSSGSAA+VAAGLC  ALG DGGGSVR+P+ALCG+ 
Sbjct: 257 GTTGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALCGIT 316

Query: 324 GFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFP 383
           G K T+GR  ++G L    TV ++G LA+++EDA +VYAAI G   + +  +      FP
Sbjct: 317 GLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILGSSSADRYNLKPSPPCFP 376

Query: 384 LLKS---ATSISAIKLAKYDAWFNDC-SDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEV 439
            L S   + +I +++L KY  WFND  S DI   C   +  L   +G KVVE+ +P +E 
Sbjct: 377 KLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLSNNHGCKVVEIVVPELEE 436

Query: 440 MRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKV- 498
           MR AH ++IGS   +SL+ Y +    S   +D R + +++ SFS+ +YI AQ +R+  + 
Sbjct: 437 MRAAHVISIGSPTLSSLTPYCEAGKNSKLSYDTRTSFAIFRSFSASDYIAAQCLRRRLME 496

Query: 499 FHDLLYKE 506
           +H  ++K+
Sbjct: 497 YHLNIFKD 504
Degrades bioactive fatty acid amides to their corresponding acids, thereby serving to terminate the signaling functions of these molecules. Converts N-actylethanolamine (NAE) to ethanolamine. Can also use oleamide or 2-arachidonylglycerol as substrates, but not indole-3-acetamide, 1-naphtalene-acetamide, nicotinic acid amide or L-asparagine. Might be involved in abscisic acid signaling and plant defense through distinctly different mechanisms not involving the catalytic activity.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 9EC: 9
>sp|B2V855|GATA_SULSY Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|Q7QH64|GATA_ANOGA Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial OS=Anopheles gambiae GN=gatA PE=3 SV=3 Back     alignment and function description
>sp|Q17H91|GATA_AEDAE Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial OS=Aedes aegypti GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|Q97EX8|GATA2_CLOAB Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=gatA2 PE=3 SV=1 Back     alignment and function description
>sp|Q84DC4|MANHY_PSEPU Mandelamide hydrolase OS=Pseudomonas putida GN=mdlY PE=1 SV=1 Back     alignment and function description
>sp|A0Q2Q0|GATA_CLONN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium novyi (strain NT) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|E2QUD0|GATA_CANFA Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial OS=Canis familiaris GN=QRSL1 PE=3 SV=1 Back     alignment and function description
>sp|Q2S4S2|GATA_SALRD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber (strain DSM 13855 / M31) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|B0WAE3|GATA_CULQU Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial OS=Culex quinquefasciatus GN=gatA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query506
224081068 611 predicted protein [Populus trichocarpa] 0.988 0.818 0.705 0.0
225438343 610 PREDICTED: fatty acid amide hydrolase [V 0.988 0.819 0.716 0.0
356511201 608 PREDICTED: glutamyl-tRNA(Gln) amidotrans 0.986 0.820 0.689 0.0
356527536 609 PREDICTED: glutamyl-tRNA(Gln) amidotrans 0.986 0.819 0.695 0.0
357520143 609 Glutamyl-tRNA(Gln) amidotransferase subu 0.986 0.819 0.691 0.0
224093658578 predicted protein [Populus trichocarpa] 0.922 0.807 0.712 0.0
449515768 746 PREDICTED: fatty acid amide hydrolase-li 0.970 0.658 0.678 0.0
449457323 608 PREDICTED: fatty acid amide hydrolase-li 0.970 0.807 0.676 0.0
356518808 621 PREDICTED: glutamyl-tRNA(Gln) amidotrans 0.986 0.803 0.666 0.0
356507431 620 PREDICTED: glutamyl-tRNA(Gln) amidotrans 0.986 0.804 0.664 0.0
>gi|224081068|ref|XP_002306283.1| predicted protein [Populus trichocarpa] gi|222855732|gb|EEE93279.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/513 (70%), Positives = 431/513 (84%), Gaps = 13/513 (2%)

Query: 1   MGLFRAEGVVYKPVQETDTASPPPPQPNQFYLTANVKAPRMAGFLVKVFVWLLESPILGG 60
           MGLFRA+GVVYKPV+  +      P  ++FYL ANVKAPRMAGF VK+F W LES I G 
Sbjct: 1   MGLFRAKGVVYKPVENVNLG----PDSDEFYLQANVKAPRMAGFPVKIFAWFLESRIFGT 56

Query: 61  LLLYILKRNNLIHKFISYAELEDSPLYVPLHPYDSEDLKEQEIKHIDSDLSPPEKVQQAI 120
            LLYILKRNNLIHK ++ AEL++SP+YVP+HP+  E+L EQE+KHIDS LSP E+VQQAI
Sbjct: 57  FLLYILKRNNLIHKLVTNAELKESPVYVPMHPF--EELNEQEVKHIDSGLSPSEQVQQAI 114

Query: 121 DCLPLSSEK-----QPFFHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSF 175
           +CLPL SEK     +P F RWT++DYSKAYSSG+ITP MVAE+ + A+RESS+PPM M+F
Sbjct: 115 NCLPLPSEKIVNGLKPSFRRWTIMDYSKAYSSGEITPCMVAEQLVTAIRESSSPPMDMAF 174

Query: 176 FINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPC 235
           FINY+ EDIL+QA EST RY++GEPIS LDGV IA+KDEIDCSPYPTTGGTKWLHK R C
Sbjct: 175 FINYDAEDILRQAKESTRRYERGEPISALDGVPIAIKDEIDCSPYPTTGGTKWLHKFRSC 234

Query: 236 TGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAV 295
            GDACCVMRLR CGA+++GKTNMHELGAGTSGINPHYG  RNPY+P  I+GGSSSGSAAV
Sbjct: 235 KGDACCVMRLRSCGAVIIGKTNMHELGAGTSGINPHYGATRNPYNPGMISGGSSSGSAAV 294

Query: 296 VAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVE 355
           VAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGR+P SGVLPLNWTVGMVG+LA T+E
Sbjct: 295 VAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRVPHSGVLPLNWTVGMVGVLAGTIE 354

Query: 356 DALVVYAAINGPLPSQQPT-VSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDDIRVCC 414
           DA +VYAAINGPLPS + + + LPKV FPLL+S  S+S + LA+Y  WF+DC DDIR CC
Sbjct: 355 DAFIVYAAINGPLPSHETSAIPLPKVYFPLLQSTNSVSNVILARYGEWFSDCGDDIRTCC 414

Query: 415 SRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARV 474
           S+A+ +L E++GWK V+VTIP+IE MRLAHYLTIGSEC+ +LSSYL+K++ ++ GWD RV
Sbjct: 415 SQALHQLSEKFGWKTVDVTIPDIESMRLAHYLTIGSECTAALSSYLEKLDNAESGWDLRV 474

Query: 475 ALSVYGSFSSQEYIKAQKIRKPKV-FHDLLYKE 506
           AL VYGSFS +EYIKAQK+R  ++ FH  ++ +
Sbjct: 475 ALCVYGSFSGEEYIKAQKLRSRQMQFHRNIFTK 507

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225438343|ref|XP_002272907.1| PREDICTED: fatty acid amide hydrolase [Vitis vinifera] gi|296082617|emb|CBI21622.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356511201|ref|XP_003524317.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] Back     alignment and taxonomy information
>gi|356527536|ref|XP_003532365.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] Back     alignment and taxonomy information
>gi|357520143|ref|XP_003630360.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula] gi|355524382|gb|AET04836.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula] Back     alignment and taxonomy information
>gi|224093658|ref|XP_002309950.1| predicted protein [Populus trichocarpa] gi|222852853|gb|EEE90400.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449515768|ref|XP_004164920.1| PREDICTED: fatty acid amide hydrolase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449457323|ref|XP_004146398.1| PREDICTED: fatty acid amide hydrolase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356518808|ref|XP_003528069.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] Back     alignment and taxonomy information
>gi|356507431|ref|XP_003522470.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query506
TAIR|locus:2179371 607 FAAH "AT5G64440" [Arabidopsis 0.934 0.779 0.385 3.4e-92
DICTYBASE|DDB_G0275967 637 DDB_G0275967 "fatty acid amid 0.695 0.552 0.372 5.4e-61
UNIPROTKB|F1NQ46 481 LOC418339 "Uncharacterized pro 0.693 0.729 0.362 1.2e-56
ASPGD|ASPL0000052374 619 AN0828 [Emericella nidulans (t 0.699 0.571 0.325 3.8e-46
TIGR_CMR|CBU_1474 483 CBU_1474 "glutamyl-tRNA(Gln) a 0.626 0.656 0.300 1.7e-38
UNIPROTKB|F1NLA0 514 QRSL1 "Uncharacterized protein 0.624 0.614 0.330 2.4e-37
TAIR|locus:2102380 537 AT3G25660 [Arabidopsis thalian 0.624 0.588 0.316 1.3e-36
RGD|1359490 525 Qrsl1 "glutaminyl-tRNA synthas 0.624 0.601 0.304 7.4e-34
UNIPROTKB|Q9H0R6 528 QRSL1 "Glutamyl-tRNA(Gln) amid 0.367 0.352 0.316 2.7e-33
UNIPROTKB|Q84DC4 507 mdlY "Mandelamide hydrolase" [ 0.492 0.491 0.381 5.2e-33
TAIR|locus:2179371 FAAH "AT5G64440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 900 (321.9 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
 Identities = 188/488 (38%), Positives = 282/488 (57%)

Query:    31 YLTANVKAPRMAGFLVKVFVWLLESPIXXXXXXYILKRNNLIHKFISYAELEDSPLYVPL 90
             Y    +KAP + G   K+FV LLE+P+        LK++N + K      + + P++ P 
Sbjct:    20 YKAETMKAPHLTGLSFKLFVNLLEAPLIGSLIVDYLKKDNGMTKIFRNTVIPEEPMFRPE 79

Query:    91 HPYDSEDLKEQEIKHIDSDLSPPEKVQQAIDCLP-------LSSEKQPFFHRWTVLDYSK 143
              P  S++  E ++  +  D SP ++++ A+ CLP       L ++    F  W + DY+ 
Sbjct:    80 FP--SQE-PEHDVVIVGEDESPIDRLETALKCLPQYDPSRSLHADPVSSFRYWKIRDYAY 136

Query:   144 AYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISV 203
             AY S   TP  VA+R I+ + E         F I ++  +++KQA  ST R+++G PISV
Sbjct:   137 AYRSKLTTPLQVAKRIISIIEEFGYDKPPTPFLIRFDANEVIKQAEASTRRFEQGNPISV 196

Query:   204 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGA 263
             LDG+ + +KD+IDC P+PT GGT WLH+ R    D+  V +LR CGAIL+GK NMHELG 
Sbjct:   197 LDGIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELGM 256

Query:   264 GTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVV 323
             GT+G N +YG  RNP+DP + T              LC  ALG DGGGSVR+P+ALCG+ 
Sbjct:   257 GTTGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALCGIT 316

Query:   324 GFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFP 383
             G K T+GR  ++G L    TV ++G LA+++EDA +VYAAI G   + +  +      FP
Sbjct:   317 GLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILGSSSADRYNLKPSPPCFP 376

Query:   384 LLKS---ATSISAIKLAKYDAWFNDCSD-DIRVCCSRAVDKLCERYGWKVVEVTIPNIEV 439
              L S   + +I +++L KY  WFND S  DI   C   +  L   +G KVVE+ +P +E 
Sbjct:   377 KLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLSNNHGCKVVEIVVPELEE 436

Query:   440 MRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKV- 498
             MR AH ++IGS   +SL+ Y +    S   +D R + +++ SFS+ +YI AQ +R+  + 
Sbjct:   437 MRAAHVISIGSPTLSSLTPYCEAGKNSKLSYDTRTSFAIFRSFSASDYIAAQCLRRRLME 496

Query:   499 FHDLLYKE 506
             +H  ++K+
Sbjct:   497 YHLNIFKD 504
GO:0004040 "amidase activity" evidence=ISS
GO:0016884 "carbon-nitrogen ligase activity, with glutamine as amido-N-donor" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0047412 "N-(long-chain-acyl)ethanolamine deacylase activity" evidence=IMP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0070291 "N-acylethanolamine metabolic process" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
DICTYBASE|DDB_G0275967 DDB_G0275967 "fatty acid amid hydrolase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1NQ46 LOC418339 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ASPGD|ASPL0000052374 AN0828 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1474 CBU_1474 "glutamyl-tRNA(Gln) amidotransferase, A subunit" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|F1NLA0 QRSL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TAIR|locus:2102380 AT3G25660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1359490 Qrsl1 "glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H0R6 QRSL1 "Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q84DC4 mdlY "Mandelamide hydrolase" [Pseudomonas putida (taxid:303)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00050093
hypothetical protein (611 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pg.C_LG_VIII001519
glutamyl-tRNA(Gln) amidotransferase (EC-6.3.5.7) (506 aa)
• • • • 0.721
estExt_fgenesh4_pm.C_LG_X0145
glutamyl-tRNA(Gln) amidotransferase (529 aa)
• • • • 0.628
fgenesh4_pg.C_scaffold_21769000001
Predicted protein (281 aa)
• •     0.504

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query506
COG0154475 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransf 6e-83
pfam01425431 pfam01425, Amidase, Amidase 8e-72
PRK00012 459 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransf 2e-66
PRK07488 472 PRK07488, PRK07488, indole acetimide hydrolase; Va 9e-60
TIGR00132460 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) a 3e-59
PRK09201465 PRK09201, PRK09201, amidase; Provisional 3e-56
PRK06102452 PRK06102, PRK06102, hypothetical protein; Provisio 2e-55
TIGR02715452 TIGR02715, amido_AtzE, amidohydrolase, AtzE family 1e-54
PRK06169466 PRK06169, PRK06169, putative amidase; Provisional 6e-51
PRK07056454 PRK07056, PRK07056, amidase; Provisional 7e-50
PRK05962424 PRK05962, PRK05962, amidase; Validated 6e-49
PRK08186 600 PRK08186, PRK08186, allophanate hydrolase; Provisi 2e-45
PRK08310395 PRK08310, PRK08310, amidase; Provisional 3e-43
PRK12470462 PRK12470, PRK12470, amidase; Provisional 1e-42
PRK07042464 PRK07042, PRK07042, amidase; Provisional 2e-42
TIGR02713 561 TIGR02713, allophanate_hyd, allophanate hydrolase 3e-41
PRK06061 483 PRK06061, PRK06061, amidase; Provisional 4e-41
PRK08137 497 PRK08137, PRK08137, amidase; Provisional 9e-39
PRK07235 502 PRK07235, PRK07235, amidase; Provisional 3e-36
PRK07487469 PRK07487, PRK07487, amidase; Provisional 1e-34
PRK07486 484 PRK07486, PRK07486, amidase; Provisional 1e-33
PRK06170 490 PRK06170, PRK06170, amidase; Provisional 4e-33
PRK06707536 PRK06707, PRK06707, amidase; Provisional 4e-30
PRK07869468 PRK07869, PRK07869, amidase; Provisional 2e-29
PLN02722422 PLN02722, PLN02722, indole-3-acetamide amidohydrol 3e-29
PRK06828 491 PRK06828, PRK06828, amidase; Provisional 3e-28
PRK07139 439 PRK07139, PRK07139, amidase; Provisional 5e-26
PRK06529 482 PRK06529, PRK06529, amidase; Provisional 1e-19
PRK11910615 PRK11910, PRK11910, amidase; Provisional 2e-19
PRK06565 566 PRK06565, PRK06565, amidase; Validated 3e-17
>gnl|CDD|223232 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
 Score =  264 bits (677), Expect = 6e-83
 Identities = 120/316 (37%), Positives = 169/316 (53%), Gaps = 12/316 (3%)

Query: 135 RWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILK--QATEST 192
             T  + +    + +++   + E ++A + E+ NP +    F+  + E  L   +A  + 
Sbjct: 6   ELTAAELAALLRAKELSAVELVEAYLARI-EALNPDLN--AFVAVDPEAALALAEAAAAD 62

Query: 193 LRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAIL 252
            R   GEP+  L GV IAVKD ID +  PTT G+K L    P   DA  V RLR  GA++
Sbjct: 63  ARLAAGEPLGPLAGVPIAVKDNIDTAGLPTTAGSKALEDYVP-PYDATVVERLRAAGAVI 121

Query: 253 VGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGS 312
           +GKTNM E   G+S  N  +G  RNP++  ++ GGSS GSAA VAAGL P+ALG D GGS
Sbjct: 122 LGKTNMDEFAMGSSTENSAFGPTRNPWNLERVPGGSSGGSAAAVAAGLVPLALGSDTGGS 181

Query: 313 VRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQ 372
           +R+PAA CG+VG KPT+GR+   GV+PL  ++  +G LA TV DA ++   I GP P   
Sbjct: 182 IRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQIGPLARTVRDAALLLDVIAGPDPRDS 241

Query: 373 PTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDC--SDDIRVCCSRAVDKLCERYGWKVV 430
           P    P V   L      +  +++              D+R     AV  L E  G +VV
Sbjct: 242 PLPPPPPVPPALAG--KDLKGLRIGVPKELGGGGPLDPDVRAAFEAAVKAL-EAAGAEVV 298

Query: 431 EVTIPN-IEVMRLAHY 445
           EV++P   +   LA Y
Sbjct: 299 EVSLPLLSDDYALAAY 314

Length = 475
>gnl|CDD|216494 pfam01425, Amidase, Amidase Back     alignment and domain information
>gnl|CDD|234572 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>gnl|CDD|236030 PRK07488, PRK07488, indole acetimide hydrolase; Validated Back     alignment and domain information
>gnl|CDD|232842 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit Back     alignment and domain information
>gnl|CDD|236409 PRK09201, PRK09201, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235698 PRK06102, PRK06102, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|233982 TIGR02715, amido_AtzE, amidohydrolase, AtzE family Back     alignment and domain information
>gnl|CDD|180437 PRK06169, PRK06169, putative amidase; Provisional Back     alignment and domain information
>gnl|CDD|235921 PRK07056, PRK07056, amidase; Provisional Back     alignment and domain information
>gnl|CDD|168315 PRK05962, PRK05962, amidase; Validated Back     alignment and domain information
>gnl|CDD|236177 PRK08186, PRK08186, allophanate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|181375 PRK08310, PRK08310, amidase; Provisional Back     alignment and domain information
>gnl|CDD|171524 PRK12470, PRK12470, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235915 PRK07042, PRK07042, amidase; Provisional Back     alignment and domain information
>gnl|CDD|233981 TIGR02713, allophanate_hyd, allophanate hydrolase Back     alignment and domain information
>gnl|CDD|235686 PRK06061, PRK06061, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236161 PRK08137, PRK08137, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235979 PRK07235, PRK07235, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236029 PRK07487, PRK07487, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236028 PRK07486, PRK07486, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235723 PRK06170, PRK06170, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235855 PRK06707, PRK06707, amidase; Provisional Back     alignment and domain information
>gnl|CDD|181154 PRK07869, PRK07869, amidase; Provisional Back     alignment and domain information
>gnl|CDD|166363 PLN02722, PLN02722, indole-3-acetamide amidohydrolase Back     alignment and domain information
>gnl|CDD|180715 PRK06828, PRK06828, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235945 PRK07139, PRK07139, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180608 PRK06529, PRK06529, amidase; Provisional Back     alignment and domain information
>gnl|CDD|183377 PRK11910, PRK11910, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180626 PRK06565, PRK06565, amidase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 506
PRK07487469 amidase; Provisional 100.0
PRK06169466 putative amidase; Provisional 100.0
PRK09201465 amidase; Provisional 100.0
PRK06102452 hypothetical protein; Provisional 100.0
TIGR02715452 amido_AtzE amidohydrolase, AtzE family. Members of 100.0
COG0154475 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su 100.0
PRK07486 484 amidase; Provisional 100.0
PRK08137497 amidase; Provisional 100.0
PRK07042464 amidase; Provisional 100.0
PRK07056454 amidase; Provisional 100.0
PRK06170490 amidase; Provisional 100.0
TIGR00132460 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) 100.0
PRK00012459 gatA aspartyl/glutamyl-tRNA amidotransferase subun 100.0
PRK07488472 indole acetimide hydrolase; Validated 100.0
PRK06061 483 amidase; Provisional 100.0
PRK12470462 amidase; Provisional 100.0
PRK06828491 amidase; Provisional 100.0
PRK06529 482 amidase; Provisional 100.0
PRK05962424 amidase; Validated 100.0
PRK08186 600 allophanate hydrolase; Provisional 100.0
PF01425441 Amidase: Amidase; InterPro: IPR000120 Amidase sign 100.0
PRK07869468 amidase; Provisional 100.0
PRK07235502 amidase; Provisional 100.0
PRK11910615 amidase; Provisional 100.0
PRK06707536 amidase; Provisional 100.0
TIGR02713 561 allophanate_hyd allophanate hydrolase. Allophanate 100.0
PRK06565 566 amidase; Validated 100.0
PRK08310395 amidase; Provisional 100.0
PRK07139439 amidase; Provisional 100.0
PLN02722422 indole-3-acetamide amidohydrolase 100.0
KOG1211 506 consensus Amidases [Translation, ribosomal structu 100.0
KOG1212 560 consensus Amidases [Translation, ribosomal structu 100.0
>PRK07487 amidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.7e-82  Score=680.48  Aligned_cols=361  Identities=27%  Similarity=0.352  Sum_probs=317.3

Q ss_pred             ccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCCCceeEEEecCHHHHHHHHHHHhHHHhcCCCCCCccccEEEEe
Q 010596          133 FHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVK  212 (506)
Q Consensus       133 ~~~~si~~l~~~~~sg~~Tp~ev~~a~l~~i~~~~~~~~~~~a~~~~~~e~al~~A~~~d~r~~~g~~~gpL~GVPiaVK  212 (506)
                      +..+++.+++++|++|++||+||++++|+||++.+   +.+|+|++++.|+|+++|+++|+++++|+++||||||||+||
T Consensus         5 ~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~---~~lna~~~~~~e~al~~A~~~d~~~~~g~~~gpL~GvPi~vK   81 (469)
T PRK07487          5 LWRLSAAELAAAVRSRDVSAREAAEAALARLDAVN---PAINAVVDHRPEEALAQADAVDAARARGDDPGPLAGVPVTVK   81 (469)
T ss_pred             hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHC---CCccEEEEeCHHHHHHHHHHhHHHHhcCCCCCCcCCCEEEEe
Confidence            34569999999999999999999999999999886   579999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcCCCcccccccCCCCCCCHHHHHHHHHCCCeEEeecchhhhccccCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 010596          213 DEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGS  292 (506)
Q Consensus       213 D~~~v~G~~tt~Gs~~~~~~~~~~~da~~V~rLr~AGAIi~GKTnm~E~~~~~~g~n~~~G~t~NP~n~~~~~GGSSgGs  292 (506)
                      |+|+++|++||+||..+.++. +.+||++|++||+||||++||||||||+++.+|.|++||+|+||||++|+||||||||
T Consensus        82 D~~~v~G~~tt~Gs~~~~~~~-~~~da~vV~rLr~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~~GGSSgGs  160 (469)
T PRK07487         82 VNVDQAGFATTNGVRLQKDLI-APADSPVVDNLRKAGAVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPGGSSGGA  160 (469)
T ss_pred             cccccCCCccCcchHHhcCCC-CCCchHHHHHHHHCCCEEEEecChhhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHH
Confidence            999999999999999877765 4789999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCcccccccCCCcccccccccCcccccCCCCcccCCCCCC----CC-CccceeccCCCCHHHHHHHHHHHcCC
Q 010596          293 AAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLP----LN-WTVGMVGILAATVEDALVVYAAINGP  367 (506)
Q Consensus       293 AaaVAag~~p~alGtD~GGSIRiPAa~cGv~GlKPT~Grvs~~G~~~----~~-~s~~~~Gp~arsv~Dla~~~~~i~g~  367 (506)
                      |||||+|++|+|+|||||||||||||||||||||||+||||+.|+.+    +. +++|++|||||||+|+++++++|.|+
T Consensus       161 AaAVAaG~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~l~g~  240 (469)
T PRK07487        161 AAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAAMAAP  240 (469)
T ss_pred             HHHHHcCCCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999763    33 47899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccccccccCCCCCcEEEEeCCCC-CCCCHHHHHHHHHHHHHHHHhCCcEEEEe-cCCChHHHHHHHH
Q 010596          368 LPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWF-NDCSDDIRVCCSRAVDKLCERYGWKVVEV-TIPNIEVMRLAHY  445 (506)
Q Consensus       368 d~~d~~~~~~p~~~~~~~~~~~~~~~lrIG~~~~~~-~~~~p~v~~~~~~a~~~L~~~~G~~vv~v-~~p~~~~~~~~~~  445 (506)
                      |+.|..+...+     .   ....+++|||++.+++ ...+++++++++++++.|++ +||+|+++ ++|.+++....++
T Consensus       241 d~~d~~~~~~~-----~---~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~~~~~~~~~~~~~  311 (469)
T PRK07487        241 DPRDPWWVPAP-----L---EGPPRPKRVALCVRPDGLDVDPEVEAALRDAARRLED-AGWTVEEVDDTPPLREAAELQE  311 (469)
T ss_pred             CCCCCccCCCC-----c---cCCCCCcEEEEECCCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEecCCCCchHHHHHHHH
Confidence            87765332111     1   1235789999987654 35799999999999999986 89999998 8888877777777


Q ss_pred             HHHHHHHHHhhHHHHHhcCCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHhhhC
Q 010596          446 LTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRKPKV-FHDLLYKE  506 (506)
Q Consensus       446 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~s~~dy~~A~~~r~~~~-~~~~lf~k  506 (506)
                      .++..|....+..+++......+.+.++..+..+..++..+|.++++.|..++ .+.++|++
T Consensus       312 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~  373 (469)
T PRK07487        312 RLWLGDGYEALLAAAEAEGDPGALAALRGQRAKARPLDLAGYMNALARRATLTRQWQLFFED  373 (469)
T ss_pred             HHHHHHHHHHHHHHHHhhchhhhhHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            77788888877766543222335555555567778899999999999999999 88888864

>PRK06169 putative amidase; Provisional Back     alignment and domain information
>PRK09201 amidase; Provisional Back     alignment and domain information
>PRK06102 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02715 amido_AtzE amidohydrolase, AtzE family Back     alignment and domain information
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK07486 amidase; Provisional Back     alignment and domain information
>PRK08137 amidase; Provisional Back     alignment and domain information
>PRK07042 amidase; Provisional Back     alignment and domain information
>PRK07056 amidase; Provisional Back     alignment and domain information
>PRK06170 amidase; Provisional Back     alignment and domain information
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit Back     alignment and domain information
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>PRK07488 indole acetimide hydrolase; Validated Back     alignment and domain information
>PRK06061 amidase; Provisional Back     alignment and domain information
>PRK12470 amidase; Provisional Back     alignment and domain information
>PRK06828 amidase; Provisional Back     alignment and domain information
>PRK06529 amidase; Provisional Back     alignment and domain information
>PRK05962 amidase; Validated Back     alignment and domain information
>PRK08186 allophanate hydrolase; Provisional Back     alignment and domain information
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence Back     alignment and domain information
>PRK07869 amidase; Provisional Back     alignment and domain information
>PRK07235 amidase; Provisional Back     alignment and domain information
>PRK11910 amidase; Provisional Back     alignment and domain information
>PRK06707 amidase; Provisional Back     alignment and domain information
>TIGR02713 allophanate_hyd allophanate hydrolase Back     alignment and domain information
>PRK06565 amidase; Validated Back     alignment and domain information
>PRK08310 amidase; Provisional Back     alignment and domain information
>PRK07139 amidase; Provisional Back     alignment and domain information
>PLN02722 indole-3-acetamide amidohydrolase Back     alignment and domain information
>KOG1211 consensus Amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query506
2df4_A 485 Structure Of Trna-Dependent Amidotransferase Gatcab 4e-29
3h0l_A478 Structure Of Trna-Dependent Amidotransferase Gatcab 1e-27
3kfu_E 471 Crystal Structure Of The Transamidosome Length = 47 2e-27
2dc0_A434 Crystal Structure Of Amidase Length = 434 2e-26
3al0_A 475 Crystal Structure Of The Glutamine Transamidosome F 3e-26
2gi3_A 476 Crystal Structure Of Glutamyl-Trna(Gln) Amidotransf 2e-24
1m21_A 503 Crystal Structure Analysis Of The Peptide Amidase P 1e-21
3a1k_A 521 Crystal Structure Of Rhodococcus Sp. N771 Amidase L 1e-20
3a1i_A 521 Crystal Structure Of Rhodococcus Sp. N-771 Amidase 2e-20
1obk_A414 Crystal Structure Of The R158q Mutant Of Malonamida 2e-15
1ock_A412 The Crystal Structure Of Malonamidase E2 From Brady 2e-15
1obj_A414 Crystal Structure Of The T150a Mutant Of Malonamida 3e-15
1obi_A414 Crystal Structure Of The G130a Mutant Of Malonamida 3e-15
1obl_A414 Crystal Structure Of The S133a Mutant Of Malonamida 3e-15
1o9o_A414 Crystal Structure Of The S131a Mutant Of Malonamida 3e-15
4gyr_A 621 Granulibacter Bethesdensis Allophanate Hydrolase Ap 4e-15
1o9q_A414 Crystal Structure Of The S155c Mutant Of Malonamida 9e-15
1o9n_A414 Crystal Structure Of The K62a Mutant Of Malonamidas 1e-14
3a2p_A 493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 2e-14
3a2q_A 493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 5e-14
4hbp_A 550 Crystal Structure Of Faah In Complex With Inhibitor 3e-07
1mt5_A 537 Crystal Structure Of Fatty Acid Amide Hydrolase Len 3e-07
2wap_A 543 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 4e-07
2wj1_A 573 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 4e-07
4do3_A 571 Structure Of Faah With A Non-steroidal Anti-inflamm 5e-07
2vya_A 587 Crystal Structure Of Fatty Acid Amide Hydrolase Con 5e-07
3qk5_A 587 Crystal Structure Of Fatty Acid Amide Hydrolase Wit 6e-07
>pdb|2DF4|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Mn2+ Length = 485 Back     alignment and structure 
Iteration: 1

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 7/311 (2%)
Query: 150 ITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLI 209
           I P  V +    A+ E+ +P +K   F+  ++E+ +K+A E      K +    L G+ +
Sbjct: 20  IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPM 76
Query: 210 AVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGIN 269
            +KD I  +   TT  +K L    P   ++  + +L    A+L+GK NM E   G S   
Sbjct: 77  GIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHKENAVLIGKLNMDEFAMGGSTET 135
Query: 270 PHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTF 329
            ++    NP+D   +               L P++LG D GGS+R PAA CGVVG KPT+
Sbjct: 136 SYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTY 195
Query: 330 GRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSAT 389
           GR+   G++    ++  +G L   V+D  +V  AI+G   +   +  +  V F   +   
Sbjct: 196 GRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFT-SEIGK 254
Query: 390 SISAIKLAKYDAWFND-CSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTI 448
            I  +K+A    +  +  +DD++     AV+ L +  G  V EV++PN +    ++Y+  
Sbjct: 255 DIKGLKVALPKEYLGEGVADDVKEAVQNAVETL-KSLGAVVEEVSLPNTKFGIPSYYVIA 313
Query: 449 GSECSTSLSSY 459
            SE S++LS +
Sbjct: 314 SSEASSNLSRF 324
>pdb|3H0L|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus Length = 478 Back     alignment and structure
>pdb|3KFU|E Chain E, Crystal Structure Of The Transamidosome Length = 471 Back     alignment and structure
>pdb|2DC0|A Chain A, Crystal Structure Of Amidase Length = 434 Back     alignment and structure
>pdb|3AL0|A Chain A, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 475 Back     alignment and structure
>pdb|2GI3|A Chain A, Crystal Structure Of Glutamyl-Trna(Gln) Amidotransferase Subunit A (Tm1272) From Thermotoga Maritima At 1.80 A Resolution Length = 476 Back     alignment and structure
>pdb|1M21|A Chain A, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin Length = 503 Back     alignment and structure
>pdb|3A1K|A Chain A, Crystal Structure Of Rhodococcus Sp. N771 Amidase Length = 521 Back     alignment and structure
>pdb|3A1I|A Chain A, Crystal Structure Of Rhodococcus Sp. N-771 Amidase Complexed With Benzamide Length = 521 Back     alignment and structure
>pdb|1OBK|A Chain A, Crystal Structure Of The R158q Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1OCK|A Chain A, The Crystal Structure Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 412 Back     alignment and structure
>pdb|1OBJ|A Chain A, Crystal Structure Of The T150a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1OBI|A Chain A, Crystal Structure Of The G130a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1OBL|A Chain A, Crystal Structure Of The S133a Mutant Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1O9O|A Chain A, Crystal Structure Of The S131a Mutant Of Malonamidase E2 Complexed With Malonamate From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|4GYR|A Chain A, Granulibacter Bethesdensis Allophanate Hydrolase Apo Length = 621 Back     alignment and structure
>pdb|1O9Q|A Chain A, Crystal Structure Of The S155c Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|1O9N|A Chain A, Crystal Structure Of The K62a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Back     alignment and structure
>pdb|3A2P|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Length = 493 Back     alignment and structure
>pdb|3A2Q|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Complexed With Substrate Length = 493 Back     alignment and structure
>pdb|4HBP|A Chain A, Crystal Structure Of Faah In Complex With Inhibitor Length = 550 Back     alignment and structure
>pdb|1MT5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Length = 537 Back     alignment and structure
>pdb|2WAP|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With The Drug-Like Urea Inhibitor Pf-3845 Length = 543 Back     alignment and structure
>pdb|2WJ1|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With 7-Phenyl-1-(4-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One, An Alpha-Ketooxazole Length = 573 Back     alignment and structure
>pdb|4DO3|A Chain A, Structure Of Faah With A Non-steroidal Anti-inflammatory Drug Length = 571 Back     alignment and structure
>pdb|2VYA|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Conjugated With The Drug-Like Inhibitor Pf-750 Length = 587 Back     alignment and structure
>pdb|3QK5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small Molecule Inhibitor Length = 587 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query506
1o9p_A414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 1e-73
2dc0_A434 Probable amidase; structural genomics, NPPSFA, nat 2e-71
1m22_A 503 Peptide amidase, PAM; eleven-stranded beta sheet, 6e-69
3a2q_A 493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 8e-66
3ip4_A 485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 4e-62
3h0l_A 478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 2e-57
3a1k_A 521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 8e-57
3kfu_E 471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 1e-56
2gi3_A 476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 8e-55
3ppm_A 573 Fatty-acid amide hydrolase 1; protein-inhibitor co 4e-54
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Length = 414 Back     alignment and structure
 Score =  238 bits (609), Expect = 1e-73
 Identities = 83/363 (22%), Positives = 141/363 (38%), Gaps = 46/363 (12%)

Query: 137 TVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYK 196
           ++ D  +   +G+++P     +  AA+ E+    +    F+ +++               
Sbjct: 3   SLADLQRRIETGELSPNAAIAQSHAAI-EAREKEVHA--FVRHDKS-------------A 46

Query: 197 KGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKT 256
           + +    L G+ + +KD ID +  PT  G++     +P   DA  VM L+  GA ++GKT
Sbjct: 47  RAQASGPLRGIAVGIKDIIDTANMPTEMGSEIYRGWQP-RSDAPVVMMLKRAGATIIGKT 105

Query: 257 NMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMP 316
                 +             NP++     GG+SSGSAA V AG+ P+ALG   GGSV  P
Sbjct: 106 TTTAFASR------DPTATLNPHNTGHSPGGASSGSAAAVGAGMIPLALGTQTGGSVIRP 159

Query: 317 AALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVS 376
           AA CG    KP+F  +P  GV   +W +  VG+  A  ED      A+ G          
Sbjct: 160 AAYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTG---------- 209

Query: 377 LPKVSFPLLKSATSISAIKLAKYDAWFND-CSDDIRVCCSRAVDKLCERYGWKVVEVTIP 435
                           A ++      F              A+    ER G  V  + +P
Sbjct: 210 -----RSEFSGIVPAKAPRIGVVRQEFAGAVEPAAEQGLQAAIKAA-ERAGASVQAIDLP 263

Query: 436 N-IEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSF--SSQEYIKAQK 492
             +      H +    E   +L+    +           +  S+  +   + +EY +A++
Sbjct: 264 EAVHEAWRIHPIIQDFEAHRALAWEFSE---HHDEIAPMLRASLDATVGLTPKEYDEARR 320

Query: 493 IRK 495
           I +
Sbjct: 321 IGR 323
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Length = 434 Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Length = 503 Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Length = 493 Back     alignment and structure
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Length = 485 Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Length = 478 Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Length = 521 Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Length = 471 Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Length = 476 Back     alignment and structure
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Length = 573 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query506
3ip4_A485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
2dc0_A434 Probable amidase; structural genomics, NPPSFA, nat 100.0
1m22_A503 Peptide amidase, PAM; eleven-stranded beta sheet, 100.0
3h0l_A478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
3kfu_E471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 100.0
3a2q_A 493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 100.0
2gi3_A476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 100.0
1o9p_A414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 100.0
3ppm_A 573 Fatty-acid amide hydrolase 1; protein-inhibitor co 100.0
3a1k_A 521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 100.0
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Back     alignment and structure
Probab=100.00  E-value=4.9e-85  Score=704.08  Aligned_cols=367  Identities=29%  Similarity=0.436  Sum_probs=318.5

Q ss_pred             ccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCCCceeEEEecCHHHHHHHHHHHhHHH-hcCCCCCCccccEEEE
Q 010596          133 FHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRY-KKGEPISVLDGVLIAV  211 (506)
Q Consensus       133 ~~~~si~~l~~~~~sg~~Tp~ev~~a~l~~i~~~~~~~~~~~a~~~~~~e~al~~A~~~d~r~-~~g~~~gpL~GVPiaV  211 (506)
                      +.++|+.+++++|++|++||+||+++||+||++.+   +.+|||+++++|+|+++|+++|+++ ++|++ ||||||||+|
T Consensus         3 l~~~~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~---~~lna~~~~~~~~Al~~A~~~d~~~~~~g~~-gpL~GvPi~v   78 (485)
T 3ip4_A            3 IRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETD---PTIKSFLALDKENAIKKAQELDELQAKDQMD-GKLFGIPMGI   78 (485)
T ss_dssp             GGGCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH---HHHCCEEEECHHHHHHHHHHHHHHHHTTCCC-STTTTCEEEE
T ss_pred             cccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC---CCceEEEEECHHHHHHHHHHHHHHHHhcCCC-CCcCCCEEEE
Confidence            56789999999999999999999999999999986   6899999999999999999999999 89999 9999999999


Q ss_pred             ecCCCCCCCcCCCcccccccCCCCCCCHHHHHHHHHCCCeEEeecchhhhccccCCCCCCCCCCCCCCCCCCCCCCCCch
Q 010596          212 KDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSG  291 (506)
Q Consensus       212 KD~~~v~G~~tt~Gs~~~~~~~~~~~da~~V~rLr~AGAIi~GKTnm~E~~~~~~g~n~~~G~t~NP~n~~~~~GGSSgG  291 (506)
                      ||+|+++|++||+||..+.++.+ .+||++|+|||+|||||+||||||||+++.+|.|++||+|+||||++|+|||||||
T Consensus        79 KD~~~v~G~~tt~Gs~~~~~~~~-~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~t~n~~~G~t~NP~~~~~~pGGSSgG  157 (485)
T 3ip4_A           79 KDNIITNGLETTCASKMLEGFVP-IYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGG  157 (485)
T ss_dssp             ETTBCBTTBCCCTTSGGGTTCCC-SSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHH
T ss_pred             EcCcccCCCccCCCChhhcCCCC-CCCcHHHHHHHHCCCEEEEecCCcccccCCCCCCCCCCCcCCccccCcCCCCCccH
Confidence            99999999999999998877654 68999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHhCCCcccccccCCCcccccccccCcccccCCCCcccCCCCCCCCCccceeccCCCCHHHHHHHHHHHcCCCCCC
Q 010596          292 SAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQ  371 (506)
Q Consensus       292 sAaaVAag~~p~alGtD~GGSIRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~~~~Gp~arsv~Dla~~~~~i~g~d~~d  371 (506)
                      ||||||+|++|+|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|+|+|+.|
T Consensus       158 sAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~p~~~sld~~Gp~aRsv~D~a~~l~vl~g~d~~d  237 (485)
T 3ip4_A          158 SAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVND  237 (485)
T ss_dssp             HHHHHHTTSCSEEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSHHHHHHHHHHHBSCCTTC
T ss_pred             HHHHhhcCCCceeeeccCCcchhhhHHHhCCeeecCCCCcccCCCCCCcccccceeccccCCHHHHHHHHHHhcCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCCCCCccccccccCCCCCcEEEEeCCCCC-CCCHHHHHHHHHHHHHHHHhCCcEEEEecCCChHHHHHHHHHHHHH
Q 010596          372 QPTVSLPKVSFPLLKSATSISAIKLAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGS  450 (506)
Q Consensus       372 ~~~~~~p~~~~~~~~~~~~~~~lrIG~~~~~~~-~~~p~v~~~~~~a~~~L~~~~G~~vv~v~~p~~~~~~~~~~~~~~~  450 (506)
                      +.+...|.+.+... ...+++++|||++.+++. .++|+|+++++++++.|++ +||+|+++++|.+++....+..++.+
T Consensus       238 ~~~~~~~~~~~~~~-~~~~~~~lrigv~~~~~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~p~~~~~~~~~~~~~~~  315 (485)
T 3ip4_A          238 STSAPVDDVDFTSE-IGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKS-LGAVVEEVSLPNTKFGIPSYYVIASS  315 (485)
T ss_dssp             TTSCCCCCCCCSTT-TTCCCTTCEEEEEGGGGSTTSCHHHHHHHHHHHHHHHH-TTCEEEEECCTTGGGHHHHHHHHHHH
T ss_pred             ccccccCccchhhh-hccCccCcEEEEECCcccCCCCHHHHHHHHHHHHHHHH-CCCEEEEeCCCcHHHHHHHHHHHHHH
Confidence            65433222211110 123578999999987764 5799999999999999996 89999999999887777778888888


Q ss_pred             HHHHhhHHH------------------HHhcCCCCCCHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHH-HHHHhhhC
Q 010596          451 ECSTSLSSY------------------LQKINCSDQGWDARVALSVYG-----SFSSQEYIKAQKIRKPKV-FHDLLYKE  506 (506)
Q Consensus       451 e~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~g~-----~~s~~dy~~A~~~r~~~~-~~~~lf~k  506 (506)
                      |++.++..+                  +.......++++++..+..|.     .....+|.+|++.|++++ .+.++|++
T Consensus       316 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~  395 (485)
T 3ip4_A          316 EASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFEN  395 (485)
T ss_dssp             HHHHHTTTCSSSSSSCCCTTCCSHHHHHHHHHHHHSCHHHHHHHHHHHHHHSTTTTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhhhhhhccccccccccHHHHHHhhhhhhcCHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            988765321                  111011246677776665543     223346899999999998 88888864
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Back     alignment and structure
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 506
d2f2aa1 485 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransf 2e-65
d2gi3a1 475 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransf 1e-46
d1m22a_ 490 c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomon 1e-33
d1mt5a_ 537 c.117.1.1 (A:) Fatty acid amide hydrolase (oleamid 6e-28
d1ocka_412 c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium jap 9e-19
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Length = 485 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

 Score =  217 bits (553), Expect = 2e-65
 Identities = 100/329 (30%), Positives = 163/329 (49%), Gaps = 7/329 (2%)

Query: 133 FHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATEST 192
               +V +         I P  V +    A+ E ++P   +  F+  ++E+ +K+A E  
Sbjct: 3   IRYESVENLLTLIKDKKIKPSDVVKDIYDAI-EETDP--TIKSFLALDKENAIKKAQELD 59

Query: 193 LRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAIL 252
               K +    L G+ + +KD I  +   TT  +K L        ++  + +L    A+L
Sbjct: 60  ELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEG-FVPIYESTVMEKLHKENAVL 118

Query: 253 VGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGS 312
           +GK NM E   G S    ++    NP+D   + GGSS GSAA VAAGL P++LG D GGS
Sbjct: 119 IGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGS 178

Query: 313 VRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQ 372
           +R PAA CGVVG KPT+GR+   G++    ++  +G L   V+D  +V  AI+G   +  
Sbjct: 179 IRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDS 238

Query: 373 PTVSLPKVSFPLLKSATSISAIKLAKYDAWFND-CSDDIRVCCSRAVDKLCERYGWKVVE 431
            +  +  V F        I  +K+A    +  +  +DD++     AV+ L +  G  V E
Sbjct: 239 TSAPVDDVDFTSEIGK-DIKGLKVALPKEYLGEGVADDVKEAVQNAVETL-KSLGAVVEE 296

Query: 432 VTIPNIEVMRLAHYLTIGSECSTSLSSYL 460
           V++PN +    ++Y+   SE S++LS + 
Sbjct: 297 VSLPNTKFGIPSYYVIASSEASSNLSRFD 325
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Length = 475 Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Length = 490 Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 537 Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Length = 412 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query506
d2f2aa1485 Glutamyl-tRNA(Gln) amidotransferase subunit A {Sta 100.0
d1m22a_ 490 Peptide amidase Pam {Stenotrophomonas maltophilia 100.0
d1mt5a_ 537 Fatty acid amide hydrolase (oleamide hydrolase) {R 100.0
d2gi3a1475 Glutamyl-tRNA(Gln) amidotransferase subunit A {The 100.0
d1ocka_412 Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 100.0
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.3e-80  Score=664.12  Aligned_cols=369  Identities=29%  Similarity=0.428  Sum_probs=320.9

Q ss_pred             cccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHhhCCCCCceeEEEecCHHHHHHHHHHHhHHHhcCCCCCCccccEEEE
Q 010596          132 FFHRWTVLDYSKAYSSGDITPRMVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAV  211 (506)
Q Consensus       132 ~~~~~si~~l~~~~~sg~~Tp~ev~~a~l~~i~~~~~~~~~~~a~~~~~~e~al~~A~~~d~r~~~g~~~gpL~GVPiaV  211 (506)
                      .+++.|+.||+++|++|++||+||+++||+||++.+   +.+|||+++++|+|+++|+++|+++++|+.+||||||||+|
T Consensus         2 ~~~~~s~~~l~~~~~~~~~s~~e~~~~~l~ri~~~~---~~lna~~~~~~~~a~~~A~~~d~~~~~~~~~gpL~GiPi~v   78 (485)
T d2f2aa1           2 SIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETD---PTIKSFLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGI   78 (485)
T ss_dssp             CSTTCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH---HHHCCEEEECHHHHHHHHHHHHHHHHTTCCCSTTTTCEEEE
T ss_pred             CCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC---CCccEEEEeCHHHHHHHHHHHHHHHHCCCCCCCcCcCeEEE
Confidence            467889999999999999999999999999999986   68999999999999999999999999999999999999999


Q ss_pred             ecCCCCCCCcCCCcccccccCCCCCCCHHHHHHHHHCCCeEEeecchhhhccccCCCCCCCCCCCCCCCCCCCCCCCCch
Q 010596          212 KDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSG  291 (506)
Q Consensus       212 KD~~~v~G~~tt~Gs~~~~~~~~~~~da~~V~rLr~AGAIi~GKTnm~E~~~~~~g~n~~~G~t~NP~n~~~~~GGSSgG  291 (506)
                      ||+|+++|++||+||..+.+..+ .+|+++|++|+++|||++|||||+||+++.++.|++||+|+||||++|+|||||||
T Consensus        79 KD~~~v~g~~tt~Gs~~~~~~~~-~~d~~~v~~l~~~Gai~~gkt~~~e~~~~~~~~n~~~g~~~NP~~~~~~~GGSSgG  157 (485)
T d2f2aa1          79 KDNIITNGLETTCASKMLEGFVP-IYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGG  157 (485)
T ss_dssp             ETTBCBTTBCCCTTCGGGTTCCC-SSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHH
T ss_pred             EcccccCCCccCCcChhhccCCc-cccccccccccccccccccccchhhhcccccccCccccCcCCCCCcccccCCcccc
Confidence            99999999999999998877654 68999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHhCCCcccccccCCCcccccccccCcccccCCCCcccCCCCCCCCCccceeccCCCCHHHHHHHHHHHcCCCCCC
Q 010596          292 SAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQ  371 (506)
Q Consensus       292 sAaaVAag~~p~alGtD~GGSIRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~~~~Gp~arsv~Dla~~~~~i~g~d~~d  371 (506)
                      ||+|||+|++|+|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|+|+.|
T Consensus       158 saaavA~g~~~~alGtDt~GSiR~PAa~~Gl~G~kPt~G~is~~g~~~~~~~~d~~Gpmar~v~D~~~ll~~~~g~~~~d  237 (485)
T d2f2aa1         158 SAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVND  237 (485)
T ss_dssp             HHHHHHTTSCSCEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSHHHHHHHHHHHBSCBTTB
T ss_pred             chhhHHhccCceEEecCCCchhhhhHHHhCceeecCCCCCCCCCCCCCCcccCCeeccccCCHHHHHHHHhhcccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCCCCCccccccccCCCCCcEEEEeCCCCC-CCCHHHHHHHHHHHHHHHHhCCcEEEEecCCChHHHHHHHHHHHHH
Q 010596          372 QPTVSLPKVSFPLLKSATSISAIKLAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGS  450 (506)
Q Consensus       372 ~~~~~~p~~~~~~~~~~~~~~~lrIG~~~~~~~-~~~p~v~~~~~~a~~~L~~~~G~~vv~v~~p~~~~~~~~~~~~~~~  450 (506)
                      +.+...+...+... ...+++++|||++.+++. ..+++++++++++++.|++ +|++|+++++|.++.....+..+...
T Consensus       238 ~~~~~~~~~~~~~~-~~~~~~~lrig~~~~~~~~~~~~~i~~a~~~a~~~L~~-~G~~v~ev~lp~~~~~~~~~~~~~~~  315 (485)
T d2f2aa1         238 STSAPVDDVDFTSE-IGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKS-LGAVVEEVSLPNTKFGIPSYYVIASS  315 (485)
T ss_dssp             TTSCCCCCCCCSTT-TTCCCTTCEEEEEGGGGSTTSCHHHHHHHHHHHHHHHH-TTCEEEEECCTTGGGHHHHHHHHHHH
T ss_pred             cccCCCCccchhhh-hcCCccCCEEEEEcccccCcCCHHHHHHHHHHHHHHHH-CCCEEEEeCCCchhhhHHHHHHHHHH
Confidence            65443332222111 124578999999987654 5799999999999999996 89999999999887777777777778


Q ss_pred             HHHHhhHHHH------------------HhcCCCCCCHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHH-HHHHhhhC
Q 010596          451 ECSTSLSSYL------------------QKINCSDQGWDARVALSVY-----GSFSSQEYIKAQKIRKPKV-FHDLLYKE  506 (506)
Q Consensus       451 e~~~~~~~~~------------------~~~~~~~~~~~~~~~l~~g-----~~~s~~dy~~A~~~r~~~~-~~~~lf~k  506 (506)
                      |+...+..+.                  .......++++++..+..+     ..+...+|.++++.|..+. .+.++|++
T Consensus       316 e~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~f~~  395 (485)
T d2f2aa1         316 EASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFEN  395 (485)
T ss_dssp             HHHHHTTTCSSSSSSCCCSSCCSHHHHHHHHHHHHSCHHHHHHHHHHHHHHSTTTTTTTHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHhhhhhhccccccccCHHHHHHHhhhhhcCHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            8876654321                  1001123566666554433     4566678889999999888 88888864
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure