Citrus Sinensis ID: 010735
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 502 | 2.2.26 [Sep-21-2011] | |||||||
| Q56YU0 | 501 | Aldehyde dehydrogenase fa | yes | no | 0.992 | 0.994 | 0.728 | 0.0 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 0.966 | 0.901 | 0.560 | 1e-165 | |
| Q8S528 | 534 | Aldehyde dehydrogenase fa | no | no | 0.966 | 0.908 | 0.546 | 1e-159 | |
| P27463 | 509 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.941 | 0.556 | 1e-158 | |
| P00352 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.956 | 0.539 | 1e-156 | |
| P86886 | 500 | Retinal dehydrogenase 1 O | N/A | no | 0.954 | 0.958 | 0.545 | 1e-156 | |
| Q8MI17 | 496 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.965 | 0.554 | 1e-155 | |
| P51977 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.954 | 0.956 | 0.543 | 1e-155 | |
| P48644 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.956 | 0.543 | 1e-155 | |
| P24549 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.954 | 0.956 | 0.541 | 1e-155 |
| >sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/501 (72%), Positives = 425/501 (84%), Gaps = 3/501 (0%)
Query: 5 LSNGSCK--SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
+ NG C + K+PEIKFTKLFING+F+D+ SGKTFETIDPR GE IA IAEGDKEDVD
Sbjct: 1 MENGKCNGATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVD 60
Query: 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD 122
LAV AAR AFDHGPWPR +G ER ++ KFADLIEE+ E LA L+A+D GKL K D
Sbjct: 61 LAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYAD 120
Query: 123 IPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
IP A RY AGAADKIHGE LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF KV+
Sbjct: 121 IPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVA 180
Query: 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
PA+AAGCTM+VKPAEQT L AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DK
Sbjct: 181 PAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDK 240
Query: 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
VSFTGSTDVGR++MQAAA SNLK VSLELGGKSPLLIF+D D++ AAD+ALLG +NKGE
Sbjct: 241 VSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGE 300
Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361
ICVASSRV+VQEGIYD+ +KLVEKAK W VGDPFD RQGPQVDK+QF++ILSYIEHG
Sbjct: 301 ICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHG 360
Query: 362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421
K EGATLLTGGK IG KGY+I+PTIF +VTEDM I ++EIFGPVM+LMKFKTVEE IK A
Sbjct: 361 KNEGATLLTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCA 420
Query: 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLE 481
NNT+YGLAAGI+++D+++ NTVSRSI+AGIIW+NCYF FD DCPYGGYKMSG R+ G++
Sbjct: 421 NNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMD 480
Query: 482 SLHNYLQVKSVVTPIFNSPWL 502
+L NYLQ KSVV P+ NSPW+
Sbjct: 481 ALDNYLQTKSVVMPLHNSPWM 501
|
Involved in ferulic acid and sinapic acid biosynthesis by oxidation of conyferylaldehyde and sinapaldehyde, respectively. Can oxidize L-lactaldehyde. Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 272/485 (56%), Positives = 355/485 (73%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
++ T+L ING FVDS SGKTF T+DPRTGE IA +AEGD ED++ AVKAAR AFD GPW
Sbjct: 54 QVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPW 113
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ S ER ++L+FADL+E+H+E LA LE D GK + + +IP A RYYAG A
Sbjct: 114 PKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWA 173
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + Q +TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQ
Sbjct: 174 DKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL A Y L AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++
Sbjct: 234 TPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGL 293
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA SNLKPV+LELGGKSP ++F+D D++ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 294 AANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYD 353
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
EF +K +A VVGDPF + QGPQ+D KQF++++ YI+ G ATL GG IG
Sbjct: 354 EFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGD 413
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
KGY+I+PT+F+NV +DMLIA++EIFGPV +++KF V+E IK AN T+YGLAAG+ TK+L
Sbjct: 414 KGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNL 473
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497
+ AN VSR+++AG +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQ+K+VVT +
Sbjct: 474 DTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALN 533
Query: 498 NSPWL 502
W+
Sbjct: 534 KPAWI 538
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust.
Identities = 265/485 (54%), Positives = 350/485 (72%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
+++ T+L I G FVD+VSGKTF T+DPR GE IA+++EGD EDV+ AV AAR+AFD GPW
Sbjct: 50 KVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPW 109
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ + ER I+ +FADLIE+H + +A LE D GK + + ++P A RYYAG A
Sbjct: 110 PKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWA 169
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + TL EPIGV G IIPWNFP M K+ PALA G T+++K AEQ
Sbjct: 170 DKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQ 229
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL AL L AG+PDGV+N+V GFG TAGAAIASHMD+DKV+FTGSTDVG+ +++
Sbjct: 230 TPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILEL 289
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A+ SNLK V+LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 290 ASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYD 349
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
EF +K +A VGDPF + QGPQVD +QF++IL YI+HG GATL GG +G
Sbjct: 350 EFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGS 409
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
KGYYI+PT+F++V +DMLIA +EIFGPV ++KFK ++E I ANN+RYGLAAG+ T++L
Sbjct: 410 KGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNL 469
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497
+ A+ + R++R G +WINC+ D+ P+GGYKMSG GR+ G+ SL+NYLQVK+VVT +
Sbjct: 470 DTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTSLK 529
Query: 498 NSPWL 502
N WL
Sbjct: 530 NPAWL 534
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 559 bits (1440), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 349/480 (72%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+IK+TK+FIN E+ DSVSGK FE +P E I +AEGDK D+D AVKAAR+AF+ G P
Sbjct: 25 KIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSP 84
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADL+E LA +EA+D GKL S A + D+ T+RY AG
Sbjct: 85 WRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGW 144
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG + M +T EP+GV G IIPWNFP MF K++PAL G T++VKPAE
Sbjct: 145 ADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAE 204
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL ALY L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +
Sbjct: 205 QTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKE 264
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA +NLK V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IY
Sbjct: 265 AAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIY 324
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ +E+AK + +GDP P V+QGPQ+DK+QF +IL IE GK+EGA L GG P G
Sbjct: 325 DEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWG 384
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
KGY+I+PT+F+NVT+DM IAK EIFGPV +MKFKT++E IK ANNT YGLAA + TKD
Sbjct: 385 NKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKD 444
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
++ A T + +++AG +W+NCY AF + CP+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 445 IDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKI 504
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 259/480 (53%), Positives = 351/480 (73%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F +P T E + ++ EGDKEDVD AVKAARQAF G P
Sbjct: 17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +E+++ GKL+S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + + YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L GG P G
Sbjct: 317 DEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
KGY+++PT+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AG+ TKD
Sbjct: 377 NKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKD 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
++ A T+S +++AG +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 437 IDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P86886|AL1A1_MESAU Retinal dehydrogenase 1 OS=Mesocricetus auratus GN=ALDH1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/480 (54%), Positives = 351/480 (73%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F I+P T E I + EGDK D+D AVKAARQAF G P
Sbjct: 16 KIQYTKIFINNEWHDSVSGKKFPVINPATEEVICHVEEGDKADIDKAVKAARQAFQIGSP 75
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADL+E +LA LEA + GK+ + + + D+ G L+Y AG
Sbjct: 76 WRTMDASERGRLLYKLADLMERDRLLLATLEATNGGKVFASSYLFDLGGCIKALKYCAGW 135
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADK+HG+ + + YT REPIGV G IIPWNFP MF K+ PAL G T+IVKPAE
Sbjct: 136 ADKVHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPLLMFIWKIGPALGCGNTVIVKPAE 195
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL ALY A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST VG+ + +
Sbjct: 196 QTPLTALYMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTQVGKLIKE 255
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++TA + A G+ +++G+ CVA+SR++V+E IY
Sbjct: 256 AAGKSNLKRVTLELGGKSPCIVFADADLDTAVEFAHYGVFYHQGQCCVAASRLFVEESIY 315
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +V+G+P + + QGPQ+DK+Q D+IL IE GK+EGA L GG G
Sbjct: 316 DEFVRRSVERAKKYVLGNPLNSGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWG 375
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
KGY+++PT+F+NVT+DM IAK EIFGPV +MKFK++++ IK ANNT YGLAAG+ TKD
Sbjct: 376 NKGYFVQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTSYGLAAGVFTKD 435
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
L+ A TVS +++AG++W+NCY + CP+GG+KMSG GR+ G ++ Y ++K+V I
Sbjct: 436 LDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGIYEYTELKTVAIKI 495
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8MI17|AL1A1_RABIT Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 550 bits (1417), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/480 (55%), Positives = 349/480 (72%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F ++P T E I I EGDK DVD AVKAARQAF G P
Sbjct: 12 KIQYTKIFINNEWHDSVSGKKFPVLNPATEEQICLIEEGDKADVDKAVKAARQAFQIGSP 71
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +E+L+AGKL A + D+ G TLRY AG
Sbjct: 72 WRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGW 131
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP M K+ PAL+ G T+IVKPAE
Sbjct: 132 ADKIQGRTMPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAE 191
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 192 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 251
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 252 AAGKSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 311
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G
Sbjct: 312 DEFVRRSVERAKKYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGGPWG 371
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
KGY+I+PT+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI TKD
Sbjct: 372 NKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLSAGIFTKD 431
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
L+ A TVS +++AG +W+NCY + P+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 432 LDKAVTVSSALQAGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGLQQYTEVKTVTVKI 491
|
Can convert/oxidize retinaldehyde to retinoic acid. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 347/480 (72%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G P
Sbjct: 17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
KGY+I+PT+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
++ A TVS ++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 437 IDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Ovis aries (taxid: 9940) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P48644|AL1A1_BOVIN Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 549 bits (1415), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 347/480 (72%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G P
Sbjct: 17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
KGY+I+PT+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
++ A TVS ++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 437 IDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P24549|AL1A1_MOUSE Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 549 bits (1415), Expect = e-155, Method: Compositional matrix adjust.
Identities = 260/480 (54%), Positives = 351/480 (73%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I+ TK+FIN E+ +SVSGK F ++P T E I + EGDK DVD AVKAARQAF G P
Sbjct: 17 KIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K ADL+E +LA +EAL+ GK+ + A + D+ G L+Y AG
Sbjct: 77 WRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG+ + + YT REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +
Sbjct: 197 QTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +Y
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DEF K+ VE+AK +V+G+P P + QGPQ+DK+Q D+IL IE GK+EGA L GG G
Sbjct: 317 DEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWG 376
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
KG++++PT+F+NVT++M IAK EIFGPV +MKFK+V++ IK ANNT YGLAAG+ TKD
Sbjct: 377 NKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKD 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
L+ A TVS +++AG++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 437 LDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
In addition to the activity on acetaldehyde and related substrates, is also involved in the oxidation of aldehydes derived from biogenic amines such as epinephrine and norepinephrine, as well as the aldehydes generated via lipid peroxidation. Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 502 | ||||||
| 255546541 | 501 | aldehyde dehydrogenase, putative [Ricinu | 0.990 | 0.992 | 0.820 | 0.0 | |
| 356520525 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.994 | 0.996 | 0.797 | 0.0 | |
| 255546535 | 501 | aldehyde dehydrogenase, putative [Ricinu | 0.990 | 0.992 | 0.790 | 0.0 | |
| 356531249 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.994 | 0.996 | 0.789 | 0.0 | |
| 356513129 | 502 | PREDICTED: aldehyde dehydrogenase family | 0.994 | 0.994 | 0.764 | 0.0 | |
| 357518719 | 503 | Aldehyde dehydrogenase [Medicago truncat | 0.990 | 0.988 | 0.770 | 0.0 | |
| 356523743 | 501 | PREDICTED: aldehyde dehydrogenase family | 0.994 | 0.996 | 0.773 | 0.0 | |
| 388495142 | 497 | unknown [Lotus japonicus] | 0.964 | 0.973 | 0.791 | 0.0 | |
| 197312909 | 500 | alcohol dehydrogenase [Rheum australe] | 0.990 | 0.994 | 0.768 | 0.0 | |
| 357500461 | 502 | Aldehyde dehydrogenase [Medicago truncat | 0.990 | 0.990 | 0.794 | 0.0 |
| >gi|255546541|ref|XP_002514330.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546786|gb|EEF48284.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/497 (82%), Positives = 453/497 (91%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SNGS +S K+P IKFTKLFINGEFVDS SGKTFETIDPRTGEAIARIAEGDKED++LAV
Sbjct: 5 SNGSSESFIKIPTIKFTKLFINGEFVDSFSGKTFETIDPRTGEAIARIAEGDKEDIELAV 64
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KA+R+AFDHGPWPR SG+ R IM++FADLI+E+ E LA L+ +D GKL S K DIP
Sbjct: 65 KASREAFDHGPWPRLSGSARARIMMRFADLIDENKEELAALDTIDGGKLFSGGKTVDIPS 124
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP+ MFFMKV+PALA
Sbjct: 125 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPSLMFFMKVAPALA 184
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCT IVKPAEQTPL AL++AHLAKLAG+PDGVLNVV G+GPTAGAAIASHMDID VSFT
Sbjct: 185 AGCTTIVKPAEQTPLSALFYAHLAKLAGLPDGVLNVVTGYGPTAGAAIASHMDIDMVSFT 244
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GST+VGR+VMQAAATSNLK VSLELGGKSPLLIFDD D+NTA+D+AL GIL+NKGE+CVA
Sbjct: 245 GSTEVGRKVMQAAATSNLKQVSLELGGKSPLLIFDDADINTASDLALFGILYNKGEVCVA 304
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SSRVYVQEGIYDE KKLVEKAKAWVVGDPFDP V QGPQVDK+Q+++ILSYIEH K EG
Sbjct: 305 SSRVYVQEGIYDEIVKKLVEKAKAWVVGDPFDPKVHQGPQVDKQQYEKILSYIEHAKGEG 364
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425
ATLLTGGK + +KGYYIEPTIF ++ EDMLI K+EIFGPVM+LMKFKT+EEAIK AN+TR
Sbjct: 365 ATLLTGGKSLFEKGYYIEPTIFADLQEDMLIVKDEIFGPVMSLMKFKTIEEAIKRANDTR 424
Query: 426 YGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 485
YGLAAGI+TKDLN+ANTV+RSIRAG+IW+NCYFAFD DCPYGGYK SGFGRD GLE+LH
Sbjct: 425 YGLAAGIVTKDLNIANTVARSIRAGVIWVNCYFAFDQDCPYGGYKTSGFGRDFGLEALHK 484
Query: 486 YLQVKSVVTPIFNSPWL 502
YLQVKSVVTPI+NSPWL
Sbjct: 485 YLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520525|ref|XP_003528912.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/499 (79%), Positives = 447/499 (89%)
Query: 4 SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
+LSNG S FKMP IKFTKLFINGEFVDS+SGK FETIDPRTGE I RIAEG KED+D+
Sbjct: 3 ALSNGHDASFFKMPSIKFTKLFINGEFVDSLSGKEFETIDPRTGEVITRIAEGAKEDIDV 62
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
AVKAAR AFD+GPWPR GAER IM+K+ADLI+++ E +A L+A+DAGKL+ W K DI
Sbjct: 63 AVKAARDAFDYGPWPRMPGAERAKIMMKWADLIDQNIEEIAALDAIDAGKLYHWCKAVDI 122
Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
P AANT+RYYAGAADKIHGEVLK SR YTL EPIGVVGHIIPWNFP+TMF KVSP+
Sbjct: 123 PAAANTIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPS 182
Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
LAAGCTM++KPAEQTPL AL++AHLAKLAG+PDGVLNVVPGFG TAGAAI+SHMDIDKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQTAGAAISSHMDIDKVS 242
Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
FTGST+VGR+VM+AAA SNLKPVSLELGGKSP+++FDD DV+ AA +AL+GILFNKGEIC
Sbjct: 243 FTGSTEVGREVMRAAANSNLKPVSLELGGKSPVIVFDDADVDKAAGLALMGILFNKGEIC 302
Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363
VA SRV VQEGIYDEFEKKLVEKA AWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGK+
Sbjct: 303 VAGSRVLVQEGIYDEFEKKLVEKANAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKK 362
Query: 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN 423
EGATLLTGGK +G KGYYIEPTIF+NV EDMLI ++EIFGPVMALMKFKT+E+AIK ANN
Sbjct: 363 EGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANN 422
Query: 424 TRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 483
TRYGLA+GI+TK L+ ANTVSRSIRAGI+WINCYFAF D PYGGYKMSGFGRD G+E+L
Sbjct: 423 TRYGLASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGDDIPYGGYKMSGFGRDFGMEAL 482
Query: 484 HNYLQVKSVVTPIFNSPWL 502
H YLQVKSVVTPI+NSPWL
Sbjct: 483 HKYLQVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546535|ref|XP_002514327.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546783|gb|EEF48281.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/497 (79%), Positives = 446/497 (89%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SN S FK+P+IKFTKLFINGEFVDS+SGKTFET+DPR+GE I R+A+GDK DVDLAV
Sbjct: 5 SNERSDSFFKIPKIKFTKLFINGEFVDSISGKTFETVDPRSGEVITRVAQGDKGDVDLAV 64
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KAAR AFD+GPWPR SG R I+++FAD+IEEH E LA ++ +DAGKL + K DIP
Sbjct: 65 KAARHAFDNGPWPRMSGFARGRILMEFADIIEEHIEELAAIDTIDAGKLFTMGKAADIPM 124
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
A N LRYYAGAADKIHG+VLKMSR LQGYTL EP+GVVGHIIPWNFPT MFFMKV+PALA
Sbjct: 125 AINLLRYYAGAADKIHGQVLKMSRELQGYTLHEPVGVVGHIIPWNFPTNMFFMKVAPALA 184
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCTM+VKPAEQTPL ALY+AHLAK AG+PDGV+NV+ GFGPTAGAAIASHMDIDKVSFT
Sbjct: 185 AGCTMVVKPAEQTPLSALYYAHLAKQAGIPDGVINVITGFGPTAGAAIASHMDIDKVSFT 244
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GST+VGR++MQAAATSNLK VSLELGGKSPLLIFDD D++TA D+ALLGIL+NKGE+CVA
Sbjct: 245 GSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADIDTAVDLALLGILYNKGEVCVA 304
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SSRVYVQEGIYDE KKL +KAK WVVGDPFDP R GPQVDK+QFD+IL YIEHGK+EG
Sbjct: 305 SSRVYVQEGIYDELVKKLEKKAKDWVVGDPFDPISRLGPQVDKQQFDKILYYIEHGKKEG 364
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425
ATLLTGGKP G KGYY+ PTIFT+V EDM+IAK+EIFGPVM+LMKFKT++EAI+ ANNT+
Sbjct: 365 ATLLTGGKPSGNKGYYLHPTIFTDVKEDMMIAKDEIFGPVMSLMKFKTIDEAIERANNTK 424
Query: 426 YGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 485
YGLAAGI+TK+L+VANTVSRSIRAGIIWINCYF FD+DCP+GGYKMSGFGRD GL++LH
Sbjct: 425 YGLAAGIVTKNLDVANTVSRSIRAGIIWINCYFVFDNDCPFGGYKMSGFGRDLGLDALHK 484
Query: 486 YLQVKSVVTPIFNSPWL 502
YLQVKSVVTPI+NSPWL
Sbjct: 485 YLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531249|ref|XP_003534190.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/499 (78%), Positives = 446/499 (89%)
Query: 4 SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
+LSNG S FKMP IKFTKLFINGEFVDS+SG+ FET DPRTGE I RIAEG KEDVD+
Sbjct: 3 ALSNGHGSSFFKMPPIKFTKLFINGEFVDSLSGREFETRDPRTGEVITRIAEGAKEDVDV 62
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
AVKAAR AFD+GPWPR GAER IM+K+ADL++++ E +A L+A+DAGKL+ W K DI
Sbjct: 63 AVKAARAAFDYGPWPRMPGAERAKIMMKWADLVDQNIEEIAALDAIDAGKLYHWCKAVDI 122
Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
P AA+T+RYYAGAADKIHGEVLK SR YTL EPIGVVGHIIPWNFP+TMF KVSP+
Sbjct: 123 PAAASTIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPS 182
Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
LAAGCTM++KPAEQTPL AL++AHLAKLAG+PDGVLNVVPGFG TAG AI+ HMDIDKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQTAGVAISLHMDIDKVS 242
Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
FTGST+VGR+VM+AAA SNLKPVSLELGGKSP+++FDD DV+ AA++ALLGILFNKGEIC
Sbjct: 243 FTGSTEVGREVMRAAANSNLKPVSLELGGKSPVIVFDDADVDKAAELALLGILFNKGEIC 302
Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363
VA SRV VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQVDKKQF++ILSYIE GK+
Sbjct: 303 VAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEQGKK 362
Query: 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN 423
EGATLLTGGK +G KGYYIEPTIF+NV EDMLI ++EIFGPVMALMKFKT+E+AIK ANN
Sbjct: 363 EGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANN 422
Query: 424 TRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 483
TRYGLA+GI+TK L+ ANTVSRSIRAGI+WINCYFAF +D PYGGYKMSGFGRD G+E+L
Sbjct: 423 TRYGLASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGMEAL 482
Query: 484 HNYLQVKSVVTPIFNSPWL 502
H YLQVKSVVTPI+NSPWL
Sbjct: 483 HKYLQVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513129|ref|XP_003525266.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/501 (76%), Positives = 449/501 (89%), Gaps = 2/501 (0%)
Query: 4 SLSNG--SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDV 61
+ +NG + SL K+P + FTKLFI+G FV SVSGKTFETIDPRTG+ IARI+EGDKED+
Sbjct: 2 TFNNGDAAAASLNKVPTVNFTKLFIDGHFVHSVSGKTFETIDPRTGDVIARISEGDKEDI 61
Query: 62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121
D+AVKAAR AFD+GPWPR G+ER I+LK+A+LIEE+AE LA L+A+DAGKL+ +
Sbjct: 62 DIAVKAARHAFDNGPWPRLPGSERGRILLKWAELIEENAEELAALDAIDAGKLYHMCRNL 121
Query: 122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
++P AANTLRYYAGAADKIHGEVLKMSR YTL EP+GVVGHI PWNFP TMF++KV+
Sbjct: 122 EVPAAANTLRYYAGAADKIHGEVLKMSRDFHAYTLLEPLGVVGHITPWNFPNTMFYIKVA 181
Query: 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
P+LAAGCTM++KPAEQTPL AL+ AHLAKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DK
Sbjct: 182 PSLAAGCTMVLKPAEQTPLSALFNAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDK 241
Query: 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
VSFTGST GR++MQAAA SNLK VSLELGGKSPL+IFDD D++ AA++ALLGIL+NKGE
Sbjct: 242 VSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAAELALLGILYNKGE 301
Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361
+CVASSRV VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQVDK+QF+++LSYIEHG
Sbjct: 302 VCVASSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHG 361
Query: 362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421
K+EGATLLTGGK +G KGY+IEPTIF+N+ EDMLIA++EIFGPVMAL KFKT+EEAIKSA
Sbjct: 362 KKEGATLLTGGKTVGNKGYFIEPTIFSNIREDMLIAQDEIFGPVMALKKFKTIEEAIKSA 421
Query: 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLE 481
NNT+YGLAAGI+TK+L+ ANTVSRSIRAG IWINCYFAF D P+GGYKMSGFG+D GLE
Sbjct: 422 NNTKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLE 481
Query: 482 SLHNYLQVKSVVTPIFNSPWL 502
+LH YLQVKSVVTP++NSPWL
Sbjct: 482 ALHKYLQVKSVVTPLYNSPWL 502
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518719|ref|XP_003629648.1| Aldehyde dehydrogenase [Medicago truncatula] gi|357521043|ref|XP_003630810.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355523670|gb|AET04124.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355524832|gb|AET05286.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/497 (77%), Positives = 440/497 (88%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SNG SLFKMP IK+ KLFING+FVDSVSG TFETIDPRTG+ IARI+EG KED+++AV
Sbjct: 7 SNGDNSSLFKMPTIKYNKLFINGDFVDSVSGSTFETIDPRTGDVIARISEGAKEDIEIAV 66
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KAAR+AFD GPWPR SG ER IM+KFA+LI+E+ E LA L+A+DAGK++ K +IP
Sbjct: 67 KAAREAFDSGPWPRMSGVERAKIMMKFAELIDENIEELATLDAIDAGKVYFINKAFEIPS 126
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
AANTLRYYAGAADKIHGEVLK S YTL EPIGVVGHIIPWN PT +FF KVSP+LA
Sbjct: 127 AANTLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNAPTMVFFTKVSPSLA 186
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCTM++KPAEQTPL AL++AHLAKLAG+P+GVLNVVPGFGPTAGAAI+SHMDID VSFT
Sbjct: 187 AGCTMVLKPAEQTPLSALFYAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDVVSFT 246
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GS +VGR++MQAAA SNLK VSLELGGKSPL+IFDD D++ A ++ALLGIL NKGEICVA
Sbjct: 247 GSVEVGREIMQAAAKSNLKHVSLELGGKSPLIIFDDADIDKAVELALLGILANKGEICVA 306
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SRV+VQEGIYD+ EKKLVEKAKAWV+GDPFDP +QGPQ D+ QF++I+SYIEHGKREG
Sbjct: 307 CSRVFVQEGIYDQVEKKLVEKAKAWVIGDPFDPKTQQGPQADRNQFEKIISYIEHGKREG 366
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425
ATLLTGG+ +G +GYYIEPTIF+NV EDMLIA++EIFGPVMALMKFKT+EEAIKSANNTR
Sbjct: 367 ATLLTGGRRVGSQGYYIEPTIFSNVKEDMLIAQDEIFGPVMALMKFKTIEEAIKSANNTR 426
Query: 426 YGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 485
YGLAAGI+TK+L++ANTVSRSIRAGIIWIN Y A SD P+GGYKMSGFGRD GLE+LH
Sbjct: 427 YGLAAGIVTKNLDIANTVSRSIRAGIIWINSYLAVGSDIPFGGYKMSGFGRDQGLEALHK 486
Query: 486 YLQVKSVVTPIFNSPWL 502
YLQVKS+VTPI+NSPWL
Sbjct: 487 YLQVKSIVTPIYNSPWL 503
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523743|ref|XP_003530494.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/499 (77%), Positives = 450/499 (90%)
Query: 4 SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
SL+NG SL K+P IKFTKLFING+FVDS+SGKTFETIDPRTG+ IARI+EGDKED+D+
Sbjct: 3 SLTNGDAGSLNKVPTIKFTKLFINGDFVDSLSGKTFETIDPRTGDVIARISEGDKEDIDI 62
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
AVKAAR AFD+GPWPR G+ER I+LK+A++IEE+AE LA L+A+DAGKL+ + ++
Sbjct: 63 AVKAARHAFDNGPWPRLPGSERARILLKWAEIIEENAEELAALDAIDAGKLYHMCRNVEV 122
Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
P AANTLRYYAGAADKIHGEVLKMSR YTL EP+GVVGHI PWNFP TMF++KV+P+
Sbjct: 123 PAAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPS 182
Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
LAAGCTM++KPAEQTPL AL+ AHLAKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFSAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVS 242
Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
FTGST GR +MQAAA SNLK VSLELGGKSPL+IFDD D++ A ++ALLGIL+NKGE+C
Sbjct: 243 FTGSTQTGRVIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKATELALLGILYNKGEVC 302
Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363
VASSRV+VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQVDK+QF+++LSYIEHGK+
Sbjct: 303 VASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKK 362
Query: 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN 423
EGATLLTGGK +G KGY+IEPTIF+N+ EDMLIA++EIFGPVMAL KFKT EEAIKSANN
Sbjct: 363 EGATLLTGGKTVGNKGYFIEPTIFSNIREDMLIAQDEIFGPVMALKKFKTTEEAIKSANN 422
Query: 424 TRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 483
T+YGLAAGI+TK+L+ ANTVSRSIRAG IWINCYFAF D P+GGYKMSGFG+D GLE+L
Sbjct: 423 TKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEAL 482
Query: 484 HNYLQVKSVVTPIFNSPWL 502
H YLQVKSVVTP++NSPWL
Sbjct: 483 HKYLQVKSVVTPLYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388495142|gb|AFK35637.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/484 (79%), Positives = 434/484 (89%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
+KFTKLFING+FVDSVSG+TF TIDPRTG+ IA I+EG KED+D+AVKAARQAFD GPWP
Sbjct: 14 VKFTKLFINGDFVDSVSGRTFVTIDPRTGDVIASISEGTKEDIDIAVKAARQAFDSGPWP 73
Query: 79 RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
R GAER IM+K ADLI+E+ E LA L+A+DAGKL+ K DIPGAA TLRY+AGAAD
Sbjct: 74 RLPGAERAKIMMKLADLIDENTEELAALDAIDAGKLYHMCKAMDIPGAAKTLRYFAGAAD 133
Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
KIHGEVLK+SR L YTL EP+GVVGHIIPWNFP + FF KVSPALAAGCTM++KPAEQT
Sbjct: 134 KIHGEVLKVSRELHAYTLMEPVGVVGHIIPWNFPASFFFTKVSPALAAGCTMVLKPAEQT 193
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL+ AHLAKLAG+PDGVLNVVPGFG TAGAA++SHMDID VSFTGST GR+VM+AA
Sbjct: 194 PLSALFCAHLAKLAGIPDGVLNVVPGFGSTAGAAVSSHMDIDAVSFTGSTQTGREVMKAA 253
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A+SNLK VSLELGGKSPL+IF+D D++ AA++AL GIL NKGE+CVASSRV+VQEGIYDE
Sbjct: 254 ASSNLKRVSLELGGKSPLIIFNDADIDKAAELALYGILLNKGEVCVASSRVFVQEGIYDE 313
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378
FEKKLVEKAKAWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGKREGATLLTGGK +G K
Sbjct: 314 FEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKSVGNK 373
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
GYYIEPTIF+NV EDMLI ++EIFGPVMAL KFKTVEEAIKSANNTRYGLAAGIMTK+L+
Sbjct: 374 GYYIEPTIFSNVKEDMLIVQDEIFGPVMALKKFKTVEEAIKSANNTRYGLAAGIMTKNLD 433
Query: 439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 498
+ANTVSRSIRAG +WINCYFA D+D P+GGYK SGFG+D GLE++H YLQV SVVTPI+N
Sbjct: 434 IANTVSRSIRAGSVWINCYFAIDNDIPFGGYKASGFGKDYGLEAIHKYLQVNSVVTPIYN 493
Query: 499 SPWL 502
SPWL
Sbjct: 494 SPWL 497
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197312909|gb|ACH63235.1| alcohol dehydrogenase [Rheum australe] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/497 (76%), Positives = 439/497 (88%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SNG + F++PEIKFTKLFINGEFVDSVSGKTFET DPR GE IA +AEGDKEDVDLAV
Sbjct: 4 SNGKTEIKFQLPEIKFTKLFINGEFVDSVSGKTFETRDPRNGEVIAEVAEGDKEDVDLAV 63
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KAAR+AFDHGPWPR SG +R IM+K ADLIE+H E LA ++++DAGKL K+ DIPG
Sbjct: 64 KAAREAFDHGPWPRMSGYQRGRIMMKLADLIEQHLEELAAIDSMDAGKLFHIGKIIDIPG 123
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
AA+TLRYYAGAADKIHGE LKMSR QGYTLREP GVVGHIIPWNFPTTMFF KV+PALA
Sbjct: 124 AAHTLRYYAGAADKIHGETLKMSREFQGYTLREPAGVVGHIIPWNFPTTMFFAKVAPALA 183
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCTM+VKPAEQTPL ALY+AHLA LAG+P+GVLNVV GFGPTAGAA+ SHMD+DKVSFT
Sbjct: 184 AGCTMVVKPAEQTPLSALYYAHLANLAGIPEGVLNVVSGFGPTAGAALTSHMDVDKVSFT 243
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GS +VGR VMQAAATSNLK VSLELGGKSPL+IFDD DV+ AA++AL+GILFNKGE+CVA
Sbjct: 244 GSPEVGRLVMQAAATSNLKQVSLELGGKSPLIIFDDADVDKAAELALVGILFNKGEVCVA 303
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SSRV+VQ GIYD +KLVE AK W VGDPFDP+V+QGPQVDK QFDRILSYIEHGKREG
Sbjct: 304 SSRVFVQGGIYDAVVEKLVEMAKNWPVGDPFDPSVQQGPQVDKVQFDRILSYIEHGKREG 363
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425
ATLLTGG P+G KGYYI+PTIF +V ++M+IAK+EIFGPV++LMKFKT+EE I AN TR
Sbjct: 364 ATLLTGGNPLGDKGYYIQPTIFADVMDNMMIAKDEIFGPVLSLMKFKTIEEGIARANATR 423
Query: 426 YGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 485
YGLAAGI+TK L++ANTV+RS++AG +WINCYFAFD+D +GGYKMSGFG+D G+E+L+
Sbjct: 424 YGLAAGIVTKSLDIANTVARSVKAGTVWINCYFAFDNDAAFGGYKMSGFGKDNGMEALYK 483
Query: 486 YLQVKSVVTPIFNSPWL 502
Y QVK+VVTPI+NSPWL
Sbjct: 484 YTQVKTVVTPIYNSPWL 500
|
Source: Rheum australe Species: Rheum australe Genus: Rheum Family: Polygonaceae Order: Caryophyllales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357500461|ref|XP_003620519.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355495534|gb|AES76737.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/497 (79%), Positives = 445/497 (89%)
Query: 6 SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
SNG ++P IKFTKLFINGEFVDS+SGK FETIDPR+GE IA+IAEG KED+D+AV
Sbjct: 6 SNGKTNLSLEIPTIKFTKLFINGEFVDSLSGKEFETIDPRSGEVIAKIAEGTKEDIDVAV 65
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
KAAR AFD GPWPR G R IMLK+ADLI+++ E +A L+ +DAGKL+++ K DIPG
Sbjct: 66 KAARVAFDDGPWPRMPGFVRAKIMLKWADLIDQNIEEIAALDTIDAGKLYTFCKAVDIPG 125
Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
AN +RYYAGAADKIHG+VLK +R L YTL EPIGVVGHIIPWNFP+TMF KV+PALA
Sbjct: 126 VANIIRYYAGAADKIHGKVLKPARELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVAPALA 185
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
AGCTM++KPAEQTPL AL++AHLAK AG+PDGVLNVVPGFG TAGAAI+SHMDIDKVSFT
Sbjct: 186 AGCTMVLKPAEQTPLSALFYAHLAKEAGIPDGVLNVVPGFGATAGAAISSHMDIDKVSFT 245
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
GST+VGR++M +AA SNLKPVSLELGGKSPLLIFDD DVN AA++ALLGILFNKGEICVA
Sbjct: 246 GSTEVGREIMVSAARSNLKPVSLELGGKSPLLIFDDADVNKAAELALLGILFNKGEICVA 305
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
SRV+VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGK +G
Sbjct: 306 GSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKNDG 365
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425
ATLLTGGK IG KGYYIEPTIF+NV EDM IA++EIFGPVMALMKFKT+EEAIKSANNT+
Sbjct: 366 ATLLTGGKKIGDKGYYIEPTIFSNVKEDMRIAQDEIFGPVMALMKFKTIEEAIKSANNTK 425
Query: 426 YGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 485
YGLAAGI+TK+L++ANTVSRSIRAGIIWINCYFAF +D PYGGYKMSGFGRD GLESLH
Sbjct: 426 YGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFGNDIPYGGYKMSGFGRDFGLESLHK 485
Query: 486 YLQVKSVVTPIFNSPWL 502
YLQVKSVVTPI+NSPWL
Sbjct: 486 YLQVKSVVTPIYNSPWL 502
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 502 | ||||||
| TAIR|locus:505006369 | 501 | ALDH2C4 "AT3G24503" [Arabidops | 0.992 | 0.994 | 0.690 | 5.6e-187 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.966 | 0.901 | 0.525 | 1.2e-138 | |
| UNIPROTKB|P27463 | 509 | ALDH1A1 "Retinal dehydrogenase | 0.954 | 0.941 | 0.525 | 1.2e-134 | |
| MGI|MGI:1353450 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.954 | 0.956 | 0.516 | 1.8e-133 | |
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 0.966 | 0.908 | 0.513 | 1.8e-133 | |
| UNIPROTKB|P00352 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.954 | 0.956 | 0.512 | 7.9e-133 | |
| RGD|2087 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.954 | 0.956 | 0.512 | 1e-132 | |
| UNIPROTKB|P48644 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.954 | 0.956 | 0.512 | 2.4e-131 | |
| UNIPROTKB|J9NS92 | 501 | ALDH1A1 "Uncharacterized prote | 0.954 | 0.956 | 0.519 | 3.9e-131 | |
| UNIPROTKB|E2RMX7 | 496 | ALDH1A1 "Uncharacterized prote | 0.946 | 0.957 | 0.518 | 1e-130 |
| TAIR|locus:505006369 ALDH2C4 "AT3G24503" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1813 (643.3 bits), Expect = 5.6e-187, P = 5.6e-187
Identities = 346/501 (69%), Positives = 402/501 (80%)
Query: 5 LSNGSCK--SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
+ NG C + K+PEIKFTKLFING+F+D+ SGKTFETIDPR GE IA IAEGDKEDVD
Sbjct: 1 MENGKCNGATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVD 60
Query: 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGD 122
LAV AAR AFDHGPWPR +G ER ++ KFAD GKL K D
Sbjct: 61 LAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYAD 120
Query: 123 IPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
IP A RY AGAADKIHGE LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF KV+
Sbjct: 121 IPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVA 180
Query: 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
PA+AAGCTM+VKPAEQT L AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DK
Sbjct: 181 PAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDK 240
Query: 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
VSFTGSTDVGR++MQAAA SNLK VSLELGGKSPLLIF+D D++ AAD+ALLG +NKGE
Sbjct: 241 VSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGE 300
Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361
ICVASSRV+VQEGIYD+ +KLVEKAK W VGDPFD RQGPQVDK+QF++ILSYIEHG
Sbjct: 301 ICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHG 360
Query: 362 KREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421
K EGATLLT +PTIF +VTEDM I ++EIFGPVM+LMKFKTVEE IK A
Sbjct: 361 KNEGATLLTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCA 420
Query: 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLE 481
NNT+YGLAAGI+++D+++ NTVSRSI+AGIIW+NCYF FD DCPYGGYKMSG R+ G++
Sbjct: 421 NNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMD 480
Query: 482 SLHNYLQVKSVVTPIFNSPWL 502
+L NYLQ KSVV P+ NSPW+
Sbjct: 481 ALDNYLQTKSVVMPLHNSPWM 501
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1357 (482.7 bits), Expect = 1.2e-138, P = 1.2e-138
Identities = 255/485 (52%), Positives = 334/485 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
++ T+L ING FVDS SGKTF T+DPRTGE IA +AEGD ED++ AVKAAR AFD GPW
Sbjct: 54 QVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPW 113
Query: 78 PRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ S ER ++L+FAD GK + + +IP A RYYAG A
Sbjct: 114 PKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWA 173
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + Q +TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQ
Sbjct: 174 DKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL A Y L AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++
Sbjct: 234 TPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGL 293
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA SNLKPV+LELGGKSP ++F+D D++ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 294 AANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYD 353
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXX 377
EF +K +A VVGDPF + QGPQ+D KQF++++ YI+ G ATL
Sbjct: 354 EFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGD 413
Query: 378 XXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
+PT+F+NV +DMLIA++EIFGPV +++KF V+E IK AN T+YGLAAG+ TK+L
Sbjct: 414 KGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNL 473
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497
+ AN VSR+++AG +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQ+K+VVT +
Sbjct: 474 DTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALN 533
Query: 498 NSPWL 502
W+
Sbjct: 534 KPAWI 538
|
|
| UNIPROTKB|P27463 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 252/480 (52%), Positives = 330/480 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+IK+TK+FIN E+ DSVSGK FE +P E I +AEGDK D+D AVKAAR+AF+ G P
Sbjct: 25 KIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSP 84
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GKL S A + D+ T+RY AG
Sbjct: 85 WRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGW 144
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG + M +T EP+GV G IIPWNFP MF K++PAL G T++VKPAE
Sbjct: 145 ADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAE 204
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL ALY L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +
Sbjct: 205 QTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKE 264
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA +NLK V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IY
Sbjct: 265 AAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIY 324
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ +E+AK + +GDP P V+QGPQ+DK+QF +IL IE GK+EGA L
Sbjct: 325 DEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWG 384
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+PT+F+NVT+DM IAK EIFGPV +MKFKT++E IK ANNT YGLAA + TKD
Sbjct: 385 NKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKD 444
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
++ A T + +++AG +W+NCY AF + CP+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 445 IDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKI 504
|
|
| MGI|MGI:1353450 Aldh1a1 "aldehyde dehydrogenase family 1, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
Identities = 248/480 (51%), Positives = 332/480 (69%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I+ TK+FIN E+ +SVSGK F ++P T E I + EGDK DVD AVKAARQAF G P
Sbjct: 17 KIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GK+ + A + D+ G L+Y AG
Sbjct: 77 WRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG+ + + YT REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +
Sbjct: 197 QTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +Y
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF K+ VE+AK +V+G+P P + QGPQ+DK+Q D+IL IE GK+EGA L
Sbjct: 317 DEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+PT+F+NVT++M IAK EIFGPV +MKFK+V++ IK ANNT YGLAAG+ TKD
Sbjct: 377 NKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKD 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
L+ A TVS +++AG++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 437 LDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
|
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
Identities = 249/485 (51%), Positives = 330/485 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
+++ T+L I G FVD+VSGKTF T+DPR GE IA+++EGD EDV+ AV AAR+AFD GPW
Sbjct: 50 KVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPW 109
Query: 78 PRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ + ER I+ +FAD GK + + ++P A RYYAG A
Sbjct: 110 PKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWA 169
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + TL EPIGV G IIPWNFP M K+ PALA G T+++K AEQ
Sbjct: 170 DKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQ 229
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL AL L AG+PDGV+N+V GFG TAGAAIASHMD+DKV+FTGSTDVG+ +++
Sbjct: 230 TPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILEL 289
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A+ SNLK V+LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 290 ASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYD 349
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXX 377
EF +K +A VGDPF + QGPQVD +QF++IL YI+HG GATL
Sbjct: 350 EFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGS 409
Query: 378 XXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
+PT+F++V +DMLIA +EIFGPV ++KFK ++E I ANN+RYGLAAG+ T++L
Sbjct: 410 KGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNL 469
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497
+ A+ + R++R G +WINC+ D+ P+GGYKMSG GR+ G+ SL+NYLQVK+VVT +
Sbjct: 470 DTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTSLK 529
Query: 498 NSPWL 502
N WL
Sbjct: 530 NPAWL 534
|
|
| UNIPROTKB|P00352 ALDH1A1 "Retinal dehydrogenase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
Identities = 246/480 (51%), Positives = 331/480 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I++TK+FIN E+ DSVSGK F +P T E + ++ EGDKEDVD AVKAARQAF G P
Sbjct: 17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GKL+S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + + YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ VE+AK +++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L
Sbjct: 317 DEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+PT+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AG+ TKD
Sbjct: 377 NKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKD 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
++ A T+S +++AG +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 437 IDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
|
| RGD|2087 Aldh1a1 "aldehyde dehydrogenase 1 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1301 (463.0 bits), Expect = 1.0e-132, P = 1.0e-132
Identities = 246/480 (51%), Positives = 332/480 (69%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I+ TK+FIN E+ DSVSGK F ++P T E I + EGDK DVD AVKAARQAF G P
Sbjct: 17 KIQHTKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GK+ + A + D+ G+ L+Y AG
Sbjct: 77 WRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG+ + + +T REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +
Sbjct: 197 QTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +Y
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF +K VE+AK +V+G+P + QGPQ+DK+Q D+IL IE GK+EGA L
Sbjct: 317 DEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+PT+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAG+ TKD
Sbjct: 377 NKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKD 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
L+ A TVS +++AG++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 437 LDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
|
| UNIPROTKB|P48644 ALDH1A1 "Retinal dehydrogenase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 246/480 (51%), Positives = 327/480 (68%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G P
Sbjct: 17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GKL S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+PT+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
++ A TVS ++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 437 IDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
|
| UNIPROTKB|J9NS92 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
Identities = 250/481 (51%), Positives = 330/481 (68%)
Query: 18 EIK-FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
+IK F+ +FIN E+ +SVSGK F +P T E I + EGDKED+D AVKAARQAF G
Sbjct: 16 KIKLFSLIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGS 75
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
PW + +ER ++ K AD GKL S + D+ G TLRY AG
Sbjct: 76 PWRTMNASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAG 135
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
ADKIHG + + GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPA
Sbjct: 136 WADKIHGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPA 195
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
EQTPL AL+ A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ +
Sbjct: 196 EQTPLTALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIK 255
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+AA SNLK V+LELGGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E I
Sbjct: 256 EAAGKSNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESI 315
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
YDEF ++ VE+AK +V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPW 375
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
+PT+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAGI TK
Sbjct: 376 GNKGFFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTK 435
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495
D++ A TVS +++AG +W+NCY CP+GG+KMSG GR+ G L Y +VK V
Sbjct: 436 DIDKAITVSSALQAGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMK 495
Query: 496 I 496
I
Sbjct: 496 I 496
|
|
| UNIPROTKB|E2RMX7 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 247/476 (51%), Positives = 327/476 (68%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRF 80
+++FIN E+ +SVSGK F +P T E I + EGDKED+D AVKAARQAF G PW
Sbjct: 16 SQIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGSPWRTM 75
Query: 81 SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
+ +ER ++ K AD GKL S + D+ G TLRY AG ADKI
Sbjct: 76 NASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKI 135
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
HG + + GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPAEQTPL
Sbjct: 136 HGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPL 195
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
AL+ A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA
Sbjct: 196 TALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGK 255
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
SNLK V+LELGGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E IYDEF
Sbjct: 256 SNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFV 315
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXX 380
++ VE+AK +V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L
Sbjct: 316 RRSVERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGF 375
Query: 381 XXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
+PT+F+NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAGI TKD++ A
Sbjct: 376 FIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKA 435
Query: 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
TVS +++AG +W+NCY CP+GG+KMSG GR+ G L Y +VK V I
Sbjct: 436 ITVSSALQAGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMKI 491
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P51647 | AL1A1_RAT | 1, ., 2, ., 1, ., 3, 6 | 0.5354 | 0.9541 | 0.9560 | yes | no |
| P42041 | ALDH_ALTAL | 1, ., 2, ., 1, ., 3 | 0.5329 | 0.9362 | 0.9456 | N/A | no |
| Q25417 | ALDH2_LEITA | 1, ., 2, ., 1, ., 3 | 0.5074 | 0.9302 | 0.9377 | N/A | no |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5415 | 0.9302 | 0.9396 | yes | no |
| P40108 | ALDH_DAVTA | 1, ., 2, ., 1, ., 3 | 0.5350 | 0.9342 | 0.9455 | N/A | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.4872 | 0.9342 | 0.9474 | yes | no |
| Q27640 | ALDH_ENCBU | 1, ., 2, ., 1, ., 3 | 0.5278 | 0.9521 | 0.9617 | N/A | no |
| P00352 | AL1A1_HUMAN | 1, ., 2, ., 1, ., 3, 6 | 0.5395 | 0.9541 | 0.9560 | yes | no |
| P15437 | AL1A1_HORSE | 1, ., 2, ., 1, ., 3, 6 | 0.5375 | 0.9541 | 0.958 | yes | no |
| Q56YU0 | AL2C4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7285 | 0.9920 | 0.9940 | yes | no |
| P48644 | AL1A1_BOVIN | 1, ., 2, ., 1, ., 3, 6 | 0.5437 | 0.9541 | 0.9560 | yes | no |
| Q28399 | ALDH1_ELEED | 1, ., 2, ., 1, ., 3 | 0.5333 | 0.9541 | 0.9560 | N/A | no |
| P51977 | AL1A1_SHEEP | 1, ., 2, ., 1, ., 3, 6 | 0.5437 | 0.9541 | 0.9560 | N/A | no |
| P81178 | ALDH2_MESAU | 1, ., 2, ., 1, ., 3 | 0.5300 | 0.9601 | 0.964 | N/A | no |
| P46367 | ALDH4_YEAST | 1, ., 2, ., 1, ., 3 | 0.4819 | 0.9342 | 0.9036 | yes | no |
| Q29490 | ALDH1_MACPR | 1, ., 2, ., 1, ., 3 | 0.5375 | 0.9541 | 0.9560 | N/A | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5289 | 0.9541 | 0.9637 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5234 | 0.9322 | 0.9304 | yes | no |
| Q8HYE4 | AL1A1_MACFA | 1, ., 2, ., 1, ., 3, 6 | 0.5333 | 0.9541 | 0.9560 | N/A | no |
| O74187 | ALDH_AGABI | 1, ., 2, ., 1, ., 3 | 0.5010 | 0.9382 | 0.942 | N/A | no |
| P24549 | AL1A1_MOUSE | 1, ., 2, ., 1, ., 3, 6 | 0.5416 | 0.9541 | 0.9560 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.5217 | 0.9601 | 0.9251 | yes | no |
| Q8MI17 | AL1A1_RABIT | 1, ., 2, ., 1, ., 3, 6 | 0.5541 | 0.9541 | 0.9657 | yes | no |
| P86886 | AL1A1_MESAU | 1, ., 2, ., 1, ., 3, 6 | 0.5458 | 0.9541 | 0.958 | N/A | no |
| P27463 | AL1A1_CHICK | 1, ., 2, ., 1, ., 3, 6 | 0.5562 | 0.9541 | 0.9410 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pm.C_LG_XVIII000233 | coniferyl-aldehyde dehydrogenase (EC-1.2.1.68) (497 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.8531.4.1 | hypothetical protein (134 aa) | • | 0.899 | ||||||||
| gw1.22067.3.1 | annotation not avaliable (155 aa) | • | 0.899 | ||||||||
| Ptr4CL3 | SubName- Full=4-coumarate-CoA ligase; (541 aa) | • | 0.899 | ||||||||
| Ptr4CL4 | SubName- Full=Putative uncharacterized protein; (570 aa) | • | 0.899 | ||||||||
| f5h | SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa) | • | 0.899 | ||||||||
| SAD | SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa) | • | 0.899 | ||||||||
| ACLL14 | acyl-coa ligase (EC-6.2.1.12) (545 aa) | • | 0.899 | ||||||||
| eugene3.00071182 | SubName- Full=Ferulate 5-hydroxylase; (515 aa) | • | 0.899 | ||||||||
| Ptr4CL8 | 4-coumarate-coa ligase (544 aa) | • | 0.899 | ||||||||
| ACLL12 | 4-coumarate-coa ligase (544 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 502 | |||
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 0.0 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 0.0 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 0.0 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 0.0 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 0.0 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 0.0 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 0.0 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 0.0 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-180 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-179 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-178 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-178 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-177 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-172 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-172 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-171 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-171 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-169 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-166 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-164 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-162 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-158 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-158 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-154 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-153 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-150 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-149 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-147 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-144 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-142 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-139 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-139 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-139 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-138 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-137 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-136 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-134 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-134 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-127 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-125 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-122 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-120 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-119 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-117 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-116 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-115 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-114 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 1e-114 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-114 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-112 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-111 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-109 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-108 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-108 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-107 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-105 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-103 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-101 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-101 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-98 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 3e-97 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 1e-93 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-79 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 4e-79 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 4e-78 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-76 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 3e-76 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-75 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 6e-73 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-69 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-69 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 4e-67 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-65 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 3e-63 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 3e-63 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 7e-63 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 1e-62 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 2e-62 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 3e-60 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 2e-59 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 4e-59 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 6e-58 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 9e-57 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 3e-56 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 3e-50 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-49 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 4e-48 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-45 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 5e-44 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 8e-44 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-40 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-37 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 3e-36 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 2e-33 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 1e-29 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 4e-26 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 1e-25 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 4e-25 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 4e-22 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 9e-19 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 1e-10 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 1e-09 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 2e-08 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 2e-07 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 1e-06 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 4e-05 | |
| PRK13805 | 862 | PRK13805, PRK13805, bifunctional acetaldehyde-CoA/ | 7e-04 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 0.002 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 987 bits (2553), Expect = 0.0
Identities = 413/500 (82%), Positives = 451/500 (90%)
Query: 3 GSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
GS N S K+PEIKFTKLFINGEFVD+ SGKTFET DPRTGE IARIAEGDKEDVD
Sbjct: 2 GSNGNCGGASGVKVPEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVD 61
Query: 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD 122
LAVKAAR+AFDHGPWPR SG ER IM+KFADLIEEH E LA L+ +DAGKL + K D
Sbjct: 62 LAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVD 121
Query: 123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182
IP AA LRYYAGAADKIHGE LKMSR LQGYTL+EPIGVVGHIIPWNFP+TMFFMKV+P
Sbjct: 122 IPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAP 181
Query: 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 242
ALAAGCTM+VKPAEQTPL AL++AHLAKLAGVPDGV+NVV GFGPTAGAAIASHMD+DKV
Sbjct: 182 ALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKV 241
Query: 243 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEI 302
SFTGST+VGR++MQAAATSNLK VSLELGGKSPLLIFDD DV+ A D+ALLGI +NKGEI
Sbjct: 242 SFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEI 301
Query: 303 CVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK 362
CVASSRVYVQEGIYDEF KKLVEKAK WVVGDPFDP RQGPQVDK+QF++ILSYIEHGK
Sbjct: 302 CVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGK 361
Query: 363 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSAN 422
REGATLLTGGKP G KGYYIEPTIFT+VTEDM IA++EIFGPVM+LMKFKTVEEAIK AN
Sbjct: 362 REGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKAN 421
Query: 423 NTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 482
NT+YGLAAGI+TKDL+VANTVSRSIRAG IW+NCYFAFD DCP+GGYKMSGFGRD G+++
Sbjct: 422 NTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDA 481
Query: 483 LHNYLQVKSVVTPIFNSPWL 502
L YLQVKSVVTP++NSPWL
Sbjct: 482 LDKYLQVKSVVTPLYNSPWL 501
|
Length = 501 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 788 bits (2038), Expect = 0.0
Identities = 301/476 (63%), Positives = 373/476 (78%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
+K TKLFING+FVD+ SGKTF TIDPR GE IA +AEGD EDVD AVKAAR+AFD GPWP
Sbjct: 1 VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60
Query: 79 RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
R +G ER I+L+FADL+E+HA+ LA LE D GK + A+ ++P AA RYYAG AD
Sbjct: 61 RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120
Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
KIHG L YTL EPIGVVG IIPWNFP MF KV PALA G T+++KPAEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL A LA AG+PDGVLN+V GFGPTAGAAIASHMD+DKV+FTGST+VG+ +MQ A
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A SNLKPV+LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E IYDE
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378
F +K +A VVGDPF V QGPQVDK+QF++ILSYIEHGK EGATL+TGG IG K
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
GYYI+PTIF++V +DM IA++EIFGPV +++KFKTV+E IK ANN++YGLAAG+ +K+++
Sbjct: 361 GYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNID 420
Query: 439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
ANT+SR+++AG +W+NCY FD+ P+GGYKMSG GR+ G+ +L+NYLQVK+VV
Sbjct: 421 TANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 769 bits (1989), Expect = 0.0
Identities = 283/472 (59%), Positives = 351/472 (74%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T LFIN EFVDSVSGKTF TI+P T E I ++AE D+EDVD AVKAAR AF+ G W +
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER ++ K ADLIE + LA LE+LD GK + GD+ + LRYYAG ADKI
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
G+ + + YT REPIGV G IIPWNFP M K++PALAAG T+++KPAEQTPL
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
ALY A L K AG P GV+N+VPGFGPTAGAAI+SHMD+DK++FTGST VGR +M+AAA S
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
NLK V+LELGGKSP ++FDD D++ A + A GI FN+G+ C A SR++VQE IYDEF +
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 381
K +A+ VVGDPFDP QGPQV K QFD+ILSYIE GK+EGATLLTGG+ G KGY+
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYF 363
Query: 382 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441
I+PT+FT+V +DM IAK EIFGPV+ ++KFKT +E I+ AN+T YGLAAG+ TKD+N A
Sbjct: 364 IQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKAL 423
Query: 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
VSR+++AG +W+N Y FD+ P+GG+K SGFGR+ G E L Y QVK+V
Sbjct: 424 RVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 721 bits (1864), Expect = 0.0
Identities = 278/478 (58%), Positives = 342/478 (71%), Gaps = 1/478 (0%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
PEIK+TK+FIN E+ DSVSGKTF TI+P TGE I + EGDK DVD AVKAAR AF G
Sbjct: 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
PW +ER ++ K ADLIE LA LE LD GK S + + D+PGA LRYYAG
Sbjct: 62 PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
ADKIHG+ + M YT EP+GV G IIPWNFP M K++PALA G T+++KPA
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
EQTPL ALY A L K AG P GV+NVVPG+GPTAGAAI+SH DIDKV+FTGST+VG+ +
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
QAA SNLK V+LELGGKSP ++F D D++ A + A + FN G+ C A SR +VQE I
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YDEF K+ VE+AK VVG+PFDP QGPQ+D++QF +IL IE GK+EGA L GGK
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
G KGY+I+PT+F++VT+DM IAK EIFGPV + KFKT++E I+ ANNT YGLAA + TK
Sbjct: 362 GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTK 421
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
D++ A T S ++RAG +W+NCY P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 422 DIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 686 bits (1771), Expect = 0.0
Identities = 284/489 (58%), Positives = 363/489 (74%), Gaps = 8/489 (1%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
++ +T+L ING+FVD+ SGKTF T+DPRTGE IA +AEGD EDV+ AV AAR+AFD GPW
Sbjct: 54 QVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPW 113
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
P+ + ER I+L+FADL+E+H + LA LE D GK + + ++P A RYYAG A
Sbjct: 114 PKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWA 173
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
DKIHG + TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQ
Sbjct: 174 DKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL ALY A L AG+P GVLNVV GFGPTAGAA+ASHMD+DK++FTGSTD G+ V++
Sbjct: 234 TPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA SNLKPV+LELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E +YD
Sbjct: 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYD 353
Query: 318 EFEKKLVEKAKA----WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
EF VEKAKA VVGDPF V QGPQ+D +QF++IL YI+ G GATL GG
Sbjct: 354 EF----VEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGD 409
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
G KGYYI+PT+F+NV +DMLIA++EIFGPV +++KFK ++E I+ ANNTRYGLAAG+
Sbjct: 410 RFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVF 469
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
T++L+ ANT+SR++R G +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQVK+VV
Sbjct: 470 TQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVV 529
Query: 494 TPIFNSPWL 502
TP+ N WL
Sbjct: 530 TPLKNPAWL 538
|
Length = 538 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 644 bits (1665), Expect = 0.0
Identities = 243/464 (52%), Positives = 318/464 (68%), Gaps = 6/464 (1%)
Query: 30 FVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
+VDS S +T E I+P TGE IA + EDVD AV AAR AF W + +ER I+
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFK--AWAKTPPSERAAIL 57
Query: 90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
LK ADL+EE + LA LE L+ GK + A+ G++P A +TLRYYAG A K+ GE L
Sbjct: 58 LKAADLLEERRDELAELETLETGKPLAEAR-GEVPRAIDTLRYYAGLARKLEGETLPSDP 116
Query: 150 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 209
+ YT REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPL AL A L
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 269
+ AG+P GVLNVV G G G A+ H D+DKVSFTGST+VGR++ +AAA NLK V+LE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAA-KNLKRVTLE 235
Query: 270 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 329
LGGK+PL++FDD D++ A + A+ G N G++C A SR+ V E IYDEF ++LVE AK+
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295
Query: 330 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 389
VGDP DP GP + KKQ +R+LSYIE K EGA LL GG+ +KGY++EPT+ +
Sbjct: 296 LKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355
Query: 390 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 449
VT DM IA+ EIFGPV++++ FK +EAI+ AN+T YGLAAG+ T DL A V+R + A
Sbjct: 356 VTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEA 415
Query: 450 GIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
G++WIN Y D + P+GG+K SGFGR+ G E L Y + K+V
Sbjct: 416 GMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 635 bits (1640), Expect = 0.0
Identities = 236/460 (51%), Positives = 316/460 (68%), Gaps = 3/460 (0%)
Query: 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95
G+TF TI+P TG +A +A D DVD AV AAR+AF+ G W R S AER+ ++L+ ADL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT 155
IE H + LA+LE LD GK S A D+P AANT R+YA A DK++GEV
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALI 120
Query: 156 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 215
REP+GVVG ++PWNFP M K++PALAAG ++++KPAEQ+PL AL A LA AG+P
Sbjct: 121 TREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLP 180
Query: 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275
GVLNVVPGFG TAG A+ HMD+D ++FTGST+VGR+ ++ + SNLK V LE GGKSP
Sbjct: 181 AGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240
Query: 276 LLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
++F D D++ AA+ A GI +N+GE+C A SR+ V E I DEF +K+V A+ W GD
Sbjct: 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGD 300
Query: 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTE 392
P DPA R G V + FD++L YIE GK EGA L+ GGK + G+++EPT+F VT
Sbjct: 301 PLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTP 360
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 452
DM IA+ EIFGPV++++ F + EEA+ AN++ YGLAA + T DL+ A+ V+R +RAG +
Sbjct: 361 DMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTV 420
Query: 453 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
W+NC+ D P+GG+K SG GRD L +L Y ++K+
Sbjct: 421 WVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 611 bits (1576), Expect = 0.0
Identities = 265/472 (56%), Positives = 335/472 (70%), Gaps = 2/472 (0%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR-F 80
T LFINGEFVDSV G T + +P TG+ I +IAE + DVD+AV+ A AF+ W
Sbjct: 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFE-TDWGLKV 65
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
SG++R + K ADL+E + + LA +EALD GK AK D+ +A+T RYY G ADKI
Sbjct: 66 SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
HG+V++ YT EPIGV G IIPWNFP M K++PALAAG T+++KP+E TPL
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
ALY L AG P GV+NVV G+G T G AI+SHMDIDKV+FTGST VGR+VM+AAA
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
SNLK V+LELGGKSP ++FDD D+ +A GI FN G++C A SR+YVQEGIYD+F
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 380
K+ EKAK VGDPF QGPQV + Q++RI+SYIE GK EGAT+ TGGK G +GY
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY 365
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
+IEPTIFT+VTEDM I K EIFGPV+A++KFKT EEAIK AN++ YGLAA + T ++N A
Sbjct: 366 FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNA 425
Query: 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
V+ +++AG +W+NCY P+GGYK SG GR+ G +L NY Q+K+V
Sbjct: 426 IRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 606 bits (1564), Expect = 0.0
Identities = 254/477 (53%), Positives = 331/477 (69%), Gaps = 10/477 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T LFIN EFV S G+T +T++P TGE IA + +EDVD AVKAAR+AF+ W + +
Sbjct: 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE-SWWSKVT 66
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
G ER ++ K ADL+E++ ++LA +EALD+GK + +GD+ +RYYAG ADKI
Sbjct: 67 GEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQ 126
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
G+ + S YTL EP GV G IIPWN+P M K++PALAAG T+++KPAE TPL
Sbjct: 127 GKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLS 186
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
LYFA+L K AG P GV+N++PG+G AG+A+A H D+DK++FTGST GR VM+AAA
Sbjct: 187 LLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA-Q 245
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
NLK V+LE GGKSP L+F+D D++ A A GI++N G+ C A+SR+YVQE IYD+F +
Sbjct: 246 NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVE 305
Query: 322 KLVEKAK-AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG---KPIGK 377
K VE K + VG PFD GPQV K Q+DR+LSYIE GK+EGA L+ GG
Sbjct: 306 KFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLG 365
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
KGY+I PTIFT+V +DM I K EIFGPV+ + KFKT EEAIK AN+T YGLAA + TKD+
Sbjct: 366 KGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDI 425
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
A+ V+R + AG++WIN + DSD P+GG+KMSG GR+ G L Y Q K+V
Sbjct: 426 RRAHRVARELEAGMVWINS--SNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 576 bits (1487), Expect = 0.0
Identities = 215/459 (46%), Positives = 293/459 (63%), Gaps = 9/459 (1%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
+I+P TGE AR+ E DVD AV AAR AF+ G W + + ER ++ + ADLIE +A
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 101 EVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLRE 158
E LA LE D GKL + + A RYYAG ADKI G V+ + + +T RE
Sbjct: 61 EELAELETRDNGKL--IRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218
P+GVV I PWN P + K++PALAAG T+++KP+E TP L A LA+ AG P GV
Sbjct: 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV 178
Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
+NVV GFGP G A+ H + K++FTG T+ GR + +AAA NL PV+LELGGKSP ++
Sbjct: 179 VNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-ENLAPVTLELGGKSPNIV 237
Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
FDD D++ A + + GI G+ CVA SR+ VQ IYDEF ++LV +A+A VGDP DP
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297
Query: 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDM 394
+ GP ++Q +++ Y+ + EGA +LTGG+ GY+ EPTI +VT DM
Sbjct: 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDM 357
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
IA+ E+FGPV++++ F EEAI AN++ YGLAAGI T+DL A+ V+R+I AG +W+
Sbjct: 358 RIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWV 417
Query: 455 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
N Y A P+GG+K SG GR+ G+E++ Y Q KSV
Sbjct: 418 NTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 565 bits (1458), Expect = 0.0
Identities = 222/436 (50%), Positives = 283/436 (64%), Gaps = 7/436 (1%)
Query: 62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121
D AV AAR AF W AER I+ K ADL+EE E LA LE L+ GK A G
Sbjct: 1 DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-G 57
Query: 122 DIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180
++ AA+T RYYAG A ++HGEV+ REP+GVVG I PWNFP + K+
Sbjct: 58 EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117
Query: 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 240
+PALAAG T+++KP+E TPL AL A L AG+P GVLNVV G G GAA+ASH +D
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177
Query: 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300
K+SFTGST VG+ +M+AAA NLK V+LELGGKSPL++FDD D++ A A+ G N G
Sbjct: 178 KISFTGSTAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236
Query: 301 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360
++C A+SR+ V E IYDEF ++LVE+ KA VG+P DP GP + Q DR+L+YIE
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIED 296
Query: 361 GKREGATLLTGGKPI-GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419
K EGA LL GGK + G KGY++ PT+ T+V DM IA+ EIFGPV+ ++ FK EEAI+
Sbjct: 297 AKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIE 356
Query: 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDC 478
AN+T YGLAAG+ T+DL A V+ + AG +WIN Y P+GG K SG GR+
Sbjct: 357 LANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREG 416
Query: 479 GLESLHNYLQVKSVVT 494
G L Y + K+V
Sbjct: 417 GPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 565 bits (1459), Expect = 0.0
Identities = 241/452 (53%), Positives = 314/452 (69%), Gaps = 3/452 (0%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
T++P TGE IAR+A+ EDVD AV AAR AF+ W AER I+ + A+LI +A
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANA 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
+ LA LE+LD GK A+ D+P AA+T RYYAG ADKI GEV+ + YT+REP+
Sbjct: 59 DELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPV 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GVVG I+PWNFP KV+PALAAG T+++KPAE TPL AL A L AG P GVLN
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
VV GFG AGAA+ H D+DK++FTGST VGR++MQ AA NLK VSLELGGKS ++F
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVFA 237
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D++ A A GI +N+G++C A SR+ V E IYDEF ++ A++ GDP DP
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400
+ GP V + QFDR+L Y++ G+ EGA LLTGGK G +G+++EPTIF V +M IA+ E
Sbjct: 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEE 357
Query: 401 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF 460
IFGPV+++M+F+ EEA++ AN T YGLAAG+ T+DL A+ V+ +++AG +WIN Y F
Sbjct: 358 IFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRF 417
Query: 461 DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
D P+GGYK SGFGR+ G E+L Y +VKSV
Sbjct: 418 DPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 566 bits (1461), Expect = 0.0
Identities = 236/473 (49%), Positives = 309/473 (65%), Gaps = 10/473 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
KL I+GE+VD S T E I+P TGE IA + EDVD AV AAR AF+ W R S
Sbjct: 1 YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER I+ + ADL+E AE LA L L+ GK S A+ G+I AA+ +RYYA A ++
Sbjct: 57 AEERAAILRRIADLLEARAEELAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLE 115
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
GE + + + REP+GVVG I PWNFP + K++PALAAG T+++KP+EQTPL
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
AL A LA AG+P GVLNVV G G G A+ +H D+D +SFTGST VGR + AAA +
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-A 234
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
NLKPV+LELGGKSP ++ +D D++ A D A+ G FN G+ C A+SR+ V E +YDEF +
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 381
+LV +A + VGDP DP+ GP + ++Q DR+ YIE EGA LL GGK G GY+
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYF 352
Query: 382 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441
+EPTI VT DM IA+ EIFGPV+ +++FK EEAI+ AN+T YGLAA I T+DL A
Sbjct: 353 VEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAF 412
Query: 442 TVSRSIRAGIIWINCY--FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
V+R + AG++ IN Y A + P+GG K SG GR+ G L + +VK+V
Sbjct: 413 RVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 561 bits (1449), Expect = 0.0
Identities = 223/472 (47%), Positives = 301/472 (63%), Gaps = 6/472 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
+I+GE+V++ SGKT + I+P GE IA + EG ED A+ AAR+AFD G WP E
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R ++ + AD I E AE LA LE L+ GK ++ DI AN RYYAG A K GEV
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEV 119
Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
+ + T+REP+GV G I PWN+P K++PALAAG T+++KP+E TPL +
Sbjct: 120 YDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIA 179
Query: 205 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
L + AG+P GV+N+V G G T GA +A D+D VSFTG T GR +M+AAA N+K
Sbjct: 180 LFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVK 238
Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
V+LELGGK+P ++F D D TA D AL G+ FN G++C A SR+ V+E I+D+F L
Sbjct: 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALA 298
Query: 325 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIGK---KGY 380
E+AK +G+ D GP V + +++LSYI+ GK EGA L+ GGK P G KGY
Sbjct: 299 ERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGY 358
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
++EPTIF +V M I + EIFGPV+ + +F T EEAI+ AN+T YGLA + TKD+ A
Sbjct: 359 FVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARA 418
Query: 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
N V+R +RAG +WIN Y + ++ P+GGYK SG GR+ G L Y + K +
Sbjct: 419 NRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 555 bits (1432), Expect = 0.0
Identities = 217/456 (47%), Positives = 296/456 (64%), Gaps = 7/456 (1%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
+P TGE +A++ EG +VD AV AA++AF W R S AER I+ K ADLIE A
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
+ LA+LE+LD GK + A+ DIP AA R++A ++ GE Y LR+P+
Sbjct: 59 DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GV G I PWN P + K++PALA G T+++KP+E TPL A A LA AG+P GV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
VV GFGP AGAA+ +H D+D +SFTG T GR +M+AAA NLKPVSLELGGK+P ++F
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVSLELGGKNPNIVFA 237
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D++ A D A+ N GE+C+A SR+ VQ IYDEF ++ VE+AKA VGDP DP
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLI 396
GP + K+ +++L Y+E + EGAT+LTGG + GY++EPT+ T + D +
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRV 357
Query: 397 AKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 456
A+ EIFGPV+ ++ F EEAI+ AN+T YGLAA + T+DL A+ V+R + AG +W+NC
Sbjct: 358 AQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNC 417
Query: 457 YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ D P+GG K SG GR+ G SL Y ++K+V
Sbjct: 418 WLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 533 bits (1375), Expect = 0.0
Identities = 214/481 (44%), Positives = 294/481 (61%), Gaps = 8/481 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M L+I+G +V++ SG+TFE I+P TGE +A + DV+ AV +A+Q
Sbjct: 1 MSRQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQ--K 58
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W + ER I+ + D++ E + LA LE LD GK + DI A+ L YYAG
Sbjct: 59 IWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
A + GE + + YT REP+GV I WN+P + K +PALAAG MI KP+
Sbjct: 119 LAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E TPL AL A + AG+PDGV NVV G G GA + H DI KVSFTG G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVM 237
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
AAA S LK V++ELGGKSPL++FDD D++ AAD+A+L ++ G++C +RV+VQ+ I
Sbjct: 238 AAAAAS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSI 296
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
FE +L+E+ + +GDP DPA GP V D++L YIE GK EGA LL GG+ +
Sbjct: 297 KAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERL 356
Query: 376 ----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 431
G ++ PT+FT+ T+DM I + EIFGPVM+++ F +E I AN+T YGLAAG
Sbjct: 357 TEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAG 416
Query: 432 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491
+ T DL+ A+ V + AGI WIN + ++ P GGYK SG GR+ G+ +L +Y Q+KS
Sbjct: 417 VFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKS 476
Query: 492 V 492
V
Sbjct: 477 V 477
|
Length = 488 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 524 bits (1351), Expect = 0.0
Identities = 228/481 (47%), Positives = 295/481 (61%), Gaps = 17/481 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
FINGE+V G+ F+ +P G+ + I EDVDLAV AA +AF W + S
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSV 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
AER I+ K AD IEE+ E+LAV E LD GK DIP A + RY+AG G
Sbjct: 60 AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ ++ Y EP+GVVG IIPWNFP M K++PALAAG T+++KPA QTPL
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179
Query: 203 LYFAHLAKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
L L +L G +P GV+NVV GFG AG +ASH I K++FTGST VGR +MQ AA
Sbjct: 180 LV---LMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA- 235
Query: 261 SNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
NL PV+LELGGKSP + FDD D + A+ LG FN+GE+C SR VQE I
Sbjct: 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESI 295
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-- 373
YDEF ++ VE+ +A VG+P DP G QV K Q ++ILSY++ GK EGA +LTGG+
Sbjct: 296 YDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERL 355
Query: 374 --PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 431
KGY+ EPT+ DM I + EIFGPV+A++ FK EEAI AN+T YGL G
Sbjct: 356 TLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGG 415
Query: 432 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491
+ T+D+N A V+R I+ G +W+NCY + + P+GGYK SG GR+ L +Y Q K+
Sbjct: 416 VWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKN 475
Query: 492 V 492
+
Sbjct: 476 I 476
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 523 bits (1349), Expect = 0.0
Identities = 223/484 (46%), Positives = 323/484 (66%), Gaps = 10/484 (2%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
KMP +LFINGEFVD+ GKT+ TI+P G I +++ EDVD AV AA++AF++
Sbjct: 3 KMP----HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFEN 58
Query: 75 GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
G W + + +R +M + ADL+EEH E LA +E+LD+G +++ A + + T RY+A
Sbjct: 59 GEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFA 118
Query: 135 GAADKIHGEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
G DKI G+ + +++A T REPIGV G +IPWN+P M K++ LAAG T+
Sbjct: 119 GWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTV 178
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
++KPA+ TPL AL FA L AG P GV+N++PG G G ++ H D+ K+ FTGST +
Sbjct: 179 VLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPI 238
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
G+ +M++ A SNLK VSLELGGKSPL+IF D D++ A M + + FNKGE C+A+ R++
Sbjct: 239 GKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLF 298
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370
V+E I+DEF +++VE+ K +GDP D + GPQ K D+++ Y E G +EGATL+
Sbjct: 299 VEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVY 358
Query: 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGL 428
GGK + + G++ EPT+FT+V + M IAK E FGP+M + KF V+ ++ AN+T YGL
Sbjct: 359 GGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGL 418
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 488
A+G+ TKD+N A VS + AG +++N Y D P+GG+K SGFG+D G E+L+ YL+
Sbjct: 419 ASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLK 478
Query: 489 VKSV 492
K+V
Sbjct: 479 TKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 516 bits (1331), Expect = 0.0
Identities = 216/457 (47%), Positives = 289/457 (63%), Gaps = 10/457 (2%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
DP TGE ARIA G DVD AV+AAR+AF+ W R S AER ++L+ A LI EHA+
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAFE-SGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIG 161
LA LE+LD GK + A+ D+ AA YY GAADK+HGE + + YT+REP G
Sbjct: 61 ELARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHG 119
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V GHIIPWN+P + V+PALAAG ++VKPAE PL AL A LA+ AG+P G LNV
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
V G G AGAA+ +H +D +SFTGS + G VM+AAA N+ PV+LELGGKSP ++F D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVVPVTLELGGKSPQIVFAD 238
Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF-DPAV 340
D+ A + + I+ N G+ C A SR+ V IYDE ++LVE+ +A VG DP +
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDL 298
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYIEPTIFTNVTEDMLIA 397
GP + KQ DR+ ++ + GA ++ GG+ GY++ PT+ +V D +A
Sbjct: 299 --GPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLA 356
Query: 398 KNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 457
+ EIFGPV+A+M F EAI AN T YGL AG+ T+D + A V+R +RAG +++N Y
Sbjct: 357 QEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNY 416
Query: 458 FAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
A + P+GG K SG GR+ GLE+L+NY Q K+V
Sbjct: 417 GAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 514 bits (1325), Expect = e-180
Identities = 214/460 (46%), Positives = 286/460 (62%), Gaps = 10/460 (2%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
I+P T I I EDVD AV+AAR+AF W + +GAER + A+ + E
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH---GEVLKM-SRALQGYTL 156
E LA LEA D GK A D+ A YYA A+++ + + S +
Sbjct: 59 EELAELEARDNGKPLDEA-AWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117
Query: 157 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216
REP+GVVG I PWNFP M KV+PALAAGCT+++KP+E T L L A +A AG+P
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
GVLNVV G G AGA +A+H IDK+SFTGST G QVMQAAA ++KPVSLELGGKSP+
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA-QDIKPVSLELGGKSPI 236
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
++FDD D+ A + A+ G +N G+IC A+SR+ V E I D F ++L A+A VGDP
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296
Query: 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGKKGYYIEPTIFTNVTEDM 394
+ VR GP V + Q++++LS+I GK EGA LL GG+ +KGY+I PT+F +V D
Sbjct: 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDS 356
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
I + EIFGPV+ + F T +EAI AN++ YGLAA ++++D + V+ ++ AGI+WI
Sbjct: 357 RIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWI 416
Query: 455 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
NC P+GGYK SG GR+ G L NYL+VK +
Sbjct: 417 NCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 510 bits (1316), Expect = e-179
Identities = 195/474 (41%), Positives = 274/474 (57%), Gaps = 13/474 (2%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+I+G +V +T + I+P T E I + G DVD AV AAR+AF W S
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVE 58
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER ++ + A+ E A+ LA L+ G + A+ + LR A A
Sbjct: 59 ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDF--- 115
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ + REPIGV G I PWN+P +KV+PALAAGCT+++KP+E PL A
Sbjct: 116 --EFEERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSA 173
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ A + AG+P GV N+V G GP G A+++H D+D VSFTGST G++V +AAA +
Sbjct: 174 IILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT- 232
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+K V+LELGGKS +I DD D+ A + N G+ C A +R+ V Y E E+
Sbjct: 233 VKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEI 292
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG-KKG 379
A+A+VVGDP DPA GP QFDR+ YI+ G EGA L+ GG +P G ++G
Sbjct: 293 AAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERG 352
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
Y+++PT+F +VT DM IA+ EIFGPV++++ + +EAI AN+T YGLA + + D
Sbjct: 353 YFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPER 412
Query: 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
A V+R +RAG + IN AF+ P+GGYK SG GR+ G L +L+VKS+
Sbjct: 413 ARAVARRLRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 508 bits (1311), Expect = e-178
Identities = 197/452 (43%), Positives = 282/452 (62%), Gaps = 5/452 (1%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
I+P TGE I + + D D A+ AA AF W + + ER I+ ++ADLI E AE
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAE 59
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLREPI 160
LA L L+ GK + A+ G++ AA+ L ++A A +I+G + + +++P+
Sbjct: 60 DLARLLTLEQGKPLAEAR-GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPV 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GVV I PWNFP M K++PALAAGCT+++KPAE+TPL AL A LA+ AG+P GVLN
Sbjct: 119 GVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLN 178
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
VV G G A+ + + K+SFTGST VG+ +M AA +K VSLELGG +P ++FD
Sbjct: 179 VVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFD 237
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D++ A D A+ N G+ CV ++R+YV E IYDEF +KLVE+ K VG+ D
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400
GP ++++ +++ + +E +GA +LTGGK +G GY+ EPT+ T+VT+DMLI E
Sbjct: 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEE 357
Query: 401 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF 460
FGPV ++ F T +E I AN+T YGLAA + T+DL A V+ ++ AG++ IN
Sbjct: 358 TFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS 417
Query: 461 DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
D++ P+GG K SG GR+ G E L YL+ K V
Sbjct: 418 DAEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 507 bits (1307), Expect = e-178
Identities = 221/451 (49%), Positives = 298/451 (66%), Gaps = 4/451 (0%)
Query: 44 PRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103
P G +AR AEG EDVD AV AAR+AFD GPWPR SGAER ++LK ADLI E L
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGV 162
A++E L++GK S A G+I GAA+ RY A A +HG+ + + G LREPIGV
Sbjct: 64 ALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGV 122
Query: 163 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 222
VG I PWNFP + K+ ALAAGCT++VKP+E T L A L AG+P GV+N+V
Sbjct: 123 VGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIV 182
Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 282
G+G T G A+ H D+D VSFTGST VG+ + AAA NLK VSLELGGK+P ++F D
Sbjct: 183 TGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFADA 241
Query: 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342
D++ AAD + G+ FN GE C + SR+ V E I D F +V +++ VGDP DP +
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEI 401
G +++ Q +I Y++ G+ EGATLL GG+ + G + +PTIFT+VT DM IA+ EI
Sbjct: 302 GAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEI 361
Query: 402 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD 461
FGPV++++ F TV+EAI AN+T YGL+AG+ +KD++ A TV+R IRAG +W+N +
Sbjct: 362 FGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGS 421
Query: 462 SDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ P+GG+K SG GR+ G + Y ++K+V
Sbjct: 422 PELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 507 bits (1307), Expect = e-177
Identities = 197/473 (41%), Positives = 278/473 (58%), Gaps = 6/473 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
LFI G +V +T + + P T E + R+ E DVD AV AAR+AFD+GPWPR S A
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER ++ + AD +E A+ LA L + G SW++ PG A LRYYA A E
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120
Query: 144 VLKMSRAL-QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ REP+GVV I+PWN P + +K++PALAAGCT+++KP+ +TPL A
Sbjct: 121 ERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDA 180
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
A A+ AG+P GV+NVVP G + H +DKVSFTGST GR++
Sbjct: 181 YLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ER 238
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
L V+LELGGKS ++ DD D++ A + L N G++CVA +R+ V YDE +
Sbjct: 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEA 298
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG-KKGY 380
L A VGDP DPA + GP +Q +R+ YI G+ EGA L+TGG P G +G+
Sbjct: 299 LAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGW 358
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
++EPT+F +V DM IA+ EIFGPV++++ + ++A++ AN++ YGL+ + T D+
Sbjct: 359 FVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERG 418
Query: 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
V+R IR G + +N F D P+GG+K SG GR+ G E L YL+ KS+
Sbjct: 419 LAVARRIRTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 493 bits (1272), Expect = e-172
Identities = 203/457 (44%), Positives = 284/457 (62%), Gaps = 10/457 (2%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
I+P TGE +A + EDVDLAVK+A+ A W SG ER I+ K ADL+ E
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
+ +A LE +D GK A++ DI +A+ L YYAG A + GE + + YT REP+
Sbjct: 59 DEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GV I WN+P + K +PALA G M+ KP+ TPL AL A + AG+PDGV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
VV G G T G + H D+ KVSFTGS G++VM AAA +K V+LELGGKSPL+IFD
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLIIFD 235
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D+ A + A++ ++G++C +RV+VQ I DEF ++LVE+ K +GDP D
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDML 395
+ G + ++ +++L YIE K+EGA +L GG+ + + G+Y+ P + T+ T+DM
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMT 355
Query: 396 IAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 455
I + EIFGPVM+++ F T EE I+ AN+T YGLAAG+ T+DL A+ V ++AG WIN
Sbjct: 356 IVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWIN 415
Query: 456 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
Y + P+GGYK SGFGR+ G +L +Y Q+K+V
Sbjct: 416 TYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 494 bits (1273), Expect = e-172
Identities = 193/479 (40%), Positives = 273/479 (56%), Gaps = 17/479 (3%)
Query: 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
TKL INGE V G+ +P TGE +A IAE VD AV AA AF W +
Sbjct: 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQT 58
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
+ ER +LK AD IEE+A+ A LE+L+ GK A +IP + R++AGAA +
Sbjct: 59 TPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCL 118
Query: 141 HGEVLKMSRA---LQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
G A L+G+T R+P+GVV I PWN+P M K++PALAAG T+++KP
Sbjct: 119 EG-----KAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKP 173
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
+E TPL AL A LA +P GVLNVV G G T G A+ H + VS TGS G+ V
Sbjct: 174 SEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHV 232
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ AAA ++K LELGGK+P+++FDD D++ + +N G+ C A+ R+Y Q G
Sbjct: 233 LSAAA-DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRG 291
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK 373
IYD+ KL VGDP D GP + DR+ ++E K G ++TGG+
Sbjct: 292 IYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGE 351
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
KGYY EPT+ +D I + E+FGPV+++ F ++A++ AN++ YGLA+ +
Sbjct: 352 APDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVW 411
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T+D+ A+ VS ++ G W+N +F S+ P+GG K SG+G+D L L +Y V+ V
Sbjct: 412 TRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 491 bits (1266), Expect = e-171
Identities = 222/489 (45%), Positives = 296/489 (60%), Gaps = 13/489 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH---GPWPR 79
+LFI GE+ + V GK ++P T E I I EDVD AV+AAR+AF W R
Sbjct: 9 QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWAR 68
Query: 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139
+GA R + A I E LA LE LD GK A D+ A YYA A+
Sbjct: 69 TTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEA 127
Query: 140 IHGEV-----LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
+ + L M +GY L+EP+GVVG I PWN+P M KV+PALAAGCT ++KP
Sbjct: 128 LDAKQKAPVSLPME-TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP 186
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
+E + L A + + G+P GVLNVV G G AGA +ASH +DK++FTGST GR++
Sbjct: 187 SELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
M AAA +KPVSLELGGKSP+++FDDVD++ A + A+ G + G+IC A+SR+ V E
Sbjct: 247 MTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHER 305
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK- 373
I EF +KLV+ AK + DP + R GP V + Q++++L +I K EGAT+L GGK
Sbjct: 306 IASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKR 365
Query: 374 -PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 432
KKG++IEPTI T+VT M I + E+FGPV+ + F T +EAI+ AN++ YGLA +
Sbjct: 366 PEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAV 425
Query: 433 MTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
++ DL VS + +AGI+WINC P+GG K SGFGR+ G L NYL VK V
Sbjct: 426 ISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485
Query: 493 VTPIFNSPW 501
I + PW
Sbjct: 486 TKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 490 bits (1262), Expect = e-171
Identities = 222/474 (46%), Positives = 306/474 (64%), Gaps = 8/474 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
LFINGE+V SG+T ++ +P GE ++ I + DVD AVKAA++AF W + +
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTV 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
AER I+ K AD+I+E+ E+LA++E LD GK + DIP AA+ RY+AG G
Sbjct: 60 AERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG 119
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ LREPIGVVG IIPWNFP M K++PALAAG T+++KP+ T L
Sbjct: 120 SANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSL 179
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
L A + + +P GV+N+V G G +G + +H +DK++FTGST+VGR V AAA
Sbjct: 180 LELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KK 237
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
L P +LELGGKS +IFDD + + A + A LGILFN+G++C A SR++VQEGIYDEF K
Sbjct: 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAK 297
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK----K 378
L EK + VG+P DP + G QV+K Q D+ILSY++ K EGA +LTGG + + K
Sbjct: 298 LKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDK 357
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
G++IEPT+ NVT DM +A+ EIFGPV ++KFKT +E I AN++ YGL G+ TKD+N
Sbjct: 358 GFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDIN 417
Query: 439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
A V+R++ G +W+N Y + P+GGYK SG GR+ L Y Q+K++
Sbjct: 418 RALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNI 471
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 485 bits (1250), Expect = e-169
Identities = 208/470 (44%), Positives = 293/470 (62%), Gaps = 7/470 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI+GE+V+ +G T E I+P GE IA + EDV+ A+ AAR+A G W S E
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQ--GEWAAMSPME 58
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ + ADLI E E LA LE LD GK + D+ A+ ++AG A ++GE+
Sbjct: 59 RGRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEI 118
Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
+ + YT+REP+GV I WN+P + K++PALAAG M+ KP+E TPL AL
Sbjct: 119 IPLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALK 178
Query: 205 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
A + + AG+P GV NVV G G G + +H D+ KVSFTG G+++M AAA +LK
Sbjct: 179 VAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAA-GHLK 237
Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
V++ELGGKSPL++FDD D+ +A D A+LG F+ G++C +RV+V + I + F +LV
Sbjct: 238 HVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLV 297
Query: 325 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGY 380
E+ + +GDPFD A GP + D++LSYIE GK EGATL TGG + G+
Sbjct: 298 ERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGF 357
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
++EPT+F + T+DM I + EIFGPVM ++ F +E I AN+T YGLA G+ T DL A
Sbjct: 358 FVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRA 417
Query: 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490
+ V+ + AG +WIN Y + ++ P+GGYK SG GR+ G +L +Y +VK
Sbjct: 418 HRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 476 bits (1228), Expect = e-166
Identities = 191/456 (41%), Positives = 269/456 (58%), Gaps = 10/456 (2%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
+DP TGE IA + + DVD AV AA AF W R + AER +LK AD IEE+AE
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAE 59
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT---LRE 158
LA LE+ + GK + ++PGA + R++AGAA + G L G+T RE
Sbjct: 60 ELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPA--AGEYLPGHTSMIRRE 117
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218
PIGVV I PWN+P M K++PALAAG T+++KP+E TPL L A LA +P GV
Sbjct: 118 PIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAA-EVLPPGV 176
Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
+NVV G G +AG A+ +H + VS TGS G++V +AAA LK V LELGGK+P+++
Sbjct: 177 VNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIV 235
Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
FDD D++ A +N G+ C A+ RVYV E +YDEF LVE A VGDP D
Sbjct: 236 FDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDE 295
Query: 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK 398
GP Q +R+ ++E A +LTGG+ GY+ EPT+ V +D I +
Sbjct: 296 DTEMGPLNSAAQRERVAGFVE-RAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQ 354
Query: 399 NEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 458
EIFGPV+ + F +EAI+ AN+ YGLA+ + T+D+ A +S + G +W+N +
Sbjct: 355 EEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHI 414
Query: 459 AFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
++ P+GG+K SG+G+D + +L +Y ++K V+
Sbjct: 415 PLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 472 bits (1218), Expect = e-164
Identities = 186/459 (40%), Positives = 259/459 (56%), Gaps = 9/459 (1%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
I+P T E I + DVD A+ AAR+AFD G W ER + + + +E E
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWST-DAEERARCLRQLHEALEARKE 60
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV---LKMSRALQGYTL-- 156
L L + G A+ + G LRY+A AD E + R G +
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVR 120
Query: 157 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216
REP+GVV I PWNFP + K++PALAAG T+++KPA TPL AL + +P
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPA 180
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
GV+NVV G G A+ + +D VSFTGST VGR++M AA + LK V LELGGKS
Sbjct: 181 GVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKSAN 239
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
++ DD D+ AA A+ + N G+ C ++R+ V YDE + L +A VGDP
Sbjct: 240 IVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPA 299
Query: 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG-KKGYYIEPTIFTNVTEDM 394
DP GP + Q DR+ YI G+ EGA L+TGG P G KG+Y+EPT+F +V DM
Sbjct: 300 DPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDM 359
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
IA+ EIFGPV+ ++ + +EA++ AN++ YGL+ G+ + D++ A V+R IR G + I
Sbjct: 360 RIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGI 419
Query: 455 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
N + D P+GGYK SG GR+ G+E L +L+ KS+
Sbjct: 420 NGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 467 bits (1204), Expect = e-162
Identities = 210/472 (44%), Positives = 306/472 (64%), Gaps = 3/472 (0%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
+LFINGE+ + +TFET+DP T +A+IA G D+D AV AAR F+ G W S
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
A+R+ ++ K ADL+E HAE LA+LE LD GK + DIPGAA +R+YA A DK++
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
GEV S +REP+GV+ I+PWNFP + K+ PALAAG ++I+KP+E++PL
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
A+ A LAK AG+PDGVLNVV GFG AG A++ H DID ++FTGST G+Q+++ A S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259
Query: 262 NLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
N+K V LE GGKS ++F D D+ AA GI +N+G++C+A +R+ ++E I DEF
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 380
L ++A+ W G P DPA G +D D + S+I G+ +G LL G+ G
Sbjct: 320 ALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAA- 377
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
I PTIF +V + +++ EIFGPV+ + +F + E+A++ AN+++YGL A + T+DL+ A
Sbjct: 378 AIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRA 437
Query: 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ +SR ++AG +++N Y D P+GGYK SG GRD L +L + ++K++
Sbjct: 438 HRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489
|
Length = 494 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 457 bits (1178), Expect = e-158
Identities = 205/472 (43%), Positives = 289/472 (61%), Gaps = 8/472 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
+INGEFV S SG+T + ++P TGE +A + ED D AV AA A W R E
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIE 58
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R + K ADLI E+A+ LA L + GK S A++ ++ A+ + Y A A +I GE+
Sbjct: 59 RAAYLRKLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEI 117
Query: 145 LKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ R + + + PIGVV I+PWNFP + K++PAL G T+++KP+E+TPL AL
Sbjct: 118 IPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNAL 177
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
FA L AG+P GVLN+V G G G A+ +H + +S TGST+ G+++M+AAA N+
Sbjct: 178 EFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENI 236
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
VSLELGGK+P ++ D D++ A + + N G++C + RVYV E IYDEF +KL
Sbjct: 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKL 296
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIGKKGYYI 382
VEK KA VGDPFD A GP V++ D++ +E GATLLTGGK P G+KGY+
Sbjct: 297 VEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFY 356
Query: 383 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 442
EPT+ TNV +DM I + EIFGPV+ ++KF +++EAI+ AN++ YGL + I T++LN A
Sbjct: 357 EPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMR 416
Query: 443 VSRSIRAGIIWINCYFAFDSDCPY-GGYKMSGFGRDCGLESLHNYLQVKSVV 493
+ + G +IN F++ + G+K SG G G L YLQ K V
Sbjct: 417 ATNELEFGETYINR-ENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 457 bits (1178), Expect = e-158
Identities = 205/464 (44%), Positives = 295/464 (63%), Gaps = 14/464 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
FING++V + K+F TI+P TGE +A + + ++EDVD AV AAR AF+ W G
Sbjct: 24 HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGH 81
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
R + + A I++H + AVLE+LD GK ++ DIP A ++AG A
Sbjct: 82 VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQL---- 137
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ L G+ +P+GVVG I+PWNFP M K+ PALA G T+++KPAE TPL AL
Sbjct: 138 ---LDTELAGW---KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
FA + AG+P GVLN+V G + G+A+A+H +DKV+FTGST+VGR + +A A +
Sbjct: 192 LFAEICAEAGLPPGVLNIVTG-NGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTG- 249
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K +SLELGGKSP ++FDD D+++A + + I FN+G++C A SR+ VQE + +E +KL
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 383
E+ VGDP D A+ G VD Q RI +E G+ EGA + G + KG +
Sbjct: 310 KERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYP 369
Query: 384 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 443
PT+FTNV IA+ EIFGPV+ ++ F+T +EA+ ANNT YGLAA + +++L++A V
Sbjct: 370 PTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEV 429
Query: 444 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 487
+ S++AG++WIN + FD+ +GGY+ SGFGR+ G E L+ YL
Sbjct: 430 ALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 448 bits (1153), Expect = e-154
Identities = 209/482 (43%), Positives = 290/482 (60%), Gaps = 13/482 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
FI+GEFV S SG+TFET+ P T E + +A G DVD A KAA++AF W
Sbjct: 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKA 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIH 141
AER+ + K ADLIE+HA+ +AVLE LD G+ + + AA R++A + +
Sbjct: 60 AERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQ-VIRAAENFRFFADKCEEAMD 118
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
G + L YT+R P+G VG I PWN P + K++PALA G T+++KPAE +PL
Sbjct: 119 GRTYPVDTHLN-YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLT 177
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
A A +AK AG+PDGV N+V GFG AG A+ +H D+ VSFTG T G +M+ A +
Sbjct: 178 AARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT 237
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
LK S+ELGGKSP+++FDD D+ A D + I GE C ASSR+ VQE I ++F +
Sbjct: 238 -LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVE 296
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGK 377
KLVE+ +A VG P DP GP + + ++L Y+E ++EGAT+L GG+ G+
Sbjct: 297 KLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGE 356
Query: 378 K---GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434
G Y+ PT+FT M IA+ EIFGPV+ ++ FK EEAI+ AN+TRYGLA + T
Sbjct: 357 DLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWT 416
Query: 435 KDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
D+ A+ V+ ++ AG+IW+N P+GG K SG GR+ G S Y + K+V
Sbjct: 417 NDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL 476
Query: 495 PI 496
+
Sbjct: 477 AL 478
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 445 bits (1146), Expect = e-153
Identities = 199/474 (41%), Positives = 279/474 (58%), Gaps = 12/474 (2%)
Query: 25 FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+I+GE+V G+ E +P T + + + A ED D A+ AA AF W R S
Sbjct: 4 YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPE 59
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
R I+ K D +E E LA L + GK A G++ A RYYAG A ++ GE
Sbjct: 60 ARADILDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLSGE 118
Query: 144 VLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
L +R ++ T REP+GVVG I PWNFP + K++PALA G T++ KPAE TP A
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ + AG+P GV N+V G G G A+ H D+D VSFTGST VGR++ AAA +
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI-AAAAAAR 237
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
V LE+GGK+PL++ DD D++ A + A+ G F+ G+ C ASSR+ V EGI+D F +
Sbjct: 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GKKGY 380
LVE+ KA VGD D V GP V ++Q ++ L YIE + EGA L+ GG+ + +GY
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
Y+ P +F VT DM IA+ EIFGPV A+++ + +EA+ AN+T +GL+AGI+T L A
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHA 417
Query: 441 NTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 492
R + AG++ +N A D P+GG K S +G R+ G +L Y +K+V
Sbjct: 418 THFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 437 bits (1126), Expect = e-150
Identities = 189/451 (41%), Positives = 258/451 (57%), Gaps = 8/451 (1%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
I+P TGE A + +D AV AA+ AF W ERR +L AD IE +AE
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAE 59
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIG 161
LA L L+ GK + A ++ GA LRY A EV++ + R+P+G
Sbjct: 60 ELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPD--EVIEDDDTRRVELRRKPLG 116
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
VV I+PWNFP + K++PAL AG T+++KP+ TPL L LA+ +P GVLNV
Sbjct: 117 VVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNV 175
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
V G G G A+ SH DI K+SFTGST G++VM +AA LK V+LELGG ++ D
Sbjct: 176 VSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTLKRVTLELGGNDAAIVLPD 233
Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341
VD++ A G N G++C A R+YV E IYDEF + LV AKA VVGD DP
Sbjct: 234 VDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTT 293
Query: 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401
GP +K Q+D++ +E K +GA +L GG+P+ GY+I PTI + E I E
Sbjct: 294 LGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQ 353
Query: 402 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD 461
FGPV+ ++K+ +E I AN++ YGL A + + DL A V+R + AG +WIN + A D
Sbjct: 354 FGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALD 413
Query: 462 SDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
D P+GG+K SG G + G+E L Y Q + +
Sbjct: 414 PDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 434 bits (1119), Expect = e-149
Identities = 209/481 (43%), Positives = 278/481 (57%), Gaps = 18/481 (3%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI GE+V V G+ F+ I P TG+ + ED++LA+ AA A + W + S AE
Sbjct: 4 FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAE 61
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ K AD +E + E+LAV E D GK DIP A + RY+AG G +
Sbjct: 62 RANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI 121
Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
++ Y EP+GVVG IIPWNFP M K++PALAAG +++KPAEQTP L
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181
Query: 205 FAHLAKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
L +L G +P GV+NVV GFG AG +AS I KV+FTG T GR +MQ A + N
Sbjct: 182 ---LMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYA-SEN 237
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAA--DMALLGIL---FNKGEICVASSRVYVQEGIYD 317
+ PV+LELGGKSP + F DV A D AL G + N+GE+C SR +QE IYD
Sbjct: 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALIQESIYD 297
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---- 373
F ++ +E+ KA G+P D G Q +Q ++ILSYI+ GK EGA +LTGG+
Sbjct: 298 RFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNEL 357
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
G Y PT F M I + EIFGPV+A+ FK EEA++ AN+T YGL AG+
Sbjct: 358 GGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVW 416
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
T+D N A + R I+AG +W NCY + + +GGYK SG GR+ L +Y Q K+++
Sbjct: 417 TRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLL 476
Query: 494 T 494
Sbjct: 477 V 477
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 428 bits (1102), Expect = e-147
Identities = 201/458 (43%), Positives = 283/458 (61%), Gaps = 12/458 (2%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
I+P TG+ +AR+ DVD AV AAR AF W + ER ++ + A + EHA
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
E LA+++ALD G S A +GD+ AA L Y+AG ++ GE + + YTLREP
Sbjct: 59 EELALIDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117
Query: 161 GVVGHIIPWNFPTTMFFM-KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL 219
GVV I+ +N P MF K++ LAAG T++VKP EQ PL AL A LA+ +P GV
Sbjct: 118 GVVARIVAFNHPL-MFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAR-EVLPPGVF 175
Query: 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279
N++PG G TAGAA+ H D+ +++ GS GR +M+AAA +K V+LELGGK+ L++F
Sbjct: 176 NILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVF 234
Query: 280 DDVDVNTAADMALLGILFN-KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
D D AAD A+ G+ F G+ C ++SR++V E IYDE ++VE+ A VGDP DP
Sbjct: 235 PDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDP 294
Query: 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYYIEPTIFTNVTEDM 394
A GP V ++Q+DR++ YI+ KREGA L+TGG P + G+Y+EPT+F +VT M
Sbjct: 295 ATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGM 354
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
IA+ EIFGPV+++++++ E + AN YGL A I T D++ A+ +R + AG +WI
Sbjct: 355 RIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWI 414
Query: 455 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
N P+GG K SG GR+ LE L +Y Q K+V
Sbjct: 415 NGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 421 bits (1085), Expect = e-144
Identities = 186/460 (40%), Positives = 268/460 (58%), Gaps = 11/460 (2%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
I+P TG+ I + DVD AV AA+ AF W ER ++ + AD +E +
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
E LA L AL+ G + A+ RY+ G A ++ GE L + YT+REP+
Sbjct: 59 EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPL 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GVVG I+PWN P + +K++PAL AG T+++K AE PL L A + +P GVLN
Sbjct: 119 GVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILA-QVLPAGVLN 177
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
V+ G+G GAA+ H D+DKV+FTGST+VG+ + +AAA L PVSLELGGKSP+++F
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLIPVSLELGGKSPMIVFP 236
Query: 281 DVDVNTAADMALLGILFNK-GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339
D D++ A D A+ G+ F + G+ C A SR++V E IYD F +KLV K +GDP D A
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEA 296
Query: 340 VRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKP----IGKKGYYIEPTIFTNVTEDM 394
G + +KQF ++ YI+ G GAT+L GG G++++PTIF+ V +
Sbjct: 297 TDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEW 356
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
+A+ EIFGPV+ + +K +E I AN++ YGLAA + T+DL A + ++ AG + +
Sbjct: 357 RLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQV 416
Query: 455 NCYFAFDSDCPYGGYKMSGFGRDCGLES-LHNYLQVKSVV 493
N YGG+K SG GR+ LE L ++ Q K+V
Sbjct: 417 NQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 416 bits (1071), Expect = e-142
Identities = 186/475 (39%), Positives = 276/475 (58%), Gaps = 9/475 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
FI+G V S K + +P T + IA +A + DVD AV +A +AF W + + A
Sbjct: 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAF-VSAWAKTTPA 60
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER I+L+ ADLIE+H E LA LE L +GK ++ ++ +AN LRY+AG A KI+GE
Sbjct: 61 ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE 120
Query: 144 VLKMSRAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
L S +T REP+GVV I+PWNF + K+ ALA GCT+++KP+E
Sbjct: 121 TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL L A LAK AG+PDGVLNVV G G GA + SH D+ KVSFTGS G+++
Sbjct: 181 TPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKI-GR 238
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A S+L V+LELGGK+ D D++ + L ++G++C A R YV +D
Sbjct: 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
E KL + ++ VG P D +V GP ++ FD++ SY++ + EG ++ GG+ +
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG 358
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
+GY+++PT+ + D + + E FGPV++ + ++ EE I+ N+T +GL A + T +L
Sbjct: 359 EGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNL 418
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ A I AG +W+N + D P+GG K SG GR+ G + +Y ++KSV
Sbjct: 419 SKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 410 bits (1055), Expect = e-139
Identities = 200/482 (41%), Positives = 290/482 (60%), Gaps = 24/482 (4%)
Query: 25 FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+I GE+VDS SG+TF++ +P E + DVD AV+AAR+AF W +
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPAP 59
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
R + + A+L+++ E LA L + GK + + GD+ A + +Y AG ++ GE
Sbjct: 60 RRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGE 118
Query: 144 VL------KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
+ K + T R+PIGVV I PWNFP + K+ PAL G T++ KPAE
Sbjct: 119 TVPSELPNKDA-----MTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAED 173
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TP AL L AG+P GV+NVV G G G A+ H D+D VSFTGST+VG ++ +
Sbjct: 174 TPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGET 233
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A N K V+LE+GGK+P+++ DD D++ A + AL G+ C A+SR+ V E +YD
Sbjct: 234 CARPN-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYD 292
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-- 375
EF K+ VE+AK VGD D GP +++ Q +++L+Y E GK EGATLL GG+ +
Sbjct: 293 EFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTG 352
Query: 376 --GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+KGY++EPT+FT+VT DM IA+ EIFGPV+AL++ ++EEAI+ AN+T YGL++ I
Sbjct: 353 GGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIY 412
Query: 434 TKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVK 490
T+D+N A R + AGI ++N A + P+GG K SG G R+ G +L + + K
Sbjct: 413 TEDVNKAFRARRDLEAGITYVNAPTIGA-EVHLPFGGVKKSGNGHREAGTTALDAFTEWK 471
Query: 491 SV 492
+V
Sbjct: 472 AV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 409 bits (1054), Expect = e-139
Identities = 195/479 (40%), Positives = 269/479 (56%), Gaps = 16/479 (3%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FING FV+S GKTF I+P G IAR+ E +VD AV AAR A GPW + + AE
Sbjct: 4 FINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTVAE 60
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R ++ AD IE + E D GK S A DIP A R +A E
Sbjct: 61 RADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTEC 120
Query: 145 LKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+M AL Y +R+P+GVVG I PWN P + KV PALA G T++VKP+E+TP
Sbjct: 121 FEMATPDGKGALN-YAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETP 179
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
A + GVP GV NVV GFGP +AG + H +D ++FTG T G +M+AA
Sbjct: 180 GTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A +KPVS ELGGK+ ++F D D + A L N G++C+ + RVYV+ I+D
Sbjct: 240 ADG-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDR 298
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG-----K 373
F L +A++ +G P DPA GP + + D++LSY EGAT++TGG
Sbjct: 299 FVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFG 358
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
G +++PTI+T + + + EIFGP + F + EE I AN+T YGLAA +
Sbjct: 359 DALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVW 418
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T+DL+ A+ V+R + GI+W+N +F D P+GG K+SG GR+ G+ SL Y ++ +V
Sbjct: 419 TEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 406 bits (1047), Expect = e-139
Identities = 173/439 (39%), Positives = 247/439 (56%), Gaps = 20/439 (4%)
Query: 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
DVD A AA A W ER I+ K A+++EE + +A ++G A
Sbjct: 1 DVDRAYAAAAAAQ--KAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKA- 57
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVL------KMSRALQGYTLREPIGVVGHIIPWNFPT 173
++ A LR AG + GE+L K S R P+GVVG I P+NFP
Sbjct: 58 AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVR-----RVPLGVVGVISPFNFPL 112
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPL-IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAA 232
+ V+PALA G +++KP +TP+ L A + + AG+P GVLNVVPG G G A
Sbjct: 113 ILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDA 172
Query: 233 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 292
+ H + +SFTGST VGR + + A +LK V+LELGG +PL++ DD D++ A A
Sbjct: 173 LVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAA 231
Query: 293 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFD 352
G ++G+IC+A+ R+ V E +YDEF +KLV KAKA VGDP DP GP ++++Q D
Sbjct: 232 FGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVD 291
Query: 353 RILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
R+ + +E GA LLTGG +G + +PT+ ++VT DM I + EIFGPV ++ F
Sbjct: 292 RVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFD 348
Query: 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKM 471
EEA++ AN+T YGL+A + T+DL A + + G++ IN D P+GG K
Sbjct: 349 DDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKA 408
Query: 472 SGFGRDCGLESLHNYLQVK 490
SG GR G SL + + +
Sbjct: 409 SGGGRFGGPASLEEFTEWQ 427
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 408 bits (1051), Expect = e-138
Identities = 196/473 (41%), Positives = 286/473 (60%), Gaps = 7/473 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T+ I G++ D+ GKTF +P TGE IA + + + + A+ +A AF W + +
Sbjct: 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKI 140
+ER I+ ++ DLI + E LA L L+ GK + +G++ A+ L Y+A A ++
Sbjct: 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGK--PLKEAIGEVAYGASFLEYFAEEAKRV 140
Query: 141 HGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+G+++ + L++P+GVVG I PWNFP M KV PALAAGCT++VKP+E TP
Sbjct: 141 YGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTP 200
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
L AL A LA AG+P GVLNVV G P G A+ + + K++FTGST VG+++M A A
Sbjct: 201 LTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM-AGA 259
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
+ +K VSLELGG +P ++FDD D++ A AL N G+ CV ++R+ VQEGIYD+F
Sbjct: 260 AATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKF 319
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379
+ + + VVGD F+ V QGP +++ ++ S+++ +GA +L GGK G
Sbjct: 320 AEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGG 379
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
+ EPT+ +VTEDMLI + E+FGPV L +FKT EEAI AN+T GLAA I T+DL
Sbjct: 380 TFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQR 439
Query: 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
A VS ++ GI+ +N P+GG K SG GR+ + YL++K V
Sbjct: 440 AWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 402 bits (1035), Expect = e-137
Identities = 177/446 (39%), Positives = 246/446 (55%), Gaps = 19/446 (4%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIE 97
E I P GE I R+ +EDV+ A+ AA++ P + ER I+ + A L+E
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAY---ERAEILERAAQLLE 57
Query: 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQ 152
E E A AL+AGK A+ ++ A TLR A A ++ GE +
Sbjct: 58 ERREEFARTIALEAGKPIKDAR-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRI 116
Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
G+T+REPIGVV I P+NFP + KV PA+AAG +++KPA QTPL AL A L A
Sbjct: 117 GFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEA 176
Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
G+P G LNVV G G T G A+ + + +SFTGS VG + + A LK V+LELG
Sbjct: 177 GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGS 233
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
+ +++ D D+ A + + G N G++C++ R++V E IYDEF ++ V K VV
Sbjct: 234 NAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVV 293
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
GDP D GP + + + +RI ++E GA LLTGGK G +EPT+ T+V
Sbjct: 294 GDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPP 350
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 452
DM + E+F PV++L F T++EAI AN++ YGL AG+ T DL A +R + G +
Sbjct: 351 DMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGV 410
Query: 453 WIN--CYFAFDSDCPYGGYKMSGFGR 476
IN F D PYGG K SG GR
Sbjct: 411 MINDSSTFRVDH-MPYGGVKESGTGR 435
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 401 bits (1032), Expect = e-136
Identities = 183/457 (40%), Positives = 256/457 (56%), Gaps = 7/457 (1%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
+IDP TGE I A+G + + A+ AAR+AFD W R ++L+ AD E +A
Sbjct: 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANA 59
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
E LA L AL+ GK+ A +I GA + LRYYAG A G +++ LREP+
Sbjct: 60 ERLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPM 118
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDGVL 219
GV G I+PWN P + ++PALAAGCT++VKPA QT I A LA++ +P GV+
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVV 178
Query: 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279
N+ G A + + D+D +SFTGST GR +M AAA LK + LELGGK+P ++F
Sbjct: 179 NLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPCIVF 237
Query: 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339
DD D++ A + G+ C+A SRV VQ I DE +L + A VG DPA
Sbjct: 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPA 297
Query: 340 VRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGK--KGYYIEPTIFTNVTEDMLI 396
GP +D+ DR+ +E GA +L GG KG ++ PT+ D I
Sbjct: 298 SDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADI 357
Query: 397 AKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 456
+ EIFGPV+ L F EA+ AN+T YGLAA + T+DL A V+R+IRAG +WIN
Sbjct: 358 VQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWIND 417
Query: 457 YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+ ++ GGY+ SG GR G+ +L ++++ K +
Sbjct: 418 WNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-134
Identities = 177/450 (39%), Positives = 271/450 (60%), Gaps = 6/450 (1%)
Query: 43 DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102
+P TGE I + + ++ + A++AA +AF W + ER ++ K+ +L+ E+ +
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFK--TWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ-GYTLREPIG 161
LA L L+ GK AK G+I AA+ L ++A A +++G+ + ++ + +++P+G
Sbjct: 61 LARLITLENGKPLKEAK-GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVG 119
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V I PWNFP M K ALAAGCT++VKPAEQTPL AL A LA+ AG+P GVLNV
Sbjct: 120 VCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179
Query: 222 VPG-FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
+ G G + + + K+SFTGST+VG+ +M+ +A S +K VS+ELGG +P ++FD
Sbjct: 180 ITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIVFD 238
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D++ A + A+ N G+ CV ++R+YV +GIYDEF KKL E K VG+ D V
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400
QGP +++K +++ +I +GA ++TGGK G + EPT+ +NVT DML++K E
Sbjct: 299 TQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEE 358
Query: 401 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF 460
FGP+ + KF EE I AN+T GLAA ++DL+ V+ ++ G++ IN
Sbjct: 359 TFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLIS 418
Query: 461 DSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490
+ P+GG K SG GR+ + YL+ K
Sbjct: 419 NVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 395 bits (1017), Expect = e-134
Identities = 175/456 (38%), Positives = 267/456 (58%), Gaps = 9/456 (1%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
F+ ++P G AR+A G ++D + A+ AA AF W + +ER I+LK A+++E
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58
Query: 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLR 157
A+ L L + G + A + LR AG ++ GE L ++R
Sbjct: 59 RADDLIDLLIDEGGSTYGKA-WFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
P+GVV I P+N+P + KV+ ALAAG T+++KP+E+TP+I L A + + AG+P G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177
Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
V NVV G G G + + V+FTGST VGR++ + A +LK ++LELGGK+PL+
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RHLKKITLELGGKNPLI 236
Query: 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337
+ D D++ A A G ++G+IC+++SR+ V+E +YDEF KK V +A VGDP D
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIA 397
P GP + +Q +RI +E +GA LLTGGK G + +PT+ T+VT DM I
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK---YDGNFYQPTVLTDVTPDMRIF 353
Query: 398 KNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 457
+ E FGPV +++ K EEA++ AN+T YGL+A I+T DL A ++ + +G++ IN
Sbjct: 354 REETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDP 413
Query: 458 FAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
D + P+GG K SGFGR+ G S+ + ++K +
Sbjct: 414 TILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 377 bits (971), Expect = e-127
Identities = 168/463 (36%), Positives = 240/463 (51%), Gaps = 20/463 (4%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
+P TGE + + D +V AV AR A W R +L++ + +HA+
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQ--RAWAALGVEGRAQRLLRWKRALADHAD 58
Query: 102 VLAVLEALDAGKLHSWAKMG-DIPGAANTLRYYAGAADKI-------HGEVLKMSRALQG 153
LA L + GK A G ++ A + + A A ++ G ++ +A
Sbjct: 59 ELAELLHAETGK--PRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVE 116
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y P GVVG I PWN+P + PALAAG +++KP+E TPL+ A AG
Sbjct: 117 Y---RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAG 173
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
P GVL VV G G T A I + +DKV+FTGS GR+VM AAA L PV LELGGK
Sbjct: 174 PPQGVLQVVTGDGATGAALIDA--GVDKVAFTGSVATGRKVMAAAA-ERLIPVVLELGGK 230
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
P+++ D D+ AA A+ G + N G+ C++ RVYV E +YDEF +LV KA+A G
Sbjct: 231 DPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPG 290
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED 393
GP +Q D + +++ +GA LTGG G + EPT+ T+V D
Sbjct: 291 ADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHD 350
Query: 394 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 453
M + + E FGPV+ +M +EAI AN++RYGL+A + ++DL A ++R + AG +
Sbjct: 351 MDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVS 410
Query: 454 INC--YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
IN A P+GG K SG GR G E L + + K++
Sbjct: 411 INDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 375 bits (964), Expect = e-125
Identities = 179/485 (36%), Positives = 267/485 (55%), Gaps = 27/485 (5%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I G+ V + + E+ +P E + + + KE+ + AV+AAR AF W R
Sbjct: 35 LVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPP 90
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIH 141
ER ++L+ A L+ LA L+ GK +WA+ D+ A + L YYA ++
Sbjct: 91 EERARLLLRAAALLRRRRFELAAWMVLEVGK--NWAEADADVAEAIDFLEYYAREMLRLR 148
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
G ++M + P+GV I PWNFP + + AL G T+++KPAE TP+I
Sbjct: 149 GFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVI 208
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT- 260
A + + AG+P GV+N +PG G G + H D+ ++FTGS +VG ++ + AA
Sbjct: 209 AAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKV 268
Query: 261 ----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL---FN-KGEICVASSRVYVQ 312
LK V E+GGK+ +++ +D D+ D A GI+ F +G+ C A SRV V
Sbjct: 269 QPGQKWLKRVIAEMGGKNAIIVDEDADL----DEAAEGIVRSAFGFQGQKCSACSRVIVH 324
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372
E +YDEF ++LVE+ KA VGDP DP V GP +DK DRI YIE GK EG LL GG
Sbjct: 325 ESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGG 383
Query: 373 KPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 430
+ + +GY+++PTIF +V D +A+ EIFGPV+A++K K +EA++ AN+T YGL
Sbjct: 384 EVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTG 443
Query: 431 GIMTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYL 487
G+ ++ R G ++ N A P+GG+KMSG G + G + L ++
Sbjct: 444 GVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFM 503
Query: 488 QVKSV 492
Q K+V
Sbjct: 504 QPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 366 bits (943), Expect = e-122
Identities = 162/485 (33%), Positives = 247/485 (50%), Gaps = 42/485 (8%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
I GE+V S G+TF + +P GE IAR+ EDV+ AV AAR+AF W +
Sbjct: 2 VIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAPR 58
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ + + + + E L L +L+ GK+ G++ + Y G + ++G
Sbjct: 59 RGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLT 117
Query: 145 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ R + P+GVVG I +NFP + + AL G T++ KP+E TPL A+
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177
Query: 204 ----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
A + + G+P GV+N+V G G G + + VSFTGST+VGR+V + A
Sbjct: 178 AVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
V LELGG + +++ DD D++ A L + G+ C + R+ V E +YDEF
Sbjct: 237 RRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GK 377
++LV+ K +GDP D GP +++ ++ L+ IE K +G T+LTGGK I G+
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGE 355
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
G Y+EPTI T VT+D I + E F P++ ++KF ++EEAI N+ GL++ I T+DL
Sbjct: 356 PGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDL 415
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDC----------------PYGGYKMSGFGRDCGLE 481
A W+ SDC +GG K +G GR+ G +
Sbjct: 416 REAFR----------WLG---PKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSD 462
Query: 482 SLHNY 486
+ Y
Sbjct: 463 AWKQY 467
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 361 bits (928), Expect = e-120
Identities = 181/457 (39%), Positives = 253/457 (55%), Gaps = 20/457 (4%)
Query: 28 GEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRG 87
GE+ D S +T + ++P TGE +A I KEDVD A +AA A W ER
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAA--QKEWAATLPQERAE 58
Query: 88 IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-- 145
I+ K A ++EE + + ++G A + A R A ++ G +L
Sbjct: 59 ILEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPS 117
Query: 146 ----KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
K +R REP+GVVG I PWNFP + V+PALA G +++KPA TP+
Sbjct: 118 DVPGKENR-----VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPIT 172
Query: 202 A-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
L A + + AG+P GVLNVV G G G A H +SFTGST VGR + + A
Sbjct: 173 GGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR 232
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
+LK V+LELGG +P ++ +D D++ A + A+ G ++G+IC+A +R+ V E +YDEF
Sbjct: 233 -HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFV 291
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 380
+K VE+ KA GDP DP GP +++ Q D +L IE EGATLL GG+ +G
Sbjct: 292 EKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGN 348
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
+EPT+ ++VT DM IA+ EIFGPV ++K EEA++ AN+T YGL+ + T DL
Sbjct: 349 VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERG 408
Query: 441 NTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGR 476
+R I AG+ IN D P+GG K SG GR
Sbjct: 409 VQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGR 445
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 358 bits (921), Expect = e-119
Identities = 164/446 (36%), Positives = 252/446 (56%), Gaps = 14/446 (3%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
E +P GE I + +E+V A++ A +A D +R I++K A+LIE
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58
Query: 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG----- 153
E LA L ++ GK ++ ++ + A A + GE + +
Sbjct: 59 RKEELAKLLTIEVGKPIKQSR-VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
+T+REPIGVVG I P+NFP +F K++PA+A G +++VKP+ TPL A+ A + + AG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+P GV+NVV G+G G I ++ ++ +SFTGST VG + A + K V+LELGG
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGT-GKKVALELGGS 236
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
P+++ D D+ A +A+ G N G++C A R+ V+E +YD+F K LVEK K VG
Sbjct: 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVG 296
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED 393
DP D + GP + + +R+ + + +G +L GGK +G + PT+ N T D
Sbjct: 297 DPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGK--RDEGSFFPPTVLENDTPD 354
Query: 394 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIW 453
M++ K E+FGPV+ + K K EEA++ AN+T YGL A + T D+N A V+R + AG +
Sbjct: 355 MIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVV 414
Query: 454 IN--CYFAFDSDCPYGGYKMSGFGRD 477
IN F +D+ P+GG+K SG GR+
Sbjct: 415 INDSTRFRWDN-LPFGGFKKSGIGRE 439
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 356 bits (915), Expect = e-117
Identities = 179/479 (37%), Positives = 258/479 (53%), Gaps = 29/479 (6%)
Query: 31 VDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIML 90
VD +G T E P TGE +A + DV+ A AR A W ER ++L
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83
Query: 91 KFADLIEEHAEVLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 148
+F DL+ E+ E L L L+ GK H++ ++ D+ A T RYYA A K+ L
Sbjct: 84 RFHDLVLENREELLDLVQLETGKARRHAFEEVLDV---ALTARYYARRAPKL----LAPR 136
Query: 149 R---ALQGYT----LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
R AL T LR+P GVVG I PWN+P T+ PAL AG +++KP QTPL
Sbjct: 137 RRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT 196
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
AL L AG+P + VV G GP G A+ + D + FTGST GR + + A
Sbjct: 197 ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-R 253
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
L SLELGGK+P+++ DD D++ AA A+ N G++C++ R+YV E IYDEF +
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVR 313
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP---IGKK 378
V +A +G +D + G + + Q + + ++++ +GAT+L GGK +G
Sbjct: 314 AFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGP- 372
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
+ EPT+ T VT DM +A+ E FGPV+++ V+EA++ AN+T YGL A + T D
Sbjct: 373 -LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTA 431
Query: 439 VANTVSRSIRAGIIWINCYF--AFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
++ IRAG + +N + A+ S D P GG K SG GR G E L Y + +++ T
Sbjct: 432 RGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIAT 490
|
Length = 524 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 351 bits (902), Expect = e-116
Identities = 182/489 (37%), Positives = 259/489 (52%), Gaps = 29/489 (5%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
KLFINGE+V+S + + + +P TGE IAR+ E+VD AV AA+ AF W
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATP 58
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
+R+ +M KF L+EE+ + LA L L+ GK + A+ GD+ + + +
Sbjct: 59 VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLK 117
Query: 142 GEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
GE L+ ++R + Y+ R+P+GVV I P+NFP + A+A G T ++KP+E+ P
Sbjct: 118 GEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPG 177
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
A+ A L + AG+PDGVLNVV G G A A+ H DI VSF GST VG + A
Sbjct: 178 AAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYI-YERAA 235
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGIYDEF 319
+N K V G K+ ++ D D+ A+ AL+G F G+ C+A S DE+
Sbjct: 236 ANGKRVQALGGAKNHAVVMPDADLEQTAN-ALVGAAFGAAGQRCMALSVAVAVGDEADEW 294
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PI 375
KLVE+AK VG DP GP + +RI IE G EGA L+ G+ P
Sbjct: 295 IPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPG 354
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
+ G ++ PTI NVT DM I K EIFGPV+++++ T++EAI N YG A I T+
Sbjct: 355 YENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTR 414
Query: 436 DLNVANTVSRSIRAGIIWINC-------YFAFDSDCPYGGYKMSGFGRDC---GLESLHN 485
A R + AG++ IN +F+F GG+K S FG D G + +
Sbjct: 415 SGAAARKFQREVDAGMVGINVPIPVPLAFFSF------GGWKGSFFG-DLHFYGKDGVRF 467
Query: 486 YLQVKSVVT 494
Y Q K+V +
Sbjct: 468 YTQTKTVTS 476
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 345 bits (889), Expect = e-115
Identities = 163/435 (37%), Positives = 227/435 (52%), Gaps = 7/435 (1%)
Query: 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
++ A+ A AF W + S AER ++ K ADL+ E + LA L L+ GK + A+
Sbjct: 1 IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR- 57
Query: 121 GDIPGAANTLRYYA-GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
++ A RYYA A + E ++ + A + Y EP+GVV I+PWNFP F
Sbjct: 58 AEVEKCAWICRYYAENAEAFLADEPIE-TDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRF 116
Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
+P L AG T+++K A P AL L + AG P+GV + A IA +
Sbjct: 117 AAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPR-V 175
Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
V+ TGS GR V A NLK LELGG P ++ DD D++ A A+ G L N
Sbjct: 176 RGVTLTGSERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234
Query: 300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359
G+ C+A+ R V E +YDEF +K VE A VGDP D GP K D + +E
Sbjct: 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVE 294
Query: 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419
GATLL GGK G + PT+ T+VT M E+FGPV A++K K EEAI
Sbjct: 295 EAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIA 354
Query: 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCG 479
AN++ +GL + T DL A V+R + AG+++IN D P+GG K SG+GR+ G
Sbjct: 355 LANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELG 414
Query: 480 LESLHNYLQVKSVVT 494
+ ++ +K+V
Sbjct: 415 RFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 344 bits (884), Expect = e-114
Identities = 160/439 (36%), Positives = 235/439 (53%), Gaps = 15/439 (3%)
Query: 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
D D AV+AA AF W + +ERR I+LK ADL+E + + G +WA
Sbjct: 1 DADQAVEAAAAAF--PAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG 58
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ-GYTLREPIGVVGHIIPWNFPTTMFFM 178
++ AA LR A +I G + + ++EP+GVV I PWN P +
Sbjct: 59 F-NVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117
Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV---PGFGPTAGAAIAS 235
++ LAAG T+++K +E +P + AG+P GVLNVV P P A+ +
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177
Query: 236 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295
H + KV+FTGST VGR + + AA +LKPV LELGGK+P ++ +D D++ AA+ AL G
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236
Query: 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355
N G+IC+++ R+ V E I DEF +KL A+ G V G V DR+
Sbjct: 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVSAAAADRVK 291
Query: 356 SYIEHGKREGATLLTGGKP-IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414
++ +GA L+ GG G + PTI NVT DM I E FGPV+++++ K
Sbjct: 292 ELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDE 351
Query: 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSG 473
EEA++ AN++ YGL+A + T+DL A V++ I +G + IN D P+GG K SG
Sbjct: 352 EEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSG 411
Query: 474 FGRDCGLESLHNYLQVKSV 492
+GR G + + + K +
Sbjct: 412 YGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 345 bits (886), Expect = e-114
Identities = 178/475 (37%), Positives = 264/475 (55%), Gaps = 11/475 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
KL INGE V G+ +P TGE I IAE E VD AV+AA AF W + +
Sbjct: 3 KLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
R +LK AD+IEE+A+V A LE+ + GK +IP + R++AGAA + G
Sbjct: 60 KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119
Query: 143 EVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
L L+G+T R+P+GVV I PWN+P M K++PALAAG +++KP+E TP
Sbjct: 120 --LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITP 177
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
L AL A LAK P GV+N++ G G T G + H + VS TGS G ++ A
Sbjct: 178 LTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
S +K +ELGGK+P+++FDD D++ + +N G+ C A+ R+Y Q GIYD
Sbjct: 237 PS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTL 295
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKK 378
+KL G P D + GP +R++ +E K G ++TGG+
Sbjct: 296 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGN 355
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
GYY PT+ +D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+
Sbjct: 356 GYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVG 415
Query: 439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
A+ +S ++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ ++
Sbjct: 416 RAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 344 bits (884), Expect = e-114
Identities = 170/466 (36%), Positives = 246/466 (52%), Gaps = 25/466 (5%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
P TGE + + + DV+ A AR A W AER + L+F DL+ E +
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRD 58
Query: 102 VLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR---ALQGYT- 155
L L L+ GK H++ ++ D A RYYA A++ +LK R A+ T
Sbjct: 59 ELLDLIQLETGKARRHAFEEVLD---VAIVARYYARRAER----LLKPRRRRGAIPVLTR 111
Query: 156 ---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
R P GVVG I PWN+P T+ PAL AG +++KP QT L AL+ L A
Sbjct: 112 TTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA 171
Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
G+P + VV G G G AI + D V FTGST GR V + A L SLELGG
Sbjct: 172 GLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERAG-RRLIGCSLELGG 228
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
K+P+++ +D D++ AA A+ N G++CV+ R+YV E +YDEF ++ V + +A +
Sbjct: 229 KNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRL 288
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT 391
G D G + + Q DR+ ++++ +GAT+L GG+ G Y+ EPT+ T VT
Sbjct: 289 GAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVT 348
Query: 392 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 451
EDM + E FGPV+++ + +EAI+ AN+T YGL A + T+D ++ +RAG
Sbjct: 349 EDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGT 408
Query: 452 IWINCYFAF---DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
+ +N +A D P GG K SG GR G E L Y + ++V
Sbjct: 409 VNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 339 bits (871), Expect = e-112
Identities = 173/467 (37%), Positives = 270/467 (57%), Gaps = 5/467 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
INGE++D+ +G+ + +P G+ + + + ++ A+ AA +A W + E
Sbjct: 14 LINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 71
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ ++ +L+ EH + LA L L+ GK + AK G+I AA+ + ++A +I+G+
Sbjct: 72 RANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT 130
Query: 145 LKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ +A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP AL
Sbjct: 131 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 190
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A LA AG+P GV NVV G G + S+ + K+SFTGST++GRQ+M+ A ++
Sbjct: 191 ALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDI 249
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K VSLELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +KL
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 383
+ +GD + V GP +D+K ++ +I +GA ++ GGK G + +
Sbjct: 310 QQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQ 369
Query: 384 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 443
PTI +V + +AK E FGP+ L +FK + I AN+T +GLAA +DL+ V
Sbjct: 370 PTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 429
Query: 444 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490
++ GI+ IN + P+GG K SG GR+ + +YL++K
Sbjct: 430 GEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 336 bits (865), Expect = e-111
Identities = 161/445 (36%), Positives = 235/445 (52%), Gaps = 18/445 (4%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
E +P TGE +AR+A +D++ A+ AA +AF P R I+L +EE
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58
Query: 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQG 153
E LA L+AGK A+ G++ A +T R A A +I+GEVL + QG
Sbjct: 59 RFEELAETIVLEAGKPIKDAR-GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
R PIG V I P+NFP + KV+PA+AAGC ++KPA +TPL AL + G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177
Query: 214 VPDGVLNVVPGFGPTAGAAI-ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
+P G +V+P A + + I +SFTGS VG + A K V LELGG
Sbjct: 178 LPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
+ +++ D D++ AA + G + G+ C++ RV V +YDEF+ +LV + KA
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
GDP D A GP + + + +R+ ++ GA LLTGGK + G +EPTI +V
Sbjct: 293 GDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK---RDGALLEPTILEDVPP 349
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 452
DM + E+FGPV+ + + +EA+ + N++++GL AG+ T+DL A + G +
Sbjct: 350 DMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGV 409
Query: 453 WINCYFAFDSD-CPYGGYKMSGFGR 476
IN F D PYGG K SG GR
Sbjct: 410 VINDVPTFRVDHMPYGGVKDSGIGR 434
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 331 bits (851), Expect = e-109
Identities = 163/460 (35%), Positives = 255/460 (55%), Gaps = 15/460 (3%)
Query: 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99
+ +P GE I ++ D+ D + A+ AR ++ ER I+ + ADL+++
Sbjct: 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKR 59
Query: 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGY 154
AE A + A + GK A+ ++ A +TLR A A++I GE + + S +
Sbjct: 60 AEEFAKIIACEGGKPIKDAR-VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAW 118
Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
T+REP+GVV I P+NFP + K++PA+A GC +++KPA +TPL AL A + AGV
Sbjct: 119 TIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGV 178
Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
P+GVL VV G G A A+ + +SFTGS VG + A K ++LELGG +
Sbjct: 179 PEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAG---GKRIALELGGNA 235
Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
P+++ D D++ A + G ++ G++C++ R+YV E +YDEF + V K VGD
Sbjct: 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGD 295
Query: 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394
P D GP + ++ +R+ ++E GA LL GG+ G +PT+ +V D
Sbjct: 296 PLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDT 352
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
++ E FGPV+ ++++ EEAI+ AN+T YGL AGI T+DLNVA + + G + +
Sbjct: 353 KLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMV 412
Query: 455 NCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
N AF +D P+GG K SG GR+ ++ + K+VV
Sbjct: 413 NDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 329 bits (845), Expect = e-108
Identities = 162/450 (36%), Positives = 237/450 (52%), Gaps = 21/450 (4%)
Query: 47 GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVL 106
G + + D DVD A A A W ER ++ + ADL+EEHA+ +A
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAA--QRAWAATPPRERAAVLRRAADLLEEHADEIADW 58
Query: 107 EALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHI 166
++G + A ++ A L AG + GE+L + R P+GVVG I
Sbjct: 59 IVRESGSIRPKAG-FEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVI 117
Query: 167 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP-----LIALYFAHLAKLAGVPDGVLNV 221
P+NFP + V+PALA G +++KP +TP +IA F AG+P GVL+V
Sbjct: 118 SPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFE----EAGLPAGVLHV 173
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
+PG G AG A+ ++ +SFTGST VGR+V +AA +LK VSLELGGK+ L++ DD
Sbjct: 174 LPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDD 231
Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341
D++ AA G ++G+IC+A+ R V E + D + KL KAK VGDP V
Sbjct: 232 ADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVA 291
Query: 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401
GP ++ +Q DR+ + ++ GA L GG G + PT+ + V M EI
Sbjct: 292 LGPLINARQLDRVHAIVDDSVAAGARLEAGGT---YDGLFYRPTVLSGVKPGMPAFDEEI 348
Query: 402 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD 461
FGPV + F + EEA+ AN+T YGL+AGI+++D+ A ++ +R G++ IN D
Sbjct: 349 FGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVND 408
Query: 462 SDC--PYGGYKMSGFG-RDCGLESLHNYLQ 488
+ P+GG SG G R G + + Q
Sbjct: 409 -EPHNPFGGMGASGNGSRFGGPANWEEFTQ 437
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-108
Identities = 166/482 (34%), Positives = 244/482 (50%), Gaps = 22/482 (4%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP--WPRF 80
K INGE+ +S SGKT E P GE I + ++ +AA A+D G WP
Sbjct: 3 KYLINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEIL---EAAETAYDAGRGWWPTM 58
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
ER + KFADL++E+ E +A L + GK A + ++ + +R ++
Sbjct: 59 PLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKRL 117
Query: 141 HGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
G+ L ++ REP+GVV I P+N+P + K+ PAL G T++ KPA
Sbjct: 118 DGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPA 177
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
Q L+ + A AG P GV+NVV G G G + +H ID +SFTGST+VG ++
Sbjct: 178 TQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+ +K + LELGGK P ++ D D+ AA + G L G+ C A RV V E +
Sbjct: 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESV 294
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
DE + L E+ VG P+D V P +D K D + I+ +GAT+L GG
Sbjct: 295 ADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGG-- 352
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
+ G I PT+ VT DM +A E FGPV+ +++ +EEAI+ AN + YGL A I TK
Sbjct: 353 REGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTK 412
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
D+N A ++ ++ G + IN D P+ G K SG G + + + L+ +
Sbjct: 413 DINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGT----QGIGDALRSMTRRK 468
Query: 495 PI 496
I
Sbjct: 469 GI 470
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 324 bits (832), Expect = e-107
Identities = 135/260 (51%), Positives = 173/260 (66%), Gaps = 5/260 (1%)
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
AAR AF W AER I+ K ADL+EE E LA LE L+ GK A G++
Sbjct: 1 AAARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVAR 57
Query: 126 AANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184
A +T RY AG ADK+ G L + Y REP+GVVG I PWNFP + K++PAL
Sbjct: 58 AIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPAL 117
Query: 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
AAG T+++KP+E TPL AL A L + AG+P GV+NVVPG G GAA+ SH +DK+SF
Sbjct: 118 AAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISF 177
Query: 245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 304
TGST VG+ +M+AAA NLKPV+LELGGKSP+++ +D D++ A + A+ G FN G+IC
Sbjct: 178 TGSTAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICT 236
Query: 305 ASSRVYVQEGIYDEFEKKLV 324
A+SR+ V E IYDEF +KLV
Sbjct: 237 AASRLLVHESIYDEFVEKLV 256
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 322 bits (828), Expect = e-105
Identities = 165/485 (34%), Positives = 247/485 (50%), Gaps = 17/485 (3%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
++L I+G+ V +G TF T++P T E + A+ D+D A+ AAR+AFD W R +
Sbjct: 1 SRLLIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT 59
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
R + + D + H E L L + G + G + L + A A+
Sbjct: 60 ALRVRCLR-QLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYA 118
Query: 142 -----GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
G M + RE +GVVG I PWNFP + K+ PALAAG T+++KPA
Sbjct: 119 WTTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAP 178
Query: 197 QTPLIALYFAHLAKLAG----VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
TP A A L +L P GV+N+V GA +A +D VSFTGST GR
Sbjct: 179 DTPWCA---AVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGR 235
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
VM AA + LK V LELGGKS ++ DD D+ A MA + + G+ C ++R+ V
Sbjct: 236 AVMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVP 294
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372
YDE + GDP DP GP + +Q DR+ SY++ EG GG
Sbjct: 295 RARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGG 354
Query: 373 -KPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 430
+P + +G+++EPT+ + + +A+ EIFGPV+ ++ ++A++ AN++ YGL+
Sbjct: 355 GRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSG 414
Query: 431 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490
+ D A V+ +R G + +N + +D P+GGYK SG GR+ G+ YL+ K
Sbjct: 415 TVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETK 474
Query: 491 SVVTP 495
+ T
Sbjct: 475 LIATA 479
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 316 bits (813), Expect = e-103
Identities = 158/462 (34%), Positives = 220/462 (47%), Gaps = 23/462 (4%)
Query: 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
I P G IA E V A++ AR A W ER+ I+ + +L+ + +
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTD 58
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-----LQGYTL 156
+A G+ + A G+I G RY A+ E L R + Y
Sbjct: 59 EIAEELTWQMGRPIAQAG-GEIRGMLERARYMISIAE----EALADIRVPEKDGFERYIR 113
Query: 157 REPIGVVGHIIPWNFPTTMFFMKVS---PALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
REP+GVV I PWN+P + V+ PAL AG +I+K + QTPL FA AG
Sbjct: 114 REPLGVVLIIAPWNYP---YLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAG 170
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+P+GV V+ T+ A IA ID VSFTGS GR + +AAA V LELGGK
Sbjct: 171 LPEGVFQVLHLSHETSAALIADP-RIDHVSFTGSVAGGRAIQRAAA-GRFIKVGLELGGK 228
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
P + D D++ AA+ + G FN G+ C + R+YV E IYD F + V K + +G
Sbjct: 229 DPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLG 288
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGK-KGYYIEPTIFTNV 390
DP DP+ GP V + D + + I +GA L G P K G Y+ PT+ TNV
Sbjct: 289 DPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNV 348
Query: 391 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 450
M + + E FGPV+ +MK K+ EAI N++ YGL A + TKD+ A + + G
Sbjct: 349 DHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETG 408
Query: 451 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+++N D + G K SG G + KS
Sbjct: 409 TVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 313 bits (805), Expect = e-101
Identities = 169/482 (35%), Positives = 255/482 (52%), Gaps = 23/482 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I GE + + +I+P E + R+++ KE + A++AA +AF+ W ++S
Sbjct: 39 LIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSP 94
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKI- 140
+R I+L+ A +I + +AGK WA+ D A + L YYA K+
Sbjct: 95 EDRARILLRAAAIIRRRKHEFSAWLVKEAGK--PWAEADADTAEAIDFLEYYARQMLKLA 152
Query: 141 HGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTT-MFFMKVSPALAAGCTMIVKPAEQT 198
G+ V Y P+GV I PWNFP M M ++ + AG T+++KPA T
Sbjct: 153 DGKPVESRPGEHNRY-FYIPLGVGVVISPWNFPFAIMAGMTLAA-IVAGNTVLLKPASDT 210
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
P+IA F + + AG+P GV+N VPG G G + H ++FTGS +VG ++ + A
Sbjct: 211 PVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270
Query: 259 ATSN-----LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
A LK V E+GGK +++ +D D++ AA+ + G+ C A SR V E
Sbjct: 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHE 330
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
+YDE +K+VE K VG+P D A GP +++ FD+I+SYIE GK EG L+ GG+
Sbjct: 331 DVYDEVLEKVVELTKELTVGNPEDNAY-MGPVINQASFDKIMSYIEIGKEEG-RLVLGGE 388
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
KGY+I+PTIF +V I + EIFGPV+A +K K + A++ ANNT YGL ++
Sbjct: 389 GDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVI 448
Query: 434 TKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGF-GRDCGLESLHNYLQVK 490
+ + R G ++ N C A P+GG+ MSG + G + L +LQ K
Sbjct: 449 SNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAK 508
Query: 491 SV 492
+V
Sbjct: 509 TV 510
|
Length = 514 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 310 bits (795), Expect = e-101
Identities = 159/461 (34%), Positives = 244/461 (52%), Gaps = 19/461 (4%)
Query: 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99
E +P TGE + + G +E + A+ A + +R I+ K A L+E
Sbjct: 2 EVRNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEAR 56
Query: 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGY 154
E A L L++G ++ AA+ LR+ A A + GE +A + +
Sbjct: 57 REEFARLITLESGLCLKDT-RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIF 115
Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
TLREP+GVV I P+N P K++PA+AA +++KP+E+TPL A+Y A L AG+
Sbjct: 116 TLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGL 175
Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
P +L+VV G G + +H D+D V+FTG VG+ + AAT+ K LELGG
Sbjct: 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGND 232
Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
PL++ DD D+ AA +A+ G N G+ C A R+ V E + DEF LVEK+ A VVGD
Sbjct: 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292
Query: 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394
P DPA G +D++ +I + +E +GA +L G ++G PT+ +V D
Sbjct: 293 PMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGN---QRQGALYAPTVLDHVPPDA 349
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
+ E FGPV +++ K ++EAI +N+T YGL++G+ T DL+ + + G + +
Sbjct: 350 ELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNV 409
Query: 455 NCYFAFDSD-CPYGGYKMSGFG-RDCGLESLHNYLQVKSVV 493
N F S+ P+GG K SG G ++ E++ VK+
Sbjct: 410 NEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 304 bits (780), Expect = 2e-98
Identities = 163/476 (34%), Positives = 237/476 (49%), Gaps = 38/476 (7%)
Query: 43 DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102
DP TG+ + + EDVD A+ AAR A W + S AERR ++ I E+ E
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEE 59
Query: 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ---------- 152
+ + D GK A +G+I +R+ HGE +AL+
Sbjct: 60 ICRVACRDTGKTMVDASLGEILVTCEKIRWTLK-----HGE-----KALRPESRPGGLLM 109
Query: 153 ----GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 208
EP+GVVG I+ WN+P + AL AG ++VK +EQ + +F +
Sbjct: 110 FYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSI 169
Query: 209 AKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
+ G ++ +V T A+ SH ID ++F GS VG++VM AAA S L
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LT 227
Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
PV LELGGK P ++ DD D++ A + + G + G+ C+ RV V E IYD+ + L
Sbjct: 228 PVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILT 287
Query: 325 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGY 380
++ +A G P D V G + +FDR+ + +GA LL GGK P +G+
Sbjct: 288 DRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGH 347
Query: 381 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
Y PT+ +VT DM IA+ E+FGPVM +MK EEA++ AN+T YGL A + KD+ A
Sbjct: 348 YFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRA 407
Query: 441 NTVSRSIRAGIIWINCY--FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
++ + G++ IN + + P+GG K SGFGR G E L KSV
Sbjct: 408 RRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 3e-97
Identities = 145/411 (35%), Positives = 226/411 (54%), Gaps = 14/411 (3%)
Query: 89 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 148
+ K A I E A ++ L + GK+ A++ ++ A+ + Y A A + GE+++
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSD 59
Query: 149 RALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
R + + +GV I+PWNFP + K++PAL G T+++KP+E TP A+ FA
Sbjct: 60 RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 119
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
+ G+P GV N+V G G T G +A + + VS TGS G ++M AAA N+ V
Sbjct: 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAA-KNITKVC 178
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
LELGGK+P ++ DD D++ A + + N G++C + RVYVQ+GIYD+F +L E
Sbjct: 179 LELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238
Query: 328 KAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 386
+A G+P + + GP ++ +R+ + EGA + GGK + KGYY PT+
Sbjct: 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTL 298
Query: 387 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 446
+V ++M I E FGPV+ ++ F T+EEAI AN++ YGL + I T++LNVA +
Sbjct: 299 LLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKG 358
Query: 447 IRAGIIWIN-----CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
++ G +IN F + G++ SG G G LH YLQ + V
Sbjct: 359 LKFGETYINRENFEAMQGF-----HAGWRKSGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 293 bits (752), Expect = 1e-93
Identities = 156/480 (32%), Positives = 244/480 (50%), Gaps = 18/480 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L INGE V++ K +I+P E + +++ +E + A++AA +AF+ W +
Sbjct: 35 LVINGERVET-ENK-IVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFE--AWKKTDP 90
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI-- 140
ER I+ K A ++ + L + GK + A ++ A + + YYA ++
Sbjct: 91 EERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADA-EVAEAIDFMEYYARQMIELAK 149
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
V Y + P GV I PWNFP + + G +++KPAE P+
Sbjct: 150 GKPVNSREGETNQY-VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA- 259
IA F + + AG+P GV+ VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268
Query: 260 ----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+LK V E+GGK +++ +D D+ AA A G+ C A SR V E +
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YDE ++ VE ++ VG P V GP +D+K F++I+ YIE GK EG L++GG
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGD 387
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
KGY+I PTIF +V +A+ EIFGPV+A ++ +EA++ ANNT YGL G+++
Sbjct: 388 DSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISN 447
Query: 436 DLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDC-GLESLHNYLQVKSV 492
+ + N G ++ N A P+GG+KMSG G + L ++Q K+V
Sbjct: 448 NRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 255 bits (652), Expect = 2e-79
Identities = 149/489 (30%), Positives = 243/489 (49%), Gaps = 33/489 (6%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD--HGPWPRFS 81
L I GE V + E P G + + + +DV R+AF P +
Sbjct: 6 LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDV-------RRAFAIAAAYRPTLT 56
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER I+ + A L+ E ++ L L++G L + ++ A+ L + A A +
Sbjct: 57 RYERSAILDRAAALLAARKEEISDLITLESG-LSKKDSLYEVGRVADVLTFAAAEALRDD 115
Query: 142 GEVLKMSRALQG-----YTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
G++ G +T REP+ GV+ I P+N P K++PA+A M+VKP+
Sbjct: 116 GQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPS 175
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E+TPL ALY A + AG+P +L VV G + ++ +D V+FTG +G+ +
Sbjct: 176 EKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI- 234
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
AA + + LELGG PL++ +D D++ AAD+A+ G N G+ C A R+ VQE +
Sbjct: 235 --AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESV 292
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
D F + LVEK +AW GDP DP+V G +D+ + + +GA LL G
Sbjct: 293 ADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGN--- 349
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
+ G PT+ V M + + E FGPV +++F +++AI+ +N+T YGL++G+ T
Sbjct: 350 VRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTN 409
Query: 436 DLNVANTVSRSIRAGI--IWINCYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKSV 492
L+ ++ G +W + + P+GG K SG G G E++ ++ +K+
Sbjct: 410 RLDYITRFIAELQVGTVNVWEVPGYRLELT-PFGGIKDSGLGYKEGVQEAMKSFTNLKT- 467
Query: 493 VTPIFNSPW 501
++ PW
Sbjct: 468 ----YSLPW 472
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 254 bits (651), Expect = 4e-79
Identities = 154/486 (31%), Positives = 239/486 (49%), Gaps = 26/486 (5%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+I G+F + SG +P T E ++A ++VD AV +AR+ F W + S
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
A+R ++L++ L++EH + +A L + GK HS A GD+ + + G + G
Sbjct: 60 AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKG 118
Query: 143 EVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
E +++ + Y++R+P+GV I P+NFP + A+A G T ++KP+E+ P
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
A+ A L AG PDGVLNVV G A + H D+ VSF GST +GR + ++
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHT-TGSA 236
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
+ K V G K+ +++ D D + AAD + G+ C+A S V G DE+
Sbjct: 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAA-VLVGAADEWVP 295
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY- 380
++ E+A+ +G DP GP + + DR+ S I G EGA +L G+ GY
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYE 355
Query: 381 ---YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
++ PT+ V M + EIFGPV+ +++ T+EEAI N + YG I T+D
Sbjct: 356 EGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDG 415
Query: 438 NVANTVSRSIRAGIIWINC-------YFAFDSDCPYGGYKMSGFG--RDCGLESLHNYLQ 488
A I G + +N YF+F G+K S FG G + H Y +
Sbjct: 416 AAARRFQHEIEVGQVGVNVPIPVPLPYFSF------TGWKDSFFGDHHIYGKQGTHFYTR 469
Query: 489 VKSVVT 494
K+V T
Sbjct: 470 GKTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 4e-78
Identities = 159/493 (32%), Positives = 235/493 (47%), Gaps = 66/493 (13%)
Query: 27 NGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86
+GE+ G +I P GE IAR+ + ED + +KAA++AF W R A +R
Sbjct: 4 DGEWG--GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--W-RDVPAPKR 58
Query: 87 G-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-----MGDIPGAANTLRYYAGAADKI 140
G I+ + D + + E L L +L+ GK+ M DI + G + ++
Sbjct: 59 GEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDI------CDFAVGLSRQL 112
Query: 141 HGEVLKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
+G + R G+ + E P+GVVG I +NFP ++ + AL G ++ KP+
Sbjct: 113 YGLTIPSERP--GHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPT 170
Query: 198 TPLIAL----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
TPL A+ A + + G+P + ++V G G G A+ + VSFTGST VGRQ
Sbjct: 171 TPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQ 229
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF----NKGEICVASSRV 309
V QA A + LELGG + +++ +D D+ D+A+ +LF G+ C + R+
Sbjct: 230 VGQAVA-ARFGRSLLELGGNNAIIVMEDADL----DLAVRAVLFAAVGTAGQRCTTTRRL 284
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
V E IYDE ++L + K +GDP D GP K D L+ IE K +G T+L
Sbjct: 285 IVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVL 344
Query: 370 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 429
GGK I G Y+EPTI D I K E F P++ ++KF T+EEAI N GL+
Sbjct: 345 FGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLS 403
Query: 430 AGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDC----------------PYGGYKMSG 473
+ I T DL R W+ SDC +GG K +G
Sbjct: 404 SSIFTTDL----------RNAFRWLG---PKGSDCGIVNVNIGTSGAEIGGAFGGEKETG 450
Query: 474 FGRDCGLESLHNY 486
GR+ G ++ Y
Sbjct: 451 GGRESGSDAWKQY 463
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 2e-76
Identities = 142/469 (30%), Positives = 240/469 (51%), Gaps = 20/469 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I GE+VD+ ++ P E + A+ DK + + A++AA AF W +
Sbjct: 21 LVIGGEWVDTKERMV--SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAF--KTWKDWPQ 76
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIH 141
+R ++LK ADL+ L + GK +W + + D+ A + +RYYA AA ++
Sbjct: 77 EDRARLLLKAADLLRRRRRELIATLTYEVGK--NWVEAIDDVAEAIDFIRYYARAALRLR 134
Query: 142 G--EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ + +G I PWNFP +F + +A G T+I KPAE
Sbjct: 135 YPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAV 194
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
++ + AG P GV+ +PG G GA + H I ++FTGS + G+++ +AAA
Sbjct: 195 VVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAA 254
Query: 260 -----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ K + +E GGK+ +++ + D + ++ +G+ C A+SR+ + +G
Sbjct: 255 RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQG 314
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374
Y+ ++L+++A+ VG P + GP +D +Q ++LSYIEHGK EG L+ GGK
Sbjct: 315 AYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKR 373
Query: 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE--EAIKSANNTRYGLAAGI 432
+ +GY++ PT+ V IA+ EIFGPV++++++K + EA++ AN+T YGL G+
Sbjct: 374 LEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGV 433
Query: 433 MTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG 479
++ R G ++IN A P+GG+K+SG G
Sbjct: 434 YSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 248 bits (635), Expect = 3e-76
Identities = 153/469 (32%), Positives = 223/469 (47%), Gaps = 36/469 (7%)
Query: 25 FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
INGE ++ G+ IDP I ++ D EDVD A+ A AF W
Sbjct: 36 IINGEETET--GEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAF--AGWSATPVE 91
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER I+ K ADL+E + L L A +AGK + A ++ A + RYYA A ++ +
Sbjct: 92 ERAEILEKAADLLEANRGELIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQARELFSD 150
Query: 144 VLKMSR--ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
L G L GV I PWNFP +F +++ ALAAG T+I KPAEQTPLI
Sbjct: 151 PELPGPTGELNGLEL-HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLI 209
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ--AAA 259
A L AGVP VL +VPG G G A+ +H ID V FTGST+ + + + A
Sbjct: 210 AARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAER 269
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
+ P+ E GGK+ +++ A + + G+ C A +Y+QE I + F
Sbjct: 270 DGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERF 329
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379
+ L + VGDP+D + GP +DK + ++ E + E A L+ G
Sbjct: 330 IEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNG 388
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDL 437
Y++ P I V L E+FGP++ +++FK ++EAI+ N T YGL GI ++D
Sbjct: 389 YFVAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDE 446
Query: 438 NVANTVSRSIRAGIIWIN-----------CYFAFDSDCPYGGYKMSGFG 475
+ AG ++IN P+GG+ +SG G
Sbjct: 447 REIEYWRERVEAGNLYINRNITGAIVGRQ---------PFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 2e-75
Identities = 149/460 (32%), Positives = 221/460 (48%), Gaps = 18/460 (3%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
TI+P TGE + ++VD A+ A F + + A+R ADL+E A
Sbjct: 5 TINPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEA 62
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--------KMSRALQ 152
+ +A L L+ GK + AK + A RYYA H E L A +
Sbjct: 63 DQVAALMTLEMGKTLASAK-AEALKCAKGFRYYAE-----HAEALLADEPADAAAVGASR 116
Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
Y +P+GVV ++PWNFP +PAL AG ++K A P ALY A L + A
Sbjct: 117 AYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA 176
Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
G PDG + G A AI + + TGS GR V A +K LELGG
Sbjct: 177 GFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG-DEIKKTVLELGG 234
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
P ++ D++ AA+ A+ + N G+ C+A+ R V +YD F +K V + A V
Sbjct: 235 SDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRV 294
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
GDP DP GP ++ D + ++ GAT+L GGK G++ PT+ T++T
Sbjct: 295 GDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITP 354
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 452
DM + E+FGPV +L + ++EAI+ AN T +GL + T+D + AG +
Sbjct: 355 DMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQV 414
Query: 453 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+IN + P+GG K SG+GR+ + + +K+V
Sbjct: 415 FINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 237 bits (607), Expect = 6e-73
Identities = 148/450 (32%), Positives = 224/450 (49%), Gaps = 29/450 (6%)
Query: 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-DHGPWPRFSGAERRGIMLKFADLIEE 98
E ++P + I + D +D A+ A F D W ER I+ + ADL+EE
Sbjct: 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEE 59
Query: 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQG 153
A+ LA+L A + GK AK+ ++ A + + A ++ G + M S
Sbjct: 60 RADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIA 118
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
+T REPIGVV I +N P + +V+PA+AAGC +IVKPA TPL L F L AG
Sbjct: 119 FTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAG 178
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDK----VSFTGSTDVGRQVMQAAATSNLKP---V 266
+P+G VP A+A + D SF GS VG + S L P
Sbjct: 179 LPEGWCQAVP-----CENAVAEKLVTDPRVAFFSFIGSARVGWML-----RSKLAPGTRC 228
Query: 267 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 326
+LE GG +P+++ D++ + G ++ G++CV+ RV+V I D+F ++L
Sbjct: 229 ALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAA 288
Query: 327 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 386
A+ VVGDP DP GP + ++ DR+ ++ GA LL GGK + Y PT+
Sbjct: 289 AEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTY--APTV 346
Query: 387 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 446
+ D ++ EIFGPV+ + + ++EAI AN+ A + TKDL+VA R
Sbjct: 347 LLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRR 406
Query: 447 IRAGIIWINCYFAFDSD-CPYGGYKMSGFG 475
+ A + +N + AF D P+ G + SG+G
Sbjct: 407 LDATAVMVNDHTAFRVDWMPFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 229 bits (587), Expect = 2e-69
Identities = 150/459 (32%), Positives = 233/459 (50%), Gaps = 21/459 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
L+ING+++ G+ FE+ +P +GE + + + VD AV+AAR AF W R S
Sbjct: 3 LWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFE 59
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER+ I+ +FA L+EE+ E LA + A + GK W ++ N + A + GE
Sbjct: 60 ERQAIVERFAALLEENKEELAEVIARETGKPL-WEAATEVTAMINKIAISIQAYHERTGE 118
Query: 144 VLKMSRALQGYT--LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+ LR P GVV P+NFP + + PAL AG T++ KP+E TP
Sbjct: 119 K---RSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPW 175
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
+A L + AG+P GVLN+V G G G A+A+H DID + FTGS + G + + A
Sbjct: 176 VAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAG 234
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEF 319
K ++LE+GG +PL+I + D++ A + + + G+ C + R+ V +G D F
Sbjct: 235 QPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAF 294
Query: 320 EKKLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGK 377
+LV AK VG +P G + ++ +++ G +LL +
Sbjct: 295 LARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAG 354
Query: 378 KGYYIEPTIF--TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
G + P I T V E + E FGP++ ++++ +EAI+ ANNTR+GL+AG+++
Sbjct: 355 TGL-LTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSD 410
Query: 436 DLNVANTVSRSIRAGII-WINCYFAFDSDCPYGGYKMSG 473
D + IRAGI+ W S P+GG SG
Sbjct: 411 DREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 227 bits (582), Expect = 2e-69
Identities = 135/419 (32%), Positives = 206/419 (49%), Gaps = 7/419 (1%)
Query: 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
VD AV AAR AF W S ER I+ +FA+L++ + E LA L + + GK W
Sbjct: 1 QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGK-PLWEA 57
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
++ A + A + GE + P GV+ P+NFP +
Sbjct: 58 QTEVAAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGH 117
Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
+ PAL AG T++ KP+E TP +A L + AG+P GVLN+V G G G A+A+H I
Sbjct: 118 IVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGI 176
Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
D + FTGS G + + A K ++LE+GG +PL+++D D++ AA + +
Sbjct: 177 DGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236
Query: 300 GEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358
G+ C + R+ V +G D F ++LVE AK +G P GP + R L
Sbjct: 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQ 296
Query: 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI 418
+ G L + + ++ P I +VT+ + EIFGP++ + ++ +EAI
Sbjct: 297 QDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAI 355
Query: 419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGR 476
AN TR+GL+AG+++ D + IRAGI+ N S P+GG +SG R
Sbjct: 356 ALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHR 414
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 221 bits (567), Expect = 4e-67
Identities = 136/439 (30%), Positives = 205/439 (46%), Gaps = 61/439 (13%)
Query: 69 RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA---GKLHSWAKMGDIPG 125
+ AF P P S ERR + + L+ ++ + LA EA+ A + + +I
Sbjct: 8 KAAFLANPPP--SLEERRDRLDRLKALLLDNQDALA--EAISADFGHRSRHETLLAEILP 63
Query: 126 AANTLRYYAGAADKIHG-------EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178
+ +++ A + V + + +P+GVVG I+PWN+P ++
Sbjct: 64 SIAGIKH---ARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYP---LYL 117
Query: 179 KVSP---ALAAGCTMIVKPAEQTP--------LIALYFA--HLAKLAGVPDGVLNVVPGF 225
+ P ALAAG +++KP+E TP L+A YF +A VV G
Sbjct: 118 ALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVA-----------VVTG- 165
Query: 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285
G AA S + D + FTGST VGR VM+AAA NL PV+LELGGKSP +I D D+
Sbjct: 166 GADVAAAF-SSLPFDHLLFTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLA 223
Query: 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
AA+ G L N G+ CVA V V E +EF V AKA V P + P
Sbjct: 224 KAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEF----VAAAKAAVAK--MYPTLADNPD 277
Query: 346 ----VDKKQFDRILSYIEHGKREGATL--LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKN 399
++++ + R+ +E + +GA + L + PT+ NVT+DM + +
Sbjct: 278 YTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQE 337
Query: 400 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-CYF 458
EIFGP++ ++ + +++EAI N LA +D + V R +G + IN
Sbjct: 338 EIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLL 397
Query: 459 -AFDSDCPYGGYKMSGFGR 476
D P+GG SG G
Sbjct: 398 HVAQDDLPFGGVGASGMGA 416
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 2e-65
Identities = 128/427 (29%), Positives = 206/427 (48%), Gaps = 35/427 (8%)
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHSWAKMG 121
V R+ F G S R+ + ++ E+ E + AL D GK + A +
Sbjct: 3 LVARLRETFLTGK--TRSLEWRKAQLKALKRMLTENEE--EIAAALYADLGKPPAEAYLT 58
Query: 122 DIPGAANTLRYY----AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177
+I + + V + + + Y + EP+GVV I PWN+P +
Sbjct: 59 EIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLAL 118
Query: 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG--VPDGVLNVVPGFGPTAGAAIAS 235
+ A+AAG T+++KP+E P + A LAKL + VV G A A +A
Sbjct: 119 APLIGAIAAGNTVVLKPSELAPATS---ALLAKLIPKYFDPEAVAVVEGGVEVATALLAE 175
Query: 236 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295
D + FTGS VG+ VM+AAA +L PV+LELGGKSP ++ D ++ AA G
Sbjct: 176 PFD--HIFFTGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGK 232
Query: 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ----VDKKQF 351
N G+ C+A V V E I DE ++L + K + DP ++ P ++++ F
Sbjct: 233 FLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-----KESPDYGRIINERHF 287
Query: 352 DRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
DR+ S ++ GK ++ GG+ + K+ YI PTI +V+ D + + EIFGP++ ++ +
Sbjct: 288 DRLASLLDDGK-----VVIGGQ-VDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTY 341
Query: 412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGY 469
++EAI+ N+ LA + ++D V V +G + +N A + P+GG
Sbjct: 342 DDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGV 401
Query: 470 KMSGFGR 476
SG G
Sbjct: 402 GNSGMGA 408
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 3e-63
Identities = 146/447 (32%), Positives = 221/447 (49%), Gaps = 41/447 (9%)
Query: 31 VDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
+ + G+ + P + +A D E V+ A+ AAR AF W R ER I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAF--PAWSRTPVEERAAIL 613
Query: 90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
+ ADL+E + L L +AGK A + ++ A + RYYA A ++ G
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGA----PE 668
Query: 150 ALQGYT-----LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
L G T LR GV I PWNFP +F +V+ ALAAG T+I KPAEQTPLIA
Sbjct: 669 KLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAA 728
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
L AG+P VL ++PG G T GAA+ + I V+FTGST+ R + + A +
Sbjct: 729 EAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG 788
Query: 264 KPVSL--ELGGKSPLL---------IFDDVDVNTAADMALLGILFNKGEICVASSRV-YV 311
V L E GG++ ++ + DDV V +A A G+ C A RV +V
Sbjct: 789 PIVPLIAETGGQNAMIVDSTALPEQVVDDV-VTSAFRSA--------GQRCSA-LRVLFV 838
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
QE I D + L VGDP + GP +D + + ++IE KRE L
Sbjct: 839 QEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQL 898
Query: 372 GKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGL 428
P G + G+++ PT F + + + E+FGP++ ++++K +++ I + N T YGL
Sbjct: 899 PLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGL 956
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWIN 455
GI ++ A+ ++ +R G +++N
Sbjct: 957 TLGIHSRIEETADRIADRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 216 bits (550), Expect = 3e-63
Identities = 154/436 (35%), Positives = 216/436 (49%), Gaps = 11/436 (2%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
I G FV+S S + I+P T E ++++ E+ AV AA+QAF W
Sbjct: 117 LIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL--WRNTPITT 174
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R+ +MLKF +LI ++ + LA+ + GK GDI + + G A GE
Sbjct: 175 RQRVMLKFQELIRKNMDKLAMNITTEQGKTLK-DSHGDIFRGLEVVEHACGMATLQMGEY 233
Query: 145 L-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
L +S + Y++REP+GV I P+NFP + A+ G T I+KP+E+ P ++
Sbjct: 234 LPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASV 293
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A LA AG+PDGVLN+V G T AI DI VSF GS G + AA
Sbjct: 294 ILAELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG- 351
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K + +G K+ L+ D +++ + L G+ C+A S V V G +E KL
Sbjct: 352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV-VFVGDAKSWEDKL 410
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKG 379
VE+AKA V +P GP + K+ +RI I+ G +GA LL G+ P +KG
Sbjct: 411 VERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKG 470
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
+I PTI + VT DM K EIFGPV+ M+ + +EAI N +YG A I T
Sbjct: 471 NFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAA 530
Query: 440 ANTVSRSIRAGIIWIN 455
A I AG I IN
Sbjct: 531 ARKFQMDIEAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (539), Expect = 7e-63
Identities = 140/457 (30%), Positives = 216/457 (47%), Gaps = 15/457 (3%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
+++P TGE ++ + +D++ A++ A F W + R + + +
Sbjct: 11 SVNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARS 68
Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL----QGYT 155
E +A + + GK + A+ ++ +AN +YA HG +LK L Q
Sbjct: 69 EEMAQMITREMGKPINQAR-AEVAKSANLCDWYAE-----HGPAMLKAEPTLVENQQAVI 122
Query: 156 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 215
P+G + I+PWNFP P L AG ++K A A A + K AG+P
Sbjct: 123 EYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIP 182
Query: 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275
GV + I + I V+ TGS G + A A + LK LELGG P
Sbjct: 183 QGVYGWLNADNDGVSQMI-NDSRIAAVTVTGSVRAGAAI-GAQAGAALKKCVLELGGSDP 240
Query: 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
++ +D D+ A A+ G N G++C A+ R ++EGI F ++ V A A +GDP
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDP 300
Query: 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDML 395
D GP D + +E EGA LL GG+ I G Y PT+ NVT +M
Sbjct: 301 RDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMT 360
Query: 396 IAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 455
+ E+FGPV A+ K E A++ AN++ +GL+A I T D A ++ + G ++IN
Sbjct: 361 AFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFIN 420
Query: 456 CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
Y A D+ +GG K SGFGR+ LH + +++V
Sbjct: 421 GYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 211 bits (539), Expect = 1e-62
Identities = 146/457 (31%), Positives = 229/457 (50%), Gaps = 17/457 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
LFI+G++ G++F + +P T E + + A V+ AV AAR AF W R S
Sbjct: 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLE 57
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER ++ +FA L+EE E LA + A + GK W ++ + A + GE
Sbjct: 58 ERIAVVQRFAALLEERKEALARVIARETGK-PLWETRTEVASMIGKVAISIKAYHERTGE 116
Query: 144 V---LKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ RA+ LR P GVV P+NFP + + PAL AG T++ KP+E TP
Sbjct: 117 SENPMPDGRAV----LRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTP 172
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
+A L + AG+P GVLN+V G G A+A+H DID + FTGS++ G + + A
Sbjct: 173 WVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFA 231
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DE 318
K ++LE+GG +PL++ + D++ A + + + G+ C + R+ V +G D
Sbjct: 232 GRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDA 291
Query: 319 FEKKLVEKAKAWVVGD-PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
F +LVE A+ VG +P G + + R+L+ G L + +
Sbjct: 292 FLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDP 351
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
+ P I +VT + E FGP++ ++++ +EAI ANNTR+GL+AG+++ D
Sbjct: 352 GAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDR 410
Query: 438 NVANTVSRSIRAGII-WINCYFAFDSDCPYGGYKMSG 473
+ + IRAGI+ W S P+GG SG
Sbjct: 411 ELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 2e-62
Identities = 130/435 (29%), Positives = 187/435 (42%), Gaps = 68/435 (15%)
Query: 77 WPRFSGAERRGIMLKFADLIEEH---------------------AEVLAVLEALD--AGK 113
+ AER + + I E+L VL ++
Sbjct: 14 LRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKH 73
Query: 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173
L W K P T G KI EP GV I PWN+P
Sbjct: 74 LKKWMK----PKRVRTPLLLFGTKSKIR---------------YEPKGVCLIISPWNYPF 114
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 233
+ F + A+AAG T I+KP+E TP + A + + A D V V G A +
Sbjct: 115 NLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEV-AVFEG-----DAEV 168
Query: 234 ASH---MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290
A + D + FTGS VG+ VM AAA +L V+LELGGKSP ++ + D+ AA
Sbjct: 169 AQALLELPFDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKK 227
Query: 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQ-- 345
G N G+ C+A V+V E + D F VE KA + G D A + P
Sbjct: 228 IAWGKFLNAGQTCIAPDYVFVHESVKDAF----VEHLKAEIEKFYGK--DAARKASPDLA 281
Query: 346 --VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 403
V+ + FDR+ ++ +GA + GG+ YI PT+ TNVT DM I + EIFG
Sbjct: 282 RIVNDRHFDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNVTPDMKIMQEEIFG 340
Query: 404 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FD 461
PV+ ++ ++ ++E I+ N LA + +KD N V +G + +N +
Sbjct: 341 PVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLN 400
Query: 462 SDCPYGGYKMSGFGR 476
+ P+GG SG G
Sbjct: 401 PNLPFGGVNNSGIGS 415
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 203 bits (520), Expect = 3e-60
Identities = 131/434 (30%), Positives = 206/434 (47%), Gaps = 36/434 (8%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHS 116
+++D R F G R + + ++++ E A++EAL D G+
Sbjct: 5 DEIDSIHSRLRATFRSGK--TKDLEYRLWQLKQLYWAVKDNEE--AIVEALKKDLGRPPF 60
Query: 117 WAKMGDIPGAANTLRYYAGAADK-IHGEVLKMSRALQGYTL------REPIGVVGHIIPW 169
+ ++ G N + + K E K+ + +EP+GVV I PW
Sbjct: 61 ETLLTEVSGVKNDILHMLKNLKKWAKDE--KVKDGPLAFMFGKPRIRKEPLGVVLIIGPW 118
Query: 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA 229
N+P + + A+AAGCT+++KP+E TP A A L + VV G P
Sbjct: 119 NYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP-KYLDPDAFQVVQGGVPET 177
Query: 230 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD 289
A + D K+ +TGS VGR + +AAA +L PV+LELGGKSP+++ + D+ AA
Sbjct: 178 TALLEQKFD--KIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAK 234
Query: 290 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ---- 345
L G N G+ICVA V V +YDEF VE+ K + D F P
Sbjct: 235 RILWGKFGNAGQICVAPDYVLVDPSVYDEF----VEELKKVL--DEFYPGGANASPDYTR 288
Query: 346 -VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 404
V+ + F+R+ S ++ K + ++ GG+ +I PTI ++V+ D + E+FGP
Sbjct: 289 IVNPRHFNRLKSLLDTTKGK---VVIGGEMDEAT-RFIPPTIVSDVSWDDSLMSEELFGP 344
Query: 405 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-CYFAFDSD 463
V+ ++K ++EAIK N+ LA I T D + + + R+G + IN D
Sbjct: 345 VLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVD 404
Query: 464 -CPYGGYKMSGFGR 476
P+GG SG+G
Sbjct: 405 NAPFGGVGDSGYGA 418
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 211 bits (539), Expect = 2e-59
Identities = 145/442 (32%), Positives = 218/442 (49%), Gaps = 46/442 (10%)
Query: 32 DSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIML 90
V G T ++P + + + E EDV+ A+ AA+ AF W AER I+
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILE 619
Query: 91 KFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
+ ADL+E H L L +AGK + A + ++ A + LRYYA A R
Sbjct: 620 RAADLMEAHMPELFALAVREAGK--TLANAIAEVREAVDFLRYYAAQA-----------R 666
Query: 150 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 209
L +P+G V I PWNFP +F +++ AL AG T++ KPAEQTPLIA L
Sbjct: 667 RLLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLL 726
Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL- 268
AGVP L ++PG G T GAA+ + I V FTGST+V R + + A + PV L
Sbjct: 727 HEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLI 786
Query: 269 -ELGGKSPLLI---------FDDVDVNTAADMALLGILFNKGEICVASSRV-YVQEGIYD 317
E GG++ +++ DV + +A D A G+ C A RV +QE + D
Sbjct: 787 AETGGQNAMIVDSSALPEQVVADV-IASAFDSA--------GQRCSA-LRVLCLQEDVAD 836
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG- 376
L +GDP+ + GP +D + I ++IE + G + P
Sbjct: 837 RVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAET 896
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMT 434
+KG ++ PT+ + + + E+FGPV+ +++FK ++ I N T YGL G+ +
Sbjct: 897 EKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHS 954
Query: 435 K-DLNVANTVSRSIRAGIIWIN 455
+ D +A+ SR IRAG I++N
Sbjct: 955 RIDETIAHVTSR-IRAGNIYVN 975
|
Length = 1208 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 4e-59
Identities = 143/480 (29%), Positives = 234/480 (48%), Gaps = 20/480 (4%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
K + +GE+ S SGK+ +P T + ++ +E+V+ A+++A+ A W +
Sbjct: 17 KYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAA--QKAWAKTPL 74
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R ++ K A +++EH +A + K A ++ + + + Y A +I G
Sbjct: 75 WKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILG 133
Query: 143 E-VLKMSRALQG-----YTL--REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
E +S + G Y L + P+GVV I P+N+P + K++PAL AG +++KP
Sbjct: 134 EGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKP 193
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
Q + AL+ H LAG P G+++ V G G G + H ++ +SFTG D G +
Sbjct: 194 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAI 252
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ A + P+ +ELGGK ++ +D D++ AA + G G+ C A V V E
Sbjct: 253 SKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMES 309
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374
+ D +K+ K VG P D P V + + I + K +GAT K
Sbjct: 310 VADALVEKVNAKVAKLTVGPPEDDC-DITPVVSESSANFIEGLVMDAKEKGATFCQEWK- 367
Query: 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434
++G I P + NV DM IA E FGPV+ +++ +VEE I N + +GL + T
Sbjct: 368 --REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 425
Query: 435 KDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+D+N A +S ++ G + IN A D P+ G K SG G S++ +VKS V
Sbjct: 426 RDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTV 485
|
Length = 496 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 204 bits (521), Expect = 6e-58
Identities = 141/437 (32%), Positives = 211/437 (48%), Gaps = 41/437 (9%)
Query: 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114
E + DV+ A++AA A W AER I+ + ADL+E L L +AGK
Sbjct: 146 EATEADVEQALEAAVAAAPI--WSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKT 203
Query: 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTT 174
S A + ++ A + LRYYAG A R G P+G V I PWNFP
Sbjct: 204 LSNA-IAEVREAVDFLRYYAGQA-----------RDTFGNLTHRPLGPVVCISPWNFPLA 251
Query: 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA 234
+F +++ ALAAG +++ KPAEQTPLIA L AGVP GVL ++PG G T GAA+
Sbjct: 252 IFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALT 311
Query: 235 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLI---------FDDVD 283
+ + V FTGST+V R + + A +P+ L E GG++ +++ DV
Sbjct: 312 ADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADV- 370
Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
+ +A D A G+ C A + +QE + D L VG+P G
Sbjct: 371 LASAFDSA--------GQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVG 422
Query: 344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIF 402
P +D + I +I+ + +G + P +KG ++ PT+ D L + E+F
Sbjct: 423 PVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDEL--QREVF 480
Query: 403 GPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN--CYF 458
GPV+ ++++K ++E I N T YGL G+ T+ V+ AG +++N
Sbjct: 481 GPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVG 540
Query: 459 AFDSDCPYGGYKMSGFG 475
A P+GG +SG G
Sbjct: 541 AVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 9e-57
Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 45/359 (12%)
Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LI 201
Y EP GVV I PWN+P F + ++P A+AAG T ++KP+E TP +I
Sbjct: 94 SYIYYEPYGVVLIIAPWNYP---FQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
F + + VV G + D + FTGS VG+ VM+AAA
Sbjct: 151 EETF---------DEEYVAVVEGGVEENQELLDQKFD--YIFFTGSVRVGKIVMEAAAK- 198
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
+L PV+LELGGKSP ++ +D ++ AA + G N G+ CVA V V E + ++F K
Sbjct: 199 HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK 258
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
+L E+ K + DP + P +++K FDR+ +++GK ++ GG +
Sbjct: 259 ELKEEIKKFYGEDP-----LESPDYGRIINEKHFDRLAGLLDNGK-----IVFGGN-TDR 307
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
+ YIEPTI NVT D + + EIFGP++ ++ + T++EAI+ + LA + ++D
Sbjct: 308 ETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDK 367
Query: 438 NVANTVSRSIRAGIIWIN---CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
V V ++ G IN + A + P+GG SG G G S + KS++
Sbjct: 368 KVEKKVLENLSFGGGCINDTIMHLA-NPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSIL 425
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 195 bits (496), Expect = 3e-56
Identities = 135/450 (30%), Positives = 207/450 (46%), Gaps = 35/450 (7%)
Query: 43 DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102
D R + + ++ + V A+ +A+QAF W ER + + ADL+E H
Sbjct: 60 DRR--DIVGQVFHANLAHVQAAIDSAQQAF--PTWNATPAKERAAKLDRLADLLELHMPE 115
Query: 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGV 162
L L +AGK A + ++ A + RYYA + GE E GV
Sbjct: 116 LMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLGE-----------FSVESRGV 163
Query: 163 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 222
I PWNFP +F ++S ALAAG T+I KPAEQT LIA L + AG P G + ++
Sbjct: 164 FVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLL 223
Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLIFD 280
PG G GAA+ S I V+FTGST+V + + Q A PV L E GG++ ++
Sbjct: 224 PGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMI--- 280
Query: 281 DVDVNTAADMALLGIL---FNK-GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
VD + + +L F+ G+ C A + VQE + D + + VG P
Sbjct: 281 -VDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH 339
Query: 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGAT---LLTGGKPIGKKGYYIEPTIFTNVTED 393
GP +D + +L++IEH + L + G ++ PT+F +D
Sbjct: 340 LLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDD 397
Query: 394 MLIAKNEIFGPVMALMKFKTVE--EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 451
+ E+FGPV+ ++++K E + + N T YGL G+ ++ + + R G
Sbjct: 398 IAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGN 457
Query: 452 IWIN--CYFAFDSDCPYGGYKMSGFGRDCG 479
++N A P+GG +SG G G
Sbjct: 458 CYVNRNQVGAVVGVQPFGGQGLSGTGPKAG 487
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 3e-50
Identities = 134/491 (27%), Positives = 223/491 (45%), Gaps = 54/491 (10%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
++ GE+ +G +++P + IA + E ED + ++A +A W + +
Sbjct: 24 YVGGEW--RANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPK 79
Query: 85 RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ + D + + L L +L+ GK+ + +G++ + + G + +++G +
Sbjct: 80 RGEIVRQIGDALRAKLDYLGRLVSLEMGKILA-EGIGEVQEIIDMCDFAVGLSRQLNGSI 138
Query: 145 LKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
+ R + + E P+G+VG I +NFP + AL G ++ K A TPLI
Sbjct: 139 IPSERP--NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
Query: 202 ALYFAHLAKLAGV------PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
+ L +A V P + G G G AIA I VSFTGS+ VG ++
Sbjct: 197 TIAMTKL--VAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVG-LMV 252
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
Q + LEL G + +++ DD D+ A L + G+ C R+ + E I
Sbjct: 253 QQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESI 312
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YD+ ++L+ K +GDP + GP + IE K +G +LTGG I
Sbjct: 313 YDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI 372
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
+G +++PTI ++ D + K E+FGPV+ +MKFKT+EEAI+ N+ GL++ I T+
Sbjct: 373 ESEGNFVQPTI-VEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTR 431
Query: 436 DLNVANTVSRSIRAGII--WINCYFAFDSDC----------------PYGGYKMSGFGRD 477
I WI SDC +GG K +G GR+
Sbjct: 432 ------------NPETIFKWIG---PLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
Query: 478 CGLESLHNYLQ 488
G +S Y++
Sbjct: 477 AGSDSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 2e-49
Identities = 133/502 (26%), Positives = 213/502 (42%), Gaps = 92/502 (18%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I G+ V + G T + + P +A D V+ A++AA +A W R
Sbjct: 35 LVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEA--RKEWARMPF 90
Query: 83 AERRGIMLKFADLIEE-------------------HAEVLAVLEALD--------AGKLH 115
+R I LK ADL+ AE+ A E +D A +L+
Sbjct: 91 EDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELY 150
Query: 116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF---- 171
+ + G N L Y R L+G+ V + P+NF
Sbjct: 151 AQQPLSSPAGVWNRLEY----------------RPLEGF--------VYAVSPFNFTAIG 186
Query: 172 ---PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT 228
PAL G ++ KP++ L + + AG+P GV+N VPG GP
Sbjct: 187 GNLAGA-------PALM-GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPV 238
Query: 229 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPLLIFDDVD 283
G + + + + FTGST + + + + + E GGK+ L+ D
Sbjct: 239 VGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSAD 298
Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
V++ + G +G+ C A+SR YV E ++ E +++L+E+ K +GDP D + G
Sbjct: 299 VDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMG 358
Query: 344 PQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIF--TNVTEDMLIAKNE 400
+D+K FDRI YI+H K + A ++ GGK GY++EPT+ T+ ++ E
Sbjct: 359 AVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLM--TEE 416
Query: 401 IFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIW 453
IFGPV+ + F+ E + + + Y L I +D + ++R AG +
Sbjct: 417 IFGPVLTVYVYPDSDFEETLELVDTT--SPYALTGAIFAQDRKAIREATDALRNAAGNFY 474
Query: 454 IN--CYFAFDSDCPYGGYKMSG 473
IN A P+GG + SG
Sbjct: 475 INDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 4e-48
Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 11/343 (3%)
Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
Y + EP+GVV I WN+P + + ++ A+AAG T+++KP+E +P + A L
Sbjct: 103 SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLL-TK 161
Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
+ + V+ G G + D + FTGS VG+ VMQAAA NL P +LELGG
Sbjct: 162 YLDPSYVRVIEG-GVEVTTELLKE-PFDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGG 218
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
KSP+++ ++ AA G N G+ CVA V V I D+F + L E K +
Sbjct: 219 KSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEF-F 277
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
G+ + V++ R+ I K G ++ GG+ + + Y+ PTI N
Sbjct: 278 GEDPKKSEDYSRIVNEFHTKRLAELI---KDHGGKVVYGGE-VDIENKYVAPTIIVNPDL 333
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 452
D + + EIFGP++ ++ ++ ++E ++ N+ LA +D V + +G +
Sbjct: 334 DSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAV 393
Query: 453 WIN-CYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
IN C F + + P+GG SG G G + K V+
Sbjct: 394 VINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 1e-45
Identities = 137/470 (29%), Positives = 213/470 (45%), Gaps = 27/470 (5%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L I GE V + SG+ + P +A+ +E + AV+AA A W
Sbjct: 34 LVIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKE--WSLLPF 90
Query: 83 AERRGIMLKFADLI--EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
+R I LK ADL+ AE+LA L K A++ + + R+ A A ++
Sbjct: 91 YDRAAIFLKAADLLSGPYRAEILAAT-MLGQSKTVYQAEIDAVAELIDFFRFNAKYAREL 149
Query: 141 HGEVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ + + T P+ G V I P+NF + +PAL G T+I KP++
Sbjct: 150 YEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAM 208
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
L + + AG+P GV+N VPG GP + + D+ + FTGST + + + A
Sbjct: 209 LSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVA 268
Query: 260 TS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ N + E GGK ++ DV + G +G+ C A SR+YV
Sbjct: 269 QNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHS 328
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR--EGATLLTGG 372
++ F+ +L+ + VGDP D G +D+K F +I+ YIEH K T+L GG
Sbjct: 329 LWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGG 388
Query: 373 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYG 427
K GY++EPT+ + + K EIFGPV+ + K+K + + + S T YG
Sbjct: 389 KYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDST--TSYG 446
Query: 428 LAAGIMTKDLNVANTVSRSIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 473
L + KD + + +R AG +IN A P+GG + SG
Sbjct: 447 LTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 5e-44
Identities = 108/330 (32%), Positives = 158/330 (47%), Gaps = 26/330 (7%)
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPLIALYFAHLAKLAG- 213
EP+GVV I WNFP F + + P A+AAG +++KP+E P + A LAKL
Sbjct: 100 EPLGVVLVISAWNFP---FLLSLEPVIGAIAAGNAVVLKPSELAPATS---ALLAKLIPE 153
Query: 214 -VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
+ + V+ G G A+ DK+ FTGS VGR +M AAA +L PV+LELGG
Sbjct: 154 YLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIM-AAAAKHLTPVTLELGG 210
Query: 273 KSPLLIFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
K P+++ VD+ A G N G+ C+A V V+E L + +
Sbjct: 211 KCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFF 270
Query: 332 VGDPF--DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 389
+P R V+ F R LS + ++ GG+ +K YIEPTI +
Sbjct: 271 GENPKESKDLSRI---VNSHHFQR-LSRLLDDPSVADKIVHGGE-RDEKNLYIEPTILLD 325
Query: 390 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 449
D I EIFGP++ ++ K +EE+I+ N+ LAA + TK+ + + +
Sbjct: 326 PPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSS 385
Query: 450 GIIWIN---CYFAFDSDCPYGGYKMSGFGR 476
G + N +A D P+GG SGFG
Sbjct: 386 GGVTFNDTVVQYAID-TLPFGGVGESGFGA 414
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 8e-44
Identities = 125/437 (28%), Positives = 207/437 (47%), Gaps = 55/437 (12%)
Query: 64 AVKAARQAFDHGPWPRFSGAERRGIMLK-FADLIEEHAEVLAVLEAL--DAGKLHSWAKM 120
AV+ AR+AF G + E R L+ ++EE+ + ++EAL D K A +
Sbjct: 3 AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENED--EIVEALAKDLRKPKFEAVL 57
Query: 121 GDIPGAANTLRYYAGAADKIH--GEVLKMSRALQG-----YTLREPIGVVGHIIPWNFPT 173
+I N ++Y A + + + + L Y +EP+GVV I WN+P
Sbjct: 58 SEILLVKNEIKY---AISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPL 114
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTP----LIA-LYFAHLAK------LAGVPDGVLNVV 222
+ + + A+AAG +++KP+E +P L+A L +L K L GV + +
Sbjct: 115 QLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLK 174
Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 282
F D + +TGST VG+ VMQAAA +L PV+LELGGKSP +
Sbjct: 175 QRF--------------DYIFYTGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSC 219
Query: 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342
D++ AA G N G+ C+A V + ++F + L + K + DP +
Sbjct: 220 DIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESP-DY 278
Query: 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 402
G ++ + F R+ + GK + GG+ +K YI PT+ T+V + + EIF
Sbjct: 279 GRIINDRHFQRLKKLLSGGK-----VAIGGQ-TDEKERYIAPTVLTDVKPSDPVMQEEIF 332
Query: 403 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN---CYFA 459
GP++ ++ ++EAI+ N+ LA + + + V N + + +G + +N ++
Sbjct: 333 GPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYT 392
Query: 460 FDSDCPYGGYKMSGFGR 476
DS P+GG SG G
Sbjct: 393 LDS-LPFGGVGNSGMGA 408
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 2e-40
Identities = 135/436 (30%), Positives = 215/436 (49%), Gaps = 54/436 (12%)
Query: 43 DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAE 101
DPR + + + E +V+ A+++A A P W AER I+ + ADL+E +
Sbjct: 668 DPR--DIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILERAADLMEAQMQ 722
Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGEVLKMSRALQGYTLREPI 160
L L +AGK S A + ++ A + LRYYAG D + T R P+
Sbjct: 723 TLMGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDFDND-----------THR-PL 769
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
G V I PWNFP +F +V+ ALAAG +++ KPAEQTPLIA + AGVP GV+
Sbjct: 770 GPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQ 829
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT---SNLKPVSL--ELGGKSP 275
++PG G T GAA+ + + V FTGST+V R + + A +P+ L E GG++
Sbjct: 830 LLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNA 889
Query: 276 LLIFD----------DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 325
+I D DV + +A D A G+ C A + +Q+ + D K L
Sbjct: 890 -MIVDSSALTEQVVADV-LASAFDSA--------GQRCSALRVLCLQDDVADRTLKMLRG 939
Query: 326 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYI 382
+G+P + GP +D + I +I+ + +G + + + G ++
Sbjct: 940 AMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFV 999
Query: 383 EPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTK-DLNV 439
PT+ + D L K E+FGPV+ ++++ ++E I+ N + YGL G+ T+ D +
Sbjct: 1000 PPTLIELDSFDEL--KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETI 1057
Query: 440 ANTVSRSIRAGIIWIN 455
A V+ S G +++N
Sbjct: 1058 AQ-VTGSAHVGNLYVN 1072
|
Length = 1318 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 1e-37
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 385 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 444
T+ +V DM IA+ EIFGPV+ +++FK EEAI AN+T YGL AG+ T+DLN A V+
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 445 RSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+RAG ++IN P+GG K SG GR+ G L Y + K+VV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 3e-36
Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 35/354 (9%)
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP-- 215
EP+GVV WNFP + + A+AAG +++KP+E P + + A A +P
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA-----ANIPKY 161
Query: 216 --DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+ V+ G GP G + H DK+ FTGS VGR +M AAA +L PV+LELGGK
Sbjct: 162 LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGK 218
Query: 274 SPLLIFDDVDVNTAADMALLGILFNK-----GEICVASSRVYVQEG---IYDEFEKKLVE 325
P I D + + +A+ I+ K G+ C+A V V+E I E K ++
Sbjct: 219 CP-CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIK 277
Query: 326 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 385
K + A ++KK F R+ + ++ R A+++ GG I +K +IEPT
Sbjct: 278 KFFGENPRESKSMA----RILNKKHFQRLSNLLKD-PRVAASIVHGGS-IDEKKLFIEPT 331
Query: 386 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN-----VA 440
I N D I EIFGP++ ++ K +E++I N+ LA T + ++
Sbjct: 332 ILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILS 391
Query: 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
T S S+ I +A DS P+GG SGFGR G S + K+V+
Sbjct: 392 ETSSGSVTFNDAIIQ--YACDS-LPFGGVGESGFGRYHGKYSFDTFSHEKAVLR 442
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 2e-33
Identities = 116/450 (25%), Positives = 187/450 (41%), Gaps = 59/450 (13%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-----GPWPR 79
++ G + SG DP TGE + R+ +DLA AF G R
Sbjct: 8 YVAGRWQAG-SGAGTPLFDPVTGEELVRV---SATGLDLA-----AAFAFAREQGGAALR 58
Query: 80 -FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
+ A+R ++ +++ + + + ++G + + + DI G TL YYA
Sbjct: 59 ALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGA 117
Query: 139 KI-------HGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ GE +++ + A QG + P GV I +NFP + K +PAL AG
Sbjct: 118 ALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGV 177
Query: 189 TMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMD-IDKVSFTG 246
+IVKPA T + AG+ P G L+VV G + A + H+ D VSFTG
Sbjct: 178 PVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFTG 233
Query: 247 STDVGRQ------VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL---- 296
S + V+Q + N++ SL S LL D + A D+ + ++
Sbjct: 234 SAETAAVLRSHPAVVQRSVRVNVEADSL----NSALLGPDAAPGSEAFDLFVKEVVREMT 289
Query: 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 356
G+ C A R++V E +YD + L + VG+P + VR GP V + Q + +
Sbjct: 290 VKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRA 349
Query: 357 YIEHGKREGATLLTGG---KPIGK---KGYYIEPTIFTNVTEDMLIAK----NEIFGPVM 406
+ R A +L G + + PT+ D A E+FGPV
Sbjct: 350 GLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLL--GASDPDAATAVHDVEVFGPVA 406
Query: 407 ALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
L+ ++ A+ A + L A + + D
Sbjct: 407 TLLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 1e-29
Identities = 126/468 (26%), Positives = 187/468 (39%), Gaps = 80/468 (17%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
++ G++ +G D TGE +AR++ + D AV AR+ GP R
Sbjct: 4 YVAGQWHAG-TGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALTFH 59
Query: 85 RRGIMLK-FADLIEEHAEVLAVLEALDAG-KLHSWAKMGDIPGAANTLRYYAGAADK--- 139
R MLK A + E E L L A + SW DI G TL YA +
Sbjct: 60 ERAAMLKALAKYLMERKEDLYALSAATGATRRDSWI---DIDGGIGTLFAYASLGRRELP 116
Query: 140 -----IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
+ G+V +S+ G + P GV HI +NFP K +PAL AG +I
Sbjct: 117 NAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVI 176
Query: 192 VKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTD 249
VKPA T + +G+ P+G L ++ G + + H+ D V+FTGS
Sbjct: 177 VKPATATAYLTEAVVKDIVESGLLPEGALQLICG----SVGDLLDHLGEQDVVAFTGSAA 232
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD---MALLGI----------L 296
++ P ++ + N AD A+LG L
Sbjct: 233 TAAKL-----------------RAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDL 275
Query: 297 FNK----------GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
F K G+ C A R +V E D + L + VVGDP VR GP V
Sbjct: 276 FVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLV 335
Query: 347 DKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVTEDMLIAKN 399
++Q + + + + A ++ GG +KG + PT+ + +D A
Sbjct: 336 SREQREDVRAAVAT-LLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLL--LCDDPDAATA 392
Query: 400 ----EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 443
E FGPV LM + ++ EAI+ A R L A ++T D A +
Sbjct: 393 VHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFAREL 440
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 4e-26
Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 20/344 (5%)
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
EP+GVV I WN+P + V A++AG +++KP+E P + A L +
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSS- 169
Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
+ VV G A + D K+ +TGS+ +GR +M AAA +L PV LELGGKSP++
Sbjct: 170 AVRVVEGAVTETTALLEQKWD--KIFYTGSSKIGRVIM-AAAAKHLTPVVLELGGKSPVV 226
Query: 278 IFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAK----AWVV 332
+ D D+ + G N G+ C++ + + E+ K+++ K +
Sbjct: 227 VDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTK----EYAPKVIDAMKKELETFYG 282
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 392
+P + + V+ FDR LS + K ++ GG+ ++ I PTI +V
Sbjct: 283 KNPME-SKDMSRIVNSTHFDR-LSKLLDEKEVSDKIVYGGEK-DRENLKIAPTILLDVPL 339
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 452
D LI EIFGP++ ++ +EE+ + LAA + T + + + ++ AG I
Sbjct: 340 DSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGI 399
Query: 453 WIN---CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+N + A + P+GG SG G G S + K+V+
Sbjct: 400 VVNDIAVHLALHT-LPFGGVGESGMGAYHGKFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 95/453 (20%), Positives = 161/453 (35%), Gaps = 54/453 (11%)
Query: 73 DHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132
R + +R + + + + +A L GK W +I G LR
Sbjct: 11 STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGK--GWMFAENICGDQVQLRA 68
Query: 133 YA--GAADKIH---GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
A + +I G L Q + R P G V I +NFP + ++++ ALA G
Sbjct: 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMG 128
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
+IVKP ++ L AG +P + ++ G G T A+ H + V FTG
Sbjct: 129 NPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLHPNPKMVLFTG 187
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDV------NTAADMALLGILFNKG 300
S+ V ++ A + + LEL G + ++ D DM G
Sbjct: 188 SSRVAEKLALDAKQA---RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTA-----CSG 239
Query: 301 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ---VDKKQFDRILSY 357
+ C A S ++V E + + LVEK KA R+ + + Q L+
Sbjct: 240 QKCTAQSMLFVPE---NWSKTPLVEKLKA--------LLARRKLEDLLLGPVQTFTTLAM 288
Query: 358 IEHGKREGATLLTGGKPIGKK-------GYYIEPTIFTNVTEDMLIAK---NEIFGPVMA 407
I H + ++L K G + +F + E + + EIFGP
Sbjct: 289 IAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAI 348
Query: 408 LMKFKTVEEAIKSANNTRY--GLAAGIM-TKDLNVANTVSRSIRAGIIWINCYF---AFD 461
++++K + A+ R L A I + + + AG +
Sbjct: 349 VVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAP 408
Query: 462 SDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVV 493
+ GG G G E++ + +
Sbjct: 409 NQNHGGGPAADPRGAGIGGPEAIKLVWRCHAEQ 441
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 4e-25
Identities = 112/439 (25%), Positives = 172/439 (39%), Gaps = 34/439 (7%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
+++GE+ + G+ D TGE +AR+ + DV AV AR+ GP R
Sbjct: 4 YLSGEWR-TGQGEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALTFH 59
Query: 85 RRGIMLK-FADLIEEHAEVLAVLEA-LDAGKLHSWAKMGDIPGAANTLRYYAGAADK--- 139
R MLK A + E E L L A A + +W DI G TL Y+ +
Sbjct: 60 ERARMLKALAQYLSERKEALYALAATTGATRRDNWV---DIDGGIGTLFTYSSLGRRELP 116
Query: 140 -----IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
E +S+ + QG + P GV I +NFP K +PA AG +
Sbjct: 117 DANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTL 176
Query: 192 VKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTD 249
KPA T +A +G +P+G L ++ G +AG + H+D D V+FTGS
Sbjct: 177 AKPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGD-LLDHLDHRDVVAFTGSAA 232
Query: 250 VGRQV-MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK-----GEIC 303
++ + E + ++ +D + + + G+ C
Sbjct: 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKC 292
Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363
A RV V + + + K L + V+GDP + V GP V +Q + + +
Sbjct: 293 TAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLA 352
Query: 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDM-LIAKNEIFGPVMALMKFKTVEEAIKSAN 422
GA + GG P G + PT+ + E FGPV + EA + A
Sbjct: 353 AGAEVRLGG-PGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAA 411
Query: 423 NTRYGLAAGIMTKDLNVAN 441
L A + T D A
Sbjct: 412 RGGGSLVATLATSDPEEAR 430
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 99 bits (250), Expect = 4e-22
Identities = 135/489 (27%), Positives = 190/489 (38%), Gaps = 114/489 (23%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-----GPWPR 79
++ G + G+ D TGE +AR+ E +D A A + GP R
Sbjct: 8 YVAGRWQTG-QGEGRPLHDAVTGEPVARV---SSEGLDFA-----AALAYAREVGGPALR 58
Query: 80 FSGAERRGIMLK-FADLIEEHAEVLAVLEALD-AGKLHSWAKMGDIPGAANTLRYYAGAA 137
R MLK A + E E L L A A + SW DI G TL YA
Sbjct: 59 ALTFHERAAMLKALAKYLLERKEELYALSAQTGATRRDSWI---DIEGGIGTLFTYASKG 115
Query: 138 ------DKIH--GEVLKMSRALQG-------YTLREPIGVVGHIIPWNFPTTMFFMKVSP 182
D + GEV +S+ G T E GV HI +NFP K++P
Sbjct: 116 RRELPNDTVLVEGEVEPLSK--GGTFAGRHILTPLE--GVAVHINAFNFPVWGMLEKLAP 171
Query: 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLA--------GVPDGVLNVVPGFGPTAGAAIA 234
A AG IVKPA T A+L + +P+G L ++ G +AG +
Sbjct: 172 AFLAGVPAIVKPATAT-------AYLTEAVVRLIVESGLLPEGALQLICG---SAG-DLL 220
Query: 235 SHMDI-DKVSFTGSTDVGRQVMQAAATSN-LKPVSLELGGKSPLLIFDDVDVNTAAD--- 289
H+D D V+FTGS AAT+ L+ P ++ + V AD
Sbjct: 221 DHLDGQDVVTFTGS----------AATAQKLR--------AHPNVVANSVPFTAEADSLN 262
Query: 290 MALLGI----------LFNK----------GEICVASSRVYVQEGIYDEFEKKLVEKAKA 329
A+LG LF K G+ C A R V + D + L +
Sbjct: 263 AAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAK 322
Query: 330 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIG---KKGYYI 382
VVGDP VR G +Q + + + A ++ GG +G +KG +
Sbjct: 323 VVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFF 381
Query: 383 EPTIFTNVTEDMLIAKN----EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
PT+ +D L A E FGPV LM + ++EAI+ A + L A ++T D
Sbjct: 382 PPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPE 439
Query: 439 VANTVSRSI 447
VA +
Sbjct: 440 VARELVLGA 448
|
Length = 675 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 9e-19
Identities = 102/395 (25%), Positives = 147/395 (37%), Gaps = 56/395 (14%)
Query: 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL---AVLE-ALDAGKLHS 116
VD A AA AF+ + S A R + AD IE + L A E L +L
Sbjct: 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARL-- 56
Query: 117 WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYT------LRE---PIGVVGH 165
G++ LR +A + G L A LR P+G V
Sbjct: 57 ---QGELGRTTGQLRLFADLVRE--GSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAV 111
Query: 166 IIPWNFPTTMFFMKVS-----PALAAGCTMIVK--PA--EQTPLIALYFAHLAKLAGVPD 216
NFP V+ ALAAGC ++VK PA + L+A + G+P
Sbjct: 112 FGASNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPA 168
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL-KPVSLELGGKSP 275
GV +++ G G G A+ H I V FTGS GR + AAA P ELG +P
Sbjct: 169 GVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228
Query: 276 LLIFDDVDVNTAADMA--LLG-ILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWV 331
+ I +A +G + G+ C V V G D F L E A
Sbjct: 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAP 288
Query: 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 391
P + + + + + + + G +L GG + G PT+F V
Sbjct: 289 AQTMLTPGIAEAYR---QGVEALAA------APGVRVLAGG-AAAEGGNQAAPTLFK-VD 337
Query: 392 EDMLIAK----NEIFGPVMALMKFKTVEEAIKSAN 422
+A E+FGP ++++ E + A
Sbjct: 338 AAAFLADPALQEEVFGPASLVVRYDDAAELLAVAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 108/462 (23%), Positives = 186/462 (40%), Gaps = 54/462 (11%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
+ G++ + +DP G+ + + D+++++ V + RQ G E
Sbjct: 2 LVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59
Query: 85 RR----GIMLKFADLIE--EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
R + + A + E + A L A K + A G++ L +AG
Sbjct: 60 RYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQV 118
Query: 139 KIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
+ + QG R P G V I P+NFP + +++ AL G ++K
Sbjct: 119 RFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
+ ++ F L L G+P ++++ GPT I + FTGS+ V ++
Sbjct: 179 SKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMN-KILLEANPRMTLFTGSSKVAERL- 236
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVY---- 310
A + K V LE G ++ DV DV+ A G+ C A S ++
Sbjct: 237 --ALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHEN 293
Query: 311 -VQEGIYDEFEKKLVEKAKA--WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367
VQ GI D+ K L E+ K +G P + + D++L+ GA
Sbjct: 294 WVQAGILDKL-KALAEQRKLEDLTIG----PVLTWTTERILDHVDKLLAI------PGAK 342
Query: 368 LLTGGKPI---GKKGYY--IEPTIFTNVTEDMLIAKN------EIFGPVMALMKFKTVEE 416
+L GGKP+ Y EPT E++ I +N E+FGP + ++K +
Sbjct: 343 VLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQL 402
Query: 417 --AIKSANNTRYGLAAGIMTKDLN-----VANTVSRSIRAGI 451
+++ L A +++ D+ +ANTV+ + AGI
Sbjct: 403 PLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGI 444
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 60/289 (20%), Positives = 93/289 (32%), Gaps = 35/289 (12%)
Query: 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS------WAKMGDIPGAAN----T 129
+R I+ A+ + + + LA + G A MG T
Sbjct: 13 NHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDT 72
Query: 130 LRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
R + I +L + + Y PIGV HI+P P + + +A
Sbjct: 73 ERGITASVGHIQDVLLPDN--GETYVRAFPIGVTMHILPSTNPLSGITSALR-GIATRNQ 129
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFT 245
I +P P L A ++ + P +A SH ID + T
Sbjct: 130 CIFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVAT 188
Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
G D V A S PV G SP+++ + D A+ F+ C +
Sbjct: 189 GGRDA---VDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACAS 244
Query: 306 SSRVYVQEGIYD----EFEKKLVE---------KAKAWVVGDPFDPAVR 341
+YV + + D EF+ KLV K + FD
Sbjct: 245 EQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEAL 293
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 97/415 (23%), Positives = 163/415 (39%), Gaps = 65/415 (15%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
VD AV AA+ A + + + A+R I+ + + +AE LA + + G
Sbjct: 4 ATVDDAVAAAKAAQ--KQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETG------ 55
Query: 119 KMGDIPG--AANTLRYYAGAADKIHG-EVLKMSRALQG---YTLRE--PIGVVGHIIPWN 170
MG + A N L AA+K G E L + A G TL E P GV+G I P
Sbjct: 56 -MGRVEDKIAKNHL-----AAEKTPGTEDLTTT-AWSGDNGLTLVEYAPFGVIGAITPST 108
Query: 171 FPT-TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGF 225
PT T+ +S LAAG ++ P ++ Y L AG PD ++ V
Sbjct: 109 NPTETIINNSIS-MLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEP 167
Query: 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285
+ +H DI+ + TG V + + + K G P+++ + D+
Sbjct: 168 TIETTNELMAHPDINLLVVTGGPAVVKAALSSG-----KKAIGAGAGNPPVVVDETADIE 222
Query: 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
AA + G F+ C+A V + + D + ++ A+V+ D Q
Sbjct: 223 KAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAM-QRNGAYVLNDE---------Q 272
Query: 346 VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI-----------EPTIFTNVTEDM 394
++ +L +GAT K +GK I I +D
Sbjct: 273 AEQLLEVVLL------TNKGATPNK--KWVGKDASKILKAAGIEVPADIRLIIVETDKDH 324
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNVANTVSRSI 447
E P++ +++ K +EAI+ A +G A I +K++ ++R++
Sbjct: 325 PFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAM 379
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 63/325 (19%), Positives = 115/325 (35%), Gaps = 50/325 (15%)
Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAK 210
+ EPIGVV I P PT+ K +L ++I P + T A A
Sbjct: 91 IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150
Query: 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 270
AG P+ ++ + + I + TG G V++AA +S KP
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVKAAYSSG-KPAIGVG 205
Query: 271 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330
G +P++I + D+ A + F+ G IC + V V + +YDE +L E A+
Sbjct: 206 AGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEV-MRLFEGQGAY 264
Query: 331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 390
+ ++ + Q IL + +G+ Y I V
Sbjct: 265 KL---------TAEELQQVQ-PVILKNGD----------VNRDIVGQDAYKIAAAAGLKV 304
Query: 391 TEDMLI-------------AKNEIFGPVMALMKFKTVEEAIKSA----NNTRYGLAAGIM 433
++ I +E PV+A+ + +A A G + +
Sbjct: 305 PQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMY 364
Query: 434 TKDLNVANTVSR---SIRAGIIWIN 455
+ ++ +++ +++ N
Sbjct: 365 SDNIKAIENMNQFANAMKTSRFVKN 389
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 1e-06
Identities = 82/327 (25%), Positives = 131/327 (40%), Gaps = 60/327 (18%)
Query: 158 EPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLIALYFAH-LAKL 211
EP+GV+ +IP P T +F K AL +I P A++ + A A
Sbjct: 94 EPVGVIAALIPSTNPTSTAIF--KALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVA 151
Query: 212 AGVPDGVLNVVPGFGPT--AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 269
AG P+G++ + P+ + H D+D + TG M AA S+ KP
Sbjct: 152 AGAPEGLIQWIEE--PSIELTQELMKHPDVDLILATGG-----PGMVKAAYSSGKPA--- 201
Query: 270 LG---GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 326
+G G P I + D+ A +L F+ G IC + V V + IYDE +L ++
Sbjct: 202 IGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAEL-KR 260
Query: 327 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 386
A+ + + +K++ ++ L +G TL +GK I
Sbjct: 261 RGAYFLNEE-----------EKEKLEKALF------DDGGTL--NPDIVGKSAQKIAELA 301
Query: 387 FTNVTED--MLIAKNEIFG-----------PVMALMKFKTVEEAIKSAN-NTRYGLA--- 429
V ED +L+A+ G PV+A + + EEA++ A YG A
Sbjct: 302 GIEVPEDTKVLVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGGAGHT 361
Query: 430 AGIMTKDLNVANTVSRSIRAGIIWINC 456
A I + D V + + I +N
Sbjct: 362 AVIHSNDEEVIEEFALRMPVSRILVNT 388
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 98/393 (24%), Positives = 153/393 (38%), Gaps = 77/393 (19%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
VD AV AA+ A + + S A R+ I+ + + HAE LA L + G
Sbjct: 36 ASVDDAVAAAKVAQQR--YQQKSLAMRQRIIDAIREALLPHAEELAELAVEETG------ 87
Query: 119 KMGDIPG--AANTLRYYAGAADKIHG-EVLKMSRAL---QGYTLRE--PIGVVGHIIPWN 170
MG + A N AA+K G E L AL G TL E P GV+G + P
Sbjct: 88 -MGRVEDKIAKNVA-----AAEKTPGVEDLTTE-ALTGDNGLTLIEYAPFGVIGAVTPST 140
Query: 171 FPT-TMFFMKVSPALAAGCTMIVKP---AEQTPL--IALYFAHLAKLAGVPDGVLNVVPG 224
PT T+ +S LAAG +++ P A++ L I L + G P+ ++ V
Sbjct: 141 NPTETIINNAIS-MLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGG-PENLVVTVAE 198
Query: 225 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD-VD 283
+ H I + TG V + M+ S K + G +P ++ D+ D
Sbjct: 199 PTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIG--AGAGNPPVVVDETAD 252
Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
+ AA + G F+ C+A V V + + DE +L+EK A
Sbjct: 253 IEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADEL-MRLMEKNGAV------------- 298
Query: 344 PQVDKKQFDRILSYIEHGKREGATLLTGGKP----IGKKGYYI---------EPT--IFT 388
+ +Q +++ L GG +GK I + T +
Sbjct: 299 -LLTAEQAEKLQK---------VVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIV 348
Query: 389 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421
+ E+ PV+ +++ K V+EAI A
Sbjct: 349 ETDANHPFVVTELMMPVLPVVRVKDVDEAIALA 381
|
Length = 465 |
| >gnl|CDD|237515 PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 7e-04
Identities = 80/324 (24%), Positives = 130/324 (40%), Gaps = 55/324 (16%)
Query: 158 EPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLIA---LYFAHLA 209
EP+GV+ I P P T +F K AL +I A+++ + A + A A
Sbjct: 107 EPVGVIAGITPTTNPTSTAIF--KALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA--A 162
Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 269
AG P ++ + A+ +H I + TG M AA S+ KP +L
Sbjct: 163 VAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPG-----MVKAAYSSGKP-ALG 216
Query: 270 LG-GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328
+G G P I D+ A + LL F+ G IC + V V + IYDE +++
Sbjct: 217 VGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH-G 275
Query: 329 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 388
A+ + + + K+ ++ + E+G +G+ Y I
Sbjct: 276 AYFL-----------NKKELKKLEKFIFGKENGALNADI-------VGQSAYKIAEMAGF 317
Query: 389 NVTED--MLIA------KNEIFG-----PVMALMKFKTVEEAIKSANN-TRYGLA---AG 431
V ED +LIA ++E PV+A+ K K E+A++ A +G A
Sbjct: 318 KVPEDTKILIAEVKGVGESEPLSHEKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAV 377
Query: 432 IMTKDLNVANTVSRSIRAGIIWIN 455
I T D + ++A I +N
Sbjct: 378 IYTNDDELIKEFGLRMKACRILVN 401
|
Length = 862 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 13/173 (7%)
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAKLAG 213
P+GVV +IP PT+ K ++ A ++ P + A+ AG
Sbjct: 103 VPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAG 162
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
P+G + + + + D + TG + M AA S+ P G
Sbjct: 163 APEGAIGCITVPTIEGTNELMKNKDTSLILATGG-----EAMVKAAYSSGTPAIGVGPGN 217
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ----EGIYDEFEKK 322
P I +V A + F+ G IC + + V+ + + +E +K+
Sbjct: 218 GPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQ 270
|
Length = 488 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 502 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.96 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.83 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.54 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.2 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.49 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.72 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.22 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.16 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.12 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.04 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.98 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.78 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 96.69 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 96.67 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.41 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 85.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 83.71 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-109 Score=820.58 Aligned_cols=480 Identities=59% Similarity=0.957 Sum_probs=463.3
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+++.++++++++||.||++++++..++.+||+.+|++||+||+.+.|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 47999999999989999999999999999999999999999999999999983349999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
.|+.+.+.+.|||..+++..++..+++.++|++.|++..++..++.......|+.++|+|||+.|.|||||+....|+++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKla 180 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLA 180 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhh
Confidence 99999999999999988779999999999999999988877766666667899999999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
|||++||+||+||++.+|+|+..++++++++|+|+|++|+|+|.|.+.+.+|.+|++|+.|.||||+.+|+.|++.++..
T Consensus 181 PALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~ 260 (501)
T KOG2450|consen 181 PALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAES 260 (501)
T ss_pred hHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998866
Q ss_pred CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc-cccCCCCCCCC
Q 010735 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAV 340 (502)
Q Consensus 262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~~~~~ 340 (502)
++||+.+|+|||+|.||++|||++.|++.+.++.|+|+||.|++.+|+|||+++||+|+++++++..+ +++|||.++.+
T Consensus 261 n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~ 340 (501)
T KOG2450|consen 261 NLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGT 340 (501)
T ss_pred CCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999966 99999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
.+||.+++.|++||.+||+.++++||++++||.+..+.|+|+.|||+.++.++|.+++||+||||+.|++|++.||+|++
T Consensus 341 ~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~ 420 (501)
T KOG2450|consen 341 EQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIER 420 (501)
T ss_pred ccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHH
Confidence 99999999999999999999999999999999887678999999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCCCC
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSP 500 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~ 500 (502)
+|++.|||++.|||+|.++++++++++++|+||||++...+...||||+|+||+||+.|.+++++|++.|+|+++..+..
T Consensus 421 AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~~~~~ 500 (501)
T KOG2450|consen 421 ANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKLPQKN 500 (501)
T ss_pred hcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred C
Q 010735 501 W 501 (502)
Q Consensus 501 ~ 501 (502)
|
T Consensus 501 ~ 501 (501)
T KOG2450|consen 501 S 501 (501)
T ss_pred C
Confidence 3
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-105 Score=841.31 Aligned_cols=497 Identities=82% Similarity=1.299 Sum_probs=465.5
Q ss_pred CCccccccCCCCccc--ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010735 6 SNGSCKSLFKMPEIK--FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83 (502)
Q Consensus 6 ~~~~~~~~~~~~~~~--~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~ 83 (502)
|++.|.+..+..|.+ ..++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~ 82 (501)
T PLN02766 3 SNGNCGGASGVKVPEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGF 82 (501)
T ss_pred CCCCCCccccccCCCcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHH
Confidence 678898888766544 567899999998766789999999999999999999999999999999999972249999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEE
Q 010735 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVV 163 (502)
Q Consensus 84 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 163 (502)
+|.++|++++++|+++.++|++++++|+|||..++...|+..+++.+++++..+++..+...+...+...++.++|+|||
T Consensus 83 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV 162 (501)
T PLN02766 83 ERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVV 162 (501)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEE
Confidence 99999999999999999999999999999999976556999999999999988776655433322334567889999999
Q ss_pred EEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEE
Q 010735 164 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243 (502)
Q Consensus 164 ~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ 243 (502)
++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|++++++.+++..|+.||++|.|.
T Consensus 163 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~ 242 (501)
T PLN02766 163 GHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVS 242 (501)
T ss_pred EEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997778899999999999999
Q ss_pred EcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHH
Q 010735 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323 (502)
Q Consensus 244 ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l 323 (502)
||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 243 FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l 322 (501)
T PLN02766 243 FTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKL 322 (501)
T ss_pred EECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHH
Confidence 99999999999998873478999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceee
Q 010735 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 403 (502)
Q Consensus 324 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 403 (502)
+++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||......|+|++|||+.+++++|++++||+||
T Consensus 323 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FG 402 (501)
T PLN02766 323 VEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFG 402 (501)
T ss_pred HHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccC
Confidence 99999999999999999999999999999999999999999999999997654468999999999999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHH
Q 010735 404 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 483 (502)
Q Consensus 404 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~ 483 (502)
||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 403 PVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l 482 (501)
T PLN02766 403 PVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDAL 482 (501)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999877778899999999999999999999
Q ss_pred HhhhhccEEEEecCCCCCC
Q 010735 484 HNYLQVKSVVTPIFNSPWL 502 (502)
Q Consensus 484 ~~~~~~k~v~~~~~~~~~~ 502 (502)
++|+++|++++.+.+.||+
T Consensus 483 ~~ft~~k~v~~~~~~~~~~ 501 (501)
T PLN02766 483 DKYLQVKSVVTPLYNSPWL 501 (501)
T ss_pred HHHhceEEEEEeccccccC
Confidence 9999999999999999996
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-106 Score=759.02 Aligned_cols=471 Identities=38% Similarity=0.661 Sum_probs=452.3
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
..+.||+|+|+++.++++|+|.||++||.|+.++..+.++.+.|++.|.+||+ .|+.++..+|.++|+++.++|.+|.
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~ 100 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK 100 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence 45689999999998889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
++|++++++|.|||+.|+ .+||..+..++++|+..++++.|+..+.. +.....+.++|+||+++|+|||||......+
T Consensus 101 ddLa~iiTlE~GKpL~eA-~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK 179 (503)
T KOG2451|consen 101 DDLATIITLENGKPLGEA-KGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK 179 (503)
T ss_pred HHHHHHHhhhcCCchhhc-cceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence 999999999999999975 78999999999999999999999876643 5567789999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC---chhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF---GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~---~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
..+||++||+||+||++++|++++.++++..+||+|+|++|+++++ ..+.++.|+.+|+|+.|+||||+.+|+.+++
T Consensus 180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~ 259 (503)
T KOG2451|consen 180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA 259 (503)
T ss_pred HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence 9999999999999999999999999999999999999999999963 4578999999999999999999999999999
Q ss_pred HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (502)
Q Consensus 257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~ 336 (502)
+++ .+.|++.+|||||.|+||++|||+|.|++..+..+|.++||.|.+.+|+|||+++||+|+..|.++++++++||.+
T Consensus 260 qsa-stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 260 QSA-STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred hhh-hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 988 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415 (502)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 415 (502)
++++..||||+..+.+++.++++||+++|+++++||+... ..++|++|||+.+++.+|-+..||+|||+.+|++|+|.|
T Consensus 339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdtee 418 (503)
T KOG2451|consen 339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEE 418 (503)
T ss_pred CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHH
Confidence 9999999999999999999999999999999999999543 345999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|+|+++|+++.||++|+||+|..+..+++++|++|+|.+|.-...+...||||+|+||+||+++++|+++|+..|.+.+.
T Consensus 419 Evi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig 498 (503)
T KOG2451|consen 419 EVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIG 498 (503)
T ss_pred HHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeec
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999988764
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-104 Score=829.15 Aligned_cols=469 Identities=36% Similarity=0.654 Sum_probs=443.5
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~e 89 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQDD 89 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 479999999866678999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+...+++++|+|||++|+|||||+..++++++
T Consensus 90 la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (482)
T PRK11241 90 LARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAG 168 (482)
T ss_pred HHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHH
Confidence 9999999999999975 57999999999999988876655433321 234467899999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
+||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+++|+.|++.++ .
T Consensus 169 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa-~ 247 (482)
T PRK11241 169 PALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA-K 247 (482)
T ss_pred HHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-h
Confidence 999999999999999999999999999999999999999999977778999999999999999999999999999987 7
Q ss_pred CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (502)
Q Consensus 262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~ 341 (502)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 248 ~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~ 327 (482)
T PRK11241 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVT 327 (482)
T ss_pred cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 421 (502)
+||++++.+++++++++++++++|+++++||.....+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 328 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~a 407 (482)
T PRK11241 328 IGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQA 407 (482)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHh
Confidence 99999999999999999999999999999997643368999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|+++|||++||||+|.+.++++++++++|.||||++....+.+||||+|.||+|+++|.+|+++|++.|++++.
T Consensus 408 N~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 408 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 99999999999999999999999999999999999876667789999999999999999999999999998754
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-103 Score=827.05 Aligned_cols=481 Identities=58% Similarity=0.995 Sum_probs=454.3
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++.|+.++.++|.++|++++++|+++.+
T Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 137 (538)
T PLN02466 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHND 137 (538)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 35799999998767889999999999999999999999999999999999972249999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
+|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 138 ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~ 217 (538)
T PLN02466 138 ELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 217 (538)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHh
Confidence 99999999999999977567999999999999998877666544432333467899999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
+||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.+++..|+.||++|.|.||||+++|+.|++.++..
T Consensus 218 pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~ 297 (538)
T PLN02466 218 PALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKS 297 (538)
T ss_pred HHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997777899999999999999999999999999988744
Q ss_pred CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (502)
Q Consensus 262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~ 341 (502)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|.+++++
T Consensus 298 ~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~ 377 (538)
T PLN02466 298 NLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVE 377 (538)
T ss_pred CCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 421 (502)
+||++++++++++++++++++.+|+++++||.....+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 378 ~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~a 457 (538)
T PLN02466 378 QGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRA 457 (538)
T ss_pred CccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999998754568999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCCCCC
Q 010735 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 501 (502)
Q Consensus 422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~~ 501 (502)
|+++|||+++|||+|.+.++++++++++|.|+||++...++.+||||+|.||+|+++|++|+++|++.|+++..+.+-.|
T Consensus 458 N~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~~~~ 537 (538)
T PLN02466 458 NNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAW 537 (538)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCCCCC
Confidence 99999999999999999999999999999999999877778899999999999999999999999999999999999999
Q ss_pred C
Q 010735 502 L 502 (502)
Q Consensus 502 ~ 502 (502)
+
T Consensus 538 ~ 538 (538)
T PLN02466 538 L 538 (538)
T ss_pred C
Confidence 6
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-103 Score=813.76 Aligned_cols=466 Identities=50% Similarity=0.819 Sum_probs=441.8
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|++..+ +++++||+||+++++++.++.+|+++|+++|+.+|+ .|++++..+|.++|++++++|++|.++
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e 77 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE 77 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 5799999998644 899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|++++++|+|||+.++. .|+..+++.++|++.++++..+...+.......+++++|+|||++|+|||||++..+++++|
T Consensus 78 la~~~~~e~Gk~i~ea~-~ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap 156 (472)
T COG1012 78 LAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP 156 (472)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence 99999999999999764 56999999999999999877665433333567899999999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|+.||+|++|+||||+.+|+.|++.++ ++
T Consensus 157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa-~~ 235 (472)
T COG1012 157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-AN 235 (472)
T ss_pred HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh-hc
Confidence 99999999999999999999999999999999999999999977778999999999999999999999999999988 89
Q ss_pred CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc-cccCCCCCCCCc
Q 010735 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVR 341 (502)
Q Consensus 263 ~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~~~~~~ 341 (502)
+||+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++||+.|+.++
T Consensus 236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~ 314 (472)
T COG1012 236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD 314 (472)
T ss_pred CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 66 899998899999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 421 (502)
+||+++..+++++.++|++++.+|++++.||.. .. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lA 392 (472)
T COG1012 315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELA 392 (472)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999983 33 9999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
|+++|||+++|||+|..++.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|++..++.
T Consensus 393 N~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 393 NDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 99999999999999999999999999999999999853 44779999999999999999999999999999988754
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-103 Score=822.69 Aligned_cols=481 Identities=33% Similarity=0.460 Sum_probs=446.4
Q ss_pred ccccCCCC----cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010735 10 CKSLFKMP----EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAER 85 (502)
Q Consensus 10 ~~~~~~~~----~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R 85 (502)
|++..+.+ +....++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR 175 (604)
T PLN02419 98 LSTSPEQSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTR 175 (604)
T ss_pred hccCCCcccCcccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHH
Confidence 55544433 33455689999999875667899999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEE
Q 010735 86 RGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVG 164 (502)
Q Consensus 86 ~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~ 164 (502)
.++|++++++|++++++|++++++|+|||+.++ ..|+..+++.+++++.+++...+...+. ..+...+++++|+|||+
T Consensus 176 ~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea-~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~ 254 (604)
T PLN02419 176 QRVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCA 254 (604)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEE
Confidence 999999999999999999999999999999976 4699999999999999887665543332 13445688999999999
Q ss_pred EEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEE
Q 010735 165 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244 (502)
Q Consensus 165 ~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~f 244 (502)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +.++.|+.|++||.|+|
T Consensus 255 ~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~F 333 (604)
T PLN02419 255 GICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSF 333 (604)
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999954 67899999999999999
Q ss_pred cCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHH
Q 010735 245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324 (502)
Q Consensus 245 tGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~ 324 (502)
|||+++|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+
T Consensus 334 TGSt~vG~~I~~~Aa-~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~ 411 (604)
T PLN02419 334 VGSNTAGMHIYARAA-AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLV 411 (604)
T ss_pred eCChHHHHHHHHHHh-ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHH
Confidence 999999999999987 789999999999999999999999999999999999999999999999999999 899999999
Q ss_pred HHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccc
Q 010735 325 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNE 400 (502)
Q Consensus 325 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E 400 (502)
++++++++|+|.|+++++||++++.+++++.+++++|+.+|+++++||... ..+|+|++|||+.+++++|.+++||
T Consensus 412 ~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eE 491 (604)
T PLN02419 412 ERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEE 491 (604)
T ss_pred HHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCC
Confidence 999999999999999999999999999999999999999999999999752 1368999999999999999999999
Q ss_pred eeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCC--Cc
Q 010735 401 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG--RD 477 (502)
Q Consensus 401 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g--~~ 477 (502)
+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||+| ++
T Consensus 492 iFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~ 571 (604)
T PLN02419 492 IFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNF 571 (604)
T ss_pred CcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999998743 3478999999999999 79
Q ss_pred chHHHHHhhhhccEEEEec
Q 010735 478 CGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 478 ~g~~~~~~~~~~k~v~~~~ 496 (502)
+|.+|+++|++.|+|+++.
T Consensus 572 ~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 572 YGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred cHHHHHHHhhCeEEEEEcc
Confidence 9999999999999998765
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-102 Score=812.58 Aligned_cols=476 Identities=46% Similarity=0.827 Sum_probs=445.9
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
...++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.+|.++|.++|++++++|+++
T Consensus 4 ~~~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 83 (486)
T cd07140 4 MPHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEH 83 (486)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHh
Confidence 34578999999986667889999999999999999999999999999999999721499999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc----cccccceeecCCeEEEEEcCCChhHHh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
+++|++++++|+|||..++...|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+..
T Consensus 84 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~ 163 (486)
T cd07140 84 QEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMM 163 (486)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHH
Confidence 9999999999999999976557999999999999998877655443321 122357889999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||+|+.|.||||+.+|+.|+
T Consensus 164 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 243 (486)
T cd07140 164 LAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243 (486)
T ss_pred HHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p 323 (486)
T cd07140 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDP 323 (486)
T ss_pred HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCC
Confidence 99873378999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--C
Q 010735 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--T 413 (502)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~ 413 (502)
.++++++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+ |
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~ 403 (486)
T cd07140 324 LDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD 403 (486)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCC
Confidence 99999999999999999999999999999999999997654568999999999999999999999999999999998 6
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++|||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 404 ~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~ 483 (486)
T cd07140 404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVT 483 (486)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEE
Confidence 99999999999999999999999999999999999999999998777788999999999999999999999999999998
Q ss_pred Ee
Q 010735 494 TP 495 (502)
Q Consensus 494 ~~ 495 (502)
++
T Consensus 484 ~~ 485 (486)
T cd07140 484 IE 485 (486)
T ss_pred Ee
Confidence 75
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-101 Score=807.72 Aligned_cols=468 Identities=37% Similarity=0.645 Sum_probs=440.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++++
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ 78 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 368999999975 467899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||..++...|+..+++.+++++..++.+.+...+. ..+...++.++|+|||++|+|||||+..+++++
T Consensus 79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 158 (472)
T TIGR03374 79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 158 (472)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence 9999999999999997655699999999999988776655432211 123456789999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.++++.|+.||++|.|.||||+++|+.|++.++
T Consensus 159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa- 236 (472)
T TIGR03374 159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA- 236 (472)
T ss_pred HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-
Confidence 99999999999999999999999999999885 9999999999977788999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
.++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
++||+++..+++++.++|++++++| +++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 396 (472)
T TIGR03374 317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVN 396 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHH
Confidence 9999999999999999999999999 799999976544689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|++++
T Consensus 397 ~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 397 WANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999987777889999999999999999999999999999865
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-101 Score=808.81 Aligned_cols=474 Identities=63% Similarity=1.054 Sum_probs=445.4
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.++.++|.++|++++++|+++.
T Consensus 3 ~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07142 3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHA 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34689999999866678899999999999999999999999999999999997113999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
++|++++++|+|||..++...|+..+++.+++++.++++..+...+.......++.++|+|||++|+|||||+...++++
T Consensus 83 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 83 DELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 99999999999999997655699999999999999887766554443223345788999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.||++|.|+||||+.+|+.|++.++.
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~ 242 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999999873
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++
T Consensus 243 ~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 322 (476)
T cd07142 243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGV 322 (476)
T ss_pred cCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++||++++.+++++.+++++++.+|+++++||.....+|+|+.|||+.++++++++++||+||||++|++|+|++|||++
T Consensus 323 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 402 (476)
T cd07142 323 EQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKR 402 (476)
T ss_pred cCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999875557899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
+|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus 403 ~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 476 (476)
T cd07142 403 ANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476 (476)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEeC
Confidence 99999999999999999999999999999999999987778889999999999999999999999999999863
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-101 Score=807.94 Aligned_cols=470 Identities=42% Similarity=0.689 Sum_probs=443.9
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.+
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIANKE 102 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999865678999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||..++ ..|+..+++.+++++..++...+...+.. .+...+++++|+|||++|+|||||++..++++
T Consensus 103 ~la~~~~~e~Gk~~~~a-~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i 181 (498)
T PLN02278 103 DLAQLMTLEQGKPLKEA-IGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181 (498)
T ss_pred HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence 99999999999999976 56999999999999988876655433322 23456788999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++++.++.|+.||++|.|.||||+++|+.|++.++
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa- 260 (498)
T PLN02278 182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAA- 260 (498)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999977678899999999999999999999999999887
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|.++++
T Consensus 261 ~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~ 340 (498)
T PLN02278 261 ATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGV 340 (498)
T ss_pred hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++||++++.+++++.+++++++.+|+++++||.....+|+|+.|||+.+++++|+++++|+||||++|++|+|+||||++
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~ 420 (498)
T PLN02278 341 TQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAI 420 (498)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999765446899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
+|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 421 ~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 421 ANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 999999999999999999999999999999999999776667899999999999999999999999999999764
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-101 Score=806.92 Aligned_cols=468 Identities=40% Similarity=0.692 Sum_probs=440.9
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
+||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++ . |++++.++|.++|++++++|++++++
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV--SAWAKTTPAERGRILLRLADLIEQHGEE 79 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH--hhhccCCHHHHHHHHHHHHHHHHHCHHH
Confidence 68999999876677899999999999999999999999999999999998 5 99999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc------cccccceeecCCeEEEEEcCCChhHHhh
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS------RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
|++++++|+|||..++...|+..+++.+++++.+++...+...+.. .+...+++++|+|||++|+|||||+...
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 159 (477)
T cd07113 80 LAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIA 159 (477)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHH
Confidence 9999999999999976546999999999999988776554432111 1234578999999999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++. .+..|+.||++|+|.||||+++|+.|.+
T Consensus 160 ~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 238 (477)
T cd07113 160 VWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGR 238 (477)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999765 8899999999999999999999999999
Q ss_pred HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (502)
Q Consensus 257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~ 336 (502)
.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 239 ~aa-~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 317 (477)
T cd07113 239 QAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPM 317 (477)
T ss_pred HHH-hhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 987 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHH
Q 010735 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 416 (502)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 416 (502)
++++++||++++.+++++.+++++++.+|+++++||....++|+|+.|||+.+++++|+++++|+||||++|++|+|+||
T Consensus 318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976544689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999998777778899999999999999999999999999999765
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-101 Score=808.97 Aligned_cols=475 Identities=45% Similarity=0.762 Sum_probs=447.5
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
++..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|++++++|++
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (488)
T PRK13252 4 QPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRE 81 (488)
T ss_pred CccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 5667889999999866678999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
++++|++++++|+|||..++...|+..+++.+++++.+++...+...+...+...+++++|+|||++|+|||||+..+++
T Consensus 82 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~ 161 (488)
T PRK13252 82 RNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACW 161 (488)
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHH
Confidence 99999999999999999977556999999999999988876655443332344567899999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++. +++.|+.||++|.|+||||+++|+.|.+.+
T Consensus 162 ~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 240 (488)
T PRK13252 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAA 240 (488)
T ss_pred HHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998665 889999999999999999999999999988
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+ ..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 241 a-~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 319 (488)
T PRK13252 241 A-ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDP 319 (488)
T ss_pred h-hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 7 679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
++++||++++.+++++++++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 320 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~ 399 (488)
T PRK13252 320 ATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDE 399 (488)
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCH
Confidence 99999999999999999999999999999999996432 25899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
+|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 400 ~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~ 479 (488)
T PRK13252 400 DEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQV 479 (488)
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999977667789999999999999999999999999999988
Q ss_pred ecC
Q 010735 495 PIF 497 (502)
Q Consensus 495 ~~~ 497 (502)
.+.
T Consensus 480 ~~~ 482 (488)
T PRK13252 480 EMG 482 (488)
T ss_pred eCC
Confidence 753
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-100 Score=800.34 Aligned_cols=469 Identities=47% Similarity=0.804 Sum_probs=442.8
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL 79 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 479999999876678999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|++++++|+|||+.++...|+..+++.+++++.+++...+...+...+...+.+++|+|||++|+|||||+..+++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999876569999999999999877665554333223345678999999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|.++..+++++.++ +|+|++|++++++.+++..|+.|+++|.|+||||+.+|+.|.+.++ .+
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~ 237 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KK 237 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cc
Confidence 999999999999999999999999999886 9999999999977778999999999999999999999999999887 78
Q ss_pred CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcc
Q 010735 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342 (502)
Q Consensus 263 ~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~ 342 (502)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++
T Consensus 238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~ 317 (475)
T cd07117 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM 317 (475)
T ss_pred CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI 418 (502)
Q Consensus 343 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 418 (502)
||++++.+++++.+++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||
T Consensus 318 gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai 397 (475)
T cd07117 318 GAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVI 397 (475)
T ss_pred cCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHH
Confidence 9999999999999999999999999999997642 358999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|.||+|+++|.+|+++|++.|+++++
T Consensus 398 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 398 DMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred HHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 99999999999999999999999999999999999999877778899999999999999999999999999999764
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-100 Score=802.47 Aligned_cols=470 Identities=48% Similarity=0.807 Sum_probs=444.8
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++|.++
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL 79 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|++++++|+|||+.++...|+..+++.+++++.+++...+...+...+...++.++|+|||++|+|||||+..+++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999876679999999999999887765554333333445678999999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.++++.|+.||++|.|.||||+.+|+.|++.++ ..
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa-~~ 237 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA-EN 237 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cc
Confidence 999999999999999999999999999996 9999999999977788999999999999999999999999999987 78
Q ss_pred CCceEEecCCCCceEEccCC-----CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 263 LKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 263 ~~~~~~e~gG~~~~iV~~da-----dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (480)
T cd07559 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD 317 (480)
T ss_pred CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
+++++||++++.+++++.+++++++.+|+++++||.... ..|+|+.|||+.+++++|+++++|+||||++|++|+|
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 397 (480)
T cd07559 318 PETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKD 397 (480)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCC
Confidence 999999999999999999999999999999999997643 3689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 398 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 477 (480)
T cd07559 398 EEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNIL 477 (480)
T ss_pred HHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999988777788999999999999999999999999999998
Q ss_pred Eec
Q 010735 494 TPI 496 (502)
Q Consensus 494 ~~~ 496 (502)
+++
T Consensus 478 ~~~ 480 (480)
T cd07559 478 VSY 480 (480)
T ss_pred EeC
Confidence 753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-100 Score=802.05 Aligned_cols=476 Identities=58% Similarity=0.949 Sum_probs=447.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
....++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+ .|+.+|.++|.++|++++++|+
T Consensus 4 ~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~ 83 (481)
T cd07141 4 IKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIE 83 (481)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHH
Confidence 445678999999987667899999999999999999999999999999999999721 4999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
++.++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|||||+..++
T Consensus 84 ~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 163 (481)
T cd07141 84 RDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAA 163 (481)
T ss_pred HhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHHH
Confidence 99999999999999999976666799999999999999887776654433223446789999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.|+++|.|+||||+.+|+.|++.
T Consensus 164 ~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~ 243 (481)
T cd07141 164 WKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQA 243 (481)
T ss_pred HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777788999999999999999999999999998
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 244 aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 323 (481)
T cd07141 244 AGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFD 323 (481)
T ss_pred hhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 77337899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
+++++||++++.+++++.+++++++.+|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|++||
T Consensus 324 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 403 (481)
T cd07141 324 PKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEV 403 (481)
T ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999875557899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
|+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||++|++++
T Consensus 404 i~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 404 IERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred HHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 99999999999999999999999999999999999999987777889999999999999999999999999999875
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=797.10 Aligned_cols=473 Identities=46% Similarity=0.778 Sum_probs=445.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhc-----ccCCCCCCCHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-----DHGPWPRFSGAERRGIMLKFAD 94 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~-----~~~~w~~~~~~~R~~~L~~~a~ 94 (502)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|| + .|+.++..+|.++|+++++
T Consensus 6 ~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a~ 83 (503)
T PLN02467 6 PRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIAA 83 (503)
T ss_pred CccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHHH
Confidence 34578999999987667899999999999999999999999999999999999 8 8999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee-ec--c-cccccceeecCCeEEEEEcCCC
Q 010735 95 LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM--S-RALQGYTLREPIGVVGHIIPWN 170 (502)
Q Consensus 95 ~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~P~Gvv~~i~p~n 170 (502)
+|++++++|++++++|+|||+.++. .|+..+++.+++++.+++++.+... +. . .+...+++++|+|||++|+|||
T Consensus 84 ~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 162 (503)
T PLN02467 84 KITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWN 162 (503)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCC
Confidence 9999999999999999999999764 6999999999999998877655421 11 1 1234678999999999999999
Q ss_pred hhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHH
Q 010735 171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250 (502)
Q Consensus 171 ~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~ 250 (502)
||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.|+++|.|.||||+.+
T Consensus 163 ~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~ 242 (503)
T PLN02467 163 YPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTAT 242 (503)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHH
Confidence 99999999999999999999999999999999999999999999999999999977778999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (502)
Q Consensus 251 g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (502)
|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 243 g~~v~~~aa-~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 321 (503)
T PLN02467 243 GRKIMTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNI 321 (503)
T ss_pred HHHHHHHHh-ccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence 999999987 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEE
Q 010735 331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (502)
Q Consensus 331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 408 (502)
++|+|.++++++||++++.+++++.+++++++.+|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|
T Consensus 322 ~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v 401 (503)
T PLN02467 322 KISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCV 401 (503)
T ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEE
Confidence 9999999999999999999999999999999999999999997642 25899999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhh
Q 010735 409 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 488 (502)
Q Consensus 409 ~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~ 488 (502)
++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 402 ~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 481 (503)
T PLN02467 402 KTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLS 481 (503)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999977666789999999999999999999999999
Q ss_pred ccEEEEec
Q 010735 489 VKSVVTPI 496 (502)
Q Consensus 489 ~k~v~~~~ 496 (502)
.|+++...
T Consensus 482 ~k~i~~~~ 489 (503)
T PLN02467 482 VKQVTKYI 489 (503)
T ss_pred eEEEEEec
Confidence 99998864
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-99 Score=794.91 Aligned_cols=473 Identities=56% Similarity=0.913 Sum_probs=445.3
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
.++||||+|+.++++.++.++||+||+++++++.++.+|+++++++|++||+. .|+ .+|.++|.++|++++++|++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~ 85 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL 85 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence 46899999998766788999999999999999999999999999999999972 399 9999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+..+++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999976666799999999999999987665543332233456789999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.++++.|+.||++|.|.||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999998773
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++||++++.+++++.+++++++.+|+++++||......|+|+.|||+.++++++++++||+||||++|++|+|++|||++
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 405 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKR 405 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999875457899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
+|+++|||++||||+|.+.+.++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|+++++
T Consensus 406 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 406 ANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999999877778899999999999999999999999999999764
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=797.45 Aligned_cols=468 Identities=41% Similarity=0.715 Sum_probs=439.6
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ . |+++|.++|.++|++++++|+++.+
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 77 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD 77 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 5799999996 468899999999999999999999999999999999998 8 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc----cccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+|++++++|+|||..++...|+..+++.+++++..++...+...+.. .+...+.+++|+|||++|+|||||+...+
T Consensus 78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~ 157 (481)
T TIGR03216 78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT 157 (481)
T ss_pred HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence 99999999999999976556999999999999988766544432211 12345788999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCch-hHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~-~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
+++++||++||+||+|||+.+|.++.++++++.++|+|+|++++++|++. +.++.|..||++|.|+||||+.+|+.|++
T Consensus 158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998654 47888999999999999999999999999
Q ss_pred HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (502)
Q Consensus 257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~ 336 (502)
.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.
T Consensus 238 ~aa-~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 987 7889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-----CCCceEecEEEeeCCCCCcccccceeeceEEEEEe
Q 010735 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (502)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 411 (502)
++++++||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999999997532 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccE
Q 010735 412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491 (502)
Q Consensus 412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~ 491 (502)
+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+
T Consensus 397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~ 476 (481)
T TIGR03216 397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTN 476 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999987777889999999999999999999999999999
Q ss_pred EEEe
Q 010735 492 VVTP 495 (502)
Q Consensus 492 v~~~ 495 (502)
++++
T Consensus 477 v~~~ 480 (481)
T TIGR03216 477 VCIK 480 (481)
T ss_pred EEEe
Confidence 9765
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=796.21 Aligned_cols=469 Identities=27% Similarity=0.474 Sum_probs=437.5
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|++++++|+++.
T Consensus 20 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
T PLN02315 20 NLGCYVGGEWRA--NGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRAKL 95 (508)
T ss_pred ccCceECCEEec--CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHH
Confidence 346899999986 367899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
++|++++++|+|||+.++ ..|+..+++.++|++..++.+.+...+.. .+...+..++|+|||++|+|||||+..++++
T Consensus 96 ~~la~~~~~e~GK~~~~a-~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 174 (508)
T PLN02315 96 DYLGRLVSLEMGKILAEG-IGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWN 174 (508)
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 999999999999999976 57999999999999988776655433322 2334567899999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHH----HHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALY----FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~----l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
+++||++||+||+|||+.+|+++.. +.+++.++|+|+|++|++++ +.+.++.|+.||++|.|.||||+++|+.|+
T Consensus 175 ~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~ 253 (508)
T PLN02315 175 ACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQ 253 (508)
T ss_pred HhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999887 67888999999999999998 777899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 254 ~~aa-~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p 332 (508)
T PLN02315 254 QTVN-ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDP 332 (508)
T ss_pred HHHH-hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9877 778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415 (502)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 415 (502)
.++++++||+++..+++++.+++++++++|+++++||.....+|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 333 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~d 411 (508)
T PLN02315 333 LEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLE 411 (508)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHH
Confidence 9999999999999999999999999999999999999765446899999999 699999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHh--hcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSR--SIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~--~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|||+++|+++|||+++|||+|.+.++++++ ++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 412 eai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v 491 (508)
T PLN02315 412 EAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC 491 (508)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEE
Confidence 999999999999999999999999999985 79999999998654 347889999999999999999999999999999
Q ss_pred EEecC
Q 010735 493 VTPIF 497 (502)
Q Consensus 493 ~~~~~ 497 (502)
++++.
T Consensus 492 ~~~~~ 496 (508)
T PLN02315 492 TINYG 496 (508)
T ss_pred EEecC
Confidence 88753
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-99 Score=796.55 Aligned_cols=470 Identities=44% Similarity=0.744 Sum_probs=442.4
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 79 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE 79 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876678899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhh-hhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD-KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
|++++++|+|||+.++. .|+..+++.++++++.++ ...+...+.. ....+.+++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 99999999999999765 799999999999988776 3333333322 33457889999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
+||++||+||+|||+.+|.++.++.++|.++|+|+|+++++++++++.++.|+.|+++|.|.||||+.+|+.|++.++ .
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa-~ 236 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGA-D 236 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-h
Confidence 999999999999999999999999999999999999999999877778899999999999999999999999999987 7
Q ss_pred CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (502)
Q Consensus 262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~ 341 (502)
.++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.
T Consensus 237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (488)
T TIGR02299 237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316 (488)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-------CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
+||++++.+++++.+++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 396 (488)
T TIGR02299 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDE 396 (488)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCH
Confidence 99999999999999999999999999999997532 25899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
+|||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus 397 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~ 476 (488)
T TIGR02299 397 EEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL 476 (488)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEE
Confidence 99999999999999999999999999999999999999999987777789999999999999999999999999999998
Q ss_pred ecC
Q 010735 495 PIF 497 (502)
Q Consensus 495 ~~~ 497 (502)
+++
T Consensus 477 ~~~ 479 (488)
T TIGR02299 477 ALG 479 (488)
T ss_pred ecC
Confidence 763
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-99 Score=793.08 Aligned_cols=472 Identities=60% Similarity=0.962 Sum_probs=445.3
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHHHHHHH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP--RFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~--~~~~~~R~~~L~~~a~~l~~ 98 (502)
..++||||+|+.++++.+++++||+||+++++++.++.+|++++++.|++||+ .|+ .++.++|.++|++++++|.+
T Consensus 3 ~~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~~~w~~~~~~~R~~~L~~~a~~l~~ 80 (476)
T cd07091 3 PTGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFE--TGWWRKMDPRERGRLLNKLADLIER 80 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcc--cCccccCCHHHHHHHHHHHHHHHHH
Confidence 35789999999766678999999999999999999999999999999999999 654 99999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
+.++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+...++
T Consensus 81 ~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (476)
T cd07091 81 DRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAW 160 (476)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHH
Confidence 99999999999999999766667999999999999988776655544333445568899999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|.++..++++|.++|+|+|+++++++++.++++.|+.|+++|.|.||||+.+|+.|++.+
T Consensus 161 ~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~a 240 (476)
T cd07091 161 KLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAA 240 (476)
T ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997777889999999999999999999999999988
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+..+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus 241 a~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~ 320 (476)
T cd07091 241 AKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDP 320 (476)
T ss_pred HhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 73388999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI 418 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 418 (502)
++++||++++.+++++.+++++++.+|+++++||..+...|+|++|||+.+++++|++++||+||||++|++|+|++||+
T Consensus 321 ~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai 400 (476)
T cd07091 321 DTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVI 400 (476)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHH
Confidence 99999999999999999999999999999999998765578999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus 401 ~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 401 ERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999999999999987777899999999999999999999999999999853
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-99 Score=792.75 Aligned_cols=470 Identities=40% Similarity=0.673 Sum_probs=443.4
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++++
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 79 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD 79 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 357999999875 568999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||..++...|+..+++.+++++..++.+.+...+. ..+...+++++|+|||++|+|||||+...++++
T Consensus 80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i 159 (475)
T PRK13473 80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL 159 (475)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence 9999999999999987655699999999999998777665432221 123346788999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.+.+..|+.|+++|.|.||||+++|+.|.+.++
T Consensus 160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa- 237 (475)
T PRK13473 160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA- 237 (475)
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-
Confidence 99999999999999999999999999999999 9999999999977788999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 238 ~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 238 DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
++||++++.+++++.++++++..+| +++++||......|+|+.|||+.++++++++++||+||||++|++|+|+||||+
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~ 397 (475)
T PRK13473 318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVR 397 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHH
Confidence 9999999999999999999999999 999999986544689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|+++++|
T Consensus 398 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 398 WANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999999998777788999999999999999999999999999998876
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-99 Score=793.28 Aligned_cols=473 Identities=53% Similarity=0.890 Sum_probs=444.7
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++ . |+.+|.++|.++|++++++|.+
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~ 83 (484)
T cd07144 6 QPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEK 83 (484)
T ss_pred cCcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHH
Confidence 345689999999865567899999999999999999999999999999999998 6 8899999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
++++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+..+++
T Consensus 84 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~ 163 (484)
T cd07144 84 NRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAW 163 (484)
T ss_pred hHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHH
Confidence 99999999999999998765567999999999999998877755444333334467889999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|++++++.+.++.|+.||++|.|.||||+.+|+.|.+.+
T Consensus 164 ~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 243 (484)
T cd07144 164 KLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243 (484)
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997777899999999999999999999999999987
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc-cccCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFD 337 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~~ 337 (502)
+ ..++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++++ +++|+|.+
T Consensus 244 ~-~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~ 322 (484)
T cd07144 244 A-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFD 322 (484)
T ss_pred H-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCC
Confidence 7 788999999999999999999999999999999999999999999999999999999999999999985 89999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
+++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 402 (484)
T cd07144 323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTY 402 (484)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCH
Confidence 999999999999999999999999999999999997643 26899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
+|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+.
T Consensus 403 ~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 482 (484)
T cd07144 403 EEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHI 482 (484)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999976
Q ss_pred e
Q 010735 495 P 495 (502)
Q Consensus 495 ~ 495 (502)
+
T Consensus 483 ~ 483 (484)
T cd07144 483 N 483 (484)
T ss_pred e
Confidence 5
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-99 Score=792.12 Aligned_cols=467 Identities=43% Similarity=0.709 Sum_probs=437.5
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM 79 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876678999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|++++++|+|||+.++...|+..+++.+++++...+...+...+...+...+++++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999765569999999999999887665544333333345678999999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|.+.+.+..|+.||++|.|.||||+++|+.|++.++ ..
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-~~ 237 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS-EN 237 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH-cC
Confidence 999999999999999999999999999998 9999999999877778999999999999999999999999999987 77
Q ss_pred CCceEEecCCCCceEEccC------CCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735 263 LKPVSLELGGKSPLLIFDD------VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (502)
Q Consensus 263 ~~~~~~e~gG~~~~iV~~d------adl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~ 336 (502)
++|+++|+|||||+||++| ||++.|++.++++. +|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (479)
T cd07116 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL 316 (479)
T ss_pred CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999987 79999999999864 6999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
++++.+||++++.+++++++++++++.+|+++++||.... .+|+|+.|||+.+++ +|++++||+||||++|++|+
T Consensus 317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~ 395 (479)
T cd07116 317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFK 395 (479)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeC
Confidence 9999999999999999999999999999999999997642 258999999998874 99999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|++
T Consensus 396 ~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~ 475 (479)
T cd07116 396 DEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNL 475 (479)
T ss_pred CHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999998877778899999999999999999999999999999
Q ss_pred EEe
Q 010735 493 VTP 495 (502)
Q Consensus 493 ~~~ 495 (502)
+++
T Consensus 476 ~~~ 478 (479)
T cd07116 476 LVS 478 (479)
T ss_pred EEe
Confidence 775
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-98 Score=789.20 Aligned_cols=468 Identities=37% Similarity=0.568 Sum_probs=438.5
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++ .|+.+|.++|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE 79 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999875668899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
|++++++|+|||..++ ..|+..+++.+++++...+...++..+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 158 (478)
T cd07085 80 LARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP 158 (478)
T ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 9999999999999975 5799999999999988766555544332 2234568999999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
+||++||+||+|||+.+|+++..++++|.++|+|+|+++++++ +.+.++.|+.||++|.|.||||+.+|+.|++.++ .
T Consensus 159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa-~ 236 (478)
T cd07085 159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA-A 236 (478)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-h
Confidence 9999999999999999999999999999999999999999998 4567899999999999999999999999999887 7
Q ss_pred CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (502)
Q Consensus 262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~ 341 (502)
.++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 316 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD 316 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
+||++++.+++++.+++++++.+|+++++||.... .+|+|+.|||+.+++++|+++++|+||||++|++|+|+|||
T Consensus 317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 396 (478)
T cd07085 317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEA 396 (478)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997532 36899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC--CcchHHHHHhhhhccEEEE
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g--~~~g~~~~~~~~~~k~v~~ 494 (502)
|+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|+.
T Consensus 397 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~ 476 (478)
T cd07085 397 IAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTS 476 (478)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999987543 367899999999999 5789999999999999976
Q ss_pred e
Q 010735 495 P 495 (502)
Q Consensus 495 ~ 495 (502)
+
T Consensus 477 ~ 477 (478)
T cd07085 477 R 477 (478)
T ss_pred e
Confidence 5
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-98 Score=788.79 Aligned_cols=473 Identities=47% Similarity=0.789 Sum_probs=444.5
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (502)
Q Consensus 25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (502)
||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+++.|+.++..+|.++|++++++|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 68999987656788999999999999999999999999999999999962249999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHH
Q 010735 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184 (502)
Q Consensus 105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 184 (502)
+++++|+|||..++. .|+..+++.+++++.+.++..+...+...+...+++++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 999999999999764 6999999999999988876555443333445578999999999999999999999999999999
Q ss_pred HcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCC
Q 010735 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264 (502)
Q Consensus 185 aaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~ 264 (502)
++||+||+|||+.+|.++.+++++|.++|+|+|+++++++++.+.++.|+.||++|.|.||||+++|+.|+++++ .+++
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~ 238 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVK 238 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCC
Confidence 999999999999999999999999999999999999999877678999999999999999999999999999987 7889
Q ss_pred ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccc
Q 010735 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344 (502)
Q Consensus 265 ~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp 344 (502)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp 318 (482)
T cd07119 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP 318 (482)
T ss_pred cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 345 QVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 345 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++++.+++++++++++++++|+++++||.... ..|+|+.|||+.+++++|+++++|+||||++|++|+|+||||++
T Consensus 319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 398 (482)
T cd07119 319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRL 398 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHH
Confidence 99999999999999999999999999997542 25899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCCC
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 499 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~ 499 (502)
+|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|++++++...
T Consensus 399 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~~~~ 477 (482)
T cd07119 399 ANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININLSPQ 477 (482)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEecCCC
Confidence 9999999999999999999999999999999999998777788999999999999999999999999999999887543
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-98 Score=784.35 Aligned_cols=471 Identities=45% Similarity=0.770 Sum_probs=442.3
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.+|.++|.++|++++++|+++.++
T Consensus 21 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 100 (494)
T PRK09847 21 RLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEE 100 (494)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 57999999987667889999999999999999999999999999999999721499999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||++.+++++++
T Consensus 101 la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 180 (494)
T PRK09847 101 LALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGP 180 (494)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHHH
Confidence 99999999999998765669999999999999988776555433333344678999999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.|+++|.|.||||+.+|+.|.+.++...
T Consensus 181 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~ 260 (494)
T PRK09847 181 ALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSN 260 (494)
T ss_pred HHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhC
Confidence 99999999999999999999999999999999999999999977788999999999999999999999999999876347
Q ss_pred CCceEEecCCCCceEEccCC-CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735 263 LKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (502)
Q Consensus 263 ~~~~~~e~gG~~~~iV~~da-dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~ 341 (502)
++|+++|+|||||.||.+|+ |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++.+++|+|.++++.
T Consensus 261 ~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 340 (494)
T PRK09847 261 MKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATT 340 (494)
T ss_pred CCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 89999999999999999997 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 421 (502)
+||++++.+++++.+++++++.+| ++++||.... .+.|++|||+.++++++++++||+||||++|++|+|++|||+++
T Consensus 341 ~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~-~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 418 (494)
T PRK09847 341 MGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAG-LAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLA 418 (494)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCC-CCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHH
Confidence 999999999999999999999999 9999987643 57899999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|+++|||+++|||+|.+.+.++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 419 n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 492 (494)
T PRK09847 419 NDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS 492 (494)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999877777899999999999999999999999999999764
|
|
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-98 Score=784.86 Aligned_cols=467 Identities=34% Similarity=0.563 Sum_probs=439.3
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (502)
+||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL 77 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999864 67899999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
++++++|+|||..++ ..|+..+++.+++++...+.+.+...+.. .+...+++++|+|||++|+|||||+...++++++
T Consensus 78 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 78 GRLVSLEMGKILPEG-LGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred HHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 999999999999975 46999999999999988877655433321 2335678999999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
||++||+||+|||+.+|.++..+++++.++ |+|+|+++++++++. ++..|..||++|.|.||||+.+|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999998654 889999999999999999999999999988
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+ .+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 236 a-~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 314 (478)
T cd07086 236 A-RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE 314 (478)
T ss_pred h-ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 7 788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC--CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 416 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 416 (502)
++++||++++.+++++.+++++|+.+|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 315 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~de 394 (478)
T cd07086 315 GTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEE 394 (478)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHH
Confidence 999999999999999999999999999999999976543 589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhh--cceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 417 AIKSANNTRYGLAAGIMTKDLNVANTVSRS--IRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
||+++|+++|||+++|||+|.+.+++++++ +++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 395 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~ 474 (478)
T cd07086 395 AIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCT 474 (478)
T ss_pred HHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEE
Confidence 999999999999999999999999999999 9999999999765 4478999999999999999999999999999998
Q ss_pred Eec
Q 010735 494 TPI 496 (502)
Q Consensus 494 ~~~ 496 (502)
+++
T Consensus 475 ~~~ 477 (478)
T cd07086 475 INY 477 (478)
T ss_pred EeC
Confidence 764
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-98 Score=784.27 Aligned_cols=465 Identities=42% Similarity=0.695 Sum_probs=437.1
Q ss_pred ceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
++||||+|+.+. ..++++||+ ||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 2 ~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 77 (473)
T cd07097 2 RNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARKE 77 (473)
T ss_pred CceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 579999999752 357999999 5999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||+.++ ..|+..+++.+++++...++..+...+. ..+...+++++|+|||++|+|||||+.++++++
T Consensus 78 ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i 156 (473)
T cd07097 78 ELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156 (473)
T ss_pred HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence 99999999999999976 4699999999999998877665543322 134456899999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+++..|+.|+++|.|.||||+.+|+.|++.++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa- 235 (473)
T cd07097 157 APALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA- 235 (473)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999977778999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 236 ~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 315 (473)
T cd07097 236 ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGV 315 (473)
T ss_pred ccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI 418 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 418 (502)
++|||+++.+++++.+++++++.+|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|++|||
T Consensus 316 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai 395 (473)
T cd07097 316 DIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEAL 395 (473)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHH
Confidence 999999999999999999999999999999997643 258999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCC-CcchHHHHHhhhhccEEE
Q 010735 419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~ 493 (502)
+++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+| +++|++|+++|++.|+|+
T Consensus 396 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 396 AIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999999998764 3478999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-98 Score=779.29 Aligned_cols=455 Identities=29% Similarity=0.465 Sum_probs=427.4
Q ss_pred CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Q 010735 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH 115 (502)
Q Consensus 36 ~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 115 (502)
.++++++||+||+++++++.++.+|++++++.|++||+ .|++++.++|.++|++++++|++|.++|++++++|+|||.
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 83 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI 83 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence 46789999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecC
Q 010735 116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195 (502)
Q Consensus 116 ~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps 195 (502)
.++ ..|+..+++.+++++...+...+.......+...+++++|+|||++|+|||||++.+++++++||++||+||+|||
T Consensus 84 ~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs 162 (462)
T PRK13968 84 NQA-RAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA 162 (462)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 976 4799999999999998776543322111123456889999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCc
Q 010735 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275 (502)
Q Consensus 196 ~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~ 275 (502)
+.+|+++.++++++.++|+|+|+++++++++.. ...++.||++|.|.||||+++|+.|++.++ ..++|+++|+|||||
T Consensus 163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa-~~l~~~~lElGGk~p 240 (462)
T PRK13968 163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDP 240 (462)
T ss_pred CcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEecCCCCc
Confidence 999999999999999999999999999986544 455889999999999999999999999987 789999999999999
Q ss_pred eEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHH
Q 010735 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355 (502)
Q Consensus 276 ~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~ 355 (502)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.
T Consensus 241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~ 320 (462)
T PRK13968 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELH 320 (462)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435 (502)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 435 (502)
+++++++.+|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 321 ~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~ 400 (462)
T PRK13968 321 HQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTT 400 (462)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcC
Confidence 99999999999999999765445899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 401 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 401 DETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 999999999999999999999877778899999999999999999999999999999765
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-98 Score=783.52 Aligned_cols=463 Identities=46% Similarity=0.792 Sum_probs=437.8
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (502)
Q Consensus 25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (502)
||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|++ .|+.+|.++|.++|++++++|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 78 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA 78 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999866678999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHH
Q 010735 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184 (502)
Q Consensus 105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 184 (502)
+++++|+|||..++...|+..+++.+++++..+++..+...+.......+..++|+|||++|+|||||+...++++++||
T Consensus 79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 158 (467)
T TIGR01804 79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158 (467)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999976567999999999999988776555433322223467899999999999999999999999999999
Q ss_pred HcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCC
Q 010735 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264 (502)
Q Consensus 185 aaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~ 264 (502)
++||+||+|||+.+|.++..++++|.++|+|+|+++++++++.++++.|+.|+++|.|.||||+.+|+.|.+.++ .++|
T Consensus 159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~-~~l~ 237 (467)
T TIGR01804 159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA-DHLK 237 (467)
T ss_pred hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCC
Confidence 999999999999999999999999999999999999999876788999999999999999999999999999887 7889
Q ss_pred ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccc
Q 010735 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344 (502)
Q Consensus 265 ~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp 344 (502)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 317 (467)
T TIGR01804 238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP 317 (467)
T ss_pred cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 345 QVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 345 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 318 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~ 397 (467)
T TIGR01804 318 LISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIAR 397 (467)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHH
Confidence 99999999999999999999999999997543 25899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
+|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|
T Consensus 398 ~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 398 ANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9999999999999999999999999999999999998777788999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-97 Score=786.86 Aligned_cols=470 Identities=37% Similarity=0.612 Sum_probs=441.5
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
..++||||+|+. ++.+++++||+| |+++++++.++.+|++++++.|++||+ .|+.++..+|.++|++++++|+++
T Consensus 32 ~~~~~i~g~~~~--~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 107 (512)
T cd07124 32 EYPLVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRR 107 (512)
T ss_pred ccceeECCEEec--CCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence 357899999997 357899999998 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...+++
T Consensus 108 ~~~la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 186 (512)
T cd07124 108 RFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGM 186 (512)
T ss_pred HHHHHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHH
Confidence 99999999999999999764 69999999999999988776554433333456789999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||+.+|+.|++.++
T Consensus 187 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 266 (512)
T cd07124 187 TTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAA 266 (512)
T ss_pred HHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999987
Q ss_pred cC-----CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCC
Q 010735 260 TS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (502)
Q Consensus 260 ~~-----~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 334 (502)
.. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 267 ~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~ 346 (512)
T cd07124 267 KVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGD 346 (512)
T ss_pred cccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 32 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC--CCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 335 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|.|+++++||++++.+++++.++++++.. |+++++||..+.. +|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 347 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~ 425 (512)
T cd07124 347 PEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAK 425 (512)
T ss_pred CCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecC
Confidence 99999999999999999999999999988 8999999976542 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~ 489 (502)
|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+| +++|.+|+++|+++
T Consensus 426 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~ 505 (512)
T cd07124 426 DFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQP 505 (512)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccE
Confidence 99999999999999999999999999999999999999999998764 3367899999999999 88899999999999
Q ss_pred cEEEEec
Q 010735 490 KSVVTPI 496 (502)
Q Consensus 490 k~v~~~~ 496 (502)
|+|++++
T Consensus 506 k~v~~~~ 512 (512)
T cd07124 506 KTVTENF 512 (512)
T ss_pred EEEEEeC
Confidence 9998874
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=779.76 Aligned_cols=464 Identities=31% Similarity=0.521 Sum_probs=431.4
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (502)
Q Consensus 25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (502)
+|||+|+.+ +.+++++||+||+++++++.++.+|++++++.|++|++ .|+++|.++|.++|++++++|++++++|+
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 77 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG 77 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999974 57899999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (502)
Q Consensus 105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 183 (502)
+++++|+|||..++ ..|+..+++.+++++.+.+.+.+...+.. .+...+..++|+|||++|+|||||+..+++++++|
T Consensus 78 ~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 78 KLVSLEMGKILPEG-LGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred HHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 99999999999976 57999999999999887665544333221 23445788999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCcHHHHHHHHHH----HHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 184 LAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l~~~----l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
|++||+||+|||+.+|.++..++++ |.++|+|+|++++++++ .+.++.|+.|+++|+|.||||+++|+.|++.++
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999887766 47999999999999984 457899999999999999999999999999887
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
.+.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 236 -~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 -ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred -hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||++++.+++++.+++++|+++|+++++||.....+|+|++|||+.++++ |++++||+||||++|++|+|++|||+
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~ 393 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIA 393 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999986544689999999987766 99999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhh--cceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRS--IRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
++|+++|||+++|||+|.+++++++++ +++|.|+||..+. ..+.+||||+|.||+|+++|++|+++|++.|++++++
T Consensus 394 ~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 394 WNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 473 (474)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEec
Confidence 999999999999999999999999987 8999999998654 4578999999999999999999999999999988764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-97 Score=784.01 Aligned_cols=470 Identities=28% Similarity=0.432 Sum_probs=434.7
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH-
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE- 98 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~- 98 (502)
..++||||+|+.+ +.+++++||+| |+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++
T Consensus 32 ~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 107 (522)
T cd07123 32 EIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSGK 107 (522)
T ss_pred ccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhh
Confidence 4568999999973 57899999995 999999999999999999999999999 89999999999999999999996
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCC-eEEEEEcCCChhHHhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPI-GVVGHIIPWNFPTTMF 176 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~ 176 (502)
++++|++++++|+|||+.++...|+..+++.+++++.++.+..+...+. ..+...++.++|+ |||++|+|||||+...
T Consensus 108 ~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 108 YRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred CHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHH
Confidence 8999999999999999997644578889999999998877654432221 1244568899998 9999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
.+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|++
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~ 266 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK 266 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred HHhcCCCC------ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735 257 AAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (502)
Q Consensus 257 ~aa~~~~~------~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (502)
.++ .+++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 267 ~aa-~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 345 (522)
T cd07123 267 QIG-ENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI 345 (522)
T ss_pred HHH-hhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence 987 6665 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
++|+|.|+++++||++++.+++++.++++++.++ |+++++||..+..+|+|++|||+.+++++|++++||+||||++|+
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 425 (522)
T cd07123 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVY 425 (522)
T ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEE
Confidence 9999999999999999999999999999999999 999999997654468999999999999999999999999999999
Q ss_pred EeCC--HHHHHHHHhcCC-CCceEEEecCCHHHHHHHHhhc--ceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHH
Q 010735 410 KFKT--VEEAIKSANNTR-YGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLE 481 (502)
Q Consensus 410 ~~~~--~~eai~~~n~~~-~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~ 481 (502)
+|+| ++|||+++|++. |||++||||+|.+.++++++++ ++|.|+||+.... .+.+||||+|.||+| +++|++
T Consensus 426 ~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~ 505 (522)
T cd07123 426 VYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPL 505 (522)
T ss_pred EeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHH
Confidence 9994 799999999985 9999999999999999999997 5999999987653 367899999999996 999999
Q ss_pred HHHhhhhccEEEEec
Q 010735 482 SLHNYLQVKSVVTPI 496 (502)
Q Consensus 482 ~~~~~~~~k~v~~~~ 496 (502)
++++|++.|+++...
T Consensus 506 ~l~~~~~~k~~~~~~ 520 (522)
T cd07123 506 NLLRWVSPRTIKETF 520 (522)
T ss_pred HHHHhcceEEEEEec
Confidence 999999999997754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-97 Score=783.76 Aligned_cols=473 Identities=27% Similarity=0.420 Sum_probs=437.2
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE- 97 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~- 97 (502)
...++||||+|+.+ ++.+++++||+| |+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~~ 106 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLSG 106 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHh
Confidence 55678999999975 456899999997 899999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee-ecccccccceeecCC-eEEEEEcCCChhHHh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPI-GVVGHIIPWNFPTTM 175 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~ 175 (502)
+++++|++++++|+|||+.++...++..+++.+++++.++++..+... ....+..+++.++|+ |||++|+|||||+..
T Consensus 107 ~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~ 186 (533)
T TIGR01236 107 PYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIA 186 (533)
T ss_pred hcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHH
Confidence 599999999999999999976433499999999999988876654332 112344578899999 999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
..+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|+
T Consensus 187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999 7999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhcCCCC------ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc
Q 010735 256 QAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 329 (502)
Q Consensus 256 ~~aa~~~~~------~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~ 329 (502)
+.++ ..++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 266 ~~aa-~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVA-SNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE 344 (533)
T ss_pred HHHH-hhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence 9987 6665 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC--CEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEE
Q 010735 330 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG--ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 407 (502)
Q Consensus 330 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G--a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 407 (502)
+++|+|.|+++++||++++.+++++.++++++..+| +++++||......|+|++|||+.+++++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 999999999999999999999999999999999987 799999976544689999999999999999999999999999
Q ss_pred EEEeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC--CCCCCCcCCCCCCCCC-Ccch
Q 010735 408 LMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCG 479 (502)
Q Consensus 408 v~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g 479 (502)
|++|+| ++|||+++ |+++|||+++|||+|.+.+.+++++++ +|.|+||+... ..+.+||||+|.||+| +++|
T Consensus 425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g 504 (533)
T TIGR01236 425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGG 504 (533)
T ss_pred EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCC
Confidence 999998 59999999 889999999999999999999999977 99999998654 3368899999999998 9999
Q ss_pred HHHHHhhhhccEEEEecC
Q 010735 480 LESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 480 ~~~~~~~~~~k~v~~~~~ 497 (502)
.+|+++|++.|+++....
T Consensus 505 ~~~l~~f~~~k~v~~~~~ 522 (533)
T TIGR01236 505 PLNLLRWTSARSIKETFV 522 (533)
T ss_pred HHHHHHhcceEEEEEEcc
Confidence 999999999999987653
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-97 Score=774.37 Aligned_cols=451 Identities=32% Similarity=0.538 Sum_probs=425.6
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (502)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~ 118 (502)
++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||+.++
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 80 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA 80 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence 78899999999999999999999999999999999 8999999999999999999999999999999999999999976
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecC
Q 010735 119 KMGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195 (502)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps 195 (502)
..|+..+++.+++++..+++..+..... ......+++++|+|||++|+|||||++.+++++++||++||+||+|||
T Consensus 81 -~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 81 -KAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 5699999999999998876654332111 122356788999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCc
Q 010735 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275 (502)
Q Consensus 196 ~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~ 275 (502)
+.+|+++.++++++.++|+|+|+++++++ +.+.+..|+.|++++.|+||||+++|+.|++.++ ..+||+++|+|||||
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~-~~~~~~~lElGG~~~ 237 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG-DEIKKTVLELGGSDP 237 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-hcCCceeeecCCCCe
Confidence 99999999999999999999999999986 3456788999999999999999999999999877 789999999999999
Q ss_pred eEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHH
Q 010735 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355 (502)
Q Consensus 276 ~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~ 355 (502)
+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~ 317 (457)
T PRK09406 238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE 317 (457)
T ss_pred eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435 (502)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 435 (502)
+++++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+
T Consensus 318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 397 (457)
T PRK09406 318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTR 397 (457)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 99999999999999999875557999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 99999999999999999999988777889999999999999999999999999999864
|
|
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-97 Score=778.13 Aligned_cols=465 Identities=43% Similarity=0.696 Sum_probs=440.3
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (502)
Q Consensus 25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (502)
||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|++ .|+.+|.++|.++|++++++|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 78 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA 78 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999765678999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (502)
Q Consensus 105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 183 (502)
+++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus 79 ~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 79 KLIVEEQGKTLSLA-RVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred HHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 99999999999975 57999999999999988876655443322 24567889999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 263 (502)
|++||+||+|||+.+|.++..++++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|++.++ .++
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa-~~~ 236 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENI 236 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcC
Confidence 9999999999999999999999999999999999999999977678899999999999999999999999999987 789
Q ss_pred CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccc
Q 010735 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343 (502)
Q Consensus 264 ~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~g 343 (502)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHh
Q 010735 344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSAN 422 (502)
Q Consensus 344 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 422 (502)
|++++.+++++.+++++++.+|+++++||..+. ..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|
T Consensus 317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 396 (468)
T cd07088 317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAN 396 (468)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHh
Confidence 999999999999999999999999999997653 3689999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 423 NTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 423 ~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+++|||+++|||+|.+.++++++++++|.|+||++....+..||||+|.||+|+++|++|+++||+.|+|+
T Consensus 397 ~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 397 DSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999998776667799999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-97 Score=776.72 Aligned_cols=462 Identities=42% Similarity=0.693 Sum_probs=436.1
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (502)
+||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+ .|+.+|.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l 78 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL 78 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999876678899999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (502)
Q Consensus 104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 183 (502)
++++++|+|||..++...|+..+++.+++++...+...+... ....+..++|+|||++|+|||||+..+++++++|
T Consensus 79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999877656899999999999887766543221 2245678999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 263 (502)
|++||+||+|||+.+|+++..++++|.++|+|+|+++++++++.++++.|+.||+++.|.||||+.+|+.|.+.++ .++
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~ 233 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAA-DTV 233 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccC
Confidence 9999999999999999999999999999999999999999977778999999999999999999999999999987 778
Q ss_pred CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccc
Q 010735 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343 (502)
Q Consensus 264 ~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~g 343 (502)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|
T Consensus 234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 313 (466)
T cd07138 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG 313 (466)
T ss_pred CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 344 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
|++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 314 pli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 393 (466)
T cd07138 314 PLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAI 393 (466)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHH
Confidence 999999999999999999999999999996432 25899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+|+++|||+++|||+|.+.++++++++++|+|+||+.. ..+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 394 ~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 394 ANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999999999999864 5678999999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-97 Score=773.77 Aligned_cols=461 Identities=39% Similarity=0.629 Sum_probs=434.2
Q ss_pred CeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 010735 28 GEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE 107 (502)
Q Consensus 28 G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~ 107 (502)
|+|+.+.++..++++||+||+++++++.++.+|++++++.|++|++ .|+.++..+|.++|++++++|++++++|++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 78 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL 78 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 6787765667899999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHc
Q 010735 108 ALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAA 186 (502)
Q Consensus 108 ~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaa 186 (502)
++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+++++|+|||++|+|||||++..++++++||++
T Consensus 79 ~~e~Gk~~~~a-~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 157 (465)
T cd07151 79 IRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL 157 (465)
T ss_pred HHHcCCCHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence 99999999975 46999999999999987766654433321 34557789999999999999999999999999999999
Q ss_pred CCeEEEecCCCcHHHH-HHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCc
Q 010735 187 GCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 265 (502)
Q Consensus 187 GN~vv~kps~~~~~~~-~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~ 265 (502)
||+||+|||+.+|.++ ..+.+++.++|+|+|++|++++++.+++..|+.||.++.|.||||+.+|+.|++.++ .+++|
T Consensus 158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~ 236 (465)
T cd07151 158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAG-RHLKK 236 (465)
T ss_pred CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCc
Confidence 9999999999999996 689999999999999999999877778899999999999999999999999999987 78999
Q ss_pred eEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 010735 266 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345 (502)
Q Consensus 266 ~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl 345 (502)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++.+||+
T Consensus 237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 316 (465)
T cd07151 237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL 316 (465)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCC
Q 010735 346 VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425 (502)
Q Consensus 346 ~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 425 (502)
+++.+++++.+++++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 317 i~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 393 (465)
T cd07151 317 INESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTE 393 (465)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCC
Confidence 99999999999999999999999999964 589999999999999999999999999999999999999999999999
Q ss_pred CCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 426 YGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 426 ~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|||+++|||+|.++++++++++++|.|+||+.+.. .+.+||||+|.||+|+++|++|+++|++.|+++++
T Consensus 394 ~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 394 YGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred ccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999999999999999999999999999998765 46899999999999999999999999999998764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-97 Score=772.77 Aligned_cols=459 Identities=44% Similarity=0.735 Sum_probs=434.2
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
....++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|+++|+ .|+.+|.++|.++|++++++|++
T Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~ 96 (480)
T cd07111 19 DRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQK 96 (480)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4456789999999865567899999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
+.++|++++++|+|||+.++...|+..+++.+++++.+.+... ..+..++|+|||++|+|||||+...++
T Consensus 97 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~----------~~~~~~~P~GVV~~I~PwN~P~~~~~~ 166 (480)
T cd07111 97 HQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD----------TELAGWKPVGVVGQIVPWNFPLLMLAW 166 (480)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCcccceecceEEEECCCccHHHHHHH
Confidence 9999999999999999997755689999999998887765432 124568999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++ +.+..|+.|+++|.|.||||+.+|+.|.+.+
T Consensus 167 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~a 245 (480)
T cd07111 167 KICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRAT 245 (480)
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999855 6789999999999999999999999999998
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+ ..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus 246 a-~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 324 (480)
T cd07111 246 A-GTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDK 324 (480)
T ss_pred h-ccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI 418 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 418 (502)
++++||++++.+++++.+++++++.+|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|++|||
T Consensus 325 ~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai 404 (480)
T cd07111 325 AIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAV 404 (480)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHH
Confidence 99999999999999999999999999999999987544468999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccE
Q 010735 419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491 (502)
Q Consensus 419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~ 491 (502)
+++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+|+++|++.|+
T Consensus 405 ~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 405 ALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999987777889999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-97 Score=775.39 Aligned_cols=467 Identities=42% Similarity=0.731 Sum_probs=437.0
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (502)
+||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.+|.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999865567899999999999999999999999999999999998212999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCee-eecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
++++++|+|||..++...|+..+++.+++++..++...+.. .+...+...+..++|+|||++|+|||||+...++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 99999999999987666699999999999998876554322 22222345678999999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|+++..+.++|.++|+|+|+++++++ +.+.+..|+.|++++.|.||||+.+|+.|++.++ .+
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~-~~ 238 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ER 238 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hc
Confidence 999999999999999999999999999999999999999998 5568899999999999999999999999999887 78
Q ss_pred CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcc
Q 010735 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342 (502)
Q Consensus 263 ~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~ 342 (502)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++
T Consensus 239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (471)
T cd07139 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI 318 (471)
T ss_pred CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 343 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
||++++.+++++.+++++++.+|+++++||.... ..|+|+.|||+.++++++++++||+||||++|++|+|+||||++
T Consensus 319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 398 (471)
T cd07139 319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI 398 (471)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHH
Confidence 9999999999999999999999999999997643 35899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+|+++|||+++|||+|.+.+.++++++++|.|+||++. ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 399 ~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999976 5678999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-96 Score=773.70 Aligned_cols=467 Identities=31% Similarity=0.470 Sum_probs=431.9
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
.+||||+|+.+ ++.+++++||+||+++++++.++.+|++++++.|++||+ .|+.+|..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE 78 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence 37999999975 467899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|++++++|+|||..++ ..|+..+++.+++++.+.....+.......+...+++++|+|||++|+|||||+..+++++++
T Consensus 79 la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 79 LAEVIARETGKPLWEA-ATEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred HHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 9999999999999976 469999999999888776554443332223445688999999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|.++..+++++.++|+|+|+++++++ +.+.++.|+.||++|.|.||||+++|+.|++.++...
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999998 5678999999999999999999999999999876455
Q ss_pred CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccH-HHHHHHHHHHHhccccCCCC-CCCC
Q 010735 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPF-DPAV 340 (502)
Q Consensus 263 ~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~-~~~~ 340 (502)
.+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|. ++++
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 678999999999999999999999999999999999999999999999999998 99999999999999999996 7889
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++||+++..+++++.+++++++.+|+++++||.....+|.|++|||+ +++++|++++||+||||++|++|+|+||||++
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~ 395 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRL 395 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999988654446899999999 79999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
+|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|..+ .+|++.|+++...
T Consensus 396 ~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 396 ANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence 999999999999999999999999999999999998755 34678999999999999999555 5599999998875
|
|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-96 Score=775.73 Aligned_cols=469 Identities=42% Similarity=0.696 Sum_probs=440.4
Q ss_pred eeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
+||||+|+.++++.+++++||+| ++++++++.++.+|++++++.|++|++ .|+.++.++|.++|++++++|.+++++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e 78 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE 78 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999765678999999999 689999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
|++++++|+|||+.++ ..|+..+++.+++++...+...+...+.. .+...+.+++|+|||++|+|||||+..++++++
T Consensus 79 la~~~~~e~Gk~~~~~-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 157 (478)
T cd07131 79 LARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF 157 (478)
T ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence 9999999999999976 46999999999999888776555433321 233568999999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
+||++||+||+|||+.+|+++..++++|.++|+|+|+++++++++.++++.|+.||++|.|+||||+.+|+.|++.++ .
T Consensus 158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa-~ 236 (478)
T cd07131 158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCA-R 236 (478)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-h
Confidence 999999999999999999999999999999999999999999977778999999999999999999999999999887 7
Q ss_pred CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (502)
Q Consensus 262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~ 341 (502)
.++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
+||++++.+++++++++++|+.+|+++++||.... .+|+|+.|||+.+++++++++++|+||||++|++|+|+|||
T Consensus 317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea 396 (478)
T cd07131 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEA 396 (478)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997542 36899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC-CcchHHHHHhhhhccEEEEe
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~~~ 495 (502)
|+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|.+|+++|++.|+|+++
T Consensus 397 i~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 397 IEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 9999999999999999999999999999999999999997663 578999999999999 88899999999999999876
Q ss_pred c
Q 010735 496 I 496 (502)
Q Consensus 496 ~ 496 (502)
+
T Consensus 477 ~ 477 (478)
T cd07131 477 Y 477 (478)
T ss_pred C
Confidence 4
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-97 Score=778.88 Aligned_cols=470 Identities=31% Similarity=0.564 Sum_probs=438.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
..++||||+|+.+ +.++.++||+| |+++++++.++.+|++++++.|++|++ .|+.+|.++|.++|++++++|+++
T Consensus 32 ~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 107 (511)
T TIGR01237 32 TYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMERR 107 (511)
T ss_pred ccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence 4468999999974 56799999994 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
+++|++++++|+|||+.++ ..|+..+++.+++++.+++...+...+. ..+...+++++|+|||++|+|||||+..+++
T Consensus 108 ~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~ 186 (511)
T TIGR01237 108 RHELNALICLEVGKIIPEA-DAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVG 186 (511)
T ss_pred HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHH
Confidence 9999999999999999975 5699999999999998887665433221 2344578889999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.||+++.|.||||+.+|+.|++.+
T Consensus 187 ~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 266 (511)
T TIGR01237 187 MTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDA 266 (511)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997777899999999999999999999999999987
Q ss_pred hc-----CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 259 AT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 259 a~-----~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
+. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 267 a~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g 346 (511)
T TIGR01237 267 AKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVG 346 (511)
T ss_pred hcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCC
Confidence 63 3789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
+|.++++++||++++.+++++.+++++++++| ++++||......|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 347 ~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 347 PTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 99999999999999999999999999999999 89999876544689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCCC-cchHHHHHhhhhcc
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVK 490 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g~-~~g~~~~~~~~~~k 490 (502)
+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+ ++|++++++|++.|
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k 505 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPK 505 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceE
Confidence 99999999999999999999999999999999999999999997653 3568999999999995 78999999999999
Q ss_pred EEEEec
Q 010735 491 SVVTPI 496 (502)
Q Consensus 491 ~v~~~~ 496 (502)
+++.++
T Consensus 506 ~v~~~~ 511 (511)
T TIGR01237 506 TVTENI 511 (511)
T ss_pred EEEEeC
Confidence 998764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-97 Score=769.13 Aligned_cols=446 Identities=40% Similarity=0.682 Sum_probs=422.5
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++.++++|++|++ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++ .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~ 77 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEA-K 77 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-H
Confidence 479999999999999999999999999999999 8999999999999999999999999999999999999999975 5
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~ 199 (502)
.|+..+++.+++++...++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (448)
T TIGR01780 78 GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP 157 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence 7999999999999887766655433322 334456788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCC-chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEE
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~-~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV 278 (502)
+++..++++|.++|+|+|++|+++++ +.+.++.|+.||+++.|.||||+.+|+.|++.++ ..++|+++|+|||||+||
T Consensus 158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa-~~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeEE
Confidence 99999999999999999999999996 6778899999999999999999999999999987 778999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHH
Q 010735 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358 (502)
Q Consensus 279 ~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 358 (502)
++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 010735 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438 (502)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~ 438 (502)
++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~ 396 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA 396 (448)
T ss_pred HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 99999999999999765446899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 439 ~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
.++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|
T Consensus 397 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 397 TIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 9999999999999999998777778999999999999999999999999976
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-96 Score=774.30 Aligned_cols=470 Identities=34% Similarity=0.562 Sum_probs=436.9
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
...++||||+|+.+ +.+++++||+ ||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|++++++|++
T Consensus 35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 110 (514)
T PRK03137 35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRR 110 (514)
T ss_pred cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 34568999999974 5789999999 6999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhc-CeeeecccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH-GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+.++|++++++|+|||+.++ ..|+..+++.+++++..+++.. +.......+...+++++|+|||++|+|||||+..++
T Consensus 111 ~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~ 189 (514)
T PRK03137 111 RKHEFSAWLVKEAGKPWAEA-DADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMA 189 (514)
T ss_pred CHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence 99999999999999999976 4699999999999998876653 222222234567889999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.||+++.|.||||+.+|+.|++.
T Consensus 190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 269 (514)
T PRK03137 190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYER 269 (514)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777789999999999999999999999999999
Q ss_pred Hhc-----CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 258 aa~-----~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
++. .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 270 aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~ 349 (514)
T PRK03137 270 AAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTV 349 (514)
T ss_pred HhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence 862 168999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+|.++. ++||++++.+++++.++++++.++ +++++||..+..+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 350 g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 427 (514)
T PRK03137 350 GNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427 (514)
T ss_pred CCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecC
Confidence 9999998 999999999999999999999887 59999997654468999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~ 489 (502)
|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+| +++|.+++++|++.
T Consensus 428 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~ 507 (514)
T PRK03137 428 DFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQA 507 (514)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceE
Confidence 999999999999999999999999999999999999999999987543 356899999999999 69999999999999
Q ss_pred cEEEEec
Q 010735 490 KSVVTPI 496 (502)
Q Consensus 490 k~v~~~~ 496 (502)
|+|+..+
T Consensus 508 k~v~~~~ 514 (514)
T PRK03137 508 KTVSEMF 514 (514)
T ss_pred EEEEEeC
Confidence 9987653
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-96 Score=765.99 Aligned_cols=461 Identities=31% Similarity=0.527 Sum_probs=429.4
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|+++++ .++..+|.++|++++++|+++.+
T Consensus 4 ~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~~ 76 (472)
T TIGR03250 4 EALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARKE 76 (472)
T ss_pred CCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999986 357899999999999999999999999999999988764 57899999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-----ccccccceeecCC-eEEEEEcCCChhHHh
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPI-GVVGHIIPWNFPTTM 175 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~ 175 (502)
+|++++++|+|||..++ ..|+..+++.+++++..+.+..+...+. ..+...++.++|+ |||++|+|||||++.
T Consensus 77 ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~ 155 (472)
T TIGR03250 77 EISDLITLESGLSKKDS-LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQ 155 (472)
T ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHH
Confidence 99999999999999975 5699999999999998876654433211 1223467899998 999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
+++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++.+.+.+..|+.||+++.|.||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 235 (472)
T TIGR03250 156 VAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIA 235 (472)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997677899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 236 ~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 312 (472)
T TIGR03250 236 ARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDP 312 (472)
T ss_pred HHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence 9864 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415 (502)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 415 (502)
.++++++||++++.+++++++++++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|.+
T Consensus 313 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 389 (472)
T TIGR03250 313 MDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDID 389 (472)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHH
Confidence 999999999999999999999999999999999999965 58999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCC-CcchHHHHHhhhhccEEE
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~ 493 (502)
||++++|+++|||++||||+|.++++++++++++|+|+||+..... +.+||||+|.||+| +++|.+|+++|++.|+++
T Consensus 390 eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~ 469 (472)
T TIGR03250 390 DAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYS 469 (472)
T ss_pred HHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999876544 56899999999999 577899999999999998
Q ss_pred Eec
Q 010735 494 TPI 496 (502)
Q Consensus 494 ~~~ 496 (502)
+++
T Consensus 470 ~~~ 472 (472)
T TIGR03250 470 LPW 472 (472)
T ss_pred EeC
Confidence 764
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-96 Score=762.22 Aligned_cols=450 Identities=40% Similarity=0.659 Sum_probs=424.1
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++++++.|++||+.+.|+. +..+|.++|++++++|++|+++|++++++|+|||..++ .
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~ 78 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEA-R 78 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-H
Confidence 479999999999999999999999999999998212998 99999999999999999999999999999999999976 4
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~ 200 (502)
.|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 79 ~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 79 FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 69999999999999888776554433223445689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735 201 IALYFAHLAKL-AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (502)
Q Consensus 201 ~~~~l~~~l~~-aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~ 279 (502)
++..++++|.+ +|+|+|+++++++++.++++.|+.||+++.|.||||+.+|+.|++.++ .++||+++|+|||||+||+
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~~~IV~ 237 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPCIVF 237 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeeEEC
Confidence 99999999999 799999999999877778999999999999999999999999999987 7789999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (502)
Q Consensus 280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 359 (502)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus 238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 317 (455)
T cd07120 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE 317 (455)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735 360 HGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436 (502)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d 436 (502)
+++++|+++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d 397 (455)
T cd07120 318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRD 397 (455)
T ss_pred HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999875433 258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 437 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+.|+++
T Consensus 398 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 398 LARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 999999999999999999998877788999999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-95 Score=766.06 Aligned_cols=468 Identities=32% Similarity=0.503 Sum_probs=437.1
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++|++ .|+++|.++|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE 79 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999765678999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
|+++++.|+|||+.++ ..|+..+++.+++++.......+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 80 IAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred HHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 9999999999999975 57999999999999887766555433221 234467889999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
+||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++ +.+.++.|+.||+|+.|+||||+.+|+.|.+.++ .
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~-~ 236 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS-A 236 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH-h
Confidence 9999999999999999999999999999999999999999998 4567889999999999999999999999999877 7
Q ss_pred CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341 (502)
Q Consensus 262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~ 341 (502)
.+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~ 315 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE 315 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 889999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
+||++++.+++++.+++++++++|+++++||.... .+|+|+.|||+.+++++|+++++|+||||++|++|+|++||
T Consensus 316 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ea 395 (477)
T TIGR01722 316 MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEA 395 (477)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997531 25899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC--CcchHHHHHhhhhccEEEE
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g--~~~g~~~~~~~~~~k~v~~ 494 (502)
|+++|+++|||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+| +++|.+|+++|++.|++++
T Consensus 396 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~ 475 (477)
T TIGR01722 396 IALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTT 475 (477)
T ss_pred HHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEE
Confidence 9999999999999999999999999999999999999986543 367899999999999 5889999999999999987
Q ss_pred ec
Q 010735 495 PI 496 (502)
Q Consensus 495 ~~ 496 (502)
++
T Consensus 476 ~~ 477 (477)
T TIGR01722 476 RW 477 (477)
T ss_pred eC
Confidence 63
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-96 Score=769.77 Aligned_cols=469 Identities=31% Similarity=0.555 Sum_probs=437.8
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
...++||||+|+.+ +.+++++||+ ||+++++++.++.+|++++++.|++||+ .|+.+|.++|.++|++++++|++
T Consensus 17 ~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 92 (500)
T cd07083 17 RAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADLLRR 92 (500)
T ss_pred ccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 34578999999973 5789999998 6999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee--ecccccccceeecCCeEEEEEcCCChhHHhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
+.++|++++++|+|||+.+ ...|+..+++.++++++++.+..+... +...+...++.++|+|||++|+|||||+...
T Consensus 93 ~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 171 (500)
T cd07083 93 RRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIF 171 (500)
T ss_pred CHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHH
Confidence 9999999999999999997 467999999999999998876554321 1223455678899999999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+++..|+.|+++|.|.||||+.+|+.|.+
T Consensus 172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~ 251 (500)
T cd07083 172 TGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYE 251 (500)
T ss_pred HHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred HHhcCCC------CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735 257 AAATSNL------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (502)
Q Consensus 257 ~aa~~~~------~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (502)
.++ .+. +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++
T Consensus 252 ~aa-~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 330 (500)
T cd07083 252 AAA-RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERL 330 (500)
T ss_pred HHh-hccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcC
Confidence 887 554 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEE
Q 010735 331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (502)
Q Consensus 331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 410 (502)
++|+|.++++++||++++.++++++++++++...| ++++||..+...|+|+.|||+.+++++|++++||+||||++|++
T Consensus 331 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 409 (500)
T cd07083 331 SVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIR 409 (500)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEE
Confidence 99999999999999999999999999999999887 99999976555689999999999999999999999999999999
Q ss_pred eC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCC--CCCCcCCCCCCCCC-CcchHHHHHh
Q 010735 411 FK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD--SDCPYGGYKMSGFG-RDCGLESLHN 485 (502)
Q Consensus 411 ~~--~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfgG~~~SG~g-~~~g~~~~~~ 485 (502)
|+ |++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+..... +.+||||+|.||+| +++|++++++
T Consensus 410 ~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~ 489 (500)
T cd07083 410 YKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRR 489 (500)
T ss_pred eCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHH
Confidence 99 9999999999999999999999999999999999999999999976533 57899999999999 6889999999
Q ss_pred hhhccEEEEe
Q 010735 486 YLQVKSVVTP 495 (502)
Q Consensus 486 ~~~~k~v~~~ 495 (502)
|++.|+++..
T Consensus 490 ~~~~k~~~~~ 499 (500)
T cd07083 490 FLEMKAVAER 499 (500)
T ss_pred hhheeEEEEc
Confidence 9999998754
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-95 Score=766.90 Aligned_cols=467 Identities=30% Similarity=0.464 Sum_probs=434.2
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
...++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~ 91 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH 91 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 456789999999765678899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC--eeeec---c---cccccceeecCCeEEEEEcCCCh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--EVLKM---S---RALQGYTLREPIGVVGHIIPWNF 171 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~--~~~~~---~---~~~~~~~~~~P~Gvv~~i~p~n~ 171 (502)
+++|++++++|+|||..++ ..|+..+++.+++++..+.+..+ ..... + .+...+++++|+|||++|+||||
T Consensus 92 ~~el~~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~ 170 (496)
T PLN00412 92 KAPIAECLVKEIAKPAKDA-VTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY 170 (496)
T ss_pred HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence 9999999999999999976 57999999999999876654422 11111 1 12234678999999999999999
Q ss_pred hHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHH
Q 010735 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (502)
Q Consensus 172 P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g 251 (502)
|+..+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.++.|..||++|.|.|||| .+|
T Consensus 171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g 249 (496)
T PLN00412 171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249 (496)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999877778999999999999999999 999
Q ss_pred HHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (502)
Q Consensus 252 ~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (502)
+.|++.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 250 ~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 250 IAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 99998864 789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEe
Q 010735 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (502)
Q Consensus 332 ~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 411 (502)
+|+|.+ ++++||++++.+++++.+++++++.+|+++++||.. .|+|+.|||+.++++++++++||+||||++|++|
T Consensus 327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 999987 789999999999999999999999999999998753 6899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++|+++|++.|
T Consensus 403 ~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k 482 (496)
T PLN00412 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVK 482 (496)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceE
Confidence 999999999999999999999999999999999999999999999864 4467999999999999999999999999999
Q ss_pred EEEEecC
Q 010735 491 SVVTPIF 497 (502)
Q Consensus 491 ~v~~~~~ 497 (502)
++++++.
T Consensus 483 ~i~~~~~ 489 (496)
T PLN00412 483 STVINLP 489 (496)
T ss_pred EEEEecC
Confidence 9988764
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-95 Score=762.97 Aligned_cols=450 Identities=44% Similarity=0.729 Sum_probs=426.0
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ .
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~ 77 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAM-L 77 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-H
Confidence 579999999999999999999999999999999 8999999999999999999999999999999999999999975 6
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~ 200 (502)
.|+..+++.+++++.+.+.+.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 78 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~ 157 (456)
T cd07107 78 GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL 157 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence 79999999999999877666555444433445678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~ 280 (502)
++..+++++.++ +|+|++|++++++.+.++.|+.||+++.|.||||+++|+.|++.++ .+++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~ 235 (456)
T cd07107 158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAA-EGIKHVTLELGGKNALIVFP 235 (456)
T ss_pred HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECC
Confidence 999999999996 9999999999977678899999999999999999999999999987 78999999999999999999
Q ss_pred CCCHHHHHHHHHHHH-hccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735 281 DVDVNTAADMALLGI-LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (502)
Q Consensus 281 dadl~~aa~~iv~~~-~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 359 (502)
|||++.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus 236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~ 315 (456)
T cd07107 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYID 315 (456)
T ss_pred CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHH
Confidence 999999999999995 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735 360 HGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435 (502)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 435 (502)
++.++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~ 395 (456)
T cd07107 316 SAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTN 395 (456)
T ss_pred HHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECC
Confidence 99999999999996532 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++++
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 396 DISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999887778899999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=763.83 Aligned_cols=460 Identities=26% Similarity=0.336 Sum_probs=417.3
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.++..+|.++|++++++|+++++
T Consensus 2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~ 77 (513)
T cd07128 2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE 77 (513)
T ss_pred ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999986 36789999999999999999876 8999999999997 78 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC--------eeeeccc-c-cccceeecC-CeEEEEEcCCC
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--------EVLKMSR-A-LQGYTLREP-IGVVGHIIPWN 170 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~Gvv~~i~p~n 170 (502)
+|+++ ++|+|||+.++ ..|+..+++.+++++.++++..+ +..+... + ...+++++| +|||++|+|||
T Consensus 78 ~la~l-~~e~Gkp~~ea-~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 155 (513)
T cd07128 78 DLYAL-SAATGATRRDS-WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN 155 (513)
T ss_pred HHHHH-HHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence 99996 89999999875 47999999999999998766432 2222111 1 135678999 59999999999
Q ss_pred hhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcH
Q 010735 171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249 (502)
Q Consensus 171 ~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~ 249 (502)
||++.+++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+++|++.+++..+ +++|.|.||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999998543333332 5789999999999
Q ss_pred HHHHHHHHHh-cCCCCceEEecCCCCceEEccCCC-----HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHH
Q 010735 250 VGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323 (502)
Q Consensus 250 ~g~~i~~~aa-~~~~~~~~~e~gG~~~~iV~~dad-----l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l 323 (502)
+|+.|++.++ +.+++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 9999999852 367899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------CCCCceEecEEEeeCCC--CC
Q 010735 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVTE--DM 394 (502)
Q Consensus 324 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptvl~~~~~--~~ 394 (502)
+++++++++|+|.++++++|||+++.+++++.++|+++++. +++++||... ...|+|++|||+.++++ +|
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 9999999652 13589999999998887 48
Q ss_pred cccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC---------CCCC
Q 010735 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA---------FDSD 463 (502)
Q Consensus 395 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~---------~~~~ 463 (502)
++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++++ +|+|+||+... ..+.
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~ 471 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQ 471 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCC
Confidence 999999999999999999999999999999999999999999999999999997 99999998642 2467
Q ss_pred CCcCCCCCCCCCCcc-hHHHHHhhhhccEE
Q 010735 464 CPYGGYKMSGFGRDC-GLESLHNYLQVKSV 492 (502)
Q Consensus 464 ~pfgG~~~SG~g~~~-g~~~~~~~~~~k~v 492 (502)
+||||+|.||+|+++ |.+|+++|++.|+|
T Consensus 472 ~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v 501 (513)
T cd07128 472 LVHGGPGRAGGGEELGGLRGVKHYMQRTAV 501 (513)
T ss_pred CCCCCcccCCCCcccccHHHHHHhheeeee
Confidence 899999999999994 79999999999986
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-95 Score=760.62 Aligned_cols=457 Identities=51% Similarity=0.864 Sum_probs=429.9
Q ss_pred CeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Q 010735 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (502)
Q Consensus 37 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (502)
.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 46889999999999999999999999999999999972139999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCC
Q 010735 117 WAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196 (502)
Q Consensus 117 ~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~ 196 (502)
++...|+..+++.+++++.+++...+...+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~ 161 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE 161 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence 76556999999999999998876655433332334567899999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCce
Q 010735 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (502)
Q Consensus 197 ~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~ 276 (502)
.+|.++..+++++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+++|+.|++.++..++||+++|+||+||+
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~ 241 (462)
T cd07112 162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN 241 (462)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence 99999999999999999999999999997777899999999999999999999999999987744789999999999999
Q ss_pred EEccCC-CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHH
Q 010735 277 LIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355 (502)
Q Consensus 277 iV~~da-dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~ 355 (502)
||++|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 321 (462)
T cd07112 242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVL 321 (462)
T ss_pred EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 356 SYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
++|++++++|+++++||.... ..|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 322 ~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 401 (462)
T cd07112 322 GYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVW 401 (462)
T ss_pred HHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEE
Confidence 999999999999999997642 258899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
|+|.+.+.++++++++|.|+||+++...+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 402 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 402 TSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred cCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 999999999999999999999998777788999999999999999999999999999985
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-95 Score=762.49 Aligned_cols=466 Identities=31% Similarity=0.463 Sum_probs=429.7
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (502)
+||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|++++++|++++++|
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL 77 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4899999875 467899999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (502)
Q Consensus 104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 183 (502)
++++++|+|||..++ ..|+..+++.+++++.......+.......+...++.++|+|||++|+|||||+..+++++++|
T Consensus 78 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 78 ARVIARETGKPLWET-RTEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 999999999999976 4799999999998877665544433211123346788999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 263 (502)
|++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||++|.|.||||+++|+.|++.++....
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999998 56789999999999999999999999999998763456
Q ss_pred CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccH-HHHHHHHHHHHhccccCCC-CCCCCc
Q 010735 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDP-FDPAVR 341 (502)
Q Consensus 264 ~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~-~~~~~~ 341 (502)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.+.++++++|+| .+++++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 88999999999999999999999999999999999999999999999999984 9999999999999999997 577889
Q ss_pred ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735 342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421 (502)
Q Consensus 342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 421 (502)
+||++++.+++++.+++++++++|+++++||...+..+.|++|||+ +++++|+++++|+||||++|++|+|++|||+++
T Consensus 316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~ 394 (484)
T TIGR03240 316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIA 394 (484)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999988654446899999999 689999999999999999999999999999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.++++ |++.|+++++.
T Consensus 395 n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 395 NNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 99999999999999999999999999999999998755 4467899999999999999976766 99999999885
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-95 Score=761.07 Aligned_cols=451 Identities=53% Similarity=0.895 Sum_probs=429.5
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (502)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ 121 (502)
+||+||+++++++.++.++++++++.|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 79 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRL 79 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 69999999999999999999999999999999 8999999999999999999999999999999999999999987656
Q ss_pred cHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHH
Q 010735 122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201 (502)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~ 201 (502)
|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 80 ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~ 159 (453)
T cd07115 80 DVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLS 159 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999999887765544443344567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccC
Q 010735 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281 (502)
Q Consensus 202 ~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~d 281 (502)
+..+.+++.++|+|+++++++++++.++++.|+.||++|.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|
T Consensus 160 ~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~p~iV~~d 238 (453)
T cd07115 160 ALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVFAD 238 (453)
T ss_pred HHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCeEEEecCCCCceEECCC
Confidence 9999999999999999999999977778899999999999999999999999999887 688999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 010735 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361 (502)
Q Consensus 282 adl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 361 (502)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (453)
T cd07115 239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVG 318 (453)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 010735 362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441 (502)
Q Consensus 362 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~ 441 (502)
+++|+++++||..+...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus 319 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~ 398 (453)
T cd07115 319 REEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAH 398 (453)
T ss_pred HHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHH
Confidence 99999999999765446899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 442 ~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
++++++++|.|+||+++...+.+||||+|.||+|+++|.+|+++|++.|+++++
T Consensus 399 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 399 RVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999877788899999999999999999999999999999764
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-95 Score=761.17 Aligned_cols=449 Identities=37% Similarity=0.633 Sum_probs=424.0
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (502)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~ 118 (502)
++++||+||+++++++.++.+|++++++.|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS 78 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 36789999999999999999999999999999999 8999999999999999999999999999999999999999976
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCeeeeccc-----ccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMSR-----ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (502)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k 193 (502)
. .|+..+++.+++++++++.+.+...+... +...+.+++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K 157 (456)
T cd07145 79 R-VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157 (456)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 4 69999999999999877655544332211 23456889999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (502)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~ 273 (502)
||+.+|.++..+++++.++|+|+|+++++++++.++++.|+.||+++.|.||||+++|+.|++.++ ++++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~v~lElgG~ 236 (456)
T cd07145 158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAG-GTGKKVALELGGS 236 (456)
T ss_pred CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCceEEecCCC
Confidence 999999999999999999999999999999977788999999999999999999999999999987 7899999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (502)
Q Consensus 274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 353 (502)
||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++++||++++.++++
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
+++++++++.+|+++++||..+ .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++|||
T Consensus 317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 394 (456)
T cd07145 317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF 394 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999764 38999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
|+|.+.++++++++++|+|+||+..... +.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 395 t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 395 TNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence 9999999999999999999999876543 67999999999999999999999999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-95 Score=758.66 Aligned_cols=450 Identities=40% Similarity=0.659 Sum_probs=426.4
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~ 119 (502)
++||+||+++++++.++.+|++++++.|++|++ .|+ .+|..+|.++|++++++|+++.++|++++++|+|||..++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~ 78 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR 78 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 479999999999999999999999999999999 899 99999999999999999999999999999999999998666
Q ss_pred hccHHHHHHHHHHHHHhhhhhcCee-eecc----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEec
Q 010735 120 MGDIPGAANTLRYYAGAADKIHGEV-LKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (502)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kp 194 (502)
..|+..+++.+++++..+++..+.. .+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 158 (459)
T cd07089 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP 158 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 6799999999999998877654433 2211 2445689999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC
Q 010735 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (502)
Q Consensus 195 s~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~ 274 (502)
|+.+|.++..+.++|.++|+|+|+++++++++++++..|+.||+++.|.||||+.+|+.|++.++ .++||+++|+||||
T Consensus 159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~n 237 (459)
T cd07089 159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKS 237 (459)
T ss_pred CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCC
Confidence 99999999999999999999999999999977778999999999999999999999999999987 78899999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 010735 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (502)
Q Consensus 275 ~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~ 354 (502)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEE
Q 010735 355 LSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 432 (502)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v 432 (502)
++++++++++|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v 397 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGV 397 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEE
Confidence 9999999999999999997643 26899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 433 MTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 433 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 398 ~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 398 WSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred EcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 9999999999999999999999998877788999999999999999999999999999986
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-95 Score=759.72 Aligned_cols=449 Identities=47% Similarity=0.799 Sum_probs=424.9
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++++++.|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++ .
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~ 77 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEA-A 77 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-H
Confidence 479999999999999999999999999999999 8999999999999999999999999999999999999999975 4
Q ss_pred ccHHHHHHHHHHHHHhhhhhcC---eeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCC
Q 010735 121 GDIPGAANTLRYYAGAADKIHG---EVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~ 196 (502)
.|+..+++.+++++..++++.. ...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 157 (456)
T cd07110 78 WDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE 157 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 6999999999999988776532 222221 244578899999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCce
Q 010735 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (502)
Q Consensus 197 ~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~ 276 (502)
.+|+++..+++++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+
T Consensus 158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~~~ 236 (456)
T cd07110 158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA-QDIKPVSLELGGKSPI 236 (456)
T ss_pred cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCeEEEEcCCCCee
Confidence 999999999999999999999999999977778999999999999999999999999999987 7889999999999999
Q ss_pred EEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHH
Q 010735 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 356 (502)
Q Consensus 277 iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~ 356 (502)
||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEec
Q 010735 357 YIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434 (502)
Q Consensus 357 ~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t 434 (502)
++++++.+|+++++||.... ..|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 396 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVIS 396 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999997643 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 435 KDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 435 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 397 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 397 RDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999998767788999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-95 Score=759.50 Aligned_cols=451 Identities=45% Similarity=0.771 Sum_probs=427.7
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|.++.++|++++++|+|||..++ .
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~ 77 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEA-R 77 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-H
Confidence 579999999999999999999999999999999 8999999999999999999999999999999999999999865 5
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~ 200 (502)
.|+..+++.+++++.+.+.+.+...+...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.
T Consensus 78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~ 157 (457)
T cd07090 78 VDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL 157 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence 79999999999999888776555444334556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~ 280 (502)
++..+.+++.++|+|+|+++++++++ ++++.|+.|+++|+|.||||+.+|+.|++.++ ..++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCceEEecCCCCceEECC
Confidence 99999999999999999999999854 58899999999999999999999999999987 78999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (502)
Q Consensus 281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (502)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++++||+++..+++++.+++++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCcccC-----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735 361 GKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435 (502)
Q Consensus 361 a~~~Ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 435 (502)
++.+|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~ 395 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR 395 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcC
Confidence 9999999999997532 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++++.
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 456 (457)
T cd07090 396 DLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM 456 (457)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEeC
Confidence 9999999999999999999998777788999999999999999999999999999998764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-95 Score=756.24 Aligned_cols=450 Identities=49% Similarity=0.839 Sum_probs=425.0
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (502)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ 121 (502)
+||+||+++++++.++.+|++++++.|++||+++.|+++|.++|.++|++++++|++++++|++++++|+|||..++ ..
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQA-RG 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HH
Confidence 59999999999999999999999999999998213999999999999999999999999999999999999999976 57
Q ss_pred cHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735 122 DIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (502)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~ 200 (502)
|+..+++.+++++.+.+.+.+...+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~ 160 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG 160 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 99999999999998776655443321 22345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~ 280 (502)
++..+.++|.++|+|+|+++++++++.++++.|+.|+++|.|.||||+++|+.|.+.++ .+++|+++|+|||||+||++
T Consensus 161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~n~~iV~~ 239 (454)
T cd07118 161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFA 239 (454)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEeccCCCCceEECC
Confidence 99999999999999999999999977678999999999999999999999999999987 78899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (502)
Q Consensus 281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (502)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 319 (454)
T cd07118 240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA 319 (454)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010735 361 GKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439 (502)
Q Consensus 361 a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 439 (502)
++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.
T Consensus 320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~ 399 (454)
T cd07118 320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDT 399 (454)
T ss_pred HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHH
Confidence 9999999999998654 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 400 ~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 400 ALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999998877788999999999999999999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-95 Score=750.06 Aligned_cols=431 Identities=24% Similarity=0.365 Sum_probs=400.2
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHH
Q 010735 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (502)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 135 (502)
....|+++++++|++||+ .|+.++..+|.++|++++++|++|.++|++++++|+|||..++...|+..+++.++++++
T Consensus 7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999 899999999999999999999999999999999999999987765699999999999998
Q ss_pred hhhhhcCe----eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHH
Q 010735 136 AADKIHGE----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211 (502)
Q Consensus 136 ~~~~~~~~----~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~ 211 (502)
.+++..+. ......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~ 164 (484)
T PLN02174 85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ 164 (484)
T ss_pred HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 77654441 11111233468999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHH
Q 010735 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (502)
Q Consensus 212 aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~i 291 (502)
++|+|++++++|.+ +.+..|+. +++|.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+
T Consensus 165 -~lp~gvv~vv~G~~-~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa-~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 165 -YLDSSAVRVVEGAV-TETTALLE-QKWDKIFYTGSSKIGRVIMAAAA-KHLTPVVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred -hCCCCEEEEEECCh-HHHHHHhc-ccCCEEEEECChHHHHHHHHHHH-hcCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 69999999999844 45677776 89999999999999999999987 8899999999999999999999999999999
Q ss_pred HHHHh-ccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 010735 292 LLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (502)
Q Consensus 292 v~~~~-~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (502)
++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~ 318 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY 318 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence 99999 69999999999999999999999999999999999999987 78999999999999999999997 78999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhccee
Q 010735 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 450 (502)
Q Consensus 371 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g 450 (502)
||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 319 GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG 397 (484)
T PLN02174 319 GGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAG 397 (484)
T ss_pred CCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcc
Confidence 99764 36899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCCCC--CCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 451 IIWINCYFAFD--SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 451 ~v~iN~~~~~~--~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
.|+||++.... +.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 398 ~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 398 GIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred eEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 99999976543 6789999999999999999999999999999876
|
|
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-94 Score=754.08 Aligned_cols=446 Identities=32% Similarity=0.502 Sum_probs=418.8
Q ss_pred EeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (502)
Q Consensus 40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~ 118 (502)
+++||+||+++++++.++.+|++++++.|++||+ . |+.+|.++|.++|++++++|+++.++|++++++|+|||..++
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 79 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA 79 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5789999999999999999999999999999999 6 567999999999999999999999999999999999999975
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (502)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k 193 (502)
..|+..+++.+++++..+++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 80 -~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK 158 (455)
T cd07148 80 -KVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158 (455)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence 56999999999999988776654432211 233567899999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (502)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~ 273 (502)
||+.+|+++..+++++.++|+|+|++++++++ .+.++.|+.||++|.|.||||+++|+.|++.++ . .+|+++|+|||
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa-~-~~~~~lElGG~ 235 (455)
T cd07148 159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLA-P-GTRCALEHGGA 235 (455)
T ss_pred CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh-c-CCcEEEecCCC
Confidence 99999999999999999999999999999984 467899999999999999999999999999876 4 59999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (502)
Q Consensus 274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 353 (502)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 315 (455)
T cd07148 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDR 315 (455)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
+++++++++.+|+++++||... .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 316 ~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~ 393 (455)
T cd07148 316 VEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVF 393 (455)
T ss_pred HHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999764 47899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
|+|.+.++++++++++|.|+||++.... +.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 394 t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 394 TKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 9999999999999999999999976544 56899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-96 Score=766.35 Aligned_cols=458 Identities=47% Similarity=0.775 Sum_probs=431.8
Q ss_pred EeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 010735 30 FVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL 109 (502)
Q Consensus 30 ~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~ 109 (502)
|+.+++ ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 77 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL 77 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence 677644 7799999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred HhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCe
Q 010735 110 DAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189 (502)
Q Consensus 110 e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~ 189 (502)
|+|||..++.. |+..+++.+++++++++.+.+...+...+...++.++|+|||++|+|||||++.+++++++||++||+
T Consensus 78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 156 (462)
T PF00171_consen 78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT 156 (462)
T ss_dssp HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence 99999998755 99999999999999998877766665567788999999999999999999999999999999999999
Q ss_pred EEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEe
Q 010735 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 269 (502)
Q Consensus 190 vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e 269 (502)
||+|||+.+|.++..+++++.++|+|+|+++++++++.+++..|+.||+++.|.||||+++++.|.+.++ +.++|+++|
T Consensus 157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~-~~~~~v~le 235 (462)
T PF00171_consen 157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA-KNLKPVVLE 235 (462)
T ss_dssp EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH-TTTSEEEEE
T ss_pred ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc-ccccccccc
Confidence 9999999999999999999999999999999999988899999999999999999999999999999987 889999999
Q ss_pred cCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHH
Q 010735 270 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKK 349 (502)
Q Consensus 270 ~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~ 349 (502)
+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEEeCC---cccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCC
Q 010735 350 QFDRILSYIEHGKREGATLLTGG---KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY 426 (502)
Q Consensus 350 ~~~~~~~~i~~a~~~Ga~v~~gg---~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 426 (502)
+++++.+++++++.+|+++++|| ......|+|++|||+.+++++|+++++|+||||++|++|+|++||++++|+++|
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 395 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEY 395 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSE
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCC
Confidence 99999999999999999999999 333458999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCC-CCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 427 GLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 427 gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~-~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
||+++|||+|.+.++++++++++|+|+||+++...+. +||||+|.||+|+++|.+|+++|++.|+|
T Consensus 396 gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 396 GLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp ESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred CceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 9999999999999999999999999999999875544 69999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-94 Score=754.71 Aligned_cols=448 Identities=47% Similarity=0.766 Sum_probs=423.3
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~ 119 (502)
++||+||+++++++.++.+|++++++.|++|++ .|. .+|.++|.++|++++++|.+++++|++++++|+|||..++
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a- 77 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQA- 77 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-
Confidence 479999999999999999999999999999999 776 9999999999999999999999999999999999999975
Q ss_pred hccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (502)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~ 199 (502)
..|+..+++.+++++++.++..+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|
T Consensus 78 ~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (454)
T cd07109 78 RADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 56999999999999988776655444433445678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~ 279 (502)
+++..+++++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~p~~lElgG~~~~iV~ 236 (454)
T cd07109 158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVVPVTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEECCCCCceEEC
Confidence 999999999999999999999999877778999999999999999999999999999987 7899999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (502)
Q Consensus 280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 359 (502)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~ 315 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999985 689999999999999999999
Q ss_pred HHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735 360 HGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436 (502)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d 436 (502)
+++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d 395 (454)
T cd07109 316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRD 395 (454)
T ss_pred HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCC
Confidence 99999999999987543 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCcC-CCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 437 LNVANTVSRSIRAGIIWINCYF-AFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 437 ~~~~~~~~~~l~~g~v~iN~~~-~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
.+.++++++++++|.|+||++. ...+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 396 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 396 GDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999987 45678899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-94 Score=763.50 Aligned_cols=465 Identities=36% Similarity=0.572 Sum_probs=431.9
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (502)
++|.|.|-. ++.+++++||+||+++++++.++.+|++++++.|++|++ .|+.+|.++|.++|++++++|.++.++|
T Consensus 21 ~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~el 96 (524)
T PRK09407 21 RLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLENREEL 96 (524)
T ss_pred HHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 456665544 678999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeee-c--ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
++++++|+|||..++ ..|+..+++.+++++..+++..+.... . ......+..++|+|||++|+|||||++..++++
T Consensus 97 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~ 175 (524)
T PRK09407 97 LDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDA 175 (524)
T ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHH
Confidence 999999999999975 569999999999999877655432211 1 112456889999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|+.| +|.|.||||+++|+.|++.++
T Consensus 176 ~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa- 252 (524)
T PRK09407 176 IPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG- 252 (524)
T ss_pred HHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999999999999999777788999876 789999999999999999887
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++
T Consensus 253 ~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~ 332 (524)
T PRK09407 253 RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSA 332 (524)
T ss_pred hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 333 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~ 412 (524)
T PRK09407 333 DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVE 412 (524)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHH
Confidence 999999999999999999999999999999997532 2579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC---CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA---FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~---~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 413 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 413 RANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence 9999999999999999999999999999999999999654 3467899999999999999999999999999998764
|
|
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-94 Score=752.06 Aligned_cols=445 Identities=42% Similarity=0.697 Sum_probs=420.6
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++ .
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~ 77 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEA-Q 77 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-H
Confidence 479999999999999999999999999999999 8999999999999999999999999999999999999999975 4
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~ 200 (502)
.|+..+++.+++++.... .+.......+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.
T Consensus 78 ~ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 155 (446)
T cd07106 78 FEVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL 155 (446)
T ss_pred HHHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 699999999999887653 222222223456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~ 280 (502)
++..+++++.++ +|+|+++++++ +.+.+..|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++
T Consensus 156 ~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa-~~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 156 CTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeeEEecCCCCeeEECC
Confidence 999999999996 99999999998 4468899999999999999999999999999987 78999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (502)
Q Consensus 281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (502)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 010735 361 GKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440 (502)
Q Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 440 (502)
+..+|+++++||......|+|+.|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.+++
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 392 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999999976544689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 441 ~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 393 ~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 393 EAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 99999999999999998877889999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-94 Score=755.41 Aligned_cols=448 Identities=39% Similarity=0.660 Sum_probs=425.5
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (502)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~ 118 (502)
++++||+||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|++++++|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA 78 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 35789999999999999999999999999999999 8999999999999999999999999999999999999999965
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCC
Q 010735 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (502)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~ 197 (502)
..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 -~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 157 (451)
T cd07150 79 -WFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE 157 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 56999999999999988877655444332 3456789999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 198 ~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
+|.++..+++++.++|+|+|+++++++++.+.+..|+.|+++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+|
T Consensus 158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa-~~~~~~~lelGG~~~~i 236 (451)
T cd07150 158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RHLKKITLELGGKNPLI 236 (451)
T ss_pred CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeE
Confidence 99999999999999999999999999977778999999999999999999999999999987 78999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 357 (502)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 316 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ 316 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
+++++.+|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 99999999999999864 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 438 NVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++++++++++++|.|+||++.... +.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 394 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 394 QRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred HHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 999999999999999999987644 67899999999999999999999999999985
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-94 Score=750.86 Aligned_cols=446 Identities=36% Similarity=0.615 Sum_probs=422.4
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (502)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~ 118 (502)
++++||+||+++++++.++.+|++++++.|++|++ .|+.+|.++|.++|++++++|.++.++|++++++|+|||..++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 78 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 36789999999999999999999999999999999 8999999999999999999999999999999999999999976
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (502)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k 193 (502)
..|+..+++.+++++..+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 -~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~K 157 (453)
T cd07094 79 -RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLK 157 (453)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEE
Confidence 46999999999999988776655433322 234567889999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (502)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~ 273 (502)
||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.||++|.|.||||+++|+.|++.+ .++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk 234 (453)
T cd07094 158 PASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCC
Confidence 99999999999999999999999999999997777899999999999999999999999999986 478999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (502)
Q Consensus 274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 353 (502)
||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+||++++.++++
T Consensus 235 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 314 (453)
T cd07094 235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAER 314 (453)
T ss_pred CceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
+.+++++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++|||
T Consensus 315 ~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 391 (453)
T cd07094 315 VERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIF 391 (453)
T ss_pred HHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEE
Confidence 999999999999999999864 58899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
|+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 392 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 392 TRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 999999999999999999999998654 578999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-93 Score=756.16 Aligned_cols=466 Identities=33% Similarity=0.474 Sum_probs=432.9
Q ss_pred eeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
.||+|+|+. ++.+++++||+| |+++++++.++.+|++++++.|++|++ .|+.++.++|.++|++++++|+++.++
T Consensus 35 p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (518)
T cd07125 35 PIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANRGE 110 (518)
T ss_pred ceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 589999983 578999999999 999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCe-eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
|++++++|+|||+.++ ..|+..+++.+++++..+++..+. ..+...+...+.+++|+|||++|+|||||+...+++++
T Consensus 111 la~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~ 189 (518)
T cd07125 111 LIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIA 189 (518)
T ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHH
Confidence 9999999999999976 469999999999999887765433 22322345568899999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
+||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.+.+..|+.|+++|.|+||||+++|+.|++.++..
T Consensus 190 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~ 269 (518)
T cd07125 190 AALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAER 269 (518)
T ss_pred HHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999997666889999999999999999999999999987622
Q ss_pred --CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 262 --NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 262 --~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 270 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 349 (518)
T cd07125 270 DGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLS 349 (518)
T ss_pred cCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCC
Confidence 278999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--CHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEA 417 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~ea 417 (502)
+++||++++.+++++.++++++.. ++++++||......|+|+.|||+.++ +|++++||+||||++|++|+ |+|||
T Consensus 350 ~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deA 426 (518)
T cd07125 350 TDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEA 426 (518)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHH
Confidence 999999999999999999999987 46899998764336899999999887 89999999999999999999 99999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCCC-cchHHHHHhhhhccEEEE
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g~-~~g~~~~~~~~~~k~v~~ 494 (502)
|+++|+++|||++||||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+|+ ++|++++++|++.|++++
T Consensus 427 i~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~ 506 (518)
T cd07125 427 IEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSL 506 (518)
T ss_pred HHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999997653 3678999999999995 788999999999999988
Q ss_pred ecC
Q 010735 495 PIF 497 (502)
Q Consensus 495 ~~~ 497 (502)
++.
T Consensus 507 ~~~ 509 (518)
T cd07125 507 NTT 509 (518)
T ss_pred Ecc
Confidence 763
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-94 Score=771.04 Aligned_cols=462 Identities=25% Similarity=0.322 Sum_probs=419.5
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
++||||+|+.+ ++.+++++||+||+++++++.++ .|+++|+++|++| |+ .|+++|..+|.++|++++++|+++.+
T Consensus 2 ~~~i~g~~~~~-~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 77 (663)
T TIGR02278 2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE 77 (663)
T ss_pred ceeECCEEEcC-CCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999976 35789999999999999999999 6999999999996 99 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhc--------Ceeeecc-c-ccccceeecCC-eEEEEEcCCC
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMS-R-ALQGYTLREPI-GVVGHIIPWN 170 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~~P~-Gvv~~i~p~n 170 (502)
+|++ +++|+|||+.++ ..|+..+++.+++++.++++.. +...+.. . ....++.++|+ |||++|+|||
T Consensus 78 ela~-~~~e~GK~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 78 ALYA-LAATTGATRRDN-WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred HHHH-HHHHcCCCHHHH-HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence 9999 599999999975 5699999999999998876522 3322221 1 12467899998 9999999999
Q ss_pred hhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcH
Q 010735 171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249 (502)
Q Consensus 171 ~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~ 249 (502)
||+..+++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+++++. +..+..++++|.|.||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 9999999999842 23333347789999999999
Q ss_pred HHHHHHHHH-hcCCCCceEEecCCCCceEEccCCC-----HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHH
Q 010735 250 VGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323 (502)
Q Consensus 250 ~g~~i~~~a-a~~~~~~~~~e~gG~~~~iV~~dad-----l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l 323 (502)
+|+.|++.+ +...++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l 312 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL 312 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence 999999874 2367899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCC-ccccccee
Q 010735 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM-LIAKNEIF 402 (502)
Q Consensus 324 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~-~~~~~E~f 402 (502)
+++++++++|+|.++++++||++++.++++++++|++|+++|+++++||.... +|+|++|||+.+++++| ++++||+|
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL-DGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CCeeEccEEEeeCCcchhhHHhcccc
Confidence 99999999999999999999999999999999999999999999999997643 58999999999998876 79999999
Q ss_pred eceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ceeEEEE-cCc-------C-CCCCCCCcCCCCC
Q 010735 403 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWI-NCY-------F-AFDSDCPYGGYKM 471 (502)
Q Consensus 403 gPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~i-N~~-------~-~~~~~~pfgG~~~ 471 (502)
|||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++ ++|.|+| |.. . ...+.+||||+|.
T Consensus 392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~ 471 (663)
T TIGR02278 392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR 471 (663)
T ss_pred CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999 8999999 641 1 1236789999999
Q ss_pred CCCCCc-chHHHHHhhhhccEEEE
Q 010735 472 SGFGRD-CGLESLHNYLQVKSVVT 494 (502)
Q Consensus 472 SG~g~~-~g~~~~~~~~~~k~v~~ 494 (502)
||+|++ +|.+++++|++.|+|..
T Consensus 472 SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 472 AGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CcCCCccchHHHHHHhceeEEEEc
Confidence 999999 46899999999999854
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-94 Score=749.40 Aligned_cols=447 Identities=36% Similarity=0.592 Sum_probs=418.0
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (502)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ 121 (502)
.||+||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ 77 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHA-FE 77 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HH
Confidence 48999999999999999999999999999999 8999999999999999999999999999999999999999975 57
Q ss_pred cHHHHHHHHHHHHHhhhhhcCee-eec--ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCc
Q 010735 122 DIPGAANTLRYYAGAADKIHGEV-LKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198 (502)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~ 198 (502)
|+..+++.+++++..+.+..... .+. ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~ 157 (454)
T cd07101 78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 99999999999998776544322 111 112356889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEE
Q 010735 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (502)
Q Consensus 199 ~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV 278 (502)
|+++..+.+++.++|+|+|+++++++++.+.++.|+.| +|.|.||||+.+|+.|++.++ ..++|+++|+|||||+||
T Consensus 158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV 234 (454)
T cd07101 158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNPMIV 234 (454)
T ss_pred hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCceEEE
Confidence 99999999999999999999999999877888999987 578999999999999999987 788999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHH
Q 010735 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358 (502)
Q Consensus 279 ~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 358 (502)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++++++
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 359 EHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
++++.+|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (454)
T cd07101 315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG 394 (454)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999997533 2579999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCC---CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 438 NVANTVSRSIRAGIIWINCYFA---FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~---~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++|+++|++.|++++
T Consensus 395 ~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 395 ARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 9999999999999999999754 34678999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-93 Score=750.02 Aligned_cols=465 Identities=35% Similarity=0.509 Sum_probs=436.8
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHHHHHHhH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF-SGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~-~~~~R~~~L~~~a~~l~~~~ 100 (502)
+++||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++|++ .|+.+ +.++|.++|++++++|.+++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~ 78 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK 78 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 3579999999864 68899999999999999999999999999999999999 89988 99999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
++|++++++|+|||..++ ..|+..+++.++++++..+++.+...+.. .+...+.+++|+|||++|+|||||+..
T Consensus 79 ~el~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 157 (473)
T cd07082 79 EEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL 157 (473)
T ss_pred HHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence 999999999999999976 46999999999999988776654433211 244567899999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
.++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.++++.|+.|+++|.|.||||+++|+.|.
T Consensus 158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~ 314 (473)
T cd07082 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314 (473)
T ss_pred HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8864 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415 (502)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 415 (502)
.++++++||++++.++++++++++++..+|+++++||... .|+|+.|||+.++++++++++||+||||++|++|+|++
T Consensus 315 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 392 (473)
T cd07082 315 WDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIE 392 (473)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHH
Confidence 9999999999999999999999999999999999999764 48999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus 393 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 393 EAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 9999999999999999999999999999999999999999977544 568999999999999999999999999999875
Q ss_pred e
Q 010735 495 P 495 (502)
Q Consensus 495 ~ 495 (502)
+
T Consensus 473 ~ 473 (473)
T cd07082 473 N 473 (473)
T ss_pred C
Confidence 3
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-93 Score=751.58 Aligned_cols=466 Identities=24% Similarity=0.348 Sum_probs=417.7
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-DHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~-~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
...++||||+|+.+ ++.+++++||+||+++++++. +.+|+++|++.|++|+ + .|+++|..+|.++|++++++|++
T Consensus 3 ~~~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~ 78 (521)
T PRK11903 3 ELLANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQA 78 (521)
T ss_pred chhhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHH
Confidence 34468999999975 356899999999999999997 8899999999999995 8 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc---------cccccceeecC-CeEEEEEcC
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---------RALQGYTLREP-IGVVGHIIP 168 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P-~Gvv~~i~p 168 (502)
++++|++++++|+|||+.++ ..|+..+++.+++++.+++.+.+...... .....++.++| +|||++|+|
T Consensus 79 ~~~ela~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~p 157 (521)
T PRK11903 79 NRDAYYDIATANSGTTRNDS-AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINA 157 (521)
T ss_pred HHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECC
Confidence 99999999999999999975 56999999999999998766543211100 11234677899 699999999
Q ss_pred CChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCC
Q 010735 169 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247 (502)
Q Consensus 169 ~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 247 (502)
||||+..+++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++++++|++.++...| +++|.|.||||
T Consensus 158 wN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS 234 (521)
T PRK11903 158 FNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGS 234 (521)
T ss_pred cchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECC
Confidence 999999999999999999999999999999999999999999999 99999999998655554443 78999999999
Q ss_pred cHHHHHHHHHH-hcCCCCceEEecCCCCceEEccCCC-----HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHH
Q 010735 248 TDVGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (502)
Q Consensus 248 ~~~g~~i~~~a-a~~~~~~~~~e~gG~~~~iV~~dad-----l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~ 321 (502)
+++|+.|++.+ +...++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 235 ~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~ 314 (521)
T PRK11903 235 AETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAE 314 (521)
T ss_pred HHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHH
Confidence 99999999864 2367899999999999999999999 59999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------CCCCceEecEEEeeCCC--C
Q 010735 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI------GKKGYYIEPTIFTNVTE--D 393 (502)
Q Consensus 322 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptvl~~~~~--~ 393 (502)
+|+++++++++|+|.++++++|||+++.+++++.++|+. ..+|+++++||... ..+|+|++|||+.++++ +
T Consensus 315 ~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~ 393 (521)
T PRK11903 315 ALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAA 393 (521)
T ss_pred HHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCcc
Confidence 999999999999999999999999999999999999986 45799999999652 12589999999986554 4
Q ss_pred CcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ceeEEEEcCcCC---------CCC
Q 010735 394 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFA---------FDS 462 (502)
Q Consensus 394 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~---------~~~ 462 (502)
+++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++ ++|+|+||+... ..+
T Consensus 394 ~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~ 473 (521)
T PRK11903 394 TAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMP 473 (521)
T ss_pred chHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999 899999997532 346
Q ss_pred CCCcCCCCCCCCCCcc-hHHHHHhhhhccEEEE
Q 010735 463 DCPYGGYKMSGFGRDC-GLESLHNYLQVKSVVT 494 (502)
Q Consensus 463 ~~pfgG~~~SG~g~~~-g~~~~~~~~~~k~v~~ 494 (502)
.+||||+|.||+|+++ |.+++++|++.|++..
T Consensus 474 ~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 474 QSLHGGPGRAGGGEELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence 7899999999999985 4899999999888754
|
|
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-93 Score=747.58 Aligned_cols=452 Identities=48% Similarity=0.815 Sum_probs=425.4
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|+++++++|++|++++.|+.+|.++|.++|++++++|.+++++|++++++|+|||..++ .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~ 79 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRET-R 79 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH-H
Confidence 479999999999999999999999999999996214999999999999999999999999999999999999999975 5
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~ 199 (502)
.|+..+++.+++++.+.+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 80 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p 159 (457)
T cd07114 80 AQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence 6999999999999887766544433322 344568899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~ 279 (502)
.++..++++|.++|+|+++|+++++++.+.+..|+.|++++.|.||||+.+|+.|++.++ .+++|+++|+|||||+||+
T Consensus 160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~ 238 (457)
T cd07114 160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-ENLAPVTLELGGKSPNIVF 238 (457)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEecCCCCeeEEC
Confidence 999999999999999999999999977778899999999999999999999999999987 7889999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (502)
Q Consensus 280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 359 (502)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus 239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (457)
T cd07114 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA 318 (457)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735 360 HGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435 (502)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 435 (502)
+++++|+++++||.... ..|.|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~ 398 (457)
T cd07114 319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTR 398 (457)
T ss_pred HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECC
Confidence 99999999999997643 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus 399 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 399 DLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 99999999999999999999987777889999999999999999999999999999853
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-93 Score=746.50 Aligned_cols=448 Identities=42% Similarity=0.703 Sum_probs=423.0
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|++++++|.++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 78 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD 78 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence 479999999999999999999999999999999 899999999999999999999999999999999999999986656
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~ 199 (502)
.|+..+++.+++++...+.+.+...+. ..+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 158 (450)
T cd07092 79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 699999999999998776554432211 1233567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~ 279 (502)
.++..+.++|.+ |+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+||+
T Consensus 159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~-~~~~~~~lelgG~~p~iV~ 236 (450)
T cd07092 159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIVF 236 (450)
T ss_pred HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeeEEC
Confidence 999999999999 99999999999877678899999999999999999999999999987 7899999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (502)
Q Consensus 280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 359 (502)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus 237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~ 316 (450)
T cd07092 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE 316 (450)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010735 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439 (502)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 439 (502)
++. +|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus 317 ~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~ 395 (450)
T cd07092 317 RAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGR 395 (450)
T ss_pred HHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 998 9999999997654578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|++.|+++
T Consensus 396 ~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 396 AMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 999999999999999998877788999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-93 Score=746.10 Aligned_cols=447 Identities=34% Similarity=0.526 Sum_probs=423.0
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (502)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ 121 (502)
+||+||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ 77 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA-GG 77 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HH
Confidence 58999999999999999999999999999999 8999999999999999999999999999999999999999975 57
Q ss_pred cHHHHHHHHHHHHHhhhhhcCee-eecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735 122 DIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (502)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~ 200 (502)
|+..+++.+++++..+++..+.. .+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 157 (452)
T cd07102 78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 99999999999988776654332 22233445678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~ 280 (502)
++..+.++|.++|+|+|++|++++++ +.+..|+.||++|.|.||||+++|+.|++.++ ...+|+.+|+|||||+||++
T Consensus 158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~-~~~~~v~lelgG~~~~iV~~ 235 (452)
T cd07102 158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAA-GRFIKVGLELGGKDPAYVRP 235 (452)
T ss_pred HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCceEEcC
Confidence 99999999999999999999999966 78999999999999999999999999999877 78899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (502)
Q Consensus 281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (502)
|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~ 315 (452)
T cd07102 236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD 315 (452)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCccc---CCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 361 GKREGATLLTGGKPI---GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 361 a~~~Ga~v~~gg~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
++.+|+++++||... ...|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 395 (452)
T cd07102 316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDI 395 (452)
T ss_pred HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999753 23689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 396 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 396 ARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 99999999999999999998777778999999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-93 Score=745.87 Aligned_cols=446 Identities=36% Similarity=0.601 Sum_probs=418.7
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (502)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~ 118 (502)
++++||+||+++++++.++.+|+++++++|++|++ .|++++.++|.++|++++++|.++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 36899999999999999999999999999999999 8999999999999999999999999999999999999999975
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (502)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k 193 (502)
..|+..+++.+++++..+.+..++..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 -~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 79 -RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 46999999999999887765444322211 234567889999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (502)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~ 273 (502)
||+.+|.++..++++|.++|+|+|++++++++ .+.+..|+.|+++|.|.||||+.+|+.|++.++ .+|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~---~~~v~lelgG~ 233 (452)
T cd07147 158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAG---KKKVVLELGGN 233 (452)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC---cCceEeecCCC
Confidence 99999999999999999999999999999984 467899999999999999999999999999865 47999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (502)
Q Consensus 274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 353 (502)
||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 313 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER 313 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
+.+++++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++|||
T Consensus 314 ~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~ 390 (452)
T cd07147 314 VEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVF 390 (452)
T ss_pred HHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 999999999999999999975 58999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
|+|.++++++++++++|.|+||+.+.. .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 391 t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 391 TRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 999999999999999999999997654 4678999999999999999999999999999863
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-93 Score=744.66 Aligned_cols=451 Identities=29% Similarity=0.443 Sum_probs=420.0
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCC-ceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTG-EAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
+++||||+|+. ++.+++++||+|+ +++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.
T Consensus 38 ~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 113 (500)
T TIGR01238 38 AAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLELHM 113 (500)
T ss_pred cCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHH
Confidence 47899999987 5778999999996 89999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
++|++++++|+|||..++ ..|+..+++.+++++...+...+ ...++|+|||++|+|||||+...++++
T Consensus 114 ~ela~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~~~~i 181 (500)
T TIGR01238 114 PELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIFTGQI 181 (500)
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECCCchHHHHHHHHH
Confidence 999999999999999975 56999999999999987754321 136899999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.|+++|.|.||||+.+|+.|++.++
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa- 260 (500)
T TIGR01238 182 SAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA- 260 (500)
T ss_pred HHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999876678999999999999999999999999999887
Q ss_pred CCC---CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 261 SNL---KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 261 ~~~---~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
.+. +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 261 ~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~ 340 (500)
T TIGR01238 261 QREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHL 340 (500)
T ss_pred hcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCC
Confidence 444 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc---ccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK-- 412 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~---~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~-- 412 (502)
+++++||++++.+++++.++++++++.|++++.++. ....+|+|++|||+.+ ++|.++++|+||||++|++|+
T Consensus 341 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~ 418 (500)
T TIGR01238 341 LTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKAR 418 (500)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCC
Confidence 999999999999999999999999999999875432 1223699999999973 688899999999999999998
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~ 489 (502)
++||||+++|+++|||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+| +++|.+++++|++.
T Consensus 419 ~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~ 498 (500)
T TIGR01238 419 ELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQV 498 (500)
T ss_pred CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhh
Confidence 799999999999999999999999999999999999999999997653 256799999999999 89999999999998
Q ss_pred cE
Q 010735 490 KS 491 (502)
Q Consensus 490 k~ 491 (502)
|.
T Consensus 499 k~ 500 (500)
T TIGR01238 499 QY 500 (500)
T ss_pred cC
Confidence 73
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-93 Score=744.56 Aligned_cols=448 Identities=42% Similarity=0.723 Sum_probs=421.6
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH-HHHh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH-SWAK 119 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~~~ 119 (502)
++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||. .++
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a- 77 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQA- 77 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHH-
Confidence 579999999999999999999999999999999 8999999999999999999999999999999999999997 554
Q ss_pred hccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (502)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~ 199 (502)
..|+..+++.+++++.+...+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 78 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 157 (457)
T cd07108 78 RPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP 157 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 57999999999999987766655544433344567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~ 279 (502)
.++..+.+++.++ +|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa-~~l~~~~lelgG~~~~iV~ 235 (457)
T cd07108 158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLIPVSLELGGKSPMIVF 235 (457)
T ss_pred HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHh-ccCCeEEEECCCCCeeEEC
Confidence 9999999999987 9999999999877778899999999999999999999999999987 7889999999999999999
Q ss_pred cCCCHHHHHHHHHHH-HhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHH
Q 010735 280 DDVDVNTAADMALLG-ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358 (502)
Q Consensus 280 ~dadl~~aa~~iv~~-~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i 358 (502)
+|||++.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i 315 (457)
T cd07108 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYI 315 (457)
T ss_pred CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999 5999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-cCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 359 EHGKR-EGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 359 ~~a~~-~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
+++++ +|+++++||..+. ..|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++|||
T Consensus 316 ~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vf 395 (457)
T cd07108 316 DLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVW 395 (457)
T ss_pred HHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEE
Confidence 99998 9999999997642 358999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHH-HHhhhhccEEE
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES-LHNYLQVKSVV 493 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~-~~~~~~~k~v~ 493 (502)
|+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.++ +++|++.|+++
T Consensus 396 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 396 TRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred cCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 9999999999999999999999987777889999999999999999966 79999999885
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-93 Score=768.82 Aligned_cols=467 Identities=25% Similarity=0.340 Sum_probs=420.2
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLI 96 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l 96 (502)
|++..++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+ .|+++|..+|.++|++++++|
T Consensus 1 ~~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l 76 (675)
T PRK11563 1 MMQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYL 76 (675)
T ss_pred CCccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHH
Confidence 4566689999999986 56789999999999999999987 6999999999998 78 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhc--------Ceeeecc-cc-cccceeecCC-eEEEE
Q 010735 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMS-RA-LQGYTLREPI-GVVGH 165 (502)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~-~~-~~~~~~~~P~-Gvv~~ 165 (502)
+++.++|++ +++|+|||+.++ ..|+..+++.+++++.++++.. ++..+.. .+ ...+..++|+ |||++
T Consensus 77 ~~~~~ela~-l~~e~GK~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~ 154 (675)
T PRK11563 77 LERKEELYA-LSAQTGATRRDS-WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVH 154 (675)
T ss_pred HHhHHHHHH-HHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEE
Confidence 999999998 589999999976 4699999999999998875432 2222211 11 1246888997 99999
Q ss_pred EcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhCCCcCEEEE
Q 010735 166 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244 (502)
Q Consensus 166 i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~f 244 (502)
|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+++|+. +..+..+++++.|.|
T Consensus 155 I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~---~~~~~~~~~i~~v~F 231 (675)
T PRK11563 155 INAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSA---GDLLDHLDGQDVVTF 231 (675)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCH---HHHhhcCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999 9999999999853 233444568999999
Q ss_pred cCCcHHHHHHHHHH-hcCCCCceEEecCCCCceEEccCCC-----HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHH
Q 010735 245 TGSTDVGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318 (502)
Q Consensus 245 tGs~~~g~~i~~~a-a~~~~~~~~~e~gG~~~~iV~~dad-----l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~ 318 (502)
|||+++|+.|++.+ +..+++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|++++|||||+++||+
T Consensus 232 TGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~ 311 (675)
T PRK11563 232 TGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDA 311 (675)
T ss_pred ECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHH
Confidence 99999999999853 2368999999999999999999995 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------CCCCceEecEEEeeCC
Q 010735 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVT 391 (502)
Q Consensus 319 f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptvl~~~~ 391 (502)
|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++ +++++||... ..+|+|++|||+.+++
T Consensus 312 f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~ 390 (675)
T PRK11563 312 VIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDD 390 (675)
T ss_pred HHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccC
Confidence 9999999999999999999999999999999999999999999998 9999999532 1358999999999999
Q ss_pred C--CCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC--------
Q 010735 392 E--DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA-------- 459 (502)
Q Consensus 392 ~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~-------- 459 (502)
+ ++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++ +|.||||+.+.
T Consensus 391 ~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~ 470 (675)
T PRK11563 391 PLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHG 470 (675)
T ss_pred chhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCC
Confidence 8 57999999999999999999999999999999999999999999999999999997 99999997531
Q ss_pred -CCCCCCcCCCCCCCCCCc-chHHHHHhhhhccEEEE
Q 010735 460 -FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 494 (502)
Q Consensus 460 -~~~~~pfgG~~~SG~g~~-~g~~~~~~~~~~k~v~~ 494 (502)
..+.+||||+|.||+|++ +|.+++++|++.|+|..
T Consensus 471 ~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 471 SPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 126789999999999999 46999999999998753
|
|
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-92 Score=740.75 Aligned_cols=446 Identities=36% Similarity=0.576 Sum_probs=419.9
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (502)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ 121 (502)
+||+||+++++++.++.+|+++++++|++|++ .|+.++.++|.++|++++++|++++++|++++++|+|||..+ ...
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-~~~ 77 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRAD-AGL 77 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHH
Confidence 58999999999999999999999999999999 899999999999999999999999999999999999999995 567
Q ss_pred cHHHHHHHHHHHHHhhhhhcCee-eec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCC
Q 010735 122 DIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (502)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~ 197 (502)
|+..+++.+++++..+.+..+.. .+. ..+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus 78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~ 157 (453)
T cd07099 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999998876554321 221 13456788999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 198 ~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
+|.++..++++|.++|+|+|+++++++++ +.+..|+.| .+|.|+||||+++|+.|.+.++ .+++|+++|+|||||+|
T Consensus 158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~i 234 (453)
T cd07099 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAA-ERLIPVVLELGGKDPMI 234 (453)
T ss_pred chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEE
Confidence 99999999999999999999999999965 678889887 5999999999999999999987 77999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 357 (502)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~ 314 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH 314 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
+++++++|+++++||.....+|.|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||++||||+|.
T Consensus 315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (453)
T cd07099 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDL 394 (453)
T ss_pred HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCH
Confidence 99999999999999976533689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 438 NVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus 395 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 395 ARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 9999999999999999999854 3578999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=738.09 Aligned_cols=439 Identities=37% Similarity=0.599 Sum_probs=414.3
Q ss_pred CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHH
Q 010735 47 GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGA 126 (502)
Q Consensus 47 g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~ 126 (502)
|+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~ 77 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKA-GFEVGAA 77 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHH
Confidence 688999999999999999999999999 8999999999999999999999999999999999999999865 5699999
Q ss_pred HHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHH-HHH
Q 010735 127 ANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYF 205 (502)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~-~~l 205 (502)
++.+++++.+.+...+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++ ..+
T Consensus 78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l 157 (443)
T cd07152 78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI 157 (443)
T ss_pred HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence 9999999987655444433333445568899999999999999999999999999999999999999999999996 789
Q ss_pred HHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHH
Q 010735 206 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285 (502)
Q Consensus 206 ~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~ 285 (502)
.++|.++|+|+|++|++++ +.+.+..|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++
T Consensus 158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHH
Confidence 9999999999999999998 5568899999999999999999999999999887 7899999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC
Q 010735 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365 (502)
Q Consensus 286 ~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G 365 (502)
.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++.+||++++.+++++.+++++++.+|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHh
Q 010735 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 445 (502)
Q Consensus 366 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~ 445 (502)
+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++
T Consensus 316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 999999974 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceeEEEEcCcCCCC-CCCCcCCCCCCCCC-CcchHHHHHhhhhccEEE
Q 010735 446 SIRAGIIWINCYFAFD-SDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 446 ~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~ 493 (502)
++++|.|+||++.... +.+||||+|.||+| +++|++|+++|++.|+++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 9999999999976644 67999999999999 888999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-92 Score=738.91 Aligned_cols=449 Identities=44% Similarity=0.743 Sum_probs=426.5
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++++++.|++|++ .|+.+|.++|.++|+++++.|.++.++|++++++|+|||..++ .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~ 77 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEA-R 77 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-H
Confidence 479999999999999999999999999999999 8999999999999999999999999999999999999999975 5
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~ 199 (502)
.|+..+++.+++++..+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 157 (451)
T cd07103 78 GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP 157 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 6999999999999887766555443322 355678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~ 279 (502)
.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++ ..++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEEC
Confidence 999999999999999999999999977678899999999999999999999999999987 7899999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (502)
Q Consensus 280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 359 (502)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+||++++.+++++.++++
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~ 316 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE 316 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010735 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439 (502)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 439 (502)
+++.+|+++++||.....+|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 396 (451)
T cd07103 317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR 396 (451)
T ss_pred HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 99999999999997654468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 397 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 397 AWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 999999999999999998877788999999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-92 Score=739.21 Aligned_cols=450 Identities=48% Similarity=0.826 Sum_probs=426.3
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120 (502)
Q Consensus 41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 120 (502)
++||+||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|++++++|.+++++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ 78 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART 78 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 369999999999999999999999999999999 899999999999999999999999999999999999999987766
Q ss_pred ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200 (502)
Q Consensus 121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~ 200 (502)
.|+..+++.++++++......+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~ 158 (455)
T cd07093 79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL 158 (455)
T ss_pred HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence 79999999999998877654443333333556678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~ 280 (502)
++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++
T Consensus 159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~ 237 (455)
T cd07093 159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVSLELGGKNPNIVFA 237 (455)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHh-hcccceEeecCCCCceEECC
Confidence 99999999999999999999999977778899999999999999999999999999987 78999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (502)
Q Consensus 281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (502)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (455)
T cd07093 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVEL 317 (455)
T ss_pred CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735 361 GKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436 (502)
Q Consensus 361 a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d 436 (502)
++.+|+++++||.... ..|.|+.|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 318 a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d 397 (455)
T cd07093 318 ARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRD 397 (455)
T ss_pred HHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999999999997643 258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 437 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 398 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 398 LGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 999999999999999999998877788999999999999999999999999999885
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-92 Score=733.74 Aligned_cols=442 Identities=35% Similarity=0.565 Sum_probs=413.8
Q ss_pred EeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh
Q 010735 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119 (502)
Q Consensus 40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~ 119 (502)
+++||+||+++++++.++.+|+++++++|+++ |+.++.++|.++|++++++|++++++|++++++|+|||+.++
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~-----~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a- 75 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY-----RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDT- 75 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-
Confidence 57899999999999999999999999998753 778999999999999999999999999999999999999976
Q ss_pred hccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEec
Q 010735 120 MGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (502)
Q Consensus 120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kp 194 (502)
..|+..+++.+++++..+....++..+.. .+...+..++|+|||++|+|||||++.+++++++||++||+||+||
T Consensus 76 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 155 (451)
T cd07146 76 RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 56999999999999887765544332221 2334678899999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC
Q 010735 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (502)
Q Consensus 195 s~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~ 274 (502)
|+.+|+++..+.++|.++|+|+|+++++++++.++++.|+.|+++|.|.||||+.+|+.|.+.++ .+|+++|+||||
T Consensus 156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~ 232 (451)
T cd07146 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND 232 (451)
T ss_pred CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence 99999999999999999999999999999977778999999999999999999999999998764 689999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 010735 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (502)
Q Consensus 275 ~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~ 354 (502)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+|||+++.+++++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEec
Q 010735 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434 (502)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t 434 (502)
++++++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 389 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999964 589999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCC-CCcchHHHHHhhhhccEEE
Q 010735 435 KDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGF-GRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 435 ~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~-g~~~g~~~~~~~~~~k~v~ 493 (502)
+|.++++++++++++|+|+||+.+.. .+.+||||+|.||+ |+++|++|+++|++.|+++
T Consensus 390 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 390 NDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99999999999999999999987554 47799999999995 8999999999999999885
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-92 Score=737.60 Aligned_cols=450 Identities=35% Similarity=0.563 Sum_probs=418.0
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735 42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121 (502)
Q Consensus 42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ 121 (502)
+||+||+++++++.++.+|++++++.|++|++ .|+++|.++|.++|++++++|.+++++|++++++|+|||+.++...
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 78 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG 78 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 59999999999999999999999999999999 8999999999999999999999999999999999999999987667
Q ss_pred cHHHHHHHHHHHHHhhhhhcC-eeeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCC
Q 010735 122 DIPGAANTLRYYAGAADKIHG-EVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (502)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~ 197 (502)
|+..+++.+++++..++.... ...+.. .....++.++|+|||++|+|||||+..++.++++||++||+||+|||+.
T Consensus 79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 158 (465)
T cd07098 79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ 158 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999876654322 121211 1234578899999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHH----HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735 198 TPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (502)
Q Consensus 198 ~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~ 273 (502)
+|+++..+++++ .++|+|+|++|++++++ +.++.|+.|++|+.|.||||+.+|+.|.+.++ ..++|+++|+|||
T Consensus 159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~-~~~~~~~lelgG~ 236 (465)
T cd07098 159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAA-ESLTPVVLELGGK 236 (465)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCC
Confidence 999998766554 68999999999999955 78999999999999999999999999999987 7899999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (502)
Q Consensus 274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 353 (502)
||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++++||++++.++++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCce
Q 010735 354 ILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 429 (502)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 429 (502)
+.+++++++.+|+++++||.... ..|+|+.|||+.+++++|+++++|+||||++|++|+|+|||++++|+++|||+
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLs 396 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLG 396 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999986532 25899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 430 AGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 430 ~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++|+++|+++++
T Consensus 397 a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 397 ASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 999999999999999999999999998753 347899999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-92 Score=729.25 Aligned_cols=427 Identities=38% Similarity=0.590 Sum_probs=403.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010735 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140 (502)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~ 140 (502)
++++++.|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+++.+++++..+++.
T Consensus 1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~ 77 (429)
T cd07100 1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAEVEKCAWICRYYAENAEAF 77 (429)
T ss_pred CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 4789999999999 8999999999999999999999999999999999999999976 569999999999999887765
Q ss_pred cC-eeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceE
Q 010735 141 HG-EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL 219 (502)
Q Consensus 141 ~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~ 219 (502)
.. ...+. .+...+++++|+|||++|+|||||++.+++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++
T Consensus 78 ~~~~~~~~-~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv 156 (429)
T cd07100 78 LADEPIET-DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF 156 (429)
T ss_pred cCCeeccC-CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence 43 22332 23456789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccC
Q 010735 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299 (502)
Q Consensus 220 ~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~ 299 (502)
+++++++ +.+..|+.|++++.|.||||+++|+.|++.++ ..+||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 9999955 46789999999999999999999999999987 789999999999999999999999999999999999999
Q ss_pred CCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC
Q 010735 300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379 (502)
Q Consensus 300 Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g 379 (502)
||.|+++++||||+++||+|+++|+++++++++|+|+++++++||++++.+++++.+++++++++|+++++||......|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997654458
Q ss_pred ceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC
Q 010735 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA 459 (502)
Q Consensus 380 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 459 (502)
+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||++..
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 460 FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 460 ~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
..+.+||||+|.||+|+++|++++++|++.|+++
T Consensus 395 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 395 SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 7788999999999999999999999999999885
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-91 Score=730.26 Aligned_cols=446 Identities=40% Similarity=0.641 Sum_probs=419.4
Q ss_pred EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118 (502)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~ 118 (502)
++++||+||+++++++.++.++++++++.|++|++ .|+.++.++|.++|++++++|.++.++|++++++|+|||..++
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence 46789999999999999999999999999999999 8999999999999999999999999999999999999999976
Q ss_pred hhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193 (502)
Q Consensus 119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k 193 (502)
..|+..+++.+++++..++...+...+.. .+...+.+++|+|||++|+|||||+..+++++++||++||+||+|
T Consensus 79 -~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K 157 (453)
T cd07149 79 -RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157 (453)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 46999999999998887765544332221 123357889999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273 (502)
Q Consensus 194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~ 273 (502)
||+.+|.++..+.+++.++|+|+|+++++++++.+++..|+.|+++|.|.||||+.+|+.|++.++ .+|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk 234 (453)
T cd07149 158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCC
Confidence 999999999999999999999999999999976677899999999999999999999999999863 78999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (502)
Q Consensus 274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 353 (502)
||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 314 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER 314 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
+.+++++++.+|+++++||.. .|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++||
T Consensus 315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~ 391 (453)
T cd07149 315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF 391 (453)
T ss_pred HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 999999999999999999865 47899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
|+|.++++++++++++|.|+||+.... .+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 392 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 392 TNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 999999999999999999999997654 467899999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-89 Score=714.63 Aligned_cols=433 Identities=27% Similarity=0.386 Sum_probs=401.4
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (502)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 134 (502)
.++.+|+++++++|++||+ .|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++
T Consensus 2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~ 79 (484)
T PLN02203 2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL 79 (484)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999 89999999999999999999999999999999999999999765579999999999999
Q ss_pred HhhhhhcCe---eeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735 135 GAADKIHGE---VLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (502)
Q Consensus 135 ~~~~~~~~~---~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~ 210 (502)
+..++..+. ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~ 159 (484)
T PLN02203 80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP 159 (484)
T ss_pred HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 876655332 1111 123456899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc---CCCHHHH
Q 010735 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD---DVDVNTA 287 (502)
Q Consensus 211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~---dadl~~a 287 (502)
++ +|+|++|+++| +.+++..|+.|+ +|.|+||||+++|+.|++.++ ..++|+++|+|||||+||++ |||++.|
T Consensus 160 ~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa-~~l~~v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 160 KY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred Hh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence 86 99999999998 677899999995 999999999999999999987 78999999999999999997 6999999
Q ss_pred HHHHHHHHhc-cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 010735 288 ADMALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366 (502)
Q Consensus 288 a~~iv~~~~~-~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga 366 (502)
++.+++++|. |+||.|++++|+|||++++|+|+++|.++++++++|+|.++ +++||++++.+++++.+++++++.+ +
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~ 313 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A 313 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 9999999995 89999999999999999999999999999999999999885 6899999999999999999999887 7
Q ss_pred EEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhh
Q 010735 367 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 446 (502)
Q Consensus 367 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~ 446 (502)
++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++
T Consensus 314 ~~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~ 392 (484)
T PLN02203 314 SIVHGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSE 392 (484)
T ss_pred eEEeCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 899998753 3699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 447 IRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 447 l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
+++|.|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|+.+.
T Consensus 393 l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 393 TSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred CCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 9999999999754 3477999999999999999999999999999998764
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-90 Score=713.01 Aligned_cols=427 Identities=32% Similarity=0.460 Sum_probs=396.7
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhh
Q 010735 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139 (502)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~ 139 (502)
|++++++.|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+++.+++++....+
T Consensus 1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~ 77 (431)
T cd07095 1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QTEVAAMAGKIDISIKAYHE 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 8999999999999999999999999999999999999999976 56999999999998887765
Q ss_pred hcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceE
Q 010735 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL 219 (502)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~ 219 (502)
..+.......+...++.++|+|||++|+|||||++.+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~ 157 (431)
T cd07095 78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL 157 (431)
T ss_pred hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence 54433222234567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccC
Q 010735 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299 (502)
Q Consensus 220 ~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~ 299 (502)
+++++ +.+.++.|++|+++|.|.||||+++|+.|++.++....+++.+|+|||||+||++|||++.|++.+++++|.|+
T Consensus 158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 236 (431)
T cd07095 158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236 (431)
T ss_pred eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence 99998 45678999999999999999999999999998764557999999999999999999999999999999999999
Q ss_pred CCCcCCCcEEEEecc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735 300 GEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (502)
Q Consensus 300 Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (502)
||.|+++++||||++ ++|+|+++|+++++++++|+|.++++.+||+++..+++++.+++++++.+|+++++||...+.+
T Consensus 237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~ 316 (431)
T cd07095 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG 316 (431)
T ss_pred CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999765557
Q ss_pred CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcC
Q 010735 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 458 (502)
Q Consensus 379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 458 (502)
|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+..
T Consensus 317 g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~ 395 (431)
T cd07095 317 TAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPT 395 (431)
T ss_pred CeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999 6899999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred C-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 459 A-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 459 ~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
. ..+.+||||+|.||+|+++|.+|+++|+ .|++
T Consensus 396 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~-~~~~ 429 (431)
T cd07095 396 TGASSTAPFGGVGLSGNHRPSAYYAADYCA-YPVA 429 (431)
T ss_pred CCCCCCCCCCCcccccCCCCChHHHHHHHh-hhhc
Confidence 5 3467899999999999999999999554 4544
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=703.78 Aligned_cols=406 Identities=35% Similarity=0.595 Sum_probs=383.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEc
Q 010735 89 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 167 (502)
Q Consensus 89 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 167 (502)
|++++++|++++++|++++++|+|||+.++ ..|+..+++.+++++.+++...+...+.. .+...+++++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999976 46999999999999999877655433221 2345788999999999999
Q ss_pred CCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCC
Q 010735 168 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247 (502)
Q Consensus 168 p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 247 (502)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.+..|+.|+++|+|.||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred cHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHH
Q 010735 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327 (502)
Q Consensus 248 ~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~ 327 (502)
+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 160 ~~~g~~v~~~aa-~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAA-KNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999887 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCC-CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceE
Q 010735 328 KAWVVGDPFDP-AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 406 (502)
Q Consensus 328 ~~~~~g~~~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 406 (502)
+++++|+|.++ ++++|||+++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 89999999999999999999999999999999997755468999999999999999999999999999
Q ss_pred EEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhh
Q 010735 407 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 486 (502)
Q Consensus 407 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~ 486 (502)
+|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+..||||+|.||+|+++|.+|+++|
T Consensus 319 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f 398 (409)
T PRK10090 319 PVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 398 (409)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877666789999999999999999999999
Q ss_pred hhccEEEEec
Q 010735 487 LQVKSVVTPI 496 (502)
Q Consensus 487 ~~~k~v~~~~ 496 (502)
++.|++++++
T Consensus 399 ~~~k~v~~~~ 408 (409)
T PRK10090 399 LQTQVVYLQS 408 (409)
T ss_pred cceEEEEEec
Confidence 9999998764
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-89 Score=759.26 Aligned_cols=462 Identities=32% Similarity=0.484 Sum_probs=429.4
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCc-eEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGE-AIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~-~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
+.+||| ++..++++||+|++ ++++++.++.+|+++|++.|++||+ .|+.+|.++|.++|++++++|+++++
T Consensus 554 ~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~~~ 625 (1038)
T PRK11904 554 GPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEANRA 625 (1038)
T ss_pred cceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 346777 35689999999988 9999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCe--eeecccccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE--VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
+|+.++++|+|||+.++ ..|+..++++++||+..+++..+. ..+...+..++..++|+|||++|+|||||+..++++
T Consensus 626 eL~~l~~~E~GK~~~~a-~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~ 704 (1038)
T PRK11904 626 ELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQ 704 (1038)
T ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHH
Confidence 99999999999999975 679999999999999988776543 233345667889999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|+.||+++.|.||||+.+++.|.+.++
T Consensus 705 i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A 784 (1038)
T PRK11904 705 VAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLA 784 (1038)
T ss_pred HHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988789999999999999999999999999999877
Q ss_pred cC--CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 260 TS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 260 ~~--~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
.. ..+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 785 ~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d 864 (1038)
T PRK11904 785 ARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRL 864 (1038)
T ss_pred hccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCccc
Confidence 33 2679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--C
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--T 413 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~ 413 (502)
+++++||++++.+++++.++|+++.+ |+++++||..++ .+|+|+.|||+. .+++.++++|+||||++|++|+ +
T Consensus 865 ~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~ 941 (1038)
T PRK11904 865 LSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASD 941 (1038)
T ss_pred ccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCC
Confidence 99999999999999999999999876 899999997653 259999999996 3577889999999999999998 6
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhcc
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVK 490 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k 490 (502)
++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+... ..+.+||||+|.||+| +.+|++++++|++.|
T Consensus 942 ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~k 1021 (1038)
T PRK11904 942 LDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEK 1021 (1038)
T ss_pred HHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceE
Confidence 9999999999999999999999999999999999999999999765 3356899999999999 688999999999999
Q ss_pred EEEEec
Q 010735 491 SVVTPI 496 (502)
Q Consensus 491 ~v~~~~ 496 (502)
+|+++.
T Consensus 1022 tv~~~~ 1027 (1038)
T PRK11904 1022 TVTVNT 1027 (1038)
T ss_pred EEEEcc
Confidence 998875
|
|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=709.27 Aligned_cols=427 Identities=29% Similarity=0.425 Sum_probs=397.0
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHH
Q 010735 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (502)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~ 135 (502)
++.+|+++++++|++|++ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++.
T Consensus 2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 578999999999999999 899999999999999999999999999999999999999997644699999999999998
Q ss_pred hhhhhcCee-eecc----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735 136 AADKIHGEV-LKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (502)
Q Consensus 136 ~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~ 210 (502)
.+++..... .... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~ 159 (436)
T cd07135 80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP 159 (436)
T ss_pred HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence 776543221 1110 13456889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHH
Q 010735 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (502)
Q Consensus 211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~ 290 (502)
+ |+|+|+++++++.+.+. ..|+.|+ +|.|.||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.
T Consensus 160 ~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 160 K-YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred H-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHH-hcCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 9 69999999999865554 5688999 999999999999999999877 789999999999999999999999999999
Q ss_pred HHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 010735 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (502)
Q Consensus 291 iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (502)
+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++.+||++++.+++++.++++++ |+++++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~ 311 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI 311 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence 999999999999999999999999999999999999999999999 8999999999999999999999887 889999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhccee
Q 010735 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 450 (502)
Q Consensus 371 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g 450 (502)
||.... +|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus 312 gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g 390 (436)
T cd07135 312 GGEMDE-ATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSG 390 (436)
T ss_pred CCCcCC-CCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcC
Confidence 997653 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 451 IIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 451 ~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
.|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|.
T Consensus 391 ~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 391 GVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred eEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 999998764 3578999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-89 Score=712.95 Aligned_cols=431 Identities=26% Similarity=0.400 Sum_probs=397.9
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (502)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 134 (502)
..+.+|++++++.|+++|+ .|+.++.++|.++|++++++|++|+++|++++++|+|||..++...|+..+++.+++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~ 80 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL 80 (493)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999 89999999999999999999999999999999999999999876679999999999988
Q ss_pred HhhhhhcCe-eeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735 135 GAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (502)
Q Consensus 135 ~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~ 210 (502)
+..++.... .... ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~ 160 (493)
T PTZ00381 81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT 160 (493)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence 766543221 1111 122357889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHH
Q 010735 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (502)
Q Consensus 211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~ 290 (502)
++ +|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.
T Consensus 161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa-~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHH-hcCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 96 99999999998 667888899887 999999999999999999987 789999999999999999999999999999
Q ss_pred HHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 010735 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (502)
Q Consensus 291 iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (502)
+++++|.|+||.|+++++||||++++|+|+++|++.+++++ |++.++++++||+++..+++++.++++ .+|+++++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~ 312 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence 99999999999999999999999999999999999999986 666678899999999999999999996 36899999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhccee
Q 010735 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 450 (502)
Q Consensus 371 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g 450 (502)
||..+ ..+.|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus 313 gG~~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG 391 (493)
T PTZ00381 313 GGEVD-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSG 391 (493)
T ss_pred CCCcC-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 99764 36889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 451 IIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 451 ~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
.|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|..+.
T Consensus 392 ~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 392 AVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred eEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 999998754 4578999999999999999999999999999998764
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-89 Score=707.24 Aligned_cols=441 Identities=22% Similarity=0.303 Sum_probs=399.0
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW--PRFSGAER----RGIMLKFADLIE 97 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w--~~~~~~~R----~~~L~~~a~~l~ 97 (502)
+||||+|+.+ +++++++||+||+++++++.++.+|+++++++|++||+ .| +.++..+| .++|+++++.|+
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~ 76 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR 76 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence 4799999874 57899999999999999999999999999999999999 77 56779999 899999999999
Q ss_pred Hh--HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee--ec-ccccccceeecCCeEEEEEcCCChh
Q 010735 98 EH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KM-SRALQGYTLREPIGVVGHIIPWNFP 172 (502)
Q Consensus 98 ~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (502)
++ .++|++++++|+|||+.++ ..|+..+++.+++++...++..+... +. ..+...+++++|+|||++|+|||||
T Consensus 77 ~~~~~~~la~~~~~e~GK~~~~a-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 77 KPEVEDFFARLIQRVAPKSDAQA-LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence 98 5999999999999999975 57999999999999988766544432 21 1244568999999999999999999
Q ss_pred HHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHH
Q 010735 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (502)
Q Consensus 173 ~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 252 (502)
+...++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+++|.+.+ +..++.|+++|+|+||||+++|+
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr 234 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE 234 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999996554 55688899999999999999999
Q ss_pred HHHHHHhcCCCCceEEecCCCCceEEccCC-CHHHHHHHHHHHHhccCCCCcCCCcEEEEeccc-HHHHHHHHHHHHhcc
Q 010735 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAW 330 (502)
Q Consensus 253 ~i~~~aa~~~~~~~~~e~gG~~~~iV~~da-dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i-~~~f~~~l~~~~~~~ 330 (502)
.|...++ +++.+|+||+||+||++|| |++.|++.+++++|.|+||.|++++|||||+++ +|+|+++|++.++++
T Consensus 235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~ 310 (489)
T cd07126 235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR 310 (489)
T ss_pred HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence 9988764 5799999999999999999 999999999999999999999999999999995 689999999999999
Q ss_pred ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCC----CC-ceEecEEEee------CCCCCcccc
Q 010735 331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGK----KG-YYIEPTIFTN------VTEDMLIAK 398 (502)
Q Consensus 331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~----~g-~~~~Ptvl~~------~~~~~~~~~ 398 (502)
++|+ +++||+++.. .+++.++++++++ +|+++++||..+.. .+ .|++|||+.. ++++|++++
T Consensus 311 ~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~ 384 (489)
T cd07126 311 KLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVT 384 (489)
T ss_pred ccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHh
Confidence 8874 5789999998 9999999999998 99999999976432 23 3899999942 567999999
Q ss_pred cceeeceEEEEEeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeE--EEEcCcCCCCCC----CCcCCCC
Q 010735 399 NEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI--IWINCYFAFDSD----CPYGGYK 470 (502)
Q Consensus 399 ~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~--v~iN~~~~~~~~----~pfgG~~ 470 (502)
||+||||++|++|+| ++|||+++|+++|||++||||+|.++++++++++++|+ |+||+.+...+. .||||+|
T Consensus 385 eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k 464 (489)
T cd07126 385 TEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPR 464 (489)
T ss_pred CCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCc
Confidence 999999999999999 99999999999999999999999999999999999999 669987765444 9999999
Q ss_pred CCCCCCcchH
Q 010735 471 MSGFGRDCGL 480 (502)
Q Consensus 471 ~SG~g~~~g~ 480 (502)
.||+|+++..
T Consensus 465 ~sg~g~~~~~ 474 (489)
T cd07126 465 GAGIGTPEAI 474 (489)
T ss_pred ccCCCCHhHH
Confidence 9999998754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-89 Score=709.31 Aligned_cols=427 Identities=40% Similarity=0.655 Sum_probs=403.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhh
Q 010735 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139 (502)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~ 139 (502)
|++++++.|++|++ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+++.+++++.+..+
T Consensus 1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~ 77 (431)
T cd07104 1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKA-AFEVGAAIAILREAAGLPRR 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 8999999999999999999999999999999999999999965 56999999999999887765
Q ss_pred hcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHH-HHHHHHHHHHcCCCCc
Q 010735 140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDG 217 (502)
Q Consensus 140 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~-~~~l~~~l~~aGlP~g 217 (502)
..+...+.. .+...+.+++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g 157 (431)
T cd07104 78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG 157 (431)
T ss_pred hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence 544433332 34567889999999999999999999999999999999999999999999998 5789999999999999
Q ss_pred eEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhc
Q 010735 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 297 (502)
Q Consensus 218 ~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~ 297 (502)
+++++++++.+++..|+.|+++|.|.||||+.+|+.|+++++ .+++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 236 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAG-RHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 999999977778999999999999999999999999999987 7899999999999999999999999999999999999
Q ss_pred cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (502)
Q Consensus 298 ~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (502)
|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++.+||++++.+++++.+++++++.+|+++++||..
T Consensus 237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--- 313 (431)
T cd07104 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--- 313 (431)
T ss_pred cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCc
Q 010735 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 457 (502)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~ 457 (502)
+|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 458 FAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 458 ~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+... +.+||||+|.||+|+++|++|+++|++.|+++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 7654 78999999999999999999999999999985
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-89 Score=707.05 Aligned_cols=425 Identities=37% Similarity=0.585 Sum_probs=397.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhh
Q 010735 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139 (502)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~ 139 (502)
|++++++.|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+++.+++++...+.
T Consensus 1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~ 77 (432)
T cd07105 1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWA-GFNVDLAAGMLREAASLITQ 77 (432)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 8999999999999999999999999999999999999998755 56999999999999988765
Q ss_pred hcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735 140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (502)
Q Consensus 140 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~ 218 (502)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv 157 (432)
T cd07105 78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV 157 (432)
T ss_pred hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence 433333322 3345678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCC---chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHH
Q 010735 219 LNVVPGF---GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295 (502)
Q Consensus 219 ~~~v~g~---~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~ 295 (502)
+|+++++ +.+++..|+.||++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999974 3457899999999999999999999999999987 78999999999999999999999999999999999
Q ss_pred hccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc
Q 010735 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375 (502)
Q Consensus 296 ~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 375 (502)
|.|+||.|+++++||||+++||+|+++|+++++++++| ++++||++++.+++++.+++++++.+|+++++||...
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999988 5789999999999999999999999999999999765
Q ss_pred C-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEE
Q 010735 376 G-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454 (502)
Q Consensus 376 ~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~i 454 (502)
. ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~v 391 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHI 391 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence 3 368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 455 NCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 455 N~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
|++... .+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 392 N~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 392 NGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 998654 478999999999999999999999999999986
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=702.16 Aligned_cols=420 Identities=30% Similarity=0.449 Sum_probs=390.1
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (502)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~ 142 (502)
+.+++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.+++++..++...+
T Consensus 2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (449)
T cd07136 2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK 79 (449)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56899999999 8999999999999999999999999999999999999999977556999999999999987766543
Q ss_pred e-eeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735 143 E-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (502)
Q Consensus 143 ~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~ 218 (502)
. ..+.. .+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv 158 (449)
T cd07136 80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY 158 (449)
T ss_pred CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence 2 22111 2345688999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (502)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~ 298 (502)
+|++++ +.+.+..|+.|+ +|.|.||||+++|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa-~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAA-KHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 999998 556788888775 999999999999999999987 77899999999999999999999999999999999999
Q ss_pred CCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (502)
Q Consensus 299 ~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (502)
+||.|++++|||||++++|+|+++|++++++++.|+|.+ ++++||++++.+++++.++++++ ++++||.... +
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~~-~ 308 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTDR-E 308 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcCC-C
Confidence 999999999999999999999999999999999999987 88999999999999999999763 8999997643 6
Q ss_pred CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcC
Q 010735 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 458 (502)
Q Consensus 379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 458 (502)
|+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||+..
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~ 388 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTI 388 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred C--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 459 A--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 459 ~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 389 MHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred ccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 4 347899999999999999999999999999999877
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-88 Score=699.98 Aligned_cols=423 Identities=27% Similarity=0.402 Sum_probs=391.1
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (502)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~ 142 (502)
++++.|++||+ .|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++....+..+
T Consensus 3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 80 (432)
T cd07137 3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA 80 (432)
T ss_pred HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999 8999999999999999999999999999999999999999876556999999999999887755333
Q ss_pred e-e--eec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735 143 E-V--LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (502)
Q Consensus 143 ~-~--~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~ 218 (502)
. . .+. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv 159 (432)
T cd07137 81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA 159 (432)
T ss_pred CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 2 1 111 11234578999999999999999999999999999999999999999999999999999999995 99999
Q ss_pred EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHh-c
Q 010735 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL-F 297 (502)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~-~ 297 (502)
+|+++| +.+.+..|+.| ++|.|.||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++| +
T Consensus 160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAA-KHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 999999 55678889887 6999999999999999999987 789999999999999999999999999999999999 5
Q ss_pred cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (502)
Q Consensus 298 ~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (502)
|+||.|++++|||||++++|+|+++|++++++++.|+| ++++++||++++.+++++.++++++.. |+++++||... .
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~ 313 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-E 313 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-C
Confidence 99999999999999999999999999999999999999 468899999999999999999999998 89999999763 3
Q ss_pred CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCc
Q 010735 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 457 (502)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~ 457 (502)
+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 393 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDT 393 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 458 FA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 458 ~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
.. ..+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 394 VVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred cccccCCCCCCCCcCcCcCCccccHHHHHHhccCceeeC
Confidence 65 34789999999999999999999999999999853
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-87 Score=695.60 Aligned_cols=423 Identities=30% Similarity=0.426 Sum_probs=389.6
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-HHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010735 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL-HSWAKMGDIPGAANTLRYYAGAADKIH 141 (502)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~~~~~ev~~~~~~l~~~~~~~~~~~ 141 (502)
..+++|++||+ .|+.++..+|.++|++++++|++++++|++++++|+||+ ..++...|+..+++.+++++..+.+..
T Consensus 2 ~~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~ 79 (434)
T cd07133 2 ALLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWM 79 (434)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35788999999 899999999999999999999999999999999999985 566556799999999999998776543
Q ss_pred Ceee-ec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCc
Q 010735 142 GEVL-KM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217 (502)
Q Consensus 142 ~~~~-~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g 217 (502)
+... .. ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++|.++ +|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g 158 (434)
T cd07133 80 KPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDED 158 (434)
T ss_pred CCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcC
Confidence 3221 11 12335688999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred eEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhc
Q 010735 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF 297 (502)
Q Consensus 218 ~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~ 297 (502)
+++++++ +.+.++.|+.|+ +|.|+||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++|+
T Consensus 159 ~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa-~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~ 235 (434)
T cd07133 159 EVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL 235 (434)
T ss_pred eEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHH-hcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhc
Confidence 9999998 456788888776 999999999999999999987 7889999999999999999999999999999999999
Q ss_pred cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-
Q 010735 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG- 376 (502)
Q Consensus 298 ~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~- 376 (502)
|+||.|+++++||||++++|+|+++|+++++++++|+ ++++++||++++.+++++.+++++++.+|+++++||....
T Consensus 236 ~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~ 313 (434)
T cd07133 236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED 313 (434)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcC
Confidence 9999999999999999999999999999999999886 4678999999999999999999999999999999987643
Q ss_pred -CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEc
Q 010735 377 -KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 455 (502)
Q Consensus 377 -~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN 455 (502)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||
T Consensus 314 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN 393 (434)
T cd07133 314 FAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN 393 (434)
T ss_pred CCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 3689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 456 CYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 456 ~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 394 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 394 DTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 8764 4478999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-87 Score=689.67 Aligned_cols=424 Identities=28% Similarity=0.409 Sum_probs=394.1
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (502)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~ 142 (502)
+++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.+++++.......+
T Consensus 2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 79 (433)
T cd07134 2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK 79 (433)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57889999999 8999999999999999999999999999999999999999976557999999999998876544322
Q ss_pred e-eeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735 143 E-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (502)
Q Consensus 143 ~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~ 218 (502)
. ..+.. .+...++.++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~ 158 (433)
T cd07134 80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE 158 (433)
T ss_pred CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence 1 12111 2445689999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (502)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~ 298 (502)
++++++ +.+.+..|+.|+ ++.|.||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++|.+
T Consensus 159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 999999 456888999998 999999999999999999987 67899999999999999999999999999999999999
Q ss_pred CCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (502)
Q Consensus 299 ~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (502)
+||.|+++++||||++++|+|+++|+++++.++.|+| .++++++||++++.+++++.+++++++++|+++++||..+.
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~- 314 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDA- 314 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCC-
Confidence 9999999999999999999999999999999988887 88899999999999999999999999999999999997643
Q ss_pred CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCc
Q 010735 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 457 (502)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~ 457 (502)
.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 394 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDV 394 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 458 FA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 458 ~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+. ..+.+||||+|+||+|+++|++++++|++.|++.
T Consensus 395 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 395 VLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 64 3478999999999999999999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-86 Score=740.87 Aligned_cols=447 Identities=29% Similarity=0.463 Sum_probs=415.2
Q ss_pred eEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735 25 FINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (502)
Q Consensus 25 ~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (502)
+|+|+.. ++..++++||+| +++++++..++.+|+++|++.|++|++ .|+.+|..+|+++|++++++|+++.++|
T Consensus 650 ~~~~~~~---~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~~~eL 724 (1318)
T PRK11809 650 MLEDPVA---AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQMQTL 724 (1318)
T ss_pred cccCcCC---CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 5577322 467899999999 789999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (502)
Q Consensus 104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 183 (502)
+.++++|+|||+.++ ..|+..++++++||+..++... ....++|+|||++|+|||||+.++++++++|
T Consensus 725 ~~l~~~EaGKt~~~A-~~EV~eaidflryyA~~a~~~~-----------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaA 792 (1318)
T PRK11809 725 MGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDF-----------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAA 792 (1318)
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhc-----------CCceeecccEEEEECCCccHHHHHHHHHHHH
Confidence 999999999999965 6799999999999998765421 1246899999999999999999999999999
Q ss_pred HHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 263 (502)
|++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++..|+.||+|+.|.||||+++|+.|.+.++ ..+
T Consensus 793 LaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA-~~l 871 (1318)
T PRK11809 793 LAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLA-GRL 871 (1318)
T ss_pred HHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHh-hhc
Confidence 9999999999999999999999999999999999999999988888999999999999999999999999999877 333
Q ss_pred ------CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 264 ------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 264 ------~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
+|+++|+||+|++||++|||+|.|++.+++++|.++||.|+++++||||++++|+|+++|++.++.+++|+|.+
T Consensus 872 ~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~ 951 (1318)
T PRK11809 872 DPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDR 951 (1318)
T ss_pred ccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK-- 412 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~-- 412 (502)
.++++||+|++.+++++.++|++++.+|++++.|+.... ..|+|+.|||+.. +++.++++|+||||++|++|+
T Consensus 952 ~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~ 1029 (1318)
T PRK11809 952 LSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRN 1029 (1318)
T ss_pred ccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCC
Confidence 999999999999999999999999999999998875432 3599999999973 567889999999999999996
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~ 489 (502)
+++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+.... .+.+||||+|.||+| +.+|++++.+|++.
T Consensus 1030 ~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~ 1109 (1318)
T PRK11809 1030 QLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLAT 1109 (1318)
T ss_pred CHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhcc
Confidence 799999999999999999999999999999999999999999986542 356799999999999 58999999999998
Q ss_pred cE
Q 010735 490 KS 491 (502)
Q Consensus 490 k~ 491 (502)
+.
T Consensus 1110 ~~ 1111 (1318)
T PRK11809 1110 RP 1111 (1318)
T ss_pred CC
Confidence 74
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-86 Score=686.15 Aligned_cols=422 Identities=27% Similarity=0.396 Sum_probs=387.2
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (502)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~ 142 (502)
+++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.++++++.++....
T Consensus 2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (443)
T cd07132 2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK 79 (443)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57899999999 8999999999999999999999999999999999999999987667999999999999887765433
Q ss_pred eeee-c---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735 143 EVLK-M---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (502)
Q Consensus 143 ~~~~-~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~ 218 (502)
.... . ......++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv 158 (443)
T cd07132 80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC 158 (443)
T ss_pred CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence 2111 0 12245788999999999999999999999999999999999999999999999999999999986 99999
Q ss_pred EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (502)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~ 298 (502)
++++++++. ....|+. +++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 159 ~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~-~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 159 YPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred EEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHH-hhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 999999544 4566765 58999999999999999999877 78999999999999999999999999999999999999
Q ss_pred CCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (502)
Q Consensus 299 ~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (502)
+||.|++++|||||++++|+|+++|++++++++.|+| ++++++||++++.+++++.+++++ +++++||..+. .
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~~-~ 308 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTDE-K 308 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccCC-C
Confidence 9999999999999999999999999999999998888 688999999999999999999863 48999997643 6
Q ss_pred CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcC
Q 010735 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 458 (502)
Q Consensus 379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 458 (502)
|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++.
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~ 388 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTI 388 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CC--CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 459 AF--DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 459 ~~--~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
.. .+.+||||+|.||+|+++|.+|+++|++.|++++++.
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 389 MHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred cccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccc
Confidence 43 3779999999999999999999999999999987753
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-86 Score=739.99 Aligned_cols=454 Identities=31% Similarity=0.488 Sum_probs=420.8
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
+.+|+|+... +..++++||+| ++++++++.++.++++++++.|++|++ .|+.+|.++|.++|++++++|+++++
T Consensus 556 ~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~~~ 630 (1208)
T PRK11905 556 APLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAHMP 630 (1208)
T ss_pred cceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 3466776552 56799999999 999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
+|++++++|+||++.++ ..|+..++++++||+..++...+ ...++|+|||++|+|||||+...+++++
T Consensus 631 eL~~l~~~E~GKt~~ea-~~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~ 698 (1208)
T PRK11905 631 ELFALAVREAGKTLANA-IAEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIA 698 (1208)
T ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHH
Confidence 99999999999999975 67999999999999988765421 2457899999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
+||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+++..|+.||+|+.|.||||+++|+.|.+.++..
T Consensus 699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~ 778 (1208)
T PRK11905 699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKR 778 (1208)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999998878999999999999999999999999999988732
Q ss_pred --CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 262 --NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 262 --~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
..+|+++|+|||||+||++|||+|.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+.+
T Consensus 779 ~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~ 858 (1208)
T PRK11905 779 SGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLS 858 (1208)
T ss_pred cCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhcc
Confidence 258999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--CHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEE 416 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~e 416 (502)
+++||+|++.+++++.++|+++...|+.++.|+.... ..|+|+.|||+. + +++.++++|+||||++|++|+ +++|
T Consensus 859 t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dlde 936 (1208)
T PRK11905 859 TDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDR 936 (1208)
T ss_pred CCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHH
Confidence 9999999999999999999999999998887764322 369999999996 3 578899999999999999997 6999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCCC-cchHHHHHhhhhccEEE
Q 010735 417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVV 493 (502)
Q Consensus 417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g~-~~g~~~~~~~~~~k~v~ 493 (502)
+|+++|+++|||+++|||+|.+.++++++++++|+||||+.... .+.+||||+|.||+|. .+|++++++|++.|+++
T Consensus 937 aI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~ 1016 (1208)
T PRK11905 937 VIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTP 1016 (1208)
T ss_pred HHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceee
Confidence 99999999999999999999999999999999999999997653 3568999999999994 99999999999999987
Q ss_pred Ee
Q 010735 494 TP 495 (502)
Q Consensus 494 ~~ 495 (502)
++
T Consensus 1017 ~~ 1018 (1208)
T PRK11905 1017 IP 1018 (1208)
T ss_pred cc
Confidence 65
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-84 Score=671.64 Aligned_cols=418 Identities=29% Similarity=0.448 Sum_probs=384.7
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142 (502)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~ 142 (502)
++++.|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..++...+
T Consensus 2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~ 79 (426)
T cd07087 2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK 79 (426)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 47899999999 8999999999999999999999999999999999999998766666999999999999887665432
Q ss_pred ee-eec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735 143 EV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218 (502)
Q Consensus 143 ~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~ 218 (502)
.. ... ..+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++|.+ |+|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv 158 (426)
T cd07087 80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA 158 (426)
T ss_pred CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence 21 111 1234568899999999999999999999999999999999999999999999999999999999 699999
Q ss_pred EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (502)
Q Consensus 219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~ 298 (502)
+++++++ .+.+..|+.|+ +|.|.||||+++|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 159 ~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 159 VAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHH-hhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 9999984 45688999998 999999999999999999887 77899999999999999999999999999999999999
Q ss_pred CCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (502)
Q Consensus 299 ~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (502)
+||.|+++++||||++++|+|+++|++++++++.++| ++++++||++++.+++++.++++++ ++++||.... +
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~~-~ 308 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVDK-E 308 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccCC-C
Confidence 9999999999999999999999999999999986666 4688999999999999999999764 8999997643 6
Q ss_pred CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcC
Q 010735 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 458 (502)
Q Consensus 379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 458 (502)
|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||+.+
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 388 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVL 388 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred C--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 459 A--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 459 ~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 389 LHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 4 3478999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-82 Score=599.56 Aligned_cols=460 Identities=30% Similarity=0.526 Sum_probs=427.8
Q ss_pred eCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 010735 32 DSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA 111 (502)
Q Consensus 32 ~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 111 (502)
...+.+.++.+.|+||+.+++++.-++.|+++.+..|++||+ .|.+.+...|.++|+.+.+.+.+|.|.+++..++||
T Consensus 59 ~~~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDt 136 (583)
T KOG2454|consen 59 SQQSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDT 136 (583)
T ss_pred CcCCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeeccc
Confidence 334567899999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCCHHHHhhccHHHHHHHHHHHHHhhhh-hcCeeeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcC
Q 010735 112 GKLHSWAKMGDIPGAANTLRYYAGAADK-IHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187 (502)
Q Consensus 112 Gk~~~~~~~~ev~~~~~~l~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaG 187 (502)
||+..++..+||..+.+.+.+.....++ +..+..|.. .-...++.++|+||+..|.|||||+.+.+.+++.||.+|
T Consensus 137 GKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsG 216 (583)
T KOG2454|consen 137 GKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSG 216 (583)
T ss_pred CchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcC
Confidence 9999999999999999999988766543 222222221 224578999999999999999999999999999999999
Q ss_pred CeEEEecCCCcHHHHHHHHHHH----HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735 188 CTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (502)
Q Consensus 188 N~vv~kps~~~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 263 (502)
|++|+|-|+.+.++.....+++ ...|-|++++|++++- ++.+++|.+|+.++.+.|.||..+++.|++.++ +.+
T Consensus 217 NaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AA-k~L 294 (583)
T KOG2454|consen 217 NAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAA-KTL 294 (583)
T ss_pred CeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhh-hhc
Confidence 9999999999999887766654 5569999999999994 478999999999999999999999999999988 899
Q ss_pred CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccc
Q 010735 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343 (502)
Q Consensus 264 ~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~g 343 (502)
+|+++|+|||+++||.+|+|++..+.-++++.|-.+||.|+..+|++||+++||.|+..|.++++.++.|.|...+.+||
T Consensus 295 TPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMG 374 (583)
T KOG2454|consen 295 TPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMG 374 (583)
T ss_pred CcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 344 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
.|++..+++.++.++++|+.+||+++.||.+-. ..|.|++||++.+++++|++++||.||||++++++++.|++|+
T Consensus 375 Am~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~ 454 (583)
T KOG2454|consen 375 AMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIK 454 (583)
T ss_pred hhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHh
Confidence 999999999999999999999999999998642 4799999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
++|+++|||.++||+.|..+++++++.+++|.|.||+... +...+||||+|.||+||+.|.+|++..++.|+|.++
T Consensus 455 lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 455 LANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred hccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 9999999999999999999999999999999999999876 446799999999999999999999999999999665
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-80 Score=647.52 Aligned_cols=428 Identities=51% Similarity=0.841 Sum_probs=403.0
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010735 62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141 (502)
Q Consensus 62 ~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~ 141 (502)
+++++.|++|++ .|+.++.++|.++|+++++.|.++.++|++++++|+||+..+ ...|+..+++.+++++...+...
T Consensus 1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~-~~~ei~~~i~~l~~~~~~~~~~~ 77 (432)
T cd07078 1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEE-ALGEVARAADTFRYYAGLARRLH 77 (432)
T ss_pred CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 368899999999 899999999999999999999999999999999999999884 56799999999999888776654
Q ss_pred Cee-eecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEE
Q 010735 142 GEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220 (502)
Q Consensus 142 ~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~ 220 (502)
+.. .....+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~ 157 (432)
T cd07078 78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN 157 (432)
T ss_pred CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence 433 2223456678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCC
Q 010735 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (502)
Q Consensus 221 ~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~G 300 (502)
++++++.+....|..|+++|.|.||||..+++.|.+.++ .+++|+++|+||++++||++|+|++.|++.+++++|.++|
T Consensus 158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~-~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 999876668899999999999999999999999999987 7789999999999999999999999999999999999999
Q ss_pred CCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CC
Q 010735 301 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KG 379 (502)
Q Consensus 301 q~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g 379 (502)
|.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.++++++..+|+++++||..+.. .|
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g 316 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG 316 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976542 48
Q ss_pred ceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC
Q 010735 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA 459 (502)
Q Consensus 380 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 459 (502)
+|++|||+.+++++++++++|+||||++|++|++++|||+++|+.++||+++|||+|.+.++++++++++|.|+||+++.
T Consensus 317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~ 396 (432)
T cd07078 317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSV 396 (432)
T ss_pred cEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred C-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 460 F-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 460 ~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
. .+.+||||.|.||+|+++|++|+++|++.|+++
T Consensus 397 ~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 397 GAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 6 789999999999999999999999999999874
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-81 Score=648.54 Aligned_cols=415 Identities=25% Similarity=0.332 Sum_probs=373.4
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010735 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140 (502)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~ 140 (502)
++++++.|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+|||..+. ..|+..+++.+++++..++..
T Consensus 1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~-~~ev~~~~~~l~~~a~~~~~~ 77 (454)
T cd07129 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARL-QGELGRTTGQLRLFADLVREG 77 (454)
T ss_pred ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999 8999999999999999999999999999999999999999864 579999999999998876542
Q ss_pred c--Ceeeec-------ccccccceeecCCeEEEEEcCCChhHHh--hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHH
Q 010735 141 H--GEVLKM-------SRALQGYTLREPIGVVGHIIPWNFPTTM--FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 209 (502)
Q Consensus 141 ~--~~~~~~-------~~~~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l 209 (502)
. +..... ..+...+++++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~ 157 (454)
T cd07129 78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI 157 (454)
T ss_pred CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 2 111110 0123457889999999999999999988 4589999999999999999999999999998876
Q ss_pred ----HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC-CCCceEEecCCCCceEEccCC--
Q 010735 210 ----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKPVSLELGGKSPLLIFDDV-- 282 (502)
Q Consensus 210 ----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~-~~~~~~~e~gG~~~~iV~~da-- 282 (502)
.++|+|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.++.+ .++|+++|+|||||+||++|+
T Consensus 158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~ 237 (454)
T cd07129 158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA 237 (454)
T ss_pred HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence 4899999999999997767899999999999999999999999999988732 689999999999999999999
Q ss_pred -CHHHHHHHHHHHHhccCCCCcCCCcEEEEecc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735 283 -DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (502)
Q Consensus 283 -dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (502)
|++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|.++++++++ ||++++.+.++..+.+++
T Consensus 238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 999999999999998865 466777777888888899
Q ss_pred HHHc-CCEEEeCCcccCCCCceEecEEEeeCC---CCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735 361 GKRE-GATLLTGGKPIGKKGYYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436 (502)
Q Consensus 361 a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d 436 (502)
+.++ |+++++||... .+|+|++|||+...+ ++|+++++|+||||++|++|+|.||+|+++|+++|||++||||+|
T Consensus 308 a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d 386 (454)
T cd07129 308 LAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEE 386 (454)
T ss_pred HHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccC
Confidence 9988 99999999764 368999999997555 689999999999999999999999999999999999999999999
Q ss_pred --HHHHHHHHhhc--ceeEEEEcCcCCCC---CCCCcCC-CCCCCCCCc--chHHHHHhhhhc
Q 010735 437 --LNVANTVSRSI--RAGIIWINCYFAFD---SDCPYGG-YKMSGFGRD--CGLESLHNYLQV 489 (502)
Q Consensus 437 --~~~~~~~~~~l--~~g~v~iN~~~~~~---~~~pfgG-~~~SG~g~~--~g~~~~~~~~~~ 489 (502)
.+.++++++++ ++|+|+||+++... +.+|||| +|.||+|++ +|.+++++|+++
T Consensus 387 ~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 387 DDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred chHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 79999999999 69999999875432 5899999 999999999 799999999997
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-80 Score=646.92 Aligned_cols=434 Identities=19% Similarity=0.236 Sum_probs=373.1
Q ss_pred eEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Q 010735 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (502)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (502)
.=.=+||+|++++++++.++. ++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||+.+
T Consensus 66 ~~~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~ 140 (551)
T TIGR02288 66 VGGERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMM 140 (551)
T ss_pred cccccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHH
Confidence 345579999999999999995 899999999999 899999999999999999999999999999999999999986
Q ss_pred Hhh-c---cHHHHHHHHHHHHHhhhhhcCeee---ecc-cc---cccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHc
Q 010735 118 AKM-G---DIPGAANTLRYYAGAADKIHGEVL---KMS-RA---LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAA 186 (502)
Q Consensus 118 ~~~-~---ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~---~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaa 186 (502)
+.. + ++.+.++.+++++....++.+... +.. .. ...+..++|+|||++|+|||||+++.++++++||++
T Consensus 141 a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaa 220 (551)
T TIGR02288 141 AFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLAT 220 (551)
T ss_pred HHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHc
Confidence 532 1 678889999999888776655432 111 11 112347899999999999999999999999999999
Q ss_pred CCeEEEecCCCcHHHHH----HHHHHHHHcCCCCceEEEecCC-chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735 187 GCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (502)
Q Consensus 187 GN~vv~kps~~~~~~~~----~l~~~l~~aGlP~g~~~~v~g~-~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 261 (502)
||+||+|||+.+|+++. .+.++|.++|+|+|++|++++. +.++++.|+.||+|+.|.||||+++|+.|++.++
T Consensus 221 GN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa-- 298 (551)
T TIGR02288 221 GNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR-- 298 (551)
T ss_pred CCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--
Confidence 99999999999999655 5679999999999999999985 6778999999999999999999999999999865
Q ss_pred CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc---------cHHHHHHHHHHHHhcccc
Q 010735 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG---------IYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~---------i~~~f~~~l~~~~~~~~~ 332 (502)
.+++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++ +
T Consensus 299 -~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-v 376 (551)
T TIGR02288 299 -QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-L 376 (551)
T ss_pred -cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-c
Confidence 4799999999999999999999999999999999999999999999999999 7999999999999999 9
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCC-ceEecEEEeeCCCCCcccccceeeceEEE
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKG-YYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 408 (502)
|+|.++.+++|||+++.+++++ ++++..| ++++||.... .+| +|++|||+...+++|++++||+||||++|
T Consensus 377 Gdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V 451 (551)
T TIGR02288 377 GDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFV 451 (551)
T ss_pred CCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEE
Confidence 9999999999999999999996 5566778 6666665421 135 68899999433359999999999999999
Q ss_pred EEeCCHHHHHHHHhcC--CCC-ceEEEecCCHHHHHHHHhhc----------ceeEEEEcCcCCCCCCCCcCCCCCCCCC
Q 010735 409 MKFKTVEEAIKSANNT--RYG-LAAGIMTKDLNVANTVSRSI----------RAGIIWINCYFAFDSDCPYGGYKMSGFG 475 (502)
Q Consensus 409 ~~~~~~~eai~~~n~~--~~g-l~~~v~t~d~~~~~~~~~~l----------~~g~v~iN~~~~~~~~~pfgG~~~SG~g 475 (502)
++|+|.||||+++|++ +|| |+++|||+|.+.++++.+++ ++|.|+||+. .||++.+.||..
T Consensus 452 ~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg~n 525 (551)
T TIGR02288 452 VAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS------AAFSDFHGTGGN 525 (551)
T ss_pred EEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC------CCCCCCCCCCCC
Confidence 9999999999999998 566 99999999999999999999 6677777764 456666666655
Q ss_pred Cc-chHHHHHhhhhccE
Q 010735 476 RD-CGLESLHNYLQVKS 491 (502)
Q Consensus 476 ~~-~g~~~~~~~~~~k~ 491 (502)
.- +..+.-..|...+-
T Consensus 526 ~~a~~~~~~~~~~~~r~ 542 (551)
T TIGR02288 526 PAANASLSDGAFVANRF 542 (551)
T ss_pred CccCCcccchhhhhcce
Confidence 32 23344455555543
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=642.78 Aligned_cols=414 Identities=22% Similarity=0.250 Sum_probs=372.8
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh-
Q 010735 62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI- 140 (502)
Q Consensus 62 ~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~- 140 (502)
+++++.|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||. +. ..|+..+++.+++++..+...
T Consensus 2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~-~~ev~~~i~~~~~~~~~~~~~~ 77 (442)
T cd07084 2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MF-AENICGDQVQLRARAFVIYSYR 77 (442)
T ss_pred hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hh-hhhhcchHHHHHHHHHHHHhcc
Confidence 678999999999 8999999999999999999999999999999999999999 44 469999999999998877543
Q ss_pred -cCeee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCC-C
Q 010735 141 -HGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV-P 215 (502)
Q Consensus 141 -~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGl-P 215 (502)
.+... +.......+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+ |
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P 157 (442)
T cd07084 78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157 (442)
T ss_pred ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence 11111 101124568899999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCC-CHHHHHHHHHHH
Q 010735 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLG 294 (502)
Q Consensus 216 ~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~da-dl~~aa~~iv~~ 294 (502)
++++++++++++ .+..|+.|++++.|.||||+++|+.|++.++ . +|+++|+|||||+||++|| |++.+++.++++
T Consensus 158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~-~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAK-Q--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhcc-C--CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 999999999765 8899999999999999999999999999875 2 8999999999999999999 699999999999
Q ss_pred HhccCCCCcCCCcEEEEecc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCC
Q 010735 295 ILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGG 372 (502)
Q Consensus 295 ~~~~~Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg 372 (502)
+|.|+||.|+++++||||++ ++++|+++|+++++++++| ++.+||++++. +.++++++.+. |+++++||
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCC
Confidence 99999999999999999999 9999999999999999998 67899997664 45556667777 59999999
Q ss_pred cccC------CCCceEecEEEeeCCCCC---cccccceeeceEEEEEeCC--HHHHHHHHhcCCCCceEEEecCCHHHHH
Q 010735 373 KPIG------KKGYYIEPTIFTNVTEDM---LIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVAN 441 (502)
Q Consensus 373 ~~~~------~~g~~~~Ptvl~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~ 441 (502)
.... ..|+|++|||+.+++++| ++++||+||||++|++|+| ++|+|+++|+++|||++||||+|.+.++
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 384 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQ 384 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHH
Confidence 7532 248999999999999997 9999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhc-ceeEEEEcCc--CCCCCCCCcCC-CCCCCCCCcc-hHHHHHhhhhccEE
Q 010735 442 TVSRSI-RAGIIWINCY--FAFDSDCPYGG-YKMSGFGRDC-GLESLHNYLQVKSV 492 (502)
Q Consensus 442 ~~~~~l-~~g~v~iN~~--~~~~~~~pfgG-~~~SG~g~~~-g~~~~~~~~~~k~v 492 (502)
++++++ ++|+||||+. ....+..|||| .|.||+|++. |.+++++|++...+
T Consensus 385 ~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 385 ELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 999999 9999999976 33446677866 8899999986 99999999987644
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-79 Score=640.98 Aligned_cols=449 Identities=18% Similarity=0.218 Sum_probs=391.9
Q ss_pred CCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 010735 33 SVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAG 112 (502)
Q Consensus 33 ~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G 112 (502)
+.++...+++||+|++.+++++.+ |++++|++|++|++ .|++++..+|.++|++++++|.+++++|++++++|+|
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G 135 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG 135 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence 346788999999999999899988 89999999999999 8999999999999999999999999999999999999
Q ss_pred CCHHHHhhc----cHHHHHHHHHHHHHhhhhhcCeeeecc-cc------cccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735 113 KLHSWAKMG----DIPGAANTLRYYAGAADKIHGEVLKMS-RA------LQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (502)
Q Consensus 113 k~~~~~~~~----ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 181 (502)
|+..++... |++++++.++|++....++.+...+.. .+ ......++|+||+++|+|||||+++.+.+++
T Consensus 136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~ 215 (549)
T cd07127 136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF 215 (549)
T ss_pred CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence 999866432 699999999999888776654322111 01 1123478999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCcHHHHH----HHHHHHHHcCCCCceEEEecCC-chhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 182 PALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~----~l~~~l~~aGlP~g~~~~v~g~-~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
+||++||+||+|||+.+|+++. .+.++|.++|+|+|+||++++. +.++++.|+.||+++.|.||||+.+|+.|.+
T Consensus 216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~ 295 (549)
T cd07127 216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA 295 (549)
T ss_pred HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999998864 4668999999999999999985 4678999999999999999999999999999
Q ss_pred HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc---------cHHHHHHHHHHHH
Q 010735 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG---------IYDEFEKKLVEKA 327 (502)
Q Consensus 257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~---------i~~~f~~~l~~~~ 327 (502)
.++ .+|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++ +||+|+++|++++
T Consensus 296 ~a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~ 372 (549)
T cd07127 296 NAR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI 372 (549)
T ss_pred Hhc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence 975 4799999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred hccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCC-ceEecEEEeeCCCCCcccccceee
Q 010735 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKG-YYIEPTIFTNVTEDMLIAKNEIFG 403 (502)
Q Consensus 328 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fg 403 (502)
+++ +|+|.+..+.+|||+++.+++++.+ ++..|+ +++||..+. .+| ++++|||+...+++|++++||+||
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG 446 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG 446 (549)
T ss_pred HHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence 999 9999999999999999999999865 455665 778876542 134 466999999888999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHhcCC--C-CceEEEecCCHHHHHHHHhhc-cee-EEEEcCcCCCCCCC--CcCCCCCCCCCC
Q 010735 404 PVMALMKFKTVEEAIKSANNTR--Y-GLAAGIMTKDLNVANTVSRSI-RAG-IIWINCYFAFDSDC--PYGGYKMSGFGR 476 (502)
Q Consensus 404 Pvl~v~~~~~~~eai~~~n~~~--~-gl~~~v~t~d~~~~~~~~~~l-~~g-~v~iN~~~~~~~~~--pfgG~~~SG~g~ 476 (502)
||++|++|+|.+|||+++|++. + ||+++|||+|.+.++++.+++ ++| .++||.+..+...+ ||||.+.||...
T Consensus 447 PVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~ 526 (549)
T cd07127 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP 526 (549)
T ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc
Confidence 9999999999999999999974 4 599999999999999999995 554 99999766544444 599999999886
Q ss_pred -cchHHHHHhhhhccEEEEe
Q 010735 477 -DCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 477 -~~g~~~~~~~~~~k~v~~~ 495 (502)
.+.......|...+--+++
T Consensus 527 ~a~~~~~~~~fv~~r~~~~~ 546 (549)
T cd07127 527 AANAALTDGAFVANRFRVVQ 546 (549)
T ss_pred ccccccchhhhhhcceEEEE
Confidence 4445777777776644443
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-80 Score=592.44 Aligned_cols=423 Identities=26% Similarity=0.409 Sum_probs=384.0
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010735 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140 (502)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~ 140 (502)
+++.++.+|.+|. .-+..|.+-|.+.|+++.+++++|.+++.+++..|.+|+..++...|+...+..++++....+..
T Consensus 4 ~~~~v~~~R~~F~--sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w 81 (477)
T KOG2456|consen 4 ISETVRRLRLAFS--SGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW 81 (477)
T ss_pred HHHHHHHHHHHHh--cCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 4566899999999 56999999999999999999999999999999999999999888888888888888776654432
Q ss_pred c-Ceeee---cccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCC
Q 010735 141 H-GEVLK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216 (502)
Q Consensus 141 ~-~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~ 216 (502)
. .+..+ .......+++.+|+|||++|+|||||+...+.++++||+|||+||+|||+.+|.++..+++++.++ ++.
T Consensus 82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~ 160 (477)
T KOG2456|consen 82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ 160 (477)
T ss_pred ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence 2 11111 112356789999999999999999999999999999999999999999999999999999999999 999
Q ss_pred ceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHh
Q 010735 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 296 (502)
Q Consensus 217 g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~ 296 (502)
+++.||.|.-+++ ..|..| +.|.|+||||+.+|+.|+.+|+ ++++||++|+|||+|++|++|+|++-++++|+|+++
T Consensus 161 ~~~~VV~Ggv~ET-t~LL~~-rfD~IfyTGsp~VgkIim~aAa-KhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 161 DLIRVVNGGVPET-TELLKQ-RFDHIFYTGSPRVGKIIMAAAA-KHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred ceEEEecCCCchH-HHHHHh-hccEEEecCCchHHHHHHHHHH-hcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 9999999954454 455555 7999999999999999999988 999999999999999999999999999999999999
Q ss_pred ccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 010735 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376 (502)
Q Consensus 297 ~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 376 (502)
.|+||.|.+|++|+++.++++.|+++++..++++. |+...++.+++.+|+..|++|+..++++- .+|+.||..+.
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~ 312 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE 312 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch
Confidence 99999999999999999999999999999999975 55566789999999999999999998653 58999998765
Q ss_pred CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcC
Q 010735 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 456 (502)
Q Consensus 377 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~ 456 (502)
...|+.|||+.|+++++++|+||+|||||+|+.|.+++|+|+++|..+..|++|+||+|.+...++.+++.+|.|.+|+
T Consensus 313 -~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND 391 (477)
T KOG2456|consen 313 -SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVND 391 (477)
T ss_pred -hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecc
Confidence 5679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 457 YFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 457 ~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
... ....+||||+|.||+|++||++|++.|++.|++...
T Consensus 392 ~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 392 VIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred eEEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 755 447899999999999999999999999999998654
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-79 Score=628.55 Aligned_cols=401 Identities=20% Similarity=0.241 Sum_probs=348.8
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhh
Q 010735 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137 (502)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~ 137 (502)
-+|+++++++|++||+ .|++++.++|.++|++++++|+++.++|++++++|+|||..++. ++.+++++...
T Consensus 3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~ 73 (429)
T cd07121 3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT 73 (429)
T ss_pred hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence 3689999999999999 89999999999999999999999999999999999999997642 44555554422
Q ss_pred hhhcCe-ee-ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHH----HH
Q 010735 138 DKIHGE-VL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KL 211 (502)
Q Consensus 138 ~~~~~~-~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l----~~ 211 (502)
...... .. ........+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~ 153 (429)
T cd07121 74 PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE 153 (429)
T ss_pred CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence 111000 00 0011223578899999999999999999999999999999999999999999999999999887 47
Q ss_pred cCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHH
Q 010735 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (502)
Q Consensus 212 aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~i 291 (502)
+|+|+|++|++++++.+.++.|++||+||.|+||||+.+|+.|++. .+|+++|+|||||+||++|||++.|++.+
T Consensus 154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i 228 (429)
T cd07121 154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDI 228 (429)
T ss_pred cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHH
Confidence 8999999999998766789999999999999999999999999874 48999999999999999999999999999
Q ss_pred HHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc--CCEEE
Q 010735 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE--GATLL 369 (502)
Q Consensus 292 v~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--Ga~v~ 369 (502)
++++|+|+||.|++++|||||+++||+|+++|+++ . .++++..+++++.++++++... |++++
T Consensus 229 ~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~ 293 (429)
T cd07121 229 VQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKW 293 (429)
T ss_pred HhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccc
Confidence 99999999999999999999999999999999876 1 1368899999999999998864 68999
Q ss_pred eCCccc---CCCCceEe---cEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCc--eEEEecCCHHHHH
Q 010735 370 TGGKPI---GKKGYYIE---PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNVAN 441 (502)
Q Consensus 370 ~gg~~~---~~~g~~~~---Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~t~d~~~~~ 441 (502)
.||... ...|.|+. |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+.++
T Consensus 294 ~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~ 373 (429)
T cd07121 294 VGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLT 373 (429)
T ss_pred cCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHH
Confidence 998541 12477877 599999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCC--CCcchHHHHHhhhhccEEE
Q 010735 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF--GRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 442 ~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~--g~~~g~~~~~~~~~~k~v~ 493 (502)
++++++++|.||||++.. +.+||||+|.|++ |..-| +|+ +.+|+++
T Consensus 374 ~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~ 421 (429)
T cd07121 374 KMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFT 421 (429)
T ss_pred HHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcC-cCc---cChhhhh
Confidence 999999999999998754 6799999999998 54333 333 5555543
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-79 Score=587.18 Aligned_cols=461 Identities=43% Similarity=0.766 Sum_probs=429.2
Q ss_pred CCCCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 010735 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93 (502)
Q Consensus 14 ~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a 93 (502)
..+....+...||+|+++++++++++..+||.|+.+|++++.++..|+++|+++|+.||+.|.|++++..+|.+.+.+++
T Consensus 414 n~~~~~~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la 493 (881)
T KOG2452|consen 414 NKRTVRMPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLA 493 (881)
T ss_pred ccceecCcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhcc
Confidence 34455666778999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc----cccccceeecCCeEEEEEcCC
Q 010735 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPW 169 (502)
Q Consensus 94 ~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~ 169 (502)
+++++|+++|+.+.+++.|....-+...-+...++.+||++.|.+++.+..+|+. ....+.+.++|+|||.+|.||
T Consensus 494 ~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pw 573 (881)
T KOG2452|consen 494 DLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPW 573 (881)
T ss_pred chhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccC
Confidence 9999999999999999999665544455677889999999999999988887764 334567999999999999999
Q ss_pred ChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcH
Q 010735 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249 (502)
Q Consensus 170 n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~ 249 (502)
|||+..+.|+.+.+|++-- ..+++ -.|++++++|.+.-+++.|..||+++.|-||||++
T Consensus 574 nyplmmlswk~aaclaa~~--------------~k~~e-------~sgvini~~gsgslvg~rls~hpdvrkigftgste 632 (881)
T KOG2452|consen 574 NYPLMMLSWKTAACLAAQV--------------LKFAE-------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTE 632 (881)
T ss_pred CchHHHHHHHHHHHHHHHH--------------hhhhh-------hcceEEEecCCcchhccccccCCccceeccccchH
Confidence 9999999999999997421 11222 24789999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc
Q 010735 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 329 (502)
Q Consensus 250 ~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~ 329 (502)
+|+.|++.++..+.|++.+|+||++|+||..|||+++|++.-..+.|++-|..|++.-|+||.+++.|+|+.++++.+++
T Consensus 633 ig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~ 712 (881)
T KOG2452|consen 633 VGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRK 712 (881)
T ss_pred HHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHh
Confidence 99999999997888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 330 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 330 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
+++|+|+|.+++-||-....|+.++.+|++.++..||++.|||++.+.+|.|++|||+.+++..|-+..||.||||+.|.
T Consensus 713 ~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is 792 (881)
T KOG2452|consen 713 MKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIIS 792 (881)
T ss_pred hccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEE
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred EeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhh
Q 010735 410 KFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 487 (502)
Q Consensus 410 ~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~ 487 (502)
+|+| +|+.++.+|++++||+++|||+|...+.++++.+.+|+|+||.+.-.+...||||+|+||+|...|..++.+|.
T Consensus 793 ~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl 872 (881)
T KOG2452|consen 793 RFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYL 872 (881)
T ss_pred ecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhhe
Confidence 9974 89999999999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred hccEEEEe
Q 010735 488 QVKSVVTP 495 (502)
Q Consensus 488 ~~k~v~~~ 495 (502)
+.|+|++.
T Consensus 873 ~~ktit~e 880 (881)
T KOG2452|consen 873 RVKTVTFE 880 (881)
T ss_pred eeEEEEee
Confidence 99999875
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-77 Score=617.78 Aligned_cols=408 Identities=20% Similarity=0.217 Sum_probs=346.3
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHH--HHHHHHHhhh
Q 010735 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN--TLRYYAGAAD 138 (502)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~--~l~~~~~~~~ 138 (502)
++++++.|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+|||+.++. .++..... ..++++.
T Consensus 1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~--- 74 (439)
T cd07081 1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKD--- 74 (439)
T ss_pred CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhc---
Confidence 4789999999999 89999999999999999999999999999999999999998764 34443333 2222221
Q ss_pred hhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH----HcCC
Q 010735 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGV 214 (502)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~----~aGl 214 (502)
...+...+...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++. ++|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 122222232223446889999999999999999999999999999999999999999999999988888875 7799
Q ss_pred CCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHH
Q 010735 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 294 (502)
Q Consensus 215 P~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~ 294 (502)
|+|++|++++.+.+.++.|+.||+|++|.||||++ +.+.++ +.+||+++|+|||+|+||++|||++.|++.++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa-~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAY-SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHH-hcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999987777899999999999999999987 444555 6789999999999999999999999999999999
Q ss_pred HhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-
Q 010735 295 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK- 373 (502)
Q Consensus 295 ~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~- 373 (502)
+|.|+||.|++.+|||||+++||+|+++|+++. ||+++.++++++.++|+++..+|++++.|+.
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~ 294 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY 294 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence 999999999999999999999999999998873 8999999999999999999999998754432
Q ss_pred c-cCCCCceEecE---EEeeCC--CCCcccccceeeceEEEEEeCCHHHHHHHHhcC----CCCceEEEecCC---HHHH
Q 010735 374 P-IGKKGYYIEPT---IFTNVT--EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT----RYGLAAGIMTKD---LNVA 440 (502)
Q Consensus 374 ~-~~~~g~~~~Pt---vl~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~t~d---~~~~ 440 (502)
. ....|+|+.|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+++
T Consensus 295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a 374 (439)
T cd07081 295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENM 374 (439)
T ss_pred HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHH
Confidence 1 11258899998 998888 999999999999999999999999999999965 899999999999 9999
Q ss_pred HHHHhhcceeEEEEcCcCCC---CCCCCcCCCCCC--CCCCcch-----HHHHHhhhhccEEEE
Q 010735 441 NTVSRSIRAGIIWINCYFAF---DSDCPYGGYKMS--GFGRDCG-----LESLHNYLQVKSVVT 494 (502)
Q Consensus 441 ~~~~~~l~~g~v~iN~~~~~---~~~~pfgG~~~S--G~g~~~g-----~~~~~~~~~~k~v~~ 494 (502)
+++++++++|.|+||++..+ .-..-|||++.+ |.|..+| ..+.++|++.|.|.+
T Consensus 375 ~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 375 NQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 99999999999999976522 223456566544 2333222 346889999888754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-77 Score=622.06 Aligned_cols=408 Identities=20% Similarity=0.237 Sum_probs=353.4
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (502)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 134 (502)
....+|++++++.|++||+ .|+.++.++|.++|++++++|++|.++|++++++|+|||..++.. ..+++++
T Consensus 32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~ 102 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA 102 (465)
T ss_pred ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence 4678999999999999999 899999999999999999999999999999999999999986532 3344444
Q ss_pred Hhhhh---hcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH-
Q 010735 135 GAADK---IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (502)
Q Consensus 135 ~~~~~---~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~- 210 (502)
..... ....... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 103 ~~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 103 EKTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred HHhccccccccCccc-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 43311 1111111 122345788899999999999999999999999999999999999999999999999999876
Q ss_pred ---HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHH
Q 010735 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (502)
Q Consensus 211 ---~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~a 287 (502)
++|+|+|+++++++.+.+.++.|++||+||+|+||||+++|+.|++ ..+|+++|+|||||+||++|||++.|
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence 6899999999999866678899999999999999999999999987 25899999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 010735 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (502)
Q Consensus 288 a~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (502)
++.|++++|.|+||.|++++|||||+++||+|+++|+++. +|+++..+++++.++++++.+++++
T Consensus 257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~ 321 (465)
T PRK15398 257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNK 321 (465)
T ss_pred HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccch
Confidence 9999999999999999999999999999999999998761 2689999999999999865545667
Q ss_pred EEeCCccc---CCCCceE---ecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCc--eEEEecCCHHH
Q 010735 368 LLTGGKPI---GKKGYYI---EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNV 439 (502)
Q Consensus 368 v~~gg~~~---~~~g~~~---~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~t~d~~~ 439 (502)
++.||... ...|.++ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+.
T Consensus 322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~ 401 (465)
T PRK15398 322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDN 401 (465)
T ss_pred hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHH
Confidence 77776421 1246665 4899999999999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
++++++++++|+|+||++.. +.+||||.|.|.+- .+|+.| ...|..|+++.+.
T Consensus 402 a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 402 LNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred HHHHHHhCCceEEEECCCCc--cccCcCCCCCceee-ecccCC-CCccchhhhhhhe
Confidence 99999999999999998753 67999999999852 237777 7777777776543
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-75 Score=605.09 Aligned_cols=415 Identities=18% Similarity=0.159 Sum_probs=361.1
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (502)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 134 (502)
..+.+|+++++++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..+.......+.+++
T Consensus 4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~ 81 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI 81 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999 89999999999999999999999999999999999999988754323334445555444
Q ss_pred HhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHH----HHHHH
Q 010735 135 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF----AHLAK 210 (502)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l----~~~l~ 210 (502)
...+.. +. ...+.+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+ .+++.
T Consensus 82 ~~~~~~-G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~ 159 (488)
T TIGR02518 82 KDMKTI-GI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE 159 (488)
T ss_pred hhCccc-ce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 432222 32 2222345567899999999999999999999999999999999999999999999999985 45558
Q ss_pred HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHH
Q 010735 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (502)
Q Consensus 211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~ 290 (502)
++|+|+|++|++++.+.+.++.|+.||+||+|+||||+..++.+ . ..++|+++|+|||+|+||++|||++.|++.
T Consensus 160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~-~~~~pv~~e~gGn~p~iV~~dADld~Aa~~ 234 (488)
T TIGR02518 160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----Y-SSGTPAIGVGPGNGPAYIERTANVKKAVRD 234 (488)
T ss_pred HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----H-HcCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence 99999999999998777889999999999999999999966443 2 467999999999999999999999999999
Q ss_pred HHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHH-------HhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHH
Q 010735 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK-------AKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGK 362 (502)
Q Consensus 291 iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~-------~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~ 362 (502)
+++++|+|+||.|++.+|||||+++||+|+++|+++ .+.+++|+| .++++++||+++.++++++.+++++++
T Consensus 235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av 314 (488)
T TIGR02518 235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTV 314 (488)
T ss_pred HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcccc
Confidence 999999999999999999999999999999999998 889999996 678899999999999999999999999
Q ss_pred HcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhc----CCCCceEEEecCCHH
Q 010735 363 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN----TRYGLAAGIMTKDLN 438 (502)
Q Consensus 363 ~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~t~d~~ 438 (502)
.+|+++++||.. .+++++++ .+|.||||++|++|+|+||||+++|+ ++|||+++|||+|.+
T Consensus 315 ~~gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~ 379 (488)
T TIGR02518 315 PEDAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKD 379 (488)
T ss_pred CCCCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHH
Confidence 999999999853 24677776 79999999999999999999999887 799999999999999
Q ss_pred HHHHHHhhcceeEEEEcCcCC---------CCCCC--CcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 439 VANTVSRSIRAGIIWINCYFA---------FDSDC--PYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 439 ~~~~~~~~l~~g~v~iN~~~~---------~~~~~--pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
.++++++++++|+|+||++.. +.+.. -||+++.++++ .+-|++++++.|+|....
T Consensus 380 ~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 380 IVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred HHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 999999999999999997542 22222 25666655555 388999999999998765
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-76 Score=605.26 Aligned_cols=388 Identities=22% Similarity=0.265 Sum_probs=341.2
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHh-------hccHHHHH
Q 010735 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAA 127 (502)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~-------~~ev~~~~ 127 (502)
+|++++++.|++||+ .|+.+|..+|.++|++++++|++|.++|++++++|+||+.. ++. ..|+..++
T Consensus 4 ~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~ 81 (417)
T PRK00197 4 EYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIA 81 (417)
T ss_pred hHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHH
Confidence 689999999999999 89999999999999999999999999999999988877642 222 14788899
Q ss_pred HHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHH
Q 010735 128 NTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204 (502)
Q Consensus 128 ~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~ 204 (502)
+.+++++.+++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.+
T Consensus 82 ~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~ 158 (417)
T PRK00197 82 EGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA 158 (417)
T ss_pred HHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence 9999998776543 333222 22335788999999999999986 4 6788999999999999999999999999999
Q ss_pred HHHHH----HHcCCCCceEEEecCCc-hhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735 205 FAHLA----KLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (502)
Q Consensus 205 l~~~l----~~aGlP~g~~~~v~g~~-~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~ 279 (502)
+++++ .++|+|+|++|++++.+ ++.+..|..||++|+|+||||+.+|+.|++.+ ++|+++|+|||||+||+
T Consensus 159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~ 234 (417)
T PRK00197 159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVD 234 (417)
T ss_pred HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEe
Confidence 98885 68999999999999643 45788888899999999999999999998864 59999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (502)
Q Consensus 280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 359 (502)
+|||++.|++.+++++|.|+| .|++++|+|||+++||+|+++|++.+++++.+
T Consensus 235 ~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------- 287 (417)
T PRK00197 235 ESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE-------------------------- 287 (417)
T ss_pred CCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe--------------------------
Confidence 999999999999999999999 99999999999999999999999999987532
Q ss_pred HHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010735 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439 (502)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~ 439 (502)
++ |+... .+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 288 --------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~ 351 (417)
T PRK00197 288 --------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAA 351 (417)
T ss_pred --------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHH
Confidence 11 11110 12 23 9998 5689999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC----CcchHHHHHhhhhccEEEEecCC
Q 010735 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
++++++++++|.|+||++....+..||||.|.||+| +++|.+|+++|++.|+++++.++
T Consensus 352 ~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~ 414 (417)
T PRK00197 352 AERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDGQ 414 (417)
T ss_pred HHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECCCe
Confidence 999999999999999998776778899999999999 99999999999999999886654
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-76 Score=603.10 Aligned_cols=381 Identities=21% Similarity=0.248 Sum_probs=334.7
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHh-------hccHHHHHHHHH
Q 010735 63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAANTLR 131 (502)
Q Consensus 63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~-------~~ev~~~~~~l~ 131 (502)
..++.|++||+ .|+++|.++|.++|++++++|++++++|++++++|+||+.. ++. ..|+..+++.++
T Consensus 2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~ 79 (406)
T cd07079 2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR 79 (406)
T ss_pred hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence 46889999999 89999999999999999999999999999999777666643 221 248889999999
Q ss_pred HHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHH
Q 010735 132 YYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 208 (502)
Q Consensus 132 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~ 208 (502)
+++...+. .+...+. ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..++++
T Consensus 80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~ 156 (406)
T cd07079 80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI 156 (406)
T ss_pred HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence 98876543 2332221 1233567899999999999996 55 67889999999999999999999999999999998
Q ss_pred HH----HcCCCCceEEEecCCch-hHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCC
Q 010735 209 AK----LAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVD 283 (502)
Q Consensus 209 l~----~aGlP~g~~~~v~g~~~-~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dad 283 (502)
+. ++|+|+|++|++++.+. +.++.|..||++|+|+||||+++|+.|++.+ ++|+++|+|||||+||++|||
T Consensus 157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD 232 (406)
T cd07079 157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence 86 89999999999998543 6788899999999999999999999998775 699999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 010735 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR 363 (502)
Q Consensus 284 l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 363 (502)
++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~--------------------------------- 278 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREA--------------------------------- 278 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC---------------------------------
Confidence 99999999999999999 99999999999999999999999887652
Q ss_pred cCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 010735 364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 443 (502)
Q Consensus 364 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~ 443 (502)
|++++ +|... ..|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus 279 -ga~~~-~g~~~---~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~ 349 (406)
T cd07079 279 -GVELR-GDEET---LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERF 349 (406)
T ss_pred -CCEEe-cCHHH---HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHH
Confidence 55654 33221 1377888 689999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeEEEEcCcCCCCCCCCcCCCCCCCC----CCcchHHHHHhhhhccEEEEe
Q 010735 444 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGF----GRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 444 ~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~----g~~~g~~~~~~~~~~k~v~~~ 495 (502)
++++++|.|+||++....+..||||.|.||+ |+++|.+++++|++.|++++.
T Consensus 350 ~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~ 405 (406)
T cd07079 350 LREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG 405 (406)
T ss_pred HHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence 9999999999999877667789999999998 899999999999999998753
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-75 Score=596.76 Aligned_cols=409 Identities=23% Similarity=0.271 Sum_probs=350.4
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHH-HHHHHHHhhhh
Q 010735 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN-TLRYYAGAADK 139 (502)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~-~l~~~~~~~~~ 139 (502)
+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||+.++...|+..+++ .+++++.. +
T Consensus 1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~ 76 (436)
T cd07122 1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K 76 (436)
T ss_pred ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence 4789999999999 89999999999999999999999999999999999999999765447777777 77777652 2
Q ss_pred hcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH----HcCCC
Q 010735 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVP 215 (502)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~----~aGlP 215 (502)
..+. .....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|
T Consensus 77 ~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P 155 (436)
T cd07122 77 TVGV-IEEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP 155 (436)
T ss_pred ceee-eccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence 2222 111223456789999999999999999999999999999999999999999999999999888764 78999
Q ss_pred CceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHH
Q 010735 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295 (502)
Q Consensus 216 ~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~ 295 (502)
+|++|++++.+++.++.|++||+||.|.||||+++++. ++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus 156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~----a~-~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~ 230 (436)
T cd07122 156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKA----AY-SSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK 230 (436)
T ss_pred chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHH----HH-hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence 99999999877778999999999999999999997643 33 56899999999999999999999999999999999
Q ss_pred hccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc-------ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 010735 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW-------VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (502)
Q Consensus 296 ~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~-------~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (502)
|.|+||.|++++|||||+++||+|+++|+++...+ ++|++ .+.++.+||+++..+++++.+++..+..+|++
T Consensus 231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~ 310 (436)
T cd07122 231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTK 310 (436)
T ss_pred hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCe
Confidence 99999999999999999999999999999999887 88888 46778899999999998888887777677777
Q ss_pred EEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcC----CCCceEEEecCCHHHHHHH
Q 010735 368 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT----RYGLAAGIMTKDLNVANTV 443 (502)
Q Consensus 368 v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~t~d~~~~~~~ 443 (502)
++.++ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++++
T Consensus 311 vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~ 375 (436)
T cd07122 311 VLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEF 375 (436)
T ss_pred EEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHH
Confidence 76555 35778899987 56799999999999999999999997 8999999999999999999
Q ss_pred HhhcceeEEEEcCcCCCC-CCCCcC--------CCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 444 SRSIRAGIIWINCYFAFD-SDCPYG--------GYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 444 ~~~l~~g~v~iN~~~~~~-~~~pfg--------G~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
++++++|.||||++..+. -+..++ |.|..|.+...+..+..+|++.++|.+
T Consensus 376 ~~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 376 ALRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred HhhCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 999999999999876411 111111 223334445555678899999888754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-74 Score=622.17 Aligned_cols=383 Identities=21% Similarity=0.230 Sum_probs=341.2
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhC--CCHHHHh---hccHHHHH
Q 010735 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAG--KLHSWAK---MGDIPGAA 127 (502)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~~~---~~ev~~~~ 127 (502)
+++++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++ ++|+| ||+.++. ..|+..++
T Consensus 294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~ 371 (718)
T PLN02418 294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA 371 (718)
T ss_pred HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence 359999999999999 89999999999999999999999999999996 77999 8887643 45999999
Q ss_pred HHHHHHHHhhhhhcCeeee---cccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHH
Q 010735 128 NTLRYYAGAADKIHGEVLK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204 (502)
Q Consensus 128 ~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~ 204 (502)
+.+++++... +..+...+ ...+...++.++|+|||++|+||| |+..+ ++++|||++||+||+|||+.+|.++..
T Consensus 372 ~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~ 448 (718)
T PLN02418 372 ASIRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI 448 (718)
T ss_pred HHHHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence 9999999873 33343332 122333678899999999999999 99999 899999999999999999999999999
Q ss_pred HHHHHHHcCCCCce----EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735 205 FAHLAKLAGVPDGV----LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280 (502)
Q Consensus 205 l~~~l~~aGlP~g~----~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~ 280 (502)
+++++.++ +|+|+ +|+|++ +.+++..|..||+||+|+||||+..+. +.++ ..+||+++|+|||+|+||++
T Consensus 449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~i~---~~aa-~~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKLVS---QIKA-STKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHHHH---HHHH-hcCCCEEEeCCCcceEEEeC
Confidence 99999999 99995 999998 567899999999999999999996444 4444 56899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360 (502)
Q Consensus 281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~ 360 (502)
|||++.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence 999999999999999999 9999999999999999987 2 24789999
Q ss_pred HHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 010735 361 GKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440 (502)
Q Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 440 (502)
|+++|+++ +||.... | ++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+++
T Consensus 569 a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a 637 (718)
T PLN02418 569 LRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVA 637 (718)
T ss_pred HHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHH
Confidence 99999999 6886432 4 243 3 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCC--CCcc--hHHHHHhhhhccEEEEecC
Q 010735 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF--GRDC--GLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 441 ~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~--g~~~--g~~~~~~~~~~k~v~~~~~ 497 (502)
+++++++++|.||||+++...+..||||+|.||+ ||++ |++|+++|++.|++++..+
T Consensus 638 ~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g 698 (718)
T PLN02418 638 EIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNG 698 (718)
T ss_pred HHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCC
Confidence 9999999999999999876677889999999999 9875 9999999999999977543
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-75 Score=555.55 Aligned_cols=469 Identities=27% Similarity=0.414 Sum_probs=428.8
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCc-eEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-H
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGE-AIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE-E 98 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~-~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~-~ 98 (502)
.+|..|||+.+. +.....+.+|++.+ .++++..++..+++.||++|.+|++ .|..+|..+|.+|+++.++++. +
T Consensus 59 evP~vIg~~~v~--t~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlistk 134 (561)
T KOG2455|consen 59 EVPLVIGDKEVY--TNDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLISTK 134 (561)
T ss_pred eccEEECCeeee--cCCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhcch
Confidence 468899999998 45568999999955 7999999999999999999999999 8999999999999999999999 7
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCC-eEEEEEcCCChhHHhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPI-GVVGHIIPWNFPTTMF 176 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~ 176 (502)
++-+|....+...||...++...-+.+.++++|+++..+.++....... ..+..+..+++|+ |.|++|+||||-....
T Consensus 135 yr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~g 214 (561)
T KOG2455|consen 135 YRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGG 214 (561)
T ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeecc
Confidence 7888999999999999997643336688899999999888776543332 4566788889998 9999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
....+||| +||+|++|||..+.++++++.++|+|||+|+|++|+||++++.+++.+..+|++.++.||||..+-+.+.+
T Consensus 215 nLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk 293 (561)
T KOG2455|consen 215 NLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWK 293 (561)
T ss_pred ccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHh-----cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735 257 AAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (502)
Q Consensus 257 ~aa-----~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (502)
+.+ +....+++.|.||||.-+|+++||++.++...++++|.++||.|.+.+|+||+++.++.+.++|.+..++++
T Consensus 294 ~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~ 373 (561)
T KOG2455|consen 294 KVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLK 373 (561)
T ss_pred HHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcc
Confidence 765 335678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 332 VGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 332 ~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
+|+| .|.++.+||+|....++|++++|+.|+.. ..++++||+.++..|+|+.|||+...+|++++|.||+|||||+|+
T Consensus 374 igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVy 453 (561)
T KOG2455|consen 374 IGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVY 453 (561)
T ss_pred cCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEE
Confidence 9997 78899999999999999999999999863 478999999999999999999999999999999999999999999
Q ss_pred EeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC--CCCCCCcCCCCCCCCCC-cchHH
Q 010735 410 KFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLE 481 (502)
Q Consensus 410 ~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~pfgG~~~SG~g~-~~g~~ 481 (502)
.|+| ++|+++++ |.++|||+.+||++|.+.+.+..+.|+ +|+.|||+..+ .....||||.+.||+.. .||++
T Consensus 454 vY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~ 533 (561)
T KOG2455|consen 454 VYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPH 533 (561)
T ss_pred EeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCce
Confidence 9975 89999999 559999999999999999999999885 89999999766 44789999999999885 88899
Q ss_pred HHHhhhhccEEEE
Q 010735 482 SLHNYLQVKSVVT 494 (502)
Q Consensus 482 ~~~~~~~~k~v~~ 494 (502)
-+.+|+.+.+|--
T Consensus 534 ~l~RwtSp~~ikE 546 (561)
T KOG2455|consen 534 YLLRWTSPLSIKE 546 (561)
T ss_pred EEEeecCcchhhh
Confidence 9999999987743
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-74 Score=636.77 Aligned_cols=425 Identities=21% Similarity=0.254 Sum_probs=369.4
Q ss_pred EEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHH
Q 010735 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (502)
Q Consensus 52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~ 131 (502)
.+...+.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++...++..+.+.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~ 82 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY 82 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999 89999999999999999999999999999999999999998765334444444444
Q ss_pred HHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH-
Q 010735 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (502)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~- 210 (502)
++.. .++..+. .........+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 83 ~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~ 160 (862)
T PRK13805 83 NSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD 160 (862)
T ss_pred HHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence 3332 1122221 111223456788999999999999999999999999999999999999999999999999888864
Q ss_pred ---HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHH
Q 010735 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (502)
Q Consensus 211 ---~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~a 287 (502)
++|+|+|++|++++.+.+.++.|+.|+++|.|+||||+.+++ .++ .+++|+++|+|||+|+||++|||++.|
T Consensus 161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~-~~~~pv~~e~gGk~p~iV~~dADl~~A 235 (862)
T PRK13805 161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVK----AAY-SSGKPALGVGAGNVPAYIDKTADIKRA 235 (862)
T ss_pred HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHH----HHH-hcCCCeEEECCCCCeEEEeCCCCHHHH
Confidence 689999999999987777899999999999999999999653 333 678999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 010735 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (502)
Q Consensus 288 a~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (502)
++.|++++|+|+||.|+++++||||++++|+|+++|+++. +|+++..+++++.++++++...|+.
T Consensus 236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~ 300 (862)
T PRK13805 236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALN 300 (862)
T ss_pred HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcC
Confidence 9999999999999999999999999999999999998762 5899999999999999988765553
Q ss_pred E-EeCCccc---CCCCceEecEE------EeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhc----CCCCceEEEe
Q 010735 368 L-LTGGKPI---GKKGYYIEPTI------FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN----TRYGLAAGIM 433 (502)
Q Consensus 368 v-~~gg~~~---~~~g~~~~Ptv------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~ 433 (502)
. +.||... ...|.|++||+ +.+++++|++++ |.||||++|++|+|+||||+++|+ ++|||+++||
T Consensus 301 ~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~ 379 (862)
T PRK13805 301 ADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIY 379 (862)
T ss_pred ccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 2 4466421 12488889987 677889999887 799999999999999999999988 5899999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcC----------CCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCCCCCC
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYF----------AFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 502 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~----------~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~~~ 502 (502)
|+|.+.++++++++++|+|+||.+. .+.+.+|||| |.||.|+++|+.|+++|++.|+|..+...+.||
T Consensus 380 t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 380 TNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred CCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 9999999999999999999999975 3678999997 999999999999999999999999888877775
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-73 Score=556.49 Aligned_cols=451 Identities=31% Similarity=0.481 Sum_probs=409.7
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCC-ceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTG-EAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
-.++|+.+. .+...+++||++. +++++|..++.+|+++|++.|.++++ .|..+|..+|+.+|++++++|+.+..+
T Consensus 116 p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~~ 191 (769)
T COG4230 116 PIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP--IWSATPPAERAAILERAADLMEAQMPQ 191 (769)
T ss_pred cccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 367787775 5788999999994 58999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|..++++|.||+... ...|+.+++++|+||+.+++.-.+ -...+|+|.|++|+|||||+.....+++.
T Consensus 192 L~~L~~REAGKtl~n-aIAEVREAVDFlrYYA~~ar~~~g-----------~~~~~~~G~vVcISPWNFPLAIFtGqiaA 259 (769)
T COG4230 192 LMGLLVREAGKTLSN-AIAEVREAVDFLRYYAGQARDTFG-----------NLTHRPLGPVVCISPWNFPLAIFTGQIAA 259 (769)
T ss_pred HHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhcccC-----------ccccCCCCcEEEECCCCchHHHHHhHHHH
Confidence 999999999999995 578999999999999998765222 14567999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+|+-||.+++|+.+..-.+++.++|+|++++|+++|+++.++..|+.+++++.|+||||+++++.|.++.+.+.
T Consensus 260 AL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~ 339 (769)
T COG4230 260 ALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ 339 (769)
T ss_pred HHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987544
Q ss_pred --CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 263 --LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 263 --~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
..|++.|.||-|.+||+.+|--|.++..++.|+|..+||+|.+.+.+++++++.|..++.|+-.+..+++|+|..-.+
T Consensus 340 g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~t 419 (769)
T COG4230 340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTT 419 (769)
T ss_pred CCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceec
Confidence 467999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--CHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEA 417 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~ea 417 (502)
++||+|+.++.+.+.++|+..+..|-.+..-..... .+|.|+.||++.- + +..-++.|+|||||-|++|+ ++++.
T Consensus 420 DVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El-~-~~~eL~rEVFGPVLHVvRy~~~~l~~v 497 (769)
T COG4230 420 DVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIEL-E-NLDELQREVFGPVLHVVRYKRDELDEV 497 (769)
T ss_pred cccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEc-C-CHHHHHHHhccceeEEEEecHHHHHHH
Confidence 999999999999999999998888744332221111 3799999999953 2 23346899999999999996 69999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhccEE
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 492 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v 492 (502)
|+-+|.++|||+.+|+|+-.+.+.++.+++++|++|||.-.. ...-.||||.|.||+| ..+|+..+..|+..+..
T Consensus 498 i~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 498 IDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred HHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999754 4577899999999999 58899999999976553
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-71 Score=517.21 Aligned_cols=468 Identities=26% Similarity=0.475 Sum_probs=436.3
Q ss_pred eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (502)
Q Consensus 25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (502)
..+|+|-. ++..++.++|++.++|+++..++.+|.+.+++.|++|.+ .|...|...|.++.+++.+.|+...+.|.
T Consensus 23 vy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~lg 98 (507)
T KOG2453|consen 23 VYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNLG 98 (507)
T ss_pred eeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence 46678876 688999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735 105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (502)
Q Consensus 105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 183 (502)
+++++|+||...| -.+|+++-++.++|.....+.+.+..+|.. ++.-....|.|+|+|.+|+.+|||....-|.-+.+
T Consensus 99 ~lvslemgkilae-gvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaia 177 (507)
T KOG2453|consen 99 KLVSLEMGKILAE-GVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIA 177 (507)
T ss_pred hhhhhhhhhHhhh-cchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhh
Confidence 9999999999996 478999999999999999998888887764 55666788999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCcHHHHHHH----HHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 184 LAAGCTMIVKPAEQTPLIALYF----AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l----~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+.+||+|++||.+.+|+++... .+.|.+-.+|++.+....| +.+.++++..+.+++.+.||||+++++.+.+...
T Consensus 178 Mv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vq 256 (507)
T KOG2453|consen 178 MVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQ 256 (507)
T ss_pred hhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHH
Confidence 9999999999999998877654 5556666799999999998 6678999999999999999999999999988765
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
....+..+|+||+|+.||.+|||+..++...++++...+||+|+..+|++||+++||+.+++|+...+++++|+|+|++
T Consensus 257 -arfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~n 335 (507)
T KOG2453|consen 257 -ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSN 335 (507)
T ss_pred -HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCC
Confidence 4456889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+.+||+.++++....+.-+++++..|.++++||+..+.+|+|+.|||++ ...|.+++.+|.|.|||.|.+|.+++||+.
T Consensus 336 tl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~a 414 (507)
T KOG2453|consen 336 TLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIA 414 (507)
T ss_pred ceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhhe
Confidence 9999999999999999999999999999999999988899999999997 889999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhc--ceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
+-|..+.||++||||+|...+-++..-. ++|.|.||-++. ..-+-.|||-|.+|.||+.|.+++++|+++.++++++
T Consensus 415 innev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 415 INNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred eccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence 9999999999999999999999988654 899999999875 3467799999999999999999999999999999999
Q ss_pred CCCC
Q 010735 497 FNSP 500 (502)
Q Consensus 497 ~~~~ 500 (502)
++.+
T Consensus 495 skel 498 (507)
T KOG2453|consen 495 SKEL 498 (507)
T ss_pred cccC
Confidence 8765
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-70 Score=563.17 Aligned_cols=373 Identities=19% Similarity=0.168 Sum_probs=335.3
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh----------hccHHHHHHHHHHHHHh
Q 010735 67 AARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK----------MGDIPGAANTLRYYAGA 136 (502)
Q Consensus 67 ~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~----------~~ev~~~~~~l~~~~~~ 136 (502)
+|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||+.+.. ..|+..+++.+++++..
T Consensus 2 ~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 2 SAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred hHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 6889999 89999999999999999999999999999999999999975322 13788889999988876
Q ss_pred hhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHc---C
Q 010735 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---G 213 (502)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~a---G 213 (502)
..+..+...+. ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|+++..+++++.++ |
T Consensus 80 ~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 80 VGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred cCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 55444433222 2356899999999999999999999 9999999999999999999999999999999999887 9
Q ss_pred CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHH
Q 010735 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 293 (502)
Q Consensus 214 lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~ 293 (502)
+|+++++++++.+.+.+..|+.||++|.|+||||+.+++.+.+.+. .+|+++|+||++|+||++|||++.|++.+++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence 9999999999867778999999999999999999999999988752 6899999999999999999999999999999
Q ss_pred HHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q 010735 294 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373 (502)
Q Consensus 294 ~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~ 373 (502)
++|.| ||.|+++++||||+++||+|+++|+++++. +|++++.||
T Consensus 234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~- 277 (397)
T cd07077 234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQET- 277 (397)
T ss_pred hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCc-
Confidence 99999 999999999999999999999999988764 466777666
Q ss_pred ccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH----HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcce
Q 010735 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE----EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 449 (502)
Q Consensus 374 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~ 449 (502)
.+.|+.|| ++|++.++|+||||++|++|+|++ +|++++|+++|||+++|||+|.+.++++++++++
T Consensus 278 ----~~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~ 347 (397)
T cd07077 278 ----KPLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDT 347 (397)
T ss_pred ----eeeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCE
Confidence 34677776 788999999999999999999986 6667889999999999999999999999999999
Q ss_pred eEEEEcCcCCCC--CCCCcCCCC--CCCCCCcch-HHHHHhhhhccEEE
Q 010735 450 GIIWINCYFAFD--SDCPYGGYK--MSGFGRDCG-LESLHNYLQVKSVV 493 (502)
Q Consensus 450 g~v~iN~~~~~~--~~~pfgG~~--~SG~g~~~g-~~~~~~~~~~k~v~ 493 (502)
|.|+||++.... ..+||||.+ .||+|+++| .+|+++|++.|++.
T Consensus 348 G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 348 ASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 999999987654 678999999 899999999 99999999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-68 Score=546.64 Aligned_cols=363 Identities=51% Similarity=0.816 Sum_probs=340.7
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee-
Q 010735 67 AARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL- 145 (502)
Q Consensus 67 ~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~- 145 (502)
+|+++++ .|+.++.++|.++|+++++.|.++.++|++++++|+|||+.+ ...|+..+++.+++++.+.+...+...
T Consensus 2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~-~~~ev~~~~~~l~~~~~~~~~~~~~~~~ 78 (367)
T cd06534 2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEE-ALGEVARAIDTFRYAAGLADKLGGPELP 78 (367)
T ss_pred hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5788999 899999999999999999999999999999999999999995 567999999999999988766544222
Q ss_pred ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735 146 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (502)
Q Consensus 146 ~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~ 225 (502)
....+...+.+++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..++++|.++|+|++++++++++
T Consensus 79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~ 158 (367)
T cd06534 79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG 158 (367)
T ss_pred ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence 22345667899999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCC
Q 010735 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305 (502)
Q Consensus 226 ~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s 305 (502)
+++..+.|..|+++|.|.||||+++++.|.+.++ ++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|++
T Consensus 159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~-~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-cCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 7668899999999999999999999999999987 678999999999999999999999999999999999999999999
Q ss_pred CcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecE
Q 010735 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 385 (502)
Q Consensus 306 ~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Pt 385 (502)
+++||||++++|+|+++|+ |
T Consensus 238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t 257 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T 257 (367)
T ss_pred CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence 9999999999999999987 6
Q ss_pred EEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCC
Q 010735 386 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDC 464 (502)
Q Consensus 386 vl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~ 464 (502)
|+.+++++++++++|+|||+++|++|++++||++++|++++||+++|||+|.+.++++++++++|.|+||+.+.. .+..
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~ 337 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEA 337 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 777788899999999999999999999999999999999999999999999999999999999999999998876 7899
Q ss_pred CcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 465 PYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 465 pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
||||.|.||+|+++|++++++|++.|++.
T Consensus 338 pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 338 PFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 99999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-69 Score=549.40 Aligned_cols=375 Identities=19% Similarity=0.181 Sum_probs=321.1
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHhCCCH--HH---HhhccHHHHHHHHHHHHHh
Q 010735 68 ARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVL------EALDAGKLH--SW---AKMGDIPGAANTLRYYAGA 136 (502)
Q Consensus 68 A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~--~~---~~~~ev~~~~~~l~~~~~~ 136 (502)
|++||+ .|+++|.++|.++|++++++|++|.++|+++ +++|+|||. .+ ....|+..+++.+++++..
T Consensus 1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~ 78 (398)
T TIGR00407 1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIEL 78 (398)
T ss_pred ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcC
Confidence 577888 8999999999999999999999999999999 899999994 21 1346899999999999988
Q ss_pred hhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHH----H
Q 010735 137 ADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----A 209 (502)
Q Consensus 137 ~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~----l 209 (502)
++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..++++ |
T Consensus 79 a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 79 ADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 7653 443322 23446788999999999999997 6 66888999999999999999999999999999999 5
Q ss_pred HHcCCCCceEEEecCCc-hhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHH
Q 010735 210 KLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA 288 (502)
Q Consensus 210 ~~aGlP~g~~~~v~g~~-~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa 288 (502)
.++|+|+|++|++++.+ +++++.|..||+||+|+||||+.+++.+++. ..+|+++|+|||||+||++|||++.|+
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa 231 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAI 231 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHH
Confidence 69999999999999744 4578889999999999999999999988765 358999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE
Q 010735 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (502)
Q Consensus 289 ~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 368 (502)
+.+++++|.+ ||.|++++|||||+++||+|+++|+++++++++ .+++ .+.+++++..
T Consensus 232 ~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~-------- 288 (398)
T TIGR00407 232 KVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL-------- 288 (398)
T ss_pred HHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc--------
Confidence 9999999965 999999999999999999999999999987643 1221 1334444321
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc
Q 010735 369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 448 (502)
Q Consensus 369 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~ 448 (502)
|| ||++ +.+|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++++++++
T Consensus 289 --g~-----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~ 352 (398)
T TIGR00407 289 --GP-----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVD 352 (398)
T ss_pred --cC-----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCC
Confidence 11 3554 2337899999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEcCcCCCCCCCCcCCCCC----CCCCCcchHHHHHhhhhcc
Q 010735 449 AGIIWINCYFAFDSDCPYGGYKM----SGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 449 ~g~v~iN~~~~~~~~~pfgG~~~----SG~g~~~g~~~~~~~~~~k 490 (502)
+|.|+||+++...+..|||=-.+ ++..+.+|+.+++.|+..|
T Consensus 353 ~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 353 SAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred eeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999999988777889972222 3456788999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-68 Score=580.88 Aligned_cols=380 Identities=18% Similarity=0.187 Sum_probs=326.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc---------------cHH
Q 010735 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG---------------DIP 124 (502)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~---------------ev~ 124 (502)
+++..+++|++||+ .|+.+|.++|.++|++++++|+++.++|+ .++||++.++... |+.
T Consensus 287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~ 360 (715)
T TIGR01092 287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS 360 (715)
T ss_pred HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence 48888999999999 89999999999999999999999999996 4778887754321 366
Q ss_pred HHHHHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHH
Q 010735 125 GAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201 (502)
Q Consensus 125 ~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~ 201 (502)
.+++.+++++.. ....+...+. ..+...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|.+
T Consensus 361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t 437 (715)
T TIGR01092 361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS 437 (715)
T ss_pred HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence 778888888763 3322332211 12333567899999999999999 9999 5899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCc----eEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 202 ALYFAHLAKLAGVPDG----VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 202 ~~~l~~~l~~aGlP~g----~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
+..+++++.++ +|+| +++++++ +++.++.|..|+++|+|+||||+.+|+.|++.++ +|+++|+|||+|+|
T Consensus 438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i 511 (715)
T TIGR01092 438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence 99999999999 9987 6899985 5667888999999999999999999999998852 99999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 357 (502)
|++|||++.|++.++.++|.+ ||.|++++|||||++++|+ | .+.++
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~ 557 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDL 557 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHH
Confidence 999999999986666666554 9999999999999999984 0 25677
Q ss_pred HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
++++.++|++++ ||.... .|+. ..+++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 558 v~~~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~ 628 (715)
T TIGR01092 558 IDMLRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDE 628 (715)
T ss_pred HHHHHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCH
Confidence 788888999985 775431 2432 1367899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCC----cchHHHHHhhhhccEEEEecC
Q 010735 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGR----DCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~----~~g~~~~~~~~~~k~v~~~~~ 497 (502)
+.++++++++++|.|+||++....+..||||+|.||+|+ ++|++++++|++.|+|.+..+
T Consensus 629 ~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g 692 (715)
T TIGR01092 629 NVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKG 692 (715)
T ss_pred HHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCC
Confidence 999999999999999999986666788999999999995 479999999999999987654
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=295.62 Aligned_cols=362 Identities=15% Similarity=0.159 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHH-
Q 010735 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE----EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY- 132 (502)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~- 132 (502)
..++++.+...+...+ ....++.++..+++.++++.+. ..+.+..+.+...+|.+... ....+......++.
T Consensus 4 ~~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~-~~~a~~~l~~~~~r~ 80 (422)
T cd07080 4 APDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEM-LREGLKRLMALFRRE 80 (422)
T ss_pred HHHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHH-HHHHHHHHHHHcCHH
Confidence 3455666666655544 4667888888888888887775 23455666667777777552 23333333333321
Q ss_pred -HHHh-hhhhcC-eeee--cccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHH
Q 010735 133 -YAGA-ADKIHG-EVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207 (502)
Q Consensus 133 -~~~~-~~~~~~-~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~ 207 (502)
.... .+++.. ..+. ...+...+++++|+|||++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..+.+
T Consensus 81 ~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~ 159 (422)
T cd07080 81 NLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR 159 (422)
T ss_pred HHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence 1111 111110 0110 112456688999999999999999999 789999999999999999999999999999999
Q ss_pred HHHHcCCCC----ceEEEe--cCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC-CceEEcc
Q 010735 208 LAKLAGVPD----GVLNVV--PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK-SPLLIFD 280 (502)
Q Consensus 208 ~l~~aGlP~----g~~~~v--~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~-~~~iV~~ 280 (502)
+|.++ +|+ +.++++ +|.+.++++.|..++ |.|+||||+++++.|++.++ .+ +..+|+||| +++|+++
T Consensus 160 ~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~-~~--~~~Le~Ggk~s~~vi~~ 233 (422)
T cd07080 160 SLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLP-PG--CRLIDFGPKYSFAVIDR 233 (422)
T ss_pred HHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCC-CC--CeeeecCCceeEEEecH
Confidence 99999 787 888888 454556888899887 89999999999999999876 43 569999999 5566666
Q ss_pred CC----CHHHHHHHHHHHHhccCCCCcCCCcEEEEeccc---HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735 281 DV----DVNTAADMALLGILFNKGEICVASSRVYVQEGI---YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353 (502)
Q Consensus 281 da----dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i---~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 353 (502)
++ |++.+++.++++++.|+||.|.|+++||||+++ +++|.++|.++++++....|.. ++ +.+...+
T Consensus 234 ~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~ 306 (422)
T cd07080 234 EALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAK 306 (422)
T ss_pred HhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHH
Confidence 68 999999999999999999999999999999999 9999999999999875433321 11 3344444
Q ss_pred HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
+...-..+...+.+....+ +.++ ||+.+..+. +. ....+-.+.|+++++++|++..++. |--|+++|
T Consensus 307 ~~~~r~~~~~~~~~~~~~~----~~~~----~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~ 373 (422)
T cd07080 307 IARARLEAEFYELKGGVSR----DLGW----TVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLA 373 (422)
T ss_pred HHHHHHHHHHHHHhcCCCC----CCCe----EEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEee
Confidence 4443333333222211111 1222 344332222 11 1456678899999999999999986 66799999
Q ss_pred cCCHHHHHHHHhhcc-ee
Q 010735 434 TKDLNVANTVSRSIR-AG 450 (502)
Q Consensus 434 t~d~~~~~~~~~~l~-~g 450 (502)
..+.+. .++++.+. .|
T Consensus 374 ~~~~~~-~~~~~~l~~~G 390 (422)
T cd07080 374 PSPAEL-AELADALAAAG 390 (422)
T ss_pred cChhhH-HHHHHHHHHcC
Confidence 988777 67777774 45
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=283.79 Aligned_cols=386 Identities=19% Similarity=0.241 Sum_probs=306.9
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh------CCCHHHHhh-----ccHHHHH
Q 010735 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA------GKLHSWAKM-----GDIPGAA 127 (502)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------Gk~~~~~~~-----~ev~~~~ 127 (502)
.++.+..+.||+|.. .++.++.++|.+.|.++++.|+.+.++|.++..+|. |.+-...-+ ..+...+
T Consensus 3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma 80 (417)
T COG0014 3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMA 80 (417)
T ss_pred hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHH
Confidence 357778889999988 799999999999999999999999999999877663 433221000 0233334
Q ss_pred HHHHHHHHhhhhhcCeee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHH
Q 010735 128 NTLRYYAGAADKIHGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204 (502)
Q Consensus 128 ~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~ 204 (502)
+.++..+...+++ |+.. ..+.|.+.+..+.|+||+++| |..-........+-||++||+||+|.+..+..+...
T Consensus 81 ~gl~~Va~L~DPv-Gev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~a 157 (417)
T COG0014 81 DGLRQVAALPDPV-GEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAA 157 (417)
T ss_pred HHHHHHhcCCCch-HhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHH
Confidence 4444444444333 2211 124677888999999999999 888888888889999999999999999999999998
Q ss_pred HHHHH----HHcCCCCceEEEecCCch-hHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735 205 FAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279 (502)
Q Consensus 205 l~~~l----~~aGlP~g~~~~v~g~~~-~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~ 279 (502)
+++++ .++|+|++.+|+++..+. .+.+.|.....+|.|+-.||...-+.+.+++ -.||+-.+-|++.++|+
T Consensus 158 i~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyvd 233 (417)
T COG0014 158 IVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYVD 233 (417)
T ss_pred HHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEec
Confidence 87775 567999999999998544 4555666677799999999999999888875 38999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359 (502)
Q Consensus 280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~ 359 (502)
++||+|+|.+-++.++....+ .|++.+.++||+.+.++|+..|.+.+....+
T Consensus 234 ~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gv--------------------------- 285 (417)
T COG0014 234 ESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGV--------------------------- 285 (417)
T ss_pred ccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCe---------------------------
Confidence 999999999999999999988 9999999999999999999999988874211
Q ss_pred HHHHcCCEEEeCCcccCCCCceEecEEEee--CCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 360 HGKREGATLLTGGKPIGKKGYYIEPTIFTN--VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~--~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
++....... .++.+ .+....-+..|...+++.|-.+++++|||+.+|....+|+-+|.|+|.
T Consensus 286 -------elr~d~~~~---------~~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~ 349 (417)
T COG0014 286 -------ELRGDAEAL---------ALLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDY 349 (417)
T ss_pred -------EEEcCHHHH---------HhccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCH
Confidence 111111000 00001 122333467899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCC----CCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYK----MSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~----~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
+.+++|.+.+++..||||.++.|..+.-||=-. .+...+.+||-|++++|..|++....+
T Consensus 350 ~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~G 413 (417)
T COG0014 350 ANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDG 413 (417)
T ss_pred HHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCc
Confidence 999999999999999999999988777775222 234557889999999999999877654
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-27 Score=219.36 Aligned_cols=382 Identities=20% Similarity=0.216 Sum_probs=291.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhCCCHHHHhhc-----cHHHHHHH
Q 010735 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAGKLHSWAKMG-----DIPGAANT 129 (502)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~~~~~-----ev~~~~~~ 129 (502)
+++..+.||.+++ .++.++.++|.++|.+++++|..+..++.++. +.++|....-..+. .+.....-
T Consensus 2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHH
Confidence 4566788999998 89999999999999999999998877776644 34555433311111 12222233
Q ss_pred HHHHHHhhhhhcCeee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHH
Q 010735 130 LRYYAGAADKIHGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 206 (502)
Q Consensus 130 l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~ 206 (502)
++..+. .+...|+.. ....+...+....|+||.++| |..-.-.+..-..-|+++||.+++|....+..+...|.
T Consensus 80 ~~~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~ 156 (433)
T KOG4165|consen 80 LRQIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH 156 (433)
T ss_pred HHHHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence 333333 111122221 123566677888899999999 77666666666778999999999999999999998888
Q ss_pred HHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCC
Q 010735 207 HLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 282 (502)
Q Consensus 207 ~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~da 282 (502)
++..++ |.|.+.+++|.. .+++.+.|..+..||+|+-.||+...+.|.... ..||..+-.|.+.++|++||
T Consensus 157 ~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----kIPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 157 KLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT----KIPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc----cCcccccccceeEEEecccc
Confidence 877655 678899999988 667888888888899999999999999987763 38999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCCcCCCcEEEEeccc-HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 010735 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361 (502)
Q Consensus 283 dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 361 (502)
|+++|.+-+..+++.+.- .|++.+.+++|++. ...|.+.|...++
T Consensus 232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~--------------------------------- 277 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK--------------------------------- 277 (433)
T ss_pred CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------
Confidence 999999988899988875 89999999999984 2344444433332
Q ss_pred HHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 010735 362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441 (502)
Q Consensus 362 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~ 441 (502)
.+|.++.+|..... -..| .++...-++.|.-.-.+++-.+++.++||+.+|..+.+++-+|.|+|.+.++
T Consensus 278 -~~gVtl~agpkl~~-~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae 347 (433)
T KOG4165|consen 278 -EEGVTLHAGPKLAA-LLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAE 347 (433)
T ss_pred -hcCeEEecChhHHh-hcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHH
Confidence 24545544432211 1111 1445556778888888999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC----CcchHHHHHhhhhccEEEEec
Q 010735 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 442 ~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~ 496 (502)
+|.+.+++..|+.|..+.+..+.-||=-.+-|+. +.+||-|++-++..|++....
T Consensus 348 ~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 348 HFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred HHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEecC
Confidence 9999999999999999999999889644444543 467999999999999876543
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.9e-17 Score=164.60 Aligned_cols=372 Identities=16% Similarity=0.134 Sum_probs=237.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH--Hhh-hhhcCeeeec---ccc
Q 010735 79 RFSGAERRGIMLKFADLIEEH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA--GAA-DKIHGEVLKM---SRA 150 (502)
Q Consensus 79 ~~~~~~R~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~--~~~-~~~~~~~~~~---~~~ 150 (502)
.+|.++..++|.++++.+... .....+.+..-+|.+.... .. +......++.-. ... .++ +..... .+.
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~-~~-l~~~~~~~~r~~L~~~l~~el-~~~~~Ld~~~~~ 78 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMV-EY-LEALMRWFRRENLERKLEREL-GNPESLDGWVPR 78 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHH-HH-HHHHHHhcCHHHHHHHHHHhc-CCHhHhhccccc
Confidence 467777778888887777642 2225566666677766532 21 333222222110 000 111 111000 122
Q ss_pred cccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCC----ceEEEe--cC
Q 010735 151 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD----GVLNVV--PG 224 (502)
Q Consensus 151 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~----g~~~~v--~g 224 (502)
...+..+.|.|++++|.|.|.|+..+.. ++.+|++||..|+|+|...+.++..|.+.|.+. .|. ..+.++ ++
T Consensus 79 ~~~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~ 156 (399)
T PF05893_consen 79 GDGYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPG 156 (399)
T ss_pred ccchhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecC
Confidence 3367889999999999999999976665 667888999999999999999999999999887 554 345566 44
Q ss_pred CchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcC
Q 010735 225 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 304 (502)
Q Consensus 225 ~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~ 304 (502)
.+.++.+.+.. ..|.|+.+||.++.+.|.+.+ +..++.+..+.-.+-.+|+.+++++.+++.+..-.+...+|.|.
T Consensus 157 ~d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~--~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCs 232 (399)
T PF05893_consen 157 GDEELEEALSQ--QADAVVAWGGDETIRAIRQPL--PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACS 232 (399)
T ss_pred CchHHHHHHHH--HCCEEEEeCCHHHHHHHHHHc--CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccC
Confidence 45566777764 478999999999999999854 45677777777778888999999999999999999999999999
Q ss_pred CCcEEEEec---ccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH-----HHHHcCCEEEeCCcccC
Q 010735 305 ASSRVYVQE---GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE-----HGKREGATLLTGGKPIG 376 (502)
Q Consensus 305 s~~~v~V~~---~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~Ga~v~~gg~~~~ 376 (502)
||+.|||.. .-.++|.++|.+++++..---|... .+......+....+ .+...+.++. ++.
T Consensus 233 Sp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~--- 301 (399)
T PF05893_consen 233 SPQVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSD--- 301 (399)
T ss_pred CCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC---
Confidence 999999993 3367888888777765321112111 12222222222222 2333333444 221
Q ss_pred CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEc
Q 010735 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWIN 455 (502)
Q Consensus 377 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN 455 (502)
.+. -||+....+ ......++-++.|+++++++|++..++....=-|++++... ....++++.+ ..|.--|=
T Consensus 302 -~~~---~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv 373 (399)
T PF05893_consen 302 -DNS---WTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRIV 373 (399)
T ss_pred -CCC---EEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeeeC
Confidence 111 245543221 22334456689999999999999999987432477877544 4555566543 55633332
Q ss_pred CcCCCCCCCCcCCCC--CCCCCCcchHHHHHhhhh
Q 010735 456 CYFAFDSDCPYGGYK--MSGFGRDCGLESLHNYLQ 488 (502)
Q Consensus 456 ~~~~~~~~~pfgG~~--~SG~g~~~g~~~~~~~~~ 488 (502)
. .|-+. ..| +...|.+-+.+|++
T Consensus 374 ~---------~G~m~~~~~g-~~hDG~~~L~~lvR 398 (399)
T PF05893_consen 374 P---------LGQMLDFDPG-WPHDGMYPLRRLVR 398 (399)
T ss_pred C---------CCcCCCCCCC-CCcCCHhHHHHHhC
Confidence 2 22111 111 23456777877765
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-14 Score=119.48 Aligned_cols=146 Identities=28% Similarity=0.372 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHH-HcCCEEEeCCcccCCCCceEecEEEeeCCCCC
Q 010735 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK-REGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394 (502)
Q Consensus 316 ~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 394 (502)
...+.+.|++..+.+++-+...+.+++ .....|+.++++.-. -.|-.+..-|. .+|+|..||+|. ++|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 456677888888999988877778876 667788888887511 01222222222 378999999998 99999
Q ss_pred cccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCC
Q 010735 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYK 470 (502)
Q Consensus 395 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~ 470 (502)
.++.||+||||+....-.+++|+|.++|+++||....+||.+.+.++.+.+..++|.+.+|.+-. ..+...|.|-+
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 99999999999999999999999999999999999999999999999999999999999998643 34556665543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.7e-10 Score=101.54 Aligned_cols=164 Identities=22% Similarity=0.247 Sum_probs=124.3
Q ss_pred ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 010735 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (502)
Q Consensus 275 ~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~ 354 (502)
-+||.+|.|++.|+..++.+.-.--| ..+...|+|||++.|+|+++++.+++.+. +. +.+...+.|.
T Consensus 7 lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~rs 73 (215)
T PF07368_consen 7 LMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLRS 73 (215)
T ss_pred EEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHHH
Confidence 37999999999999999998765544 56788899999999999999999987652 21 1223345554
Q ss_pred HHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcC-CCCceEEEe
Q 010735 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT-RYGLAAGIM 433 (502)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~~v~ 433 (502)
.+.+ ..-+++.+.+.... .-..-.|.++.|.+.. .+-. --.+|+++..|++..||+++.+.. ...-++|||
T Consensus 74 l~~i---~~l~~~~I~~~~~~--~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsiW 145 (215)
T PF07368_consen 74 LKKI---KCLNAKTIVADFEN--VPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFDSVSIW 145 (215)
T ss_pred HHHH---HhcCCeEEEecccC--CCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcceEEEe
Confidence 4444 45788998884332 1233368888776543 1122 334899999999999999999974 223499999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCC
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFA 459 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~ 459 (502)
++-.+.+.+++.++++..++||+...
T Consensus 146 ~ekla~~Yel~~~l~~~~f~iNC~~V 171 (215)
T PF07368_consen 146 NEKLASAYELAARLPCDTFYINCFNV 171 (215)
T ss_pred CcHHHHHHHHHHhCCCCEEEEEeccC
Confidence 99999999999999999999999754
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.6e-07 Score=102.42 Aligned_cols=110 Identities=18% Similarity=0.129 Sum_probs=86.3
Q ss_pred eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (502)
Q Consensus 144 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~ 223 (502)
.+|.++|..+..+..|+|++++|+||| ..++.+++.||++||+||+||++.++. . .+.+|..+.+.+.
T Consensus 1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~~ 1130 (1208)
T PRK11905 1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARID 1130 (1208)
T ss_pred cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCccccccccc
Confidence 466778999999999999999999999 557889999999999999999988652 1 1225665555542
Q ss_pred CCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC--CceEEec
Q 010735 224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLEL 270 (502)
Q Consensus 224 g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~--~~~~~e~ 270 (502)
.+..+..+++++.|.|+|++++.+.|.++.+++.+ .|++.|.
T Consensus 1131 -----~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1131 -----WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred -----cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 33467778889999999999999999998885543 4444444
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.066 Score=54.50 Aligned_cols=262 Identities=22% Similarity=0.207 Sum_probs=125.2
Q ss_pred cccccceeecCCeEEEEEcCC-ChhHH-hhhhhHHHHHHcCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCceEEEecC
Q 010735 149 RALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 224 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~ALaaGN~vv--~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g 224 (502)
+|.....++.|+--|++..|. .+|+. +++..++||-.+|..=| .-|+...-.....+.-....+|+.+ +--+ |
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G 172 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G 172 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE---
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c
Confidence 566677889999999999993 34442 33555789999987644 4554442233344445556677643 2223 3
Q ss_pred CchhHHHHHHh----CCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCC
Q 010735 225 FGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (502)
Q Consensus 225 ~~~~~~~~l~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~G 300 (502)
|...-.+|.- -|.||.|+=.|..-+..+=..... .-..- .+.++.---+|-|++||.+..+..++.-+=....
T Consensus 173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g-~V~ID-~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~ 249 (412)
T PF00815_consen 173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG-DVGID-MIAGPSEVLVIADETANPEFVAADLLAQAEHDPD 249 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH-S-EES-------EEEEEE-TTS-HHHHHHHHHHHHTT-TT
T ss_pred -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC-CcccC-CCCCCCceEEEECCCCCHHHHHHHHHHHhccCCC
Confidence 4444444433 488999998888765543111111 11111 1111222234557789999998888865544432
Q ss_pred CCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735 301 EICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 378 (502)
Q Consensus 301 q~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 378 (502)
.+-++|..+ ..++..+.+.++++.+. ..+ .++.+..
T Consensus 250 -----a~~vLvt~s~~la~~V~~~v~~~l~~l~---------------r~~-------i~~~sl~--------------- 287 (412)
T PF00815_consen 250 -----AQAVLVTTSEELAEAVEAEVERQLEELP---------------RRE-------IAEKSLE--------------- 287 (412)
T ss_dssp ------EEEEEES-HHHHHHHHHHHHHHHTT-T---------------THH-------HHHHHHT---------------
T ss_pred -----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------chH-------HHHHHHH---------------
Confidence 234555544 23444444444443321 111 1111111
Q ss_pred CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcCc
Q 010735 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINCY 457 (502)
Q Consensus 379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~ 457 (502)
+| .++.++|++||++++|..- .-...|.++|+ ..+..++ .+|.|++..+
T Consensus 288 -----------------------~g---~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~---~~~~~~i~~AGaiFlG~~ 337 (412)
T PF00815_consen 288 -----------------------NG---AIIVVDSLEEAIELANEYA-PEHLELQVEDP---EELLEKIRNAGAIFLGEY 337 (412)
T ss_dssp -----------------------T----EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-SEEEESTT
T ss_pred -----------------------CC---eEEEECCHHHHHHHHHHhh-HHHHHHHHcCH---HHHHHHhhccChhhcCCC
Confidence 11 3556799999999999842 23678889887 4566777 5899999987
Q ss_pred CC---------CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 458 FA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 458 ~~---------~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+. .+.-+|- +|..|+.|.-+...|++..++.
T Consensus 338 tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 338 TPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp --HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEEE
T ss_pred CCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeEE
Confidence 54 1122344 5567888888899999876654
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.3 Score=49.39 Aligned_cols=266 Identities=20% Similarity=0.195 Sum_probs=148.1
Q ss_pred cccccceeecCCeEEEEEcCC-ChhH-HhhhhhHHHHHHcCCeEEE--ecCCC-cHHHHHHHHHHHHHcCCCCceEEEec
Q 010735 149 RALQGYTLREPIGVVGHIIPW-NFPT-TMFFMKVSPALAAGCTMIV--KPAEQ-TPLIALYFAHLAKLAGVPDGVLNVVP 223 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~-n~P~-~~~~~~i~~ALaaGN~vv~--kps~~-~~~~~~~l~~~l~~aGlP~g~~~~v~ 223 (502)
+|.....++.|+--|++..|. .+|+ .+++...+||-.+|..=|+ -|+.. .......|+ ....+|+.+ +--+
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v- 153 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE--VYKV- 153 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe--ehhc-
Confidence 455667888999999999996 3333 2335557799999976543 44422 112222233 446666543 2112
Q ss_pred CCchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhc-CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735 224 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN 298 (502)
Q Consensus 224 g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~ 298 (502)
| |...-.+|. .-|.||.|+=.|..-+..+ ++... .-..- .+.++.--.+|-|++||.+..+..++.-+=..
T Consensus 154 G-GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd 229 (393)
T TIGR00069 154 G-GAQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLVFGDVGID-MPAGPSEVLVIADETANPEFVAADLLSQAEHD 229 (393)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhcCccCcC-CCCCCceEEEEeCCCCCHHHHHHHHHHHhccC
Confidence 2 333333332 3568999987777655442 22220 11111 11112222344567899999888887544333
Q ss_pred CCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 010735 299 KGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376 (502)
Q Consensus 299 ~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 376 (502)
. . .+.++|..+ +.++..+++.+++..+. .. +..+.+..+
T Consensus 230 ~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r~----~i~~~al~~------------ 270 (393)
T TIGR00069 230 P----D-AQAILVTTSEELAEAVQEEIERQLATLP------------------RR----EIARKSLED------------ 270 (393)
T ss_pred C----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------hH----HHHHHHHHh------------
Confidence 2 2 334555443 34555555555554431 01 112222221
Q ss_pred CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEc
Q 010735 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWIN 455 (502)
Q Consensus 377 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN 455 (502)
+| .++.++|++||++++|..-. -..-|.++|+ ..+..++ .+|.|++.
T Consensus 271 -------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p---~~~l~~I~nAGaiFlG 318 (393)
T TIGR00069 271 -------------------------NG---AIILVDDLEEAIEISNDYAP-EHLELQTKNP---EELLPKIRNAGSIFLG 318 (393)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCH---HHHHhhcCccceeccC
Confidence 11 34567999999999998532 3456888886 3456666 58999998
Q ss_pred CcCCC--CCCC--CcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 456 CYFAF--DSDC--PYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 456 ~~~~~--~~~~--pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
.++.. ..+. |-.=...+|..|+.+.-+...|+++.++.
T Consensus 319 ~~tp~a~GDY~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 319 PYTPEAAGDYAAGPNHVLPTGGTARFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred CCCchhhhhccCCCCcccCCCcceeecCCccHHHhccceeEE
Confidence 86541 1111 11113356678888888999999887654
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.2 Score=50.69 Aligned_cols=267 Identities=20% Similarity=0.243 Sum_probs=146.9
Q ss_pred ccccccceeecCCeEEEEEcC---CChhHHhhhhhHHHHHHcCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCceEEEe
Q 010735 148 SRALQGYTLREPIGVVGHIIP---WNFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 222 (502)
Q Consensus 148 ~~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~i~~ALaaGN~vv--~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v 222 (502)
.+|.....++.|+--|++..| .-||-..++. .+||-.+|+.=| .-|.+..- .+..+.-....+|+.+ +--+
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~-avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e--Iy~v 180 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMN-AVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE--VYKV 180 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChHHHHHh-hccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH--HHHc
Confidence 356667788999999999999 5666555554 678999998644 44554422 2222223334445332 1111
Q ss_pred cCCchhHHHHHHhC----CCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCc-eEEccCCCHHHHHHHHHHHHhc
Q 010735 223 PGFGPTAGAAIASH----MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP-LLIFDDVDVNTAADMALLGILF 297 (502)
Q Consensus 223 ~g~~~~~~~~l~~~----~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~-~iV~~dadl~~aa~~iv~~~~~ 297 (502)
| |.+...+|.-. +.||.|+=.|..-+..+ |... ....-+=+..|-..- +|-|+++|.+..+..++.-+=.
T Consensus 181 -G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v-~g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEH 255 (425)
T COG0141 181 -G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLV-SGVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEH 255 (425)
T ss_pred -c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHh-hCCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhc
Confidence 2 44444555544 78999988887654432 2222 111111111122222 4446679999988887755433
Q ss_pred cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (502)
Q Consensus 298 ~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (502)
+. . .+.|+|..+ ++|.++..+.+.+..-.- .+ .+ .+..+..
T Consensus 256 d~----~-a~aiLvT~s--~~la~~v~~~v~~~l~~l------------~~--~e----i~~~~l~-------------- 296 (425)
T COG0141 256 DP----D-AQAILVTDS--EELAEAVEAAVERQLETL------------PR--AE----IARKALE-------------- 296 (425)
T ss_pred CC----C-ceEEEEeCc--HHHHHHHHHHHHHHHHhc------------cH--HH----HHHHHHH--------------
Confidence 32 2 344566554 455555544444311000 00 11 1121111
Q ss_pred CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcC
Q 010735 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINC 456 (502)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~ 456 (502)
-|| .|+-++|++||++++|..- .-..-|.++|+. .+..++ ++|.|+++.
T Consensus 297 -----------------------~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~---~~l~~I~nAGsIFlG~ 346 (425)
T COG0141 297 -----------------------NYG---AIILVDDLDEAVEISNEYA-PEHLELQTENPR---ELLGKIRNAGSIFLGH 346 (425)
T ss_pred -----------------------hCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHH---HHHHHhcccceeeecC
Confidence 111 4556799999999999853 245678888864 466666 579999999
Q ss_pred cCCCC--CC--CCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 457 YFAFD--SD--CPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 457 ~~~~~--~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
++... .+ .|-.=...+|+-|+.+.-++..|++.-++
T Consensus 347 ~sPe~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv 386 (425)
T COG0141 347 YSPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTV 386 (425)
T ss_pred CCCccccccccCCCccCCCCccchhcCCccHHHhhhHHHH
Confidence 75421 10 01111234566677777788888776543
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.39 Score=48.90 Aligned_cols=266 Identities=16% Similarity=0.194 Sum_probs=147.3
Q ss_pred cccccceeecCCeEEEEEcCC-ChhHH-hhhhhHHHHHHcCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCceEEEecC
Q 010735 149 RALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 224 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~ALaaGN~vv~--kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g 224 (502)
.+.....++.|+--|++..|. .+|+. +++...+||-.+|..=|+ -|++... ....+.-....+|+.+ +--+ |
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e--Iy~i-G 175 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ--VFQV-G 175 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe--eecc-C
Confidence 445556788899999999995 44442 335557899999987554 4443211 1222222345666543 2222 2
Q ss_pred CchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHh-cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccC
Q 010735 225 FGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299 (502)
Q Consensus 225 ~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa-~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~ 299 (502)
|...-.+|. .-|.||.|+=.|..-+..+ |+.. ..-..- ...++.---+|-|++||.+..+..++.-+=...
T Consensus 176 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~ 251 (416)
T PRK13770 176 -GAQSIAALTYGTETIPKVDKIVGPGNQFVAYA--KKYLFGQVGID-QIAGPTEIALIIDETADLDAIVYDVFAQAEHDE 251 (416)
T ss_pred -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhcCCcCcC-CCCCCceeEEEecCCCCHHHHHHHHHHHhccCC
Confidence 333333332 2568999987777654432 2211 011111 111222223445677999998888875443332
Q ss_pred CCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735 300 GEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (502)
Q Consensus 300 Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (502)
. .+.++|..+ +.++..+++.+++..+. + . +.++.+..+
T Consensus 252 ----~-a~~iLvT~s~~la~~V~~ev~~ql~~lp----------------r--~----~i~~~al~~------------- 291 (416)
T PRK13770 252 ----L-ARTYVISEDAQVLKDLESRIAKALPNVD----------------R--Y----DIVSKSIAN------------- 291 (416)
T ss_pred ----C-CcEEEEeCCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHHHh-------------
Confidence 2 334555333 34555555555554431 0 0 112222211
Q ss_pred CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcC
Q 010735 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINC 456 (502)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~ 456 (502)
+| .++-++|+|||++++|..-. -..-|.++|+ ..+..++ .+|.|++..
T Consensus 292 ------------------------~g---~ii~v~~~eeai~~~N~~AP-EHLel~~~~~---~~~l~~i~nAGaiFlG~ 340 (416)
T PRK13770 292 ------------------------QH---YLIHASNFDEACHVMNTIAP-EHASIQTVNP---QPYIEKVKYVGALFIGH 340 (416)
T ss_pred ------------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCH---HHHHhhCCEeceeccCC
Confidence 11 34567999999999998532 3456888887 4566666 579999987
Q ss_pred cCC--CCCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 457 YFA--FDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 457 ~~~--~~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++. ...+ .|-.=...+|..|+.+.-+...|++..++.
T Consensus 341 ~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 341 YSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred CCchhhhccccCCCCcCCCCcceeccCCCcHHHeecceeeE
Confidence 654 1111 111113355677777778999999876654
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.48 Score=48.48 Aligned_cols=263 Identities=23% Similarity=0.247 Sum_probs=147.8
Q ss_pred cccccceeecCCeEEEEEcCC---ChhHHhhhhhHHHHHHcCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735 149 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~ALaaGN~vv--~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~ 223 (502)
+|.....++.|+--|++..|. -||-.. +...+||-.+|..=| .-|+.... ....+.-....+|+.+ +--+
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e--Iy~v- 184 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPSSV-LMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE--VYKV- 184 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchHHH-HHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe--eecc-
Confidence 455566788899999999996 344433 555789999997654 44543111 2222333446666543 2222
Q ss_pred CCchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhc-CCCCceEEecCCCCc--eEEccCCCHHHHHHHHHHHHh
Q 010735 224 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGGKSP--LLIFDDVDVNTAADMALLGIL 296 (502)
Q Consensus 224 g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~~~e~gG~~~--~iV~~dadl~~aa~~iv~~~~ 296 (502)
| |...-.+|. .-|.||.|+=.|..-+..+ ++... .-..- -..|-+= +|-|++||.+..+..++.-+=
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~vAaDLLaQAE 258 (425)
T PRK00877 185 G-GAQAIAALAYGTESIPKVDKIVGPGNIYVTAA--KRLVFGVVGID---MIAGPSEILVIADETADPDFVAADLLSQAE 258 (425)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHHcCCcCcC---CCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence 2 333334443 3468999988887654432 22210 11111 1123332 344667999998888876543
Q ss_pred ccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc
Q 010735 297 FNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374 (502)
Q Consensus 297 ~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 374 (502)
... . .+.++|..+ +.++..+++.+++..+. + . +..+.+..+
T Consensus 259 Hd~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r--~----~ia~~sl~~---------- 301 (425)
T PRK00877 259 HDP----D-AQSILVTTSEELAEAVAAEVERQLATLP----------------R--A----EIARASLEG---------- 301 (425)
T ss_pred cCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHHHh----------
Confidence 332 2 334555444 34444444444444321 0 0 111222211
Q ss_pred cCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEE
Q 010735 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIW 453 (502)
Q Consensus 375 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~ 453 (502)
+| .|+.++|+|||++++|..-. -...|.++|+. .+..++ .+|.|+
T Consensus 302 ---------------------------~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p~---~~l~~I~nAGaiF 347 (425)
T PRK00877 302 ---------------------------QG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDPR---ALLDRIRNAGAIF 347 (425)
T ss_pred ---------------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHH---HHHhhcCccceec
Confidence 12 34567999999999998532 35668888874 455666 589999
Q ss_pred EcCcCC--CCCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 454 INCYFA--FDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 454 iN~~~~--~~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+..++. ...+ .|-.=...+|..|+.+.-+...|++.-++.
T Consensus 348 lG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 348 LGPYTPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred cCCCCchhhhhcccCCCcccCCCcceeecCCccHHHhccceeEE
Confidence 988654 1111 111123456778888888999999886654
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.55 Score=48.14 Aligned_cols=263 Identities=22% Similarity=0.243 Sum_probs=146.3
Q ss_pred cccccceeecCCeEEEEEcCC---ChhHHhhhhhHHHHHHcCCeEE--EecCCCc-HHHHHHHHHHHHHcCCCCceEEEe
Q 010735 149 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMI--VKPAEQT-PLIALYFAHLAKLAGVPDGVLNVV 222 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~ALaaGN~vv--~kps~~~-~~~~~~l~~~l~~aGlP~g~~~~v 222 (502)
+|.....++.|+.-|++..|. -||-. ++..++||-.+|..=| .-|+... ......|+ ..+.+|+.+ +--+
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v 185 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPST-ALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH--ILKA 185 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHH-HHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe--eecc
Confidence 455566888999999999996 34443 3555789999987644 4454321 12223333 446666543 2212
Q ss_pred cCCchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhcCCCCc--eEEe-cCCCCc--eEEccCCCHHHHHHHHHH
Q 010735 223 PGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKP--VSLE-LGGKSP--LLIFDDVDVNTAADMALL 293 (502)
Q Consensus 223 ~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~--~~~e-~gG~~~--~iV~~dadl~~aa~~iv~ 293 (502)
| |.+.-.+|. .-|.||.|+=.|..-+..+ ++.. . +.+ |-.. ..|-+= +|-|++||.+.++..++.
T Consensus 186 -G-GaQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v-~-G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLa 259 (431)
T PLN02926 186 -G-GAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAA--KMIL-Q-NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLS 259 (431)
T ss_pred -C-CHHHHHHHHcCCCCCCCCCEEECCCcHHHHHH--HHHh-h-CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 2 333333443 2468999988887655432 2211 0 110 1111 123332 444667999998888876
Q ss_pred HHhccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeC
Q 010735 294 GILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371 (502)
Q Consensus 294 ~~~~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 371 (502)
-+=... . .+.++|..+ +.++..+++.++++.+. + .+..+.+...
T Consensus 260 QAEHdp----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~------- 305 (431)
T PLN02926 260 QAEHGP----D-SQVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGH------- 305 (431)
T ss_pred HhccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHC-------
Confidence 543332 2 334555444 23444444444444321 0 0111111111
Q ss_pred CcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-cee
Q 010735 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAG 450 (502)
Q Consensus 372 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g 450 (502)
-.|+.++|++||++++|..-. -...|.++|+ ..+..++ .+|
T Consensus 306 ----------------------------------g~iivv~~l~ea~~~~N~~AP-EHLei~~~~~---~~~l~~i~nAG 347 (431)
T PLN02926 306 ----------------------------------SFIVVARDMAEAISFSNLYAP-EHLIVNVEDA---ESWLDKIDNAG 347 (431)
T ss_pred ----------------------------------CEEEEECCHHHHHHHHHhhCh-HhheehhcCH---HHHHhhcCccc
Confidence 134577999999999998432 3556888887 3456666 589
Q ss_pred EEEEcCcCC--CCCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 451 IIWINCYFA--FDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 451 ~v~iN~~~~--~~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
.|++..++. ...+ -|-.=...+|.+|+.|.-+...|++.-++.
T Consensus 348 aiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 348 SVFLGRWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred eeccCCCCchhhhccccCcCcccCCCcceeecCCCcHHHhcceeeEE
Confidence 999987643 1111 111112345677888888999999876653
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.71 Score=46.34 Aligned_cols=255 Identities=18% Similarity=0.160 Sum_probs=138.7
Q ss_pred cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchh
Q 010735 149 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT 228 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~ 228 (502)
+|.....++.|+--|++..|.-||- +++...+||-.+|..=|+--+|-.......|+ ....+|..+ +--+ | |..
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-aa~~~Gv~e--Iy~v-G-GAQ 156 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-VAKELGVKG--VLAI-G-GPH 156 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-HHHHcCCCe--eecc-c-CHH
Confidence 5555677889999999999965554 44556789999998755433221112222233 446666543 2222 2 333
Q ss_pred HHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcE
Q 010735 229 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308 (502)
Q Consensus 229 ~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~ 308 (502)
.-.++...-.||.|+=.|..-+..+ |+.. ....-+=+--|-..-+||-+++|.+..+..++.-+=... . .+.
T Consensus 157 AIAa~a~gt~VDkIvGPGN~yV~~A--K~~v-~g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~----~-a~~ 228 (368)
T PRK13769 157 GLAYAVFHMGVDMVAGPGGLYVQAA--KYVL-SQYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP----T-SFA 228 (368)
T ss_pred HHHHHhcCCCcCEEECCCcHHHHHH--HHHH-hCCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC----C-CcE
Confidence 3345555557898887777654432 2211 111111111133333455556888877777664332221 2 344
Q ss_pred EEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEe
Q 010735 309 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 388 (502)
Q Consensus 309 v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~ 388 (502)
++|..+ +++.++..+.+++. +.. + .|.
T Consensus 229 iLvT~s--~~la~~V~~~v~~~---------------------------~~~-----~-----------~~~-------- 255 (368)
T PRK13769 229 YLLSTD--AELLKAAEEIYRRE---------------------------RTS-----S-----------MGP-------- 255 (368)
T ss_pred EEEECC--HHHHHHHHHHHHHH---------------------------HHh-----c-----------CCC--------
Confidence 555554 35555554444320 000 0 000
Q ss_pred eCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcCcCCCCCCC--C
Q 010735 389 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINCYFAFDSDC--P 465 (502)
Q Consensus 389 ~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~~~~--p 465 (502)
..|+.++|++||++++|..-. -...|.+.+ .+..++ .+|.|+++.+.....+. |
T Consensus 256 -----------------~~iivv~~leeai~~~N~~AP-EHLel~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGp 312 (368)
T PRK13769 256 -----------------LEVRKVAGVEEAVRFIDEIAP-EHLEVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGI 312 (368)
T ss_pred -----------------CeEEEECCHHHHHHHHHhhCh-HheEeeCcH-----HHHhhCCccCChhcCCchhhhccccCC
Confidence 256788999999999998432 233444422 244566 58999996543322111 1
Q ss_pred cCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 466 YGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 466 fgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
-.=...+|.+|+.|.-+...|+++-++.
T Consensus 313 NHvLPT~G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 313 SHVLPTGGTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred CCcCCCCcceeccCCCcHHHcccceeEE
Confidence 1113355677888888899998876654
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.87 Score=46.24 Aligned_cols=291 Identities=22% Similarity=0.196 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCC-hhHH-hhhhhHHHHHHcCCeEE--EecCCCc
Q 010735 123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN-FPTT-MFFMKVSPALAAGCTMI--VKPAEQT 198 (502)
Q Consensus 123 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n-~P~~-~~~~~i~~ALaaGN~vv--~kps~~~ 198 (502)
+..+.+.++.|.....+. .......+|.....++.|+--|++..|.- +|+. +++...+||-.+|..=| .-|+...
T Consensus 57 i~~A~~nI~~fh~~q~~~-~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~ 135 (390)
T cd06572 57 IELAAENIRAFHEAQLPK-DWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKD 135 (390)
T ss_pred HHHHHHHHHHHHHHhCCC-CeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCC
Confidence 444555555554433221 11111224666778899999999999964 4443 33555789999997654 4454321
Q ss_pred HHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC
Q 010735 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (502)
Q Consensus 199 ~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~ 274 (502)
......+.-....+|..+ +--+ | |.....+|. ..|.||.|+=.|..-+..+ ++.. ....- +=-..|-+
T Consensus 136 g~i~p~iL~aa~~~Gv~e--iy~v-G-GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v-~g~V~-ID~~AGPS 207 (390)
T cd06572 136 GKINPAILAAAKLAGVDE--IYKV-G-GAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLV-SGDVG-IDMPAGPS 207 (390)
T ss_pred CCCCHHHHHHHHHcCCcE--Eecc-C-CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHh-cCCcC-ccCCCCCc
Confidence 112222222345566443 2222 2 333334443 3678999987777655442 2222 11000 11112222
Q ss_pred --ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHH
Q 010735 275 --PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQ 350 (502)
Q Consensus 275 --~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~ 350 (502)
-+|-|++||.+..+..++.-+=.. -. .+.++|..+ +.++..+.+.++++.+. ..
T Consensus 208 EvlIiAD~~A~p~~vAaDLLaQAEH~----~~-a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~-- 265 (390)
T cd06572 208 EVLVIADETANPEFVAADLLSQAEHD----PD-SQAILVTTSEELAEAVEEEVERQLAELP---------------RR-- 265 (390)
T ss_pred eEEEEeCCCCCHHHHHHHHHhhhccC----CC-CeEEEEECCHHHHHHHHHHHHHHHHhCC---------------cH--
Confidence 244566799999888877543322 12 334555444 23444444444444331 00
Q ss_pred HHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceE
Q 010735 351 FDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 430 (502)
Q Consensus 351 ~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 430 (502)
+ .++.+..+ + -.++.++|++|+++++|..- .-..
T Consensus 266 -~----~~~~~~~~-------------------------------------~---g~ii~~~~~~eai~~~N~~A-PEHL 299 (390)
T cd06572 266 -E----IAAKSLLD-------------------------------------Y---GAIILVDDLEEAIELANEYA-PEHL 299 (390)
T ss_pred -H----HHHHHHHh-------------------------------------C---CEEEEECCHHHHHHHHHhhc-hhhh
Confidence 0 11111110 1 13456799999999999853 2356
Q ss_pred EEecCCHHHHHHHHhhc-ceeEEEEcCcCCC--CCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 431 GIMTKDLNVANTVSRSI-RAGIIWINCYFAF--DSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 431 ~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~--~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
-|.++|+.. +..++ .+|.|++..++.. ..+ -|-.=...+|..|+.+.-+...|+++-++.
T Consensus 300 el~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT~G~Ar~~sgL~v~~F~K~~s~~ 364 (390)
T cd06572 300 ELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKRITVQ 364 (390)
T ss_pred eeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCCCcceeecCCCCHHHheecceeE
Confidence 788888744 55666 5899999986541 111 111112345667777778889999876654
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.94 Score=46.39 Aligned_cols=266 Identities=17% Similarity=0.154 Sum_probs=147.6
Q ss_pred cccccceeecCCeEEEEEcCC-ChhHH-hhhhhHHHHHHcCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCceEEEecC
Q 010735 149 RALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 224 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~ALaaGN~vv--~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g 224 (502)
.|.....++.|+--|++..|. .+|+. +++...+||-.+|..=| .-|+.........|+ ....+|+.+ +--+ |
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e--Iy~v-G 180 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE--IYVL-G 180 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe--ehhc-C
Confidence 455566788999999999995 44442 33556789999997654 344432112222333 445666543 1112 2
Q ss_pred CchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhc-CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccC
Q 010735 225 FGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299 (502)
Q Consensus 225 ~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~ 299 (502)
|...-.+|. .-|.||.|+=.|..-+..+ ++... .-..- .+.++.---+|-|++||.+..+..++.-+=...
T Consensus 181 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~ 256 (426)
T PRK12447 181 -GVQAVAAMAYGTETIKPVDMLVGPGNAYVAEA--KRQLFGRVGID-LFAGPTETLVIADDTADPELVATDLLGQAEHGP 256 (426)
T ss_pred -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhcCccCcC-CCCCCceeEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 333333332 3468999988887665442 22110 11111 111122222445667999998888876543332
Q ss_pred CCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735 300 GEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377 (502)
Q Consensus 300 Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 377 (502)
. .+.++|..+ +.++..+++.++++.+. + . +..+.+..+
T Consensus 257 ----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r--~----~i~~~sl~~------------- 296 (426)
T PRK12447 257 ----N-SPAVLITTSRKLAEEVLAEIERLLAILP----------------T--A----DVASAAWRD------------- 296 (426)
T ss_pred ----C-CceEEEECCHHHHHHHHHHHHHHHHhCC----------------H--H----HHHHHHHHh-------------
Confidence 2 334555443 34455555544444431 0 0 112222211
Q ss_pred CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcC
Q 010735 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINC 456 (502)
Q Consensus 378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~ 456 (502)
+| .|+-++|++||++++|..-. -...|.++|+ ..+..++ .+|.|++..
T Consensus 297 ------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~~---~~~l~~i~nAGaiFlG~ 345 (426)
T PRK12447 297 ------------------------YG---EVILCDDLEEMVAEADRYAS-EHVQVMTEDP---DWFLENMTNYGALFLGE 345 (426)
T ss_pred ------------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCH---HHHHhhcCccceeccCC
Confidence 11 34567999999999998532 3556888887 4566666 589999987
Q ss_pred cCC--CCCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 457 YFA--FDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 457 ~~~--~~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
++. +..+ -|-.=...+|..|+.|.-+...|++.-++.
T Consensus 346 ~sp~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 346 RTNVAYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred CCchhhhhcccCCCcccCCCcceeecCCCcHHHhccceeEE
Confidence 654 1111 111113456778888888999999876654
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.011 Score=68.88 Aligned_cols=104 Identities=16% Similarity=0.091 Sum_probs=77.9
Q ss_pred eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (502)
Q Consensus 144 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~ 223 (502)
.+|.++|..+.....|.|+|+++.+..- ..+.+++.+|++||.+|+..++.. .. ++ +++|+.+.+.+.
T Consensus 1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~~----~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1172 LLPGPTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---RA----LV--AALPAAVQARIQ 1239 (1318)
T ss_pred cCCCCCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---HH----HH--HhccHHHHhHhh
Confidence 4667789999999999999999987443 578899999999999988654432 11 11 458988877663
Q ss_pred CCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735 224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263 (502)
Q Consensus 224 g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 263 (502)
-. ........+++.|.|.|.....+.+.++.+++.+
T Consensus 1240 ~~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809 1240 LA----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred hc----cccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence 21 1222234569999999999999999998885554
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.00 E-value=0.13 Score=52.99 Aligned_cols=110 Identities=12% Similarity=0.019 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEE---EEEeCCHHHHHHHHhc
Q 010735 347 DKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA---LMKFKTVEEAIKSANN 423 (502)
Q Consensus 347 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~---v~~~~~~~eai~~~n~ 423 (502)
+..++.+++..+.+.++++...+......+ .|.++.++...|++...++++ .|++..- ........+.+.+.++
T Consensus 80 ~~~~R~~~L~~~Adlie~~~~~lA~~E~~d-~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~~ 156 (501)
T KOG2450|consen 80 DAAERGRLLRKLADLIEQDADVLAALEVLD-NGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTRR 156 (501)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHhhhcccc-cCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEecC
Confidence 567888888888988888888887776654 788888888778887777665 4444332 2333456677788888
Q ss_pred CCCC--ceEEEec-CCHHHHHHHHhhcceeEEEEcCcCC
Q 010735 424 TRYG--LAAGIMT-KDLNVANTVSRSIRAGIIWINCYFA 459 (502)
Q Consensus 424 ~~~g--l~~~v~t-~d~~~~~~~~~~l~~g~v~iN~~~~ 459 (502)
.+.| ...+.|. .=.-.+.+++-.|.+|+++||-+..
T Consensus 157 eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae 195 (501)
T KOG2450|consen 157 EPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE 195 (501)
T ss_pred CcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence 9999 5566665 3455677888999999999998765
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.71 E-value=11 Score=39.69 Aligned_cols=110 Identities=19% Similarity=0.227 Sum_probs=72.3
Q ss_pred eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (502)
Q Consensus 144 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~ 223 (502)
.++.+.+..++....|.|-|+++.+ +....+.+++.+|++||.+++-+..... .++. .+|..+-..+.
T Consensus 628 ~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~a-------a~~~--~l~~~v~~~~~ 695 (769)
T COG4230 628 LLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGLA-------ALLK--DLPSAVASRIQ 695 (769)
T ss_pred ecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchHH-------HHHH--hchhhhhhhee
Confidence 3455678889999999999999855 5577788899999999999986654222 1111 24544322222
Q ss_pred CCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecC
Q 010735 224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (502)
Q Consensus 224 g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~g 271 (502)
-.+ .+ ...-.++.+.|.|.+...+.+.+..+ ....|++.-.+
T Consensus 696 ~~~----~~-~~~~~~~~vl~~gd~~~~r~~~~~iA-~~~Gpiv~~~~ 737 (769)
T COG4230 696 VAK----DW-TADIPFDAVLFHGDSDRLRALCEAIA-ARDGPIVSVQG 737 (769)
T ss_pred ecc----ch-hhccceeeEEecCCHHHHHHHHHHHh-cCCCCeEEeec
Confidence 111 11 22335789999999999898888766 33345554433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 502 | ||||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-144 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-138 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-138 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-138 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-138 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-138 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-137 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-137 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-137 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-136 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-136 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-135 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-135 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-108 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-108 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-107 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-107 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-107 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-106 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-100 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-99 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 4e-99 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-98 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-98 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-98 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 7e-95 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 3e-92 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 3e-92 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 2e-91 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-90 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 9e-90 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 6e-86 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 7e-86 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-85 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 9e-82 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-81 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 4e-80 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-79 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-79 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 7e-79 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 3e-73 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-71 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-70 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 7e-68 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 4e-67 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-66 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-66 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 9e-66 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 1e-65 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 2e-65 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 3e-59 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 9e-58 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-57 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-56 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 8e-54 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 5e-53 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-52 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 3e-52 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 7e-52 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 1e-50 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 9e-50 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 1e-48 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 4e-45 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 4e-45 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-44 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-44 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-43 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 9e-42 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-40 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 4e-40 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 3e-38 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-38 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 7e-38 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-37 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-37 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 2e-35 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-34 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-34 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-33 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 9e-28 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-27 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-24 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-24 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 3e-24 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-24 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 5e-15 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 6e-15 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 7e-15 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 8e-15 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 1e-13 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 3e-06 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-05 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 2e-04 |
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 502 | |||
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 0.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 0.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 0.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 0.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 0.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 0.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 0.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-171 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-170 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-169 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-169 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-169 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-168 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-168 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 1e-163 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-158 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-158 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-152 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-125 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-124 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-122 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 1e-120 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 1e-117 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 1e-98 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 9e-96 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 6e-73 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 2e-65 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 |
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 866 bits (2239), Expect = 0.0
Identities = 261/481 (54%), Positives = 347/481 (72%), Gaps = 1/481 (0%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G
Sbjct: 16 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 75
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
PW +ER ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG
Sbjct: 76 PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 135
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPA
Sbjct: 136 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
EQTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ +
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E I
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YDEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 375
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
G KGY+I+PT+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T
Sbjct: 376 GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTN 435
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495
D++ A TVS ++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V
Sbjct: 436 DIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495
Query: 496 I 496
I
Sbjct: 496 I 496
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 865 bits (2237), Expect = 0.0
Identities = 257/483 (53%), Positives = 335/483 (69%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + ADLIE LA LE LD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL GG
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+GY+I+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
Query: 494 TPI 496
+
Sbjct: 493 VKV 495
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 857 bits (2217), Expect = 0.0
Identities = 203/477 (42%), Positives = 313/477 (65%), Gaps = 6/477 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
+LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++AF++G W + +
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
+R ++ + AD++E+H E LA +EALDAG +++ A + + T RY+AG DKI
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156
Query: 142 GEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
G + +++A T +EP+GV G +IPWN+P M K + LAAG T+++KPA+
Sbjct: 157 GATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+ +M++
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE C+A+ R++V+E I++
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHN 336
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
+F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+ GG + +
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR 396
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTK 435
G++ +PT+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G+ T+
Sbjct: 397 PGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTR 456
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+V
Sbjct: 457 DINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 840 bits (2172), Expect = 0.0
Identities = 200/485 (41%), Positives = 285/485 (58%), Gaps = 6/485 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
++ ++G+ VD+ SG T + + P GE + E +DV AV AAR+AFD GPWPR
Sbjct: 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRM 82
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
SGAER +M K ADLI E LA++E+L+ GK + A+ G+I A+ Y AG A +
Sbjct: 83 SGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARAL 141
Query: 141 HGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
G+ G LREP+GVVG I PWNFP + +V A+ +GCT+++KP+E T
Sbjct: 142 EGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTS 201
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
++ A LA+ AG+PDGV NVV G+G AG +A ++D V+FTGS VG ++ + AA
Sbjct: 202 GTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA 261
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
+K V LELGGK P ++F D D++ AAD G+ N G+ C++ SR+ VQEGI D
Sbjct: 262 -RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDAL 320
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KK 378
++L++ ++ GDP + + G + + +++ SY+ G GA LL GG+ IG +
Sbjct: 321 MERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREA 380
Query: 379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
G Y PT+F VT DM IA+ EIFGPV++ + FKT +EA+ AN T +GL+A + + +L
Sbjct: 381 GLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLE 440
Query: 439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI-F 497
A R IRAG WIN + P GGYK SG GR+ G Y Q K V +
Sbjct: 441 TALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGR 500
Query: 498 NSPWL 502
+PW
Sbjct: 501 PAPWF 505
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 839 bits (2169), Expect = 0.0
Identities = 215/494 (43%), Positives = 290/494 (58%), Gaps = 11/494 (2%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-- 74
I +LFING++ V K I+P T I I KEDVD+AV AA+ A
Sbjct: 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62
Query: 75 -GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
W SGA R + A + E LA LE++D GK A DI A YY
Sbjct: 63 GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYY 121
Query: 134 AGAADKIHGEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
A A+K+ + LREPIGVVG I PWN+P M KV+PALAAGC
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
I+KP+E L L + K G+P GVLN++ G GP AGA +A+H D+DKV+FTGS+
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
G ++M AAA +KPVSLELGGKSPL++F+DVD++ AA+ A+ G + G+IC A+SR+
Sbjct: 242 TGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
+ E I EF ++V+ K + DP + R GP V + Q+++IL ++ + K EGAT+L
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 370 TGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYG 427
TGG KKG++IEPTI T+VT +M I + E+FGPV+ + F T EEAI AN+T YG
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYG 420
Query: 428 LAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 487
L A +++ DL V+++ +AGI+W+NC + P+GG K SGFGR+ G L NYL
Sbjct: 421 LGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYL 480
Query: 488 QVKSVVTPIFNSPW 501
VK V I PW
Sbjct: 481 SVKQVTQYISEEPW 494
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 839 bits (2170), Expect = 0.0
Identities = 187/493 (37%), Positives = 287/493 (58%), Gaps = 7/493 (1%)
Query: 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
++ + + +I+GE+V+S + T + I+P E I ++EG KED + A+ AAR+AF+
Sbjct: 25 MELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFE 84
Query: 74 HGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
G W + + R + AD I+EH E LA LE LD GK + D+ N Y+
Sbjct: 85 SGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYF 143
Query: 134 AGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
AG ADK GE++ + ++EP+GVV I PWN+P K++PALA GC++++
Sbjct: 144 AGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVM 203
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
KP+E TPL + L + G P G +N++ G G G ++ H ++D VSFTG + G+
Sbjct: 204 KPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK 263
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
+M+ AA +N+ ++LELGGK+P +IFDD D A D AL G F+ G++C A SR+ VQ
Sbjct: 264 HIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQ 322
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372
I D+FE+ L+++ K +G+ FD GP + + ++I SY++ K EGAT+ GG
Sbjct: 323 NSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGG 382
Query: 373 KPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
K K G + EPT+ TN M I + E+FGPV+ + F+T +EAI+ AN++ YGL
Sbjct: 383 KRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGL 442
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 488
A + +KD+ A V+ ++ G +WIN + + + P+GGYK SG GR+ G E L YL
Sbjct: 443 AGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLV 502
Query: 489 VKSVVTPIFNSPW 501
K ++T
Sbjct: 503 SKHILTNTNPQLV 515
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 826 bits (2136), Expect = 0.0
Identities = 191/486 (39%), Positives = 286/486 (58%), Gaps = 11/486 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
FI+G++V+ +G FE+I P TGE IA++ V+ A+ +A++A W S
Sbjct: 15 ASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ--KEWAAMS 72
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKI 140
R I+ + AD++ E + L+ LE LD GK + D A+ ++ G A +
Sbjct: 73 PMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSAL 132
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+G+ + + YT R P+GV I WN+P + K +PAL AG M+ KP+E TPL
Sbjct: 133 NGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
AL A + AG+P G+ NV+ G T G + +H D+ KVS TGS GR+V AAA
Sbjct: 192 GALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAAAAA- 249
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
+LK V++ELGGKSP+++FDD D+ +A A+LG ++ G++C +RV+VQ+ F
Sbjct: 250 GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFL 309
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---PIGK 377
+ L + +A ++GDP D A GP V K Q +++LSYIE GK EGATL+TGG +
Sbjct: 310 ENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAG 369
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
+G Y++PT+F +VT+DM IA+ EIFGPVM ++ F +E + AN T +GLA G+ T DL
Sbjct: 370 EGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADL 429
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV--TP 495
A+ V + AG +WIN Y + P+GG K SGFGR+ +L +Y ++K+V T
Sbjct: 430 ARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTG 489
Query: 496 IFNSPW 501
++P+
Sbjct: 490 KVDAPY 495
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 819 bits (2119), Expect = 0.0
Identities = 185/493 (37%), Positives = 290/493 (58%), Gaps = 14/493 (2%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFE-TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
+ + G + S G T E +P TG + ++ E+VD AV++A+ A+
Sbjct: 15 VVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-- 72
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W + +G ER +ML+ A +I E + +A LE ++ GK + A+ DI A + YYAG
Sbjct: 73 KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAG 131
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
A + G+ +++ YT REP+GV I+ WN+P + K +PALA G ++ KP+
Sbjct: 132 LAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPS 191
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
TP+ + A + AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM
Sbjct: 192 PMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVM 250
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+ +A +K V+LELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I
Sbjct: 251 EMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREI 309
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
+F +++V++ KA VVGDP R G + K Q D++L ++ K+EGA +L GG+P+
Sbjct: 310 MPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPL 369
Query: 376 G------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 429
K GY++ P + N +DM K EIFGPVM+++ F T EE ++ ANNT +GLA
Sbjct: 370 TPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLA 429
Query: 430 AGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489
+G+ T+D++ A+ V+ ++ AG +IN Y + P+GGYKMSGFGR+ G ++ Y Q+
Sbjct: 430 SGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQL 489
Query: 490 KSVVTPI--FNSP 500
K+V+ + +S
Sbjct: 490 KTVIVEMGDVDSL 502
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 811 bits (2098), Expect = 0.0
Identities = 198/488 (40%), Positives = 288/488 (59%), Gaps = 14/488 (2%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
+ + FI GEFV S SG+TF ++DP T E + A G + +VD A KAA +AF W
Sbjct: 23 KERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RW 80
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
R ER+ +L+ A+LIE+HA+ LAV+E LDAG++ + + AA +YA A
Sbjct: 81 SRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYA 139
Query: 138 DK-IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ + + R YT+R P G VG I PWN P + +++PALA G T+++KPAE
Sbjct: 140 EHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAE 199
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+P A A + K A +P GV N+V GFG AGAA+ +H + ++ TG T+ G+ VM+
Sbjct: 200 WSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMR 259
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA +LK +S ELGGKSP L+F D D+ A D + I GE C ASSR+ V+E I+
Sbjct: 260 NAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIF 318
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
++F K+VE+A+A VG P DP GP + + R+L Y+E GKREGA LL GG+
Sbjct: 319 EDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAK 378
Query: 377 --------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
+G Y+ PT+F M IA+ EIFGPV+ + FK EEA++ AN+T+YGL
Sbjct: 379 TSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGL 437
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 488
AA + T+DL A+ ++ + AG++++N + P+GG K SG R+ G +L Y
Sbjct: 438 AAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTD 497
Query: 489 VKSVVTPI 496
+K++ P+
Sbjct: 498 LKTIALPL 505
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 798 bits (2064), Expect = 0.0
Identities = 177/483 (36%), Positives = 263/483 (54%), Gaps = 7/483 (1%)
Query: 12 SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA 71
SL+K + KL INGE V G+ +P TG+ + IAE E VD AV+AA A
Sbjct: 14 SLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAA 72
Query: 72 FDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131
F W + + R +LK AD+IEE+ +V A LE+ + GK A +IP + R
Sbjct: 73 F--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFR 130
Query: 132 YYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
++AGAA ++G R+P+GVV I PWN+P M K++PALAAG +
Sbjct: 131 FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCV 190
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
++KP+E TPL AL A LAK P GV+N++ G G T G + H + VS TGS
Sbjct: 191 VLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT 249
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
G ++ A S++K +ELGGK+P+++FDD D+ + +N G+ C A+ R+Y
Sbjct: 250 GEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIY 308
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLL 369
Q+GIYD +KL G P D + GP +R+ +E K G ++
Sbjct: 309 AQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVI 368
Query: 370 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 429
TGG+ GYY PT+ +D I + E+FGPV+++ F E+ + AN+++YGLA
Sbjct: 369 TGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLA 428
Query: 430 AGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489
+ + TKD+ A+ VS ++ G W+N +F S+ P+GG K+SG+G+D L L +Y V
Sbjct: 429 SSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVV 488
Query: 490 KSV 492
+ V
Sbjct: 489 RHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 784 bits (2028), Expect = 0.0
Identities = 160/480 (33%), Positives = 260/480 (54%), Gaps = 7/480 (1%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ T+L I F + ++PRTG I +AE +D AV AA +AF
Sbjct: 19 YFQSMMDTQLLIGSRFEAG-TEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV- 76
Query: 75 GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
W + + AER +LK AD IE+ A+ A LEAL+ GK + K ++P + R++A
Sbjct: 77 -GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFA 135
Query: 135 GAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
GA +H R+PIG+VG I PWN+P M K++PA+ G T++ K
Sbjct: 136 GAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFK 195
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P+EQTPL AL A L +P+GV+NV+ G G T G A+ +H + VS TG G++
Sbjct: 196 PSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKK 254
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
V+ AAA +K LELGGK+P++++ D D+ + +N G+ C A+ R+Y +
Sbjct: 255 VLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEA 313
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGG 372
GIY++ L D GP + ++Q DR+ S++E + + TGG
Sbjct: 314 GIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGG 373
Query: 373 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 432
+ +G++ +PT+ T++ I + E+FGPV+++ +F ++A+ AN++ YGLA+ +
Sbjct: 374 RTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSV 433
Query: 433 MTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
TKD++ A + ++ G WIN +F ++ P+GG K SG+G+D + +L +Y V+ +
Sbjct: 434 WTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 752 bits (1944), Expect = 0.0
Identities = 192/487 (39%), Positives = 275/487 (56%), Gaps = 5/487 (1%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
++ KLFI G++ + E P TGE + ++ DVD AV AAR AFD+GP
Sbjct: 4 SATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGP 63
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
WP ER ++ ++ E ++ L A + G+ + + G+ + Y+AGA
Sbjct: 64 WPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGA 123
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADK+ + Q REP+GVVG I+ WN P + K++PAL AGCT+++KPA
Sbjct: 124 ADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+TPL A A + G+P+GVL+VVPG G G A+ S+ DID +FTGS+ VGR+V +
Sbjct: 184 ETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGR 242
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA LKP +LELGGKS +I +DVD+ A M + + N G+ CV +R+ Y
Sbjct: 243 RAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
DE + A VG P DPA + GP + +KQ R+ YI G EGA L+ GG
Sbjct: 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPE 361
Query: 377 --KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434
G++I+PT+F +V M IA+ EIFGPV+A++ + T E+AI AN++ YGLA + T
Sbjct: 362 GLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWT 421
Query: 435 KDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
D+ +S+ IR G IN Y AFD P+GGYK SG GR+ G E + ++ Q KSV+
Sbjct: 422 TDVPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480
Query: 495 PIFNSPW 501
P+ +
Sbjct: 481 PMGYTVA 487
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 722 bits (1865), Expect = 0.0
Identities = 187/480 (38%), Positives = 269/480 (56%), Gaps = 11/480 (2%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
+TK +INGE+V+S S +T E I+P T E I ++A+G+K DVD AV+AA +
Sbjct: 3 AMRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE-- 60
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
+ S ER+ ++ K E + + + G S ++ N A
Sbjct: 61 FRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDA 120
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
D E R ++E IGV G I PWNFPT +K++ A AAG +++KP+E
Sbjct: 121 LDNYEFE----ERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSE 176
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+TP A+ A + GVP GV N+V G G G ++ H + +SFTGS G ++M+
Sbjct: 177 ETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA + K VSLELGGKSP ++ DDVD+ AA ++ N G++C A +RV V I
Sbjct: 237 KAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIK 295
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KP 374
D F +L E+ VG+P + + GP + KKQFD++ +YI G EGA L GG KP
Sbjct: 296 DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP 355
Query: 375 IG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
G +KGY+ PTIF NV M IA+ EIFGPVM+++ + ++EAI+ AN+T+YGLA ++
Sbjct: 356 EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVI 415
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
KD + V+RSI AG + IN D P+GGYK SG GR+ G + +L+VKS+
Sbjct: 416 GKDKETLHKVARSIEAGTVEINEA-GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 718 bits (1857), Expect = 0.0
Identities = 167/477 (35%), Positives = 262/477 (54%), Gaps = 8/477 (1%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
+ K +ING + D + IDP T EA A I+ G D D A+ AA++AF W
Sbjct: 23 LNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWK 80
Query: 79 RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
S ER G + K ++ E+ + +A +++ G A ++ +R + A
Sbjct: 81 TTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYK 140
Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
+ + + Q + IGVVG I PWN+P +KV PAL AGCTM++KP+E
Sbjct: 141 EFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIA 200
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL A+ FA + A +P GV N++ G G G+ +++H D++ +SFTGST G+ + + A
Sbjct: 201 PLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNA 260
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
+ + LK V LELGGK +IF D D++ A + +N G+ C A +R+ V++ IYD+
Sbjct: 261 S-NTLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDK 318
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG 376
K + A+ VG GP V K+Q+D+I I+ G EGATL+TGG P+G
Sbjct: 319 AIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMG 378
Query: 377 -KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
++GYY+ PT+F +V M I + EIFGPV++L+ F T +EA+ AN+T YGL I ++
Sbjct: 379 MERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQ 438
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
D + ++ +R+G++ +N + +GG K SG R+ GL + +L K++
Sbjct: 439 DRSKCRRIAAQVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 704 bits (1820), Expect = 0.0
Identities = 157/489 (32%), Positives = 254/489 (51%), Gaps = 16/489 (3%)
Query: 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAF 72
+ K L INGE V + ++ +P R + + +++ +++ + A+++A +AF
Sbjct: 30 VEKELGKEYPLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAF 87
Query: 73 DHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132
W + ER I++K A +I + +AGK A D A + L Y
Sbjct: 88 Q--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEY 144
Query: 133 YAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
YA +++ +SR Q P+GV I PWNF + + G T++
Sbjct: 145 YARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVV 204
Query: 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251
+KPA TP++A F + + AG+P GV+N VPG G G + H ++FTGS DVG
Sbjct: 205 LKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVG 264
Query: 252 RQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
++ + AA ++LK V +E+GGK +++ D D++ AA+ L+ G+ C A
Sbjct: 265 VRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAG 324
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
SR + + +YDE +K V AK VGDP + GP +D+K F++I+SYIE GK+EG
Sbjct: 325 SRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG- 383
Query: 367 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY 426
L+TGG+ G++I+PTI ++ + +I + EIFGPV+A K + A++ ANNT Y
Sbjct: 384 RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEY 443
Query: 427 GLAAGIMTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESL 483
GL ++T++ R G ++ N C A P+GG+KMSG + G + L
Sbjct: 444 GLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYL 503
Query: 484 HNYLQVKSV 492
++Q K+V
Sbjct: 504 ALHMQAKTV 512
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 652 bits (1684), Expect = 0.0
Identities = 148/484 (30%), Positives = 250/484 (51%), Gaps = 18/484 (3%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
+ L+I GE+VD+ + +++P E + A+ K + + A++AA +AF W
Sbjct: 36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWK 91
Query: 79 RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
+ +R ++LK A L+ L + GK A D+ A + + YYA AA
Sbjct: 92 DWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAAL 150
Query: 139 KIHGEVLKMSRA--LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ +++ + P+G I PWNFP +F + +A G T+I KPAE
Sbjct: 151 RYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAE 210
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
++ + AG P GV+N +PG G GA + H I ++FTGS +VG ++ +
Sbjct: 211 DAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270
Query: 257 AAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
AA + K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR+ +
Sbjct: 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLIL 330
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
+G Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG L+ G
Sbjct: 331 TQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLG 388
Query: 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 431
GK + +GY+I PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL G
Sbjct: 389 GKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGG 448
Query: 432 IMTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQ 488
+ ++ R G ++ N A P+GG+K+SG G L+ L +L+
Sbjct: 449 VYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508
Query: 489 VKSV 492
+K+V
Sbjct: 509 MKAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 644 bits (1664), Expect = 0.0
Identities = 161/482 (33%), Positives = 249/482 (51%), Gaps = 10/482 (2%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
I TK I G++V+ S + I+P IA + DVD A +AA++A
Sbjct: 6 TFAGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ-- 63
Query: 75 GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
W AER I+ + A+L+EEH E + ++G S A +I A N + A
Sbjct: 64 AEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESA 122
Query: 135 GAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
++HG + + + R GVVG I PWNFP + V+PALA G +++K
Sbjct: 123 SFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIK 182
Query: 194 PAEQTPLIALY-FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
PA TP+ A + + AGVP GV++ V G G G +H +SFTGST VGR
Sbjct: 183 PASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGR 242
Query: 253 QVMQAAATS-NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
+V + A +K V+LELGG +P ++ D D++ AA A +G ++G+IC++ +RV V
Sbjct: 243 RVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIV 302
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
++DEF +K VE K GDP GP ++ Q + IE K+EGAT+
Sbjct: 303 DAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVE 362
Query: 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 431
G +G + P +F++VT DM IA+ EIFGP+++++K A + AN + +GL+A
Sbjct: 363 GPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAA 419
Query: 432 IMTKDLNVANTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVK 490
+ +KD++ A + I +G++ IN D +GG K SG GR G ++ + +
Sbjct: 420 VWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDR 479
Query: 491 SV 492
+
Sbjct: 480 WI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 598 bits (1543), Expect = 0.0
Identities = 134/486 (27%), Positives = 226/486 (46%), Gaps = 19/486 (3%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
+ ++ GE+ S G+ E P IA++ +E+V+ + +
Sbjct: 14 GGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-S 70
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
G ER ++ K AD+IE + +V A + ++AGK S A G++ A + LR
Sbjct: 71 ARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELD 129
Query: 137 ADKIHGEVLKMSRALQG-----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
KI G+ + REP+GVV I P+N+P K++ + G ++
Sbjct: 130 LKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVV 189
Query: 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251
VKP+ PL A AG P + ++ G I + + VSFTGST+VG
Sbjct: 190 VKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFTGSTEVG 248
Query: 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
+V++ +K +ELGG P ++ +D D++ AAD GI G+ C A V
Sbjct: 249 ERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA 305
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
+ +Y + +++ ++ + VGDP DP V GP + D +++ IE +G +L G
Sbjct: 306 ERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 365
Query: 372 GKPIGKKGYYIEPTIF---TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
G+ +G Y++PT + +DM++ K E+F PV ++ K +++AI+ AN YGL
Sbjct: 366 GRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGL 423
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYL 487
A + +D+ R + G I+IN P+GG K SG R+ ++
Sbjct: 424 DAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVT 483
Query: 488 QVKSVV 493
K++V
Sbjct: 484 AYKTIV 489
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 594 bits (1534), Expect = 0.0
Identities = 155/484 (32%), Positives = 238/484 (49%), Gaps = 17/484 (3%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
E + NGE+V+S +G+ P +G A+ I +E+V+ A++ A+ A
Sbjct: 7 TEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI-- 64
Query: 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
W ER ++ +ADL+EE E++ L + K A G++ A+ +R+ A
Sbjct: 65 WKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADE 123
Query: 137 ADKIHGEVLKMSRALQG------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
A +++GE LK + G REP+GVV I P+N+P + K++PAL G T+
Sbjct: 124 ALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
+ KPA Q L + AG P+G++ VV G G G + H ID ++FTG T
Sbjct: 184 VFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTT 243
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
G ++ + A + PV LELGGK P ++ DD D+ A + G G+ C A RV+
Sbjct: 244 GERISEKA---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVF 300
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370
VQ+ + D+ + E + VG P D P +D+K I I+ GATLL+
Sbjct: 301 VQDSVADQLVANIKELVEQLTVGSPEDD-ADITPVIDEKSAAFIQGLIDDALENGATLLS 359
Query: 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 430
G K +G + PT+ +VT M +A E FGPV+ +++ K EAI +N + YGL A
Sbjct: 360 GNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQA 416
Query: 431 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQV 489
I TKD + A + + + G + IN D P+ G K SG G SL + +
Sbjct: 417 SIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRE 476
Query: 490 KSVV 493
+ V
Sbjct: 477 RVTV 480
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 593 bits (1532), Expect = 0.0
Identities = 133/488 (27%), Positives = 214/488 (43%), Gaps = 15/488 (3%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
+ +I G+++ G+T E++DP + D VD AV AAR+AF W R
Sbjct: 6 STHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRP 62
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
+R ++ +FA ++ A+ LA + + GK + ++ N + A +
Sbjct: 63 LEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERT 121
Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
GE +P GVV P+NFP + + PAL AG ++ KP+E TP +
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
A AG+P GVLN+V G G G A+A+H +D + FTGS+ G +
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFE 320
K ++LE+GG +PL++ + D++ A + + G+ C + R+ V +G + D
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300
Query: 321 KKLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379
+LV + VG PA G + + +L EH +GA L
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGA 360
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
+ P I +V+ E FGP++ ++++ AI+ AN T+YGLAAG+++
Sbjct: 361 ALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRER 419
Query: 440 ANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNY------LQVKSV 492
RAGI+ N S P+GG SG R + L+ SV
Sbjct: 420 FEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVASLESPSV 479
Query: 493 VTPIFNSP 500
P +P
Sbjct: 480 SLPATLTP 487
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 591 bits (1526), Expect = 0.0
Identities = 101/521 (19%), Positives = 187/521 (35%), Gaps = 53/521 (10%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M E+ K + G+++ +G DP TG A+ R++ + A
Sbjct: 4 MTEL--LKNHVAGQWIAG-TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--A 58
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
+ A+R + L++ + ++G + + DI G TL YYA
Sbjct: 59 ALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAK 117
Query: 136 AADKIHGEVLKMSRALQG----------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
+ + + + L GV I +NFP+ + K +PAL
Sbjct: 118 LGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALL 177
Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
+G +IVKPA T + AG+ P G L+++ G ++ + D VSF
Sbjct: 178 SGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSF 234
Query: 245 TGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNT-----AADMALLGILFN 298
TGS D + A ++++ + ++ D +T + +
Sbjct: 235 TGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVK 294
Query: 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI 358
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +L+ I
Sbjct: 295 SGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGI 354
Query: 359 EHGKREGATLLTGGK-----PIGKKGYYIEPTIF--TNVTEDMLIAKNEIFGPVMALMKF 411
+ E + P +F + L+ E+FGPV ++ +
Sbjct: 355 AALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPY 414
Query: 412 KTV--------EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD 463
+ A+ A + L A I + D ++ + ++
Sbjct: 415 RVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQH 474
Query: 464 -----------CPYGGYKMSGFGRDC-GLESLHNYLQVKSV 492
+GG +G G + GL +L Y + ++
Sbjct: 475 SQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 583 bits (1506), Expect = 0.0
Identities = 143/475 (30%), Positives = 240/475 (50%), Gaps = 20/475 (4%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+FI+G++++ + + I+P + E I +I +E+ A+ A + +
Sbjct: 2 MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPIT 56
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
+R I++ A I+E E LA + A+DAGK A+ ++ + T + A + E
Sbjct: 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDE 115
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
V+ L +T REP+G+VG I P+NFP + K++PA+A G ++ P+ + PL+ +
Sbjct: 116 VIPSDDRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174
Query: 204 YFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
A + + A VP GV N++ G G G I + ++ +SFTGS+ VG + + A
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
K ++LELGG +P ++ D D+N A + + G G++C++ + V E I D+F
Sbjct: 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 379
+ V KAK VG+P D GP + + + + +E EG LL GGK
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DK 348
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
PTI V D ++ K E F PV+ +++ EE I AN+T YGL + I T D+N
Sbjct: 349 ALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINK 406
Query: 440 ANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+ + ++ G + IN F D P+GG K SG GR+ ++ +K+++
Sbjct: 407 SLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 539 bits (1390), Expect = 0.0
Identities = 150/481 (31%), Positives = 230/481 (47%), Gaps = 19/481 (3%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRA 58
Query: 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD++ E + + + + K + A ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLKMSRAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ LELGGK ++ +D D+ A + G G+ C A RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
+ DE +K+ EK A +G+P D P +D K D + I +GAT LT K
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+G I P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I
Sbjct: 354 R---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T D A ++ + G + IN +D P+ G K SG G S+ VKSV
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470
Query: 493 V 493
V
Sbjct: 471 V 471
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 532 bits (1373), Expect = 0.0
Identities = 161/479 (33%), Positives = 252/479 (52%), Gaps = 6/479 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M ++I+G+FV + ++P T I+RI +G ED A+ AA +A
Sbjct: 1 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP-- 58
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W ER + K + I E A ++ L + GK+ A+ ++ A+ + Y A
Sbjct: 59 EWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAE 117
Query: 136 AADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
A + GE+++ R + +GV I+PWNFP + K++PAL G T+++KP
Sbjct: 118 WARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKP 177
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
+E TP A+ FA + G+P GV N+V G G T G +A + + VS TGS G ++
Sbjct: 178 SEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKI 237
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
M AA N+ V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+G
Sbjct: 238 MATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 315 IYDEFEKKLVEKAKAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
IYD+F +L E +A G+P + + GP ++ +R+ + EGA + GGK
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK 356
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+ KGYY PT+ +V ++M I E FGPV+ ++ F T+E+AI AN++ YGL + I
Sbjct: 357 AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIY 416
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T++LNVA + ++ G +IN + G++ SG G G LH YLQ + V
Sbjct: 417 TQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 517 bits (1333), Expect = 0.0
Identities = 133/481 (27%), Positives = 231/481 (48%), Gaps = 11/481 (2%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M K FING++ SG+T + ++P I + + ++ A A++A
Sbjct: 1 MSFETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK-- 58
Query: 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W + + +R+ ++ K + E+ + + ++ A + G + ++ L
Sbjct: 59 EWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMT 117
Query: 136 AADKIHG-EVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
++ G + + R P+GV+ I P+NFP + ++PA+A G +++ K
Sbjct: 118 YTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHK 177
Query: 194 PAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
P QT + A + AG+P GVLNV+ G + ++ +SFTGST VGR
Sbjct: 178 PDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGR 237
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
+ + A K ++LELGG +P + D DV+ A D A+ G ++G+IC+ +R+ V
Sbjct: 238 HIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVH 296
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 372
+ +YDEF +K + K GD DP GP ++++Q ++ L IE K +G L G
Sbjct: 297 QDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEG 356
Query: 373 KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 432
K G + P +F + IA+ E+F P+ ++K + +EAI AN+T YGL++ +
Sbjct: 357 KR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAV 413
Query: 433 MTKDLNVANTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKS 491
T DL + I +G+ +N DS + +GG K SG GR + + K
Sbjct: 414 FTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKW 473
Query: 492 V 492
+
Sbjct: 474 I 474
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 492 bits (1268), Expect = e-171
Identities = 161/497 (32%), Positives = 258/497 (51%), Gaps = 18/497 (3%)
Query: 1 MEGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKED 60
M ++ + FI G++V S T + + P TG+ I I G K D
Sbjct: 1 MSLTVQD---LHFKN------KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKAD 51
Query: 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
+ A++ A+ A W + + R+ ++ FA+ I E+ +LA + + GKL S A+
Sbjct: 52 AENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE- 108
Query: 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
++ A + Y A I G++L + Y + P GVV I WNFP + K
Sbjct: 109 MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRK 168
Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
+ PAL G TM++KP ++TPL +AK AG+PDGVLNV+ G G G +
Sbjct: 169 IGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPIT 228
Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
++ TGST G+Q+ + +A + PV LELGGK+P+++ DD D++ AA+ AL G N
Sbjct: 229 KMITMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANC 287
Query: 300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE 359
G++C R+YV +YDEF K + K VGDP D + GP+ ++++ D I +
Sbjct: 288 GQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVH 347
Query: 360 HGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415
++GAT+ TGGK + G + EPT+ +V +D ++ E FGP++ ++K ++E
Sbjct: 348 EAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSME 407
Query: 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG 475
+AI+ N++ YGL+A + T+ N + G ++IN + G+K SGFG
Sbjct: 408 QAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFG 467
Query: 476 RDCGLESLHNYLQVKSV 492
+ G L YL+ K+V
Sbjct: 468 GEDGKFGLEQYLEKKTV 484
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 488 bits (1258), Expect = e-170
Identities = 140/501 (27%), Positives = 232/501 (46%), Gaps = 16/501 (3%)
Query: 1 MEGSLSNGSCKSLFKMPEI-KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKE 59
M L N + K + + + NG + G+ T P E IAR+ +
Sbjct: 2 MSTLLINQPQYAWLKELGLREENEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVA 59
Query: 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
D + VK AR+A+ W +R I+ + D + E +VL L +L+ GK+
Sbjct: 60 DYEETVKKAREAWKI--WADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV 117
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFM 178
G++ + Y G + I G +L R+ P+G+VG I +NFP ++
Sbjct: 118 -GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176
Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIA 234
+ A+ G + K A T LI++ + + +P + ++ G G G A+A
Sbjct: 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMA 235
Query: 235 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 294
++ +SFTGST VG+QV LELGG + ++ F+D D++ AL
Sbjct: 236 KDERVNLLSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFA 294
Query: 295 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354
+ G+ C + R+++ E I+DE +L + VG+P+DP V GP K+
Sbjct: 295 AVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMF 354
Query: 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414
L +E K+EG T++ GGK + + G Y+EPTI T + D IA E F P++ + KF+
Sbjct: 355 LGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414
Query: 415 EEAIKSANNTRYGLAAGIMTKDLNVANTV--SRSIRAGIIWINCYFA-FDSDCPYGGYKM 471
EE N + GL++ I TKDL + GI+ +N + + +GG K
Sbjct: 415 EEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKH 474
Query: 472 SGFGRDCGLESLHNYLQVKSV 492
+G GR+ G ++ Y++ +
Sbjct: 475 TGGGRESGSDAWKQYMRRSTC 495
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 486 bits (1253), Expect = e-169
Identities = 173/487 (35%), Positives = 272/487 (55%), Gaps = 11/487 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
SL + + +I GE+ + S TFE DP TGE++ + + + A++AA+
Sbjct: 8 PSLLR------HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQA 61
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
A+ W + ER I+ ++ DL+ +++ LA++ + GK + AK G+I AA+ +
Sbjct: 62 AWA--GWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFI 118
Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
++A ++ G+ L A + ++EPIGV I PWNFP M KV PALAAGC
Sbjct: 119 EWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCP 178
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
++VKPAE TP AL A LA+ AGVP GVL+VV G G I S+ + K+SFTGST
Sbjct: 179 IVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA 238
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
VGR +M +A +K ++LELGG +P ++FDD D++ A + A+ N G+ CV ++R
Sbjct: 239 VGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRF 297
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
+V E +YD F KL VG + GP +++ ++ S+I +GA+L+
Sbjct: 298 FVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLM 357
Query: 370 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 429
TGGK + EPT+ T V DM +AK E FGP+ L +F + EE ++ AN+T +GLA
Sbjct: 358 TGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLA 417
Query: 430 AGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489
A + ++D+ V+ ++ G++ IN + P+GG K SG GR+ + +Y+ +
Sbjct: 418 AYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVI 477
Query: 490 KSVVTPI 496
K + +
Sbjct: 478 KYLCVAV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 485 bits (1252), Expect = e-169
Identities = 176/485 (36%), Positives = 277/485 (57%), Gaps = 11/485 (2%)
Query: 9 SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA 68
+ +LF+ + INGE++D+ +G+ + +P G+ + + + ++ A+ AA
Sbjct: 3 NDSNLFR------QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAA 56
Query: 69 RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN 128
+A W + ER I+ + +L+ EH + LA L L+ GK + AK G+I AA+
Sbjct: 57 NRALPA--WRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAAS 113
Query: 129 TLRYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
+ ++A +I+G+ + +A + +++PIGV I PWNFP M K PALAAG
Sbjct: 114 FIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAG 173
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
CTM++KPA QTP AL A LA AGVP GV NVV G G + S+ + K+SFTGS
Sbjct: 174 CTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGS 233
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASS 307
T++GRQ+M+ A ++K VSLELGG +P ++FDD D++ A + AL N G+ CV ++
Sbjct: 234 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCAN 292
Query: 308 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367
R+YVQ+G+YD F +KL + +GD D V GP +D+K ++ +I +GA
Sbjct: 293 RLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGAR 352
Query: 368 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYG 427
++ GGK + G + +PTI +V + ++K E FGP+ L +FK + I AN+T +G
Sbjct: 353 VVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFG 412
Query: 428 LAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 487
LAA +DL+ V ++ GI+ IN + P+GG K SG GR+ + +YL
Sbjct: 413 LAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYL 472
Query: 488 QVKSV 492
++K +
Sbjct: 473 EIKYM 477
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 503 bits (1296), Expect = e-169
Identities = 153/479 (31%), Positives = 237/479 (49%), Gaps = 18/479 (3%)
Query: 25 FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
FING+ V + T++P + E + +I + +V A+ AA+ AF W
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPR 590
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHG 142
R +LK A + L+ + L+ GK W + D+ A + L YYA ++
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGK--QWDQAYADVTEAIDFLEYYAREMIRLGQ 648
Query: 143 EVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
+ + EP GV I PWNFP + S A+ G ++ KP+ T +I
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT- 260
+ L + AG+P+GV N PG G G + H DI ++FTGS + G ++++ AA
Sbjct: 709 GWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768
Query: 261 ----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
+N+K + E+GGK+ ++I DD D++ A L +G+ C A SRV V + +Y
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376
D+F ++LV AKA VG DPA G D K I Y E GKREG L P
Sbjct: 829 DKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVP-A 887
Query: 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+GY++ TI + + IA+ EIFGPV+A+M+ K ++AI+ AN+T++ L GI ++
Sbjct: 888 GEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRS 947
Query: 437 LNVANTVSRSIRAGIIWINCYF--AFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 492
R R G ++IN A P+GG +MSG G + G + L +++ + V
Sbjct: 948 PEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVV 1006
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 483 bits (1246), Expect = e-168
Identities = 183/483 (37%), Positives = 281/483 (58%), Gaps = 13/483 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
SL K ++ +NG ++D+ G T + +P G I + + A+ A+ +
Sbjct: 28 PSLLK------SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAK 81
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
A W + ER GI+ K+ DLI +A+ +A++ + GK + A+ G++ AA+ +
Sbjct: 82 ALSG--WAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFI 138
Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
++A A +++G+ + + + +R+P+GV I PWNFP M K +PALAAGCT
Sbjct: 139 EWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCT 198
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
MIV+PA+ TPL AL LA+ AG+P GVL +V G GA + S+ + K+SFTGST+
Sbjct: 199 MIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTE 258
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
VGR +M A +K +SLELGG +P ++FDD D++ A D A++ N G+ CV ++R+
Sbjct: 259 VGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRI 317
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
YVQ G+YD+F +KL K K VG+ +P V GP +++K ++ ++IE +GA L+
Sbjct: 318 YVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLI 377
Query: 370 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 429
TGGK +G G + EP I T VT DML+AK E FGP+ L F T EE I AN+T +GLA
Sbjct: 378 TGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLA 435
Query: 430 AGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489
A T++ + A VS ++ G++ N + P+GG K SG GR+ + YL+
Sbjct: 436 AYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLET 495
Query: 490 KSV 492
K +
Sbjct: 496 KYI 498
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 483 bits (1245), Expect = e-168
Identities = 155/484 (32%), Positives = 251/484 (51%), Gaps = 12/484 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
L +I G + DS G TF+ +P TG IA++ +EDV AV+A +
Sbjct: 7 PLLEN------LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQS 60
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
A + RR + D ++E+ E + + ++ GK A+ G++ AA
Sbjct: 61 ALR--LTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFF 117
Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
Y A + + P+GV G I+PWNFP M K+S ALAAGC
Sbjct: 118 DYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCP 177
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
++KPA +TPL + F + +PDG++N+V G G + H D+ +SFTGST+
Sbjct: 178 SVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTE 237
Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
VGR+++ A +K ++LELGG +P ++FDD D+ AAD + G+ CV ++R+
Sbjct: 238 VGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRI 296
Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 369
+V E + D F +KL E+ VGD + + GP ++K+ FD++ +++ +GA+L+
Sbjct: 297 FVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLV 356
Query: 370 TGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
G +P G + PT+ V +M + E FGP++ + F+T EE I + N+T +GL
Sbjct: 357 AGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGL 416
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 488
A+ + T D A V+ +R G + N + P+GG K SG GR+ GLE L +++
Sbjct: 417 ASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVE 476
Query: 489 VKSV 492
++V
Sbjct: 477 AQTV 480
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 470 bits (1211), Expect = e-163
Identities = 172/487 (35%), Positives = 266/487 (54%), Gaps = 17/487 (3%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
+L + T F+ G ++ + TF DP +G A+ +A+ + AV+AA +
Sbjct: 8 AALLR------TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYE 59
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
AF W S ER ++ K+ +L+ ++ + LA + ++GK A G+I +A L
Sbjct: 60 AFCR--WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFL 116
Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
+++ A +++G+++ + L++PIGV I PWNFP+ M KV ALAAGCT
Sbjct: 117 EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCT 176
Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTG 246
++VKPAE TP AL A LA AG+P GV NV+P A G AI + + K+SFTG
Sbjct: 177 VVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTG 236
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST G+ ++ AA +++K VS+ELGG +P ++FD +V+ A A+ N G+ CV S
Sbjct: 237 STTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCS 295
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAW-VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
++ VQ GI+D F K E K VG+ F+ QGP +++K +++ + +G
Sbjct: 296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKG 355
Query: 366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425
AT++TGGK + EPT+ NVT+DML E FGP+ ++KF T EEAI AN
Sbjct: 356 ATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAAD 415
Query: 426 YGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 485
GLA ++D V+ + G++ +N +CP+GG K SG GR+ +
Sbjct: 416 VGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDE 475
Query: 486 YLQVKSV 492
YL++K V
Sbjct: 476 YLELKYV 482
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 457 bits (1178), Expect = e-158
Identities = 135/459 (29%), Positives = 208/459 (45%), Gaps = 5/459 (1%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFAD 94
+ +++P TG+ +A + + ++++ A+ A F W S A+R +
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDIGQ 62
Query: 95 LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGY 154
+ HAE +A + GK A+ ++ +A +YA + + Q
Sbjct: 63 ALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAV 121
Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
P+GV+ I+PWNFP P L AG + ++K A A A + AG
Sbjct: 122 IEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGT 181
Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
P GV V I I V+ TGS G + A + LK LELGG
Sbjct: 182 PAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSD 239
Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
P ++ +D D+ A A+ G N G++C A+ R V+EGI F + V A A +GD
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299
Query: 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394
P GP D + ++ EGA LL GG+ I +G Y T+ +VT DM
Sbjct: 300 PLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDM 359
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
+ E+FGPV A+ K A+ AN++ +GL+A I T D +A ++ + G ++I
Sbjct: 360 TAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFI 419
Query: 455 NCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
N Y A D+ +GG K SGFGR+ LH + V++V
Sbjct: 420 NGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 457 bits (1178), Expect = e-158
Identities = 124/457 (27%), Positives = 207/457 (45%), Gaps = 5/457 (1%)
Query: 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97
+++++P T EA A + +D A+ A + W A R I+ A+ ++
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62
Query: 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR 157
EH + LA + L+ GKL S +K ++ + YYA ++ S Y L+
Sbjct: 63 EHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121
Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
+ GV+ PWNFP +P G +++K A P A A + K AG P+G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
L + IA I V+ TGS G V +AA NLK ++ELGG +
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239
Query: 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337
+ DD D ++ +N G++C +S R+ V++ YDE +L GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIA 397
P +K +++ + ++ GA + I KG + PTI T++ +D +
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359
Query: 398 KNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY 457
E+FGP+ + + AI+ AN++ YGL + ++ D++ A VS I G+ IN
Sbjct: 360 DKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGR 419
Query: 458 FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
+ + P+GG K SG+GR+ L ++ V+
Sbjct: 420 WITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 442 bits (1139), Expect = e-152
Identities = 94/495 (18%), Positives = 170/495 (34%), Gaps = 49/495 (9%)
Query: 31 VDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
++ + F + TGEA+ + +V+ A AA + + R + ++R ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLL 58
Query: 90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
A +E ++ + L+ G+I AN LR +A + +
Sbjct: 59 RTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDT 117
Query: 150 ALQG---------YTLREPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKPAEQT 198
+ +G V NFP + + ALAAGC +IVK
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177
Query: 199 PLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
P + A + A +P + ++ G G A+ SH +I V FTGS GR +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237
Query: 255 MQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNTA--ADMALLGILFNKGEICVASSRVYV 311
A P ELG +P IF A AD + + G+ C V+
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297
Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371
+ +E A++ + P+ P + + + G +G +
Sbjct: 298 LNTPETQ---AFIETAQS--LIRQQSPSTLLTPGIRDSYQSQ---VVSRGSDDGIDVTFS 349
Query: 372 GKPIGKKGYYIEPTIFTNVTEDML---IAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
+ +F +E+ + EIFGP ++ + V + + + L
Sbjct: 350 QAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSL 405
Query: 429 AAGIMT--KDLNVANTVSRSI--RAGIIWINCYFAFDSDC-------PYGGYKMSGFGRD 477
A I +D + + + AG + N + PY S
Sbjct: 406 TATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STS 464
Query: 478 CGLESLHNYLQVKSV 492
G E++H +L+ +
Sbjct: 465 VGAEAIHRWLRPVAY 479
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 374 bits (961), Expect = e-125
Identities = 100/487 (20%), Positives = 161/487 (33%), Gaps = 52/487 (10%)
Query: 22 TKLFINGEFVDSV-SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
K + GE++D + + P A+ G E V+ A +AA +AF +
Sbjct: 30 GKHLVAGEWLDGAGTFASAPAHGPAHDFAV-----GTVELVNRACEAAEEAFW--TYGYS 82
Query: 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA--- 137
S ER + AD IE AE + + + + G + G+ LR +A
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKG 141
Query: 138 ---DKIHGEVLKMSRALQG---YTLREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCT 189
D+ + + ++ P+G V NFP + ALAAGC
Sbjct: 142 DYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCP 201
Query: 190 MIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
++VK P A + GV GV +++ G G A+ H I V FT
Sbjct: 202 VVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261
Query: 246 GSTDVGRQVM-QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA---LLGILFNKGE 301
GS GR + AA P ELG +P+ + + A + + G+
Sbjct: 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQ 321
Query: 302 ICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH 360
C V EG D F VE + + + + +F
Sbjct: 322 FCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF--------- 372
Query: 361 GKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKN---EIFGPVMALMKFKTVEEA 417
R L + G P +F L E+FGP+ +++ + E
Sbjct: 373 ATRNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEM 429
Query: 418 IKSANNTRYGLAAGIMTKDLNVAN----TVSRSIRAGIIWINCYFAFDSDCPY----GGY 469
+ A + L A I ++ +AG + +N + G Y
Sbjct: 430 EELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPY 489
Query: 470 KMSGFGR 476
S
Sbjct: 490 PASTNFG 496
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 370 bits (951), Expect = e-124
Identities = 84/469 (17%), Positives = 158/469 (33%), Gaps = 41/469 (8%)
Query: 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAG 112
+ + ++D + ++A + + +S + I + + LA ++G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58
Query: 113 KLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP 172
K+ A+ + Y ++ G +L+ L T+ EP+G++ I+P P
Sbjct: 59 MGIVEDKVIKNHFASEFI-YNKYKDEQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNP 116
Query: 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPT 228
T+ K +L +I P + A L A AG P ++ +
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176
Query: 229 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA 288
A+ H DI + TG + + AA S+ KP G P++I + D+ A
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK 348
L+ F+ G +C + V V + +YDE +++ + D VR+ +D
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLIDG 290
Query: 349 KQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408
+I+ E A G + + V+ D A E P + +
Sbjct: 291 ALNAKIVGQPATAIAEMA-----GVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGM 344
Query: 409 MKFKTVEEAIKSA----NNTRYGLAAGIMTKDL---NVANTVSRSIRAGIIWINCYFAFD 461
+ E+A+ A G +G+ T + ++ I IN
Sbjct: 345 FRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHG 404
Query: 462 ---SDCPYGGYKMSGFGRDCGLE---------SLHNYLQVKSVVTPIFN 498
+ G CG + + K+V N
Sbjct: 405 GIGDLYNFNVAPSLTLG--CGSWGGNSISENVGPKHLINKKTVAKRAEN 451
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 380 bits (977), Expect = e-122
Identities = 134/491 (27%), Positives = 215/491 (43%), Gaps = 21/491 (4%)
Query: 14 FKMPEIKFTKLFINGEFVD---SVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
+P F N V+ + T + IA+ + AV AAR
Sbjct: 502 IPLPCDLFAPERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARA 561
Query: 71 AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
F W R R + + A L+E + L + GK A + ++ AA+
Sbjct: 562 GFAG--WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFC 618
Query: 131 RYYAGAADKIHGEVLKMSRAL--QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGC 188
RYYA K+ G M GV I PWNFP +F +V+ AL AG
Sbjct: 619 RYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGN 678
Query: 189 TMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248
+++ KPAEQTP IA L AG+P L +V G G GAA+ +H DI V FTGST
Sbjct: 679 SVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGST 737
Query: 249 DVGRQVMQAAATSN--LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
+V R + +A A + + P+ E GG + ++ AD + + G+ C A
Sbjct: 738 EVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSAL 797
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
++VQE + D + + A+ +GDP D A GP +D + R+ ++I K E
Sbjct: 798 RLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEAR 857
Query: 367 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNT 424
G P +G ++ P IF + E+FGP++ +++++ +E +++ T
Sbjct: 858 LHFAGPAP---EGCFVAPHIFELT--EAGQLTEEVFGPILHVVRYRPENLERVLRAIERT 912
Query: 425 RYGLAAGIMTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLE 481
YGL G+ ++ + + ++ G I++N A P+GG +SG G + G
Sbjct: 913 GYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPH 972
Query: 482 SLHNYLQVKSV 492
L + ++V
Sbjct: 973 YLARFATEQTV 983
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 359 bits (925), Expect = e-120
Identities = 167/490 (34%), Positives = 253/490 (51%), Gaps = 26/490 (5%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
EI+ K +INGE+V+S + + + ++P T E + ++ KED+D A + A +AF W
Sbjct: 2 EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TW 59
Query: 78 PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
+ + R I+ F L+ +H E LA L ++ GK A G++ + + AGA
Sbjct: 60 SKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAP 118
Query: 138 DKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ G+ L ++ ++ R PIGVVG I P+NFP + A+A G T I+KP+E
Sbjct: 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+TPL+ L + AG+P GV NVV G I H +I +SF GS VG V
Sbjct: 179 RTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYV-Y 236
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGI 315
+ NLK V G K+ ++ +D ++ ++G F + GE C+A + V V+EGI
Sbjct: 237 KKGSENLKRVQSLTGAKNHTIVLNDANLEDTVT-NIVGAAFGSAGERCMACAVVTVEEGI 295
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
DEF KL EK +G+ D V GP + + R LSYIE G EGA L+ G+
Sbjct: 296 ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN 355
Query: 376 G-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434
GY++ PTIF NVT +M I K+EIF PV+++++ K ++EAI+ AN + + A + T
Sbjct: 356 VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFT 415
Query: 435 KDLNVANTVSRSIRAGIIWIN-------CYFAFDSDCPYGGYKMSGFGRD---CGLESLH 484
+ N +I AG++ IN +F F G+K S FG G +S+
Sbjct: 416 SNSNAIRYFRENIDAGMLGINLGVPAPMAFFPF------SGWKSSFFG-TLHANGKDSVD 468
Query: 485 NYLQVKSVVT 494
Y + K V
Sbjct: 469 FYTRKKVVTA 478
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 353 bits (909), Expect = e-117
Identities = 154/503 (30%), Positives = 243/503 (48%), Gaps = 30/503 (5%)
Query: 9 SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA 68
++L+ + FI+G+ V SG+ +P TGE +A D+ AV++A
Sbjct: 14 GTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESA 73
Query: 69 RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN 128
+ A W + R + +KF L+ ++ LA + + + GK AK GDI
Sbjct: 74 KAAQP--KWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLE 130
Query: 129 TLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
+ G E + + Y++R+P+G+ I P+NFP + +PA+A G
Sbjct: 131 VCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACG 190
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
I+KP+E+ P + + A L AG+P G+LNVV G A AI +H DI VSF GS
Sbjct: 191 NAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGS 249
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA- 305
T + R V A N K G K+ ++I D D++ AA+ AL+G + + GE C+A
Sbjct: 250 TPIARYV-YGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAAN-ALIGAGYGSAGERCMAI 307
Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 365
S V V E + KLV ++ +G D GP V K+ RI S I+ G +G
Sbjct: 308 SVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQG 367
Query: 366 ATLLTGGK----PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA 421
A L+ G+ + G++I +F +VT DM I K EIFGPV+++++ + EEA+
Sbjct: 368 AKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLP 427
Query: 422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-------CYFAFDSDCPYGGYKMSGF 474
YG I T+D + A + I G++ +N Y +F GG+K S F
Sbjct: 428 MKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSF------GGWKSSSF 481
Query: 475 GRD---CGLESLHNYLQVKSVVT 494
G D G +S+ + + K++ +
Sbjct: 482 G-DLNQHGTDSIKFWTRTKTITS 503
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 304 bits (780), Expect = 1e-98
Identities = 77/475 (16%), Positives = 151/475 (31%), Gaps = 60/475 (12%)
Query: 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117
++V +++A +A S + I+ AD E LA + + G
Sbjct: 11 IQEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68
Query: 118 AKMGDIPGAANTLRYYAGAADKIHGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176
K+ A+ ++ + +LK + + P+GVV +IP PT+
Sbjct: 69 DKVIKNVFAS---KHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTV 125
Query: 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAA 232
K ++ AG +++ P L + A+ AG P G ++ +
Sbjct: 126 IYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQ 185
Query: 233 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 292
+ H D + TG + + + S+ P G P I ++ A L
Sbjct: 186 LMKHKDTAVILATGGSAMVKAAY-----SSGTPAIGVGPGNGPAFIERSANIPRAVKHIL 240
Query: 293 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD--------PFDPAVRQGP 344
F+ G IC + V V+ + + ++ ++ P P
Sbjct: 241 DSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNP 300
Query: 345 QVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 404
+ K I + A +L + T V + ++ E P
Sbjct: 301 AIVGKSVQHIANLAGLTVPADARVLIAEE--------------TKVGAKIPYSR-EKLAP 345
Query: 405 VMALMKFKTVEEAIKSANNTRY----GLAAGIMTKDLNVANTVSRSIRAGIIWIN----- 455
++A +T +EA + + + Y G I ++D + + + +N
Sbjct: 346 ILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGAL 405
Query: 456 --------CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 502
A C G S + G E N ++ + T + +
Sbjct: 406 GGIGATTNLVPALTLGC--GAVGGSSSSDNIGPE---NLFNIRRIATGVLELEDI 455
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 299 bits (769), Expect = 9e-96
Identities = 114/473 (24%), Positives = 196/473 (41%), Gaps = 34/473 (7%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+ E V + + P +A+ DK ++ A+ AA A W
Sbjct: 66 CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPM 121
Query: 83 AERRGIMLKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
A+R + LK AD++ + + GK A++ + R+ A A ++
Sbjct: 122 ADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELE 181
Query: 142 GEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
GE + + + R G V I P+NF + G ++ KP++ L
Sbjct: 182 GEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL-AGAPALMGNVVLWKPSDTAML 240
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
+ + + AG+P ++ VP GPT G + S + ++FTGS + + + A
Sbjct: 241 ASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300
Query: 261 S-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+ ++ E GGK+ + DV++ L G+ C A SR+YV + +
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360
Query: 316 YDEFEKKLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK 373
+ + + +L+E+ VGDP D +D K F RI ++EH + ++L GG+
Sbjct: 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ 420
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANN-TRYGLAA 430
GYY+EP I + I K EIFGPV+ + + E +K ++ T YGL
Sbjct: 421 CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTG 480
Query: 431 GIMTKDLNVANTVSRSIR--AGIIWINCYFAFDSDC--------PYGGYKMSG 473
+ +D + +R +R AG +IN P+GG + SG
Sbjct: 481 AVFAQDKAIVQEATRMLRNAAGNFYIND------KSTGSVVGQQPFGGARASG 527
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 237 bits (608), Expect = 6e-73
Identities = 117/444 (26%), Positives = 184/444 (41%), Gaps = 59/444 (13%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHS 116
+ AVK AR AF G R + LI+E + ++ AL D K
Sbjct: 18 SKISEAVKRARAAFSSGRTR--PLQFRIQQLEALQRLIQEQEQ--ELVGALAADLHKNEW 73
Query: 117 WAKMGDIPGAANTLRYYAGAADKIHG----EVLKMSRALQG---YTLREPIGVVGHIIPW 169
A ++ + Y K+ E ++ + Q Y EP+GVV I W
Sbjct: 74 NAYYEEVVYVLEEIEY---MIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTW 130
Query: 170 NFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LIALYFAHLAKLAGVPDGV 218
N+P F + + P A+AAG +++KP+E + +I Y D
Sbjct: 131 NYP---FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD--------KDLY 179
Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
V+ G G + D + +TGST VG+ +M AAA +L PV+LELGGKSP +
Sbjct: 180 -PVING-GVPETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYV 235
Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
+ D++ A G N G+ CVA + I ++ +KL + K + D
Sbjct: 236 DKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDA--- 292
Query: 339 AVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 394
++ + + F R++ IE K + GG YI PTI T+V
Sbjct: 293 --KKSRDYGRIISARHFQRVMGLIEGQK-----VAYGGT-GDAATRYIAPTILTDVDPQS 344
Query: 395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI 454
+ + EIFGPV+ ++ +++EEAI+ N LA + + + V + +G +
Sbjct: 345 PVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAA 404
Query: 455 N-CYFAF-DSDCPYGGYKMSGFGR 476
N P+GG SG G
Sbjct: 405 NDVIVHITLHSLPFGGVGNSGMGS 428
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 218 bits (556), Expect = 2e-65
Identities = 111/446 (24%), Positives = 189/446 (42%), Gaps = 60/446 (13%)
Query: 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKL 114
+D A + F R+ + + + + + E A+ AL D GK
Sbjct: 26 SPAKIDSLFSAQKAYFATRATA--DVGFRKQSLERLKEAVINNKE--ALYSALAEDLGKP 81
Query: 115 HSWAKMGDIPGAANTLRYYAGAADKIH----------GEVLKMSRALQGYTLREPIGVVG 164
+ +I + + + A + +++ S Y ++EP GV
Sbjct: 82 KDVVDLAEIGAVLHEIDF---ALAHLDEWVAPVSVPSPDIIAPSEC---YVVQEPYGVTY 135
Query: 165 HIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LIALYFAHLAKLAG 213
I P+N+P + ++P A+ G T I+KP+E TP +IA F
Sbjct: 136 IIGPFNYP---VNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF-------- 184
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+ V+ G G + + S D + FTGS +VG+ VMQAAA +L PV LELGGK
Sbjct: 185 -APEYVAVIQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGGK 240
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
PL++ D D++ + + G N G+ +A +YV + D ++LVE+ K +
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPE 300
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED 393
+ V ++Q R++S +E + + G + T+ V +
Sbjct: 301 INSTGKL-----VTERQVQRLVSLLEATQGQVLV----GSQADVSKRALSATVVDGVEWN 351
Query: 394 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTR-YGLAAGIMTKDLNVANTVSRSIRAGII 452
+ E+FGP++ +++F +V AI N LA + KD++VA + I++G
Sbjct: 352 DPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDA 411
Query: 453 WIN--CYFAFDSDCPYGGYKMSGFGR 476
+N AF P+GG SG G
Sbjct: 412 QVNGVMLHAFSPYLPFGGIGASGMGE 437
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 2e-07
Identities = 59/435 (13%), Positives = 114/435 (26%), Gaps = 134/435 (30%)
Query: 133 YAGAADKIHGEVLKMSRALQGY-TLREPIGVVGHII-PWNFPTTMFFMKVSPALAAGCTM 190
Y I E + S + Y R+ + + +N ++K+ AL +
Sbjct: 91 YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL-----L 145
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT--AGAAIASHMDIDKVSFT--- 245
++PA + + GVL G G T A S+ K+ F
Sbjct: 146 ELRPA---KNVLID------------GVL----GSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 246 ---GSTDVGRQVMQAAAT--SNLKPVSLELGGKSP------------------------- 275
+ + V++ + P S
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 276 LLIFDDV-DVNTAADMALLG--ILFNKGEICVASS------RVYVQEGIYDEFEKKLVEK 326
LL+ +V + L IL V + V+
Sbjct: 247 LLVLLNVQNAKAWNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 327 --AKAWVVGDPFD---------P--------AVRQGP-------QVDKKQFDRIL-SYIE 359
K ++ P D P ++R G V+ + I+ S +
Sbjct: 306 LLLK-YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 360 HGKREGATLLTGGKPIGKKGYYIEPTIF---TNVTEDMLIA--KNEIFGPVMALM-KFKT 413
L +P + + ++F ++ +L + I VM ++ K
Sbjct: 365 V-------L----EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413
Query: 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVS--RSIRAGIIWINCYFAFDSDCPYGGYKM 471
K + + + + + + N + RSI ++ Y +
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI------VDHYNIPKTFDSD----- 462
Query: 472 SGFGRDCGLESLHNY 486
D L Y
Sbjct: 463 -----DLIPPYLDQY 472
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 54/381 (14%), Positives = 108/381 (28%), Gaps = 96/381 (25%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSV-SGKTFETIDPRTGEAIARI--AEGDKEDVDL--AV 65
+ L K + L + + +V + K + + +I K+ D A
Sbjct: 235 RRLLKSKPYE-NCLLV----LLNVQNAKAWNAFNLS-----CKILLTTRFKQVTDFLSAA 284
Query: 66 KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS---WAKMGD 122
+ DH + E + ++LK+ D + L E L + D
Sbjct: 285 TTTHISLDHHSMT-LTPDEVKSLLLKYLDCRPQD---LPR-EVLTTNPRRLSIIAESIRD 339
Query: 123 IPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLRE--------------PIGVVGHII 167
+ ++ DK+ +++ S L+ R+ P ++ +
Sbjct: 340 GLATWDNWKHVN--CDKLT-TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS--L 394
Query: 168 PWNFPTTMFFMKVSPALAAGCTMIVK-PAEQTPLI-ALYFAHLAKLAGVPD--------- 216
W M V L ++ K P E T I ++Y KL
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYS-LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453
Query: 217 GVLNVVPGFGPTAGAA-------IASHMDIDKVSFTGSTDVGRQV------MQAAATSNL 263
+ I H+ + + R V ++ +
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHHLK--NIEHPERMTLFRMVFLDFRFLEQK----I 507
Query: 264 KPVSLELGGKSPLL------------IFDDVDVNTAADMALLGILFNKGEICVAS--SRV 309
+ S +L I D+ A+L L E + S + +
Sbjct: 508 RHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDL 567
Query: 310 YVQ-------EGIYDEFEKKL 323
++ E I++E K++
Sbjct: 568 -LRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 8e-05
Identities = 44/243 (18%), Positives = 76/243 (31%), Gaps = 83/243 (34%)
Query: 236 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295
HMD + TG + ++ V + D+ D DM I
Sbjct: 6 HMDFE----TGEHQYQYK--------DILSVFEDA-------FVDNFDCKDVQDM-PKSI 45
Query: 296 LFNK--GEICVAS---SRVYV--------QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342
L + I ++ S QE + +F ++++ +++ P RQ
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM-SPIKTEQRQ 104
Query: 343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT--EDMLIAKNE 400
P + + YIE R L + K NV+ + L +
Sbjct: 105 -PSMMTR------MYIEQRDR----LYNDNQVFAKY----------NVSRLQPYLKLRQ- 142
Query: 401 IFGPVMALMKFKTVEEAIKSANN-TRYGLA-AGIMTKDLNVANTVSRSIRA------GII 452
AL++ ++ A N G+ +G K VA V S + I
Sbjct: 143 ------ALLE-------LRPAKNVLIDGVLGSG---KTW-VALDVCLSYKVQCKMDFKIF 185
Query: 453 WIN 455
W+N
Sbjct: 186 WLN 188
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 502 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.73 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.13 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-112 Score=886.42 Aligned_cols=478 Identities=42% Similarity=0.736 Sum_probs=458.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
.+..++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 4456799999999988899999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
|.++|++++++|+|||+.++...|+..+++.+++++.+++++.+...+...+...+++++|+|||++|+|||||+...++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999987655799999999999999988887777766667788999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999998866
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 65789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
++++||+++..+++++.++|++++.+|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 99999999999999999999999999999999998653 36899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999999999988788899999999999999999999999999999999
Q ss_pred ecCC
Q 010735 495 PIFN 498 (502)
Q Consensus 495 ~~~~ 498 (502)
+.+.
T Consensus 482 ~~g~ 485 (490)
T 2wme_A 482 ELGD 485 (490)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 9864
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-106 Score=848.49 Aligned_cols=476 Identities=33% Similarity=0.584 Sum_probs=453.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999987789999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceee-cCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+.++|++++++|+|||+.++. .|+..+++.+++++.++++..+...+...+...++++ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999765 7999999999999999988776655444456678889 99999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 87 78999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 416 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 416 (502)
+++++||+++..+++++.+++++++.+|+++++||...+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999976443 799999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++.
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999998876
Q ss_pred CC
Q 010735 497 FN 498 (502)
Q Consensus 497 ~~ 498 (502)
..
T Consensus 485 ~~ 486 (506)
T 3rh9_A 485 AE 486 (506)
T ss_dssp --
T ss_pred cc
Confidence 54
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-106 Score=849.52 Aligned_cols=478 Identities=39% Similarity=0.706 Sum_probs=455.3
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| + .|+.++..+|.++|++++++|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 3468999999988778899999999999999999999999999999999999 8 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+.++|++++++|+|||+.++. .|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 999999999999999999764 6999999999999999887766555433 45567899999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|++++.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999878899999999999999999999999999999
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|
T Consensus 269 aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 88 78999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
+++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 3799999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999999
Q ss_pred EecCC--CCCC
Q 010735 494 TPIFN--SPWL 502 (502)
Q Consensus 494 ~~~~~--~~~~ 502 (502)
+++.. ..||
T Consensus 508 ~~~~~~~~~~~ 518 (520)
T 3ed6_A 508 TNTNPQLVNWF 518 (520)
T ss_dssp EESSCCCCCCS
T ss_pred EcCCCCccCcc
Confidence 98763 4565
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-106 Score=847.79 Aligned_cols=481 Identities=41% Similarity=0.712 Sum_probs=457.9
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFAD 94 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~ 94 (502)
++...++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| + .|+.++.++|.++|+++++
T Consensus 19 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~ 96 (528)
T 3u4j_A 19 IKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVAD 96 (528)
T ss_dssp CCCBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHH
T ss_pred hccccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHH
Confidence 45567899999999987788999999999 99999999999999999999999999 7 7999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhH
Q 010735 95 LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPT 173 (502)
Q Consensus 95 ~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (502)
+|+++.++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+
T Consensus 97 ~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 175 (528)
T 3u4j_A 97 LILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPF 175 (528)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHH
Confidence 999999999999999999999987 78999999999999999888766655543 4556889999999999999999999
Q ss_pred HhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 174 ~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.
T Consensus 176 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 255 (528)
T 3u4j_A 176 IIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTK 255 (528)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987789999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 256 i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 334 (528)
T 3u4j_A 256 LGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFG 334 (528)
T ss_dssp HHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCC
Confidence 999987 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
+|.++++++||+++..+++++.+++++++.+|+++++||..... +|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 335 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 414 (528)
T 3u4j_A 335 DPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFK 414 (528)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeC
Confidence 99999999999999999999999999999999999999987544 79999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|
T Consensus 415 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v 494 (528)
T 3u4j_A 415 TADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494 (528)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999999887889999999999999999999999999999999
Q ss_pred EEecC-CCCCC
Q 010735 493 VTPIF-NSPWL 502 (502)
Q Consensus 493 ~~~~~-~~~~~ 502 (502)
+++.+ ..+||
T Consensus 495 ~~~~~~~~~~~ 505 (528)
T 3u4j_A 495 HVTLGRPAPWF 505 (528)
T ss_dssp EEESSCCCCSC
T ss_pred EEeCCCCCCcc
Confidence 98865 33454
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-106 Score=843.59 Aligned_cols=471 Identities=36% Similarity=0.612 Sum_probs=450.4
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
++|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 999999999999999975 57999999999999998877666554432 4566789999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+||.|.||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999987
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
.++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 249 -~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 -PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp -GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||+++..+++++.+++++++.+|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999987555799999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|++.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999877788999999999999999999999999999999764
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-105 Score=841.90 Aligned_cols=472 Identities=34% Similarity=0.612 Sum_probs=450.9
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
...++||||+|+.+.++ +++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 100 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKE 100 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 34579999999987656 999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
.++|++++++|+|||..++...|+..+++.+++++.+++++.+...+. ..+...+++++|+|||++|+|||||+...++
T Consensus 101 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (498)
T 4f3x_A 101 ADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW 180 (498)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHH
Confidence 999999999999999998646899999999999999988776654432 2456688999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 259 (498)
T 4f3x_A 181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAA 259 (498)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999998888999999999999999999999999999998
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+
T Consensus 260 a-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 260 A-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp H-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred H-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 8 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
++++||++++.+++++.+++++++++|+ ++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 418 (498)
T 4f3x_A 339 ENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDA 418 (498)
T ss_dssp GCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCH
T ss_pred cCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHH
Confidence 9999999999999999999999999999 999999875558999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
|+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|++++
T Consensus 419 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 419 VAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 9999999999999999999999999999999999999998887799999999999999999999999999999998875
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-105 Score=842.24 Aligned_cols=470 Identities=38% Similarity=0.662 Sum_probs=450.0
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.+
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 110 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANAD 110 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999887788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...++++
T Consensus 111 ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 189 (504)
T 3ek1_A 111 DIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKA 189 (504)
T ss_dssp HHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999975 56999999999999999887766554432 34567899999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++.+.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 190 a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa- 268 (504)
T 3ek1_A 190 APALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268 (504)
T ss_dssp HHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-
T ss_pred HHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh-
Confidence 9999999999999999999999999999999999999999999988889999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 269 ~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 348 (504)
T 3ek1_A 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGV 348 (504)
T ss_dssp GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++||+++..+++++.+++++++.+|+++++||.. .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 349 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 349 VIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999976 26899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
+|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++++
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 99999999999999999999999999999999999987778899999999999999999999999999999998765
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-105 Score=842.02 Aligned_cols=475 Identities=43% Similarity=0.794 Sum_probs=447.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++.|+.++..+|.++|++++++|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998656779999999999999999999999999999999999973249999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc----cccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+|++++++|+|||+.++...|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 99999999999999976548999999999999999887766544431 22246899999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.++++.|+.||+||.|.||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999998
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 76357899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC--HH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VE 415 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~ 415 (502)
+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+| +|
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~d 436 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD 436 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHH
Confidence 9999999999999999999999999999999999976544699999999999999999999999999999999999 99
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 437 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 437 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999999999999999999877778999999999999999999999999999999875
Q ss_pred c
Q 010735 496 I 496 (502)
Q Consensus 496 ~ 496 (502)
+
T Consensus 517 ~ 517 (517)
T 2o2p_A 517 Y 517 (517)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-105 Score=835.30 Aligned_cols=475 Identities=40% Similarity=0.686 Sum_probs=449.5
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
+..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.++..+|.++|++++++|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44478999999987667899999999999999999999999999999999999732499999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999765489999999999999998887776544333345689999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8889999999999999999999999999999987
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 246 -~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp -HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred -hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
+++||+++..+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDA 404 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHH
Confidence 9999999999999999999999999999999997643 26899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
|+++|+++|||++||||+|.++++++++++++|+|+||+++ ..+.+||||+|.||+|+++|++|+++|++.|+|++++.
T Consensus 405 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~~ 483 (495)
T 3b4w_A 405 IAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMG 483 (495)
T ss_dssp HHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCTT
T ss_pred HHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEccC
Confidence 99999999999999999999999999999999999999987 77899999999999999999999999999999988754
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-104 Score=832.46 Aligned_cols=478 Identities=54% Similarity=0.948 Sum_probs=451.3
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|++++++|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 3468999999987667899999999999999999999999999999999999721 399999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...+++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 99999999999999999776789999999999999998877665444334445689999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999876
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||+++..+++++.+++++++++|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 419 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976534699999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCC
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|.+++..
T Consensus 420 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~~ 498 (501)
T 1bxs_A 420 RANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQ 498 (501)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSC
T ss_pred HHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccCC
Confidence 9999999999999999999999999999999999999877778999999999999999999999999999999887643
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-104 Score=836.95 Aligned_cols=479 Identities=44% Similarity=0.751 Sum_probs=451.8
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADL 95 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~ 95 (502)
.+..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 445679999999988778899999999999999999999999999999999999721 49999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCee-eec---ccccccceeecCCeEEEEEcCCCh
Q 010735 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNF 171 (502)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~ 171 (502)
|++|.++|++++++|+|||..++ ..|+..+++.+++++.+++++.+.. .+. ..+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 99999999999999999999976 5799999999999999887665432 111 134567899999999999999999
Q ss_pred hHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHH
Q 010735 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (502)
Q Consensus 172 P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g 251 (502)
|+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (502)
Q Consensus 252 ~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (502)
+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999987 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 332 ~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
+|+|.++++++||++++.+++++.+++++++.+|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|+
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 999999999999999999999999999999999999999997654 479999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhc
Q 010735 410 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489 (502)
Q Consensus 410 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~ 489 (502)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~ 482 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCe
Confidence 99999999999999999999999999999999999999999999999877788999999999999999999999999999
Q ss_pred cEEEEecCCC
Q 010735 490 KSVVTPIFNS 499 (502)
Q Consensus 490 k~v~~~~~~~ 499 (502)
|+|+++....
T Consensus 483 k~v~~~~~~~ 492 (503)
T 3iwj_A 483 KQVTQYISEE 492 (503)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEeCCCC
Confidence 9999876543
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-105 Score=838.69 Aligned_cols=477 Identities=34% Similarity=0.587 Sum_probs=452.1
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
+....++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34556899999999987788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+. ..+...++.++|+|||++|+|||||+...
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999999764 799999999999999988876655443 24556789999999999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (502)
Q Consensus 257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~ 336 (502)
.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 246 ~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~ 324 (497)
T 3k2w_A 246 TSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324 (497)
T ss_dssp HHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred Hhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 987 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--cCC--CCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP--IGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
++++++||+++..+++++.+++++++.+|+++++||.. ... +|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (497)
T 3k2w_A 325 DADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404 (497)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeC
Confidence 99999999999999999999999999999999999973 222 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|
T Consensus 405 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v 484 (497)
T 3k2w_A 405 SMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484 (497)
T ss_dssp CHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred EEecCC
Q 010735 493 VTPIFN 498 (502)
Q Consensus 493 ~~~~~~ 498 (502)
.+++..
T Consensus 485 ~~~~~~ 490 (497)
T 3k2w_A 485 YINEAE 490 (497)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 988753
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-104 Score=834.85 Aligned_cols=481 Identities=38% Similarity=0.681 Sum_probs=453.4
Q ss_pred CCCcccccceeEcCeEeeCCCCCe-EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 010735 15 KMPEIKFTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93 (502)
Q Consensus 15 ~~~~~~~~~~~i~G~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a 93 (502)
+.......++||||+|+.+.++.+ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++
T Consensus 13 ~~~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a 90 (503)
T 1a4s_A 13 GSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAA 90 (503)
T ss_dssp TTCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHH
T ss_pred CCccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHH
Confidence 333445567899999998766678 99999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhH
Q 010735 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173 (502)
Q Consensus 94 ~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (502)
++|+++.++|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+
T Consensus 91 ~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 169 (503)
T 1a4s_A 91 RIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPF 169 (503)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchH
Confidence 9999999999999999999999976 579999999999999998877665444333445689999999999999999999
Q ss_pred HhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 174 ~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+ ++++.|+.||+||+|+||||+.+|+.
T Consensus 170 ~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~ 248 (503)
T 1a4s_A 170 MIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKK 248 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977 88999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 249 i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 327 (503)
T 1a4s_A 249 VMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVG 327 (503)
T ss_dssp HHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCC
Confidence 999988 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc--C----CCCceEecEEEeeCCCCCcccccceeeceEE
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 407 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 407 (502)
+|.++++++||+++..+++++.+++++++.+|+++++||... . ..|+|++|||+.+++++|++++||+||||++
T Consensus 328 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 407 (503)
T 1a4s_A 328 DPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMS 407 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEE
Confidence 999999999999999999999999999999999999999764 2 2589999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhh
Q 010735 408 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 487 (502)
Q Consensus 408 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~ 487 (502)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|+
T Consensus 408 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~ 487 (503)
T 1a4s_A 408 VLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYS 487 (503)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSE
T ss_pred EEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred hccEEEEecCCCC
Q 010735 488 QVKSVVTPIFNSP 500 (502)
Q Consensus 488 ~~k~v~~~~~~~~ 500 (502)
+.|+|++++++.+
T Consensus 488 ~~k~v~~~~~~~~ 500 (503)
T 1a4s_A 488 QLKTVIVEMGDVD 500 (503)
T ss_dssp EEEEEEECCSCCC
T ss_pred CceEEEEccCCCC
Confidence 9999998876543
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-104 Score=830.25 Aligned_cols=474 Identities=35% Similarity=0.578 Sum_probs=443.0
Q ss_pred CCCCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 010735 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93 (502)
Q Consensus 14 ~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a 93 (502)
....|+...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++
T Consensus 18 ~~~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a 95 (497)
T 3i44_A 18 GPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKIL 95 (497)
T ss_dssp ----CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHH
T ss_pred CCcccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHH
Confidence 345566677899999999987778999999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeeccccccccee-ecCCeEEEEEcCCChh
Q 010735 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFP 172 (502)
Q Consensus 94 ~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P 172 (502)
++|+++.++|++++++|+|||+.++...|+..+++.+++++............ ..+...++. ++|+|||++|+|||||
T Consensus 96 ~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P 174 (497)
T 3i44_A 96 EIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWP 174 (497)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcch
Confidence 99999999999999999999999875489999999999998876554322211 124457788 9999999999999999
Q ss_pred HHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHH
Q 010735 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (502)
Q Consensus 173 ~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 252 (502)
+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.++++.|+.||+||.|+||||+.+|+
T Consensus 175 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~ 254 (497)
T 3i44_A 175 MNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGK 254 (497)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 253 ~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
.|++.++ +++||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 255 ~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 332 (497)
T 3i44_A 255 DISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQV 332 (497)
T ss_dssp HHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccC
Confidence 9999987 88999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-ccC--CCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
|+|.|+++++||++++.+++++.+++++++.+|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 412 (497)
T 3i44_A 333 GPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLL 412 (497)
T ss_dssp CCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEE
Confidence 99999999999999999999999999999999999999994 322 269999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhc
Q 010735 410 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489 (502)
Q Consensus 410 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~ 489 (502)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. ....+.+||||+|.||+|+++|++|+++|++.
T Consensus 413 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~ 491 (497)
T 3i44_A 413 PFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDT 491 (497)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEE
T ss_pred ecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcce
Confidence 99999999999999999999999999999999999999999999995 55668899999999999999999999999999
Q ss_pred cEEE
Q 010735 490 KSVV 493 (502)
Q Consensus 490 k~v~ 493 (502)
|+|+
T Consensus 492 K~v~ 495 (497)
T 3i44_A 492 KAIS 495 (497)
T ss_dssp EEES
T ss_pred eEEE
Confidence 9874
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-104 Score=833.13 Aligned_cols=476 Identities=54% Similarity=0.894 Sum_probs=449.9
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|++++++|++|.
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 458999999987667899999999999999999999999999999999999720 3999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 99999999999999997767899999999999999888776654443334456899999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|++.++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999998764
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++||+++..+++++.+++++++++|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 419 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999765346999999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
+|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|.+++.
T Consensus 420 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 420 ANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999988754
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-105 Score=840.53 Aligned_cols=473 Identities=39% Similarity=0.677 Sum_probs=451.0
Q ss_pred CcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 010735 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (502)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (502)
.|++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|
T Consensus 10 ~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 87 (517)
T 3r31_A 10 KAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIM 87 (517)
T ss_dssp TTCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred hcccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHH
Confidence 356677899999999887888999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhh----hcCeeeecccccccceeecCCeEEEEEcCCChh
Q 010735 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP 172 (502)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (502)
+++.++|++++++|+|||..++ |+..+++.+++++.++++ +.+...+...+. .+++++|+|||++|+|||||
T Consensus 88 ~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P 163 (517)
T 3r31_A 88 RERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYP 163 (517)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcch
Confidence 9999999999999999999975 999999999999998877 666655544455 89999999999999999999
Q ss_pred HHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHH
Q 010735 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (502)
Q Consensus 173 ~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 252 (502)
+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+||.|+||||+.+|+
T Consensus 164 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 164 QQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 778999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 253 ~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 243 ~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 321 (517)
T 3r31_A 243 KVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMIL 321 (517)
T ss_dssp HHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccC
Confidence 9999987 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
|+|.++++++||++++.+++++.++|++++++|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|+
T Consensus 322 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 401 (517)
T 3r31_A 322 GDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVL 401 (517)
T ss_dssp CCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEE
T ss_pred CCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEE
Confidence 99999999999999999999999999999999999999993121 369999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhc
Q 010735 410 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489 (502)
Q Consensus 410 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~ 489 (502)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|++|+++|++.
T Consensus 402 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~ 481 (517)
T 3r31_A 402 DFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSEL 481 (517)
T ss_dssp EECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEE
T ss_pred EeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhce
Confidence 99999999999999999999999999999999999999999999999887889999999999999999999999999999
Q ss_pred cEEEEecC
Q 010735 490 KSVVTPIF 497 (502)
Q Consensus 490 k~v~~~~~ 497 (502)
|+|+++..
T Consensus 482 K~v~~~~~ 489 (517)
T 3r31_A 482 KTVYVSTG 489 (517)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 99988764
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-104 Score=831.29 Aligned_cols=469 Identities=32% Similarity=0.520 Sum_probs=444.8
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER 87 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999887788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc--c----ccccceeecCCeEEEEEcCCChhH
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPT 173 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (502)
.++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. . +...++.++|+|||++|+|||||+
T Consensus 88 ~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 88 KEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 9999999999999999976 46999999999999998887766544432 1 345688999999999999999999
Q ss_pred HhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 174 ~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+||.|+||||+.+|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987889999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999864 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
+|. +++++||+++..+++++.+++++++.+|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 999 9999999999999999999999999999999999974 689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 400 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v 479 (505)
T 3prl_A 400 ANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVT 479 (505)
T ss_dssp HHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999999876 458899999999999999999999999999999
Q ss_pred EEecCC
Q 010735 493 VTPIFN 498 (502)
Q Consensus 493 ~~~~~~ 498 (502)
++++..
T Consensus 480 ~~~~~~ 485 (505)
T 3prl_A 480 VLNLAE 485 (505)
T ss_dssp EEEC--
T ss_pred EEeCCC
Confidence 987653
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-104 Score=832.25 Aligned_cols=472 Identities=42% Similarity=0.698 Sum_probs=448.9
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876678999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||..++. .|+..+++.+++++.++++..+...+. ..+...+++++|+|||++|+|||||+...++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999765 899999999999999888776665443 234456889999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa- 262 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA- 262 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999977788999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 263 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 263 DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--------CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~ 421 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence 999999999999999999999999999999997643 2699999999999 9999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|
T Consensus 422 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v 501 (515)
T 2d4e_A 422 DEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI 501 (515)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEE
Confidence 99999999999999999999999999999999999999999999877778999999999999999999999999999999
Q ss_pred EEecCC
Q 010735 493 VTPIFN 498 (502)
Q Consensus 493 ~~~~~~ 498 (502)
++++..
T Consensus 502 ~~~~~~ 507 (515)
T 2d4e_A 502 ALPLRP 507 (515)
T ss_dssp EEESSC
T ss_pred EEcCCC
Confidence 987653
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-104 Score=828.46 Aligned_cols=475 Identities=33% Similarity=0.572 Sum_probs=449.0
Q ss_pred CcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 010735 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (502)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (502)
+.....++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|
T Consensus 2 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 79 (479)
T 2imp_A 2 SVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGI 79 (479)
T ss_dssp -CCEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 344556789999999876678999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHh
Q 010735 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
+++.++|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+..
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 158 (479)
T 2imp_A 80 RERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFL 158 (479)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHH
Confidence 9999999999999999999976 47999999999999998877666544432 334568999999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.++++.|+.||++|.|.||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 159 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 239 ~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 317 (479)
T 2imp_A 239 ATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 317 (479)
T ss_dssp HHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCc
Confidence 9988 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 336 FD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 336 ~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
.+ +++++|||+++.+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~ 397 (479)
T 2imp_A 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397 (479)
T ss_dssp TTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred cccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence 99 99999999999999999999999999999999999764336899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 398 ~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 398 EDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999976
Q ss_pred e
Q 010735 495 P 495 (502)
Q Consensus 495 ~ 495 (502)
+
T Consensus 478 ~ 478 (479)
T 2imp_A 478 Q 478 (479)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-104 Score=827.13 Aligned_cols=471 Identities=37% Similarity=0.650 Sum_probs=449.7
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999987789999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
++|++++++|+|||..++ ..|+..+++.+++++.+..+..+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 999999999999999975 57999999999999988877655544432 3556789999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999987
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 246 -~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 -KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp -TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred -hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||++++.+++++.+++++++.+|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999999987544689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|++.
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999999999999999887888999999999999999999999999999999875
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-104 Score=826.76 Aligned_cols=470 Identities=37% Similarity=0.632 Sum_probs=445.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
...++||||+|+.+.+ .+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 98 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEEN 98 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 3357899999998655 8899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
.++|++++++|+|||..++...|+..+++.+++++.++++..++..+.. .+...++.++|+|||++|+|||||+...++
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (495)
T 1wnd_A 99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAW 178 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHH
Confidence 9999999999999999976544999999999999998877765544432 334568899999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 257 (495)
T 1wnd_A 179 KLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257 (495)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999997778899999999999999999999999999998
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 258 a-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 336 (495)
T 1wnd_A 258 A-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDE 336 (495)
T ss_dssp G-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTST
T ss_pred H-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccC
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-ccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK-PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 416 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 416 (502)
++++|||+++.+++++.+++++++++| +++++||. ... .|+|+.|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 ~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 415 (495)
T 1wnd_A 337 STELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 415 (495)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSS-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCC-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHH
Confidence 999999999999999999999999999 99999997 532 699999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 416 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 416 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999999999999999999999999999999999877778999999999999999999999999999999775
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-104 Score=832.77 Aligned_cols=477 Identities=30% Similarity=0.454 Sum_probs=448.0
Q ss_pred CCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 010735 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (502)
Q Consensus 16 ~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (502)
.+|+...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++
T Consensus 21 ~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 98 (521)
T 4e4g_A 21 QSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQL 98 (521)
T ss_dssp ---CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred hhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 3456677899999999887788999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHH
Q 010735 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTT 174 (502)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (502)
|+++.++|++++++|+|||..++ ..|+..+++.+++++.+.+.+.+...+. ..+...++.++|+|||++|+|||||+.
T Consensus 99 l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 177 (521)
T 4e4g_A 99 LNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGM 177 (521)
T ss_dssp HHHHHHHHHHHHHHHHCSCHHHH-HHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHH
Confidence 99999999999999999999976 5799999999999998777665554332 244567899999999999999999999
Q ss_pred hhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHH
Q 010735 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (502)
Q Consensus 175 ~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i 254 (502)
..++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+ .+.++.|+.||+||.|+||||+.+|+.|
T Consensus 178 ~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i 256 (521)
T 4e4g_A 178 IPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYV 256 (521)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999994 4567999999999999999999999999
Q ss_pred HHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc-cHHHHHHHHHHHHhccccC
Q 010735 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 255 ~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~g 333 (502)
++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|
T Consensus 257 ~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG 335 (521)
T 4e4g_A 257 YGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIG 335 (521)
T ss_dssp HHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBC
T ss_pred HHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCC
Confidence 99987 789999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
+|.++++++||+++..+++++.+++++++.+|+++++||... ..+|+|+.|||+.+++++|++++||+||||++|+
T Consensus 336 ~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 415 (521)
T 4e4g_A 336 PYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVV 415 (521)
T ss_dssp CTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEC
T ss_pred CCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEE
Confidence 999999999999999999999999999999999999999753 1479999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC--CcchHHHHHhh
Q 010735 410 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNY 486 (502)
Q Consensus 410 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g--~~~g~~~~~~~ 486 (502)
+|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.||+| +++|++|+++|
T Consensus 416 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~f 495 (521)
T 4e4g_A 416 RARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFW 495 (521)
T ss_dssp CBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHT
T ss_pred EeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHh
Confidence 999999999999999999999999999999999999999999999998654 478999999999999 79999999999
Q ss_pred hhccEEEEecC
Q 010735 487 LQVKSVVTPIF 497 (502)
Q Consensus 487 ~~~k~v~~~~~ 497 (502)
++.|+|++++.
T Consensus 496 t~~K~v~~~~~ 506 (521)
T 4e4g_A 496 TRTKTITSRWP 506 (521)
T ss_dssp EEEEEEEECCC
T ss_pred heEEEEEEecC
Confidence 99999998765
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-103 Score=831.46 Aligned_cols=472 Identities=32% Similarity=0.550 Sum_probs=445.9
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
..++||||+|+. ++.+++++||+| |+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 678999999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHh-hhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
.++|++++++|+|||..++. .|+..+++.+++++.+ .+...+...+...+...++.++|+|||++|+|||||+...++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 99999999999999999764 5999999999999998 555555555443456788999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999998
Q ss_pred hcCC------CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 259 ATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 259 a~~~------~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
+ .+ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 a-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 A-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp T-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred h-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 7 66 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+|.++++++||+++..+++++.+++++++.+| ++++||......|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEc-CcCCC-CCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-CYFAF-DSDCPYGGYKMSGFG-RDCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN-~~~~~-~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~ 489 (502)
|+||||+++|+++|||++||||+|.++++++++++++|+|+|| .+... .+.+||||+|.||+| +++|++|+++|++.
T Consensus 430 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~ 509 (538)
T 3qan_A 430 DFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA 509 (538)
T ss_dssp SHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCe
Confidence 9999999999999999999999999999999999999999999 55444 789999999999999 99999999999999
Q ss_pred cEEEEecCCC
Q 010735 490 KSVVTPIFNS 499 (502)
Q Consensus 490 k~v~~~~~~~ 499 (502)
|+|+++....
T Consensus 510 k~v~~~~~~~ 519 (538)
T 3qan_A 510 KTVSEMYAEN 519 (538)
T ss_dssp EEEEEEC---
T ss_pred EEEEEecCCc
Confidence 9999887543
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-102 Score=822.70 Aligned_cols=472 Identities=34% Similarity=0.540 Sum_probs=432.6
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
..+..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (508)
T 3r64_A 9 GIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLE 86 (508)
T ss_dssp TBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHH
Confidence 35667899999999887788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc--cccccceeecCCeEEEEEcCCChhHHh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
++.++|++++++|+|||..++ ..|+..+++.+++++.+.++..+ ..+.. .+...++.++|+|||++|+|||||+..
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 164 (508)
T 3r64_A 87 EHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNL 164 (508)
T ss_dssp HTHHHHHHHHHHTSCCCHHHH-HHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence 999999999999999999976 45999999999999998877655 44432 346678999999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~-~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i 254 (502)
.++++++||++||+||+|||+.+|+++ .++++++.++|+|+|++++++|++.++++.|+.||++|.|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999777899999999999999999999999999
Q ss_pred HHHHhcC--CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 255 MQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 255 ~~~aa~~--~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
++.++ . ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 245 GELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99987 6 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+|.++++++||++++.+++++++++++++.+|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~ 491 (502)
|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++|++.|+
T Consensus 401 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp SHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999999998754 6889999999999999999999999999999
Q ss_pred EEEecC
Q 010735 492 VVTPIF 497 (502)
Q Consensus 492 v~~~~~ 497 (502)
|+++..
T Consensus 481 v~~~~~ 486 (508)
T 3r64_A 481 IGIKRS 486 (508)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 998764
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-103 Score=820.65 Aligned_cols=474 Identities=28% Similarity=0.462 Sum_probs=426.8
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHE 81 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999877788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc--cccccceeecCCeEEEEEcCCChhHHhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
+.++|++++++|+|||+.++. .|+..+++.+++++.+.+++.+...+.. .+...+++++|+|||++|+|||||+...
T Consensus 82 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 160 (485)
T 4dng_A 82 NRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLS 160 (485)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHH
Confidence 999999999999999999865 5999999999999998887766554432 3466789999999999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~-~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
++++++||++||+||+|||+.+|+++ .++.+++.++|+|+|++|++++++.++++.|+.||++|.|.||||+.+|+.|+
T Consensus 161 ~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~ 240 (485)
T 4dng_A 161 MRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIG 240 (485)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999998777899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 241 ~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 241 EIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 9987 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415 (502)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 415 (502)
.++++++||+++..+++++.+++++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 396 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQ 396 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999975 68999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 397 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~ 476 (485)
T 4dng_A 397 EAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISI 476 (485)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999999998754 6889999999999999999999999999999998
Q ss_pred ecCCC
Q 010735 495 PIFNS 499 (502)
Q Consensus 495 ~~~~~ 499 (502)
++...
T Consensus 477 ~~~~~ 481 (485)
T 4dng_A 477 QKQYR 481 (485)
T ss_dssp EC---
T ss_pred ecCCc
Confidence 87543
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-102 Score=814.48 Aligned_cols=460 Identities=31% Similarity=0.534 Sum_probs=430.9
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (502)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (502)
Q Consensus 104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 183 (502)
++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. +...++.++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 999999999999976 57999999999999998887766554433 5567899999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l~~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
|++||+||+|||+.+|+++..+++++.++ |+|+|++++++|++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999987788999999999999999999999999999864
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||+++..+++++.+++++++.+|+++++||.. .|+|+.|||+ +++++|++++||+||||++|++|+| ||||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999999 99999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCC
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
++|+++|||++||||+|.++++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|++|+++|++.|+|+++...
T Consensus 387 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~~ 466 (486)
T 3pqa_A 387 IANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAE 466 (486)
T ss_dssp HHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC--
T ss_pred HHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCCc
Confidence 99999999999999999999999999999999999998653 46899999999999999999999999999999887643
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-102 Score=814.62 Aligned_cols=455 Identities=27% Similarity=0.448 Sum_probs=436.5
Q ss_pred eEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Q 010735 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (502)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (502)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||..+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 899999999999999999999999999999999999999997
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCC
Q 010735 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (502)
Q Consensus 118 ~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~ 197 (502)
+. .|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 65 79999999999999988877665544445567889999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 198 ~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
+|+++..|++++.++|+|+|++|+|+|++.++++ |+.||+||.|+||||+.+|+.|++.++ +++||+++|+|||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcce
Confidence 9999999999999999999999999998777788 999999999999999999999999987 78999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 357 (502)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
+++++.+|+++++||...+.+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999999986555899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++..
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred HHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 999999999999999999987788999999999999999999999999999999988653
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-102 Score=817.13 Aligned_cols=467 Identities=37% Similarity=0.624 Sum_probs=444.4
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++|.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999753 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||..++. .|+..+++.+++++.++++..+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 999999999999999764 699999999999999888766665443 234567899999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec---CCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~---g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++ |.+.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 7667789999999999999999999999999999
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc-cccCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPF 336 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~ 336 (502)
++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 248 aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 88 889999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCc-eEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415 (502)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 415 (502)
++++++||+++..+++++.+++++++++|+++++||.... .|+ |++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCT-TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC-CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 9999999999999999999999999999999999997643 688 99999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999999999999999887778899999999999999999999999999999775
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-102 Score=813.31 Aligned_cols=467 Identities=32% Similarity=0.489 Sum_probs=441.3
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
|.+.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+
T Consensus 1 ~~~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 76 (475)
T 1euh_A 1 MTKQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILM 76 (475)
T ss_dssp -CCBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCcccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 455668999999998633 899999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cc----ccc-ceeecCCeEEEEEcCCCh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNF 171 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~ 171 (502)
+|.++|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+ ... ++.++|+|||++|+||||
T Consensus 77 ~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 155 (475)
T 1euh_A 77 RDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNY 155 (475)
T ss_dssp HTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTS
T ss_pred HhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCc
Confidence 999999999999999999976 57999999999999998877665544432 23 345 889999999999999999
Q ss_pred hHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHH
Q 010735 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (502)
Q Consensus 172 P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g 251 (502)
|+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.++++.|+.||++|.|+||||+.+|
T Consensus 156 P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g 235 (475)
T 1euh_A 156 PVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIG 235 (475)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHH
Confidence 99999999999999999999999999999999999999999999999999999777789999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (502)
Q Consensus 252 ~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (502)
+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 236 ~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 312 (475)
T 1euh_A 236 ERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312 (475)
T ss_dssp HHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 99999864 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEe
Q 010735 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (502)
Q Consensus 332 ~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 411 (502)
+|+|.+ ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 313 ~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~ 388 (475)
T 1euh_A 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRV 388 (475)
T ss_dssp BSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred CCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEec
Confidence 999999 999999999999999999999999999999999975 5899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcC-cCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC-YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||+ +....+.+||||+|.||+|+++|++|+++|++.|
T Consensus 389 ~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 468 (475)
T 1euh_A 389 TSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVK 468 (475)
T ss_dssp SCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred CCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCee
Confidence 999999999999999999999999999999999999999999999 6666789999999999999999999999999999
Q ss_pred EEEEec
Q 010735 491 SVVTPI 496 (502)
Q Consensus 491 ~v~~~~ 496 (502)
+|++++
T Consensus 469 ~v~~~~ 474 (475)
T 1euh_A 469 SVVFDI 474 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998764
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-102 Score=816.85 Aligned_cols=469 Identities=39% Similarity=0.625 Sum_probs=423.4
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
|++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+
T Consensus 4 m~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 81 (478)
T 3ty7_A 4 MRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYE 81 (478)
T ss_dssp CEECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 45567899999999987888999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
++.++|++++++|+|||..++...|+..+++.+++++.++++..+... ....++.++|+|||++|+|||||+...+
T Consensus 82 ~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 157 (478)
T 3ty7_A 82 NRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTS 157 (478)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHH
Confidence 999999999999999999987578999999999999998877655432 2457889999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.||++|.|+||||+.+|+.|++.
T Consensus 158 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~ 237 (478)
T 3ty7_A 158 LKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEK 237 (478)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CS
T ss_pred HHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999998
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 238 aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 316 (478)
T 3ty7_A 238 AA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRE 316 (478)
T ss_dssp TT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 77 78999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-C--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-G--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
+++++||+++..+++++++++++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 317 DGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 99999999999999999999999999999999999432 1 36899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++|++.|+|+.
T Consensus 397 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999999999 5566889999999999999999999999999999873
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-101 Score=811.66 Aligned_cols=471 Identities=29% Similarity=0.478 Sum_probs=441.8
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
...++.||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++
T Consensus 21 ~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 96 (500)
T 2j6l_A 21 REENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALRE 96 (500)
T ss_dssp CSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 45678899999994 567899999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+.++|++++++|+|||..++ ..|+..+++.+++++.+++++.+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus 97 ~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (500)
T 2j6l_A 97 KIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYG 175 (500)
T ss_dssp THHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHH
Confidence 99999999999999999976 67999999999999988877665544332 23345788999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~----~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
+++++||++||+||+|||+.+|+++..+++++. ++|+|+|++++|+| +.++++.|+.||++|+|+||||+.+|+.
T Consensus 176 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~ 254 (500)
T 2j6l_A 176 WNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQ 254 (500)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999999988876 56999999999999 7788999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 255 i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 333 (500)
T 2j6l_A 255 VGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVG 333 (500)
T ss_dssp HHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccC
Confidence 999987 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
+|.++++++|||+++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 334 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (500)
T 2j6l_A 334 NPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN 413 (500)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC
T ss_pred CcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC
Confidence 99999999999999999999999999999999999999976444699999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHH--hhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVS--RSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
+||||+++|+++|||+++|||+|.+++++++ +++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k 493 (500)
T 2j6l_A 414 EEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRS 493 (500)
T ss_dssp HHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceE
Confidence 9999999999999999999999999999999 779999999998755 3478999999999999999999999999999
Q ss_pred EEEEec
Q 010735 491 SVVTPI 496 (502)
Q Consensus 491 ~v~~~~ 496 (502)
+|++++
T Consensus 494 ~v~~~~ 499 (500)
T 2j6l_A 494 TCTINY 499 (500)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 998764
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-101 Score=812.23 Aligned_cols=466 Identities=29% Similarity=0.450 Sum_probs=441.1
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
.+++||||+|+.+ + .+++++||+||+++++++.++.+|+++++++|++||+. .|+.++.++|.++|++++++|++|.
T Consensus 18 ~~~~~i~g~~~~~-~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGS-G-QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECC-S-CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecC-C-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 3468999999976 3 78999999999999999999999999999999999862 3999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc---c--ccccceeecCCeEEEEEcCCChhHHh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---R--ALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. . +...++.++|+|||++|+|||||+..
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999764 7999999999999998887766654432 2 23568999999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||++|.|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9865 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC-ceEecEEEeeCC---CCCcccccceeeceEEEEEe
Q 010735 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKF 411 (502)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~ 411 (502)
.++++++||++++.+++++.+++++++.+|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 57 999999999999 99999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCc-CCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY-FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++ ....+.+||||+|.||+|+++|++|+++|++.|
T Consensus 407 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k 486 (501)
T 1uxt_A 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 486 (501)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCcee
Confidence 9999999999999999999999999999999999999999999998 556789999999999999999999999999999
Q ss_pred EEEEecC
Q 010735 491 SVVTPIF 497 (502)
Q Consensus 491 ~v~~~~~ 497 (502)
+|.+++.
T Consensus 487 ~v~~~~~ 493 (501)
T 1uxt_A 487 TIVFNYK 493 (501)
T ss_dssp EEEEECT
T ss_pred EEEEecC
Confidence 9988764
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-101 Score=806.34 Aligned_cols=470 Identities=33% Similarity=0.535 Sum_probs=442.0
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999876678999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeee-cccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||+.++ ..|+..+++.+++++.+.+...+...+ ...+...+++++|+|||++|+|||||+...++++
T Consensus 84 ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 84 ELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 99999999999999975 579999999999998776666555433 1234456889999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.++++.|+.||+||.|.||||+.+|+.|++.++
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa- 240 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS- 240 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH-
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh-
Confidence 99999999999999999999999999999999999999999999 5578999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcE-EEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.+++
T Consensus 241 ~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~ 319 (486)
T 1t90_A 241 ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDG 319 (486)
T ss_dssp HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccC
Confidence 789999999999999999999999999999999999999999999999 999999 999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI 418 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 418 (502)
+++||+++..+++++.+++++++.+|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai 399 (486)
T 1t90_A 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 399 (486)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999999999997432 368999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC--CcchHHHHHhhhhccEEEEe
Q 010735 419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g--~~~g~~~~~~~~~~k~v~~~ 495 (502)
+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|+.+
T Consensus 400 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 400 EIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp HHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred HHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999986443 478999999999999 89999999999999999887
Q ss_pred cC
Q 010735 496 IF 497 (502)
Q Consensus 496 ~~ 497 (502)
+.
T Consensus 480 ~~ 481 (486)
T 1t90_A 480 YP 481 (486)
T ss_dssp CC
T ss_pred cC
Confidence 63
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-100 Score=808.23 Aligned_cols=468 Identities=31% Similarity=0.550 Sum_probs=438.6
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
.+++||||+|+. ++.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++
T Consensus 37 ~~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 36789999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeee--cccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
.++|++++++|+|||+.++. .|+..+++.+++++.++++..+...+ ...+...++.++|+|||++|+|||||+...+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 99999999999999999764 79999999999999988777654322 1234456889999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++++|+|.+.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred Hhc-----CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 258 aa~-----~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
++. +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 751 568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+| ++++++|||+++.+++++.+++++++++| ++++||......|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999999 8999997633369999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~ 489 (502)
|+||||+++|+++|||++||||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.+++++|++.
T Consensus 430 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~ 509 (516)
T 1uzb_A 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCe
Confidence 99999999999999999999999999999999999999999998654 3578999999999999 48899999999999
Q ss_pred cEEEEe
Q 010735 490 KSVVTP 495 (502)
Q Consensus 490 k~v~~~ 495 (502)
|+|+++
T Consensus 510 k~v~~~ 515 (516)
T 1uzb_A 510 KAVAER 515 (516)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 999875
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-99 Score=790.74 Aligned_cols=456 Identities=29% Similarity=0.470 Sum_probs=434.0
Q ss_pred CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Q 010735 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (502)
Q Consensus 35 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (502)
+..+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 356799999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEec
Q 010735 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (502)
Q Consensus 115 ~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kp 194 (502)
..++ ..|+..+++.+++++.+.++..+.......+...+++++|+|||++|+|||||++..++++++||++||+||+||
T Consensus 83 ~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHH-HHHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 9976 579999999999999988766554422224556789999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC
Q 010735 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (502)
Q Consensus 195 s~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~ 274 (502)
|+.+|.++.++++++.++|+|+|++|++++ +.+.+..|+.||++|.|+||||+.+|+.|++.++ .+++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCC
Confidence 999999999999999999999999999999 4567899999999999999999999999999987 78999999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 010735 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (502)
Q Consensus 275 ~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~ 354 (502)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEec
Q 010735 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434 (502)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t 434 (502)
.+++++++.+|+++++||.....+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999986556799999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 435 KDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 435 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEe
Confidence 9999999999999999999999887788999999999999999999999999999999875
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-98 Score=796.25 Aligned_cols=472 Identities=25% Similarity=0.395 Sum_probs=438.5
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
..+++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 35679999999985 34778999998 799999999999999999999999999 89999999999999999999999
Q ss_pred h-HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee-ecccccccceeecCCeEEEEEcCCChhHHhh
Q 010735 99 H-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 99 ~-~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
+ +++|++++++|+|||+.++...++..+++.+++++.+++++.+... ....+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 8 9999999999999999987544499999999999998877765322 1122344567788899999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
.+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhcCCCC------ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735 257 AAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (502)
Q Consensus 257 ~aa~~~~~------~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (502)
.++ .+++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 297 ~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 987 6677 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEE
Q 010735 331 VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (502)
Q Consensus 331 ~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 408 (502)
++|+| .|+++++||++++.+++++.++|+++++ +|+++++||..+..+|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876667999999999999999999999999999999
Q ss_pred EEeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchH
Q 010735 409 MKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGL 480 (502)
Q Consensus 409 ~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~ 480 (502)
++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+. ..+.+||||+|.||+| +++|+
T Consensus 456 ~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~ 535 (563)
T 4e3x_A 456 YVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGP 535 (563)
T ss_dssp EEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTST
T ss_pred EEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCH
Confidence 99997 79999999 799999999999999999999999975 99999999764 3578999999999998 89999
Q ss_pred HHHHhhhhccEEEEecC
Q 010735 481 ESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 481 ~~~~~~~~~k~v~~~~~ 497 (502)
+++++|+++|+|..++.
T Consensus 536 ~~l~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 536 HYILRWTSPQVIKETHK 552 (563)
T ss_dssp TGGGGGBCCEEEEEECS
T ss_pred HHHHHhCceEEEEEeCc
Confidence 99999999999998863
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-98 Score=782.23 Aligned_cols=461 Identities=28% Similarity=0.415 Sum_probs=433.5
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+ ++..+.++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999986 356899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+...+...+++++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 9999999999999976 579999999999999887766655433223345567799999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|+++.++++++.++|+|+|++|++++ +.+.++.|+.||++|.|+||||+.+|+.|++.++ .+
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-GQ 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-TC
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-cc
Confidence 999999999999999999999999999999999999999999 6788999999999999999999999999999987 78
Q ss_pred CCce-EEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEeccc-HHHHHHHHHHHHhccccCC-CCCCC
Q 010735 263 LKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPA 339 (502)
Q Consensus 263 ~~~~-~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-~~~~~ 339 (502)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 7999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||+++..+++++.+++++++.+|+++++||.....+|+|++|||+. ++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999997765679999999998 999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||.+ ++++|++.|+|+++.
T Consensus 400 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999999999999999999999999999865 4578999999999975 589999999998764
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-97 Score=778.36 Aligned_cols=461 Identities=30% Similarity=0.461 Sum_probs=428.5
Q ss_pred CCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 010735 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (502)
Q Consensus 34 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (502)
++.++++++||+||+++++++.++.+|+++++++|++||+ .|++++.++|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred CHHHHhhccHHHHHHHHHHHHHhhhhhcCee-eec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEE
Q 010735 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (502)
Q Consensus 114 ~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv 191 (502)
+... ..|+...++.+++++..+.+..... ... .++...+..++|+|||++|+|||||+...++++++||++||+||
T Consensus 81 ~~~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH--HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8653 4699999999999988776544332 222 13345567889999999999999999999999999999999999
Q ss_pred EecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecC
Q 010735 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (502)
Q Consensus 192 ~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~g 271 (502)
+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.| +|.|.||||+.+|+.|++.++ .++||+++|+|
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCC
Confidence 999999999999999999999999999999999 56778889876 899999999999999999987 78999999999
Q ss_pred CCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHH
Q 010735 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (502)
Q Consensus 272 G~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~ 351 (502)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceE
Q 010735 352 DRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 430 (502)
Q Consensus 352 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 430 (502)
+++.+++++++.+|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 394 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSA 394 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeE
Confidence 9999999999999999999997653 468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhccEEEEecC--CCCCC
Q 010735 431 GIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF--NSPWL 502 (502)
Q Consensus 431 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~~~~~--~~~~~ 502 (502)
||||+|.++++++++++++|+|+||++.. ..+..||||+|.||+| +++|.+|+++|+++|+|+++.. ..||+
T Consensus 395 ~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w 471 (474)
T 4h7n_A 395 AVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWW 471 (474)
T ss_dssp EEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTS
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCC
Confidence 99999999999999999999999999765 4578999999999998 7899999999999999998764 45553
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-96 Score=813.67 Aligned_cols=472 Identities=32% Similarity=0.522 Sum_probs=444.8
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
...++||||+|+. ++.+++++||+| ++++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3567899999997 468999999998 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
++++|++++++|+|||..++ ..|+..+++.+++++.+++++.+...+. ..+..+++.++|+|||++|+|||||+...+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 99999999999999999975 5799999999999999988766543332 345567889999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred Hhc-----CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 258 aa~-----~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 762 367999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+|.++++++||+++..+++++.++|++++.+| ++++||..+...|+|+.|||+.++++++++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999997655459999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCC-cchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~-~~g~~~~~~~~~~ 489 (502)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+|+ .+|++++++|++.
T Consensus 924 d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~ 1003 (1026)
T 4f9i_A 924 DFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDP 1003 (1026)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceE
Confidence 99999999999999999999999999999999999999999999765 34789999999999995 7899999999999
Q ss_pred cEEEEecC
Q 010735 490 KSVVTPIF 497 (502)
Q Consensus 490 k~v~~~~~ 497 (502)
|+|..+..
T Consensus 1004 k~v~~~~~ 1011 (1026)
T 4f9i_A 1004 RVVTENTM 1011 (1026)
T ss_dssp EEEEEECC
T ss_pred EEEEEecc
Confidence 99988763
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-96 Score=775.90 Aligned_cols=464 Identities=23% Similarity=0.332 Sum_probs=422.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
..++||||+|+.+.+ .+++++||+||+++++++.++ +|+++++++|++| |+ .|+.++.++|.++|++++++|++|
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 467899999997644 579999999999999999998 8999999999999 58 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCe-------eeecc-cc-cccceeecCC-eEEEEEcCC
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS-RA-LQGYTLREPI-GVVGHIIPW 169 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~ 169 (502)
.++|++++++|+|||+.++. .|+..+++.+++++.+++++.+. ..+.. .+ ...+..++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 99999999999999999764 69999999999999887665431 12221 11 1357889997 999999999
Q ss_pred ChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhC-CCcCEEEEcCC
Q 010735 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGS 247 (502)
Q Consensus 170 n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~-~~v~~V~ftGs 247 (502)
|||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+ +..+ +++|+|+||||
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS 237 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS 237 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence 99999999999999999999999999999999999999999999 799999999986543 3333 67999999999
Q ss_pred cHHHHHHHHHHh-cCCCCceEEecCCCCceEEccCC-----CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHH
Q 010735 248 TDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (502)
Q Consensus 248 ~~~g~~i~~~aa-~~~~~~~~~e~gG~~~~iV~~da-----dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~ 321 (502)
+.+|+.|++.++ .+++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 238 ~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 317 (534)
T 2y53_A 238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317 (534)
T ss_dssp HHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHH
Confidence 999999998753 36799999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC------CCCceEecEEEeeCCCC--
Q 010735 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPTIFTNVTED-- 393 (502)
Q Consensus 322 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~-- 393 (502)
+|+++++++++|+|.++++++|||+++.+++++.++|+++ .+|+++++||.... ..|+|++|||+.+++++
T Consensus 318 ~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 396 (534)
T 2y53_A 318 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 396 (534)
T ss_dssp HHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGC
T ss_pred HHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCcccc
Confidence 9999999999999999999999999999999999999999 68999999997421 35899999999999877
Q ss_pred CcccccceeeceEEEEEeC---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ceeEEEEcCcCC----
Q 010735 394 MLIAKNEIFGPVMALMKFK---TV-----EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFA---- 459 (502)
Q Consensus 394 ~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~---- 459 (502)
|++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++..
T Consensus 397 ~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~ 476 (534)
T 2y53_A 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQ 476 (534)
T ss_dssp SSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTC
T ss_pred CHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccc
Confidence 6899999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred -----CCCCCCcCCCCCCCCCCc-chHHHHHhhhhccEEEE
Q 010735 460 -----FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 494 (502)
Q Consensus 460 -----~~~~~pfgG~~~SG~g~~-~g~~~~~~~~~~k~v~~ 494 (502)
..+.+||||+|.||+|++ +|.+|+++|++.|++..
T Consensus 477 ~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 477 TGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred cccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 357899999999999999 69999999999999875
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-94 Score=750.40 Aligned_cols=444 Identities=25% Similarity=0.395 Sum_probs=398.8
Q ss_pred CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Q 010735 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH 115 (502)
Q Consensus 36 ~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 115 (502)
...+++.||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||.
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPK 82 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 45688999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHhhccHHHHHHHHHHHHHhhhhhcCe-eeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEE
Q 010735 116 SWAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (502)
Q Consensus 116 ~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv 191 (502)
.++...|+..+++.+++++..+++.... ..+. ..+...+++++|+|||++|+|||||+...++++++||++||+||
T Consensus 83 ~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 162 (457)
T 3lns_A 83 DVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCI 162 (457)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 9875569999999999999877655432 2221 13456789999999999999999999999999999999999999
Q ss_pred EecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecC
Q 010735 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (502)
Q Consensus 192 ~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~g 271 (502)
+|||+.+|+++..+++++.++ +|+|++|+++| +.+.+..|+. +++|.|+||||+.+|+.|++.++ +++||+++|+|
T Consensus 163 lKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElG 238 (457)
T 3lns_A 163 IKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238 (457)
T ss_dssp EECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECC
T ss_pred EECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECC
Confidence 999999999999999999999 99999999999 6778899998 78999999999999999999987 88999999999
Q ss_pred CCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHH
Q 010735 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (502)
Q Consensus 272 G~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~ 351 (502)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||+++++++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~ 313 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQV 313 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 6665 99999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhc-CCCCceE
Q 010735 352 DRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN-TRYGLAA 430 (502)
Q Consensus 352 ~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~ 430 (502)
+++.++++++ ++++++||.... +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 314 ~rv~~~i~~a---~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 314 QRLVSLLEAT---QGQVLVGSQADV-SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHHHHHC---CSEEEECCCEEG-GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHHHHHhc---CCeEEeCCccCC-CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 9999999985 359999997643 6899999999999999999999999999999999999999999999 9999999
Q ss_pred EEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 431 GIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 431 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
+|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 390 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 390 YVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 99999999999999999999999999753 46889999999999999999999999999999875
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-92 Score=738.65 Aligned_cols=429 Identities=26% Similarity=0.381 Sum_probs=394.4
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (502)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 134 (502)
..+.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++...|+..++..+++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999 89999999999999999999999999999999999999999876679999999888877
Q ss_pred HhhhhhcCe-ee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735 135 GAADKIHGE-VL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (502)
Q Consensus 135 ~~~~~~~~~-~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~ 210 (502)
...+..... .. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 655433221 11 11123457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHH
Q 010735 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (502)
Q Consensus 211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~ 290 (502)
++ +|+|++++++|.+ +.+..|+.| ++|.|+||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.
T Consensus 172 ~a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 172 QY-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp HH-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred Hh-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 98 9999999999944 456677777 8999999999999999999987 889999999999999999999999999999
Q ss_pred HHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 010735 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (502)
Q Consensus 291 iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (502)
+++++|.|+||.|++++|||||+++||+|+++|+++++++ .|+|.++++++||+++..+++++.+++ +|+++++
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~ 321 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAY 321 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEE
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEe
Confidence 9999999999999999999999999999999999999998 599999999999999999999999998 6999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhccee
Q 010735 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 450 (502)
Q Consensus 371 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g 450 (502)
||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 322 GG~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G 400 (469)
T 3sza_A 322 GGTGDA-ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSG 400 (469)
T ss_dssp CCCEET-TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCS
T ss_pred CCccCC-CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 998754 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 451 IIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 451 ~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
.|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 401 ~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 401 GVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred eEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 999999863 4689999999999999999999999999999998864
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-92 Score=746.61 Aligned_cols=458 Identities=23% Similarity=0.293 Sum_probs=414.9
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEE-EEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (502)
+++..++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|
T Consensus 26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 98 (528)
T 3v4c_A 26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEI 98 (528)
T ss_dssp CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHH
T ss_pred cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 456678999999997532 99999999998 9999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh--cCeeee----c---ccccccceeecCCeEEEEEc
Q 010735 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREPIGVVGHII 167 (502)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~ 167 (502)
+++.++|++++++|+|||+.++ ..|+..+++.+++++..+++. .+.... . ..+...+++++|+|||++|+
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 177 (528)
T 3v4c_A 99 EARAEAITEIGSQETGLPEARL-NGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFG 177 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEEC
T ss_pred HHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEEC
Confidence 9999999999999999999965 579999999999999888762 222221 1 02345688999999999999
Q ss_pred CCChhHHhhh--hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCceEEEecCCchhHHHHHHhCCCcCE
Q 010735 168 PWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (502)
Q Consensus 168 p~n~P~~~~~--~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~ 241 (502)
|||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|++.+.++++.|+.||+||+
T Consensus 178 PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~ 257 (528)
T 3v4c_A 178 ASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKA 257 (528)
T ss_dssp CSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCE
T ss_pred CCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCE
Confidence 9999999865 89999999999999999999999999998875 56899999999999988789999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhcCCC--CceEEecCCCCceEEccCC---CHHHHHHHHHHHHhccCCCCcCCCcEEEEecc-c
Q 010735 242 VSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-I 315 (502)
Q Consensus 242 V~ftGs~~~g~~i~~~aa~~~~--~~~~~e~gG~~~~iV~~da---dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~-i 315 (502)
|+||||+.+|+.|++.++ .++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +
T Consensus 258 V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i 336 (528)
T 3v4c_A 258 VGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGAD 336 (528)
T ss_dssp EEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHH
T ss_pred EEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccH
Confidence 999999999999999987 677 9999999999999999999 88999999999999999999999999999997 9
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCC--
Q 010735 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED-- 393 (502)
Q Consensus 316 ~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~-- 393 (502)
||+|+++|++++++++. ++.+||+++..+.+++.++++ .+|+++++||.. .|+|+.|||+.+++++
T Consensus 337 ~d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 337 ADRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFL 404 (528)
T ss_dssp HHHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccc
Confidence 99999999999999864 357899998888887777763 479999999975 6999999999988887
Q ss_pred -CcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhhcc--eeEEEEcCcCC---CCCCCC
Q 010735 394 -MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK--DLNVANTVSRSIR--AGIIWINCYFA---FDSDCP 465 (502)
Q Consensus 394 -~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~---~~~~~p 465 (502)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||+++. ..+.+|
T Consensus 405 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~p 484 (528)
T 3v4c_A 405 ADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMV 484 (528)
T ss_dssp HCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCC
T ss_pred cChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCC
Confidence 899999999999999999999999999999999999999999 8999999999998 99999999765 358899
Q ss_pred cCC-CCCCCCCCcc--hHHHHHhhhhccEEEEecC
Q 010735 466 YGG-YKMSGFGRDC--GLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 466 fgG-~~~SG~g~~~--g~~~~~~~~~~k~v~~~~~ 497 (502)
||| +|.||+|+++ |++|+++|+++|++ .++.
T Consensus 485 fGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~p 518 (528)
T 3v4c_A 485 HGGPYPASTNFGATSVGTMSIRRFLRPVAY-QNMP 518 (528)
T ss_dssp CCCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESCC
T ss_pred CCCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcCC
Confidence 999 9999999976 99999999999874 4443
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-89 Score=721.87 Aligned_cols=442 Identities=21% Similarity=0.285 Sum_probs=403.3
Q ss_pred CCCCeEEeecCCCCceE-EEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 010735 34 VSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAG 112 (502)
Q Consensus 34 ~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G 112 (502)
+++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|
T Consensus 4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 81 (510)
T 1ez0_A 4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETA 81 (510)
T ss_dssp -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 46778999999999999 79999999999999999999999 8999999999999999999999999999999999999
Q ss_pred CCHHHHhhccHHHHHHHHHHHHHhhhh--hcCeeee----c--ccc-cccceeecCCeEEEEEcCCChhHHhh--hhhHH
Q 010735 113 KLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLK----M--SRA-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKVS 181 (502)
Q Consensus 113 k~~~~~~~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~ 181 (502)
||+.++ ..|+..+++.+++++..+++ ..+.... . ..+ ...+++++|+|||++|+|||||+... .++++
T Consensus 82 k~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~ 160 (510)
T 1ez0_A 82 LPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTA 160 (510)
T ss_dssp CCHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHH
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHH
Confidence 999865 67999999999999988765 3333221 1 111 13578999999999999999999985 49999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 161 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 240 (510)
T 1ez0_A 161 SALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240 (510)
T ss_dssp HHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHH
Confidence 9999999999999999999999999998 567999999999999777889999999999999999999999999999
Q ss_pred HhcCCC--CceEEecCCCCceEEccCCCHH--HHHHHHHHHHhccCCCCcCCCcEEEEecc-cHHHHHHHHHHHHhcccc
Q 010735 258 AATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 258 aa~~~~--~~~~~e~gG~~~~iV~~dadl~--~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~ 332 (502)
++ .++ ||+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++
T Consensus 241 aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~ 319 (510)
T 1ez0_A 241 AH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP 319 (510)
T ss_dssp HH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred hh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC
Confidence 87 554 9999999999999999999999 99999999999999999999999999999 999999999999998763
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHH-HcCCEEEeCCcccCCCCceEecEEEeeCCCC---CcccccceeeceEEE
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGK-REGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMAL 408 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v 408 (502)
||++++.+.+++.+++++++ .+|+++++||. .|+|+.|||+.+++++ |++++||+||||++|
T Consensus 320 ----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v 385 (510)
T 1ez0_A 320 ----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLI 385 (510)
T ss_dssp ----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEE
T ss_pred ----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEE
Confidence 68889999999999999998 47999999996 2899999999988777 999999999999999
Q ss_pred EEeCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHhhc--ceeEEEEcCcCC---CCCCCCcCC-CCCCCCCC--cc
Q 010735 409 MKFKTVEEAIKSANNTRYGLAAGIMTKDL--NVANTVSRSI--RAGIIWINCYFA---FDSDCPYGG-YKMSGFGR--DC 478 (502)
Q Consensus 409 ~~~~~~~eai~~~n~~~~gl~~~v~t~d~--~~~~~~~~~l--~~g~v~iN~~~~---~~~~~pfgG-~~~SG~g~--~~ 478 (502)
++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++.. ..+.+|||| +|.||+|+ ++
T Consensus 386 ~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~ 465 (510)
T 1ez0_A 386 VVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV 465 (510)
T ss_dssp EEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSS
T ss_pred EEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCc
Confidence 99999999999999999999999999987 7999999999 799999999764 457899999 79999985 47
Q ss_pred hHHHHHhhhhccEEE
Q 010735 479 GLESLHNYLQVKSVV 493 (502)
Q Consensus 479 g~~~~~~~~~~k~v~ 493 (502)
|++|+++|++.|++.
T Consensus 466 G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 466 GAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SGGGGGGGEEEEEEE
T ss_pred cHHHHHHhheEEEEc
Confidence 999999999988764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-87 Score=746.80 Aligned_cols=435 Identities=29% Similarity=0.462 Sum_probs=408.9
Q ss_pred EcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHH
Q 010735 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (502)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~ 132 (502)
++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||+.++ ..|+..+++.+++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHH
Confidence 788999999999999999999 8999999999999999999999999999999999999999975 6799999999999
Q ss_pred HHHhhhhhcCee--eecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735 133 YAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (502)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~ 210 (502)
++..+++..+.. .+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999887765543 333345678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC--CCCceEEecCCCCceEEccCCCHHHHH
Q 010735 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (502)
Q Consensus 211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~--~~~~~~~e~gG~~~~iV~~dadl~~aa 288 (502)
++|+|+|++|+|+|++.+ +..|+.||+||.|+||||+.+|+.|++.++.. .++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998777 99999999999999999999999999988743 479999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE
Q 010735 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (502)
Q Consensus 289 ~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 368 (502)
+.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++.+| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988 88
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhh
Q 010735 369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 446 (502)
Q Consensus 369 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~ 446 (502)
+||..+. .|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+.+++++++
T Consensus 859 -~gg~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~ 934 (1001)
T 3haz_A 859 -HFAGPAP-EGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDR 934 (1001)
T ss_dssp -EEECCCC-SSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHH
T ss_pred -eccccCC-CCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHh
Confidence 8887654 699999999974 6889999999999999999996 899999999999999999999999999999999
Q ss_pred cceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHHHHHhhhhccEEEEec
Q 010735 447 IRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 447 l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~~~~ 496 (502)
+++|+|+||+.... .+.+||||+|.||+| +++|++|+++|++.|+|+++.
T Consensus 935 l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 935 VQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999997653 367899999999999 578999999999999999875
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-83 Score=662.30 Aligned_cols=408 Identities=17% Similarity=0.152 Sum_probs=336.5
Q ss_pred eEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh------
Q 010735 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA------ 111 (502)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------ 111 (502)
.--++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+
T Consensus 8 ~~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~ 85 (463)
T 2h5g_A 8 SSGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGR 85 (463)
T ss_dssp ---------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT
T ss_pred cCCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccc
Confidence 345889999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred -CCCHHH---HhhccHHHHHHHHHHHHHhhhhhcCeeeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHH
Q 010735 112 -GKLHSW---AKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184 (502)
Q Consensus 112 -Gk~~~~---~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 184 (502)
|||+.+ ....|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||
T Consensus 86 ~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~AL 163 (463)
T 2h5g_A 86 LAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAI 163 (463)
T ss_dssp SCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHH
T ss_pred CCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHH
Confidence 799873 1246999999999999988777666543321 3345689999999999999887 77766 8999999
Q ss_pred HcCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 185 AAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 185 aaGN~vv~kps~~~~~~~~~l~~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||+||+|||+.+|+++..+++++.++ | |+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa- 240 (463)
T 2h5g_A 164 ASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK- 240 (463)
T ss_dssp HHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS-
T ss_pred HcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC-
Confidence 9999999999999999999999999999 9 9999999999 6678999999999999999999999999999864
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
+||+++|+|||||+||++|||++.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 --l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d----------------------- 294 (463)
T 2h5g_A 241 --GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR----------------------- 294 (463)
T ss_dssp --SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-----------------------
T ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-----------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
||+ + .+++++++++|++++.|+... ..|+|+ +++|++++||+||||++|++|+|+||||++
T Consensus 295 --~p~-----~---~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~ 355 (463)
T 2h5g_A 295 --TPL-----F---DQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDH 355 (463)
T ss_dssp --SHH-----H---HHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHH
T ss_pred --hHH-----H---HHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHH
Confidence 333 2 335788888999998555422 234443 578999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC--Cc--chHHHHHhhhhccEEEEec
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG--RD--CGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g--~~--~g~~~~~~~~~~k~v~~~~ 496 (502)
+|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+| ++ +|++|+++|++.|+|.++.
T Consensus 356 aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 356 IHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred HHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 9999999999999999999999999999999999998777789999999999999 65 9999999999999998875
Q ss_pred C
Q 010735 497 F 497 (502)
Q Consensus 497 ~ 497 (502)
.
T Consensus 436 ~ 436 (463)
T 2h5g_A 436 D 436 (463)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-80 Score=648.65 Aligned_cols=420 Identities=19% Similarity=0.206 Sum_probs=370.6
Q ss_pred EEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHH
Q 010735 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (502)
Q Consensus 52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~ 131 (502)
.++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|.++.++|++++++|+||+..++...+...+.+.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3455678999999999999999 89999999999999999999999999999999999999998764434444444443
Q ss_pred HHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHH----
Q 010735 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH---- 207 (502)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~---- 207 (502)
.+....+ ..+. .....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3332221 1121 222345677889999999999999999999999999999999999999999999999998654
Q ss_pred HHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecC-CCCceEEccCCCHHH
Q 010735 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNT 286 (502)
Q Consensus 208 ~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~g-G~~~~iV~~dadl~~ 286 (502)
++.++|+|+|++++|++++.+.++.|+.||+||+|+||||+.+ .+.++ .++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999987889999999999999999999984 34444 788999 7777 999999999999999
Q ss_pred HHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHH-------hccccCCCC-CCCCcccccCCHHHHHHHHHHH
Q 010735 287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYI 358 (502)
Q Consensus 287 aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i 358 (502)
|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999986 456788887 6789999999999999999999
Q ss_pred HHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH----HHHhcCCCCceEEEec
Q 010735 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI----KSANNTRYGLAAGIMT 434 (502)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~t 434 (502)
+.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t 379 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS 379 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEEC
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence 9988899999999863 456778865 89999999999999999997 7999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCcCC---------CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 435 KDLNVANTVSRSIRAGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 435 ~d~~~~~~~~~~l~~g~v~iN~~~~---------~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
+|.+.++++++++++|+|+||++.. ..+.+|||| +.+|.|+++|..|+++|++.|+|.+...
T Consensus 380 ~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp SCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred CCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 9999999999999999999999864 468999998 8899999999999999999999987654
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-80 Score=646.05 Aligned_cols=396 Identities=16% Similarity=0.163 Sum_probs=324.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHhhccHHH-HHHHHHHHH
Q 010735 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYA 134 (502)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~~~ev~~-~~~~l~~~~ 134 (502)
.+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||. .++...|+.. +++.+++++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58999999999999 8999999999999999999999999999999999999998 7654468888 888888888
Q ss_pred Hhhhhhc------Ceeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHH
Q 010735 135 GAADKIH------GEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205 (502)
Q Consensus 135 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l 205 (502)
..++... +...+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 7776554 443332 12445689999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 206 AHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 206 ~~~l~----~----aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
++++. + +|+|+|++|+|+ +++++++.|+.||+||.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667889999999999999999999999998874 699999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc---CCCCCCCCcccccCCHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRI 354 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~ 354 (502)
|++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |+|.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999887 77532
Q ss_pred HHH-HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 355 LSY-IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 355 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
.++ ++++. ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 334 55554 3667775 4 689887 78899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcC-----CCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG-----GYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfg-----G~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
|+|.+.++++++++++|.|+||++....+.+||| |+|.||+|++ |++|+++|++.|+|..+..
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~ 441 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG 441 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECSS
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC
Confidence 9999999999999999999999987777889999 9999999999 9999999999999987643
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-78 Score=623.82 Aligned_cols=390 Identities=21% Similarity=0.217 Sum_probs=334.9
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHhh-------ccHHHH
Q 010735 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (502)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~~-------~ev~~~ 126 (502)
.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 3221 378889
Q ss_pred HHHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHH
Q 010735 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (502)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~ 203 (502)
++.+++++.+.+.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887643 443332 23456789999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCceEEEecCCch-hHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEE
Q 010735 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (502)
Q Consensus 204 ~l~~~l----~~aGlP~g~~~~v~g~~~-~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV 278 (502)
.+++++ .++|+|+|++++++|.+. .+++.|..||+||.|+||||+.+|+.|++.+ +||+++|+|||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998554 5788888999999999999999999998874 6999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc---CCCCCCCCcccccCCHHHHHHHH
Q 010735 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRIL 355 (502)
Q Consensus 279 ~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~ 355 (502)
++|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999887 6642 13
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435 (502)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 435 (502)
++++++. .| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 318 ~~i~~a~---------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 374 (444)
T 4ghk_A 318 AVLEAAG---------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTE 374 (444)
T ss_dssp HHHHHTT---------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECS
T ss_pred HHHHhcc---------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 4555432 12 11 3567999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC----CcchHHHHHhhhhccEEEEecC
Q 010735 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
|.++++++++++++|.|+||++....+..||||.|.||+| +++|++|+++|++.|+|+++.+
T Consensus 375 d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 375 DHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp BHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred CHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 9999999999999999999998877889999999999998 7889999999999999988754
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-78 Score=619.96 Aligned_cols=390 Identities=19% Similarity=0.220 Sum_probs=345.4
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHh-------hccHHH
Q 010735 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAK-------MGDIPG 125 (502)
Q Consensus 57 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~-------~~ev~~ 125 (502)
..+++++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+||+. .++. ..|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 34689999999999999 8999999999999999999999999999999999999986 4432 258999
Q ss_pred HHHHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHH
Q 010735 126 AANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202 (502)
Q Consensus 126 ~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~ 202 (502)
+++.+++++.+.+. .+...+. ..+...+++++|+|||++|+||| +...++++++||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 99999999988765 3443332 12344688999999999999886 478899999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCceEEEecCC-chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 203 LYFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 203 ~~l~~~l~----~aGlP~g~~~~v~g~-~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
..+++++. ++|+|+|++|+|+|. .+++++.|..||+||.|+||||+.+|+.|++.+ .||+++|+|||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999997 689999999999984 456788899999999999999999999999885 599999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 357 (502)
|++|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999987652
Q ss_pred HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
+.||... .+ |+ ||| +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 359 (427)
T 1o20_A 298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359 (427)
T ss_dssp -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCH
T ss_pred -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCH
Confidence 1233211 12 33 885 245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC----CcchHHHHHhhhhccEEEEecCC
Q 010735 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
+.++++++++++|.|+||++....+.+||||.|.||+| +++|++|+++|++.|+|.+++++
T Consensus 360 ~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~~ 424 (427)
T 1o20_A 360 SNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEYH 424 (427)
T ss_dssp HHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSSC
T ss_pred HHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCCc
Confidence 99999999999999999998777788999999999997 47899999999999999988654
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-76 Score=616.88 Aligned_cols=418 Identities=19% Similarity=0.245 Sum_probs=345.8
Q ss_pred EcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHH-H
Q 010735 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (502)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l-~ 131 (502)
++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++...|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999 8999999999999999999999999999999999999999987655666666666 3
Q ss_pred HHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH-
Q 010735 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (502)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~- 210 (502)
++.. .+..+ .++.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3322 11112 2222234567889999999999999999999999999999999999999999999999998888875
Q ss_pred ---HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHH
Q 010735 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (502)
Q Consensus 211 ---~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~a 287 (502)
++|+|+|++|++++++.+.++.|+.||+||+|+||||+.+++ .++ ..+||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998654 333 678999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 010735 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (502)
Q Consensus 288 a~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (502)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ .||++++++++++.++++++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999765 38999999999999999876667777
Q ss_pred EEeCCccc---CCCCceEecEE-------EeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCC----CCceEEEe
Q 010735 368 LLTGGKPI---GKKGYYIEPTI-------FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR----YGLAAGIM 433 (502)
Q Consensus 368 v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~ 433 (502)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 6 476542 12589999997 567889999876 89999999999999999999999975 99999999
Q ss_pred cCCHHHHHH---HHhhcceeEEEEcCcCCCC-----------CCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCC
Q 010735 434 TKDLNVANT---VSRSIRAGIIWINCYFAFD-----------SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 434 t~d~~~~~~---~~~~l~~g~v~iN~~~~~~-----------~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
|+|.+.+++ +++++++|+|+||++..+. +.+++ |++..|.+...+..+.++|.+.|+|..+..+
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~ 451 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAEN 451 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECCC--
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecCC
Confidence 999888777 9999999999999975431 12222 5556666667777899999999998776543
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.038 Score=54.84 Aligned_cols=336 Identities=18% Similarity=0.196 Sum_probs=174.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-H---HH--Hhhcc---------------HHHHHHHHHHHH
Q 010735 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL-H---SW--AKMGD---------------IPGAANTLRYYA 134 (502)
Q Consensus 76 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~---~~--~~~~e---------------v~~~~~~l~~~~ 134 (502)
.|+.....+-.+..+.+.+-++++.|+-+...++...+- . .+ ....| +..+.+.++.|.
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 355555666666677777777776665444444433221 0 00 00112 223333333333
Q ss_pred HhhhhhcCeeeecccccccceeecCCeEEEEEcCCC---hhHHhhhhhHHHHHHcCCe-EEE-ecCCCcHHHHHHHHHHH
Q 010735 135 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCT-MIV-KPAEQTPLIALYFAHLA 209 (502)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~i~~ALaaGN~-vv~-kps~~~~~~~~~l~~~l 209 (502)
..... ........+|.....++.|+--|++..|.- ||-.. +...+||-.+|.. +|+ -|++. -.....+.-+.
T Consensus 106 ~~Q~~-~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA 182 (423)
T 4gic_A 106 ERQKL-DSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAA 182 (423)
T ss_dssp HHHCC-CCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHH
T ss_pred Hhccc-CCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHH
Confidence 21111 111122235566678889999999999943 66444 4457899999987 333 44332 11222233344
Q ss_pred HHcCCCCceEEEecCCchhHHHHHHh----CCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEec-CCCCc--eEEccCC
Q 010735 210 KLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-GGKSP--LLIFDDV 282 (502)
Q Consensus 210 ~~aGlP~g~~~~v~g~~~~~~~~l~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~-gG~~~--~iV~~da 282 (502)
..+|+.+ +--+ | |.+.-.+|.- -|.||.|+=.|..-+..+ ++.. .. .|-..+ .|-+= +|-++++
T Consensus 183 ~l~Gv~e--Iy~v-G-GAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g--~VgIDm~AGPSEilViAD~~a 253 (423)
T 4gic_A 183 YISGVDR--VFRI-G-GAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FG--QVGIDMVAGPSEILVISDGRT 253 (423)
T ss_dssp HHHTCCE--EECC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BT--TBEECCCCCCCEEEEEECSCS
T ss_pred HhcCCcE--EEEc-C-ChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cC--CcCcccccccceEEEEeCCCC
Confidence 5567543 2212 2 4444455543 578999988888776543 3322 11 122222 23333 3346679
Q ss_pred CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 010735 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK 362 (502)
Q Consensus 283 dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 362 (502)
|.+..+..++.-+=... . .+.++|..+ ++|.+++.+.+.+..-.-| .. +.+ +.+.
T Consensus 254 ~p~~vAaDLlsQAEHd~----~-a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r~---~i~----~~sl 308 (423)
T 4gic_A 254 DPDWIAMDLFSQAEHDE----D-AQAILISPD--AAHLEAVQASIERLLPGME-----------RA---EVI----RTSL 308 (423)
T ss_dssp CHHHHHHHHHHHHTTCT----T-CEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------TH---HHH----HHHH
T ss_pred CHHHHHHHHHHhhccCC----C-CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------cH---HHH----HHHH
Confidence 99998888876544432 2 344666555 3444444444433211001 11 111 1111
Q ss_pred HcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 010735 363 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 442 (502)
Q Consensus 363 ~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~ 442 (502)
.+ +| .++.++|++|+++++|..- .=..-|.++|+. .
T Consensus 309 ~~-------------------------------------~g---~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~ 344 (423)
T 4gic_A 309 ER-------------------------------------RG---GMILVDDLEQAAAVANRIA-PEHLELSVESPE---V 344 (423)
T ss_dssp HH-------------------------------------HC---EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---H
T ss_pred hc-------------------------------------Cc---eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---H
Confidence 10 11 3456799999999999843 236778888874 4
Q ss_pred HHhhcc-eeEEEEcCcCCC--CCC--CCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 443 VSRSIR-AGIIWINCYFAF--DSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 443 ~~~~l~-~g~v~iN~~~~~--~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
+..+++ +|.|++..++.. ..+ .|-.=.+.+|..|+.+.-+...|++..++
T Consensus 345 ~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 345 LVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp HGGGCCCCSEEEEC----------------CCCCTTGGGTCCCCCGGGGEEEEEE
T ss_pred HHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeE
Confidence 677775 899999886531 111 11111334566777777788888887655
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.16 Score=50.44 Aligned_cols=257 Identities=19% Similarity=0.253 Sum_probs=148.5
Q ss_pred cccccceeecCCeEEEEEcCC---ChhHHhhhhhHHHHHHcCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735 149 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~ALaaGN~vv~--kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~ 223 (502)
.|.....++.|+--|++..|. -||-. ++...+||-.+|..=|+ -|+.-.| .+.-....+|+.+ +--+
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~i~p----~iL~AA~l~Gv~e--Iy~v- 184 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIAD----EILYAAQLCGVQD--VFNV- 184 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSSCCH----HHHHHHHHTTCCE--EEEC-
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCCCCH----HHHHHHHHcCCCE--Eeec-
Confidence 355566778899999999996 45544 45557899999987554 3432233 2233345566543 2222
Q ss_pred CCchhHHHHHHh----CCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEec-CCCCc--eEEccCCCHHHHHHHHHHHHh
Q 010735 224 GFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-GGKSP--LLIFDDVDVNTAADMALLGIL 296 (502)
Q Consensus 224 g~~~~~~~~l~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~-gG~~~--~iV~~dadl~~aa~~iv~~~~ 296 (502)
| |.+.-.+|.- -|.||.|+=.|..-+..+ |+........|-..+ .|-+= +|-|++||.+..+..++.-+=
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAE 261 (434)
T 1kae_A 185 G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 261 (434)
T ss_dssp C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 3 4444444432 478999988887765443 221100011222222 23333 334667999998888876543
Q ss_pred ccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc
Q 010735 297 FNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374 (502)
Q Consensus 297 ~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 374 (502)
... . .+.++|..+ ..++..+++.++++.+. .. + ..+.+.
T Consensus 262 Hd~----~-a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r~---~----ia~~sl------------ 302 (434)
T 1kae_A 262 HGP----D-SQVILLTPAADMARRVAEAVERQLAELP---------------RA---E----TARQAL------------ 302 (434)
T ss_dssp TCT----T-CEEEEEESCHHHHHHHHHHHHHHHTTCT---------------TH---H----HHHHHH------------
T ss_pred cCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------hH---H----HHHHHH------------
Confidence 332 2 344566554 23444444444444321 01 1 111111
Q ss_pred cCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEE
Q 010735 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIW 453 (502)
Q Consensus 375 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~ 453 (502)
..- .|+.++|++||++++|..-. =..-|.++|+. .+..++ .+|.|+
T Consensus 303 ----------------------------~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~nAGaIF 349 (434)
T 1kae_A 303 ----------------------------NAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSVF 349 (434)
T ss_dssp ----------------------------TTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCSCSEEE
T ss_pred ----------------------------HcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcCcccchh
Confidence 112 45678999999999998432 36788899874 566777 589999
Q ss_pred EcCcCC---------CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 454 INCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 454 iN~~~~---------~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+..++. .+.-+|- +|..|+.+.-+.+.|++.-++.
T Consensus 350 lG~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 350 LGDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp ESTTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEEE
T ss_pred cCCCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeEE
Confidence 998754 1223444 4566777777888888876653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 502 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 0.0 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 0.0 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-157 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-143 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-119 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-117 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-105 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-96 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-59 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-50 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-21 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 550 bits (1419), Expect = 0.0
Identities = 259/478 (54%), Positives = 345/478 (72%), Gaps = 1/478 (0%)
Query: 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G
Sbjct: 9 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 68
Query: 77 -WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
W +ER ++ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG
Sbjct: 69 PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 128
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPA
Sbjct: 129 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 188
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
EQTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ +
Sbjct: 189 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E I
Sbjct: 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 308
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
YDEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P
Sbjct: 309 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 368
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
G KGY+I+PT+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T
Sbjct: 369 GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTN 428
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
D++ A TVS ++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V
Sbjct: 429 DIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 486
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 544 bits (1402), Expect = 0.0
Identities = 259/488 (53%), Positives = 336/488 (68%), Gaps = 3/488 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 7 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 66
Query: 75 GP-WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
G W R + R ++ + ADLIE LA LE LD GK + + + D+ LRYY
Sbjct: 67 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 127 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 186
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 187 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 246
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 306
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL GG
Sbjct: 307 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
Query: 374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+GY+I+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 367 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 426
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 427 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 486
Query: 494 --TPIFNS 499
P NS
Sbjct: 487 VKVPQKNS 494
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 456 bits (1173), Expect = e-157
Identities = 184/486 (37%), Positives = 288/486 (59%), Gaps = 14/486 (2%)
Query: 25 FINGEFVDSVSGKTFE-TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+ G + S G T E +P TG + ++ E+VD AV++A+ A+ W + +G
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGI 80
Query: 84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER +ML+ A +I E + +A LE ++ GK + DI A + YYAG A + G+
Sbjct: 81 ERSRVMLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGLAPTLSGQ 139
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+++ YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+ +
Sbjct: 140 HIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A + AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM+ +A +
Sbjct: 200 ILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTV 257
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K V+LELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I +F +++
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------K 377
V++ KA VVGDP R G + K Q D++L ++ K+EGA +L GG+P+ K
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
GY++ P + N +DM K EIFGPVM+++ F T EE ++ ANNT +GLA+G+ T+D+
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI- 496
+ A+ V+ ++ AG +IN Y + P+GGYKMSGFGR+ G ++ Y Q+K+V+ +
Sbjct: 438 SRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497
Query: 497 -FNSPW 501
+S +
Sbjct: 498 DVDSLF 503
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 418 bits (1075), Expect = e-143
Identities = 168/474 (35%), Positives = 249/474 (52%), Gaps = 7/474 (1%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
KL INGE V G+ +P TG+ + IAE E VD AV+AA AF W + +
Sbjct: 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTT 59
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGK-LHSWAKMGDIPGAANTLRYYAGAADKI 140
R +LK AD+IEE+ +V A LE+ + GK LHS + A
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+ R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
AL A LAK P GV+N++ G G T G + H + VS TGS G ++
Sbjct: 180 TALKLAELAK-DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT-A 237
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
S++K +ELGGK+P+++FDD D+ + +N G+ C A+ R+Y Q+GIYD
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGKKG 379
+KL G P D + GP +R+ +E K G ++TGG+ G
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG 357
Query: 380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
YY PT+ +D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+
Sbjct: 358 YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGR 417
Query: 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
A+ VS ++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ V+
Sbjct: 418 AHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 356 bits (913), Expect = e-119
Identities = 145/477 (30%), Positives = 223/477 (46%), Gaps = 17/477 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
K ++NGE+ S + +P +G + + E+VD +A++A W S
Sbjct: 5 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQ--PAWRALSY 60
Query: 83 AERRGIMLKFADLIEEHAEVLAVLEALDAGK-----LHSWAKMGDIPGAANTLRYYAGAA 137
ER + K AD++ E + + + + K + + +I A
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
G S+ REP+G+V I P+N+P + K++PAL AG + KP Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
+ L A AG+P GV N + G G G I H ++ ++FTGST +G ++ +
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A ++P+ LELGGK ++ +D D+ A + G G+ C A RV V E + D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 377
E +K+ EK A +G+P D A P +D K D + I +GAT LT K +
Sbjct: 298 ELVEKIREKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIK---R 353
Query: 378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
+G I P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I T D
Sbjct: 354 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 413
Query: 438 NVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
A ++ + G + IN + P+ G K SG G S+ VKSVV
Sbjct: 414 PRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 353 bits (905), Expect = e-117
Identities = 147/481 (30%), Positives = 246/481 (51%), Gaps = 18/481 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
L+I GE+VD+ + +++P E + A+ K + + A++AA +AF W +
Sbjct: 39 PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKT--WKDWP 94
Query: 82 GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD--K 139
+R ++LK A L+ L + GK D+ A + + YYA AA +
Sbjct: 95 QEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALRYR 153
Query: 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ + P+G I PWNFP +F + +A G T+I KPAE
Sbjct: 154 YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAV 213
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
++ + AG P GV+N +PG G GA + H I ++FTGS +VG ++ +AA
Sbjct: 214 VVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273
Query: 260 -----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
+ K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR+ + +G
Sbjct: 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQG 333
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374
Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG +L GGK
Sbjct: 334 AYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKR 391
Query: 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434
+ +GY+I PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL G+ +
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 435 KDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKS 491
+ R G ++ N A P+GG+K+SG G L+ L +L++K+
Sbjct: 452 RKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKA 511
Query: 492 V 492
V
Sbjct: 512 V 512
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 321 bits (822), Expect = e-105
Identities = 134/491 (27%), Positives = 230/491 (46%), Gaps = 16/491 (3%)
Query: 11 KSLFKM-PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAAR 69
+ + K + ++ GE+ S G+ E P IA++ +E+V+ +
Sbjct: 5 EGVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLF 62
Query: 70 QAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANT 129
+ G ER ++ K AD+IE + +V A + ++AGK S A +G++ A +
Sbjct: 63 KRGRWS-ARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDR 120
Query: 130 LRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184
LR KI G+ + + +G REP+GVV I P+N+P K++ +
Sbjct: 121 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 180
Query: 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
G ++VKP+ PL A AG P + ++ G A +A + VSF
Sbjct: 181 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVA-DDRVAAVSF 239
Query: 245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 304
TGST+VG +V++ +K +ELGG P ++ +D D++ AAD GI G+ C
Sbjct: 240 TGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 296
Query: 305 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 364
A V + +Y + +++ ++ + VGDP DP V GP + D +++ IE +
Sbjct: 297 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 356
Query: 365 GATLLTGGKPIGKKGYYIEP-TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN 423
G +L GG+ +G + +DM++ K E+F PV + ++ K +++AI+ AN
Sbjct: 357 GGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANG 416
Query: 424 TRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLES 482
YGL A + +D+ R + G I+IN P+GG K SG R+ +
Sbjct: 417 RPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYA 476
Query: 483 LHNYLQVKSVV 493
+ K++V
Sbjct: 477 VEAVTAYKTIV 487
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 296 bits (757), Expect = 4e-96
Identities = 114/439 (25%), Positives = 181/439 (41%), Gaps = 19/439 (4%)
Query: 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
+ VK AR+AF+ S R + +I E+ + ++ A D GK +
Sbjct: 2 ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59
Query: 121 GDIPGAANTLRYYAGAADKI-HGEVLKMSRALQG---YTLREPIGVVGHIIPWNFPTTMF 176
++ L E + +R Q Y EP+GVV I WN+P +
Sbjct: 60 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119
Query: 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH 236
+ A+AAG +I+KP+E + +A A L + G
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIP---QYMDQNLYLVVKGGVPETTELLK 176
Query: 237 MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 296
D + +TGST VG+ VM AAA +L PV+LELGGKSP + D D++ A G
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235
Query: 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 356
N G+ CVA + I ++ +KL + K G+ + G ++ + F R+
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKG 294
Query: 357 YIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 416
I++ K YI PTI +V + + EIFGPVM ++ +++EE
Sbjct: 295 LIDNQKVAHGGTWDQS------SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEE 348
Query: 417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGF 474
AI+ N LA + + + V + +G + N P+GG SG
Sbjct: 349 AIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGM 408
Query: 475 GRDCGLESLHNYLQVKSVV 493
G G +S + +S +
Sbjct: 409 GAYHGKKSFETFSHRRSCL 427
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 200 bits (509), Expect = 6e-59
Identities = 82/488 (16%), Positives = 149/488 (30%), Gaps = 43/488 (8%)
Query: 35 SGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93
+ F + TGEA+ + +V+ A AA + + R + ++R ++ A
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58
Query: 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM------ 147
+E ++ + L+ G+I AN LR +A + +
Sbjct: 59 SELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117
Query: 148 ---SRALQGYTLREPIGVVGHIIPWNFPTT--MFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ +G V NFP + ALAAGC +IVK P +
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177
Query: 203 LYFAHLAKLAG----VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
A + A +P + ++ G G A+ SH +I V FTGS GR + A
Sbjct: 178 QIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL---LGILFNKGEICVASSRVYVQEGI 315
G + AD+A + G+ C V+
Sbjct: 238 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 297
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 375
+ + + + + I+ +
Sbjct: 298 ETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS---------QAE 348
Query: 376 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT- 434
+ + EIFGP ++ + V + + + L A I
Sbjct: 349 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHAT 408
Query: 435 -KDLNVANTVSRSIR--AGIIWINCY-------FAFDSDCPYGGYKMSGFGRDCGLESLH 484
+D + + + AG + N + +A PY S G E++H
Sbjct: 409 EEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VGAEAIH 467
Query: 485 NYLQVKSV 492
+L+ +
Sbjct: 468 RWLRPVAY 475
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 176 bits (446), Expect = 1e-50
Identities = 63/451 (13%), Positives = 127/451 (28%), Gaps = 61/451 (13%)
Query: 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
+++ K R+A+D + E+ + K A+ ++E + + +D K
Sbjct: 1 DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58
Query: 119 K-----------MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHII 167
I G D + + R R + + I
Sbjct: 59 VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118
Query: 168 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF-G 226
+ + AL +G T++++ + A + F
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178
Query: 227 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNT 286
T + + + + + G ++ + PV G + + + D+
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238
Query: 287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
A + + G A + ++ I EF +VE+ + V R+
Sbjct: 239 AVPVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRGCEKTRE---- 293
Query: 347 DKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 406
I P + +D E ++
Sbjct: 294 -----------------------------------IVPDVVPATEDDW---PTEYLDLII 315
Query: 407 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPY 466
A+ K V+EAI+ G + I+T++ + A I A +++N F +
Sbjct: 316 AIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQF 375
Query: 467 GGYKMSGFGRD----CGLESLHNYLQVKSVV 493
G G G L K VV
Sbjct: 376 GFGAEIGISTQRFHARGPVGLRELTTYKFVV 406
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 94.1 bits (233), Expect = 2e-21
Identities = 56/422 (13%), Positives = 122/422 (28%), Gaps = 53/422 (12%)
Query: 65 VKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALD---AGKLHSWAKMG 121
K AR+A + S R I+ K D ++ +A + +D A + +
Sbjct: 9 AKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLL 66
Query: 122 D---------IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLRE-PIGVVGHIIPWNF 171
++ A D + G+V G TL + V ++ +
Sbjct: 67 KRLDLFKGDKFEVMLQGIKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVIFES 125
Query: 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK------LAGVPDGVLNVVPGF 225
+ + ++ +G I+K +++ A + + V +V
Sbjct: 126 RPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE 185
Query: 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285
+ + + + +++ + PV G + + +D D+
Sbjct: 186 TRQDVSDLLDQDEYIDLVVPRG---SNALVRKIKDTTKIPVLGHADGICSIYLDEDADLI 242
Query: 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
A ++L + + +E + V +
Sbjct: 243 KAKRISLDAKTNYPAGCNAMETLLIN-PKFSKWWEVLENLTLEGGV-------TIHATKD 294
Query: 346 VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 405
+ FD++ E GK A T+ + +D E
Sbjct: 295 LKTAYFDKL---NELGKLTEA--------------IQCKTVDADEEQDF---DKEFLSLD 334
Query: 406 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCP 465
+A + E AI+ N I+T++ A + + + ++ N F
Sbjct: 335 LAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFR 394
Query: 466 YG 467
YG
Sbjct: 395 YG 396
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 502 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.09 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=2e-106 Score=849.53 Aligned_cols=487 Identities=54% Similarity=0.930 Sum_probs=462.4
Q ss_pred ccCCCCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHH
Q 010735 12 SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIML 90 (502)
Q Consensus 12 ~~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~ 90 (502)
.+....+. ..++||||+|+++.++++++++||+||+++++++.++.+|+++||++|++||+.+ .|+.++.++|.++|+
T Consensus 5 ~~~~~~~~-~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~ 83 (494)
T d1bxsa_ 5 PLTNLQFK-YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLN 83 (494)
T ss_dssp CCSSCCCC-CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHH
T ss_pred CCCCCCcC-cCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHH
Confidence 34444433 4489999999998888999999999999999999999999999999999999621 499999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCC
Q 010735 91 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN 170 (502)
Q Consensus 91 ~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 170 (502)
+++++|++|+++|++++++|+|||..+....|+..+++.+++++.+.++..+...+...+...++.++|+|||++|+|||
T Consensus 84 kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 163 (494)
T d1bxsa_ 84 KLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWN 163 (494)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCcc
Confidence 99999999999999999999999999876778999999999999999888777777666677889999999999999999
Q ss_pred hhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHH
Q 010735 171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250 (502)
Q Consensus 171 ~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~ 250 (502)
||+..+++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+++++++.|+.||+||+|.||||+.+
T Consensus 164 ~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~ 243 (494)
T d1bxsa_ 164 FPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEV 243 (494)
T ss_dssp SHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHH
T ss_pred chhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHH
Confidence 99999999999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (502)
Q Consensus 251 g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (502)
|+.|++.++...+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 244 g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~ 323 (494)
T d1bxsa_ 244 GKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 323 (494)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhhe
Confidence 99999988755789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEE
Q 010735 331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (502)
Q Consensus 331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 410 (502)
++|+|.++++++||++++.+++++.+++++|+++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 ~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~ 403 (494)
T d1bxsa_ 324 VLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMK 403 (494)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred eeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEE
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 411 FKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 411 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|
T Consensus 404 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k 483 (494)
T d1bxsa_ 404 FKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 483 (494)
T ss_dssp ECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred ECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceE
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred EEEEecCCC
Q 010735 491 SVVTPIFNS 499 (502)
Q Consensus 491 ~v~~~~~~~ 499 (502)
+|++++.+.
T Consensus 484 ~i~~~~~~~ 492 (494)
T d1bxsa_ 484 TVTIKISQK 492 (494)
T ss_dssp EEEEECSCC
T ss_pred EEEEecCCC
Confidence 999998753
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=2.9e-105 Score=840.11 Aligned_cols=480 Identities=53% Similarity=0.887 Sum_probs=459.1
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
....++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.+ .|++++.++|.++|+++++.|+
T Consensus 11 ~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~ 90 (494)
T d1o04a_ 11 VFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE 90 (494)
T ss_dssp CCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHH
Confidence 344589999999998889999999999999999999999999999999999998621 4999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+|+++|++++++|+|||..++...|+..+++.+++++.+.++..++..+...+...+++++|+|||++|+|||||+...+
T Consensus 91 ~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~ 170 (494)
T d1o04a_ 91 RDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 170 (494)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHHHH
Confidence 99999999999999999998767899999999999999998887777766666678899999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|+++++++.|+.||+|+.|.||||+++|+.|++.
T Consensus 171 ~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~ 250 (494)
T d1o04a_ 171 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVA 250 (494)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999988
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++.+++|+|.+
T Consensus 251 aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~ 330 (494)
T d1o04a_ 251 AGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFD 330 (494)
T ss_dssp HHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTS
T ss_pred hhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCccc
Confidence 76578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
+++++|||+++.+++++.+++++|+++|+++++||....++|+|++|||+.++++++++++||+||||++|++|+|++||
T Consensus 331 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~ea 410 (494)
T d1o04a_ 331 SKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEV 410 (494)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred ccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999887778999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
|+++|+++|||++||||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+|+++||+.|+|+++++
T Consensus 411 i~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~p 490 (494)
T d1o04a_ 411 VGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 490 (494)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred HHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeCC
Confidence 99999999999999999999999999999999999999988888899999999999999999999999999999999876
Q ss_pred C
Q 010735 498 N 498 (502)
Q Consensus 498 ~ 498 (502)
.
T Consensus 491 ~ 491 (494)
T d1o04a_ 491 Q 491 (494)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.5e-102 Score=820.02 Aligned_cols=478 Identities=38% Similarity=0.695 Sum_probs=453.6
Q ss_pred cccceeEcCeEeeCCCCCeE-EeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTF-ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~-~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
....+||||+|+++.++.++ +++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|++
T Consensus 18 ~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~a~~L~~ 95 (503)
T d1a4sa_ 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 34468999999998766655 6999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
|+++|++++++|+|||+.++ ..|+..+++.+++++.+.++..+.......+...++.++|+|||++|+|||||+...++
T Consensus 96 ~~eela~~~~~etGkp~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~ 174 (503)
T d1a4sa_ 96 RRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHhhhhcchhh-hhhhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCChHHHHHH
Confidence 99999999999999999975 67999999999999999888776666555667789999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|++ +.++++.|+.||+||+|.||||+++|+.|++.+
T Consensus 175 ~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~a 253 (503)
T d1a4sa_ 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 568999999999999999999999999999998
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|+++|.+.++++++|+|.++
T Consensus 254 a-~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~ 332 (503)
T d1a4sa_ 254 A-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp H-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred h-hcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeecccccc
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC------CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
.+++||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|+
T Consensus 333 ~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~ 412 (503)
T d1a4sa_ 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcC
Confidence 99999999999999999999999999999999997532 378999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|
T Consensus 413 ~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v 492 (503)
T d1a4sa_ 413 TEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTV 492 (503)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEE
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeEEE
Confidence 99999999999999999999999999999999999999999999888788999999999999999999999999999999
Q ss_pred EEecC-CCCCC
Q 010735 493 VTPIF-NSPWL 502 (502)
Q Consensus 493 ~~~~~-~~~~~ 502 (502)
+++++ -..||
T Consensus 493 ~~~~~~~~~~f 503 (503)
T d1a4sa_ 493 IVEMGDVDSLF 503 (503)
T ss_dssp EECCSCCCCCC
T ss_pred EEcCCCCCCCC
Confidence 99986 34444
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-101 Score=809.20 Aligned_cols=470 Identities=37% Similarity=0.634 Sum_probs=440.2
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+++ ++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|+++++
T Consensus 3 ~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ 79 (474)
T d1wnda_ 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENGQ 79 (474)
T ss_dssp CCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHH
Confidence 578999999986 568999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeee-cccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||+.++...++..+...+++++...........+ ...+...+++++|+|||++|+|||||+...++++
T Consensus 80 ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 159 (474)
T d1wnda_ 80 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 159 (474)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccH
Confidence 999999999999999876666777777777766655443332222 2245678899999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..++++++++ +|+|++|+|+++++++++.|++||+|++|.||||+++|+.|.+.++
T Consensus 160 a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~- 237 (474)
T d1wnda_ 160 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA- 237 (474)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG-
T ss_pred HHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh-
Confidence 99999999999999999999999999999775 9999999999988889999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
.++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 238 ~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~ 317 (474)
T d1wnda_ 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 317 (474)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred cCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
.+||+++..+.+++.+++++++.+|+ .++.|+......|+|+.|||+.++++++++++||+||||++|++|+|+||||+
T Consensus 318 ~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~ 397 (474)
T d1wnda_ 318 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 397 (474)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred eecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999998 46666666666899999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++++
T Consensus 398 ~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 398 WANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp HHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEeC
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999874
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4e-98 Score=789.78 Aligned_cols=470 Identities=31% Similarity=0.556 Sum_probs=436.1
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
+.+++||||+|+.+ +..++++||. ||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++
T Consensus 36 ~~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~ 111 (516)
T d1uzba_ 36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRR 111 (516)
T ss_dssp EEECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 45689999999974 5688999985 7999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec--ccccccceeecCCeEEEEEcCCChhHHhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
+.++|++++++|+|||..++ ..|+..+++.+++++..+....+..... ..+...+..++|+|||++|+|||||+..+
T Consensus 112 ~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~ 190 (516)
T d1uzba_ 112 RKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF 190 (516)
T ss_dssp THHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHhCCCcccc-chhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccc
Confidence 99999999999999999975 6799999999999998887655432221 23456678899999999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+++++++.|+.||+|++|.||||+.+|+.|++
T Consensus 191 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~ 270 (516)
T d1uzba_ 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270 (516)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred cccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHh-----cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735 257 AAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (502)
Q Consensus 257 ~aa-----~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (502)
.++ ..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++++.+++++++
T Consensus 271 ~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~ 350 (516)
T d1uzba_ 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350 (516)
T ss_dssp HHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcc
Confidence 875 246899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEe
Q 010735 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (502)
Q Consensus 332 ~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 411 (502)
+| |.++++++||+++..+++++.+++++++.+|+.+ +||...+.+|+|+.|||+.++++++++++||+||||++|++|
T Consensus 351 ~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~ 428 (516)
T d1uzba_ 351 VG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428 (516)
T ss_dssp BS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred cC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEe
Confidence 99 5678899999999999999999999999999765 566665568999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcch-HHHHHhhhh
Q 010735 412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCG-LESLHNYLQ 488 (502)
Q Consensus 412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g-~~~~~~~~~ 488 (502)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++| .+++++|++
T Consensus 429 ~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~ 508 (516)
T d1uzba_ 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508 (516)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEE
T ss_pred CCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999754 35789999999999999765 799999999
Q ss_pred ccEEEEec
Q 010735 489 VKSVVTPI 496 (502)
Q Consensus 489 ~k~v~~~~ 496 (502)
.|+|+.+|
T Consensus 509 ~k~v~~r~ 516 (516)
T d1uzba_ 509 MKAVAERF 516 (516)
T ss_dssp EEEEEEEC
T ss_pred eeeEEEcC
Confidence 99998764
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=7.3e-93 Score=747.52 Aligned_cols=473 Identities=29% Similarity=0.472 Sum_probs=434.7
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
++.+++||||+|+. ++++++++||+||+.+++++.++.+|+++|+++|+++++. .|+.+|.++|.++|++++++|++
T Consensus 14 ~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~a~~l~~ 90 (499)
T d1ky8a_ 14 VPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIER 90 (499)
T ss_dssp EEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHHHHHHHH
Confidence 55688999999996 5789999999999999999999999999999999877662 59999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhH
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPT 173 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (502)
+.++|++++++|+|||..++ ..|+.++++.+++++...++..+...... .+...+++++|+|||++|+|||||+
T Consensus 91 ~~~~la~~~~~etGk~~~~a-~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~ 169 (499)
T d1ky8a_ 91 NLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPL 169 (499)
T ss_dssp THHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHH
T ss_pred hHHHHHHHHHHHhCCCHHHH-hhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccc
Confidence 99999999999999999975 67999999999999988877665433221 2345678999999999999999999
Q ss_pred HhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 174 ~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
..+++++++||++||+||+|||+.+|.++..+++++.++|+|+++++++.+++ +.+..|+.|++++.+.||||...++.
T Consensus 170 ~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~ 248 (499)
T d1ky8a_ 170 FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGER 248 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHH
T ss_pred hhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceE
Confidence 99999999999999999999999999999999999999999999999999865 46788999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
+.+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 249 i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G 325 (499)
T d1ky8a_ 249 VVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG 325 (499)
T ss_dssp HHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred Eeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccC
Confidence 998754 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEe---eCCCCCcccccceeeceEEEEE
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT---NVTEDMLIAKNEIFGPVMALMK 410 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~---~~~~~~~~~~~E~fgPvl~v~~ 410 (502)
+|.++++++||+++.++++++++++++|+.+|++++.||.... ..+..++++. ++++||++++||+||||++|++
T Consensus 326 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~ 403 (499)
T d1ky8a_ 326 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVE 403 (499)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCceEEEEE
Confidence 9999999999999999999999999999999999999998653 3344444443 4567999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhc
Q 010735 411 FKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQV 489 (502)
Q Consensus 411 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~ 489 (502)
|+|.+||++++|+++|||++||||+|.++++++++++++|+|+||+++... +.+||||+|.||+|+++|.+|+++|++.
T Consensus 404 ~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 483 (499)
T d1ky8a_ 404 VKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAY 483 (499)
T ss_dssp ESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEE
T ss_pred cCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCE
Confidence 999999999999999999999999999999999999999999999987644 7899999999999999999999999999
Q ss_pred cEEEEecCC-CCC
Q 010735 490 KSVVTPIFN-SPW 501 (502)
Q Consensus 490 k~v~~~~~~-~~~ 501 (502)
|+|++++.+ ..|
T Consensus 484 k~i~~~~~~~~~~ 496 (499)
T d1ky8a_ 484 KTIVFNYKGKGVW 496 (499)
T ss_dssp EEEEEECTTSSSC
T ss_pred EEEEEcCCCCCCC
Confidence 999999764 444
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=3.9e-90 Score=724.23 Aligned_cols=465 Identities=32% Similarity=0.502 Sum_probs=431.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
+.+++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++|++ .|+++|.++|.++|++++++|.++
T Consensus 2 k~~~n~I~G~~~~--~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~ 77 (474)
T d1euha_ 2 KQYKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 77 (474)
T ss_dssp CBCCEEETTEEEC--CSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceecCeecC--CCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 4568999999987 467999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeee------cccccccceeecCCeEEEEEcCCChhH
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPT 173 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (502)
.++|++++++|+|||..++ ..|+...+..++++............. ...+...+++++|+|||++|+|||||+
T Consensus 78 ~~~la~~~~~e~Gk~~~~a-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~ 156 (474)
T d1euha_ 78 KEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156 (474)
T ss_dssp HHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCcchh-ccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence 9999999999999999964 679999999999888766543322111 113344678899999999999999999
Q ss_pred HhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 174 ~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
...++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|++++++.++++.|+.||+|+.|.||||..+++.
T Consensus 157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~ 236 (474)
T d1euha_ 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 236 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++++|++.++++...++.|
T Consensus 237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 998854 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
++.+. ..++|++...+.+++.+.+..+...++..+.++.. .|+|+.|||+..++++|++++||+||||++|++|+|
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 389 (474)
T d1euha_ 314 NPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 389 (474)
T ss_dssp CGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred Ccccc-cccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCC
Confidence 98865 46899999999999999999999999887765543 789999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|
T Consensus 390 ~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 469 (474)
T d1euha_ 390 VEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 469 (474)
T ss_dssp HHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEE
Confidence 9999999999999999999999999999999999999999999765 457899999999999999999999999999999
Q ss_pred EEec
Q 010735 493 VTPI 496 (502)
Q Consensus 493 ~~~~ 496 (502)
+++.
T Consensus 470 ~~~~ 473 (474)
T d1euha_ 470 VFDI 473 (474)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9875
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-84 Score=674.49 Aligned_cols=423 Identities=27% Similarity=0.386 Sum_probs=384.2
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010735 61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140 (502)
Q Consensus 61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~ 140 (502)
|++||++||+||+ .|+.+|.++|.++|++++++|++|+++|++++++|+|||..++...|+..+++.+++++......
T Consensus 2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~ 79 (446)
T d1ad3a_ 2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW 79 (446)
T ss_dssp HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999999 89999999999999999999999999999999999999999877789999999999888766543
Q ss_pred cCee-ee---cccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCC
Q 010735 141 HGEV-LK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216 (502)
Q Consensus 141 ~~~~-~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~ 216 (502)
.... .. ...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+. +|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~ 158 (446)
T d1ad3a_ 80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQ 158 (446)
T ss_dssp HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCT
T ss_pred hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccc
Confidence 3221 11 123445678899999999999999999999999999999999999999999999999999998775 899
Q ss_pred ceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHh
Q 010735 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 296 (502)
Q Consensus 217 g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~ 296 (502)
++++++.+.+.. ...+ .++++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 159 ~~~~~~~~~~~~-~~~~-~~~~~~~v~fTGs~~~G~~i~~~aa-~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 159 NLYLVVKGGVPE-TTEL-LKERFDHIMYTGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp TTEEECCCSHHH-HHHH-TTSCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccccchh-hhhh-cccccCceEEECcHHHHHHHHHHHH-hcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 999999986544 3444 4568999999999999999999987 889999999999999999999999999999999999
Q ss_pred ccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 010735 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 376 (502)
Q Consensus 297 ~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 376 (502)
.|+||.|++++|||||++++|+|+++|.+.++.+ +|++.++++++||++++.+++++..++++ ++...|+...
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~~- 308 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTWD- 308 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCEE-
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceeec-
Confidence 9999999999999999999999999999999887 79999999999999999999999887754 3444444433
Q ss_pred CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcC
Q 010735 377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC 456 (502)
Q Consensus 377 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~ 456 (502)
..+.|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||+
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~ 388 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTAND 388 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESS
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeC
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 457 YFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 457 ~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
++. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 389 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 389 VIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKS 430 (446)
T ss_dssp SSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECC
T ss_pred CccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEcc
Confidence 754 5588999999999999999999999999999998864
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=7.5e-80 Score=647.21 Aligned_cols=439 Identities=21% Similarity=0.295 Sum_probs=374.1
Q ss_pred CCeEEeecCCCCceEE-EEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Q 010735 36 GKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (502)
Q Consensus 36 ~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (502)
+++|+++||+|||.|+ +++.++.+|+++|+++|++||+ .|++++.++|.++|++++++|++|+++|++++++|+|||
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp 79 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 79 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999997 7999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec---------ccccccceeecCCeEEEEEcCCChhHHhh--hhhHHHH
Q 010735 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM---------SRALQGYTLREPIGVVGHIIPWNFPTTMF--FMKVSPA 183 (502)
Q Consensus 115 ~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~~A 183 (502)
..++ ..|+..+++.+++++++.++........ ......+..+.|+|||++|+|||||+... .+++++|
T Consensus 80 ~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~A 158 (504)
T d1ez0a_ 80 EVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 158 (504)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHH
Confidence 9975 6799999999999998876543321110 12345667888999999999999999654 4689999
Q ss_pred HHcCCeEEEecCCCcHHHHHHHHH----HHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 184 LAAGCTMIVKPAEQTPLIALYFAH----LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l~~----~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
|++||+||+|||+.+|.++.++.+ ++.++|+|+|++|+|+|++.++++.|+.||+|++|.||||+.+|+.|.+.++
T Consensus 159 LaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa 238 (504)
T d1ez0a_ 159 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 238 (504)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhh
Confidence 999999999999999999877654 4567799999999999988889999999999999999999999999999987
Q ss_pred cCCCCce--EEecCCCCceEEccCCCHHHHH--HHHHHHHhccCCCCcCCCcEEEEecccH-HHHHHHHHHHHhccccCC
Q 010735 260 TSNLKPV--SLELGGKSPLLIFDDVDVNTAA--DMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGD 334 (502)
Q Consensus 260 ~~~~~~~--~~e~gG~~~~iV~~dadl~~aa--~~iv~~~~~~~Gq~C~s~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~ 334 (502)
..++|+ ++|+|||||+||++|||++.|+ +.++.++|.|+||.|++++|+||+++.+ +.|++.+++.++. +
T Consensus 239 -~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~- 313 (504)
T d1ez0a_ 239 -ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q- 313 (504)
T ss_dssp -HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C-
T ss_pred -cccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c-
Confidence 667664 5599999999999999999875 4789999999999999999999887765 4677777665553 2
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEe---eCCCCCcccccceeeceEEEEEe
Q 010735 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT---NVTEDMLIAKNEIFGPVMALMKF 411 (502)
Q Consensus 335 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~---~~~~~~~~~~~E~fgPvl~v~~~ 411 (502)
++++.+||+++..+++++ ++.+...|+++..||.. +.+..|+++. ++..++++++||+||||++|++|
T Consensus 314 --~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~ 384 (504)
T d1ez0a_ 314 --SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 384 (504)
T ss_dssp --CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred --ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeeec
Confidence 457889999998887765 56677788898888763 4444555543 33457889999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhhcc--eeEEEEcCcCC---CC----CCCCcCCCCCCCCCCcchH
Q 010735 412 KTVEEAIKSANNTRYGLAAGIMTK--DLNVANTVSRSIR--AGIIWINCYFA---FD----SDCPYGGYKMSGFGRDCGL 480 (502)
Q Consensus 412 ~~~~eai~~~n~~~~gl~~~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~---~~----~~~pfgG~~~SG~g~~~g~ 480 (502)
+|+||||+++|+++|||+++|||+ |..++.+++++|+ +|+|+||++++ .. .+.||||.+.||.| ..|.
T Consensus 385 ~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~ 463 (504)
T d1ez0a_ 385 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGA 463 (504)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSG
T ss_pred CCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchH
Confidence 999999999999999999999996 5568899999996 89999999754 11 24588888999955 4689
Q ss_pred HHHHhhhhccEE
Q 010735 481 ESLHNYLQVKSV 492 (502)
Q Consensus 481 ~~~~~~~~~k~v 492 (502)
+++++|+++.++
T Consensus 464 ~~i~~f~r~v~~ 475 (504)
T d1ez0a_ 464 EAIHRWLRPVAY 475 (504)
T ss_dssp GGGGGGEEEEEE
T ss_pred HHHHHHhchhhh
Confidence 999999987543
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=7.3e-64 Score=514.88 Aligned_cols=389 Identities=17% Similarity=0.153 Sum_probs=311.7
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhcc------------HHHH
Q 010735 59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD------------IPGA 126 (502)
Q Consensus 59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e------------v~~~ 126 (502)
+|+.+++++|++||+ .|+.+|..+|.++|++++++|++|+++|++++++|+||+..++ ..| +..+
T Consensus 1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~-~~e~~~~rl~~~~~~i~~~ 77 (414)
T d1o20a_ 1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG-VKESLVDRLALNDKRIDEM 77 (414)
T ss_dssp CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcc-ccHHHHHHHhccHHHHHHH
Confidence 478999999999999 8999999999999999999999999999999999999998853 344 5567
Q ss_pred HHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHH
Q 010735 127 ANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 206 (502)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~ 206 (502)
++.+++++.......+..............+.|+|+++++.|||||+...++++++||++||+||+|||+.+|.++..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~ 157 (414)
T d1o20a_ 78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV 157 (414)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence 77888887766555554444334456678889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC-ceEEccC
Q 010735 207 HLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS-PLLIFDD 281 (502)
Q Consensus 207 ~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~-~~iV~~d 281 (502)
+++.++ |+|.++++.+.+.+.+....+..++.+ .|+|++..+..+.+.++ ...+++++|+||+| ++||++|
T Consensus 158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~a~-~~~~~~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 158 SAIREALKETEIPESSVEFIENTDRSLVLEMIRLREY---LSLVIPRGGYGLISFVR-DNATVPVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTT---CSEEEECSCHHHHHHHH-HHCSSCBCCCCCCCEEEEECTT
T ss_pred hHHHhhhhhccccccccccccccchhhhhhccccccc---CeEEEcccHHHHHHHhh-hccccceecccCCCCCeecccc
Confidence 998777 455555777776555555565554443 33344444445555544 44567777777655 6889999
Q ss_pred CCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 010735 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG 361 (502)
Q Consensus 282 adl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a 361 (502)
||++.|++.++.++|.| ||.|++++|++||+++||+|+++|.+...+..++.+.++ ...
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~----------~~~---------- 292 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE----------KTR---------- 292 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECH----------HHH----------
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccch----------hhh----------
Confidence 99999999999999877 999999999999999999999999999887655443221 100
Q ss_pred HHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 010735 362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441 (502)
Q Consensus 362 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~ 441 (502)
.+.+.+. ....+.+++|+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 293 -------------------~~~~~~~---~~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~ 350 (414)
T d1o20a_ 293 -------------------EIVPDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 350 (414)
T ss_dssp -------------------HHSTTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred -------------------hhcccce---ecccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHH
Confidence 0001111 112345689999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC--Cc--chHHHHHhhhhccEEEEecC
Q 010735 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG--RD--CGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 442 ~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g--~~--~g~~~~~~~~~~k~v~~~~~ 497 (502)
++++++++|.|+||+++.+....|||+.|.+|+| +. +|++|+++|++.|+|+.+.+
T Consensus 351 ~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~ 410 (414)
T d1o20a_ 351 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 410 (414)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCC
Confidence 9999999999999998766666677766667653 33 38999999999999987755
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.7e-53 Score=434.80 Aligned_cols=401 Identities=17% Similarity=0.159 Sum_probs=285.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH------HHhCCCHHHHh---h--c-cHHHHH
Q 010735 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEA------LDAGKLHSWAK---M--G-DIPGAA 127 (502)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~------~e~Gk~~~~~~---~--~-ev~~~~ 127 (502)
.++++++.||+|++ .|+.++.++|.++|+++++.|++|.++|+++.. ++.|++...-. . . .+...+
T Consensus 4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence 46788999999999 899999999999999999999999999988644 44565533110 0 1 144455
Q ss_pred HHHHHHHHhhhhhcCeee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHH
Q 010735 128 NTLRYYAGAADKIHGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204 (502)
Q Consensus 128 ~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~ 204 (502)
+.++..+...+.. +... ..+.+...+..+.|+|||++| |+++| ..++.+.++||++||+||+||++.++.|+..
T Consensus 82 ~~l~~i~~~~dpv-g~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~ 158 (436)
T d1vlua_ 82 QGIKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFRE 158 (436)
T ss_dssp HHHHHHHHSCCSS-SCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHhccccc-eeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHH
Confidence 5666555544332 2221 223566778889999999998 56667 5667788999999999999999999999988
Q ss_pred HHHHH--------HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCce
Q 010735 205 FAHLA--------KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276 (502)
Q Consensus 205 l~~~l--------~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~ 276 (502)
+.+++ .++|+|+++++++++ ..++++.|..|++||+|+||||...++.+.+.+ .+|++.++||++|+
T Consensus 159 l~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~----~~pvi~~~~G~~~~ 233 (436)
T d1vlua_ 159 MAKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSI 233 (436)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEE
T ss_pred HHHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeeccc----cceEEEecCCccce
Confidence 87765 467999999999987 456789999999999999999999888876653 36999999999999
Q ss_pred EEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHH
Q 010735 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS 356 (502)
Q Consensus 277 iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~ 356 (502)
||++|||++.|++.++.++|.++|| |++.++++||+++++.|...+....+. |- .+. .++... .
T Consensus 234 ~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv------~l~--~~~~~~----~ 297 (436)
T d1vlua_ 234 YLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---GV------TIH--ATKDLK----T 297 (436)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---CC------CBE--ECHHHH----H
T ss_pred eecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---Cc------EEE--eCHHHH----H
Confidence 9999999999999999999999996 889999999999998886555444433 10 010 112222 2
Q ss_pred HHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735 357 YIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436 (502)
Q Consensus 357 ~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d 436 (502)
...+..... |.. .+....|++....+. .+.+|.|+|+++|++|+|+||||+++|+.++||+++|||+|
T Consensus 298 ~~~~~~~~~------~~~---~~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d 365 (436)
T d1vlua_ 298 AYFDKLNEL------GKL---TEAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTEN 365 (436)
T ss_dssp HHHHHHHHH------TCC---CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSC
T ss_pred Hhhhhhhhc------ccc---cccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECC
Confidence 222211111 110 122233333322222 36799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCC----CCCCCcchHHHHHhhhhccEEEEecCC
Q 010735 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKM----SGFGRDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 437 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~----SG~g~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
.+.+++|++++++|.|+||.++.+..+.+||--.+ ++..+.+||.|++++|..|++....++
T Consensus 366 ~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g~ 431 (436)
T d1vlua_ 366 KANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDGQ 431 (436)
T ss_dssp HHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECSSC
T ss_pred HHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECCCE
Confidence 99999999999999999999988887777762222 234456899999999999999876553
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.09 E-value=0.63 Score=44.21 Aligned_cols=324 Identities=17% Similarity=0.174 Sum_probs=180.0
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH---HhhccHHHH---------------HHHHHHHHHhhhhhcC
Q 010735 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW---AKMGDIPGA---------------ANTLRYYAGAADKIHG 142 (502)
Q Consensus 81 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~---~~~~ev~~~---------------~~~l~~~~~~~~~~~~ 142 (502)
..++..+..+++.+.++.+.|.-+...++...+-... ....|+..+ .+.++.|...... ..
T Consensus 25 ~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~-~~ 103 (431)
T d1k75a_ 25 ASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKL-PP 103 (431)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCC-CC
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcC-CC
Confidence 3444556666777777777776665556554321100 011133322 2223322221110 11
Q ss_pred eeeecccccccceeecCCeEEEEEcCCC---hhHHhhhhhHHHHHHcCCeE--EEecCCCcHHHHHHHHHHHHHcCCCCc
Q 010735 143 EVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTM--IVKPAEQTPLIALYFAHLAKLAGVPDG 217 (502)
Q Consensus 143 ~~~~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~i~~ALaaGN~v--v~kps~~~~~~~~~l~~~l~~aGlP~g 217 (502)
.......|.....++.|+--|+++.|.- ||-.. +...+||-.+|..= +.-|+...|.+ .-....+|+.+
T Consensus 104 ~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsv-LM~aiPAkvAGV~~Ivv~tPp~~~~~~----l~aa~~~Gv~~- 177 (431)
T d1k75a_ 104 VDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPPIADEI----LYAAQLCGVQD- 177 (431)
T ss_dssp EEEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHH-HHHHHHHHHHTCSEEEEEECSSCCHHH----HHHHHHTTCCE-
T ss_pred ceeeccCCceeeeeeeehhhheeeccCCCccchHHH-HHHHHHHHhcCCCceeEEeCCCCcchH----HHHHHHcCccc-
Confidence 1122235566778888999999999964 55544 44578999999764 45665555532 23335566543
Q ss_pred eEEEecCCchhHHHHHHh----CCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEE-ecCCCCc--eEEccCCCHHHHHHH
Q 010735 218 VLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL-ELGGKSP--LLIFDDVDVNTAADM 290 (502)
Q Consensus 218 ~~~~v~g~~~~~~~~l~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~-e~gG~~~--~iV~~dadl~~aa~~ 290 (502)
+--+ | |...-.+|.- -|.||.|+=.|+.-+..+=..... ... .+-. -+.|-+= +|-++++|.+.++..
T Consensus 178 -iy~~-G-GaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g-~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaD 252 (431)
T d1k75a_ 178 -VFNV-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLD-GAAIDMPAGPSEVLVIADSGATPDFVASD 252 (431)
T ss_dssp -EEEC-C-HHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHH-STT-SCEESCCCCCCEEEEEECTTSCHHHHHHH
T ss_pred -eEec-C-ChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcc-cCC-ccccccccCCceEEEEecCCCCHHHHHHH
Confidence 2222 3 4444455543 577999998888776554222221 111 1111 1233333 445678899999988
Q ss_pred HHHHHhccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE
Q 010735 291 ALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (502)
Q Consensus 291 iv~~~~~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 368 (502)
++.-+=.... .+-++|..+ ..+++.+.+.++++.+. . .+ ..+....
T Consensus 253 llaQAEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~-------r--------~~-------i~~~s~~----- 300 (431)
T d1k75a_ 253 LLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAELP-------R--------AE-------TARQALN----- 300 (431)
T ss_dssp HHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS-------S--------CH-------HHHHHHT-----
T ss_pred HHhccCCccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch-------H--------HH-------HHHhhhc-----
Confidence 8866544433 334666544 34555555555555431 0 00 0111110
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-
Q 010735 369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI- 447 (502)
Q Consensus 369 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l- 447 (502)
-. .++.++|++||++++|..-. -...|.++|+. ++..++
T Consensus 301 --------------------------------~~----~ii~v~~~~ea~~~~N~~AP-EHL~l~~~~~~---~~~~~i~ 340 (431)
T d1k75a_ 301 --------------------------------AS----RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSIT 340 (431)
T ss_dssp --------------------------------TC----EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCC
T ss_pred --------------------------------cc----eEEEecCHHHHHHHHHhhhH-HHHHHHhcCHH---HHHhhhh
Confidence 01 24457999999999998432 35788888875 456666
Q ss_pred ceeEEEEcCcCC---------CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 448 RAGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 448 ~~g~v~iN~~~~---------~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
.+|.|++..++. .+.-+|-| |.+|+.+.-+...|++..++.
T Consensus 341 nAGsIflG~~sp~a~GDY~aGpnHvLPT~-----G~Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 341 SAGSVFLGDWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp CCSEEEESTTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCCCGGGGEEEEEEE
T ss_pred hcchhhcCCCCcchhhccccCCCccCCCC-----CceeecCCCCHHHeeeeeeEE
Confidence 689999998754 12334554 456666666788888876654
|