Citrus Sinensis ID: 010855

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
Protein Sequence
MSIFSKPSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAEIHAFILGP
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHHHHcccccccccccHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHcccccccEEEEccEEEEccEEEcEEEEEEccHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHccEEEEEcccHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccEEEEEEccccccHHcHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHEEccccHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHcccccccEEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHcccEEEEcccHHHHHHHHHccccEEccHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHccc
Coil and Loop (DISEMBL)
msifskpslshdeeDKLAIRKLRKRVKQKLKTLDSLVREWGfelpeeiitddatvkCTDFLlstasgkvegekvlgkietPFEKIKVAAYTLSAISPCMRLFEVIAKEIQAllnpddgshlyKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFfaaqpvkqqttvplswvkdpveghltlfcdfdwtctafdssSILAELAIVTAqksdpdqsegkltwmssadlRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFeknensrvvqsgvlkglnlEDIKWASQHLIFQDGCRRFFQNtikstnfktdvhvLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKdhsndeqnltvyiggspGDLLCLLEADIgivigsssslrrlgdhfgvsfVPLFSSLVERQKElvdgssykwkrlpgtlytvsSWAEIHAFILGP
Flexible Loop (DISEMBL)
msifskpslshdeedkLAIRKLRKRVKQKLKTLDSLVREWGFELpeeiitddatvKCTDFLLstasgkvegekvlgkietpfeKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTaqksdpdqsegkltwmssadlrnTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKElvdgssykwkrlpgtlytvsswAEIHAFILGP
Low Complexity Region (SEG)
MSIFSKPSLSHDEEDKLAIrklrkrvkqklktlDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAEIHAFILGP
Disordered region (IsUnstruct)
*************************VKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTA***********LTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAEIHAFIL**
Disordered Region (DISOPRED)
*SIFS*PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLN*DDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTT******KDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTA**************MSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDG****WKRLPGTLYTVSSWAEIHAFILGP
Disordered Region (DISEMBL)
**************DKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTA**********KLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAEIHAFILGP
Disordered Region (DISPRO)
*SIF*KPSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQK*************SSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAEIHAFILGP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSIFSKPSLSHDEEDKLAxxxxxxxxxxxxxxxxxxxxxWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAEIHAFILGP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	499	2.2.26 [Sep-21-2011]
Q9UUE0	274	UPF0655 protein C17G9.12c	yes	no	0.511	0.930	0.252	2e-08
P44659	215	Uncharacterized protein H	yes	no	0.272	0.632	0.245	0.0005

>sp|Q9UUE0|YNZC_SCHPO UPF0655 protein C17G9.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC17G9.12c PE=3 SV=1

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 54/309 (17%)

Query: 204 DFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQ 263
           DFD T T +D+  +LAE        + P++                W V+S KY +EY  
Sbjct: 6   DFDETITTYDTIHLLAEAV------NKPEE----------------WSVISDKYWQEYLA 43

Query: 264 CIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIF 323
             E++  S  +  +        L    Y E+    R+ +S    GL+   +    Q +  
Sbjct: 44  WREALPHSTTLTSY-----LPLLGGSRYLEEASIKRIEKSQYFSGLSEGALDNIVQLITL 98

Query: 324 QDGCRRFFQNTIKSTNF-KTDVHVLSYCWCGDLI-RSAFASGDLNA--FRVHSNELVYEE 379
           + G   F    +      KT  HVLS  W   +I ++     DL A    VH+N+  ++ 
Sbjct: 99  RAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHANDFDFDT 158

Query: 380 SIST--GEIVNKLESPL-----EKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD 432
           S +T  G I+ +  S L     +K++ F  I++  +       VYIG SP D  CL  + 
Sbjct: 159 STNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGCLQISP 218

Query: 433 IGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYK-WKRLPG--TLYTVSSW 489
           I I++ S+     +   F                +LVD S +   K +PG   +YT S W
Sbjct: 219 ISILMRSNQKYYDILSRF-------------EDVQLVDISEFPVQKAVPGKKIIYTCSDW 265

Query: 490 AEIHAFILG 498
             I    L 
Sbjct: 266 CAIQKAFLA 274

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P44659|Y358_HAEIN Uncharacterized protein HI_0358 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0358 PE=3 SV=1

 Score = 46.6 bits (109), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 23/159 (14%)

Query: 20  RKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKC---TDFLLSTASGKVEGEKVLG 76
           RK  + + Q+++   +  REWG    +EI T   +  C   T +LL           + G
Sbjct: 70  RKTLEILCQEIQLHLNYCREWGIS-EQEIFTTQESAACIAYTRYLLDCG--------MTG 120

Query: 77  KIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQE 136
            +          A   +A++PC   +  +A+ I     P   ++ Y+ WID Y S+ FQ+
Sbjct: 121 SL----------AELYAAVTPCALGYAQVARYITQHY-PRLPNNPYQTWIDTYASEEFQQ 169

Query: 137 SALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
           +A +T + L  L   L   +L  I++++  A ++ + F+
Sbjct: 170 AAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFW 208

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	499
255571178	560	conserved hypothetical protein [Ricinus	0.967	0.862	0.683	0.0
225466287	566	PREDICTED: uncharacterized protein LOC10	0.979	0.863	0.644	0.0
359480059	550	PREDICTED: uncharacterized protein LOC10	0.943	0.856	0.669	0.0
296088278	657	unnamed protein product [Vitis vinifera]	0.975	0.741	0.646	0.0
118486577	618	unknown [Populus trichocarpa]	0.971	0.784	0.648	0.0
224125750	577	predicted protein [Populus trichocarpa]	0.975	0.844	0.650	1e-180
356576723	607	PREDICTED: uncharacterized protein LOC10	0.975	0.802	0.616	1e-175
356535194	604	PREDICTED: uncharacterized protein LOC10	0.975	0.806	0.605	1e-170
297744225	1374	unnamed protein product [Vitis vinifera]	0.887	0.322	0.664	1e-169
224145849	541	predicted protein [Populus trichocarpa]	0.919	0.848	0.616	1e-166

>gi|255571178|ref|XP_002526539.1| conserved hypothetical protein [Ricinus communis] gi|223534100|gb|EEF35817.1| conserved hypothetical protein [Ricinus communis]

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/483 (68%), Positives = 394/483 (81%)

Query: 16  KLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVL 75
           K  IRKLRKRVK  LK   S+VREWGFELP E     AT+K T+FLL+TASGKVE EK  
Sbjct: 77  KSLIRKLRKRVKANLKNYHSIVREWGFELPAENTPIIATIKYTEFLLATASGKVEAEKDP 136

Query: 76  GKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQ 135
           GKI TPFE+IK+AAYTL A++PCMRL   I KEI  LL+PDD SH+Y+KW+D YCS+SF+
Sbjct: 137 GKIATPFERIKLAAYTLGAMAPCMRLHASICKEIHCLLDPDDSSHIYRKWVDNYCSKSFE 196

Query: 136 ESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPV 195
           ESALQ EE+LD+LS+ LT EELEV++KLY +A+KL V+F   QP+ QQT VPLS V+ PV
Sbjct: 197 ESALQIEEVLDRLSISLTSEELEVLEKLYLQAMKLKVDFHCTQPIVQQTIVPLSRVQSPV 256

Query: 196 EGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLST 255
           + ++T+FCDFD TCTA DSS+ILAE+A++TA K D   S+ KLT MSSADLR+TW VLS 
Sbjct: 257 DSYITIFCDFDMTCTAVDSSAILAEIALLTAAKVDLTGSKTKLTRMSSADLRSTWGVLSA 316

Query: 256 KYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIK 315
           +Y EE+++CIESIM SEAV +F Y GLCEAL+QL  FEK  NSRV+QS VLKGL+LEDIK
Sbjct: 317 QYVEEHDRCIESIMPSEAVEKFNYGGLCEALEQLTEFEKRANSRVIQSEVLKGLSLEDIK 376

Query: 316 WASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNEL 375
            A Q ++FQ+GC+ FFQ  I+  N KTDVHVLSYCWCGDLIRSAF+SGDLN  +VHSNEL
Sbjct: 377 RAGQQIVFQEGCKGFFQKIIRDENLKTDVHVLSYCWCGDLIRSAFSSGDLNVLQVHSNEL 436

Query: 376 VYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI 435
           VYEE+ISTGEI+  +E P+EKLQAFND+LK+ + D Q LT+YIGGS GDLLCLL+ADIGI
Sbjct: 437 VYEENISTGEIIRMVECPMEKLQAFNDMLKEQNLDVQQLTIYIGGSVGDLLCLLKADIGI 496

Query: 436 VIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAEIHAF 495
           VIGSS SL+RLGDHFG+SFVPLFS +++RQKEL +G S  WK  PG LYTVSSWAEIHAF
Sbjct: 497 VIGSSPSLKRLGDHFGISFVPLFSGVLKRQKELGEGVSPNWKAPPGVLYTVSSWAEIHAF 556

Query: 496 ILG 498
           ILG
Sbjct: 557 ILG 559

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466287|ref|XP_002270291.1| PREDICTED: uncharacterized protein LOC100266835 [Vitis vinifera]

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/489 (64%), Positives = 388/489 (79%)

Query: 10  SHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKV 69
           + D++ KL I +LRK V ++LK  DS V+EWGF+L +E   + ATVK  DFLL+TASGK+
Sbjct: 77  ADDDDAKLGICQLRKSVLEELKMHDSFVKEWGFDLSKESSLNSATVKYRDFLLATASGKI 136

Query: 70  EGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYY 129
           EG K  GK+ TPFEK KVAAYTL A++PCMRL+  + KE+QALL+P + +H YKKWID Y
Sbjct: 137 EGVKGPGKLATPFEKTKVAAYTLGAMTPCMRLYAFLGKELQALLHPSESTHPYKKWIDNY 196

Query: 130 CSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLS 189
            S+ FQ SALQTE+LLDKLSV LTGEEL++I+KLYY+A+KL + FF AQ + Q T VPL+
Sbjct: 197 SSEGFQGSALQTEDLLDKLSVSLTGEELDIIEKLYYQAMKLEIEFFCAQLLDQYTIVPLT 256

Query: 190 WVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNT 249
              DP    L +F DFD TCT  DSS+ILAE+AI+TA K D +Q E ++  MSSADLRNT
Sbjct: 257 KGHDPAADRLVIFSDFDLTCTVVDSSAILAEIAIITAPKFDQNQPENQIIRMSSADLRNT 316

Query: 250 WDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGL 309
           W VLS +YTEEYEQCIE+I+ SE V EF+YEGLC+AL+QL+ FEK  NSRV++SGVLKGL
Sbjct: 317 WGVLSKQYTEEYEQCIENILPSEKVEEFDYEGLCKALEQLSDFEKRANSRVIESGVLKGL 376

Query: 310 NLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFR 369
           NL+DIK A + LI QDGC  FFQN +K+ +   DVH+LSYCWCGDLIRSAF+SG L+   
Sbjct: 377 NLDDIKRAGERLILQDGCASFFQNIVKNESLIADVHILSYCWCGDLIRSAFSSGGLHVLN 436

Query: 370 VHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLL 429
           VH+NE  ++ESIS GEIV  +ESP++KL+AF +IL++ SND +NLTVYIG S GDLLCLL
Sbjct: 437 VHANEFAFKESISNGEIVKNVESPIDKLKAFLNILENCSNDRKNLTVYIGDSVGDLLCLL 496

Query: 430 EADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSW 489
            AD+GIVIGSSSSL+R+G  FGVSFVPLF  LV++QKE V+GSS +WK L GTLYTVSSW
Sbjct: 497 NADVGIVIGSSSSLKRVGSQFGVSFVPLFRFLVKKQKEYVEGSSSRWKGLSGTLYTVSSW 556

Query: 490 AEIHAFILG 498
           AEIHAFILG
Sbjct: 557 AEIHAFILG 565

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480059|ref|XP_002269886.2| PREDICTED: uncharacterized protein LOC100249779 [Vitis vinifera]

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/481 (66%), Positives = 382/481 (79%), Gaps = 10/481 (2%)

Query: 19  IRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKI 78
           IRK+RK V + L+  D  VR+WGF+LP+EI  + AT K TDFLL+TASGK          
Sbjct: 78  IRKMRKLVIEALRMRDDAVRDWGFDLPKEIPYNSATSKYTDFLLATASGKTA-------- 129

Query: 79  ETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESA 138
            TPFEK KVAAYTL+AI+P MR +  I+ EIQ LL+P+DGSH YKKWID Y SQSF+ SA
Sbjct: 130 -TPFEKTKVAAYTLAAIAPYMRFYAFISNEIQTLLDPNDGSHKYKKWIDSYSSQSFEASA 188

Query: 139 LQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGH 198
           LQ E+LLDKLS+ LTGEELE+++K+Y++A KL V+FF AQPV QQT VPL  V D  + H
Sbjct: 189 LQNEDLLDKLSISLTGEELEILEKVYHQATKLEVDFFYAQPVVQQTIVPLCRVHDHAKYH 248

Query: 199 LTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYT 258
           LT+FCDFD TCT  DSS++LAE+AIVTA K D + SE +L  MSS DL+NTW VLST+YT
Sbjct: 249 LTVFCDFDMTCTPIDSSALLAEIAIVTAPKIDLNASETQLVRMSSTDLKNTWGVLSTQYT 308

Query: 259 EEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWAS 318
           EE E+C+ESI+ SE V +F YEGLC+AL+QL+ FEK  NSRVVQSGVLKGLNLEDIK A 
Sbjct: 309 EELEKCMESIVPSETVEKFNYEGLCKALEQLSDFEKRANSRVVQSGVLKGLNLEDIKRAG 368

Query: 319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYE 378
           Q LI QDGC  FFQ  +K+ N K DV+VLSYCWCGD I+SAF+SGDL   RV+SNEL YE
Sbjct: 369 QGLILQDGCTGFFQKILKNDNLKADVNVLSYCWCGDFIKSAFSSGDLGVVRVYSNELAYE 428

Query: 379 ESISTGEIVNKLESPLEKLQAFNDILKDH-SNDEQNLTVYIGGSPGDLLCLLEADIGIVI 437
           ESISTGEI+ K+ES +EKLQAF DILK+  SND ++LTVYIGGS GDLLCLLEADIGIVI
Sbjct: 429 ESISTGEIIKKMESAMEKLQAFKDILKEGCSNDMEHLTVYIGGSIGDLLCLLEADIGIVI 488

Query: 438 GSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAEIHAFIL 497
           GSS +LRRLGD FGVSFVPLFS LV++Q++L++G S  WK L GTLYTVSSW EI+AFIL
Sbjct: 489 GSSLNLRRLGDQFGVSFVPLFSGLVKKQQQLIEGGSPNWKGLSGTLYTVSSWTEINAFIL 548

Query: 498 G 498
           G
Sbjct: 549 G 549

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088278|emb|CBI36504.3| unnamed protein product [Vitis vinifera]

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/487 (64%), Positives = 387/487 (79%)

Query: 12  DEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEG 71
           D++ KL I +LRK V ++LK  DS V+EWGF+L +E   + ATVK  DFLL+TASGK+EG
Sbjct: 170 DDDAKLGICQLRKSVLEELKMHDSFVKEWGFDLSKESSLNSATVKYRDFLLATASGKIEG 229

Query: 72  EKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCS 131
            K  GK+ TPFEK KVAAYTL A++PCMRL+  + KE+QALL+P + +H YKKWID Y S
Sbjct: 230 VKGPGKLATPFEKTKVAAYTLGAMTPCMRLYAFLGKELQALLHPSESTHPYKKWIDNYSS 289

Query: 132 QSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWV 191
           + FQ SALQTE+LLDKLSV LTGEEL++I+KLYY+A+KL + FF AQ + Q T VPL+  
Sbjct: 290 EGFQGSALQTEDLLDKLSVSLTGEELDIIEKLYYQAMKLEIEFFCAQLLDQYTIVPLTKG 349

Query: 192 KDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWD 251
            DP    L +F DFD TCT  DSS+ILAE+AI+TA K D +Q E ++  MSSADLRNTW 
Sbjct: 350 HDPAADRLVIFSDFDLTCTVVDSSAILAEIAIITAPKFDQNQPENQIIRMSSADLRNTWG 409

Query: 252 VLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNL 311
           VLS +YTEEYEQCIE+I+ SE V EF+YEGLC+AL+QL+ FEK  NSRV++SGVLKGLNL
Sbjct: 410 VLSKQYTEEYEQCIENILPSEKVEEFDYEGLCKALEQLSDFEKRANSRVIESGVLKGLNL 469

Query: 312 EDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVH 371
           +DIK A + LI QDGC  FFQN +K+ +   DVH+LSYCWCGDLIRSAF+SG L+   VH
Sbjct: 470 DDIKRAGERLILQDGCASFFQNIVKNESLIADVHILSYCWCGDLIRSAFSSGGLHVLNVH 529

Query: 372 SNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA 431
           +NE  ++ESIS GEIV  +ESP++KL+AF +IL++ SND +NLTVYIG S GDLLCLL A
Sbjct: 530 ANEFAFKESISNGEIVKNVESPIDKLKAFLNILENCSNDRKNLTVYIGDSVGDLLCLLNA 589

Query: 432 DIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAE 491
           D+GIVIGSSSSL+R+G  FGVSFVPLF  LV++QKE V+GSS +WK L GTLYTVSSWAE
Sbjct: 590 DVGIVIGSSSSLKRVGSQFGVSFVPLFRFLVKKQKEYVEGSSSRWKGLSGTLYTVSSWAE 649

Query: 492 IHAFILG 498
           IHAFILG
Sbjct: 650 IHAFILG 656

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486577|gb|ABK95127.1| unknown [Populus trichocarpa]

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/487 (64%), Positives = 387/487 (79%), Gaps = 2/487 (0%)

Query: 12  DEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEG 71
           D+E KLAI +LRK V ++LK  +S V+EWG +  +E   + ATVK TDFLL+TASGKVEG
Sbjct: 133 DDEAKLAISELRKGVLEELKMHNSFVQEWGIDPGKEGTINSATVKYTDFLLATASGKVEG 192

Query: 72  EKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCS 131
            K LGK+ TPFE+ KVAAYTL A++PCMRL+  + KE+QA+L+P++  H YKKWID Y S
Sbjct: 193 VKGLGKLATPFERTKVAAYTLGAMTPCMRLYSFLGKELQAVLDPEEDGHPYKKWIDSYSS 252

Query: 132 QSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWV 191
           +SFQ SALQTE+LLDKLSV LTGEEL++I+KLY++A+KL + FF AQP+ Q T  PL+  
Sbjct: 253 ESFQASALQTEDLLDKLSVSLTGEELDIIEKLYHQAMKLEIEFFLAQPIAQTTLAPLTKG 312

Query: 192 KDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWD 251
            +P E  L +F DFD TCT  DSS+ILAE+AI+TA KSD  Q E ++  MSSADLRNTW 
Sbjct: 313 HNPEEDRLVIFSDFDLTCTVVDSSAILAEIAILTAPKSDVVQPETQIARMSSADLRNTWG 372

Query: 252 VLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNL 311
           +LS +YTEEYEQCIESIM S  V EF YE LC+AL+QL+ FE+  NSRV+ SGVLKGLNL
Sbjct: 373 LLSGQYTEEYEQCIESIMPSAKV-EFNYEALCKALEQLSDFERRANSRVIDSGVLKGLNL 431

Query: 312 EDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVH 371
           ED+K A + LI QDGC  FFQ  +K+ N  T+VHVLSYCWCGDLIRSAF+SG L+A  +H
Sbjct: 432 EDVKRAGERLILQDGCIGFFQKIVKNENLNTNVHVLSYCWCGDLIRSAFSSGGLDALNIH 491

Query: 372 SNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA 431
           +NEL++EESISTGEIV K+ESP++K QAFNDILK++S+D +NLTVYIG S GDLLCLL+A
Sbjct: 492 ANELIFEESISTGEIVKKVESPMDKAQAFNDILKNYSSDRKNLTVYIGDSVGDLLCLLQA 551

Query: 432 DIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAE 491
           DIGIV+GSS+SLR +G  +GVSFVPLF  LV +QKE  DG S  WK L G LYTVSSW+E
Sbjct: 552 DIGIVVGSSASLRSVGSQYGVSFVPLFPGLVRKQKE-SDGESPNWKGLSGILYTVSSWSE 610

Query: 492 IHAFILG 498
           IHAFILG
Sbjct: 611 IHAFILG 617

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125750|ref|XP_002319666.1| predicted protein [Populus trichocarpa] gi|222858042|gb|EEE95589.1| predicted protein [Populus trichocarpa]

 Score =  639 bits (1647), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 318/489 (65%), Positives = 387/489 (79%), Gaps = 2/489 (0%)

Query: 10  SHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKV 69
           + D+E KLA  +LRK V ++LK  +S V+EWG +  +E   + ATVK TDFLL+TASGKV
Sbjct: 90  ADDDEAKLATSELRKGVLEELKMQNSFVQEWGTDPGKERTVNSATVKYTDFLLATASGKV 149

Query: 70  EGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYY 129
           EG K  GK+ TPFE+ KVAAYTL+A++PCMRL+  + KE+QALL+P+D  H YKKWID Y
Sbjct: 150 EGVKGPGKLATPFERTKVAAYTLAAMTPCMRLYSFLGKELQALLDPEDDRHPYKKWIDSY 209

Query: 130 CSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLS 189
            S+SFQ SALQTE+LLDKLSV LT EEL++I+KLY++A+KL ++FF AQP+ Q T  PL+
Sbjct: 210 SSESFQASALQTEDLLDKLSVSLTSEELDIIEKLYHQAMKLEIDFFLAQPLAQPTVAPLT 269

Query: 190 WVKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNT 249
              +P E  L +F DFD TCT  DSS+ILAE+AIVTA KSD  QSE ++  MSSADLRNT
Sbjct: 270 KGHNPAEDRLVIFSDFDLTCTVVDSSAILAEIAIVTAPKSDVVQSEAQIARMSSADLRNT 329

Query: 250 WDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGL 309
           WD+LS +YTEEYEQCIESIM S+ V EF YE LC+AL+QL  FE+  NSRV++S VLKGL
Sbjct: 330 WDLLSGQYTEEYEQCIESIMPSKKV-EFNYEALCKALEQLLDFERRVNSRVIESEVLKGL 388

Query: 310 NLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFR 369
           NLED+K A + LI QDGC  FFQ  + + N  T+VHVLSYCWCGDLIRSAF+SG L+   
Sbjct: 389 NLEDVKRAGERLILQDGCTSFFQKIVNNENLNTNVHVLSYCWCGDLIRSAFSSGGLDV-N 447

Query: 370 VHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLL 429
           VH+NEL+++ESISTGEIV K+ESPL+K QAFNDILK++SND +NLTVYIG S GDLLCLL
Sbjct: 448 VHANELIFDESISTGEIVKKVESPLDKAQAFNDILKNYSNDRKNLTVYIGDSVGDLLCLL 507

Query: 430 EADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSW 489
           +ADIGIV+GSS+SLR++G  FGVSFVPLF  LV +QKE    SS  WK L G LYTVSSW
Sbjct: 508 KADIGIVVGSSASLRKVGSQFGVSFVPLFPGLVRKQKESDGESSPNWKGLSGILYTVSSW 567

Query: 490 AEIHAFILG 498
           AEIHAFILG
Sbjct: 568 AEIHAFILG 576

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576723|ref|XP_003556479.1| PREDICTED: uncharacterized protein LOC100813450 [Glycine max]

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 300/487 (61%), Positives = 383/487 (78%)

Query: 12  DEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEG 71
           D++ KL I +LRK V ++LK  +SLV+EWG +L +E   + ATVK T+FLL+TASGK+EG
Sbjct: 120 DDDAKLGICELRKAVLEELKMHNSLVQEWGLDLAKEHGINSATVKYTEFLLATASGKIEG 179

Query: 72  EKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCS 131
            K  GK+ TPFEK K+AAYTL A++PCMRL+ V+ K+ Q LL+ ++ +H Y KWID Y S
Sbjct: 180 LKGPGKLATPFEKTKIAAYTLGAMTPCMRLYAVLGKKFQELLDSNESTHPYNKWIDNYSS 239

Query: 132 QSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWV 191
             FQ + LQTE+LLDKLSV LTGEEL+VI+KLYY+A+KL ++FF+AQP+ Q T VPL+  
Sbjct: 240 DGFQATTLQTEDLLDKLSVSLTGEELDVIEKLYYQAMKLEIDFFSAQPLFQPTIVPLTKG 299

Query: 192 KDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWD 251
             P E HL +F DFD TCT  DSS+ILAE+AIVTA KSD +Q E ++  M S+DLRNTW 
Sbjct: 300 HKPAEDHLIVFSDFDLTCTVVDSSAILAEIAIVTAPKSDQNQPEDQIVRMLSSDLRNTWG 359

Query: 252 VLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNL 311
            LS +YTEEYEQCIESIM S+ +  F+Y+ L  AL+QL+ FE   N+RV++SGVLKG++L
Sbjct: 360 FLSKQYTEEYEQCIESIMPSDRLNNFDYKELSMALEQLSKFENTANNRVIESGVLKGISL 419

Query: 312 EDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVH 371
           EDIK A + LI QDGC  FFQ+ +K+ N  ++VHVLSYCWCGDLIRSAF+S DLN   VH
Sbjct: 420 EDIKRAGERLILQDGCTNFFQSIVKNENLNSNVHVLSYCWCGDLIRSAFSSADLNELNVH 479

Query: 372 SNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA 431
           +NE  YE S+STGEIV K+ESP++K++AF +ILK+ ++D++ LTVYIG S GDLLCLLEA
Sbjct: 480 ANEFTYEGSVSTGEIVKKVESPIDKVEAFRNILKNCNDDKKKLTVYIGDSVGDLLCLLEA 539

Query: 432 DIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAE 491
           D+GIVIGSSSSLR +G  FG+SFVPL+S LV++QKE V+GS+  WK L G LYTVSSWAE
Sbjct: 540 DVGIVIGSSSSLRSVGTQFGISFVPLYSGLVKKQKEYVEGSTSNWKGLSGILYTVSSWAE 599

Query: 492 IHAFILG 498
           +HAFILG
Sbjct: 600 VHAFILG 606

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535194|ref|XP_003536133.1| PREDICTED: uncharacterized protein LOC100788250 [Glycine max]

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 295/487 (60%), Positives = 377/487 (77%)

Query: 12  DEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEG 71
           D++ KL I +LRK V ++LK  + LV+E   +L +E   + ATVK T+FLL+TASGK+EG
Sbjct: 117 DDDAKLGICELRKAVLEELKMHNLLVQERELDLAKEHGINSATVKYTEFLLATASGKIEG 176

Query: 72  EKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCS 131
            K  GK+ TPFEK K+AAYTL A++PCMRL+ V+ K+ Q LL+ ++ +H Y KWI+ Y S
Sbjct: 177 LKGPGKLATPFEKTKIAAYTLGAMTPCMRLYAVMGKKFQELLDSNESTHPYNKWINNYSS 236

Query: 132 QSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWV 191
             FQ + LQTE+LLDKLSV LTGEEL+VI+KLYY+A+KL + FF+AQP+ Q T VPL+  
Sbjct: 237 DGFQATTLQTEDLLDKLSVSLTGEELDVIEKLYYQAMKLEIEFFSAQPLFQPTIVPLTKG 296

Query: 192 KDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWD 251
             PVE HL +F DFD TCT  DSS+ILAE+AIVTA KSD +Q E ++  M S+DLRNTW 
Sbjct: 297 HKPVEDHLIIFSDFDLTCTVVDSSAILAEIAIVTAPKSDQNQPEDQIVRMLSSDLRNTWG 356

Query: 252 VLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNL 311
            LS +YTEEYEQCIESIM  + +  F+Y+ L  AL+QL+ FE   N+RV++SGVLKG++L
Sbjct: 357 FLSKQYTEEYEQCIESIMPPDRLNNFDYKELSMALEQLSKFENTANNRVIESGVLKGISL 416

Query: 312 EDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVH 371
           EDIK A + LI QDGC  FFQ+ +K+ N   +VHVLSYCWCGDLIRS F+S DLN   VH
Sbjct: 417 EDIKRAGERLILQDGCPNFFQSIVKNENLNANVHVLSYCWCGDLIRSTFSSADLNELNVH 476

Query: 372 SNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA 431
           +NE  YE S+STGEIV K+ESP++K++AF +ILK+ ++D++ LTVYIG S GDLLCLLEA
Sbjct: 477 ANEFTYEGSVSTGEIVKKVESPIDKVEAFRNILKNCNDDKKKLTVYIGDSVGDLLCLLEA 536

Query: 432 DIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAE 491
           D+GIVIGSSSSLR +G  FG+SFVPL+S LV++QKE V+GS+  WK L G LYTVSSWAE
Sbjct: 537 DVGIVIGSSSSLRSVGTQFGISFVPLYSGLVKKQKEYVEGSTSDWKGLSGILYTVSSWAE 596

Query: 492 IHAFILG 498
           +HAFILG
Sbjct: 597 VHAFILG 603

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744225|emb|CBI37195.3| unnamed protein product [Vitis vinifera]

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 301/453 (66%), Positives = 360/453 (79%), Gaps = 10/453 (2%)

Query: 19  IRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKI 78
           IRK+RK V + L+  D  VR+WGF+LP+EI  + AT K TDFLL+TASGK          
Sbjct: 78  IRKMRKLVIEALRMRDDAVRDWGFDLPKEIPYNSATSKYTDFLLATASGKTA-------- 129

Query: 79  ETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESA 138
            TPFEK KVAAYTL+AI+P MR +  I+ EIQ LL+P+DGSH YKKWID Y SQSF+ SA
Sbjct: 130 -TPFEKTKVAAYTLAAIAPYMRFYAFISNEIQTLLDPNDGSHKYKKWIDSYSSQSFEASA 188

Query: 139 LQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGH 198
           LQ E+LLDKLS+ LTGEELE+++K+Y++A KL V+FF AQPV QQT VPL  V D  + H
Sbjct: 189 LQNEDLLDKLSISLTGEELEILEKVYHQATKLEVDFFYAQPVVQQTIVPLCRVHDHAKYH 248

Query: 199 LTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYT 258
           LT+FCDFD TCT  DSS++LAE+AIVTA K D + SE +L  MSS DL+NTW VLST+YT
Sbjct: 249 LTVFCDFDMTCTPIDSSALLAEIAIVTAPKIDLNASETQLVRMSSTDLKNTWGVLSTQYT 308

Query: 259 EEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWAS 318
           EE E+C+ESI+ SE V +F YEGLC+AL+QL+ FEK  NSRVVQSGVLKGLNLEDIK A 
Sbjct: 309 EELEKCMESIVPSETVEKFNYEGLCKALEQLSDFEKRANSRVVQSGVLKGLNLEDIKRAG 368

Query: 319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYE 378
           Q LI QDGC  FFQ  +K+ N K DV+VLSYCWCGD I+SAF+SGDL   RV+SNEL YE
Sbjct: 369 QGLILQDGCTGFFQKILKNDNLKADVNVLSYCWCGDFIKSAFSSGDLGVVRVYSNELAYE 428

Query: 379 ESISTGEIVNKLESPLEKLQAFNDILKDH-SNDEQNLTVYIGGSPGDLLCLLEADIGIVI 437
           ESISTGEI+ K+ES +EKLQAF DILK+  SND ++LTVYIGGS GDLLCLLEADIGIVI
Sbjct: 429 ESISTGEIIKKMESAMEKLQAFKDILKEGCSNDMEHLTVYIGGSIGDLLCLLEADIGIVI 488

Query: 438 GSSSSLRRLGDHFGVSFVPLFSSLVERQKELVD 470
           GSS +LRRLGD FGVSFVPLFS LV++Q++L++
Sbjct: 489 GSSLNLRRLGDQFGVSFVPLFSGLVKKQQQLIE 521

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145849|ref|XP_002325785.1| predicted protein [Populus trichocarpa] gi|222862660|gb|EEF00167.1| predicted protein [Populus trichocarpa]

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 300/487 (61%), Positives = 364/487 (74%), Gaps = 28/487 (5%)

Query: 12  DEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEG 71
           D+E KLAI +LRK V ++LK  +S V+EWG +  +E   + ATVK TDFLL+TASGKVEG
Sbjct: 82  DDEAKLAISELRKGVLEELKMHNSFVQEWGIDPGKEGTINSATVKYTDFLLATASGKVEG 141

Query: 72  EKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCS 131
            K LGK+ TPFE+ KVAAYTL A++PCMRL+  + KE+QA+L+P++  H YKKWID Y S
Sbjct: 142 VKGLGKLATPFERTKVAAYTLGAMTPCMRLYSFLGKELQAVLDPEEDGHPYKKWIDSYSS 201

Query: 132 QSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWV 191
           +SFQ SALQTE+LLDKLSV LTGEEL++I+KLY++A+KL + FF AQP+ Q T  PL+  
Sbjct: 202 ESFQASALQTEDLLDKLSVSLTGEELDIIEKLYHQAMKLEIEFFLAQPIAQTTLAPLTKG 261

Query: 192 KDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWD 251
            +P E  L +F DFD TCT  DSS+ILAE+AI+TA KSD  Q E ++  MSSADLRNTW 
Sbjct: 262 HNPEEDRLVIFSDFDLTCTVVDSSAILAEIAILTAPKSDVVQPETQIARMSSADLRNTWG 321

Query: 252 VLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNL 311
           +LS +YTEEYEQCIESIM S  V EF YE LC+AL+QL+ FE+  NSRV+ SGVLKGLNL
Sbjct: 322 LLSGQYTEEYEQCIESIMPSAKV-EFNYEALCKALEQLSDFERRANSRVIDSGVLKGLNL 380

Query: 312 EDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVH 371
           ED+K A + LI QDGC  FFQ  +K+ N  T+VHVLSYCWCGDLIRSAF+SG L+A  +H
Sbjct: 381 EDVKRAGERLILQDGCIGFFQKIVKNENLNTNVHVLSYCWCGDLIRSAFSSGGLDALNIH 440

Query: 372 SNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA 431
           +NEL++EESISTGEI                          NLTVYIG S GDLLCLL+A
Sbjct: 441 ANELIFEESISTGEI--------------------------NLTVYIGDSVGDLLCLLQA 474

Query: 432 DIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVSSWAE 491
           DIGIV+GSS+SLR +G  +GVSFVPLF  LV +QKE  DG S  WK L G LYTVSSW+E
Sbjct: 475 DIGIVVGSSASLRSVGSQYGVSFVPLFPGLVRKQKE-SDGESPNWKGLSGILYTVSSWSE 533

Query: 492 IHAFILG 498
           IHAFILG
Sbjct: 534 IHAFILG 540

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	499
TAIR|locus:2145816	617	AT5G32470 "AT5G32470" [Arabido	0.971	0.786	0.570	3.9e-147
POMBASE|SPBC17G9.12c	274	SPBC17G9.12c "hydrolase (predi	0.458	0.835	0.267	1.6e-07
UNIPROTKB|G4MTS1	304	MGG_04762 "Uncharacterized pro	0.539	0.884	0.247	5e-07
SGD|S000000608	317	YCR015C "Putative protein of u	0.462	0.728	0.230	0.00035

TAIR|locus:2145816 AT5G32470 "AT5G32470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
 Identities = 280/491 (57%), Positives = 365/491 (74%)

Query:    12 DEEDKLAIXXXXXXXXXXXXXXDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEG 71
             D++DKLAI              DS V++W  ++ +E+  + AT++ T+FLL+TASGKVEG
Sbjct:   127 DDDDKLAISDLRKSVMEELKMHDSFVQDWDLDINKEVSVNSATLRYTEFLLATASGKVEG 186

Query:    72 EKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCS 131
              K  G ++TPFEK KVAAYTL A++PCMRL+  + KE  +LL+  D +H YKKWID Y S
Sbjct:   187 CKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGSLLDLSDVNHPYKKWIDNYSS 246

Query:   132 QSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVKQQTTVPLSWV 191
              +FQ SA QTE+LL+KLSV +TGEEL++I+KLY +A+KL V FF AQP+ Q T VPL  +
Sbjct:   247 DAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHAQPLAQPTIVPL--L 304

Query:   192 KDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWD 251
             K+  +  L +F DFD TCT  DSS+ILAE+AIVTA K +  +S  ++  M S+DL+NTW+
Sbjct:   305 KNHSKDDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQIHRMLSSDLKNTWN 364

Query:   252 VLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNL 311
             +LS +YTE YE+CIESI++ +   +F+YEGLC+AL+QL+ FEK  N+RV++SGVLKGLNL
Sbjct:   365 LLSKQYTEHYEECIESILNKKKADKFDYEGLCKALEQLSDFEKEANNRVIESGVLKGLNL 424

Query:   312 EDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVH 371
             EDIK A + LI QDGC   FQ  +K+ N   ++HVLSYCWCGDLIR+AF++G ++A  VH
Sbjct:   425 EDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIRAAFSAGGVDAVEVH 484

Query:   372 SNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQN---LTVYIGGSPGDLLCL 428
             +NE  +EESISTGEI  K+ESP+ K Q F  IL++  N+      L+VYIG S GDLLCL
Sbjct:   485 ANEFTFEESISTGEIERKVESPINKAQQFKSILQNRKNENNKKSFLSVYIGDSVGDLLCL 544

Query:   429 LEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVD-GSSYKWKRLPGTLYTVS 487
             LEADIGIV+ SSSSLRR+G HFGVSFVPLFS +V++QK+  +  SS  WK L GTLYTVS
Sbjct:   545 LEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTEESSSSAWKGLSGTLYTVS 604

Query:   488 SWAEIHAFILG 498
             SWAEIH+F LG
Sbjct:   605 SWAEIHSFALG 615

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

POMBASE|SPBC17G9.12c SPBC17G9.12c "hydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 146 (56.5 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 70/262 (26%), Positives = 109/262 (41%)

Query:   250 WDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGL 309
             W V+S KY +EY    E++  S  +  +        L    Y E+    R+ +S    GL
Sbjct:    30 WSVISDKYWQEYLAWREALPHSTTLTSY-----LPLLGGSRYLEEASIKRIEKSQYFSGL 84

Query:   310 NLEDIKWASQHLIFQDGCRRFFQNTIKSTNF-KTDVHVLSYCWCGDLIRSAFASG-DLNA 367
             +   +    Q +  + G   F    +      KT  HVLS  W   +I        DL A
Sbjct:    85 SEGALDNIVQLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTA 144

Query:   368 --FRVHSNELVYEESIST--GEIVNKLESPL-----EKLQAFNDILKDHSNDEQNLTVYI 418
                 VH+N+  ++ S +T  G I+ +  S L     +K++ F  I++  +       VYI
Sbjct:   145 DLLCVHANDFDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYI 204

Query:   419 GGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYK-WK 477
             G SP D  CL  + I I++ S+             +  + S   + Q  LVD S +   K
Sbjct:   205 GDSPTDFGCLQISPISILMRSNQK-----------YYDILSRFEDVQ--LVDISEFPVQK 251

Query:   478 RLPGT--LYTVSSWAEIH-AFI 496
              +PG   +YT S W  I  AF+
Sbjct:   252 AVPGKKIIYTCSDWCAIQKAFL 273

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G4MTS1 MGG_04762 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
 Identities = 77/311 (24%), Positives = 122/311 (39%)

Query:   204 DFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQ 263
             DFD T  A DS + L E  +   QK                DL  TW  + + Y  +++ 
Sbjct:     6 DFDGTIIAKDSINCLGEFGVSHQQKH------------RQHDLSPTWKQIVSDYLADHKM 53

Query:   264 CIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIF 323
              + +   +EA     ++     L  L + +    +RV  + + +G   +D+  A +  + 
Sbjct:    54 HVSAYSPAEA-DRLTHDDERAFLHSLQHVDVKSLARVADARIFEGCTADDLYGAGREAVR 112

Query:   324 QD--GCRRFFQNTIK-STNFKTDVHVLSYCWCGDLIRSAFAS-GDLNAFR-VHSNELVYE 378
                   R  F   +         + +LS  W    IR   +  GD      V SNE+  +
Sbjct:   113 TGKVAARGGFAEFVAVMRGAGATLSILSVNWSASFIRGVLSQCGDDVVIEDVVSNEITAD 172

Query:   379 ESIST-GEIVNKLESP-------LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLE 430
               I   GE      +P       LE L+A +    D +     +T+Y G S  DL CLL 
Sbjct:   173 GKIGCLGEGGGAQGTPMMTSLHKLEALRARSAASSDENEISSKITIYFGDSTTDLECLLA 232

Query:   431 ADIGIVIGS--SSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKRLPGTLYTVS- 487
             ADIGIV+ +  +SSL R     G    P            +D  S +W+++P T+ T   
Sbjct:   233 ADIGIVMANDENSSLLRALARLGFE-TP----------HALDAGS-RWQQVPTTVDTRRR 280

Query:   488 -SWAEIHAFIL 497
              +WA     +L
Sbjct:   281 LAWARSFTEVL 291

GO:0005575 "cellular_component" evidence=ND

SGD|S000000608 YCR015C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
 Identities = 58/252 (23%), Positives = 109/252 (43%)

Query:   201 LFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEE 260
             +  DFD T T  D+   +A+L  +   +  P+      T+M   D  + +    T+    
Sbjct:     5 IISDFDETITRVDTICTIAKLPYLLNPRLKPEWGHFTKTYM---DGYHKYKYNGTRSLPL 61

Query:   261 YEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQ- 319
                 + +I+S     +   + L +        E N  + + +  + K ++L+ +K  ++ 
Sbjct:    62 LSSGVPTIISQSNFNKLFADEL-KYQNHNRVVELNSVNEITKQQIFKSISLDQMKTFARD 120

Query:   320 --H--LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNEL 375
               H   + +DG + F  + +K  NF++D +VLS  W  + I        L    +  N+L
Sbjct:   121 QNHEDCLLRDGFKTFCSSVVK--NFESDFYVLSINWSKEFIHEVIGDRRLKNSHIFCNDL 178

Query:   376 --VYEESIST--GEIVNKLESPLEKLQAFNDIL-KDHS--NDEQNLTVY--IGGSPGDLL 426
               V ++   +  GE   +L +  +K++   +IL K  S  N E N   Y  IG S  DLL
Sbjct:   179 KKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKEGNSCSYWYIGDSETDLL 238

Query:   427 CLLEADI-GIVI 437
              +L     G+++
Sbjct:   239 SILHPSTNGVLL 250


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      499       485   0.00081  119 3  11 22  0.41    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  626 (67 KB)
  Total size of DFA:  312 KB (2159 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  42.43u 0.10s 42.53t   Elapsed:  00:00:02
  Total cpu time:  42.43u 0.10s 42.53t   Elapsed:  00:00:02
  Start:  Mon May 20 21:54:39 2013   End:  Mon May 20 21:54:41 2013

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	499
COG0819	218	COG0819, TenA, Putative transcription activator [T	1e-13
TIGR04306	208	TIGR04306, salvage_TenA, thiaminase II	1e-08
PTZ00347	504	PTZ00347, PTZ00347, phosphomethylpyrimidine kinase	9e-07
pfam03070	210	pfam03070, TENA_THI-4, TENA/THI-4/PQQC family	3e-04
PRK14713	530	PRK14713, PRK14713, multifunctional hydroxymethylp	0.003

>gnl|CDD|223889 COG0819, TenA, Putative transcription activator [Transcription]

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 24/172 (13%)

Query: 8   SLSHDEEDKLAIRKLRKRVKQKLKTL-DSLVREWGFELPEEIITDD--ATVKCTDFLLST 64
           S + D E    + K+ + + +    L + L  E G  L E + T+   A    T +LL T
Sbjct: 60  SKAPDLELMEELAKIIQFLVEGEMELHERLAEELGISLDELLKTEPSPANKAYTRYLLDT 119

Query: 65  A-SGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYK 123
           A SG                     A  L+A+ PC+  +  I K ++A          Y+
Sbjct: 120 AYSGSF-------------------AELLAALLPCLWGYAEIGKRLKAKPRASPN-PPYQ 159

Query: 124 KWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
           +WID Y S+ FQE+  + E LLD L+   + EELE +K+++  A +  + F+
Sbjct: 160 EWIDTYASEEFQEAVEELEALLDSLAENSSEEELEKLKQIFLTASRFELAFW 211

Length = 218

>gnl|CDD|213919 TIGR04306, salvage_TenA, thiaminase II

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 1/90 (1%)

Query: 88  AAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDK 147
               ++A+ PC+  +   A +++      + S +Y KWI+ Y S  F+E+  + E LL+ 
Sbjct: 116 WQELVAALLPCLWGYGEAATKLKGKHTAPEHS-VYHKWIETYSSSWFREAVNEGENLLNH 174

Query: 148 LSVLLTGEELEVIKKLYYKAIKLHVNFFAA 177
           L+   + EELE +K+++ ++ +   NF+  
Sbjct: 175 LAETSSPEELEKLKEIFAESCEYEYNFWTM 204

The TenA protein of Bacillus subtilis and Staphylococcus aurues, and the C-terminal region of trifunctional protein Thi20p from Saccharomyces cerevisiae, perform cleavages on thiamine and related compounds to produce 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP), a substrate a salvage pathway for thiamine biosynthesis. The gene symbol tenA, for Transcription ENhancement A, reflects a misleading early characterization as a regulatory protein. This family is related to PqqC from the PQQ biosynthesis system (see TIGR02111), heme oxygenase (pfam01126), and CADD (Chlamydia protein Associating with Death Domains), a putative folate metabolism enzyme (see TIGR04305). Length = 208

>gnl|CDD|240375 PTZ00347, PTZ00347, phosphomethylpyrimidine kinase; Provisional

 Score = 51.1 bits (122), Expect = 9e-07
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 22/124 (17%)

Query: 53  ATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQA- 111
           A  K  DFLL++ +    G  V                 ++A+ PC RL+  + +E+   
Sbjct: 111 ACRKYVDFLLASGNADTLGPSV----------------VIAAVIPCARLYAWVGQELTNE 154

Query: 112 LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLH 171
           +   +   H +++W+  Y  +    S  Q E LLDK   +  GE  EV  + Y +A++L 
Sbjct: 155 VELTES--HPFRRWLLSYSDEPINTSVEQLESLLDKY--IRPGEFSEV-AQAYRRAMELE 209

Query: 172 VNFF 175
            +FF
Sbjct: 210 YDFF 213

Length = 504

>gnl|CDD|217351 pfam03070, TENA_THI-4, TENA/THI-4/PQQC family

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 33/169 (19%), Positives = 72/169 (42%), Gaps = 21/169 (12%)

Query: 12  DEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIIT--DDATVKCTDFLLSTASGKV 69
            E  +  I ++   +  +++    L    G    +   T    A     ++LL  A    
Sbjct: 58  LELRREWIDRILDHIGGEIELHLRLAEALGLSREDLSKTEPLPAAKAYVNYLLDLARRGS 117

Query: 70  EGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYY 129
                                 L+A+ PC+ +++ IA+ ++  +N   GS  Y +WID Y
Sbjct: 118 ------------------WLEALAALLPCLFVYQEIAERLKEKINGLSGS-EYYEWIDDY 158

Query: 130 CSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQ 178
            S+ F+ +  + E LL+ L   ++  ELE +++++  +++  ++F+   
Sbjct: 159 GSEEFRSAVEEAERLLNHLLAYVSDSELEELQEIFLTSLEFELSFWDMA 207

Members of this family are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes. In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase. The THI-4 protein, which is involved in thiamine biosynthesis, is also a member of this family. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4. This family includes bacterial coenzyme PQQ synthesis protein C or PQQC proteins. Pyrroloquinoline quinone (PQQ) is the prosthetic group of several bacterial enzymes,including methanol dehydrogenase of methylotrophs and the glucose dehydrogenase of a number of bacteria. PQQC has been found to be required in the synthesis of PQQ but its function is unclear. The exact molecular function of members of this family is uncertain. Length = 210

>gnl|CDD|237797 PRK14713, PRK14713, multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional

 Score = 39.8 bits (93), Expect = 0.003
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 21/126 (16%)

Query: 53  ATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQAL 112
            T+  TDFLL+ A+G   G   +G                +A+ PC  L+  +  E+ A 
Sbjct: 419 VTLAYTDFLLARAAG---GSYAVG---------------AAAVLPCFWLYAEVGAELHAR 460

Query: 113 L-NPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLH 171
             NPDD  H Y +W+  Y    F  +  +    +D+     +  E   + + +  A +  
Sbjct: 461 AGNPDD--HPYAEWLQTYADPEFAAATRRAIAFVDRAFRAASPAERAAMARAFLTACRYE 518

Query: 172 VNFFAA 177
           + FF  
Sbjct: 519 LEFFDQ 524

Length = 530

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	499
COG0819	218	TenA Putative transcription activator [Transcripti	100.0
PRK14713	530	multifunctional hydroxymethylpyrimidine phosphokin	99.96
PRK09517	755	multifunctional thiamine-phosphate pyrophosphoryla	99.95
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.94
PF03070	210	TENA_THI-4: TENA/THI-4/PQQC family; InterPro: IPR0	99.94
PTZ00347	504	phosphomethylpyrimidine kinase; Provisional	99.94
COG4359	220	Uncharacterized conserved protein [Function unknow	99.93
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.92
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.9
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.88
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.88
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.85
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.84
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.84
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.83
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	99.83
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.82
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.82
KOG3128	298	consensus Uncharacterized conserved protein [Funct	99.8
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.8
PRK11590	211	hypothetical protein; Provisional	99.77
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.76
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.76
PLN02954	224	phosphoserine phosphatase	99.73
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.7
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.6
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.6
KOG2598	523	consensus Phosphomethylpyrimidine kinase [Coenzyme	99.59
PLN02177	497	glycerol-3-phosphate acyltransferase	99.45
PRK08238	479	hypothetical protein; Validated	99.24
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.07
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.04
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.98
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	98.97
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	98.95
PRK13288	214	pyrophosphatase PpaX; Provisional	98.94
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	98.93
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	98.92
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	98.9
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	98.89
PRK13226	229	phosphoglycolate phosphatase; Provisional	98.86
PRK13223	272	phosphoglycolate phosphatase; Provisional	98.86
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	98.82
PRK13225	273	phosphoglycolate phosphatase; Provisional	98.82
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	98.79
PLN02575	381	haloacid dehalogenase-like hydrolase	98.78
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	98.77
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	98.77
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	98.74
PRK14988	224	GMP/IMP nucleotidase; Provisional	98.74
PRK11587	218	putative phosphatase; Provisional	98.73
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	98.73
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	98.7
PRK09449	224	dUMP phosphatase; Provisional	98.69
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	98.68
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	98.65
PLN02940	382	riboflavin kinase	98.65
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	98.6
COG0546	220	Gph Predicted phosphatases [General function predi	98.6
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	98.58
PRK01122	679	potassium-transporting ATPase subunit B; Provision	98.57
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	98.55
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	98.54
PRK14010	673	potassium-transporting ATPase subunit B; Provision	98.53
PLN02499	498	glycerol-3-phosphate acyltransferase	98.52
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	98.49
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.48
PHA02597	197	30.2 hypothetical protein; Provisional	98.47
PRK10563	221	6-phosphogluconate phosphatase; Provisional	98.47
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.46
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.44
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	98.42
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.42
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.39
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	98.38
PRK15122	903	magnesium-transporting ATPase; Provisional	98.34
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	98.34
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	98.32
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	98.3
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	98.29
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	98.28
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	98.28
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.24
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	98.24
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.22
PRK10748	238	flavin mononucleotide phosphatase; Provisional	98.19
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.19
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	98.19
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.18
PRK10671	834	copA copper exporting ATPase; Provisional	98.18
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.12
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	98.11
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.11
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.1
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	98.02
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	98.02
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	98.0
COG4030	315	Uncharacterized protein conserved in archaea [Func	97.99
PLN02811	220	hydrolase	97.93
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.88
COG4087	152	Soluble P-type ATPase [General function prediction	97.84
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	97.84
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	97.83
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	97.83
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	97.82
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.81
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	97.8
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	97.8
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	97.75
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	97.75
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	97.68
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	97.64
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	97.63
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.57
PRK10513	270	sugar phosphate phosphatase; Provisional	97.56
PRK10976	266	putative hydrolase; Provisional	97.54
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	97.49
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.43
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.39
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.38
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	97.36
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.34
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.32
PLN03190	1178	aminophospholipid translocase; Provisional	97.28
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.26
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	97.26
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.24
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	97.24
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.22
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	97.2
PRK06769	173	hypothetical protein; Validated	97.19
PLN02887	580	hydrolase family protein	97.18
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	97.15
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	97.14
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.11
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.03
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.0
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	96.96
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	96.91
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	96.84
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	96.8
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	96.75
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.73
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.71
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	96.68
PLN02382	413	probable sucrose-phosphatase	96.63
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	96.51
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	96.5
PHA02530	300	pseT polynucleotide kinase; Provisional	96.34
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	96.24
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	96.21
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.18
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	96.07
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	95.96
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	95.95
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	95.94
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	95.85
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	95.84
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	95.72
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	95.72
COG0241	181	HisB Histidinol phosphatase and related phosphatas	95.56
COG3700	237	AphA Acid phosphatase (class B) [General function	95.31
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	95.28
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	94.99
PTZ00174	247	phosphomannomutase; Provisional	94.83
PLN02423	245	phosphomannomutase	94.57
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	94.47
KOG0206	1151	consensus P-type ATPase [General function predicti	93.14
PLN02580	384	trehalose-phosphatase	92.85
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	92.47
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	91.97
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	91.75
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	91.49
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	90.94
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	90.61
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	89.94
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	88.93
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	88.0
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	87.14
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	87.0
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	86.69
PHA03398	303	viral phosphatase superfamily protein; Provisional	86.58
KOG0208	1140	consensus Cation transport ATPase [Inorganic ion t	86.21
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	84.67
PLN02645	311	phosphoglycolate phosphatase	83.33
KOG0205	942	consensus Plasma membrane H+-transporting ATPase [	81.65
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	81.47
PRK05157	246	pyrroloquinoline quinone biosynthesis protein PqqC	81.13
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	81.04
TIGR02111	239	PQQ_syn_pqqC coenzyme PQQ biosynthesis protein C.	80.53

>COG0819 TenA Putative transcription activator [Transcription]

Probab=100.00  E-value=6.9e-33  Score=264.72  Aligned_cols=155  Identities=30%  Similarity=0.426  Sum_probs=143.6

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++||+|.+.+..+.+.+..+. .|+.+|+.+++++||+.++  +..++|+|.+||+||++++ .|++             
T Consensus        59 ~~ka~~~~~~~~~~~~~~~~~~~E~~~h~~~~~~lgis~~~~~~~~~~~~~~aYt~ym~~~~~~g~~-------------  125 (218)
T COG0819          59 ASKAPDLELMEELAKIIQFLVEGEMELHERLAEELGISLDELLKTEPSPANKAYTRYLLDTAYSGSF-------------  125 (218)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhcCCCchHHHHHHHHHHHHhcCCH-------------
Confidence            899999999999999888777 6999999999999999843  6789999999999999999 6887             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|++||+++.+..... ++++|++||++|+|++|++.|++++++||+++...+++++++|++
T Consensus       126 ------~~~~aAl~PC~~~Y~eig~~~~~~~~~~-~~~~Y~~Wi~~Y~s~ef~~~v~~~~~~ld~~~~~~~~~~~~~l~~  198 (218)
T COG0819         126 ------AELLAALLPCLWGYAEIGKRLKAKPRAS-PNPPYQEWIDTYASEEFQEAVEELEALLDSLAENSSEEELEKLKQ  198 (218)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHhccccC-CCCcHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence                  6799999999999999999998754323 789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCC
Q 010855          163 LYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +|.+|+++|++||+|||..
T Consensus       199 iF~~ss~~E~~Fwd~a~~~  217 (218)
T COG0819         199 IFLTASRFELAFWDMAYRL  217 (218)
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999874

>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional

Probab=99.96  E-value=2e-28  Score=265.66  Aligned_cols=154  Identities=18%  Similarity=0.359  Sum_probs=136.8

Q ss_pred             ccc-cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHh-cCCcccccccccccc
Q 010855            4 FSK-PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIET   80 (499)
Q Consensus         4 ~~~-~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~   80 (499)
                      |+. ++||+|.+++.++...+..+. .|+++|+.++++||++    .+++|+|.+|++||++++ +|++           
T Consensus       372 ~a~~~aka~~~e~~~~~~~~~~~~~~~E~~~h~~~~~~~~~~----~~~~p~~~aY~~~l~~~a~~~~~-----------  436 (530)
T PRK14713        372 LARLAALAPDPAEQVFWAQSAQACLEVESELHRSWLGDRDAD----TAPSPVTLAYTDFLLARAAGGSY-----------  436 (530)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc----CCCChHHHHHHHHHHHHHhcCCH-----------
Confidence            444 899999999988877765554 8999999999999873    578999999999999998 5775           


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHH
Q 010855           81 PFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVI  160 (499)
Q Consensus        81 ~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~  160 (499)
                              +++++||+||+|+|.+||+++..... ..++|+|++||++|+|++|.++++++++++|++++.++++++++|
T Consensus       437 --------~~~l~AllPC~~~Y~~ig~~l~~~~~-~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~~  507 (530)
T PRK14713        437 --------AVGAAAVLPCFWLYAEVGAELHARAG-NPDDHPYAEWLQTYADPEFAAATRRAIAFVDRAFRAASPAERAAM  507 (530)
T ss_pred             --------HHHHHHHHhHHHHHHHHHHHHHhhcc-CCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence                    67999999999999999999875311 225789999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCC
Q 010855          161 KKLYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       161 ~~~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +++|+++|+||++||||||+.
T Consensus       508 ~~~F~~a~~~E~~Fwd~A~~~  528 (530)
T PRK14713        508 ARAFLTACRYELEFFDQARRR  528 (530)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999863

>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional

Probab=99.95  E-value=5.3e-28  Score=271.65  Aligned_cols=149  Identities=16%  Similarity=0.231  Sum_probs=134.6

Q ss_pred             cCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHh-cCCcccccccccccchhhh
Q 010855            7 PSLSHDEEDKLAIRKLRK-RVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPFEK   84 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~-~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~~~   84 (499)
                      ++||+|.+++.++...+. .+.+|+++|+.+++++|++    .+++|+|.+||+||++++ +|++               
T Consensus       602 ~aka~~~~~~~~~~~~~~~~~~~E~~~h~~~~~~~~~~----~~~~p~~~aYt~~l~~~a~~g~~---------------  662 (755)
T PRK09517        602 SSIAPDSHAQVEWAQSAAECIVVEAELHRSYLSGKEAP----SAPSPVTMAYTDFLIARTYTEDY---------------  662 (755)
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcC----CCCChHHHHHHHHHHHHHhcCCH---------------
Confidence            789999887777777664 5558999999999999863    578999999999999998 5775               


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 010855           85 IKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLY  164 (499)
Q Consensus        85 ~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~F  164 (499)
                          +++++||+||+|+|.+||+++.+...   ++|+|++||++|+|++|.+++.+++++||++++.++++++++|+++|
T Consensus       663 ----~~~laAllPC~w~Y~~ig~~l~~~~~---~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~l~~~F  735 (755)
T PRK09517        663 ----VVGVAAVLPCYWLYAEIGLMLAEQNH---DEHPYKDWLNTYSGEEFIAGTRAAIARVEKALENAGPEQRVDAARAF  735 (755)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHhccC---CCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence                68999999999999999999976322   57899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCC
Q 010855          165 YKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       165 ~~a~~lE~~Fw~~a~~~  181 (499)
                      .++|+||++||||||.+
T Consensus       736 ~~a~~lE~~Fwd~A~~~  752 (755)
T PRK09517        736 LSASVHEREFFDQATRH  752 (755)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999999985

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.94  E-value=2.3e-26  Score=227.17  Aligned_cols=229  Identities=16%  Similarity=0.233  Sum_probs=183.3

Q ss_pred             CCCceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchh
Q 010855          195 VEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAV  274 (499)
Q Consensus       195 ~~~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~  274 (499)
                      +..+++||+|||.|||+.-+-        .+++..            +||.+......+++.|.++..+++.+|+|+|..
T Consensus        19 g~~~lqvisDFD~Tlt~~~~~--------~g~~~~------------s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d   78 (277)
T TIGR01544        19 GAAKLQIISDFDYTLSRFSYE--------DGKRCP------------TCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVD   78 (277)
T ss_pred             ChhheEEeeccCccceeeecC--------CCCCCc------------chHhHHhhCCCCCHHHHHHHHHHHhhccceecC
Confidence            458999999999999986321        222221            466677777888999999999999999999999


Q ss_pred             hcCCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC
Q 010855          275 AEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQ--HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC  352 (499)
Q Consensus       275 ~~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s  352 (499)
                      +.++.+++.+   .|.|||.++++.+.+.    +++++++.++.+  ++.++||+.+|++.|+++|   +++.|+|+|+ 
T Consensus        79 ~~~~~~eK~~---~m~eWw~k~~~l~~~~----~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~G---Ipv~IvS~G~-  147 (277)
T TIGR01544        79 PVLTVEEKYP---YMVEWWTKSHGLLVQQ----AFPKAKIKEIVAESDVMLKDGYENFFDKLQQHS---IPVFIFSAGI-  147 (277)
T ss_pred             CCCChHHhhh---HHHHHHHHHHHHHhcC----CCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCC---CcEEEEeCCc-
Confidence            8899999886   6889999999999876    469999999986  8999999999999999999   9999999998 


Q ss_pred             hHHHHHHHHcCCC--CceEEEeeceEee-CCeeeccccccCCChhhhHHHHHH-HHhhcC-CCCCceEEEEcCCcccHHH
Q 010855          353 GDLIRSAFASGDL--NAFRVHSNELVYE-ESISTGEIVNKLESPLEKLQAFND-ILKDHS-NDEQNLTVYIGGSPGDLLC  427 (499)
Q Consensus       353 ~~~I~~~L~~~gl--~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~~l~~-~~~~~~-~~~~~~vIyiGDs~tDl~~  427 (499)
                      ..+|+.+|++.|+  .++.|+||+|.|+ +|+++| +.++.....+|.+.+.+ .....+ .-.+.++|++|||.||+.|
T Consensus       148 ~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~m  226 (277)
T TIGR01544       148 GNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRM  226 (277)
T ss_pred             HHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhH
Confidence            7899999998887  4679999999995 699999 56667777889876554 332222 1135789999999999999


Q ss_pred             HHhcC-----ccEEEcCC---chHHhhhhhhCCccc
Q 010855          428 LLEAD-----IGIVIGSS---SSLRRLGDHFGVSFV  455 (499)
Q Consensus       428 l~~Ad-----igiv~~~~---~~L~~~~~~~gi~~~  455 (499)
                      +.-..     +-|-|-+.   ..|.+|.+.+.|-++
T Consensus       227 a~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~  262 (277)
T TIGR01544       227 ADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV  262 (277)
T ss_pred             hcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence            87662     12333332   468888888876544

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PF03070 TENA_THI-4: TENA/THI-4/PQQC family; InterPro: IPR004305 Proteins containing this domain are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes

Probab=99.94  E-value=2.2e-27  Score=227.72  Aligned_cols=154  Identities=29%  Similarity=0.487  Sum_probs=138.7

Q ss_pred             cCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDK-LAIRKLRKRVKQKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~-~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++|++|.+.+ .++..+...+.+|+++|+.+++.+|++.++  ..+++|+|.+|++||++++ ++++             
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~gi~~~~~~~~~~~p~~~~y~~~l~~~a~~~~~-------------  118 (210)
T PF03070_consen   52 ASKAPDPEEQRELLSRLIQEIEEELELHEDFAEELGISREDLENIEPSPATRAYTDFLLSLAQTGSL-------------  118 (210)
T ss_dssp             HHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHSTC-HHHHHHHHHHHHHHHHSSH-------------
T ss_pred             HhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhhhhHHHHHHHHHHHHhccCCH-------------
Confidence            7899999888 556666677779999999999999999885  6789999999999999998 5776             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|.++|+++.+... ...+++|++||+.|++++|.+.+.++++++|+++..++++++++|++
T Consensus       119 ------~~~l~al~pc~~~Y~~~~~~~~~~~~-~~~~~~y~~wi~~y~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (210)
T PF03070_consen  119 ------AEGLAALLPCEWIYAEIGKRLAEKLR-APEDNPYQEWIDMYASEEFEAFVEWLEELLDELAAEASDEERERLEE  191 (210)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHHHCS-TTSSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHhcccc-CCCCccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence                  68999999999999999999987644 23778999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCC
Q 010855          163 LYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~~  180 (499)
                      +|+++|++|+.||++||.
T Consensus       192 ~f~~~~~~E~~Fwd~a~~  209 (210)
T PF03070_consen  192 IFRRSCELEYDFWDAAYN  209 (210)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999999864

In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase []. The THI-4 protein, which is involved in thiamine biosynthesis, also contains this domain. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4 []. The exact molecular function of this domain is uncertain.; PDB: 2RD3_D 3RM5_B 1UDD_D 1Z72_B 3HML_A 3HLX_A 3HNH_A 3DDE_B 3OQL_A 2A6B_A ....

>PTZ00347 phosphomethylpyrimidine kinase; Provisional

Probab=99.94  E-value=4.5e-26  Score=246.26  Aligned_cols=172  Identities=21%  Similarity=0.303  Sum_probs=137.0

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHh-cCCcccccccccccchhhh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPFEK   84 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~~~   84 (499)
                      ++|++|.+++.++...+..+. +|..+|+.++..     .+..+++|+|.+||+||++++ .|++.              
T Consensus        69 ~~ka~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~-----~~~~~~~p~~~aY~~~l~~~a~~g~~~--------------  129 (504)
T PTZ00347         69 ITKSDVTATGGGLLELLKGVLEELKNCHHHYIDN-----PDAAGPEAACRKYVDFLLASGNADTLG--------------  129 (504)
T ss_pred             HhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhccCCCHHHHHHHHHHHHHHhcCCcc--------------
Confidence            789999988888888776666 677899999742     124678999999999999999 56642              


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 010855           85 IKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLY  164 (499)
Q Consensus        85 ~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~F  164 (499)
                         ++++++||+||+|+|++||+++....... ++|+|++||++|+|++|.+++.+++++||+++.   ++++++|+++|
T Consensus       130 ---~~~~l~Al~pC~~~Y~~ig~~l~~~~~~~-~~~~y~~Wi~~y~~~~f~~~~~~~~~~ld~~~~---~~~~~~~~~~F  202 (504)
T PTZ00347        130 ---PSVVIAAVIPCARLYAWVGQELTNEVELT-ESHPFRRWLLSYSDEPINTSVEQLESLLDKYIR---PGEFSEVAQAY  202 (504)
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHHHHhccCCC-CCChHHHHHHhcCCHHHHHHHHHHHHHHHHHhc---hhhHHHHHHHH
Confidence               26899999999999999999987532222 578999999999999999999999999999974   36888899999


Q ss_pred             HHHHHHHHHhcCCCCCCCCccccccCCCCCCCCceEEEEeCCcc
Q 010855          165 YKAIKLHVNFFAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWT  208 (499)
Q Consensus       165 ~~a~~lE~~Fw~~a~~~~~~~~p~~~~~~~~~~~~~ii~DFD~T  208 (499)
                      +++|+||++||+|||..+  .+|....-  ..+..+.|.=.|-+
T Consensus       203 ~~~~~~E~~Fw~~Ay~~~--~w~~~~~~--~~~~vLtIag~D~s  242 (504)
T PTZ00347        203 RRAMELEYDFFDSFGYCL--GRPVENPM--KIPTVLTVSGSDSG  242 (504)
T ss_pred             HHHHHHHHHHhHhHHhhh--cccccCCC--CCCeEEEEeCcCCC
Confidence            999999999999999854  55553322  12345555555544

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=99.93  E-value=2.8e-25  Score=201.07  Aligned_cols=195  Identities=16%  Similarity=0.174  Sum_probs=143.3

Q ss_pred             CceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhhc
Q 010855          197 GHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAE  276 (499)
Q Consensus       197 ~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~  276 (499)
                      ++..+++|||||||.+|+.+.|...-                       ....|..+.+..+.+....+.          
T Consensus         2 kk~vi~sDFDGTITl~Ds~~~itdtf-----------------------~~~e~k~l~~~vls~tiS~rd----------   48 (220)
T COG4359           2 KKPVIFSDFDGTITLNDSNDYITDTF-----------------------GPGEWKALKDGVLSKTISFRD----------   48 (220)
T ss_pred             CceEEEecCCCceEecchhHHHHhcc-----------------------CchHHHHHHHHHhhCceeHHH----------
Confidence            46699999999999999998877521                       345677665544433222111          


Q ss_pred             CCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHh-hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHH
Q 010855          277 FEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWAS-QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDL  355 (499)
Q Consensus       277 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~-~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~  355 (499)
                                         ...|+..+ +  +.+.+++.+.. +++.++|||++|++|+++++   +|++|||+|. ..|
T Consensus        49 -------------------~~g~mf~~-i--~~s~~Eile~llk~i~Idp~fKef~e~ike~d---i~fiVvSsGm-~~f  102 (220)
T COG4359          49 -------------------GFGRMFGS-I--HSSLEEILEFLLKDIKIDPGFKEFVEWIKEHD---IPFIVVSSGM-DPF  102 (220)
T ss_pred             -------------------HHHHHHHh-c--CCCHHHHHHHHHhhcccCccHHHHHHHHHHcC---CCEEEEeCCC-chH
Confidence                               11223222 1  34677777775 47999999999999999999   9999999997 789


Q ss_pred             HHHHHHcCC----CCceEEEeeceEee-CCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHh
Q 010855          356 IRSAFASGD----LNAFRVHSNELVYE-ESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLE  430 (499)
Q Consensus       356 I~~~L~~~g----l~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~  430 (499)
                      |.++|+..+    +..++|++|+..+. +|-..-...+....|.||...++.+.+.     +..++|+|||++|+.+++.
T Consensus       103 I~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI~~l~e~-----~e~~fy~GDsvsDlsaakl  177 (220)
T COG4359         103 IYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVIHELSEP-----NESIFYCGDSVSDLSAAKL  177 (220)
T ss_pred             HHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhHHHhhcC-----CceEEEecCCcccccHhhh
Confidence            999998753    34456666666663 2322111224567899999999999864     3568899999999999999


Q ss_pred             cCccEEEcCCchHHhhhhhhCCcccccc
Q 010855          431 ADIGIVIGSSSSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       431 Adigiv~~~~~~L~~~~~~~gi~~~p~~  458 (499)
                      +|   ++.++..|..+|++++++|++|+
T Consensus       178 sD---llFAK~~L~nyc~eqn~~f~~fe  202 (220)
T COG4359         178 SD---LLFAKDDLLNYCREQNLNFLEFE  202 (220)
T ss_pred             hh---hHhhHHHHHHHHHHcCCCCcccc
Confidence            99   45566689999999999999996

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.92  E-value=2.1e-24  Score=207.55  Aligned_cols=199  Identities=21%  Similarity=0.173  Sum_probs=164.6

Q ss_pred             CCceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhh
Q 010855          196 EGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVA  275 (499)
Q Consensus       196 ~~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~  275 (499)
                      +.+.+++||||+|||...+++.+++...                      .......++...+..               
T Consensus         3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g----------------------~~~~v~~~t~~~~~~---------------   45 (212)
T COG0560           3 RMKKLAVFDLDGTLINAELIDELARGAG----------------------VGEEVLAITERAMRG---------------   45 (212)
T ss_pred             CccceEEEecccchhhHHHHHHHHHHhC----------------------CHHHHHHHHHHHhcc---------------
Confidence            4567999999999999777777776543                      112222222222211               


Q ss_pred             cCCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhhc-CCCChhHHHHHHHHHHcCCCcccEEEEeccCChH
Q 010855          276 EFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQH-LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGD  354 (499)
Q Consensus       276 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~~-i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~  354 (499)
                                   ..+|+...-.|+   ..++|++.+.+.+..+. +.++||+.+++++|+++|   +.+.|||+|+ ..
T Consensus        46 -------------~~~~~~~~~~~v---~~l~g~~~~~v~~~~~~~~~l~~ga~elv~~lk~~G---~~v~iiSgg~-~~  105 (212)
T COG0560          46 -------------ELDFEESLRLRV---ALLKGLPVEVLEEVREEFLRLTPGAEELVAALKAAG---AKVVIISGGF-TF  105 (212)
T ss_pred             -------------cccHHHHHHHHH---HHhCCCCHHHHHHHHHhcCcCCccHHHHHHHHHHCC---CEEEEEcCCh-HH
Confidence                         113444444555   68999999999999998 999999999999999999   9999999998 57


Q ss_pred             HHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          355 LIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       355 ~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      +++++.+..|+  .+++||++..++|++||.+.+++|.+.+|..+++++....+.+ ..++++||||.||++||..||.|
T Consensus       106 lv~~ia~~lg~--d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~  182 (212)
T COG0560         106 LVEPIAERLGI--DYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIP-LEETVAYGDSANDLPMLEAAGLP  182 (212)
T ss_pred             HHHHHHHHhCC--chheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCCC
Confidence            99999888764  7899999999889999999999999999999999999887764 46899999999999999999999


Q ss_pred             EEEcCCchHHhhhhhhCCcc
Q 010855          435 IVIGSSSSLRRLGDHFGVSF  454 (499)
Q Consensus       435 iv~~~~~~L~~~~~~~gi~~  454 (499)
                      |++.+++.|.+.++..+++.
T Consensus       183 ia~n~~~~l~~~a~~~~~~~  202 (212)
T COG0560         183 IAVNPKPKLRALADVRIWPI  202 (212)
T ss_pred             eEeCcCHHHHHHHHHhcChh
Confidence            99999999999999999876

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.90  E-value=5e-23  Score=198.52  Aligned_cols=192  Identities=16%  Similarity=0.183  Sum_probs=138.7

Q ss_pred             EEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhhcCCH
Q 010855          200 TLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEY  279 (499)
Q Consensus       200 ~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~~~~  279 (499)
                      +|+||||||||..|++..+++..                       ..+.|..+.+.++.+.               .++
T Consensus         1 ~~~fDFDgTit~~d~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~---------------~~~   42 (214)
T TIGR03333         1 FIICDFDGTITNNDNIISIMKQF-----------------------APPEWEALKDGVLSKT---------------LSI   42 (214)
T ss_pred             CEEeccCCCCCcchhHHHHHHHh-----------------------CcHHHHHHHHHHHcCC---------------ccH
Confidence            48999999999999988766531                       2356666655444321               111


Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHh-hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHH
Q 010855          280 EGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWAS-QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRS  358 (499)
Q Consensus       280 ~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~-~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~  358 (499)
                      .+..              .++.  ..++.-..+++.+++ +.+.++||+.+++++++++|   ++++|+|+|. ..+|++
T Consensus        43 ~e~~--------------~~~~--~~~~~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~~i~~  102 (214)
T TIGR03333        43 QEGV--------------GRMF--GLLPSSLKEEITSFVLETAEIREGFREFVAFINEHG---IPFYVISGGM-DFFVYP  102 (214)
T ss_pred             HHHH--------------HHHH--hhCCCchHHHHHHHHHhcCcccccHHHHHHHHHHCC---CeEEEECCCc-HHHHHH
Confidence            1111              1111  122222345777764 46899999999999999999   9999999996 789999


Q ss_pred             HHHcCCCCceEEEeeceEeeCCeeeccccc------cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcC
Q 010855          359 AFASGDLNAFRVHSNELVYEESISTGEIVN------KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD  432 (499)
Q Consensus       359 ~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~------~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Ad  432 (499)
                      +++.++ ....|+||++.++++..++....      ...||.||..+++++...     +.++||||||.+|+++++.||
T Consensus       103 il~~~~-~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~-----~~~~i~iGDg~~D~~~a~~Ad  176 (214)
T TIGR03333       103 LLEGIV-EKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEP-----NDYHIVIGDSVTDVEAAKQSD  176 (214)
T ss_pred             HHHhhC-CcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHHhhc-----CCcEEEEeCCHHHHHHHHhCC
Confidence            998763 24679999999987654443221      123488999999987742     357899999999999999999


Q ss_pred             ccEEEcCCchHHhhhhhhCCcccccc
Q 010855          433 IGIVIGSSSSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       433 igiv~~~~~~L~~~~~~~gi~~~p~~  458 (499)
                      +  +++++ .|..+|++.|+++.||.
T Consensus       177 ~--~~ar~-~l~~~~~~~~~~~~~~~  199 (214)
T TIGR03333       177 L--CFARD-YLLNECEELGLNHAPFQ  199 (214)
T ss_pred             e--eEehH-HHHHHHHHcCCCccCcC
Confidence            4  55554 68899999999999985

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.88  E-value=7.6e-22  Score=200.94  Aligned_cols=192  Identities=18%  Similarity=0.146  Sum_probs=152.7

Q ss_pred             CCceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhh
Q 010855          196 EGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVA  275 (499)
Q Consensus       196 ~~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~  275 (499)
                      +.+.+++||||||++..++++.+++...                      ....+..+++.++.+.              
T Consensus       108 ~~~~LvvfDmDGTLI~~e~i~eia~~~g----------------------~~~~v~~it~~~m~Ge--------------  151 (322)
T PRK11133        108 RTPGLLVMDMDSTAIQIECIDEIAKLAG----------------------TGEEVAEVTERAMRGE--------------  151 (322)
T ss_pred             cCCCEEEEECCCCCcchHHHHHHHHHhC----------------------CchHHHHHHHHHHcCC--------------
Confidence            3556999999999999999998887532                      2334444544443211              


Q ss_pred             cCCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHH
Q 010855          276 EFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDL  355 (499)
Q Consensus       276 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~  355 (499)
                                    .+|+.....|+   ..++|.+.+.+.+..+.++++||+.++++.|+++|   +++.|+|+|+ ..+
T Consensus       152 --------------ldf~esl~~rv---~~l~g~~~~il~~v~~~l~l~pGa~elL~~Lk~~G---~~~aIvSgg~-~~~  210 (322)
T PRK11133        152 --------------LDFEASLRQRV---ATLKGADANILQQVRENLPLMPGLTELVLKLQALG---WKVAIASGGF-TYF  210 (322)
T ss_pred             --------------cCHHHHHHHHH---HHhCCCCHHHHHHHHHhCCCChhHHHHHHHHHHcC---CEEEEEECCc-chh
Confidence                          11222333344   45688887777777788999999999999999999   9999999998 568


Q ss_pred             HHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          356 IRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       356 I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ++.++++.++  .++++|.+.+.+|+.||.+.+.++.+..|.+.++++.+..+.+ ..++|+||||.||++|+..||+||
T Consensus       211 ~~~l~~~Lgl--d~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgi  287 (322)
T PRK11133        211 ADYLRDKLRL--DAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEIP-LAQTVAIGDGANDLPMIKAAGLGI  287 (322)
T ss_pred             HHHHHHHcCC--CeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCCC-hhhEEEEECCHHHHHHHHHCCCeE
Confidence            8888877664  6889999999999999998887778889999999999887763 578999999999999999999999


Q ss_pred             EEcCCchHHhhh
Q 010855          436 VIGSSSSLRRLG  447 (499)
Q Consensus       436 v~~~~~~L~~~~  447 (499)
                      ++.+++.+++.+
T Consensus       288 A~nAkp~Vk~~A  299 (322)
T PRK11133        288 AYHAKPKVNEQA  299 (322)
T ss_pred             EeCCCHHHHhhC
Confidence            998888886543

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.88  E-value=9.2e-22  Score=190.29  Aligned_cols=194  Identities=16%  Similarity=0.167  Sum_probs=139.2

Q ss_pred             ceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhhcC
Q 010855          198 HLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEF  277 (499)
Q Consensus       198 ~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~~  277 (499)
                      +.+|+||||||||..|+...+++-   +                    ..+.|+.+.+.|+++...              
T Consensus         3 ~~~vifDfDgTi~~~d~~~~~~~~---~--------------------~~~~~~~i~~~~~~g~~~--------------   45 (219)
T PRK09552          3 SIQIFCDFDGTITNNDNIIAIMKK---F--------------------APPEWEELKDDILSQELS--------------   45 (219)
T ss_pred             CcEEEEcCCCCCCcchhhHHHHHH---h--------------------CHHHHHHHHHHHHhCCcC--------------
Confidence            559999999999999997654431   1                    123466666655543211              


Q ss_pred             CHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHh-hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHH
Q 010855          278 EYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWAS-QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLI  356 (499)
Q Consensus       278 ~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~-~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I  356 (499)
                       +.+   .++          .++   ..+.+...+++.+.. +++.++||+.+++++++++|   +++.|+|+|+ ..+|
T Consensus        46 -~~~---~~~----------~~~---~~l~~~~~~~~~~~~~~~~~l~pG~~e~l~~l~~~g---~~~~IvS~~~-~~~i  104 (219)
T PRK09552         46 -IQE---GVG----------QMF---QLLPSNLKEEIIQFLLETAEIREGFHEFVQFVKENN---IPFYVVSGGM-DFFV  104 (219)
T ss_pred             -HHH---HHH----------HHH---HhCCCCchHHHHHHHHhCCCcCcCHHHHHHHHHHcC---CeEEEECCCc-HHHH
Confidence             111   001          111   223444456676654 57899999999999999999   9999999997 7899


Q ss_pred             HHHHHcCCCCceEEEeeceEeeCCeeecccccc------CCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHh
Q 010855          357 RSAFASGDLNAFRVHSNELVYEESISTGEIVNK------LESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLE  430 (499)
Q Consensus       357 ~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~------~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~  430 (499)
                      +++|++. +....|+||.+.++++..+.....+      ..++.+|..+++++...     +.++||||||.+|+++++.
T Consensus       105 ~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~-----~~~~i~iGDs~~Di~aa~~  178 (219)
T PRK09552        105 YPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDT-----NDFHIVIGDSITDLEAAKQ  178 (219)
T ss_pred             HHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhccC-----CCCEEEEeCCHHHHHHHHH
Confidence            9999987 6557799999988765443222111      12467899988876532     3579999999999999999


Q ss_pred             cCccEEEcCCchHHhhhhhhCCcccccc
Q 010855          431 ADIGIVIGSSSSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       431 Adigiv~~~~~~L~~~~~~~gi~~~p~~  458 (499)
                      ||+  ++++ ..|.++|++.|++++||.
T Consensus       179 Ag~--~~a~-~~l~~~~~~~~~~~~~~~  203 (219)
T PRK09552        179 ADK--VFAR-DFLITKCEELGIPYTPFE  203 (219)
T ss_pred             CCc--ceeH-HHHHHHHHHcCCCccccC
Confidence            985  4444 478899999999999985

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.85  E-value=1.1e-20  Score=183.05  Aligned_cols=128  Identities=17%  Similarity=0.245  Sum_probs=103.0

Q ss_pred             cCCCHHHHHHHhhcCCCChhHHHHHHHHHH--cCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeC-Ce
Q 010855          307 KGLNLEDIKWASQHLIFQDGCRRFFQNTIK--STNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEE-SI  381 (499)
Q Consensus       307 ~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~--~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~-g~  381 (499)
                      .|++.++|.+..+.+++.||+.++++.+.+  .|   .+++|||.+- ..||+.+|+++|+..  .+|++|...+++ |.
T Consensus        56 ~gvt~~~I~~~l~~ip~~pgm~~~l~~l~~~~~~---~~~~IiSDaN-s~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~  131 (234)
T PF06888_consen   56 QGVTPEDIRDALRSIPIDPGMKELLRFLAKNQRG---FDLIIISDAN-SFFIETILEHHGLRDCFSEIFTNPACFDADGR  131 (234)
T ss_pred             cCCCHHHHHHHHHcCCCCccHHHHHHHHHhcCCC---ceEEEEeCCc-HhHHHHHHHhCCCccccceEEeCCceecCCce
Confidence            488999999999999999999999999954  56   9999999995 789999999999864  389999999975 65


Q ss_pred             ee-cccc---ccCC-ChhhhHHHHHHHHhhcCC--CCCceEEEEcCCcccHHHHHh---cCccEEEcCC
Q 010855          382 ST-GEIV---NKLE-SPLEKLQAFNDILKDHSN--DEQNLTVYIGGSPGDLLCLLE---ADIGIVIGSS  440 (499)
Q Consensus       382 ~t-G~~~---~~~~-~g~~K~~~l~~~~~~~~~--~~~~~vIyiGDs~tDl~~l~~---Adigiv~~~~  440 (499)
                      +. .++.   ++.| ...||..+|++++.....  ..+.++||||||.||+|+++.   .|  +++.++
T Consensus       132 l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D--~v~~R~  198 (234)
T PF06888_consen  132 LRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRD--VVFPRK  198 (234)
T ss_pred             EEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCC--EEecCC
Confidence            33 2333   3322 347999999999976311  135789999999999999986   55  677765

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.84  E-value=1.4e-19  Score=174.07  Aligned_cols=132  Identities=9%  Similarity=0.036  Sum_probs=108.6

Q ss_pred             hhhccCCCHHHHHHHhh--------cCCCChhHHHHHH-HHHHcCCCcccEEEEeccCChHHHHHHHHcCCC-CceEEEe
Q 010855          303 SGVLKGLNLEDIKWASQ--------HLIFQDGCRRFFQ-NTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDL-NAFRVHS  372 (499)
Q Consensus       303 ~~~f~Gi~~~~l~~~~~--------~i~lr~G~~efl~-~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl-~~~~I~a  372 (499)
                      ..+|+|++.+++.+.++        ...++||+.+.++ .++++|   ++++|||++. ..+++++++..++ ..++++|
T Consensus        67 ~~~~~g~~~~~l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G---~~v~IvSas~-~~~~~~ia~~~~~~~~~~~i~  142 (210)
T TIGR01545        67 WACTFGHREAHLQDLEADFVAAFRDKVTAFPLVAERLRQYLESSD---ADIWLITGSP-QPLVEAVYFDSNFIHRLNLIA  142 (210)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCC---CEEEEEcCCc-HHHHHHHHHhccccccCcEEE
Confidence            46789999998877653        3468999999997 556679   9999999986 6788888876443 4478999


Q ss_pred             eceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHh
Q 010855          373 NELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRR  445 (499)
Q Consensus       373 N~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~  445 (499)
                      +++++.+|   |.+.+.+|.|..|++++++++..    .....++||||.||++||..||.+++|.+++.|.+
T Consensus       143 t~le~~~g---g~~~g~~c~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~  208 (210)
T TIGR01545       143 SQIERGNG---GWVLPLRCLGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQ  208 (210)
T ss_pred             EEeEEeCC---ceEcCccCCChHHHHHHHHHhCC----ChhheEEecCCcccHHHHHhCCCcEEECcchHhcc
Confidence            99998655   66777899999999999998842    23456799999999999999999999999988864

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.84  E-value=3e-20  Score=172.68  Aligned_cols=121  Identities=17%  Similarity=0.192  Sum_probs=101.1

Q ss_pred             hhccCCCHHHHHH-H-hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEee-CC
Q 010855          304 GVLKGLNLEDIKW-A-SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYE-ES  380 (499)
Q Consensus       304 ~~f~Gi~~~~l~~-~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~-~g  380 (499)
                      ..++|...+++.+ + .+.+.++||+.++++.++++|   ++++|+|+|. ..+|+++++.+|+  ..+++|.+.++ +|
T Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~i~~~~~~~g~--~~~~~~~~~~~~~g  126 (177)
T TIGR01488        53 ALLHRSRSEEVAKEFLARQVALRPGARELISWLKERG---IDTVIVSGGF-DFFVEPVAEKLGI--DDVFANRLEFDDNG  126 (177)
T ss_pred             HHhCCCCHHHHHHHHHHhcCCcCcCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCC--chheeeeEEECCCC
Confidence            4567777566665 5 467889999999999999999   9999999997 7899999998876  47899999995 68


Q ss_pred             eeeccccc-cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhc
Q 010855          381 ISTGEIVN-KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA  431 (499)
Q Consensus       381 ~~tG~~~~-~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A  431 (499)
                      ..+|++.+ .++.+.+|...++++....+.+ +.+++|||||.+|++|++.|
T Consensus       127 ~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       127 LLTGPIEGQVNPEGECKGKVLKELLEESKIT-LKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             EEeCccCCcccCCcchHHHHHHHHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence            88988765 5677899999999988765542 46899999999999999865

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.83  E-value=1.5e-19  Score=174.28  Aligned_cols=137  Identities=21%  Similarity=0.247  Sum_probs=115.8

Q ss_pred             hccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeec
Q 010855          305 VLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTG  384 (499)
Q Consensus       305 ~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG  384 (499)
                      .|.+.+.+.+.+..+.+.++||+.++++.++++|   ++++|||+|+ ..+++.+++..|+  ..+++|.+.++++.++|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~~i--~~~~~~~~~~~~~~~~~  141 (219)
T TIGR00338        68 LLKGLPVELLKEVRENLPLTEGAEELVKTLKEKG---YKVAVISGGF-DLFAEHVKDKLGL--DAAFANRLEVEDGKLTG  141 (219)
T ss_pred             HhCCCCHHHHHHHHhcCCcCCCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCC--CceEeeEEEEECCEEEE
Confidence            4567788888888888999999999999999999   9999999997 7899999988776  45899999999888888


Q ss_pred             cccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhh
Q 010855          385 EIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGD  448 (499)
Q Consensus       385 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~  448 (499)
                      .+.++.+.+.+|...++.++...+.+ +.+++|||||.+|++++..|++++++.+++.+.+.++
T Consensus       142 ~~~~~~~~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~  204 (219)
T TIGR00338       142 LVEGPIVDASYKGKTLLILLRKEGIS-PENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD  204 (219)
T ss_pred             EecCcccCCcccHHHHHHHHHHcCCC-HHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence            77766556667999999888776653 5689999999999999999999999988776765443

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=99.83  E-value=3.3e-20  Score=179.28  Aligned_cols=200  Identities=19%  Similarity=0.298  Sum_probs=142.9

Q ss_pred             ccccccccHHHHHHHHHHHHHHHHhhhcCcchhhcCCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhh--
Q 010855          242 SSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQ--  319 (499)
Q Consensus       242 ~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~--  319 (499)
                      +||.+....+.+++.|.++..+++++|+|+|..+.++.+++.+   .|.+||.++++.+++.    |++++++.++++  
T Consensus        15 sshgil~~~~~~~~~~~~k~~~L~~kY~PIE~dp~~s~eEK~p---~M~EWw~kah~llv~~----~l~k~~i~~~V~~s   87 (246)
T PF05822_consen   15 SSHGILENSKLLPEEYRKKLKELFEKYYPIEIDPTMSIEEKIP---HMEEWWTKAHELLVEQ----GLTKSEIEEAVKES   87 (246)
T ss_dssp             -HHHHHHTSTTS-HHHHHHHHHHHHHHHHHHT-SSS-HHHHHH---HHHHHHHHHHHHHHHH----T-BGGGHHHHHHCS
T ss_pred             ChHHHHhcCCcCCHHHHHHHHHHHhhccccccCCCCCHHHHHH---HHHHHHHHHHHHHHhc----CcCHHHHHHHHHhc
Confidence            4566666777889999999999999999999998899999886   6889999999999987    469999999986  


Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCC--CceEEEeeceEeeC-CeeeccccccCCChhhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDL--NAFRVHSNELVYEE-SISTGEIVNKLESPLEK  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl--~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K  396 (499)
                      ++.||+|+.+|++.|.+++   +|+.|+|+|. +++|+.+|++.+.  ++++|+||.|.|++ |+..| |.++.....+|
T Consensus        88 ~i~LRdg~~~~f~~L~~~~---IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~g-F~~~lIH~~NK  162 (246)
T PF05822_consen   88 DIMLRDGVEEFFDKLEEHN---IPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVG-FKGPLIHTFNK  162 (246)
T ss_dssp             ---B-BTHHHHHHHHHCTT-----EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEE-E-SS---TT-H
T ss_pred             chhhhcCHHHHHHHHHhcC---CCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEee-cCCCceEEeeC
Confidence            6899999999999999999   9999999998 8999999998764  67999999999975 77776 45556666667


Q ss_pred             HH-HHH--HHHhhcCCCCCceEEEEcCCcccHHHHHhc-Cc----cEEEcCC---chHHhhhhhhCCccc
Q 010855          397 LQ-AFN--DILKDHSNDEQNLTVYIGGSPGDLLCLLEA-DI----GIVIGSS---SSLRRLGDHFGVSFV  455 (499)
Q Consensus       397 ~~-~l~--~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A-di----giv~~~~---~~L~~~~~~~gi~~~  455 (499)
                      .. .++  .+...  ...+.+++..|||.+|+.|..-. +.    -|-|-+.   ..|.+|.+.+.|-++
T Consensus       163 n~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv  230 (246)
T PF05822_consen  163 NESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLV  230 (246)
T ss_dssp             HHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEE
T ss_pred             CcccccCchHHHH--hccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEE
Confidence            65 331  22222  22468999999999999998766 32    2223222   468888888876554

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.82  E-value=1.4e-19  Score=173.04  Aligned_cols=129  Identities=19%  Similarity=0.157  Sum_probs=111.8

Q ss_pred             cCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeC-Ceeecc
Q 010855          307 KGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEE-SISTGE  385 (499)
Q Consensus       307 ~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~-g~~tG~  385 (499)
                      .|++.+++++..++++++||+.+++++++++    .++.|||+|+ ..+++++++..|+  .+++||++.+++ |.+||.
T Consensus        53 ~g~~~~~i~~~~~~i~l~pga~ell~~lk~~----~~~~IVS~~~-~~~~~~il~~lgi--~~~~an~l~~~~~g~~tG~  125 (203)
T TIGR02137        53 HGLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGF--PTLLCHKLEIDDSDRVVGY  125 (203)
T ss_pred             CCCCHHHHHHHHHhCCCCccHHHHHHHHHhC----CeEEEEeCCh-HHHHHHHHHHcCC--chhhceeeEEecCCeeECe
Confidence            3999999999999999999999999999985    4899999998 6799999998876  479999999988 888886


Q ss_pred             ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhhhh
Q 010855          386 IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHF  450 (499)
Q Consensus       386 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~  450 (499)
                      ..   ..+.+|..+++.+...     +.++++||||.||++|+..||+||++++++.+.+.+..+
T Consensus       126 ~~---~~~~~K~~~l~~l~~~-----~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~  182 (203)
T TIGR02137       126 QL---RQKDPKRQSVIAFKSL-----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQF  182 (203)
T ss_pred             ee---cCcchHHHHHHHHHhh-----CCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCC
Confidence            43   3456899999988532     247999999999999999999999999999998777665

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.82  E-value=4.5e-19  Score=168.70  Aligned_cols=134  Identities=19%  Similarity=0.156  Sum_probs=115.2

Q ss_pred             hhhccCCCHHHHHHHhhc-------CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeece
Q 010855          303 SGVLKGLNLEDIKWASQH-------LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNEL  375 (499)
Q Consensus       303 ~~~f~Gi~~~~l~~~~~~-------i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l  375 (499)
                      ...|+|++.+++.++++.       ..++||+.++++.++++|   .+++|+|++. ..+++.+++..|+  .+++++++
T Consensus        61 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~v~ivS~s~-~~~v~~~~~~lg~--~~~~~~~l  134 (202)
T TIGR01490        61 LDALAGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEG---HTIVLVSASL-TILVKPLARILGI--DNAIGTRL  134 (202)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHcCC--cceEecce
Confidence            357899999999888762       468999999999999999   9999999997 6799999988765  56899999


Q ss_pred             Ee-eCCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchH
Q 010855          376 VY-EESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSL  443 (499)
Q Consensus       376 ~~-~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L  443 (499)
                      .+ ++|.+||.+.++++.|..|...++++++..+.+ ...+++||||.+|++|+..|++++++.+++.|
T Consensus       135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~l  202 (202)
T TIGR01490       135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVVNPDKKL  202 (202)
T ss_pred             EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEeCCCCCC
Confidence            88 668999998888888999999999998766552 46789999999999999999999998876543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.80  E-value=4.7e-20  Score=174.86  Aligned_cols=228  Identities=15%  Similarity=0.232  Sum_probs=168.0

Q ss_pred             CCCCceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccc-cHHHHHHHHHHHHHHHHhhhcCcc
Q 010855          194 PVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRN-TWDVLSTKYTEEYEQCIESIMSSE  272 (499)
Q Consensus       194 ~~~~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~~~~~y~~~~~~~~~~~~p~~  272 (499)
                      +.+.++++|+|||.|||++-|-        .++.+++            ++..-+ ..+.+...|.++..+++.+|.|+|
T Consensus        34 gga~~~~vIsdfd~TLSrfa~~--------~G~r~pS------------~~~Vfd~~~~~~~~e~~~k~~~LyhkY~PIE   93 (298)
T KOG3128|consen   34 GGAGKLQVISDFDYTLSRFATE--------QGKRCPS------------CFGVFDDNVKRLKPECRAKFVALYHKYYPIE   93 (298)
T ss_pred             CCccceeEeecCchhHHHHHHh--------hcCcCCc------------cccchhhhhhcCCHHHHHHHHHHHhhccCcc
Confidence            4578999999999999985321        2444433            333444 677788889999999999999999


Q ss_pred             hhhcCCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCcccEEEEecc
Q 010855          273 AVAEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQ--HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYC  350 (499)
Q Consensus       273 ~~~~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g  350 (499)
                      .++.++++++.+   .|.+||.++++.+++.    |+++++|+++++  ++.||+|+.+|+..|+.++   +|+.|.|+|
T Consensus        94 idP~ltieEKvp---~MeeWW~kSH~Lliq~----~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~---IP~~iFSAG  163 (298)
T KOG3128|consen   94 IDPVLTIEEKVP---HMEEWWTKSHELLIQG----GFSKNAIDDIVAESNIALREGYEEFFEALQAHE---IPLLIFSAG  163 (298)
T ss_pred             cCCCCChhhhch---HHHHHHhcccceeecC----CcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CceEEEecc
Confidence            999999999987   5789999999999875    579999999976  7899999999999999999   999999999


Q ss_pred             CChHHHHHHHHcCC--CCceEEEeeceEee-CCeeeccccccCCChhhhHH-HHHH---HHhhcCCCCCceEEEEcCCcc
Q 010855          351 WCGDLIRSAFASGD--LNAFRVHSNELVYE-ESISTGEIVNKLESPLEKLQ-AFND---ILKDHSNDEQNLTVYIGGSPG  423 (499)
Q Consensus       351 ~s~~~I~~~L~~~g--l~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~-~l~~---~~~~~~~~~~~~vIyiGDs~t  423 (499)
                      + .+.|+.++++..  .++.+++||.+.|+ +|...| |..+.....+|.. +++.   +...  ...+.++|+.|||.+
T Consensus       164 i-gdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~g-F~~~Lihtfnkn~~v~~~~s~yf~~--~~~~~nVillGdsig  239 (298)
T KOG3128|consen  164 I-GDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCG-FSQPLIHTFNKNSSVLQNESEYFHQ--LAGRVNVILLGDSIG  239 (298)
T ss_pred             h-HHHHHHHHHHHhccCccHHhhhhhhhhcccchhhh-hhHHHHHHHccchHHHHhhhHHHhh--ccCCceEEEeccccc
Confidence            8 889999987642  25788999999997 354333 2222223333322 2222   1111  123678999999999


Q ss_pred             cHHHHHhcC-c------cEEEcC-CchHHhhhhhhCCccc
Q 010855          424 DLLCLLEAD-I------GIVIGS-SSSLRRLGDHFGVSFV  455 (499)
Q Consensus       424 Dl~~l~~Ad-i------giv~~~-~~~L~~~~~~~gi~~~  455 (499)
                      |+.|...+- .      |..... ..++.+|.+++.|-.+
T Consensus       240 dl~ma~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~  279 (298)
T KOG3128|consen  240 DLHMADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLV  279 (298)
T ss_pred             cchhhcCCcccccceeeecccchHHHHHHHHHhhcceEEe
Confidence            999988763 2      222221 2467778888776543

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.80  E-value=2e-19  Score=164.66  Aligned_cols=176  Identities=17%  Similarity=0.163  Sum_probs=138.4

Q ss_pred             CceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhhc
Q 010855          197 GHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAE  276 (499)
Q Consensus       197 ~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~  276 (499)
                      .+-+|+||.|+|++..+.|+.|+.+....+                      ....++.                     
T Consensus        15 ~~~aVcFDvDSTvi~eEgIdelA~~~G~~~----------------------~Va~~T~---------------------   51 (227)
T KOG1615|consen   15 SADAVCFDVDSTVIQEEGIDELAAYCGVGE----------------------AVAEVTR---------------------   51 (227)
T ss_pred             hcCeEEEecCcchhHHhhHHHHHHHhCchH----------------------HHHHHHH---------------------
Confidence            344999999999999999999998764321                      1111221                     


Q ss_pred             CCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHh--hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChH
Q 010855          277 FEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWAS--QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGD  354 (499)
Q Consensus       277 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~--~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~  354 (499)
                      ..|.+...|+++|       ..|+   .+|+| +..++.++.  ++..|.||.++|+..|+++|   ..++++|+|| ..
T Consensus        52 rAMng~~~F~eaL-------~~Rl---~llqp-~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~---~~v~liSGGF-~~  116 (227)
T KOG1615|consen   52 RAMNGEADFQEAL-------AARL---SLLQP-LQVQVEQFVIKQKPTLTPGIRELVSRLHARG---TQVYLISGGF-RQ  116 (227)
T ss_pred             HHhCCCCcHHHHH-------HHHH---HHhcc-cHHHHHHHHhcCCCccCCCHHHHHHHHHHcC---CeEEEEcCCh-HH
Confidence            2344444544444       4566   78899 556666664  37899999999999999999   9999999999 78


Q ss_pred             HHHHHHHcCCCCceEEEeeceEee-CCeeec-cccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcC
Q 010855          355 LIRSAFASGDLNAFRVHSNELVYE-ESISTG-EIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD  432 (499)
Q Consensus       355 ~I~~~L~~~gl~~~~I~aN~l~~~-~g~~tG-~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Ad  432 (499)
                      +|.++..+.|++...|+||.|.|+ +|.++| ....+...+.+|..+++.+++..+   ...+++||||.||++|+.-|+
T Consensus       117 ~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk~~~---~~~~~mvGDGatDlea~~pa~  193 (227)
T KOG1615|consen  117 LIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNYN---YKTIVMVGDGATDLEAMPPAD  193 (227)
T ss_pred             HHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHhCCC---hheeEEecCCccccccCCchh
Confidence            999999999998888999999997 488776 566677778899999999987543   356889999999999999987


Q ss_pred             c
Q 010855          433 I  433 (499)
Q Consensus       433 i  433 (499)
                      .
T Consensus       194 a  194 (227)
T KOG1615|consen  194 A  194 (227)
T ss_pred             h
Confidence            3

>PRK11590 hypothetical protein; Provisional

Probab=99.77  E-value=2.3e-17  Score=158.73  Aligned_cols=129  Identities=10%  Similarity=0.016  Sum_probs=105.0

Q ss_pred             ccCCCHHHHHHHhh--------cCCCChhHHHHHH-HHHHcCCCcccEEEEeccCChHHHHHHHHcCCC-CceEEEeece
Q 010855          306 LKGLNLEDIKWASQ--------HLIFQDGCRRFFQ-NTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDL-NAFRVHSNEL  375 (499)
Q Consensus       306 f~Gi~~~~l~~~~~--------~i~lr~G~~efl~-~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl-~~~~I~aN~l  375 (499)
                      +.|++.+++.+..+        .+.+.||+.+.++ .++++|   +++.|+|++. ..+++++++..++ ..++++|+++
T Consensus        71 ~~g~~~~~~~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G---~~l~IvSas~-~~~~~~il~~l~~~~~~~~i~t~l  146 (211)
T PRK11590         71 TFGHSEARLQALEADFVRWFRDNVTAFPVVQERLTTYLLSSD---ADVWLITGSP-QPLVEQVYFDTPWLPRVNLIASQM  146 (211)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHccccccCceEEEEE
Confidence            44667666655432        2577999999995 566678   8999999996 6789999988763 3478999999


Q ss_pred             EeeCCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHh
Q 010855          376 VYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRR  445 (499)
Q Consensus       376 ~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~  445 (499)
                      ++   .+||.+.+.+|.|..|++++++++..    .....++||||.+|++||..|+.++++++++.|.+
T Consensus       147 ~~---~~tg~~~g~~c~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~  209 (211)
T PRK11590        147 QR---RYGGWVLTLRCLGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQ  209 (211)
T ss_pred             EE---EEccEECCccCCChHHHHHHHHHhCC----CcceEEEecCCcccHHHHHhCCCCEEECccHHhhc
Confidence            77   68899999999999999999998842    23456799999999999999999999999988864

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.76  E-value=2.5e-17  Score=156.06  Aligned_cols=134  Identities=19%  Similarity=0.151  Sum_probs=106.7

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeC-Ceeeccc
Q 010855          308 GLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEE-SISTGEI  386 (499)
Q Consensus       308 Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~-g~~tG~~  386 (499)
                      ....+++.+..+++.++||+.+++++|+++|   ++++|||+|+ ..+++.+++..|+  ..+++|.+.+++ |..+|..
T Consensus        66 ~~~~~~~~~~~~~~~~~~g~~e~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~g~--~~~~~~~~~~~~~g~~~p~~  139 (201)
T TIGR01491        66 RLRREEVEEIFKEISLRDYAEELVRWLKEKG---LKTAIVSGGI-MCLAKKVAEKLNP--DYVYSNELVFDEKGFIQPDG  139 (201)
T ss_pred             CCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHhCC--CeEEEEEEEEcCCCeEecce
Confidence            3466778777788999999999999999999   9999999997 7899999998775  568899888854 5656531


Q ss_pred             cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhhh
Q 010855          387 VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDH  449 (499)
Q Consensus       387 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~  449 (499)
                      .. .+...+|...++++++..+.+ ..+++|||||.+|++|+..||+++++++++.|+++++.
T Consensus       140 ~~-~~~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~  200 (201)
T TIGR01491       140 IV-RVTFDNKGEAVERLKRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD  200 (201)
T ss_pred             ee-EEccccHHHHHHHHHHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence            11 122346878888887765543 46899999999999999999999999888888877653

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.76  E-value=2.4e-17  Score=154.33  Aligned_cols=122  Identities=15%  Similarity=0.115  Sum_probs=99.4

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeC-Ceeec
Q 010855          308 GLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEE-SISTG  384 (499)
Q Consensus       308 Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~-g~~tG  384 (499)
                      +++.+++.+...+++++||+.++++.++++|   ++++|+|++- ...++.++++.++..  ..|+||++.+++ |.+++
T Consensus        58 ~~~~~~~~~~~~~~~l~~g~~~ll~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~  133 (188)
T TIGR01489        58 GLKEDEILEVLKSAPIDPGFKEFIAFIKEHG---IDFIVISDGN-DFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIV  133 (188)
T ss_pred             CCCHHHHHHHHHhCCCCccHHHHHHHHHHcC---CcEEEEeCCc-HHHHHHHHHHcCChhheeEEeccCceECCCCcEEE
Confidence            5677888888888999999999999999999   9999999984 778999998887753  479999999975 66665


Q ss_pred             cccc-----cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          385 EIVN-----KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       385 ~~~~-----~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      ....     +...|.+|..+++++....    +.++||||||.+|+++++.||  ++|++
T Consensus       134 ~~~~~~~~~~~~~g~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d--~~~ar  187 (188)
T TIGR01489       134 WPHHCHGCCSCPCGCCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSD--VVFAK  187 (188)
T ss_pred             ecCCCCccCcCCCCCCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCC--ccccC
Confidence            4332     3456778999999887642    367999999999999999998  56554

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PLN02954 phosphoserine phosphatase

Probab=99.73  E-value=5.7e-17  Score=156.80  Aligned_cols=180  Identities=18%  Similarity=0.156  Sum_probs=123.9

Q ss_pred             CceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhhc
Q 010855          197 GHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAE  276 (499)
Q Consensus       197 ~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~  276 (499)
                      ...+|+||||||||..|++..+++...                      ..+.|..+.+.|+.+.               
T Consensus        11 ~~k~viFDfDGTL~~~~~~~~~~~~~g----------------------~~~~~~~~~~~~~~g~---------------   53 (224)
T PLN02954         11 SADAVCFDVDSTVCVDEGIDELAEFCG----------------------AGEAVAEWTAKAMGGS---------------   53 (224)
T ss_pred             cCCEEEEeCCCcccchHHHHHHHHHcC----------------------ChHHHHHHHHHHHCCC---------------
Confidence            345899999999999999877766321                      2345665555444321               


Q ss_pred             CCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhhc--CCCChhHHHHHHHHHHcCCCcccEEEEeccCChH
Q 010855          277 FEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQH--LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGD  354 (499)
Q Consensus       277 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~~--i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~  354 (499)
                      .++.+-.   +          .++   ..++ .+.+++.++.+.  ..++||+.+++++++++|   ++++|+|+|. ..
T Consensus        54 ~~~~~~~---~----------~~~---~~~~-~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~  112 (224)
T PLN02954         54 VPFEEAL---A----------ARL---SLFK-PSLSQVEEFLEKRPPRLSPGIPELVKKLRARG---TDVYLVSGGF-RQ  112 (224)
T ss_pred             CCHHHHH---H----------HHH---HHcC-CCHHHHHHHHHHccCCCCccHHHHHHHHHHCC---CEEEEECCCc-HH
Confidence            1111111   0          111   1112 245566665543  578999999999999999   9999999997 78


Q ss_pred             HHHHHHHcCCCCceEEEeeceEeeC-Ceeeccccc-cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcC
Q 010855          355 LIRSAFASGDLNAFRVHSNELVYEE-SISTGEIVN-KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD  432 (499)
Q Consensus       355 ~I~~~L~~~gl~~~~I~aN~l~~~~-g~~tG~~~~-~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Ad  432 (499)
                      +++.+++.+|++..++++|.+.+++ |..+|.... ..+.+..|...++++....+.   .++||||||.+|+++++.++
T Consensus       113 ~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~---~~~i~iGDs~~Di~aa~~~~  189 (224)
T PLN02954        113 MIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY---KTMVMIGDGATDLEARKPGG  189 (224)
T ss_pred             HHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC---CceEEEeCCHHHHHhhhcCC
Confidence            9999999988765579999999864 666764322 223456799989888876542   57999999999999988855


Q ss_pred             ccEEE
Q 010855          433 IGIVI  437 (499)
Q Consensus       433 igiv~  437 (499)
                      ..+++
T Consensus       190 ~~~~~  194 (224)
T PLN02954        190 ADLFI  194 (224)
T ss_pred             CCEEE
Confidence            54444

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.70  E-value=1.4e-16  Score=148.88  Aligned_cols=188  Identities=15%  Similarity=0.192  Sum_probs=134.8

Q ss_pred             CceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhhc
Q 010855          197 GHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAE  276 (499)
Q Consensus       197 ~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~  276 (499)
                      ++++++||||.||...|+-..+.+.+..                      ......+.+.|-                  
T Consensus        12 ~ril~~FDFD~TIid~dSD~wVv~~lp~----------------------~~l~~qL~~t~p------------------   51 (256)
T KOG3120|consen   12 PRILLVFDFDRTIIDQDSDNWVVDELPT----------------------TDLFNQLRDTYP------------------   51 (256)
T ss_pred             CcEEEEEecCceeecCCcchHHHHhccc----------------------chhHHHHHHhcc------------------
Confidence            7899999999999999998887775321                      001111111111                  


Q ss_pred             CCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHH
Q 010855          277 FEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLI  356 (499)
Q Consensus       277 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I  356 (499)
                                   ..+|.....||.++--=+|++.++|++..+.+++.||+.++++.+.+.|.  .++.|||.. ...||
T Consensus        52 -------------~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~lik~~ak~g~--~eliIVSDa-NsfFI  115 (256)
T KOG3120|consen   52 -------------KGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVRLIKSAAKLGC--FELIIVSDA-NSFFI  115 (256)
T ss_pred             -------------cchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHHHHHHHHhCCC--ceEEEEecC-chhHH
Confidence                         12455555566554334689999999999999999999999999999983  499999997 47899


Q ss_pred             HHHHHcCCCC--ceEEEeeceEeeC-Ceee-cccc----c-cCCChhhhHHHHHHHHhhcCCC--CCceEEEEcCCcccH
Q 010855          357 RSAFASGDLN--AFRVHSNELVYEE-SIST-GEIV----N-KLESPLEKLQAFNDILKDHSND--EQNLTVYIGGSPGDL  425 (499)
Q Consensus       357 ~~~L~~~gl~--~~~I~aN~l~~~~-g~~t-G~~~----~-~~~~g~~K~~~l~~~~~~~~~~--~~~~vIyiGDs~tDl  425 (499)
                      +.+|+++++.  ...|++|...++. |.+. -++.    + .+....||..+|.++....-.+  .++++||+|||.||+
T Consensus       116 e~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~  195 (256)
T KOG3120|consen  116 EEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDF  195 (256)
T ss_pred             HHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCc
Confidence            9999999874  3479999998875 5432 2222    2 3455689999999887543111  245899999999999


Q ss_pred             HHHHhcC-ccEEEcCC
Q 010855          426 LCLLEAD-IGIVIGSS  440 (499)
Q Consensus       426 ~~l~~Ad-igiv~~~~  440 (499)
                      |+.+.-. --+++.++
T Consensus       196 CP~l~Lr~~D~ampRk  211 (256)
T KOG3120|consen  196 CPVLRLRACDVAMPRK  211 (256)
T ss_pred             CcchhcccCceecccC
Confidence            9765532 13677665

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.60  E-value=2.8e-14  Score=135.96  Aligned_cols=119  Identities=24%  Similarity=0.206  Sum_probs=96.0

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEee-CCeeeccc
Q 010855          308 GLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYE-ESISTGEI  386 (499)
Q Consensus       308 Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~-~g~~tG~~  386 (499)
                      |++.+++....+.+.+.||+.++++.++++    +++.|+|++. ..+++.+++++++  ..+++|.+.++ ++..+|.-
T Consensus        54 ~~~~~~i~~~~~~~~~~pg~~e~L~~L~~~----~~~~IvS~~~-~~~~~~~l~~~gl--~~~f~~~~~~~~~~~i~~~~  126 (205)
T PRK13582         54 GLGLADIQEVIATLDPLPGAVEFLDWLRER----FQVVILSDTF-YEFAGPLMRQLGW--PTLFCHSLEVDEDGMITGYD  126 (205)
T ss_pred             CCCHHHHHHHHHhCCCCCCHHHHHHHHHhc----CCEEEEeCCc-HHHHHHHHHHcCC--chhhcceEEECCCCeEECcc
Confidence            678999999889999999999999999875    5899999997 7899999998876  35788988885 45556542


Q ss_pred             cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          387 VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       387 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                         ...+.+|...++++...     +..++|||||.+|++++..|++|++++.+.
T Consensus       127 ---~~~p~~k~~~l~~~~~~-----~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~  173 (205)
T PRK13582        127 ---LRQPDGKRQAVKALKSL-----GYRVIAAGDSYNDTTMLGEADAGILFRPPA  173 (205)
T ss_pred             ---ccccchHHHHHHHHHHh-----CCeEEEEeCCHHHHHHHHhCCCCEEECCCH
Confidence               12345788888766532     357999999999999999999999877654

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.60  E-value=4.2e-15  Score=139.60  Aligned_cols=99  Identities=20%  Similarity=0.237  Sum_probs=78.4

Q ss_pred             CCChhHH----HHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeC--CeeeccccccCCChhh
Q 010855          322 IFQDGCR----RFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEE--SISTGEIVNKLESPLE  395 (499)
Q Consensus       322 ~lr~G~~----efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~--g~~tG~~~~~~~~g~~  395 (499)
                      .++||+.    ++++.++++|   ++++|||+|. ..+|+++++..|++..+++||++ +++  +..+|.+.+..+.  +
T Consensus        85 ~~~~~~~~~~~e~i~~~~~~~---~~v~IvS~~~-~~~i~~~~~~~~i~~~~v~~~~~-~~~~~~~~~~~~~~~~~~--~  157 (192)
T PF12710_consen   85 KLFPGFIPDAMELIRELKDNG---IKVVIVSGSP-DEIIEPIAERLGIDDDNVIGNEL-FDNGGGIFTGRITGSNCG--G  157 (192)
T ss_dssp             HHCTTCHTTHHHHHHHHHHTT---SEEEEEEEEE-HHHHHHHHHHTTSSEGGEEEEEE-ECTTCCEEEEEEEEEEES--H
T ss_pred             ccCcCchhhHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCCCceEEEEEee-eecccceeeeeECCCCCC--c
Confidence            3455555    9999999999   9999999996 78999999988888788999999 754  3566776654333  7


Q ss_pred             hHHHHHHH---HhhcCCCCCceEEEEcCCcccHHHHH
Q 010855          396 KLQAFNDI---LKDHSNDEQNLTVYIGGSPGDLLCLL  429 (499)
Q Consensus       396 K~~~l~~~---~~~~~~~~~~~vIyiGDs~tDl~~l~  429 (499)
                      |..+++++   ... +. ...+++|||||.+|++||+
T Consensus       158 K~~~l~~~~~~~~~-~~-~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  158 KAEALKELYIRDEE-DI-DPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHHHHHH-TH-TCCEEEEEESSGGGHHHHH
T ss_pred             HHHHHHHHHHHhhc-CC-CCCeEEEEECCHHHHHHhC
Confidence            99999999   221 11 2468999999999999985

>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription]

Probab=99.59  E-value=1.8e-14  Score=146.09  Aligned_cols=150  Identities=17%  Similarity=0.302  Sum_probs=135.5

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchhh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPFE   83 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~~   83 (499)
                      +++.++-++++.-......+.+|+.+|.++++.+|++..+  ..+++|++++|++|+..++ .|+|              
T Consensus       369 g~ks~~i~~ie~~~~iv~~v~~e~~~h~~l~e~~Gv~~~d~~~~~~~pa~~Aysry~~d~~~~g~~--------------  434 (523)
T KOG2598|consen  369 GSKSPTIEDIEKEAVIVQHVREELVQHVRLREEYGVSDPDYLSCKKGPALRAYSRYINDTGRRGNW--------------  434 (523)
T ss_pred             cccCCcHHHHHHHhHHHHHHHhhccchHHHHHHhCCCchhhhhcCccHHHHHHHHHhhhhhcccCh--------------
Confidence            6788899989888888899999999999999999999886  4555999999999999999 5777              


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 010855           84 KIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKL  163 (499)
Q Consensus        84 ~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~  163 (499)
                           ..+..|+.|    |.++..++++..... +.++|.+|.++|++.++...++..++.++...+.+++++.+.+..+
T Consensus       435 -----~~l~~a~~p----y~~~l~~lk~~~~as-~g~vy~~w~e~~~~~~~~~ai~~g~~~l~~i~~~~~pe~~~~l~~i  504 (523)
T KOG2598|consen  435 -----QELVIALNP----YVFALDKLKDEITAS-EGSVYVEWVETYSSSWYTSAIDEGERLLEHIVETLSPEKLQTLVTI  504 (523)
T ss_pred             -----hhhhhhhch----hhHHHHHHHhhcccC-CCCceeehhhhccchhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence                 468999999    888888888754433 7899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCC
Q 010855          164 YYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       164 F~~a~~lE~~Fw~~a~~  180 (499)
                      |.++|.+|..||+.++.
T Consensus       505 ~~~~~~~Et~fw~t~~~  521 (523)
T KOG2598|consen  505 FARVTEFETLFWTTALE  521 (523)
T ss_pred             HHHHHHHHHhhcccccc
Confidence            99999999999999864

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=99.45  E-value=4.2e-12  Score=136.20  Aligned_cols=122  Identities=16%  Similarity=0.086  Sum_probs=94.6

Q ss_pred             hhccCCCHHHHHHHhh----c---CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHc-CCCCceEEEeece
Q 010855          304 GVLKGLNLEDIKWASQ----H---LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFAS-GDLNAFRVHSNEL  375 (499)
Q Consensus       304 ~~f~Gi~~~~l~~~~~----~---i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~-~gl~~~~I~aN~l  375 (499)
                      ..|+|++.+++.+.++    +   -.+++...+.+   +++|   . .+|||++. ..+++++++. .|  .+.|+|+++
T Consensus        85 ~~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~---~~~g---~-~vvVSASp-~~~Vepfa~~~LG--id~VIgTeL  154 (497)
T PLN02177         85 IAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVF---NSFG---K-RYIITASP-RIMVEPFVKTFLG--ADKVLGTEL  154 (497)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHH---HhCC---C-EEEEECCc-HHHHHHHHHHcCC--CCEEEeccc
Confidence            4689999999987763    2   23667655544   4566   3 49999986 6689998876 45  367999999


Q ss_pred             Ee-eCCeeecccccc-CCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          376 VY-EESISTGEIVNK-LESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       376 ~~-~~g~~tG~~~~~-~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +. .+|.+||.+.++ +|.|..|.+++++....   +  ...++||||.+|++||..|+.++++..+
T Consensus       155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~---~--~~~~aYgDS~sD~plL~~a~e~y~V~~~  216 (497)
T PLN02177        155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGD---A--LPDLGLGDRETDHDFMSICKEGYMVPRT  216 (497)
T ss_pred             EECcCCEEeeeecCCCCCccHHHHHHHHHHhCC---C--CceEEEECCccHHHHHHhCCccEEeCCC
Confidence            99 589999999987 57899999999865531   1  1238999999999999999999888773

>PRK08238 hypothetical protein; Validated

Probab=99.24  E-value=1.4e-10  Score=124.37  Aligned_cols=116  Identities=16%  Similarity=0.123  Sum_probs=93.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      .++++||+.++++.++++|   .++.|+|++. ..+++.++++.|+ ...++|.+..            .++.+..|...
T Consensus        70 ~lp~~pga~e~L~~lk~~G---~~v~LaTas~-~~~a~~i~~~lGl-Fd~Vigsd~~------------~~~kg~~K~~~  132 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAG---RKLVLATASD-ERLAQAVAAHLGL-FDGVFASDGT------------TNLKGAAKAAA  132 (479)
T ss_pred             hCCCChhHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCC-CCEEEeCCCc------------cccCCchHHHH
Confidence            4579999999999999999   9999999985 7789999888775 3556665321            13445568877


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhhhhCCcccccc
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~  458 (499)
                      +.+....      ...+|+|||.+|+++++.|+.++++++++.|++.+++.||+..-+.
T Consensus       133 l~~~l~~------~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~~~~~~~~~~~  185 (479)
T PRK08238        133 LVEAFGE------RGFDYAGNSAADLPVWAAARRAIVVGASPGVARAARALGPVERVFP  185 (479)
T ss_pred             HHHHhCc------cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHHHcCCcceecC
Confidence            7765531      3468999999999999999999999999999999999999877553

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.07  E-value=1.7e-08  Score=97.41  Aligned_cols=100  Identities=10%  Similarity=0.070  Sum_probs=71.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|++. ...++.+++.+++..  ..+++           +.   ......-|.
T Consensus        91 ~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~~~~-----------~~---~~~~~kp~~  152 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAG---YPLAVVTNKP-TPFVAPLLEALGIADYFSVVIG-----------GD---SLPNKKPDP  152 (226)
T ss_pred             cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCccCccEEEc-----------CC---CCCCCCcCh
Confidence            4679999999999999999   9999999996 678889998877632  11111           10   001111234


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                      ..++.++...+.. ..++++|||+.+|+.+++.+|+ .|.+.
T Consensus       153 ~~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~  193 (226)
T PRK13222        153 APLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVT  193 (226)
T ss_pred             HHHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEEC
Confidence            5566666665553 5789999999999999999997 45543

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.04  E-value=1.7e-08  Score=96.55  Aligned_cols=98  Identities=12%  Similarity=0.005  Sum_probs=71.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|++- ...++.+++..|+..  ..+++.+              ....+.-+.
T Consensus        83 ~~~~~~g~~~~L~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp~p  144 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKG---LRLGLVTNKP-TPLARPLLELLGLAKYFSVLIGGD--------------SLAQRKPHP  144 (213)
T ss_pred             cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCcHhhCcEEEecC--------------CCCCCCCCh
Confidence            4789999999999999999   9999999984 678899998877532  1222211              001112234


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                      ..+...++..+.. +.+++|||||.+|+.++..|++.++
T Consensus       145 ~~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i  182 (213)
T TIGR01449       145 DPLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSV  182 (213)
T ss_pred             HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEE
Confidence            5666666666553 5779999999999999999998443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.98  E-value=2.4e-09  Score=93.35  Aligned_cols=111  Identities=10%  Similarity=-0.038  Sum_probs=73.9

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC--ceEEEeeceEeeC-Ceeeccc-cccCCCh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN--AFRVHSNELVYEE-SISTGEI-VNKLESP  393 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~--~~~I~aN~l~~~~-g~~tG~~-~~~~~~g  393 (499)
                      .....+++|+.++++.++++|   .+++|+|+++ ...++.+++..++.  ...+++....... +...+.. ......+
T Consensus        20 ~~~~~~~~~~~~~l~~l~~~g---~~i~ivS~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~   95 (139)
T cd01427          20 IEELELYPGVKEALKELKEKG---IKLALATNKS-RREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIG   95 (139)
T ss_pred             cccCCcCcCHHHHHHHHHHCC---CeEEEEeCch-HHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccC
Confidence            445788999999999999999   9999999997 77899999887752  2345544332211 1011111 1122333


Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      ..|...++.+....+.. ...+++|||+.+|+.++..++.
T Consensus        96 ~~~~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~  134 (139)
T cd01427          96 KPNPDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGG  134 (139)
T ss_pred             CCCHHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCC
Confidence            44555555555554432 4678999999999999999764

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=98.97  E-value=1.7e-08  Score=97.53  Aligned_cols=101  Identities=11%  Similarity=0.044  Sum_probs=73.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|++- ...++.+++..++..  ..+++.+     ..         ..+.-+
T Consensus        89 ~~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~~~~~~-----~~---------~~~Kp~  150 (222)
T PRK10826         89 ETRPLLPGVREALALCKAQG---LKIGLASASP-LHMLEAVLTMFDLRDYFDALASAE-----KL---------PYSKPH  150 (222)
T ss_pred             cCCCCCCCHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHHHHhCcchhcccEEEEcc-----cC---------CCCCCC
Confidence            45789999999999999999   9999999984 678888988877532  1222211     01         112234


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG  438 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~  438 (499)
                      ...++..+...+.. +.++++||||.+|+.+++.||+..+..
T Consensus       151 ~~~~~~~~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i~v  191 (222)
T PRK10826        151 PEVYLNCAAKLGVD-PLTCVALEDSFNGMIAAKAARMRSIVV  191 (222)
T ss_pred             HHHHHHHHHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEEEe
Confidence            45677777776663 578999999999999999999854433

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=98.95  E-value=7.9e-08  Score=91.10  Aligned_cols=103  Identities=12%  Similarity=0.029  Sum_probs=73.5

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCCChhh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      ...+.+.||+.++++.++++|   +++.|+|.+. ...++..++..|+.  ...|++.+-       .|.       ..-
T Consensus        88 ~~~~~~~~~~~~~L~~L~~~g---~~~~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s~~-------~~~-------~KP  149 (198)
T TIGR01428        88 YLRLPPHPDVPAGLRALKERG---YRLAILSNGS-PAMLKSLVKHAGLDDPFDAVLSADA-------VRA-------YKP  149 (198)
T ss_pred             HhcCCCCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHCCChhhhheeEehhh-------cCC-------CCC
Confidence            346789999999999999999   9999999985 77888889887763  223433211       010       011


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      +...++..+...+.. +.++++|||+.+|+.++..+|+ .|.+.+
T Consensus       150 ~~~~~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i~v~r  193 (198)
T TIGR01428       150 APQVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVNR  193 (198)
T ss_pred             CHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence            244556666555553 5789999999999999999998 455544

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=98.94  E-value=2.8e-08  Score=95.45  Aligned_cols=97  Identities=11%  Similarity=0.053  Sum_probs=70.8

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      +.+.+.||+.+++++++++|   +++.|+|++. ...++..|+..|+..  ..|++-+           -.   ..+.-|
T Consensus        79 ~~~~~~~g~~~~l~~L~~~g---~~~~i~S~~~-~~~~~~~l~~~gl~~~f~~i~~~~-----------~~---~~~Kp~  140 (214)
T PRK13288         79 ELVTEYETVYETLKTLKKQG---YKLGIVTTKM-RDTVEMGLKLTGLDEFFDVVITLD-----------DV---EHAKPD  140 (214)
T ss_pred             hhcccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhceeEEEecC-----------cC---CCCCCC
Confidence            34678999999999999999   9999999996 678888998877642  2232211           00   011224


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      ...+++.+...+.. ..+++|||||.+|+.+++.|++.
T Consensus       141 p~~~~~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~  177 (214)
T PRK13288        141 PEPVLKALELLGAK-PEEALMVGDNHHDILAGKNAGTK  177 (214)
T ss_pred             cHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCe
Confidence            45666666655543 57899999999999999999974

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=98.93  E-value=2.8e-08  Score=95.68  Aligned_cols=98  Identities=12%  Similarity=0.059  Sum_probs=71.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC----ceEEEeeceEeeCCeeeccccccCCChhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN----AFRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~----~~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      ...+.||+.++++.++++|   +++.|+|++. ...++..|+..++.    ...++|..     ..         ..+.-
T Consensus        85 ~~~l~~G~~~~L~~L~~~g---~~~~ivT~~~-~~~~~~~l~~~~l~~~~~f~~i~~~~-----~~---------~~~KP  146 (220)
T TIGR03351        85 PPVALPGAEEAFRSLRSSG---IKVALTTGFD-RDTAERLLEKLGWTVGDDVDAVVCPS-----DV---------AAGRP  146 (220)
T ss_pred             CCccCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHHhhhhhhccCCEEEcCC-----cC---------CCCCC
Confidence            4689999999999999999   9999999885 77889999887754    12333321     11         01112


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      +...+...+...+...+.+++||||+.+|+.+++.||+.+
T Consensus       147 ~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~  186 (220)
T TIGR03351       147 APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA  186 (220)
T ss_pred             CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence            4456666666655422368999999999999999999865

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=98.92  E-value=2.8e-08  Score=98.87  Aligned_cols=96  Identities=14%  Similarity=0.079  Sum_probs=69.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|.+ +...++.+++.+|+..  ..|++.+     ..         ..+.-+.
T Consensus       107 ~~~l~pg~~e~L~~L~~~g---~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~ii~~~-----d~---------~~~KP~P  168 (260)
T PLN03243        107 LYRLRPGSREFVQALKKHE---IPIAVASTR-PRRYLERAIEAVGMEGFFSVVLAAE-----DV---------YRGKPDP  168 (260)
T ss_pred             CcccCCCHHHHHHHHHHCC---CEEEEEeCc-CHHHHHHHHHHcCCHhhCcEEEecc-----cC---------CCCCCCH
Confidence            4678999999999999999   999999998 5778899998887632  2333321     00         0111233


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      ..+...+...+.. ..+++|||||.+|+.+++.|++.
T Consensus       169 e~~~~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~  204 (260)
T PLN03243        169 EMFMYAAERLGFI-PERCIVFGNSNSSVEAAHDGCMK  204 (260)
T ss_pred             HHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCE
Confidence            4555555555543 47899999999999999999984

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=98.90  E-value=7.5e-09  Score=98.50  Aligned_cols=89  Identities=13%  Similarity=0.111  Sum_probs=69.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhh--H
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEK--L  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~  397 (499)
                      ..++|||+.++++.|++.|   +++.|+|+. +......+++..|+....|+++..               ..+..|  .
T Consensus       125 ~d~~~~~~~~~l~~L~~~G---i~~~i~TGD-~~~~a~~~~~~lgi~~~~v~a~~~---------------~kP~~k~~~  185 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAG---IKVAILTGD-NESTASAIAKQLGIFDSIVFARVI---------------GKPEPKIFL  185 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTT---EEEEEEESS-EHHHHHHHHHHTTSCSEEEEESHE---------------TTTHHHHHH
T ss_pred             cCcchhhhhhhhhhhhccC---cceeeeecc-cccccccccccccccccccccccc---------------ccccchhHH
Confidence            4589999999999999999   999999976 366788888888874444555432               245678  6


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD  432 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Ad  432 (499)
                      ++++++...     +..+++||||.||++|++.||
T Consensus       186 ~~i~~l~~~-----~~~v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  186 RIIKELQVK-----PGEVAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             HHHHHHTCT-----GGGEEEEESSGGHHHHHHHSS
T ss_pred             HHHHHHhcC-----CCEEEEEccCHHHHHHHHhCc
Confidence            666665421     358999999999999999997

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=98.89  E-value=3.4e-08  Score=94.21  Aligned_cols=99  Identities=15%  Similarity=0.102  Sum_probs=72.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ..+.+.||+.+++++++++|   +++.|+|.+- ...++..++..|+..  ..+++.+          .    ...+.-|
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g---~~~~i~Sn~~-~~~~~~~l~~~~l~~~f~~i~~~~----------~----~~~~KP~  133 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADG---VGTAIATGKS-GPRARSLLEALGLLPLFDHVIGSD----------E----VPRPKPA  133 (205)
T ss_pred             cccccCCCHHHHHHHHHHCC---CeEEEEeCCc-hHHHHHHHHHcCChhheeeEEecC----------c----CCCCCCC
Confidence            46889999999999999999   9999999984 678888888877632  2222211          0    0111224


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                      ...+.+.++..+.+ +.+++||||+.+|+.+++.+++.++
T Consensus       134 ~~~~~~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i  172 (205)
T TIGR01454       134 PDIVREALRLLDVP-PEDAVMVGDAVTDLASARAAGTATV  172 (205)
T ss_pred             hHHHHHHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEE
Confidence            56677777666553 5789999999999999999998433

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=98.86  E-value=6.2e-08  Score=94.34  Aligned_cols=97  Identities=11%  Similarity=0.036  Sum_probs=69.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc-e-EEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA-F-RVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~-~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.|+++|   +++.|+|.+ +..++...++.+++.. + .|++.+     .  .+       .+.-+.
T Consensus        93 ~~~~~pg~~~~L~~L~~~g---~~l~i~Tn~-~~~~~~~~l~~~~l~~~f~~i~~~~-----~--~~-------~~KP~p  154 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAG---CVWGIVTNK-PEYLARLILPQLGWEQRCAVLIGGD-----T--LA-------ERKPHP  154 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCchhcccEEEecC-----c--CC-------CCCCCH
Confidence            5789999999999999999   999999988 4677888888777532 1 122211     0  01       111234


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ..+...+...+.+ +.++++|||+.+|+.+++.||+..
T Consensus       155 ~~~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~  191 (229)
T PRK13226        155 LPLLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPS  191 (229)
T ss_pred             HHHHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcE
Confidence            5556666555553 578999999999999999999743

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=98.86  E-value=1.1e-07  Score=95.14  Aligned_cols=95  Identities=11%  Similarity=0.139  Sum_probs=68.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|++ +...++.+++..++..  ..|++.           .-.   ....-+.
T Consensus        99 ~~~~~~g~~e~L~~Lk~~g---~~l~ivTn~-~~~~~~~~l~~~~i~~~f~~i~~~-----------d~~---~~~Kp~p  160 (272)
T PRK13223         99 LTVVYPGVRDTLKWLKKQG---VEMALITNK-PERFVAPLLDQMKIGRYFRWIIGG-----------DTL---PQKKPDP  160 (272)
T ss_pred             CCccCCCHHHHHHHHHHCC---CeEEEEECC-cHHHHHHHHHHcCcHhhCeEEEec-----------CCC---CCCCCCc
Confidence            4678999999999999999   999999987 4668888888776532  112221           100   1112234


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      ..++.++...+.+ ..++++|||+.+|+.++..+++
T Consensus       161 ~~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi  195 (272)
T PRK13223        161 AALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGV  195 (272)
T ss_pred             HHHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCC
Confidence            5566666665553 5789999999999999999997

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=98.82  E-value=2.3e-07  Score=89.28  Aligned_cols=101  Identities=15%  Similarity=0.085  Sum_probs=71.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.||+.++++.++++|   +++.|+|.+. ...+...++..|+..  ..|++.+    +   .|       .+.-+.
T Consensus        92 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~~----~---~~-------~~KP~~  153 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESG---YRLGIITDGL-PVKQWEKLERLGVRDFFDAVITSE----E---EG-------VEKPHP  153 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHhCChHHhccEEEEec----c---CC-------CCCCCH
Confidence            5789999999999999999   9999999985 567777888877632  2233221    0   01       011233


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~~  439 (499)
                      +.++..+...+.+ +.++++||||. +|+.+++.+++ .|.+..
T Consensus       154 ~~~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~~  196 (221)
T TIGR02253       154 KIFYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWINQ  196 (221)
T ss_pred             HHHHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence            4556666655553 47899999998 99999999997 455544

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=98.82  E-value=1.2e-07  Score=94.97  Aligned_cols=94  Identities=16%  Similarity=0.251  Sum_probs=70.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc-eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA-FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~-~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ..+.+.||+.++++.++++|   +++.|+|.+. ...+...++.+|+.. +..          +.++...      ..|.
T Consensus       139 ~~~~l~pg~~e~L~~L~~~g---i~laIvSn~~-~~~~~~~L~~~gl~~~F~~----------vi~~~~~------~~k~  198 (273)
T PRK13225        139 PALQLFPGVADLLAQLRSRS---LCLGILSSNS-RQNIEAFLQRQGLRSLFSV----------VQAGTPI------LSKR  198 (273)
T ss_pred             ccCCcCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhheEE----------EEecCCC------CCCH
Confidence            35788999999999999999   9999999995 789999999887632 111          1111110      1245


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      ..+..++...+.. +.+++|||||.+|+.+++.|++
T Consensus       199 ~~~~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~  233 (273)
T PRK13225        199 RALSQLVAREGWQ-PAAVMYVGDETRDVEAARQVGL  233 (273)
T ss_pred             HHHHHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCC
Confidence            6666666655543 4689999999999999999997

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=98.79  E-value=1.6e-07  Score=87.64  Aligned_cols=95  Identities=13%  Similarity=0.005  Sum_probs=65.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.||+.++++.++++|   +++.|+|.+   ..++..++..|+..  ..+++..          .. +   ....+.
T Consensus        86 ~~~~~~g~~~~l~~l~~~g---~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~----------~~-~---~~kp~~  145 (185)
T TIGR02009        86 GAEVLPGIENFLKRLKKKG---IAVGLGSSS---KNADRILAKLGLTDYFDAIVDAD----------EV-K---EGKPHP  145 (185)
T ss_pred             CCCCCcCHHHHHHHHHHcC---CeEEEEeCc---hhHHHHHHHcChHHHCCEeeehh----------hC-C---CCCCCh
Confidence            4789999999999999999   999999987   45788888777531  2233211          00 0   011123


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ..+...++..+.. +.++++|||+.+|+.+++.+++..
T Consensus       146 ~~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~  182 (185)
T TIGR02009       146 ETFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFA  182 (185)
T ss_pred             HHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeE
Confidence            3445555554443 578999999999999999999743

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=98.78  E-value=9.8e-08  Score=99.18  Aligned_cols=100  Identities=10%  Similarity=0.058  Sum_probs=71.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++|+.|+++|   +++.|+|.+- ...++..++..|+..  ..|++-+-     +         ..+.-+.
T Consensus       214 ~~~l~pGa~ElL~~Lk~~G---iklaIaSn~~-~~~~~~~L~~lgL~~yFd~Iv~sdd-----v---------~~~KP~P  275 (381)
T PLN02575        214 IYRLRTGSQEFVNVLMNYK---IPMALVSTRP-RKTLENAIGSIGIRGFFSVIVAAED-----V---------YRGKPDP  275 (381)
T ss_pred             CCCcCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCHHHceEEEecCc-----C---------CCCCCCH
Confidence            4678999999999999999   9999999884 778999999887642  23333210     0         0111234


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIG  438 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~  438 (499)
                      ..+.......+. .+.++++||||.+|+.+++.|++. |.+.
T Consensus       276 eifl~A~~~lgl-~Peecl~IGDS~~DIeAAk~AGm~~IgV~  316 (381)
T PLN02575        276 EMFIYAAQLLNF-IPERCIVFGNSNQTVEAAHDARMKCVAVA  316 (381)
T ss_pred             HHHHHHHHHcCC-CcccEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence            455555555554 357899999999999999999984 3443

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=98.77  E-value=2.9e-07  Score=90.81  Aligned_cols=98  Identities=6%  Similarity=-0.093  Sum_probs=68.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc---eEEEeeceEeeCCeeeccccccCCChhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA---FRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      +...+.||+.++|+.|+++|   +++.|+|++ +...++.+|+..|+..   ..|++.+     ..         ..+.-
T Consensus        96 ~~~~~~pg~~e~L~~L~~~g---~~l~IvT~~-~~~~~~~~l~~~gl~~~f~d~ii~~~-----~~---------~~~KP  157 (253)
T TIGR01422        96 EYSSPIPGVIEVIAYLRARG---IKIGSTTGY-TREMMDVVAPEAALQGYRPDYNVTTD-----DV---------PAGRP  157 (253)
T ss_pred             hcCccCCCHHHHHHHHHHCC---CeEEEECCC-cHHHHHHHHHHHHhcCCCCceEEccc-----cC---------CCCCC
Confidence            35789999999999999999   999999988 4778888888766532   1222211     00         01111


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      +...+...+...+...+.+++|||||.+|+.+++.|++.
T Consensus       158 ~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~  196 (253)
T TIGR01422       158 APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW  196 (253)
T ss_pred             CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence            234445555555432246799999999999999999973

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=98.77  E-value=7.8e-08  Score=87.77  Aligned_cols=97  Identities=18%  Similarity=0.217  Sum_probs=72.7

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   ++++|+|.+ +...++..++.+|+.  ...|++..          .    ......+
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~---~~~~i~Sn~-~~~~~~~~l~~~~~~~~f~~i~~~~----------~----~~~~Kp~  135 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKG---IPLVIVSNG-SRERIERVLERLGLDDYFDEIISSD----------D----VGSRKPD  135 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTT---SEEEEEESS-EHHHHHHHHHHTTHGGGCSEEEEGG----------G----SSSSTTS
T ss_pred             hccchhhhhhhhhhhccccc---ceeEEeecC-Ccccccccccccccccccccccccc----------h----hhhhhhH
Confidence            57899999999999999899   999999988 578899999988764  22343321          0    0111223


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      ...++.+++..+.. +.++++|||+..|+.+++.+|+.
T Consensus       136 ~~~~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~  172 (176)
T PF13419_consen  136 PDAYRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIK  172 (176)
T ss_dssp             HHHHHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSE
T ss_pred             HHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCe
Confidence            45667777665553 57899999999999999999973

...

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=98.74  E-value=4.9e-07  Score=90.07  Aligned_cols=97  Identities=5%  Similarity=-0.099  Sum_probs=67.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc---eEEEeeceEeeCCeeeccccccCCChhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA---FRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      +.+.+.||+.++|+.|+++|   +++.|+|++. ...++.+++..++..   ..|++.+     .         ...+.-
T Consensus        98 ~~~~~~pg~~elL~~L~~~g---~~l~I~T~~~-~~~~~~~l~~~~l~~~~~d~i~~~~-----~---------~~~~KP  159 (267)
T PRK13478         98 DYATPIPGVLEVIAALRARG---IKIGSTTGYT-REMMDVVVPLAAAQGYRPDHVVTTD-----D---------VPAGRP  159 (267)
T ss_pred             hcCCCCCCHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHHhhcCCCceEEEcCC-----c---------CCCCCC
Confidence            35788999999999999999   9999999885 677888887654321   1222211     0         001112


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      +...+...+...+.....+++|||||.+|+.+++.|++
T Consensus       160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~  197 (267)
T PRK13478        160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM  197 (267)
T ss_pred             ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence            34455666665554323679999999999999999997

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=98.74  E-value=4.9e-07  Score=87.86  Aligned_cols=98  Identities=13%  Similarity=0.117  Sum_probs=71.4

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      ...+.+.||+.++++.++++|   +++.|+|.+ +...++..++..|+..  ..|++.+-          +.    .+.-
T Consensus        89 ~~~~~~~~g~~e~L~~Lk~~g---~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~iv~s~~----------~~----~~KP  150 (224)
T PRK14988         89 GPRAVLREDTVPFLEALKASG---KRRILLTNA-HPHNLAVKLEHTGLDAHLDLLLSTHT----------FG----YPKE  150 (224)
T ss_pred             hccCCcCCCHHHHHHHHHhCC---CeEEEEeCc-CHHHHHHHHHHCCcHHHCCEEEEeee----------CC----CCCC
Confidence            456889999999999999999   999999988 4778888888777532  23444321          00    0111


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      +...+....+..+. .+.+++|||||..|+.+++.||+.
T Consensus       151 ~p~~~~~~~~~~~~-~p~~~l~igDs~~di~aA~~aG~~  188 (224)
T PRK14988        151 DQRLWQAVAEHTGL-KAERTLFIDDSEPILDAAAQFGIR  188 (224)
T ss_pred             CHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHcCCe
Confidence            34555665555555 357899999999999999999985

>PRK11587 putative phosphatase; Provisional

Probab=98.73  E-value=1.7e-07  Score=90.51  Aligned_cols=101  Identities=12%  Similarity=0.030  Sum_probs=67.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCce-EEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAF-RVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ..+.+.||+.++++.|+++|   +++.|+|.+- ...+...+...++... .|++.+          .+.    ...-+.
T Consensus        80 ~~~~~~pg~~e~L~~L~~~g---~~~~ivTn~~-~~~~~~~l~~~~l~~~~~i~~~~----------~~~----~~KP~p  141 (218)
T PRK11587         80 EGITALPGAIALLNHLNKLG---IPWAIVTSGS-VPVASARHKAAGLPAPEVFVTAE----------RVK----RGKPEP  141 (218)
T ss_pred             cCceeCcCHHHHHHHHHHcC---CcEEEEcCCC-chHHHHHHHhcCCCCccEEEEHH----------Hhc----CCCCCc
Confidence            46789999999999999999   9999999984 4566667766665321 222211          000    001122


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIG  438 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~  438 (499)
                      ..+.......+.. +.+++|||||.+|+.+++.|++. |.+.
T Consensus       142 ~~~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~  182 (218)
T PRK11587        142 DAYLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN  182 (218)
T ss_pred             HHHHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC
Confidence            3444444444442 57899999999999999999984 4443

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=98.73  E-value=2.1e-07  Score=91.87  Aligned_cols=98  Identities=10%  Similarity=-0.014  Sum_probs=70.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  ..|++.+-     .         ..+.-+.
T Consensus       106 ~~~l~pgv~e~L~~L~~~g---~~l~I~Tn~~-~~~~~~~l~~~gl~~~Fd~iv~~~~-----~---------~~~KP~p  167 (248)
T PLN02770        106 QLKPLNGLYKLKKWIEDRG---LKRAAVTNAP-RENAELMISLLGLSDFFQAVIIGSE-----C---------EHAKPHP  167 (248)
T ss_pred             cCCcCccHHHHHHHHHHcC---CeEEEEeCCC-HHHHHHHHHHcCChhhCcEEEecCc-----C---------CCCCCCh
Confidence            5789999999999999999   9999999985 778999999887642  23333221     0         0111123


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                      ..+...+...+.+ +.+++||||+..|+.+++.|++.++
T Consensus       168 ~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i  205 (248)
T PLN02770        168 DPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVV  205 (248)
T ss_pred             HHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEE
Confidence            4445555544442 5789999999999999999997433

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=98.70  E-value=3.6e-07  Score=85.24  Aligned_cols=94  Identities=9%  Similarity=0.020  Sum_probs=64.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++|+.++++|   +++.|+|.+..   ....++..++..  ..+++..          .    ...+.-+.
T Consensus        85 ~~~~~pg~~~~L~~L~~~g---~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~----------~----~~~~kp~p  144 (185)
T TIGR01990        85 PADVLPGIKNLLDDLKKNN---IKIALASASKN---APTVLEKLGLIDYFDAIVDPA----------E----IKKGKPDP  144 (185)
T ss_pred             CcccCccHHHHHHHHHHCC---CeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehh----------h----cCCCCCCh
Confidence            3578899999999999999   99999998753   345677766531  2222211          0    00111244


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      +.++..++..+.+ +.++++|||+.+|+.+++.+++.
T Consensus       145 ~~~~~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~  180 (185)
T TIGR01990       145 EIFLAAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMF  180 (185)
T ss_pred             HHHHHHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCE
Confidence            5555566555542 57899999999999999999973

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK09449 dUMP phosphatase; Provisional

Probab=98.69  E-value=2e-06  Score=83.01  Aligned_cols=100  Identities=13%  Similarity=0.193  Sum_probs=69.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.||+.++++.|+ +|   +++.|+|.+. ...++..++..|+..  ..|++.+    +   .|       ...-+.
T Consensus        93 ~~~~~~g~~~~L~~L~-~~---~~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~v~~~~----~---~~-------~~KP~p  153 (224)
T PRK09449         93 ICTPLPGAVELLNALR-GK---VKMGIITNGF-TELQQVRLERTGLRDYFDLLVISE----Q---VG-------VAKPDV  153 (224)
T ss_pred             cCccCccHHHHHHHHH-hC---CeEEEEeCCc-HHHHHHHHHhCChHHHcCEEEEEC----c---cC-------CCCCCH
Confidence            4679999999999999 57   8999999986 678888888877632  2232211    0   00       111234


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCcc-EEEc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIG-IVIG  438 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adig-iv~~  438 (499)
                      ..+...+...+.....++++|||+. +|+.+++.||+. |.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~  196 (224)
T PRK09449        154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLN  196 (224)
T ss_pred             HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence            5566666655532235799999998 799999999984 4443

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=98.68  E-value=1.7e-06  Score=82.25  Aligned_cols=93  Identities=14%  Similarity=0.071  Sum_probs=63.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ..+.||+.++++.++++|   +++.|+|.+ .. .++..++..|+..  ..|++..     .  .|       .+.-+..
T Consensus       104 ~~~~~g~~~~l~~L~~~g---~~~~i~Sn~-~~-~~~~~l~~~~l~~~fd~i~~s~-----~--~~-------~~KP~~~  164 (203)
T TIGR02252       104 WQVYPDAIKLLKDLRERG---LILGVISNF-DS-RLRGLLEALGLLEYFDFVVTSY-----E--VG-------AEKPDPK  164 (203)
T ss_pred             ceeCcCHHHHHHHHHHCC---CEEEEEeCC-ch-hHHHHHHHCCcHHhcceEEeec-----c--cC-------CCCCCHH
Confidence            468899999999999999   999999976 33 4577788776531  2233211     0  01       0111234


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI  433 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi  433 (499)
                      .+...+...+.+ +.++++|||+. +|+.+++.+|+
T Consensus       165 ~~~~~~~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~  199 (203)
T TIGR02252       165 IFQEALERAGIS-PEEALHIGDSLRNDYQGARAAGW  199 (203)
T ss_pred             HHHHHHHHcCCC-hhHEEEECCCchHHHHHHHHcCC
Confidence            556666655543 57899999997 89999999986

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=98.65  E-value=1.8e-06  Score=82.07  Aligned_cols=109  Identities=9%  Similarity=0.059  Sum_probs=71.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcC-CCC--ceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASG-DLN--AFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~-gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ..+.||+.++++.++++|   ++++|+|.+- ...+...+... ++.  ...|++..          .    ...+.-+.
T Consensus        83 ~~~~~g~~e~L~~l~~~g---~~~~i~Sn~~-~~~~~~~~~~~~~l~~~fd~v~~s~----------~----~~~~KP~p  144 (199)
T PRK09456         83 VALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEVRAAADHIYLSQ----------D----LGMRKPEA  144 (199)
T ss_pred             hccCHHHHHHHHHHHhCC---CcEEEEcCCc-hhhHHHHHhhchhHHHhcCEEEEec----------c----cCCCCCCH
Confidence            468999999999999999   9999999884 44444444332 221  11222211          0    01111244


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCCchHHhhhh
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSSSSLRRLGD  448 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~~~L~~~~~  448 (499)
                      ..+...++..+.. +.+++||||+..|+.+++.+|+ .|.+.+...+.++.+
T Consensus       145 ~~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~  195 (199)
T PRK09456        145 RIYQHVLQAEGFS-AADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFA  195 (199)
T ss_pred             HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence            5666666665553 5789999999999999999998 555655556665544

>PLN02940 riboflavin kinase

Probab=98.65  E-value=7.4e-07  Score=93.50  Aligned_cols=100  Identities=11%  Similarity=0.060  Sum_probs=70.8

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHH-cCCCC--ceEEEeeceEeeCCeeeccccccCCChhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFA-SGDLN--AFRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~-~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      +++.+.||+.++++.|+++|   +++.|+|.+. ...++..+. ..++.  ...|+|.+-              ...+.-
T Consensus        90 ~~~~l~pGv~elL~~Lk~~g---~~l~IvTn~~-~~~~~~~l~~~~gl~~~Fd~ii~~d~--------------v~~~KP  151 (382)
T PLN02940         90 CNIKALPGANRLIKHLKSHG---VPMALASNSP-RANIEAKISCHQGWKESFSVIVGGDE--------------VEKGKP  151 (382)
T ss_pred             ccCCCCcCHHHHHHHHHHCC---CcEEEEeCCc-HHHHHHHHHhccChHhhCCEEEehhh--------------cCCCCC
Confidence            46788999999999999999   9999999985 667777776 45542  123333210              011112


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEE
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVI  437 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~  437 (499)
                      +.+.+...++..+.. +.++++||||.+|+.+++.|++. |.+
T Consensus       152 ~p~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v  193 (382)
T PLN02940        152 SPDIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAV  193 (382)
T ss_pred             CHHHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence            345666666666553 57899999999999999999984 444

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=98.60  E-value=2.4e-07  Score=83.98  Aligned_cols=91  Identities=9%  Similarity=0.053  Sum_probs=63.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .....||+.++++.++++|   +++.|+|.+. ...+...++.+ +.  ...|++..     .         .. +.-+.
T Consensus        62 ~~~~~~g~~e~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~-l~~~f~~i~~~~-----~---------~~-~Kp~~  121 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAG---IKLGIISNGS-LRAQKLLLRKH-LGDYFDLILGSD-----E---------FG-AKPEP  121 (154)
T ss_pred             hheeccCHHHHHHHHHHCc---CeEEEEeCCc-hHHHHHHHHHH-HHhcCcEEEecC-----C---------CC-CCcCH
Confidence            4456699999999999999   9999999996 56777777663 21  11232211     1         01 12245


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD  432 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Ad  432 (499)
                      ..+...+...+.+ + ++++|||+..|+.+++.|+
T Consensus       122 ~~~~~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       122 EIFLAALESLGLP-P-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             HHHHHHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence            6677777666653 4 8999999999999998875

HAD subfamilies caused by an overly broad single model.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=98.60  E-value=1.4e-06  Score=84.40  Aligned_cols=94  Identities=10%  Similarity=0.072  Sum_probs=68.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ..+-||..+.+..++++|   +++.|+|.. +...+..+|+++|+..  ..+++    .++ .    ...     .-...
T Consensus        88 ~~~~~gv~e~L~~L~~~g---~~l~i~T~k-~~~~~~~~l~~~gl~~~F~~i~g----~~~-~----~~~-----KP~P~  149 (220)
T COG0546          88 SRLFPGVKELLAALKSAG---YKLGIVTNK-PERELDILLKALGLADYFDVIVG----GDD-V----PPP-----KPDPE  149 (220)
T ss_pred             CccCCCHHHHHHHHHhCC---CeEEEEeCC-cHHHHHHHHHHhCCccccceEEc----CCC-C----CCC-----CcCHH
Confidence            579999999999999999   999999987 4678999999888743  22333    110 0    000     01234


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      .+...+...+.+ +.++++||||..|+.|++.|++
T Consensus       150 ~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~  183 (220)
T COG0546         150 PLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV  183 (220)
T ss_pred             HHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCC
Confidence            455555555554 4589999999999999999995

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=98.58  E-value=2.6e-07  Score=102.62  Aligned_cols=97  Identities=15%  Similarity=0.186  Sum_probs=80.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++|||..+.++.|++.|   +++.++|+.- ....+.+.++.|+  .+++++                 +++.+|.+.+
T Consensus       445 D~~Rp~a~eaI~~l~~~G---i~v~miTGD~-~~ta~~iA~~lGI--~~v~a~-----------------~~PedK~~~v  501 (675)
T TIGR01497       445 DIVKGGIKERFAQLRKMG---IKTIMITGDN-RLTAAAIAAEAGV--DDFIAE-----------------ATPEDKIALI  501 (675)
T ss_pred             ccchhHHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCC--CEEEcC-----------------CCHHHHHHHH
Confidence            389999999999999999   9999999974 6678888888776  334442                 5678999999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHh
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRR  445 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~  445 (499)
                      +++.+.     +..+.++|||.||.++|..||+||+++++..+++
T Consensus       502 ~~lq~~-----g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~ak  541 (675)
T TIGR01497       502 RQEQAE-----GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAK  541 (675)
T ss_pred             HHHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHH
Confidence            998753     3467899999999999999999999997655543

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=98.57  E-value=3.1e-07  Score=102.19  Aligned_cols=96  Identities=17%  Similarity=0.172  Sum_probs=78.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++|||.++.++.|++.|   ++++++|+- +..-.+.+.++.|+  .+++|                 .+++.+|.+++
T Consensus       444 D~~R~~~~eai~~Lr~~G---I~vvMiTGD-n~~TA~aIA~elGI--d~v~A-----------------~~~PedK~~iV  500 (679)
T PRK01122        444 DIVKPGIKERFAELRKMG---IKTVMITGD-NPLTAAAIAAEAGV--DDFLA-----------------EATPEDKLALI  500 (679)
T ss_pred             ccCchhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCC--cEEEc-----------------cCCHHHHHHHH
Confidence            378999999999999999   999999986 46677777777776  33433                 25678999999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      +++.+.     +..|.++|||.||-++|+.||+||+|+.++..+
T Consensus       501 ~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA  539 (679)
T PRK01122        501 RQEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA  539 (679)
T ss_pred             HHHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH
Confidence            998853     345679999999999999999999999765444

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=98.55  E-value=8.7e-06  Score=78.20  Aligned_cols=99  Identities=13%  Similarity=0.109  Sum_probs=68.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++    +++.|+|.++ ...++..++..++..  ..|++..    +   .|       ...-+.
T Consensus        95 ~~~~~~g~~~~L~~l~~~----~~~~i~Sn~~-~~~~~~~l~~~~l~~~fd~i~~~~----~---~~-------~~KP~~  155 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK----FRLYIVTNGV-RETQYKRLRKSGLFPFFDDIFVSE----D---AG-------IQKPDK  155 (224)
T ss_pred             cCeeCccHHHHHHHHHhc----CcEEEEeCCc-hHHHHHHHHHCCcHhhcCEEEEcC----c---cC-------CCCCCH
Confidence            468999999999999875    5899999997 678888888877632  2333211    0   00       011233


Q ss_pred             HHHHHHHhhc-CCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEc
Q 010855          398 QAFNDILKDH-SNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIG  438 (499)
Q Consensus       398 ~~l~~~~~~~-~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~  438 (499)
                      ..+...+... +.. ..++++||||. +|+.+++.+|+ .|.+.
T Consensus       156 ~~~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~  198 (224)
T TIGR02254       156 EIFNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMN  198 (224)
T ss_pred             HHHHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEEC
Confidence            4555555544 442 46899999998 79999999997 44443

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=98.54  E-value=7.7e-07  Score=95.70  Aligned_cols=93  Identities=15%  Similarity=0.167  Sum_probs=67.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.+++++++++|   +++.|+|.+ +...++..++.+++..  ..|++-+    + .     .     +..|.
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g---~~l~IvS~~-~~~~~~~~l~~~~l~~~f~~i~~~d----~-v-----~-----~~~kP  388 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENN---CSIYIASNG-LTEYLRAIVSYYDLDQWVTETFSIE----Q-I-----N-----SLNKS  388 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCC---CeEEEEeCC-chHHHHHHHHHCCcHhhcceeEecC----C-C-----C-----CCCCc
Confidence            4688999999999999999   999999998 4789999998877632  2232211    0 0     0     01233


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      ..+...+...+   ..++++||||.+|+.+++.|++.
T Consensus       389 ~~~~~al~~l~---~~~~v~VGDs~~Di~aAk~AG~~  422 (459)
T PRK06698        389 DLVKSILNKYD---IKEAAVVGDRLSDINAAKDNGLI  422 (459)
T ss_pred             HHHHHHHHhcC---cceEEEEeCCHHHHHHHHHCCCe
Confidence            45555554432   35799999999999999999974

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=98.53  E-value=4e-07  Score=101.26  Aligned_cols=96  Identities=14%  Similarity=0.174  Sum_probs=78.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++|||.++.++.|++.|   +++.++|+- ...-...+.++.|++  ++++                 .+++.+|.+++
T Consensus       440 Dp~R~~a~e~I~~Lr~~G---I~vvMiTGD-n~~TA~aIA~elGI~--~v~A-----------------~~~PedK~~iV  496 (673)
T PRK14010        440 DVIKDGLVERFRELREMG---IETVMCTGD-NELTAATIAKEAGVD--RFVA-----------------ECKPEDKINVI  496 (673)
T ss_pred             cCCcHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCc--eEEc-----------------CCCHHHHHHHH
Confidence            489999999999999999   999999986 466677777777753  3433                 25678999999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      +++.+.     +..|.++|||.||-|+|+.||+||+|+.+...+
T Consensus       497 ~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA  535 (673)
T PRK14010        497 REEQAK-----GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSA  535 (673)
T ss_pred             HHHHhC-----CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHH
Confidence            998753     345669999999999999999999999765443

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=98.52  E-value=3e-06  Score=89.94  Aligned_cols=119  Identities=13%  Similarity=0.040  Sum_probs=88.2

Q ss_pred             hhhccCCCHHHHHHHhhcC-------CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeece
Q 010855          303 SGVLKGLNLEDIKWASQHL-------IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNEL  375 (499)
Q Consensus       303 ~~~f~Gi~~~~l~~~~~~i-------~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l  375 (499)
                      .-.|+|++.+++++.++.+       -+++.   .++..+..|    .++|||++- ..++++.++.+ +..+.|+++++
T Consensus        70 ~v~f~Gl~~~die~vaRavlpkf~~~dv~~e---~~~~~~~~g----~~vVVTAsP-rvmVEpFake~-LG~D~VvGTEL  140 (498)
T PLN02499         70 FVATAGVHESEIESVARAVLPKFYMDDVDME---AWKVFSSCD----KRVVVTRMP-RVMVERFAKEH-LRADEVIGSEL  140 (498)
T ss_pred             HHHhCCCCHHHHHHHHHHHhhHHHHhhCCHH---HHHHHHcCC----eEEEEeCCH-HHHHHHHHHHh-cCCceEEeeeE
Confidence            4689999999999887632       34444   555556555    789999985 66999999873 23467889999


Q ss_pred             EeeC-CeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          376 VYEE-SISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       376 ~~~~-g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      ++.+ |.+||.+.+.+| +..|.+++++...+     ....+-+||+.+|-..+..+. ++.+
T Consensus       141 ~v~~~G~~TG~~~G~n~-~ek~~~rl~~~~g~-----~~~~vg~~~~~~~~~f~~~ck-~~~~  196 (498)
T PLN02499        141 VVNRFGFATGFIRGTDV-DQSVANRVANLFVD-----ERPQLGLGRISASSSFLSLCK-EQIH  196 (498)
T ss_pred             EEeeccEEEEEEecCcc-HHHHHHHHHHHhCc-----cCceecccCCcccchhhhhCc-eEEe
Confidence            9985 999999998766 44458888887642     134678999999998887776 4444

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=98.49  E-value=9.9e-06  Score=81.74  Aligned_cols=102  Identities=14%  Similarity=0.091  Sum_probs=67.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      +.+.||+.++++.++++|   +++.|+|.+ +...+..+++..+..  . +.+.+.+    .++.-   ...+.-+...+
T Consensus       143 ~~l~pGv~elL~~L~~~g---~~l~IvTn~-~~~~~~~~l~~~~~~--~-~~~~~~~----v~~~~---~~~~KP~p~~~  208 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAG---IKVAVCSTS-NEKAVSKIVNTLLGP--E-RAQGLDV----FAGDD---VPKKKPDPDIY  208 (286)
T ss_pred             CCchhhHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHhccc--c-ccCceEE----Eeccc---cCCCCCCHHHH
Confidence            689999999999999999   999999987 477787777654210  0 0111110    01110   00111234566


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      ...+...+.+ +.++++||||.+|+.++..+|+.++.
T Consensus       209 ~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~  244 (286)
T PLN02779        209 NLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIV  244 (286)
T ss_pred             HHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEE
Confidence            6666655553 47899999999999999999985443

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.48  E-value=2e-06  Score=84.21  Aligned_cols=90  Identities=14%  Similarity=0.160  Sum_probs=58.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCC---hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC---GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s---~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ....+++.+|++.++++|   +++.|||+...   ...++.+++.+|++...    ...     ++|.-..+  .-.+|.
T Consensus       113 s~p~~~a~elL~~l~~~G---~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f----~~i-----~~~d~~~~--~Kp~~~  178 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRG---DAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN----PVI-----FAGDKPGQ--YQYTKT  178 (237)
T ss_pred             CcchhHHHHHHHHHHHCC---CEEEEEeCCCCCcCHHHHHHHHHHhCCchhe----eEE-----ECCCCCCC--CCCCHH
Confidence            455666999999999999   99999998621   34788888888875311    111     22211111  001243


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      .++    ...     ..++||||+.+|+.+++.|++
T Consensus       179 ~~l----~~~-----~i~i~vGDs~~DI~aAk~AGi  205 (237)
T TIGR01672       179 QWI----QDK-----NIRIHYGDSDNDITAAKEAGA  205 (237)
T ss_pred             HHH----HhC-----CCeEEEeCCHHHHHHHHHCCC
Confidence            322    222     237899999999999999997

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PHA02597 30

Probab=98.47  E-value=1.6e-06  Score=82.16  Aligned_cols=101  Identities=11%  Similarity=0.049  Sum_probs=59.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      +...+.||+.++++.|++++    +.+++|.+- ...-...++..++..  .+-.  .| +.+.++...      ..|..
T Consensus        71 ~~~~~~pG~~e~L~~L~~~~----~~~i~Tn~~-~~~~~~~~~~~~l~~--~f~~--~f-~~i~~~~~~------~~kp~  134 (197)
T PHA02597         71 RYLSAYDDALDVINKLKEDY----DFVAVTALG-DSIDALLNRQFNLNA--LFPG--AF-SEVLMCGHD------ESKEK  134 (197)
T ss_pred             HhccCCCCHHHHHHHHHhcC----CEEEEeCCc-cchhHHHHhhCCHHH--hCCC--cc-cEEEEeccC------cccHH
Confidence            45679999999999998765    567777652 222222334444321  0000  01 111111111      12556


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhc--CccEEEc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA--DIGIVIG  438 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A--digiv~~  438 (499)
                      .+...+...+   ...++||||+.+|+.++..|  |+.++..
T Consensus       135 ~~~~a~~~~~---~~~~v~vgDs~~di~aA~~a~~Gi~~i~~  173 (197)
T PHA02597        135 LFIKAKEKYG---DRVVCFVDDLAHNLDAAHEALSQLPVIHM  173 (197)
T ss_pred             HHHHHHHHhC---CCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence            6666666554   35688999999999999999  9854433

2 hypothetical protein; Provisional

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=98.47  E-value=6.7e-06  Score=79.27  Aligned_cols=96  Identities=10%  Similarity=0.093  Sum_probs=67.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc-e--EEEeeceEeeCCeeeccccccCCChhhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA-F--RVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~-~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      .+.+.||+.++++.+   +   +++.|+|.+ ....+...|+..++.. +  .|++-+          .+    ....-+
T Consensus        86 ~~~~~~gv~~~L~~L---~---~~~~ivTn~-~~~~~~~~l~~~~l~~~F~~~v~~~~----------~~----~~~KP~  144 (221)
T PRK10563         86 ELEPIAGANALLESI---T---VPMCVVSNG-PVSKMQHSLGKTGMLHYFPDKLFSGY----------DI----QRWKPD  144 (221)
T ss_pred             cCCcCCCHHHHHHHc---C---CCEEEEeCC-cHHHHHHHHHhcChHHhCcceEeeHH----------hc----CCCCCC
Confidence            578899999999998   4   799999988 4678898998877632 1  122211          00    011123


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      ...+...+...+.. +..+++|||+.+|+.+++.||+.++.
T Consensus       145 p~~~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~  184 (221)
T PRK10563        145 PALMFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFY  184 (221)
T ss_pred             hHHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence            45666666666553 57899999999999999999986553

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.46  E-value=6e-07  Score=100.19  Aligned_cols=95  Identities=15%  Similarity=0.146  Sum_probs=79.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      .-.+||+..+.++.|++.|   ++++++|+- +..-.+.+.++.|+  .+++++                 ..+.+|.+.
T Consensus       535 ~D~~R~~a~~aI~~L~~~G---i~~~mLTGD-n~~~A~~iA~~lGI--d~v~Ae-----------------llPedK~~~  591 (713)
T COG2217         535 ADELRPDAKEAIAALKALG---IKVVMLTGD-NRRTAEAIAKELGI--DEVRAE-----------------LLPEDKAEI  591 (713)
T ss_pred             eCCCChhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCh--Hhhecc-----------------CCcHHHHHH
Confidence            3489999999999999999   999999986 56678888888775  455553                 345799999


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCch
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSS  442 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~  442 (499)
                      ++++.+.     +..+.+||||.||-|+|..||+||+|+.++.
T Consensus       592 V~~l~~~-----g~~VamVGDGINDAPALA~AdVGiAmG~GtD  629 (713)
T COG2217         592 VRELQAE-----GRKVAMVGDGINDAPALAAADVGIAMGSGTD  629 (713)
T ss_pred             HHHHHhc-----CCEEEEEeCCchhHHHHhhcCeeEeecCCcH
Confidence            9999853     3578899999999999999999999998653

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.44  E-value=1e-06  Score=96.98  Aligned_cols=96  Identities=16%  Similarity=0.228  Sum_probs=78.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      ...+|||+.++++.++++|   +++.|+|++- ...++.++++.|++   ++++                 ..+.+|.+.
T Consensus       403 ~d~l~~~a~e~i~~Lk~~G---i~v~ilSgd~-~~~a~~ia~~lgi~---~~~~-----------------~~p~~K~~~  458 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRG---IEPVMLTGDN-RKTAKAVAKELGIN---VRAE-----------------VLPDDKAAL  458 (562)
T ss_pred             cccccHHHHHHHHHHHHcC---CeEEEEcCCC-HHHHHHHHHHcCCc---EEcc-----------------CChHHHHHH
Confidence            4579999999999999999   9999999984 77899999988763   3332                 134589999


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      ++++...     +.+++|||||.||.++++.||+||.++....+.
T Consensus       459 v~~l~~~-----~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a  498 (562)
T TIGR01511       459 IKELQEK-----GRVVAMVGDGINDAPALAQADVGIAIGAGTDVA  498 (562)
T ss_pred             HHHHHHc-----CCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHH
Confidence            9988752     367999999999999999999999998755443

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=98.42  E-value=8.8e-06  Score=76.20  Aligned_cols=98  Identities=10%  Similarity=0.082  Sum_probs=65.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.||..++++.++  .    +++|+|.+. ...+...++..|+..  ..|++.+-.       +   .......-+.
T Consensus        82 ~~~~~~g~~~~L~~L~--~----~~~i~Tn~~-~~~~~~~l~~~gl~~~fd~i~~~~~~-------~---~~~~~~KP~p  144 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP--G----RKIIFTNGD-RAHARRALNRLGIEDCFDGIFCFDTA-------N---PDYLLPKPSP  144 (184)
T ss_pred             hCCCCHHHHHHHHhCC--C----CEEEEeCCC-HHHHHHHHHHcCcHhhhCeEEEeecc-------c---CccCCCCCCH
Confidence            4668899999999886  3    689999985 678889998877632  234332110       0   0000011234


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ..+...++..+.. +.++++|||+..|+.+++.+|+..
T Consensus       145 ~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~  181 (184)
T TIGR01993       145 QAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT  181 (184)
T ss_pred             HHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence            5566666655543 578999999999999999999743

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.42  E-value=1.2e-06  Score=79.51  Aligned_cols=104  Identities=12%  Similarity=0.027  Sum_probs=68.6

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCC--------------hHHHHHHHHcCCCCceEEEeeceEeeCCeeecccc
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--------------GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIV  387 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--------------~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~  387 (499)
                      .+.||+.++++.|+++|   +++.|+|.+-.              ...+...++..++.....+..      ....... 
T Consensus        27 ~~~~g~~~~l~~Lk~~g---~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~------~~~~~~~-   96 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAG---YTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC------PHHPADN-   96 (147)
T ss_pred             EEcCChHHHHHHHHHCC---CEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC------CCCCCCC-
Confidence            57899999999999999   99999998621              035666777776542211111      0000000 


Q ss_pred             ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          388 NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       388 ~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                        .....-|.+.+...+...+.+ ..+++||||+..|+.+++.+++ .|.+.
T Consensus        97 --~~~~KP~~~~~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~  145 (147)
T TIGR01656        97 --CSCRKPKPGLILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLV  145 (147)
T ss_pred             --CCCCCCCHHHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEec
Confidence              001123566777777766653 5789999999999999999997 44443

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.39  E-value=1.5e-05  Score=73.92  Aligned_cols=93  Identities=12%  Similarity=0.050  Sum_probs=63.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      +.+.||+.++++.++++|   +++.|+|.+. ... ...+.+.|+.  ...|++.+          .+    ..+.-+..
T Consensus        84 ~~~~~g~~~~l~~l~~~g---~~~~i~Tn~~-~~~-~~~~~~~~l~~~f~~i~~~~----------~~----~~~KP~~~  144 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARG---KKLALLTNSP-RDH-AVLVQELGLRDLFDVVIFSG----------DV----GRGKPDPD  144 (183)
T ss_pred             CccCcCHHHHHHHHHHCC---CeEEEEeCCc-hHH-HHHHHhcCCHHHCCEEEEcC----------CC----CCCCCCHH
Confidence            689999999999999999   9999999986 444 4444445552  12233210          00    00111234


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      .++......+.. +.++++|||+..|+.+++.+++
T Consensus       145 ~~~~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~  178 (183)
T TIGR01509       145 IYLLALKKLGLK-PEECLFVDDSPAGIEAAKAAGM  178 (183)
T ss_pred             HHHHHHHHcCCC-cceEEEEcCCHHHHHHHHHcCC
Confidence            555555555543 5789999999999999999996

HAD subfamilies caused by an overly broad single model.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=98.38  E-value=1.2e-05  Score=76.23  Aligned_cols=89  Identities=8%  Similarity=-0.047  Sum_probs=60.0

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      ..++..++++.++++|   +++.|+|++. ...++.+|+..|+..  ..+++-    ++ .  +       . .-+...+
T Consensus       107 ~~~~~~~~L~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~~f~~~~~~----~~-~--~-------~-KP~p~~~  167 (197)
T TIGR01548       107 TLLTPKGLLRELHRAP---KGMAVVTGRP-RKDAAKFLTTHGLEILFPVQIWM----ED-C--P-------P-KPNPEPL  167 (197)
T ss_pred             cccCHHHHHHHHHHcC---CcEEEECCCC-HHHHHHHHHHcCchhhCCEEEee----cC-C--C-------C-CcCHHHH
Confidence            4455699999999999   9999999985 778999999887632  112221    11 0  0       0 1133445


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhc
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEA  431 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A  431 (499)
                      ...++..+.. ..++++|||+.+|+.+++.|
T Consensus       168 ~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       168 ILAAKALGVE-ACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             HHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence            5555544443 46899999999999998764

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=98.34  E-value=1.9e-06  Score=99.61  Aligned_cols=114  Identities=14%  Similarity=0.133  Sum_probs=79.6

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEe-eceEe-eCCeee---c--cccccCCCh
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHS-NELVY-EESIST---G--EIVNKLESP  393 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~a-N~l~~-~~g~~t---G--~~~~~~~~g  393 (499)
                      -++||+..+.++.|++.|   +++.+||+- +..-...+.++.|+....+++ .++.. ++..+.   .  .+ -..+++
T Consensus       549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~V-fAr~sP  623 (903)
T PRK15122        549 DPPKESAAPAIAALRENG---VAVKVLTGD-NPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTV-FAKLTP  623 (903)
T ss_pred             CccHHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCE-EEEeCH
Confidence            489999999999999999   999999986 455667777777764222221 11110 000000   0  00 113578


Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      .+|.++++.+.+.     +..|.++|||.||.++|+.||+||+|+.++.++
T Consensus       624 e~K~~iV~~Lq~~-----G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvA  669 (903)
T PRK15122        624 LQKSRVLKALQAN-----GHTVGFLGDGINDAPALRDADVGISVDSGADIA  669 (903)
T ss_pred             HHHHHHHHHHHhC-----CCEEEEECCCchhHHHHHhCCEEEEeCcccHHH
Confidence            8999999998853     345669999999999999999999999655443

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=98.34  E-value=2.5e-06  Score=98.37  Aligned_cols=115  Identities=14%  Similarity=0.137  Sum_probs=80.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEee-ceEe-eCCeeec-----cccccCCC
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSN-ELVY-EESISTG-----EIVNKLES  392 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN-~l~~-~~g~~tG-----~~~~~~~~  392 (499)
                      .-++||+.++.++.|++.|   +++.+||+- ...-...+.++.|+...+++.. ++.- ++..+..     .+ -..++
T Consensus       513 ~Dp~R~~~~~aI~~l~~aG---I~vvmiTGD-~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~v-fAr~~  587 (867)
T TIGR01524       513 LDPPKESTKEAIAALFKNG---INVKVLTGD-NEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHI-FARLT  587 (867)
T ss_pred             eCCCchhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeE-EEECC
Confidence            3489999999999999999   999999986 4556677777777743223221 1110 0000000     00 01267


Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      +.+|.++++.+.+.     +..|.++|||.||.++|+.||+||+|+.++.++
T Consensus       588 Pe~K~~iV~~lq~~-----G~vVam~GDGvNDapALk~AdVGIAmg~gtdvA  634 (867)
T TIGR01524       588 PMQKSRIIGLLKKA-----GHTVGFLGDGINDAPALRKADVGISVDTAADIA  634 (867)
T ss_pred             HHHHHHHHHHHHhC-----CCEEEEECCCcccHHHHHhCCEEEEeCCccHHH
Confidence            88999999998753     356679999999999999999999999655443

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=98.32  E-value=2.6e-06  Score=98.53  Aligned_cols=115  Identities=14%  Similarity=0.127  Sum_probs=80.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEee-ceEe-eCCeee---c--cccccCCC
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSN-ELVY-EESIST---G--EIVNKLES  392 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN-~l~~-~~g~~t---G--~~~~~~~~  392 (499)
                      .-++||+..+.++.|++.|   +++.++|+- ...-...+.++.|+....+++. ++.. ++....   .  .+- ..++
T Consensus       548 ~Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~Vf-Ar~s  622 (902)
T PRK10517        548 LDPPKETTAPALKALKASG---VTVKILTGD-SELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLF-ARLT  622 (902)
T ss_pred             hCcchhhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEE-EEcC
Confidence            3489999999999999999   999999986 4666777777878743333221 1110 000000   0  011 1367


Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      +.+|.++++.+.+.     +..|.++|||.||.++|+.||+||+|+.....+
T Consensus       623 Pe~K~~IV~~Lq~~-----G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvA  669 (902)
T PRK10517        623 PMHKERIVTLLKRE-----GHVVGFMGDGINDAPALRAADIGISVDGAVDIA  669 (902)
T ss_pred             HHHHHHHHHHHHHC-----CCEEEEECCCcchHHHHHhCCEEEEeCCcCHHH
Confidence            88999999998853     345669999999999999999999999655433

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=98.30  E-value=4.4e-06  Score=86.36  Aligned_cols=103  Identities=16%  Similarity=0.124  Sum_probs=68.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEec----cCChHHHHH-----------HHHcCCCCceEEEeeceEeeCCeeecc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSY----CWCGDLIRS-----------AFASGDLNAFRVHSNELVYEESISTGE  385 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~----g~s~~~I~~-----------~L~~~gl~~~~I~aN~l~~~~g~~tG~  385 (499)
                      +.+.||+.++++.|+++|   +++.|+|.    |+ +.+++.           +++..++....++          +.+.
T Consensus        29 ~~l~pGV~e~L~~Lk~~G---~kL~IvTNq~g~G~-~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~----------i~~~   94 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAG---YKLVMVTNQDGLGT-DSFPQEDFDPPHNLMMQIFESQGIKFDEVL----------ICPH   94 (354)
T ss_pred             ceECcCHHHHHHHHHhCC---CeEEEEECCccccC-ccccHHHHhhHHHHHHHHHHHcCCceeeEE----------EeCC
Confidence            689999999999999999   99999998    33 334444           4444444211111          1110


Q ss_pred             c-cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          386 I-VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       386 ~-~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                      . ...+.++..|...+..++...+.+ +.+++||||+.+|+.+++.+++ .|.+.
T Consensus        95 ~~sd~~~~rKP~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~  148 (354)
T PRK05446         95 FPEDNCSCRKPKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYA  148 (354)
T ss_pred             cCcccCCCCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence            0 011223345667777777665543 5789999999999999999998 45543

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=98.29  E-value=1.6e-05  Score=76.14  Aligned_cols=107  Identities=11%  Similarity=0.068  Sum_probs=65.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHH-HHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDL-IRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~-I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      .+.+.||+.++++.|+++|   +++.|+|.++.... ....+...++.  ...|++..-       .|. .++      .
T Consensus        92 ~~~~~~~~~~~L~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~-------~~~-~KP------~  154 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKG---FKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCL-------EGL-RKP------D  154 (211)
T ss_pred             ccccChhHHHHHHHHHHCC---CeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeee-------cCC-CCC------C
Confidence            5789999999999999999   99999998753220 11112222221  122332110       000 011      1


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCCchHH
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSSSSLR  444 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~~~L~  444 (499)
                      ...+...+...+. .+.++++|||+..|+.+++.+|+ .|.+.+...+.
T Consensus       155 p~~~~~~~~~~g~-~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~  202 (211)
T TIGR02247       155 PRIYQLMLERLGV-APEECVFLDDLGSNLKPAAALGITTIKVSDEEQAI  202 (211)
T ss_pred             HHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence            3345555555544 25789999999999999999998 55555544443

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=98.28  E-value=2.8e-06  Score=96.70  Aligned_cols=114  Identities=14%  Similarity=0.107  Sum_probs=80.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEE-eeceEee-C-Ceee-cccc--------c
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVH-SNELVYE-E-SIST-GEIV--------N  388 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~-aN~l~~~-~-g~~t-G~~~--------~  388 (499)
                      -++||+..+.++.|++.|   +++.++|+- +..-.+.+.++.|+... ++ ++++.-. + ...+ .++.        -
T Consensus       441 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf  515 (755)
T TIGR01647       441 DPPRHDTKETIERARHLG---VEVKMVTGD-HLAIAKETARRLGLGTN-IYTADVLLKGDNRDDLPSGELGEMVEDADGF  515 (755)
T ss_pred             CCChhhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCC-CcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence            489999999999999999   999999986 46677788888887431 22 1111100 0 0000 0000        0


Q ss_pred             cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          389 KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       389 ~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      ..+++.+|.++++.+.+.     +..|.++|||.||.++|+.||+||+++..+..+
T Consensus       516 Ar~~Pe~K~~iV~~lq~~-----G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvA  566 (755)
T TIGR01647       516 AEVFPEHKYEIVEILQKR-----GHLVGMTGDGVNDAPALKKADVGIAVAGATDAA  566 (755)
T ss_pred             EecCHHHHHHHHHHHHhc-----CCEEEEEcCCcccHHHHHhCCeeEEecCCcHHH
Confidence            135778999999998753     356779999999999999999999998655443

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=98.28  E-value=2.4e-05  Score=73.17  Aligned_cols=94  Identities=7%  Similarity=-0.090  Sum_probs=64.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.|| .+++..+++ +   .++.|+|++. ...++..|++.++..  ..|++.+     .         .....-+.
T Consensus        86 ~~~~~~~-~e~L~~L~~-~---~~l~I~T~~~-~~~~~~~l~~~~l~~~fd~i~~~~-----~---------~~~~KP~p  145 (188)
T PRK10725         86 SVEPLPL-IEVVKAWHG-R---RPMAVGTGSE-SAIAEALLAHLGLRRYFDAVVAAD-----D---------VQHHKPAP  145 (188)
T ss_pred             cCCCccH-HHHHHHHHh-C---CCEEEEcCCc-hHHHHHHHHhCCcHhHceEEEehh-----h---------ccCCCCCh
Confidence            4556676 588888875 4   6899999986 678888898887632  2233321     0         00112244


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      +.+.......+.. +.++|||||+..|+.++..||+.
T Consensus       146 ~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~  181 (188)
T PRK10725        146 DTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMD  181 (188)
T ss_pred             HHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence            5666666665553 57899999999999999999974

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.24  E-value=1.1e-05  Score=79.14  Aligned_cols=96  Identities=18%  Similarity=0.205  Sum_probs=62.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEecc---CChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYC---WCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g---~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ...+.||+.++++.++++|   +++++||+-   -....++.+++.+|++..+.+  .+     +++|.-.    .-.+|
T Consensus       112 ~a~p~~Ga~elL~~L~~~G---~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f--~v-----il~gd~~----~K~~K  177 (237)
T PRK11009        112 FSIPKEVARQLIDMHVKRG---DSIYFITGRTATKTETVSKTLADDFHIPADNMN--PV-----IFAGDKP----GQYTK  177 (237)
T ss_pred             cCcchHHHHHHHHHHHHCC---CeEEEEeCCCCcccHHHHHHHHHHcCCCcccce--eE-----EEcCCCC----CCCCH
Confidence            3568889999999999999   999999982   124466777766777423211  11     1222211    11345


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                      ...++    ..     ..+|||||+.+|+.+++.||+ +|.+.
T Consensus       178 ~~~l~----~~-----~i~I~IGDs~~Di~aA~~AGi~~I~v~  211 (237)
T PRK11009        178 TQWLK----KK-----NIRIFYGDSDNDITAAREAGARGIRIL  211 (237)
T ss_pred             HHHHH----hc-----CCeEEEcCCHHHHHHHHHcCCcEEEEe
Confidence            55443    22     237999999999999999997 45443

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=98.24  E-value=5.4e-06  Score=96.63  Aligned_cols=114  Identities=17%  Similarity=0.119  Sum_probs=78.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEE-eeceEee-CCeee---ccc-cccCCC
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVH-SNELVYE-ESIST---GEI-VNKLES  392 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~-aN~l~~~-~g~~t---G~~-~~~~~~  392 (499)
                      -++||+..+.++.|++.|   +++.++|+- ...-...+.++.|+..  ..++ .+++..- +..+.   .+. ....++
T Consensus       578 Dplr~~~~~aI~~l~~aG---I~v~miTGD-~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~s  653 (941)
T TIGR01517       578 DPLRPGVREAVQECQRAG---ITVRMVTGD-NIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSS  653 (941)
T ss_pred             CCCchhHHHHHHHHHHCC---CEEEEECCC-ChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECC
Confidence            489999999999999999   999999986 4556667777777632  1111 1111100 00000   000 012367


Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc-CCchH
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG-SSSSL  443 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~-~~~~L  443 (499)
                      +.+|.++++.+.+.     +..|.++|||.||.+||+.||+||+++ .+...
T Consensus       654 Pe~K~~iV~~lq~~-----g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv  700 (941)
T TIGR01517       654 PLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSMGISGTEV  700 (941)
T ss_pred             HHHHHHHHHHHHHC-----CCEEEEECCCCchHHHHHhCCcceecCCCccHH
Confidence            88999999998753     346779999999999999999999998 44443

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.22  E-value=4.2e-06  Score=91.77  Aligned_cols=96  Identities=18%  Similarity=0.192  Sum_probs=77.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcc-cEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKT-DVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~-~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      .-.+|||..+.++.|+++|   + ++.|+|+.- ....+.++++.|++  +++++                 ..+.+|.+
T Consensus       360 ~d~l~~~~~e~i~~L~~~G---i~~v~vvTgd~-~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~  416 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALG---IEKVVMLTGDR-RAVAERVARELGID--EVHAE-----------------LLPEDKLE  416 (536)
T ss_pred             eccchHHHHHHHHHHHHcC---CCcEEEEcCCC-HHHHHHHHHHcCCh--hhhhc-----------------cCcHHHHH
Confidence            4589999999999999999   9 999999884 77889999988763  22221                 23458999


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc-CCchH
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG-SSSSL  443 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~-~~~~L  443 (499)
                      .++++...     ..+++|||||.||+++++.||+||.++ ..+.+
T Consensus       417 ~i~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~  457 (536)
T TIGR01512       417 IVKELREK-----YGPVAMVGDGINDAPALAAADVGIAMGASGSDV  457 (536)
T ss_pred             HHHHHHhc-----CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH
Confidence            99988753     357999999999999999999999998 44333

.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=98.19  E-value=0.0001  Score=72.20  Aligned_cols=95  Identities=6%  Similarity=-0.056  Sum_probs=60.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.||+.++++.|++ +   +++.|+|.|= ..     ++..|+..  ..|++.+          .+.    ...-+.
T Consensus       111 ~~~~~~gv~~~L~~L~~-~---~~l~i~Tn~~-~~-----~~~~gl~~~fd~i~~~~----------~~~----~~KP~p  166 (238)
T PRK10748        111 RIDVPQATHDTLKQLAK-K---WPLVAITNGN-AQ-----PELFGLGDYFEFVLRAG----------PHG----RSKPFS  166 (238)
T ss_pred             cCCCCccHHHHHHHHHc-C---CCEEEEECCC-ch-----HHHCCcHHhhceeEecc----------cCC----cCCCcH
Confidence            57888999999999986 4   6899999873 33     23445421  2232221          100    111244


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCc-cEEEcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adi-giv~~~  439 (499)
                      ..+...+...+. .+.++++|||+ ..|+.+++.+|+ .|.+.+
T Consensus       167 ~~~~~a~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~  209 (238)
T PRK10748        167 DMYHLAAEKLNV-PIGEILHVGDDLTTDVAGAIRCGMQACWINP  209 (238)
T ss_pred             HHHHHHHHHcCC-ChhHEEEEcCCcHHHHHHHHHCCCeEEEEcC
Confidence            556655555554 25789999999 599999999997 444443

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.19  E-value=4.8e-05  Score=89.49  Aligned_cols=99  Identities=15%  Similarity=0.034  Sum_probs=70.0

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC---ceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN---AFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~---~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      .+.||+.++++.|+++|   +++.|+|.+. ...++..|++.++.   ...|++.+-     .         ..+.-+.+
T Consensus       161 ~~~pG~~elL~~Lk~~G---~~l~IvSn~~-~~~~~~~L~~~gl~~~~Fd~iv~~~~-----~---------~~~KP~Pe  222 (1057)
T PLN02919        161 IGFPGALELITQCKNKG---LKVAVASSAD-RIKVDANLAAAGLPLSMFDAIVSADA-----F---------ENLKPAPD  222 (1057)
T ss_pred             ccCccHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHHHcCCChhHCCEEEECcc-----c---------ccCCCCHH
Confidence            47899999999999999   9999999885 67888889887763   123333210     0         01111345


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      .+...+...+.. +.++++|||+..|+.+++.|++ -|.+..
T Consensus       223 ~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~  263 (1057)
T PLN02919        223 IFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTT  263 (1057)
T ss_pred             HHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence            555556555553 5789999999999999999997 344443

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=98.19  E-value=6.2e-06  Score=96.72  Aligned_cols=114  Identities=13%  Similarity=0.144  Sum_probs=80.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEe-eCCeeecccc------------
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVY-EESISTGEIV------------  387 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~-~~g~~tG~~~------------  387 (499)
                      -++||+..+.++.|++.|   +++.+||+. ...-...+.++.|+.....+.+.-.. ++.+.+|.-.            
T Consensus       645 Dp~r~~v~~aI~~l~~aG---Ikv~MiTGD-~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~  720 (1053)
T TIGR01523       645 DPPRNESAGAVEKCHQAG---INVHMLTGD-FPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK  720 (1053)
T ss_pred             cCCchhHHHHHHHHHHCC---CEEEEECCC-CHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh
Confidence            489999999999999999   999999987 36677777778787322111111000 1123333210            


Q ss_pred             -----ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc-CCchH
Q 010855          388 -----NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG-SSSSL  443 (499)
Q Consensus       388 -----~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~-~~~~L  443 (499)
                           ...+++.+|.++++.+.+.     +..+.++|||.||.+||+.||+||+|+ .++..
T Consensus       721 ~~~~V~ar~sP~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v  777 (1053)
T TIGR01523       721 ALCLVIARCAPQTKVKMIEALHRR-----KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV  777 (1053)
T ss_pred             hcCeEEEecCHHHHHHHHHHHHhc-----CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence                 1236788999999988753     356779999999999999999999998 44433

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.18  E-value=7.2e-06  Score=93.13  Aligned_cols=95  Identities=14%  Similarity=0.161  Sum_probs=77.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      .-++|||+.+.++.+++.|   ++++++|+- .....+.+.++.|+.   ++++                 ..+.+|...
T Consensus       566 ~d~~r~~a~~~i~~L~~~g---i~~~llTGd-~~~~a~~ia~~lgi~---~~~~-----------------~~p~~K~~~  621 (741)
T PRK11033        566 QDTLRADARQAISELKALG---IKGVMLTGD-NPRAAAAIAGELGID---FRAG-----------------LLPEDKVKA  621 (741)
T ss_pred             ecCCchhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCC---eecC-----------------CCHHHHHHH
Confidence            3589999999999999999   999999987 467888888888753   2221                 345689999


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      ++++.+      ...+++||||.||.++|..||+||+++..+...
T Consensus       622 v~~l~~------~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a  660 (741)
T PRK11033        622 VTELNQ------HAPLAMVGDGINDAPAMKAASIGIAMGSGTDVA  660 (741)
T ss_pred             HHHHhc------CCCEEEEECCHHhHHHHHhCCeeEEecCCCHHH
Confidence            998863      246889999999999999999999998765443

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.18  E-value=1.3e-05  Score=92.44  Aligned_cols=94  Identities=17%  Similarity=0.180  Sum_probs=76.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++|||+.+.++.+++.|   +++.++|+. +....+.++++.|++  +++++                 ..+.+|.+.+
T Consensus       649 d~~r~~a~~~i~~L~~~g---i~v~~~Tgd-~~~~a~~ia~~lgi~--~~~~~-----------------~~p~~K~~~i  705 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAG---YRLVMLTGD-NPTTANAIAKEAGID--EVIAG-----------------VLPDGKAEAI  705 (834)
T ss_pred             CcchhhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCCC--EEEeC-----------------CCHHHHHHHH
Confidence            478999999999999999   999999987 466788888887763  33331                 2245799999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCch
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSS  442 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~  442 (499)
                      +++...     +.++++||||.||.+|++.||+||+++..+.
T Consensus       706 ~~l~~~-----~~~v~~vGDg~nD~~al~~Agvgia~g~g~~  742 (834)
T PRK10671        706 KRLQSQ-----GRQVAMVGDGINDAPALAQADVGIAMGGGSD  742 (834)
T ss_pred             HHHhhc-----CCEEEEEeCCHHHHHHHHhCCeeEEecCCCH
Confidence            988743     3578999999999999999999999987643

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.12  E-value=1.4e-05  Score=88.11  Aligned_cols=98  Identities=16%  Similarity=0.255  Sum_probs=77.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      +..++||+.+.++.|+++|.  +++.|+|+. .....+.++++.|++  +++++                 +.+.+|...
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~--i~v~ivTgd-~~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~~  439 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGG--IKLVMLTGD-NRSAAEAVAAELGID--EVHAE-----------------LLPEDKLAI  439 (556)
T ss_pred             cccchHhHHHHHHHHHHcCC--CeEEEEeCC-CHHHHHHHHHHhCCC--eeecc-----------------CCHHHHHHH
Confidence            46899999999999998762  689999987 467889999988762  33321                 234689999


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      ++++...     +.+++|+|||.||.++++.||+||.++..+.+.
T Consensus       440 v~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~  479 (556)
T TIGR01525       440 VKELQEE-----GGVVAMVGDGINDAPALAAADVGIAMGAGSDVA  479 (556)
T ss_pred             HHHHHHc-----CCEEEEEECChhHHHHHhhCCEeEEeCCCCHHH
Confidence            9888752     358999999999999999999999998655444

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=98.11  E-value=1.4e-05  Score=74.89  Aligned_cols=103  Identities=14%  Similarity=-0.013  Sum_probs=62.4

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccC-------C-------hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCW-------C-------GDLIRSAFASGDLNAFRVHSNELVYEESISTGEI  386 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~-------s-------~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~  386 (499)
                      +.+.||+.+++++|+++|   +++.|+|.+=       .       ...+...++..|+....++....      ..+. 
T Consensus        28 ~~~~pgv~e~L~~Lk~~g---~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~------~~~~-   97 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAG---YRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPH------HPED-   97 (181)
T ss_pred             eEECCCHHHHHHHHHHCC---CEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCC------CCCC-
Confidence            357799999999999999   9999999751       1       12344455555542222221100      0000 


Q ss_pred             cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          387 VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       387 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                        ......-+...+...+...+.. ..++++|||+.+|+.++..+++.++
T Consensus        98 --~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i  144 (181)
T PRK08942         98 --GCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPV  144 (181)
T ss_pred             --CCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEE
Confidence              0001111244555555555543 5789999999999999999997433

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.11  E-value=1.5e-05  Score=92.40  Aligned_cols=108  Identities=15%  Similarity=0.159  Sum_probs=76.0

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEE-eeceEe-eCCee---ec--cccccCCC
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVH-SNELVY-EESIS---TG--EIVNKLES  392 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~-aN~l~~-~~g~~---tG--~~~~~~~~  392 (499)
                      ++|||+.+.++.|++.|   +++.++|+- ...-...+.++.|+..  ..++ ..++.- ++...   ..  .+ ...++
T Consensus       528 p~r~~~~~~i~~l~~~G---i~v~miTGD-~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~V-far~~  602 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGG---VRIIMITGD-SQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAV-FARAS  602 (884)
T ss_pred             cchhHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeE-EEECC
Confidence            88999999999999999   999999987 4667777778877632  1111 111110 00000   00  01 11256


Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      +.+|.++++.+...     +..+.++|||.||.++++.||+||.++.
T Consensus       603 P~~K~~iv~~lq~~-----g~~v~mvGDGvND~pAl~~AdVGia~g~  644 (884)
T TIGR01522       603 PEHKMKIVKALQKR-----GDVVAMTGDGVNDAPALKLADIGVAMGQ  644 (884)
T ss_pred             HHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHHhCCeeEecCC
Confidence            78999999887753     3567899999999999999999999973

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.10  E-value=1.6e-05  Score=72.76  Aligned_cols=86  Identities=19%  Similarity=0.270  Sum_probs=68.0

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      .++.|+++|   +.+.|+|++. ...+..++++.|+.  .++.           +        ...|...+.+++...+.
T Consensus        36 ~i~~Lk~~G---~~i~IvTn~~-~~~~~~~l~~~gi~--~~~~-----------~--------~~~k~~~~~~~~~~~~~   90 (154)
T TIGR01670        36 GIRCALKSG---IEVAIITGRK-AKLVEDRCKTLGIT--HLYQ-----------G--------QSNKLIAFSDILEKLAL   90 (154)
T ss_pred             HHHHHHHCC---CEEEEEECCC-CHHHHHHHHHcCCC--EEEe-----------c--------ccchHHHHHHHHHHcCC
Confidence            688899999   9999999996 56788889888753  2221           1        02478888888877665


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                      + ...++|||||.+|+.|+..+++++++.+..
T Consensus        91 ~-~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~  121 (154)
T TIGR01670        91 A-PENVAYIGDDLIDWPVMEKVGLSVAVADAH  121 (154)
T ss_pred             C-HHHEEEECCCHHHHHHHHHCCCeEecCCcC
Confidence            3 478999999999999999999999987653

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=98.02  E-value=1.8e-05  Score=73.53  Aligned_cols=91  Identities=14%  Similarity=0.266  Sum_probs=68.1

Q ss_pred             HHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCC
Q 010855          331 FQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSND  410 (499)
Q Consensus       331 l~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~  410 (499)
                      ++.|+++|   +++.|+|.+- ...++..++.+++.  +++.       +.            ..|...++.+++..+.+
T Consensus        43 ~~~L~~~G---i~laIiT~k~-~~~~~~~l~~lgi~--~~f~-------~~------------kpkp~~~~~~~~~l~~~   97 (169)
T TIGR02726        43 VIVLQLCG---IDVAIITSKK-SGAVRHRAEELKIK--RFHE-------GI------------KKKTEPYAQMLEEMNIS   97 (169)
T ss_pred             HHHHHHCC---CEEEEEECCC-cHHHHHHHHHCCCc--EEEe-------cC------------CCCHHHHHHHHHHcCcC
Confidence            44566778   9999999995 67899999988763  2221       00            24667788888777653


Q ss_pred             CCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          411 EQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       411 ~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                       ..+++||||+.||+.|++.|++++++.+. +.++..+
T Consensus        98 -~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A  134 (169)
T TIGR02726        98 -DAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA  134 (169)
T ss_pred             -HHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence             47899999999999999999999999864 4555443

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.02  E-value=2.2e-05  Score=87.50  Aligned_cols=94  Identities=20%  Similarity=0.170  Sum_probs=76.9

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++||++...+..|++.|   ++++++++- ...-.+.+.++.|  ...|+|+                 ..+.+|.+.+
T Consensus       722 D~vr~~a~~av~~Lk~~G---i~v~mLTGD-n~~aA~svA~~VG--i~~V~ae-----------------v~P~~K~~~I  778 (951)
T KOG0207|consen  722 DQVRPDAALAVAELKSMG---IKVVMLTGD-NDAAARSVAQQVG--IDNVYAE-----------------VLPEQKAEKI  778 (951)
T ss_pred             cccchhHHHHHHHHHhcC---ceEEEEcCC-CHHHHHHHHHhhC--cceEEec-----------------cCchhhHHHH
Confidence            489999999999999999   999999984 2345677777766  3566764                 2345899999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCch
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSS  442 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~  442 (499)
                      +++..+     +..+.++|||.||-++|..||+||+++.++.
T Consensus       779 k~lq~~-----~~~VaMVGDGINDaPALA~AdVGIaig~gs~  815 (951)
T KOG0207|consen  779 KEIQKN-----GGPVAMVGDGINDAPALAQADVGIAIGAGSD  815 (951)
T ss_pred             HHHHhc-----CCcEEEEeCCCCccHHHHhhccceeeccccH
Confidence            999864     3568899999999999999999999998754

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=98.00  E-value=3e-05  Score=90.24  Aligned_cols=113  Identities=12%  Similarity=0.083  Sum_probs=76.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCC---eeec--------c-c
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEES---ISTG--------E-I  386 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g---~~tG--------~-~  386 (499)
                      -++|||..+.++.|++.|   +++.++|+- ...-...+.++.|+..  ..+...  .+.+.   ....        + .
T Consensus       536 Dplr~~v~e~I~~l~~aG---I~v~miTGD-~~~tA~~ia~~~gi~~~~~~v~~~--~~~g~~l~~~~~~~~~~~~~~~~  609 (917)
T TIGR01116       536 DPPRPEVADAIEKCRTAG---IRVIMITGD-NKETAEAICRRIGIFSPDEDVTFK--SFTGREFDEMGPAKQRAACRSAV  609 (917)
T ss_pred             CCCchhHHHHHHHHHHCC---CEEEEecCC-CHHHHHHHHHHcCCCCCCccccce--eeeHHHHhhCCHHHHHHhhhcCe
Confidence            479999999999999999   999999976 4566777777777632  111110  01100   0000        0 0


Q ss_pred             cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          387 VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       387 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      ...-+++.+|.++++.+...     +..+.++|||.||.+|++.||+||+++.....+
T Consensus       610 v~ar~~P~~K~~iV~~lq~~-----g~~va~iGDG~ND~~alk~AdVGia~g~g~~~a  662 (917)
T TIGR01116       610 LFSRVEPSHKSELVELLQEQ-----GEIVAMTGDGVNDAPALKKADIGIAMGSGTEVA  662 (917)
T ss_pred             EEEecCHHHHHHHHHHHHhc-----CCeEEEecCCcchHHHHHhCCeeEECCCCcHHH
Confidence            11235678999998877632     356668999999999999999999998654443

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=97.99  E-value=2.9e-05  Score=73.82  Aligned_cols=120  Identities=19%  Similarity=0.171  Sum_probs=92.0

Q ss_pred             ccCCCHHHHHHHhhc-CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeC-----
Q 010855          306 LKGLNLEDIKWASQH-LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEE-----  379 (499)
Q Consensus       306 f~Gi~~~~l~~~~~~-i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~-----  379 (499)
                      -.|++.++++++.+. ..|-||+.+.++.++++    ++-+|+|.++ ..+++.+....|++.-+++|+++.+|+     
T Consensus        66 ahGVt~~dlrr~sE~sa~lvPgA~etm~~l~~~----~tp~v~STSY-~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~Pe  140 (315)
T COG4030          66 AHGVTNRDLRRISELSAKLVPGAEETMATLQER----WTPVVISTSY-TQYLRRTASMIGVPRGELHGTEVDLDSIAVPE  140 (315)
T ss_pred             HhcCcHHHHHHHHHhhcccCCChHHHHHHHhcc----CCceEEeccH-HHHHHHHHHhcCCCccccccccccCccccCCh
Confidence            468999999999885 89999999999999875    7888999988 668888888878877789999988863     


Q ss_pred             C-e------------eecc--------------------ccc--cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCccc
Q 010855          380 S-I------------STGE--------------------IVN--KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGD  424 (499)
Q Consensus       380 g-~------------~tG~--------------------~~~--~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tD  424 (499)
                      + +            ..|+                    +..  +...|..|+++++.++.....+  ...+|+|||.||
T Consensus       141 eeR~E~L~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d--~sa~~VGDSItD  218 (315)
T COG4030         141 EEREELLSIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGID--FSAVVVGDSITD  218 (315)
T ss_pred             HHHHHHHHhcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCC--cceeEecCcccc
Confidence            1 0            1121                    110  2344567888888888665443  347899999999


Q ss_pred             HHHHHhcC
Q 010855          425 LLCLLEAD  432 (499)
Q Consensus       425 l~~l~~Ad  432 (499)
                      ..|++.+.
T Consensus       219 v~ml~~~r  226 (315)
T COG4030         219 VKMLEAAR  226 (315)
T ss_pred             hHHHHHhh
Confidence            99999985

>PLN02811 hydrolase

Probab=97.93  E-value=0.00016  Score=69.82  Aligned_cols=103  Identities=9%  Similarity=0.120  Sum_probs=61.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++|+.++++|   +++.|+|++....+....++..++.  ...++|.+    + .   .+    ..+.-+
T Consensus        75 ~~~~l~~gv~e~l~~L~~~g---~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~----~-~---~~----~~~KP~  139 (220)
T PLN02811         75 PTSDLMPGAERLVRHLHAKG---IPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGD----D-P---EV----KQGKPA  139 (220)
T ss_pred             hhCCCCccHHHHHHHHHHCC---CcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECC----h-h---hc----cCCCCC
Confidence            45788999999999999999   9999999885322332232222221  11233321    0 0   00    001112


Q ss_pred             HHHHHHHHhhcC---CCCCceEEEEcCCcccHHHHHhcCcc-EEE
Q 010855          397 LQAFNDILKDHS---NDEQNLTVYIGGSPGDLLCLLEADIG-IVI  437 (499)
Q Consensus       397 ~~~l~~~~~~~~---~~~~~~vIyiGDs~tDl~~l~~Adig-iv~  437 (499)
                      ...+...+...+   . .+.+++||||+..|+.+++.|++. |.+
T Consensus       140 p~~~~~a~~~~~~~~~-~~~~~v~IgDs~~di~aA~~aG~~~i~v  183 (220)
T PLN02811        140 PDIFLAAARRFEDGPV-DPGKVLVFEDAPSGVEAAKNAGMSVVMV  183 (220)
T ss_pred             cHHHHHHHHHhCCCCC-CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence            234444444332   3 247899999999999999999984 444

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.88  E-value=4.9e-05  Score=71.54  Aligned_cols=87  Identities=17%  Similarity=0.299  Sum_probs=65.2

Q ss_pred             HHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCC
Q 010855          331 FQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSND  410 (499)
Q Consensus       331 l~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~  410 (499)
                      ++.++++|   +++.|+|+.. ...++.++++.++.  .++.           |        +..|...+++++...+..
T Consensus        57 i~~L~~~G---i~v~I~T~~~-~~~v~~~l~~lgl~--~~f~-----------g--------~~~k~~~l~~~~~~~gl~  111 (183)
T PRK09484         57 IRCLLTSG---IEVAIITGRK-SKLVEDRMTTLGIT--HLYQ-----------G--------QSNKLIAFSDLLEKLAIA  111 (183)
T ss_pred             HHHHHHCC---CEEEEEeCCC-cHHHHHHHHHcCCc--eeec-----------C--------CCcHHHHHHHHHHHhCCC
Confidence            44456678   9999999985 67888999887652  2221           1        135788888888877663


Q ss_pred             CCceEEEEcCCcccHHHHHhcCccEEEcCCchH
Q 010855          411 EQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSL  443 (499)
Q Consensus       411 ~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L  443 (499)
                       ..+++|||||.+|+.|++.|++++++++...+
T Consensus       112 -~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~  143 (183)
T PRK09484        112 -PEQVAYIGDDLIDWPVMEKVGLSVAVADAHPL  143 (183)
T ss_pred             -HHHEEEECCCHHHHHHHHHCCCeEecCChhHH
Confidence             57899999999999999999998877654333

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=97.84  E-value=8.5e-05  Score=64.91  Aligned_cols=91  Identities=20%  Similarity=0.186  Sum_probs=65.2

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHH
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFN  401 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~  401 (499)
                      .|-+...+.++.+.+.    +.++|-|+-= .-.+...++-.|++...|++-                 .....|.++++
T Consensus        30 klf~ev~e~iqeL~d~----V~i~IASgDr-~gsl~~lae~~gi~~~rv~a~-----------------a~~e~K~~ii~   87 (152)
T COG4087          30 KLFSEVSETIQELHDM----VDIYIASGDR-KGSLVQLAEFVGIPVERVFAG-----------------ADPEMKAKIIR   87 (152)
T ss_pred             EEcHhhHHHHHHHHHh----heEEEecCCc-chHHHHHHHHcCCceeeeecc-----------------cCHHHHHHHHH
Confidence            4566677888888764    6888888752 336666666555443333221                 23357999999


Q ss_pred             HHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          402 DILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       402 ~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      ++.++     ++.+++||||.||.+||+.||+||+.-.
T Consensus        88 eLkk~-----~~k~vmVGnGaND~laLr~ADlGI~tiq  120 (152)
T COG4087          88 ELKKR-----YEKVVMVGNGANDILALREADLGICTIQ  120 (152)
T ss_pred             HhcCC-----CcEEEEecCCcchHHHhhhcccceEEec
Confidence            88863     4789999999999999999999987643

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.84  E-value=0.00013  Score=70.76  Aligned_cols=98  Identities=10%  Similarity=0.063  Sum_probs=66.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc-eEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA-FRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~-~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ...+.||+.++++.++++|   ++++|+|.| +....+.+++..+..+ ...+..-  |+. . .|        ..-+..
T Consensus        93 ~~~lypgv~e~L~~Lk~~G---~~l~I~Sn~-s~~~~~~~~~~~~~~~L~~~f~~~--fd~-~-~g--------~KP~p~  156 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLG---LRLAVYSSG-SVPAQKLLFGHSDAGNLTPYFSGY--FDT-T-VG--------LKTEAQ  156 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHhhccccchhhhcceE--EEe-C-cc--------cCCCHH
Confidence            4679999999999999999   999999988 5666677766532101 1111111  111 0 11        122445


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      .+..+++..+.+ +.++++|||+..|+.+++.||+.
T Consensus       157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~  191 (220)
T TIGR01691       157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLH  191 (220)
T ss_pred             HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCE
Confidence            666666665553 57899999999999999999984

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=97.83  E-value=0.00011  Score=68.59  Aligned_cols=108  Identities=13%  Similarity=0.057  Sum_probs=68.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCC--------------hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--------------GDLIRSAFASGDLNAFRVHSNELVYEESISTGEI  386 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--------------~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~  386 (499)
                      +.+.||+.++|+.|+++|   +++.|+|.+-.              ..++...+...++....++.......+   .+.+
T Consensus        25 ~~~~pgv~e~L~~Lk~~G---~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~---~~~~   98 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMG---YALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG---VEEF   98 (176)
T ss_pred             eEECCCHHHHHHHHHHCC---CEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc---cccc
Confidence            568899999999999999   99999998631              134455666655543333221110110   1111


Q ss_pred             cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          387 VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       387 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ......+.-+...+...++..+.+ ..++++|||+.+|+.++..|++..
T Consensus        99 ~~~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~  146 (176)
T TIGR00213        99 RQVCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKT  146 (176)
T ss_pred             cCCCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcE
Confidence            111112223456667766666553 578999999999999999999853

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=97.83  E-value=8.1e-05  Score=87.32  Aligned_cols=115  Identities=15%  Similarity=0.102  Sum_probs=77.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEE---EeeceE--e------eC--Ceeecc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRV---HSNELV--Y------EE--SISTGE  385 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I---~aN~l~--~------~~--g~~tG~  385 (499)
                      -++||+.++.++.|+++|   +++.++|+- ...-...+.++.|+-.  ...   +.+++.  .      ++  -+.+|.
T Consensus       567 Dplr~~v~~aI~~l~~~G---i~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~  642 (997)
T TIGR01106       567 DPPRAAVPDAVGKCRSAG---IKVIMVTGD-HPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS  642 (997)
T ss_pred             CCChHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence            489999999999999999   999999986 3556677777766521  100   000000  0      00  122321


Q ss_pred             c-------------------cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC-CchHH
Q 010855          386 I-------------------VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS-SSSLR  444 (499)
Q Consensus       386 ~-------------------~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~-~~~L~  444 (499)
                      -                   ...-+++.+|.++++.+.+.     +..+.++|||.||.+||+.||+||+++. ++..+
T Consensus       643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-----g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va  716 (997)
T TIGR01106       643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS  716 (997)
T ss_pred             HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence            1                   11124678999999988753     3456699999999999999999999984 44433

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=97.82  E-value=8.5e-05  Score=68.72  Aligned_cols=88  Identities=10%  Similarity=-0.017  Sum_probs=56.2

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      ...+.+.||+.++++.          +.|+|.+ +...+...+++.++..  ..|++.+.       .|       .+.-
T Consensus        86 ~~~~~~~~g~~~~L~~----------~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~~-------~~-------~~KP  140 (175)
T TIGR01493        86 YKNLPPWPDSAAALAR----------VAILSNA-SHWAFDQFAQQAGLPWYFDRAFSVDT-------VR-------AYKP  140 (175)
T ss_pred             HhcCCCCCchHHHHHH----------HhhhhCC-CHHHHHHHHHHCCCHHHHhhhccHhh-------cC-------CCCC
Confidence            3467899999999982          5688987 5778898998877632  12333220       00       0011


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhc
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA  431 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A  431 (499)
                      ..+.+.......+. .+.++++|||+..|+.+++.+
T Consensus       141 ~p~~f~~~~~~~~~-~p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       141 DPVVYELVFDTVGL-PPDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             CHHHHHHHHHHHCC-CHHHeEeEecChhhHHHHhcC
Confidence            23344444444444 257899999999999988653

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.81  E-value=0.0005  Score=68.53  Aligned_cols=114  Identities=12%  Similarity=0.087  Sum_probs=71.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC--hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+-||+.+|++.++++|   ++++|||..-.  .......|+.+|++...  -..+.+.+            ....|.
T Consensus       116 ~a~~ipGA~e~L~~L~~~G---~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--~d~lllr~------------~~~~K~  178 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKG---VKIFYVSNRSEKEKAATLKNLKRFGFPQAD--EEHLLLKK------------DKSSKE  178 (266)
T ss_pred             CCCcCccHHHHHHHHHHCC---CeEEEEeCCCcchHHHHHHHHHHcCcCCCC--cceEEeCC------------CCCCcH
Confidence            5678899999999999999   99999999631  23444667777764310  00111111            112466


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc--CCchHHhhhhhhCCcccccc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG--SSSSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~--~~~~L~~~~~~~gi~~~p~~  458 (499)
                      .+++.+.+.     ...+++|||..+|+......+  .. .  +...+.+....+|-+|+-|-
T Consensus       179 ~rr~~I~~~-----y~Ivl~vGD~~~Df~~~~~~~--~~-~~~r~~~v~~~~~~fG~~~i~lP  233 (266)
T TIGR01533       179 SRRQKVQKD-----YEIVLLFGDNLLDFDDFFYKD--KE-SQDRQALVLQNQEKFGKKFIILP  233 (266)
T ss_pred             HHHHHHHhc-----CCEEEEECCCHHHhhhhhccC--cc-hHHHHHHHHHHHHHhCCCeEEec
Confidence            666665542     234679999999996543332  11 2  22346677789999988653

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>smart00775 LNS2 LNS2 domain

Probab=97.80  E-value=0.00023  Score=65.46  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=61.9

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEecc-CC-hHHHHHHHHc-----CCCCceEEEeec-eEeeCCeeeccccccCCChh
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYC-WC-GDLIRSAFAS-----GDLNAFRVHSNE-LVYEESISTGEIVNKLESPL  394 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g-~s-~~~I~~~L~~-----~gl~~~~I~aN~-l~~~~g~~tG~~~~~~~~g~  394 (499)
                      +.||..++++.++++|   +++.++|+- |. ....+..|..     ++++.-.++++. -.+.+  .++++..+  ...
T Consensus        28 ~~~~~~~a~~~l~~~G---~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~--~~~e~i~~--~~~  100 (157)
T smart00775       28 THPGVAKLYRDIQNNG---YKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA--LHREVISK--KPE  100 (157)
T ss_pred             CCHHHHHHHHHHHHcC---CeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh--hhcccccC--CHH
Confidence            3688899999999999   999999984 21 1123466655     345434555432 11100  12222211  122


Q ss_pred             h-hHHHHHHHHhhcCCCCCceEE-EEcCCcccHHHHHhcCc
Q 010855          395 E-KLQAFNDILKDHSNDEQNLTV-YIGGSPGDLLCLLEADI  433 (499)
Q Consensus       395 ~-K~~~l~~~~~~~~~~~~~~vI-yiGDs~tDl~~l~~Adi  433 (499)
                      . |...++++....... ....+ .+||..+|..+-..+++
T Consensus       101 ~~K~~~l~~i~~~~~~~-~~~f~~~~gn~~~D~~~y~~~gi  140 (157)
T smart00775      101 VFKIACLRDIKSLFPPQ-GNPFYAGFGNRITDVISYSAVGI  140 (157)
T ss_pred             HHHHHHHHHHHHhcCCC-CCCEEEEeCCCchhHHHHHHcCC
Confidence            2 777888877643211 12344 58999999999999986

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=97.80  E-value=0.00017  Score=63.65  Aligned_cols=96  Identities=14%  Similarity=0.096  Sum_probs=67.5

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCC-------hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChh
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC-------GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPL  394 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s-------~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~  394 (499)
                      .+.||+.++++.++++|   ++++|+|.+..       ...++..++..++....++.          ++..      ..
T Consensus        25 ~~~~~v~~~l~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~~------~K   85 (132)
T TIGR01662        25 ILYPEVPDALAELKEAG---YKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYA----------CPHC------RK   85 (132)
T ss_pred             eeCCCHHHHHHHHHHCC---CEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEE----------CCCC------CC
Confidence            57899999999999999   99999998841       35678888887764222111          1101      11


Q ss_pred             hhHHHHHHHHhhcC-CCCCceEEEEcC-CcccHHHHHhcCc-cEEE
Q 010855          395 EKLQAFNDILKDHS-NDEQNLTVYIGG-SPGDLLCLLEADI-GIVI  437 (499)
Q Consensus       395 ~K~~~l~~~~~~~~-~~~~~~vIyiGD-s~tDl~~l~~Adi-giv~  437 (499)
                      -|...+..++...+ . .+.+++|||| +.+|+.+++.+++ .|.+
T Consensus        86 P~~~~~~~~~~~~~~~-~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~  130 (132)
T TIGR01662        86 PKPGMFLEALKRFNEI-DPEESVYVGDQDLTDLQAAKRAGLAFILV  130 (132)
T ss_pred             CChHHHHHHHHHcCCC-ChhheEEEcCCCcccHHHHHHCCCeEEEe
Confidence            24556666666653 4 3578999999 7999999999997 4443

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.75  E-value=6.9e-05  Score=87.02  Aligned_cols=109  Identities=16%  Similarity=0.160  Sum_probs=75.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCC---eeec-ccc--------
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEES---ISTG-EIV--------  387 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g---~~tG-~~~--------  387 (499)
                      .-++|++.++.++.|++.|   +++.+++|- ...--..+.++.|+....--  .+..+|.   ...+ ++.        
T Consensus       545 ~Dppr~~v~~aI~~l~~AG---I~v~MiTGD-~~~TA~aIa~~~Gi~~~~~~--~~vi~G~el~~l~~~el~~~~~~~~V  618 (917)
T COG0474         545 EDPPREDVKEAIEELREAG---IKVWMITGD-HVETAIAIAKECGIEAEAES--ALVIDGAELDALSDEELAELVEELSV  618 (917)
T ss_pred             cCCCCccHHHHHHHHHHCC---CcEEEECCC-CHHHHHHHHHHcCCCCCCCc--eeEeehHHhhhcCHHHHHHHhhhCcE
Confidence            3489999999999999999   999999975 34455555666665322100  1122211   0111 110        


Q ss_pred             ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          388 NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       388 ~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      .--+++..|.++++.+.+.     +..|-++|||.||.+||+.||+||.++.
T Consensus       619 fARvsP~qK~~IV~~lq~~-----g~vVamtGDGvNDapALk~ADVGIamg~  665 (917)
T COG0474         619 FARVSPEQKARIVEALQKS-----GHVVAMTGDGVNDAPALKAADVGIAMGG  665 (917)
T ss_pred             EEEcCHHHHHHHHHHHHhC-----CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence            1136789999999988863     3456699999999999999999999886

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=97.75  E-value=0.00096  Score=64.74  Aligned_cols=100  Identities=13%  Similarity=0.108  Sum_probs=66.4

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc-eE-EEeeceEeeCCeeeccccccCCChhh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA-FR-VHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~-~~-I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      ...+.+.||+.+++..++.+|   +++.+.|++- ...++.+|+..|+.. +. +++.     +.+..|+   +.+.   
T Consensus        82 ~~~~~~~pGv~~~l~~L~~~~---i~~avaS~s~-~~~~~~~L~~~gl~~~f~~~v~~-----~dv~~~K---P~Pd---  146 (221)
T COG0637          82 LEGLKPIPGVVELLEQLKARG---IPLAVASSSP-RRAAERVLARLGLLDYFDVIVTA-----DDVARGK---PAPD---  146 (221)
T ss_pred             hcCCCCCccHHHHHHHHHhcC---CcEEEecCCh-HHHHHHHHHHccChhhcchhccH-----HHHhcCC---CCCH---
Confidence            447899999999999999999   9999999884 668889998877531 11 1111     0111121   1111   


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                        -++.. .+..+. .+.++|.|.||.+.+.+.+.|+.-++
T Consensus       147 --~yL~A-a~~Lgv-~P~~CvviEDs~~Gi~Aa~aAGm~vv  183 (221)
T COG0637         147 --IYLLA-AERLGV-DPEECVVVEDSPAGIQAAKAAGMRVV  183 (221)
T ss_pred             --HHHHH-HHHcCC-ChHHeEEEecchhHHHHHHHCCCEEE
Confidence              12222 222222 25789999999999999999997444

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=97.68  E-value=0.00016  Score=85.43  Aligned_cols=112  Identities=11%  Similarity=0.064  Sum_probs=77.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC--ceEEEee-----------ceEee---C----
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN--AFRVHSN-----------ELVYE---E----  379 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~--~~~I~aN-----------~l~~~---~----  379 (499)
                      .-++||+..+.++.|++.|   +++.+|||- +..-...+.++.|+-  ...++.-           .+.+.   +    
T Consensus       654 ~d~lr~~~~~~I~~l~~ag---i~v~miTGD-~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (1054)
T TIGR01657       654 ENPLKPDTKEVIKELKRAS---IRTVMITGD-NPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFA  729 (1054)
T ss_pred             ecCCCccHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccc
Confidence            4589999999999999999   999999986 355556666777762  1122110           11100   0    


Q ss_pred             ------------------------Ceeecccc--------------------ccCCChhhhHHHHHHHHhhcCCCCCceE
Q 010855          380 ------------------------SISTGEIV--------------------NKLESPLEKLQAFNDILKDHSNDEQNLT  415 (499)
Q Consensus       380 ------------------------g~~tG~~~--------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~v  415 (499)
                                              -..||...                    -.-+++.+|.++++.+.+.     +..|
T Consensus       730 ~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~-----g~~V  804 (1054)
T TIGR01657       730 STQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL-----DYTV  804 (1054)
T ss_pred             cccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-----CCeE
Confidence                                    02333210                    0136788999999888752     3566


Q ss_pred             EEEcCCcccHHHHHhcCccEEEcCC
Q 010855          416 VYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       416 IyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      .++|||.||.+||+.||+||+++..
T Consensus       805 ~m~GDG~ND~~ALK~AdVGIam~~~  829 (1054)
T TIGR01657       805 GMCGDGANDCGALKQADVGISLSEA  829 (1054)
T ss_pred             EEEeCChHHHHHHHhcCcceeeccc
Confidence            7999999999999999999999853

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=97.64  E-value=0.00018  Score=78.19  Aligned_cols=87  Identities=17%  Similarity=0.167  Sum_probs=70.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++|++..+.++.+++.|   +++.++|+. .......+.+..|+     +                 ....+.+|.+.+
T Consensus       346 d~lr~~~~~~i~~l~~~g---i~~~~ltGD-~~~~a~~ia~~lgi-----~-----------------~~~~p~~K~~~v  399 (499)
T TIGR01494       346 DPLRDDAKETISELREAG---IRVIMLTGD-NVLTAKAIAKELGI-----F-----------------ARVTPEEKAALV  399 (499)
T ss_pred             CCCchhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCc-----e-----------------eccCHHHHHHHH
Confidence            489999999999999999   899999987 35555555555442     1                 125677999999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG  438 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~  438 (499)
                      +++...     +..+.++|||.||.+++..||+||+++
T Consensus       400 ~~l~~~-----g~~v~~vGDg~nD~~al~~Advgia~~  432 (499)
T TIGR01494       400 EALQKK-----GRVVAMTGDGVNDAPALKKADVGIAMG  432 (499)
T ss_pred             HHHHHC-----CCEEEEECCChhhHHHHHhCCCccccc
Confidence            988642     357889999999999999999999997

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=97.63  E-value=0.00029  Score=64.97  Aligned_cols=105  Identities=17%  Similarity=0.142  Sum_probs=70.9

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccC--------------ChHHHHHHHHcCCCCceEEE-eeceEeeCCeeecc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCW--------------CGDLIRSAFASGDLNAFRVH-SNELVYEESISTGE  385 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~--------------s~~~I~~~L~~~gl~~~~I~-aN~l~~~~g~~tG~  385 (499)
                      +.+-||..++|+.|+++|   ++++|+|..-              ....+..+|.++|+....++ |-...      .+.
T Consensus        28 ~~~~pgv~e~L~~L~~~g---~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~------~~~   98 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAG---YKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFP------DDN   98 (161)
T ss_pred             eeECCCHHHHHHHHHHCC---CeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCC------CCC
Confidence            578899999999999999   9999999741              13467788888887522232 20000      000


Q ss_pred             ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          386 IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       386 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                          .....-|...+..+.+..+.+ ..+++||||+.+|+.++..+++ +|.+..
T Consensus        99 ----~~~~KP~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~  148 (161)
T TIGR01261        99 ----CDCRKPKIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDE  148 (161)
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence                111122456666666665543 5789999999999999999998 455444

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.57  E-value=0.00026  Score=70.20  Aligned_cols=51  Identities=16%  Similarity=0.259  Sum_probs=42.5

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHH
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLR  444 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~  444 (499)
                      +.+|...++.+++..+.+ ..++++||||.||++|++.|++||++++. +.+.
T Consensus       197 ~~~K~~~l~~l~~~~gi~-~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk  248 (272)
T PRK10530        197 GNSKGKRLTQWVEAQGWS-MKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVK  248 (272)
T ss_pred             CCChHHHHHHHHHHcCCC-HHHeEEeCCChhhHHHHHhcCceEEecCchHHHH
Confidence            346999999999887764 47899999999999999999999999864 4443

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.56  E-value=7.7e-05  Score=74.11  Aligned_cols=56  Identities=14%  Similarity=0.299  Sum_probs=47.4

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGD  448 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~  448 (499)
                      .+..|...|+.+++..+.+ ..+++++|||.||++|++.|++||+|++. +.+++.|.
T Consensus       193 ~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~  249 (270)
T PRK10513        193 KRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQ  249 (270)
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcC
Confidence            4567999999999888774 57899999999999999999999999974 56665553

>PRK10976 putative hydrolase; Provisional

Probab=97.54  E-value=8.9e-05  Score=73.57  Aligned_cols=57  Identities=19%  Similarity=0.211  Sum_probs=48.1

Q ss_pred             CChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhh
Q 010855          391 ESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGD  448 (499)
Q Consensus       391 ~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~  448 (499)
                      ..+..|...|+.+++..+.+ ..+++++|||.||++|++.|++||+|++. +.+++.|.
T Consensus       186 ~~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~  243 (266)
T PRK10976        186 AGGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLP  243 (266)
T ss_pred             cCCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCC
Confidence            34567999999999888774 57899999999999999999999999974 66776654

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=97.49  E-value=0.0004  Score=77.11  Aligned_cols=108  Identities=16%  Similarity=0.136  Sum_probs=77.4

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeecc-ccc-----------
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGE-IVN-----------  388 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~-~~~-----------  388 (499)
                      -+.|++..+-++.|++.|   +++++|.+- +..--..+.++.|     ++++.-.+.+-.+||. |+.           
T Consensus       583 DPPR~ev~~ai~~c~~aG---IrV~mITGD-~~~TA~AI~r~iG-----i~~~~ed~~~~~~TG~efD~ls~~~~~~~~~  653 (972)
T KOG0202|consen  583 DPPRPEVADAIELCRQAG---IRVIMITGD-NKETAEAIAREIG-----IFSEDEDVSSMALTGSEFDDLSDEELDDAVR  653 (972)
T ss_pred             CCCchhHHHHHHHHHHcC---CEEEEEcCC-CHHHHHHHHHHhC-----CCcCCccccccccchhhhhcCCHHHHHHHhh
Confidence            489999999999999999   999999986 3555556666655     3444333333445552 210           


Q ss_pred             -----cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc-CCch
Q 010855          389 -----KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG-SSSS  442 (499)
Q Consensus       389 -----~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~-~~~~  442 (499)
                           .-+.+..|.++++.+.+.     ++-+-.-|||+||-++|+.|||||+|+ .+..
T Consensus       654 ~~~vFaR~~P~HK~kIVeaLq~~-----geivAMTGDGVNDApALK~AdIGIAMG~~GTd  708 (972)
T KOG0202|consen  654 RVLVFARAEPQHKLKIVEALQSR-----GEVVAMTGDGVNDAPALKKADIGIAMGISGTD  708 (972)
T ss_pred             cceEEEecCchhHHHHHHHHHhc-----CCEEEecCCCccchhhhhhcccceeecCCccH
Confidence                 135677899999887753     233447999999999999999999999 4443

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.43  E-value=0.00087  Score=67.21  Aligned_cols=84  Identities=26%  Similarity=0.277  Sum_probs=53.7

Q ss_pred             HHHHHcCCCCceE--EEeeceEeeC-C--eeeccccccCCC---hhhhHHHHHHHHhhcCCC-CCceEEEEcCCcccHHH
Q 010855          357 RSAFASGDLNAFR--VHSNELVYEE-S--ISTGEIVNKLES---PLEKLQAFNDILKDHSND-EQNLTVYIGGSPGDLLC  427 (499)
Q Consensus       357 ~~~L~~~gl~~~~--I~aN~l~~~~-g--~~tG~~~~~~~~---g~~K~~~l~~~~~~~~~~-~~~~vIyiGDs~tDl~~  427 (499)
                      +..+++.|+...+  -+.+-+.|.+ +  ..||-..+....   +.+|.+.++.+++.+... ..-.+|.+|||.||++|
T Consensus       162 ~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~m  241 (302)
T PRK12702        162 REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAF  241 (302)
T ss_pred             HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHH
Confidence            6667766653211  1222222322 2  246655554545   778998888777654321 23478899999999999


Q ss_pred             HHhcCccEEEcCC
Q 010855          428 LLEADIGIVIGSS  440 (499)
Q Consensus       428 l~~Adigiv~~~~  440 (499)
                      |..+|++|+|...
T Consensus       242 Le~~D~~vvi~~~  254 (302)
T PRK12702        242 LRWSEQKVVLPSP  254 (302)
T ss_pred             HHhCCeeEEecCC
Confidence            9999999999653

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.39  E-value=0.00021  Score=68.96  Aligned_cols=57  Identities=19%  Similarity=0.233  Sum_probs=46.9

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGDH  449 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~~  449 (499)
                      .+.+|...++.+++..+.+ ..++++||||.||++|++.+++||+|++. +.+...|..
T Consensus       183 ~~vsK~~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~  240 (254)
T PF08282_consen  183 KGVSKGSAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADY  240 (254)
T ss_dssp             TTSSHHHHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSE
T ss_pred             CCCCHHHHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCE
Confidence            4567999999999877664 47899999999999999999999999975 566655543

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.38  E-value=0.00016  Score=72.12  Aligned_cols=80  Identities=15%  Similarity=0.037  Sum_probs=56.1

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhhhhCCccccccchHHHHHHHhhc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGDHFGVSFVPLFSSLVERQKELVD  470 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~  470 (499)
                      .+..|...|+.+++..+.+ ..+++++|||.||++|++.|++||+|++. +.+++.|...-+.--.-..++...-+.|..
T Consensus       185 ~g~sKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~  263 (272)
T PRK15126        185 VGCNKGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD  263 (272)
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence            3457999999999988774 47899999999999999999999999975 567665542111001123455544455554


Q ss_pred             CC
Q 010855          471 GS  472 (499)
Q Consensus       471 ~~  472 (499)
                      ++
T Consensus       264 ~~  265 (272)
T PRK15126        264 YP  265 (272)
T ss_pred             CC
Confidence            43

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=97.36  E-value=0.00048  Score=72.71  Aligned_cols=92  Identities=20%  Similarity=0.268  Sum_probs=66.3

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHH-HcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAF-ASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L-~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      .+.||.+|.|..+|+-|   ++++.+.+-  ..+-...+ .+.|+  +..++                 .+++.+|.+++
T Consensus       447 ivK~Gi~ERf~elR~Mg---IkTvM~TGD--N~~TAa~IA~EAGV--DdfiA-----------------eatPEdK~~~I  502 (681)
T COG2216         447 IVKPGIKERFAELRKMG---IKTVMITGD--NPLTAAAIAAEAGV--DDFIA-----------------EATPEDKLALI  502 (681)
T ss_pred             hcchhHHHHHHHHHhcC---CeEEEEeCC--CHHHHHHHHHHhCc--hhhhh-----------------cCChHHHHHHH
Confidence            57788888888888888   888888764  23333333 33343  22222                 36778999999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCch
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSS  442 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~  442 (499)
                      ++....     +..+-..|||.||-|+|.+||+|++|..+..
T Consensus       503 ~~eQ~~-----grlVAMtGDGTNDAPALAqAdVg~AMNsGTq  539 (681)
T COG2216         503 RQEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQ  539 (681)
T ss_pred             HHHHhc-----CcEEEEcCCCCCcchhhhhcchhhhhccccH
Confidence            988753     2344589999999999999999999988753

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.34  E-value=0.00033  Score=69.42  Aligned_cols=57  Identities=23%  Similarity=0.310  Sum_probs=48.1

Q ss_pred             CChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhh
Q 010855          391 ESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGD  448 (499)
Q Consensus       391 ~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~  448 (499)
                      ..+.+|...++.+.+..+.+ ..+++++|||.||++|+..|++||+|++. +.+.+++.
T Consensus       185 ~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~  242 (264)
T COG0561         185 PKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD  242 (264)
T ss_pred             cCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence            34668999999999987774 46899999999999999999999999975 56666655

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.32  E-value=0.00022  Score=68.70  Aligned_cols=54  Identities=15%  Similarity=0.204  Sum_probs=44.9

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      +..|...++.+++..+.+ ..++++||||.||++|++.+++|++|++. +.+++.+
T Consensus       147 ~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A  201 (225)
T TIGR01482       147 GVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWA  201 (225)
T ss_pred             CCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhc
Confidence            457999999998877764 47899999999999999999999999974 5565544

catalyze the same reaction as SPP.

>PLN03190 aminophospholipid translocase; Provisional

Probab=97.28  E-value=0.0012  Score=78.42  Aligned_cols=59  Identities=20%  Similarity=0.355  Sum_probs=42.3

Q ss_pred             CChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCc-hHHhhhhhhCCc
Q 010855          391 ESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS-SLRRLGDHFGVS  453 (499)
Q Consensus       391 ~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~-~L~~~~~~~gi~  453 (499)
                      +++..|.++++-+.+..    +..+.+||||.||.+|++.|||||.+.... .-+..+..+.|+
T Consensus       854 ~sP~QKa~IV~~vk~~~----~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~  913 (1178)
T PLN03190        854 VAPLQKAGIVALVKNRT----SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG  913 (1178)
T ss_pred             CCHHHHHHHHHHHHhcC----CcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh
Confidence            57789998888776431    245779999999999999999999876642 333334444444

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.26  E-value=0.00027  Score=67.94  Aligned_cols=55  Identities=11%  Similarity=0.153  Sum_probs=45.3

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+.+|...++.+++..+.+ ..++++||||.||++|++.+++|++|++. +.+++.|
T Consensus       144 ~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A  199 (215)
T TIGR01487       144 KGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIA  199 (215)
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhC
Confidence            4567999999998877664 46799999999999999999999999975 5666554

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=97.26  E-value=0.00026  Score=64.21  Aligned_cols=91  Identities=13%  Similarity=0.083  Sum_probs=59.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc---eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA---FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      .+.+|||+.+|+++|+ ++   +++.|+|.+ +..+++.+++..++..   ..|++.     +...           ..|
T Consensus        43 ~v~l~pG~~e~L~~L~-~~---~~l~I~Ts~-~~~~~~~il~~l~~~~~~f~~i~~~-----~d~~-----------~~K  101 (148)
T smart00577       43 YVKKRPGVDEFLKRAS-EL---FELVVFTAG-LRMYADPVLDLLDPKKYFGYRRLFR-----DECV-----------FVK  101 (148)
T ss_pred             EEEECCCHHHHHHHHH-hc---cEEEEEeCC-cHHHHHHHHHHhCcCCCEeeeEEEC-----cccc-----------ccC
Confidence            4689999999999998 56   899999999 4788999998766521   112221     1110           011


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      ..+++.+ ...+. ...++|+|||+.+|+.+...+++
T Consensus       102 P~~~k~l-~~l~~-~p~~~i~i~Ds~~~~~aa~~ngI  136 (148)
T smart00577      102 GKYVKDL-SLLGR-DLSNVIIIDDSPDSWPFHPENLI  136 (148)
T ss_pred             CeEeecH-HHcCC-ChhcEEEEECCHHHhhcCccCEE
Confidence            1122211 11222 25789999999999998877763

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.24  E-value=0.00028  Score=70.50  Aligned_cols=47  Identities=23%  Similarity=0.229  Sum_probs=41.1

Q ss_pred             ChhhhHHHHHHHHhhcCC---CCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          392 SPLEKLQAFNDILKDHSN---DEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~---~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      .+.+|...++.+++..+.   + ..+++++|||.||++||+.|++||+|++
T Consensus       184 ~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~~  233 (271)
T PRK03669        184 ASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVKG  233 (271)
T ss_pred             CCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEecC
Confidence            356799999999887765   3 4789999999999999999999999984

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=97.24  E-value=0.0011  Score=78.43  Aligned_cols=112  Identities=21%  Similarity=0.162  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC--ceEE---Eeec---------------------
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN--AFRV---HSNE---------------------  374 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~--~~~I---~aN~---------------------  374 (499)
                      -++|||.++.++.|++.|   +++.+++|- ..+-...+..+.|+-  ...+   -.+.                     
T Consensus       630 D~lq~~v~etI~~L~~AG---Ikv~mlTGD-~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~  705 (1057)
T TIGR01652       630 DKLQEGVPETIELLRQAG---IKIWVLTGD-KVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEE  705 (1057)
T ss_pred             hhhhhccHHHHHHHHHCC---CeEEEEcCC-cHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHh
Confidence            489999999999999999   999999975 344444444444541  1111   1110                     


Q ss_pred             -----------eEeeCCe----eecc----c----------cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccH
Q 010855          375 -----------LVYEESI----STGE----I----------VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDL  425 (499)
Q Consensus       375 -----------l~~~~g~----~tG~----~----------~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl  425 (499)
                                 +..++..    ....    +          ..--+++.+|.++++.+.+..    +..+.++|||.||.
T Consensus       706 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~----~~~vl~iGDG~ND~  781 (1057)
T TIGR01652       706 FNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKST----GKTTLAIGDGANDV  781 (1057)
T ss_pred             hhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcC----CCeEEEEeCCCccH
Confidence                       1111110    0000    0          111356789999988777531    24677999999999


Q ss_pred             HHHHhcCccEEEcCC
Q 010855          426 LCLLEADIGIVIGSS  440 (499)
Q Consensus       426 ~~l~~Adigiv~~~~  440 (499)
                      +|++.||+||.+...
T Consensus       782 ~mlk~AdVGIgi~g~  796 (1057)
T TIGR01652       782 SMIQEADVGVGISGK  796 (1057)
T ss_pred             HHHhhcCeeeEecCh
Confidence            999999999987553

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.22  E-value=0.00032  Score=67.81  Aligned_cols=55  Identities=18%  Similarity=0.247  Sum_probs=45.2

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+..|...++.+++..+.+ ..++++||||.||++|+..+++||+|++. +.+++.|
T Consensus       154 ~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a  209 (230)
T PRK01158        154 PGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAA  209 (230)
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhc
Confidence            3457999999998877663 57899999999999999999999999874 5565544

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=97.20  E-value=0.002  Score=59.73  Aligned_cols=92  Identities=7%  Similarity=0.038  Sum_probs=62.3

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccCCh------------HHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccC
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCWCG------------DLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKL  390 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~------------~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~  390 (499)
                      +-||+.++|+.++++|   +++.|+|.+- .            ..++.+|+.+|+....+++.+    ++          
T Consensus        43 ~~pgv~e~L~~Lk~~G---~~l~I~TN~~-~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~----~~----------  104 (166)
T TIGR01664        43 LYPEIPAKLQELDDEG---YKIVIFTNQS-GIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH----AG----------  104 (166)
T ss_pred             ecCCHHHHHHHHHHCC---CEEEEEeCCc-ccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC----CC----------
Confidence            5689999999999999   9999999863 2            246778888886433333221    00          


Q ss_pred             CChhhhHHHHHHHHhhcC--CCCCceEEEEcCCc--------ccHHHHHhcCc
Q 010855          391 ESPLEKLQAFNDILKDHS--NDEQNLTVYIGGSP--------GDLLCLLEADI  433 (499)
Q Consensus       391 ~~g~~K~~~l~~~~~~~~--~~~~~~vIyiGDs~--------tDl~~l~~Adi  433 (499)
                      ....-+...+.......+  . ...+++||||+.        +|+.+++.|++
T Consensus       105 ~~~KP~p~~~~~~~~~~~~~~-~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi  156 (166)
T TIGR01664       105 LYRKPMTGMWEYLQSQYNSPI-KMTRSFYVGDAAGRKLDFSDADIKFAKNLGL  156 (166)
T ss_pred             CCCCCccHHHHHHHHHcCCCC-CchhcEEEECCCCCCCCCchhHHHHHHHCCC
Confidence            011112345566665554  3 246899999996        69999999985

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK06769 hypothetical protein; Validated

Probab=97.19  E-value=0.0015  Score=60.81  Aligned_cols=102  Identities=9%  Similarity=0.068  Sum_probs=63.4

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChH--------HHHHHHHcCCCCceEEE-eeceEeeCCeeeccccccCC
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGD--------LIRSAFASGDLNAFRVH-SNELVYEESISTGEIVNKLE  391 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~--------~I~~~L~~~gl~~~~I~-aN~l~~~~g~~tG~~~~~~~  391 (499)
                      +.+.||+.++++.|+++|   +++.|+|.+- ..        -+...++..|+.  .++ +-.       .++.   ...
T Consensus        27 ~~~~pgv~e~L~~Lk~~G---~~l~I~Tn~~-~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~-------~~~~---~~~   90 (173)
T PRK06769         27 FTLFPFTKASLQKLKANH---IKIFSFTNQP-GIADGIATIADFVQELKGFGFD--DIYLCPH-------KHGD---GCE   90 (173)
T ss_pred             eEECCCHHHHHHHHHHCC---CEEEEEECCc-hhcCCcCCHHHHHHHHHhCCcC--EEEECcC-------CCCC---CCC
Confidence            457899999999999999   9999999762 21        122235554542  221 110       0000   000


Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      ...-+...+.+.++..+. .+.+++||||+.+|+.++..|++ .|.+..
T Consensus        91 ~~KP~p~~~~~~~~~l~~-~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~  138 (173)
T PRK06769         91 CRKPSTGMLLQAAEKHGL-DLTQCAVIGDRWTDIVAAAKVNATTILVRT  138 (173)
T ss_pred             CCCCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHCCCeEEEEec
Confidence            111234556666665554 35789999999999999999997 455543

>PLN02887 hydrolase family protein

Probab=97.18  E-value=0.00037  Score=76.72  Aligned_cols=56  Identities=16%  Similarity=0.245  Sum_probs=47.4

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGD  448 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~  448 (499)
                      .+..|...|+.+++..+.+ ..++++||||.||++|++.|++||+|++. +.+++.|.
T Consensus       504 ~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad  560 (580)
T PLN02887        504 PGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVAD  560 (580)
T ss_pred             CCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCC
Confidence            4567999999999988774 57899999999999999999999999975 56665543

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.15  E-value=0.035  Score=53.25  Aligned_cols=99  Identities=14%  Similarity=0.043  Sum_probs=67.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh-
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK-  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-  396 (499)
                      .++..|++.++++.++.+    .+++|+|.|. .......|++.|+..  ..|++.+-       .|         ..| 
T Consensus        97 ~~~~~~~~~~~L~~l~~~----~~l~ilTNg~-~~~~~~~l~~~gl~~~Fd~v~~s~~-------~g---------~~KP  155 (229)
T COG1011          97 LLPDYPEALEALKELGKK----YKLGILTNGA-RPHQERKLRQLGLLDYFDAVFISED-------VG---------VAKP  155 (229)
T ss_pred             hCccChhHHHHHHHHHhh----ccEEEEeCCC-hHHHHHHHHHcCChhhhheEEEecc-------cc---------cCCC
Confidence            378888999999988765    6899999984 667888888877532  23332210       11         122 


Q ss_pred             -HHHHHHHHhhcCCCCCceEEEEcCCcccH-HHHHhcCc-cEEEcCC
Q 010855          397 -LQAFNDILKDHSNDEQNLTVYIGGSPGDL-LCLLEADI-GIVIGSS  440 (499)
Q Consensus       397 -~~~l~~~~~~~~~~~~~~vIyiGDs~tDl-~~l~~Adi-giv~~~~  440 (499)
                       .++++..+...+.+ +.++++||||.... ..+..+|. +|.+...
T Consensus       156 ~~~~f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~  201 (229)
T COG1011         156 DPEIFEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRG  201 (229)
T ss_pred             CcHHHHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCC
Confidence             24556666665553 57899999987655 99999997 6777654

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=97.14  E-value=0.0028  Score=59.20  Aligned_cols=111  Identities=5%  Similarity=-0.007  Sum_probs=67.0

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCce-EEEeeceEeeCCeeeccccccCCChhhh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAF-RVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ...+.+.||+.++++.|+++|   +++.|+|.+-....++.++...++... .-+.+.-.| +.+.++.-     ....|
T Consensus        41 ~~~~~l~pGv~elL~~Lk~~G---~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~F-d~iv~~~~-----~~~~k  111 (174)
T TIGR01685        41 GTEVTLIKEVRDVLQTLKDAG---TYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLF-DDRIEIYK-----PNKAK  111 (174)
T ss_pred             CCEEEEcccHHHHHHHHHHCC---CEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhc-eeeeeccC-----CchHH
Confidence            346789999999999999999   999999976235678888887765300 000000001 11111110     01122


Q ss_pred             H--HHHHHHHhhc--CCCCCceEEEEcCCcccHHHHHhcCccEEEc
Q 010855          397 L--QAFNDILKDH--SNDEQNLTVYIGGSPGDLLCLLEADIGIVIG  438 (499)
Q Consensus       397 ~--~~l~~~~~~~--~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~  438 (499)
                      .  ..++.+....  +. .+.+++||||+..|+.++..+++-++..
T Consensus       112 p~~~i~~~~~~~~~~gl-~p~e~l~VgDs~~di~aA~~aGi~~i~v  156 (174)
T TIGR01685       112 QLEMILQKVNKVDPSVL-KPAQILFFDDRTDNVREVWGYGVTSCYC  156 (174)
T ss_pred             HHHHHHHHhhhcccCCC-CHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence            1  1233332211  12 3578999999999999999999854443

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.11  E-value=0.0029  Score=58.75  Aligned_cols=95  Identities=9%  Similarity=0.004  Sum_probs=65.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      ...+.||+.++++.|+++|   .+++|+|.+-....+..+++..++   ..+.           +.       ..-+...
T Consensus        41 ~~~~~pgv~e~L~~Lk~~g---~~l~I~Sn~~~~~~~~~~~~~~gl---~~~~-----------~~-------~KP~p~~   96 (170)
T TIGR01668        41 HNEAYPALRDWIEELKAAG---RKLLIVSNNAGEQRAKAVEKALGI---PVLP-----------HA-------VKPPGCA   96 (170)
T ss_pred             CCCcChhHHHHHHHHHHcC---CEEEEEeCCchHHHHHHHHHHcCC---EEEc-----------CC-------CCCChHH
Confidence            3467899999999999999   999999987214566666665543   1110           10       1123345


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEcC
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~~  439 (499)
                      +...+...+.+ ..++++|||+. +|+.++..+++ .|.+..
T Consensus        97 ~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~  137 (170)
T TIGR01668        97 FRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTILVEP  137 (170)
T ss_pred             HHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEEEEcc
Confidence            56666555543 57899999998 79999999998 555544

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.03  E-value=0.00073  Score=65.09  Aligned_cols=44  Identities=30%  Similarity=0.251  Sum_probs=38.2

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      +..|...++.+++..+.+ ..++++||||.||++|+..|++||++
T Consensus       177 ~~~Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va~  220 (221)
T TIGR02463       177 SSSKGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVVI  220 (221)
T ss_pred             CCCHHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEEe
Confidence            445888999988877764 57899999999999999999999986

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.00  E-value=0.00069  Score=66.07  Aligned_cols=57  Identities=19%  Similarity=0.159  Sum_probs=46.8

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGDH  449 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~~  449 (499)
                      .+.+|...++.+++..+.+ ...++++|||.||++|+..+++||+|++. +.+++.+..
T Consensus       156 ~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~  213 (236)
T TIGR02471       156 LRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQ  213 (236)
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcC
Confidence            4567999999998877653 46899999999999999999999999874 677766553

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=96.96  E-value=0.0056  Score=56.04  Aligned_cols=105  Identities=15%  Similarity=0.144  Sum_probs=63.0

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEecc--CChHHHHHHHHcC-----CCCceEEEeece-EeeCCeeeccccccCCCh
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYC--WCGDLIRSAFASG-----DLNAFRVHSNEL-VYEESISTGEIVNKLESP  393 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g--~s~~~I~~~L~~~-----gl~~~~I~aN~l-~~~~g~~tG~~~~~~~~g  393 (499)
                      ..++|+.++++.+.++|   ..+.=+|+=  |-....+..|..+     +++.=.++.+.- .+.  -++.+...+ ..-
T Consensus        27 ~~h~g~~~l~~~i~~~G---Y~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~--al~rEvi~~-~p~  100 (157)
T PF08235_consen   27 WTHPGAAELYRKIADNG---YKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFS--ALHREVISK-DPE  100 (157)
T ss_pred             hhhhcHHHHHHHHHHCC---eEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhh--hhhcccccc-ChH
Confidence            45678888888888888   888888872  1134566666654     455444554421 110  011122211 112


Q ss_pred             hhhHHHHHHHHhhcCCCCCceEE-EEcCCcccHHHHHhcCc
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTV-YIGGSPGDLLCLLEADI  433 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vI-yiGDs~tDl~~l~~Adi  433 (499)
                      .-|...|+.++...... ....+ .+|...+|..+-..+++
T Consensus       101 ~fK~~~L~~l~~~f~~~-~~pf~agfGN~~tDv~aY~~vGi  140 (157)
T PF08235_consen  101 EFKIACLRDLRALFPPD-GNPFYAGFGNRSTDVIAYKAVGI  140 (157)
T ss_pred             HHHHHHHHHHHHhcCCC-CCeEEEecCCcHHHHHHHHHcCC
Confidence            45888898888653211 12233 69999999999999987

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=96.91  E-value=0.00093  Score=66.03  Aligned_cols=49  Identities=24%  Similarity=0.236  Sum_probs=40.4

Q ss_pred             hhhhHHHHHHHHhhcCCC-CCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          393 PLEKLQAFNDILKDHSND-EQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~-~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                      +..|...++.+++..+.+ ...+++++|||.||++|+..|++||+|++..
T Consensus       174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~  223 (256)
T TIGR01486       174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPN  223 (256)
T ss_pred             CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCC
Confidence            457888888888776542 1468999999999999999999999998753

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=96.84  E-value=0.0031  Score=57.05  Aligned_cols=84  Identities=18%  Similarity=0.285  Sum_probs=65.6

Q ss_pred             HHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCC
Q 010855          331 FQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSND  410 (499)
Q Consensus       331 l~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~  410 (499)
                      ++.+.+.|   +.+.|+|+== ..+++...+..|+..+             +.|        ..+|...+.++++..+.+
T Consensus        44 ik~l~~~G---i~vAIITGr~-s~ive~Ra~~LGI~~~-------------~qG--------~~dK~~a~~~L~~~~~l~   98 (170)
T COG1778          44 IKLLLKSG---IKVAIITGRD-SPIVEKRAKDLGIKHL-------------YQG--------ISDKLAAFEELLKKLNLD   98 (170)
T ss_pred             HHHHHHcC---CeEEEEeCCC-CHHHHHHHHHcCCcee-------------eec--------hHhHHHHHHHHHHHhCCC
Confidence            34455668   9999999864 4578888888775322             222        257999999999988874


Q ss_pred             CCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          411 EQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       411 ~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                       .+++.||||-.+|+++++.+++++++.+.
T Consensus        99 -~e~~ayiGDD~~Dlpvm~~vGls~a~~dA  127 (170)
T COG1778          99 -PEEVAYVGDDLVDLPVMEKVGLSVAVADA  127 (170)
T ss_pred             -HHHhhhhcCccccHHHHHHcCCccccccc
Confidence             68899999999999999999988887764

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=96.80  E-value=0.0014  Score=64.60  Aligned_cols=54  Identities=19%  Similarity=0.275  Sum_probs=44.3

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRL  446 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~  446 (499)
                      .+..|...++.+++..+.+ ..++++||||.||++|+..+++|+++++. +.+++.
T Consensus       185 ~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~  239 (256)
T TIGR00099       185 KGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKAL  239 (256)
T ss_pred             CCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHh
Confidence            4567999999999877663 47899999999999999999999999764 445443

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=96.75  E-value=0.0045  Score=54.70  Aligned_cols=93  Identities=11%  Similarity=-0.002  Sum_probs=62.0

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEE--EeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRV--HSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I--~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      .+.||+.++++.++++|   +++.|+|.+....++..+++..+. ...+  +...+   +.+.++.       ...|.+.
T Consensus        29 ~~~~gv~e~L~~Lk~~g---~~l~i~Sn~~~~~~~~~~l~~~~~-~~~i~~l~~~f---~~~~~~~-------~~pkp~~   94 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNG---FLLALASYNDDPHVAYELLKIFED-FGIIFPLAEYF---DPLTIGY-------WLPKSPR   94 (128)
T ss_pred             HHHHHHHHHHHHHHHCC---eEEEEEeCCCCHHHHHHHHHhccc-cccchhhHhhh---hhhhhcC-------CCcHHHH
Confidence            68899999999999999   999999998667788888876540 0000  01100   1111111       0135666


Q ss_pred             HHHHHhhcC--CCCCceEEEEcCCcccHHHHH
Q 010855          400 FNDILKDHS--NDEQNLTVYIGGSPGDLLCLL  429 (499)
Q Consensus       400 l~~~~~~~~--~~~~~~vIyiGDs~tDl~~l~  429 (499)
                      +...+...+  . .+.+++||||+..|+....
T Consensus        95 ~~~a~~~lg~~~-~p~~~l~igDs~~n~~~~~  125 (128)
T TIGR01681        95 LVEIALKLNGVL-KPKSILFVDDRPDNNEEVD  125 (128)
T ss_pred             HHHHHHHhcCCC-CcceEEEECCCHhHHHHHH
Confidence            776666665  4 3578999999999987664

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.73  E-value=0.0016  Score=63.34  Aligned_cols=46  Identities=20%  Similarity=0.208  Sum_probs=37.9

Q ss_pred             hhhhHHHHHHHHhhcCCC-CCceEEEEcCCcccHHHHHhcCccEEEc
Q 010855          393 PLEKLQAFNDILKDHSND-EQNLTVYIGGSPGDLLCLLEADIGIVIG  438 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~-~~~~vIyiGDs~tDl~~l~~Adigiv~~  438 (499)
                      +.+|...++.+++..+.. ....++++|||.||++|++.||+||+++
T Consensus       179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~  225 (225)
T TIGR02461       179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG  225 (225)
T ss_pred             CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence            668999999888765431 2347999999999999999999999975

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.71  E-value=0.0019  Score=64.47  Aligned_cols=49  Identities=27%  Similarity=0.276  Sum_probs=41.2

Q ss_pred             hhHHHHHHHHhhcCCCCC-ceEEEEcCCcccHHHHHhcCccEEEcCC-chHH
Q 010855          395 EKLQAFNDILKDHSNDEQ-NLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLR  444 (499)
Q Consensus       395 ~K~~~l~~~~~~~~~~~~-~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~  444 (499)
                      .|...++.+.+..+.+ . .++++||||.||++|+..|++|++|++. +.+.
T Consensus       190 ~Kg~al~~l~~~~~i~-~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k  240 (273)
T PRK00192        190 DKGKAVRWLKELYRRQ-DGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP  240 (273)
T ss_pred             CHHHHHHHHHHHHhcc-CCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence            6888898888776653 5 7899999999999999999999999974 3443

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.68  E-value=0.042  Score=53.72  Aligned_cols=201  Identities=19%  Similarity=0.219  Sum_probs=109.0

Q ss_pred             EEEEeCCccccc--ccchHHHHHHHHHhcCCCCCCCccchhhcccccccc-ccHHHHHHHHHHHHHHHHhhhcCcchhhc
Q 010855          200 TLFCDFDWTCTA--FDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLR-NTWDVLSTKYTEEYEQCIESIMSSEAVAE  276 (499)
Q Consensus       200 ~ii~DFD~TIT~--~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~y~~~~~~~~~~~~p~~~~~~  276 (499)
                      +|+||++|||..  ........+++-..                   .++ .. +.+...+..+|.+.... .|-...  
T Consensus         9 avtfD~~~tLl~~~~~~~~~y~~i~~~~-------------------gl~~~~-~~~~~~~~~~~~~~~~~-~p~~~~--   65 (237)
T KOG3085|consen    9 AVTFDAGGTLLATLPPVMEVYCEIAEAY-------------------GLEYDD-SLIETIFRKDFKKMSEK-GPFFGL--   65 (237)
T ss_pred             EEEEeCCCceeecCCccHHHHHHHHHHh-------------------CCCCCH-HHHhHhhhHHHHhhccc-CCcccc--
Confidence            999999999974  44555555544322                   133 22 45555555555432211 122111  


Q ss_pred             CCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHH--Hh---------hcCCCChhHHHHHHHHHHcCCCcccEE
Q 010855          277 FEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKW--AS---------QHLIFQDGCRRFFQNTIKSTNFKTDVH  345 (499)
Q Consensus       277 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~--~~---------~~i~lr~G~~efl~~l~~~g~~~~~~~  345 (499)
                        +.+.+    ..++||...+.....   .++...++...  ++         +...+-+|+.++++++|+.|   ..+.
T Consensus        66 --~~g~l----~~~~ww~~lv~~~f~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g---~~l~  133 (237)
T KOG3085|consen   66 --YSGEL----TLSQWWPKLVESTFG---KAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKG---TILG  133 (237)
T ss_pred             --cCCcc----cHHHHHHHHHHHHhc---cccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCC---eEEE
Confidence              11111    245677655554432   22333222221  11         23456778889999999999   7888


Q ss_pred             EEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhh--HHHHHHHHhhcCCCCCceEEEEcCC-c
Q 010855          346 VLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEK--LQAFNDILKDHSNDEQNLTVYIGGS-P  422 (499)
Q Consensus       346 IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~~~l~~~~~~~~~~~~~~vIyiGDs-~  422 (499)
                      |+|-.  ++-.+.++...++..        .||--+.      .+.-|..|  .+++...+...+. .+..+++|||+ .
T Consensus       134 iisN~--d~r~~~~l~~~~l~~--------~fD~vv~------S~e~g~~KPDp~If~~al~~l~v-~Pee~vhIgD~l~  196 (237)
T KOG3085|consen  134 IISNF--DDRLRLLLLPLGLSA--------YFDFVVE------SCEVGLEKPDPRIFQLALERLGV-KPEECVHIGDLLE  196 (237)
T ss_pred             EecCC--cHHHHHHhhccCHHH--------hhhhhhh------hhhhccCCCChHHHHHHHHHhCC-ChHHeEEecCccc
Confidence            88843  556677766665420        0110011      11122233  2344444544444 36789999997 5


Q ss_pred             ccHHHHHhcCc-cEEEcCC-chHHhhhhhhCC
Q 010855          423 GDLLCLLEADI-GIVIGSS-SSLRRLGDHFGV  452 (499)
Q Consensus       423 tDl~~l~~Adi-giv~~~~-~~L~~~~~~~gi  452 (499)
                      ||+..++.+|. ++++.+. ..+.+.-...|+
T Consensus       197 nD~~gA~~~G~~ailv~~~~~~~~~~~~~~~~  228 (237)
T KOG3085|consen  197 NDYEGARNLGWHAILVDNSITALKELEYKLGI  228 (237)
T ss_pred             cccHhHHHcCCEEEEEccccchhhhhhhcccc
Confidence            88999999996 8888764 344443344443

>PLN02382 probable sucrose-phosphatase

Probab=96.63  E-value=0.0024  Score=67.86  Aligned_cols=55  Identities=22%  Similarity=0.187  Sum_probs=44.9

Q ss_pred             ChhhhHHHHHHHHhhc---CCCCCceEEEEcCCcccHHHHHhcC-ccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDH---SNDEQNLTVYIGGSPGDLLCLLEAD-IGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~---~~~~~~~vIyiGDs~tDl~~l~~Ad-igiv~~~~-~~L~~~~  447 (499)
                      .+.+|...++.+++..   +.+ ..+++++|||.||++|+..++ +||+|++. +.+++.+
T Consensus       172 ~g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a  231 (413)
T PLN02382        172 QGAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWY  231 (413)
T ss_pred             CCCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHH
Confidence            3557999999988876   443 468999999999999999999 69999874 5677654

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=96.51  E-value=0.0043  Score=61.23  Aligned_cols=77  Identities=22%  Similarity=0.258  Sum_probs=49.5

Q ss_pred             HHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          355 LIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       355 ~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      -|+..|+..|+..--+++|      +... .+.+   .+.+|...++-++...+.+ ..+++++|||-||++||..+..|
T Consensus       135 ~i~~~l~~~~l~~~~i~s~------~~~l-dilP---~~a~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL~~~~~~  203 (247)
T PF05116_consen  135 EIRARLRQRGLRVNVIYSN------GRDL-DILP---KGASKGAALRYLMERWGIP-PEQVLVAGDSGNDLEMLEGGDHG  203 (247)
T ss_dssp             HHHHHHHCCTCEEEEEECT------CCEE-EEEE---TT-SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHHCCSSEE
T ss_pred             HHHHHHHHcCCCeeEEEcc------ceeE-EEcc---CCCCHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHHcCcCCE
Confidence            4666677766532223333      2110 1222   3446999999888877653 46899999999999999888889


Q ss_pred             EEEcCC-ch
Q 010855          435 IVIGSS-SS  442 (499)
Q Consensus       435 iv~~~~-~~  442 (499)
                      |++++. +.
T Consensus       204 vvV~Na~~e  212 (247)
T PF05116_consen  204 VVVGNAQPE  212 (247)
T ss_dssp             EE-TTS-HH
T ss_pred             EEEcCCCHH
Confidence            999874 44

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=96.50  E-value=0.0059  Score=68.19  Aligned_cols=110  Identities=16%  Similarity=0.129  Sum_probs=71.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCC--CceEEEeec-eEeeC------Ceeecccc-cc
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDL--NAFRVHSNE-LVYEE------SISTGEIV-NK  389 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl--~~~~I~aN~-l~~~~------g~~tG~~~-~~  389 (499)
                      +-+.|||.++-++.|++.|   +.+-.|.+. .-.--+++..+.|+  ++....|=+ -+|.+      ....+++. -.
T Consensus       645 kDPvRPgV~~AV~~Cq~AG---ItVRMVTGD-NI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlA  720 (1034)
T KOG0204|consen  645 KDPVRPGVPEAVQLCQRAG---ITVRMVTGD-NINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLA  720 (1034)
T ss_pred             cCCCCCCcHHHHHHHHHcC---cEEEEEeCC-cHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeee
Confidence            3489999999999999999   999999974 22334555566664  111111110 01110      00111111 01


Q ss_pred             CCChhhhHHHHHHHHhhcCCCCCceEE-EEcCCcccHHHHHhcCccEEEcC
Q 010855          390 LESPLEKLQAFNDILKDHSNDEQNLTV-YIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       390 ~~~g~~K~~~l~~~~~~~~~~~~~~vI-yiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      .-++.||...++.++..      .++| .-|||.||-|+|++||+|.+|+=
T Consensus       721 RSSP~DK~lLVk~L~~~------g~VVAVTGDGTNDaPALkeADVGlAMGI  765 (1034)
T KOG0204|consen  721 RSSPNDKHLLVKGLIKQ------GEVVAVTGDGTNDAPALKEADVGLAMGI  765 (1034)
T ss_pred             cCCCchHHHHHHHHHhc------CcEEEEecCCCCCchhhhhcccchhccc
Confidence            24678999999888842      3555 68999999999999999999984

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=96.34  E-value=0.0097  Score=60.07  Aligned_cols=101  Identities=5%  Similarity=-0.119  Sum_probs=63.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc---eEEEeeceEeeCCeeecccccc----CCCh
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA---FRVHSNELVYEESISTGEIVNK----LESP  393 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~---~~I~aN~l~~~~g~~tG~~~~~----~~~g  393 (499)
                      ..+.||+.++++.++++|   +++.|+|+. +....+..++.+++..   ..+++-.       .+..+...    -...
T Consensus       186 ~~~~~~~~~~l~~l~~~g---~~i~i~T~r-~~~~~~~~l~~l~~~~~~f~~i~~~~-------~~~~~~~~~~~~kp~p  254 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAG---YEIIVVSGR-DGVCEEDTVEWLRQTDIWFDDLIGRP-------PDMHFQREQGDKRPDD  254 (300)
T ss_pred             CCCChhHHHHHHHHHhCC---CEEEEEeCC-ChhhHHHHHHHHHHcCCchhhhhCCc-------chhhhcccCCCCCCcH
Confidence            467899999999999999   999999988 4667777777654321   1122211       00001100    1112


Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                      .-+...++++.    ...+..++||||+.+|+.+.+.+++.++
T Consensus       255 ~~~~~~l~~~~----~~~~~~~~~vgD~~~d~~~a~~~Gi~~i  293 (300)
T PHA02530        255 VVKEEIFWEKI----APKYDVLLAVDDRDQVVDMWRRIGLECW  293 (300)
T ss_pred             HHHHHHHHHHh----ccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence            22333444332    2124679999999999999999998544

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=96.24  E-value=0.0068  Score=59.65  Aligned_cols=56  Identities=20%  Similarity=0.207  Sum_probs=44.6

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHh-cCccEEEcCC-chHHhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLE-ADIGIVIGSS-SSLRRLGD  448 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~-Adigiv~~~~-~~L~~~~~  448 (499)
                      .+.+|...++.+++..+.+ ..+++++|||.||++|++. ++.+|+|++. +.+++.+.
T Consensus       164 ~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~  221 (249)
T TIGR01485       164 QGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYD  221 (249)
T ss_pred             CCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHH
Confidence            3457999999998877663 5789999999999999998 5679999874 56665543

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=96.21  E-value=0.083  Score=49.82  Aligned_cols=117  Identities=15%  Similarity=0.150  Sum_probs=58.7

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ..++.-||+.+.++.+.+.|   ...++|++.-..                                  ....+...|.+
T Consensus        70 ~~l~p~~gA~e~l~~L~~~g---~~~~~Itar~~~----------------------------------~~~~~~~~k~~  112 (191)
T PF06941_consen   70 SNLPPIPGAVEALKKLRDKG---HEIVIITARPPE----------------------------------FPDHSAEEKRE  112 (191)
T ss_dssp             TT--B-TTHHHHHHHHHTST---TEEEEEEE-SSS----------------------------------SGCCCHHHHHH
T ss_pred             cCCCccHHHHHHHHHHHHcC---CcEEEEEecCcc----------------------------------ccchHHHHHHH
Confidence            35778899999999999988   666666653100                                  00002234555


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhhhhCCccccccchHHHHHHHhhcCCCccccc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLFSSLVERQKELVDGSSYKWKR  478 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~~~~  478 (499)
                      -|++.....   ...++++.||-     .+..+|  |++-+++.-.+-+...|++.+=|. ..              |-+
T Consensus       113 Wl~~hf~~i---~~~~~~~~~~K-----~~v~~D--vlIDD~~~n~~~~~~~g~~~iLfd-~p--------------~Nr  167 (191)
T PF06941_consen  113 WLERHFPFI---PYDNLIFTGDK-----TLVGGD--VLIDDRPHNLEQFANAGIPVILFD-QP--------------YNR  167 (191)
T ss_dssp             HHHHHHTHH---HHCCEEEESSG-----GGC--S--EEEESSSHHHSS-SSESSEEEEE---G--------------GGT
T ss_pred             HHHHHcCCC---chheEEEecCC-----CeEecc--EEecCChHHHHhccCCCceEEEEc-CC--------------CCC
Confidence            555543211   01234454442     123455  566666555555666676655442 00              111


Q ss_pred             cCCEEEEEcCHHHHHHhhc
Q 010855          479 LPGTLYTVSSWAEIHAFIL  497 (499)
Q Consensus       479 ~~g~ly~~~~W~~i~~~~~  497 (499)
                      .-...++|.+|.||.+++.
T Consensus       168 ~~~~~~Rv~~W~ei~~~i~  186 (191)
T PF06941_consen  168 DESNFPRVNNWEEIEDLIL  186 (191)
T ss_dssp             T--TSEEE-STTSHHHHHH
T ss_pred             CCCCCccCCCHHHHHHHHH
Confidence            0015899999999987763

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.18  E-value=0.0041  Score=58.98  Aligned_cols=45  Identities=18%  Similarity=0.273  Sum_probs=38.5

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      .+.+|...++.+++..+.+ ...+++||||.||++|+..++++|+|
T Consensus       160 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~vam  204 (204)
T TIGR01484       160 AGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVAV  204 (204)
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceEC
Confidence            4568999999999876643 46799999999999999999998875

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01686 FkbH FkbH-like domain

Probab=96.07  E-value=0.05  Score=55.77  Aligned_cols=111  Identities=12%  Similarity=-0.015  Sum_probs=76.2

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHc----CCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFAS----GDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~----~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      +.+|+.++++.++++|   +.+.|+|.+- ...+..+|++    .++..  ..+.+|                   ...|
T Consensus        32 ~~~~~~e~L~~L~~~G---i~lai~S~n~-~~~a~~~l~~~~~~~~~~~~f~~~~~~-------------------~~pk   88 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQG---FLLALASKND-EDDAKKVFERRKDFILQAEDFDARSIN-------------------WGPK   88 (320)
T ss_pred             cHHHHHHHHHHHHhCC---CEEEEEcCCC-HHHHHHHHHhCccccCcHHHeeEEEEe-------------------cCch
Confidence            3789999999999999   9999999995 6788889987    33321  112121                   1248


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhhhhCCcccccc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~~~gi~~~p~~  458 (499)
                      ...+++++...+.+ ...++||||+..|+.....+...|-+... ..+.+.+... +.|.|..
T Consensus        89 ~~~i~~~~~~l~i~-~~~~vfidD~~~d~~~~~~~lp~~~~~~~~~~~~~~l~~~-~~~~~~~  149 (320)
T TIGR01686        89 SESLRKIAKKLNLG-TDSFLFIDDNPAERANVKITLPVKTLLCDPAELAAILLFL-NELLPLA  149 (320)
T ss_pred             HHHHHHHHHHhCCC-cCcEEEECCCHHHHHHHHHHCCCCccCCChHHHHHHhccc-ccccCcc
Confidence            88888888877663 57899999999999999987644433332 3444444332 2344443

The C-terminal portion of this domain is unique to this family (by BLAST).

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=95.96  E-value=0.13  Score=50.91  Aligned_cols=110  Identities=9%  Similarity=0.102  Sum_probs=71.5

Q ss_pred             HHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHH---cCCCCceEE-EeeceE-----eeCC----
Q 010855          314 IKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFA---SGDLNAFRV-HSNELV-----YEES----  380 (499)
Q Consensus       314 l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~---~~gl~~~~I-~aN~l~-----~~~g----  380 (499)
                      +....+...+.+.+.++++.++++|   +++..+|..+ ..+....++   +.|++...- ..++..     +.+.    
T Consensus        73 i~~~~~~~lie~~~~~~i~~lq~~~---~~v~alT~~~-~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~  148 (252)
T PF11019_consen   73 IFELRKMELIESDVPNIINSLQNKG---IPVIALTARG-PNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRA  148 (252)
T ss_pred             HHhhcceEEcchhHHHHHHHHHHCC---CcEEEEcCCC-hhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCC
Confidence            3444556678889999999999999   9999999986 666666654   345432111 111110     0000    


Q ss_pred             --eeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhc
Q 010855          381 --ISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA  431 (499)
Q Consensus       381 --~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A  431 (499)
                        ...|-+   .++|.+|...|..++...+. .+.++|||-|+.-.+..+..+
T Consensus       149 ~~~~~GIl---ft~~~~KG~~L~~fL~~~~~-~pk~IIfIDD~~~nl~sv~~a  197 (252)
T PF11019_consen  149 PSFYDGIL---FTGGQDKGEVLKYFLDKINQ-SPKKIIFIDDNKENLKSVEKA  197 (252)
T ss_pred             ceeecCeE---EeCCCccHHHHHHHHHHcCC-CCCeEEEEeCCHHHHHHHHHH
Confidence              011111   24567899999999987665 367899999999888765554

The function is not known.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=95.95  E-value=0.008  Score=66.75  Aligned_cols=48  Identities=17%  Similarity=0.054  Sum_probs=39.7

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEE--cCCcccHHHHHhcCccEEEcCC
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYI--GGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyi--GDs~tDl~~l~~Adigiv~~~~  440 (499)
                      .+.+|...++.+++..+.. ..+++.+  |||.||++||..||+||+|++.
T Consensus       610 ~gvdKG~AL~~L~e~~gI~-~~eViafalGDs~NDisMLe~Ag~gVAM~~~  659 (694)
T PRK14502        610 GGNDKGKAIKILNELFRLN-FGNIHTFGLGDSENDYSMLETVDSPILVQRP  659 (694)
T ss_pred             CCCCHHHHHHHHHHHhCCC-ccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence            3678999999998877653 2456666  9999999999999999999874

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=95.94  E-value=0.008  Score=65.68  Aligned_cols=112  Identities=16%  Similarity=0.152  Sum_probs=66.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      +.=|.++..-+..++.++   ....|+++. |-.+.....+..   .+++.|-        + +.+.+--|++..|+++.
T Consensus       710 v~sr~dah~eL~~lR~k~---~~aLvi~G~-Sl~~cl~yye~E---f~el~~~--------~-~aVv~CRctPtQKA~v~  773 (1051)
T KOG0210|consen  710 VTSRGDAHNELNNLRRKT---DCALVIDGE-SLEFCLKYYEDE---FIELVCE--------L-PAVVCCRCTPTQKAQVV  773 (1051)
T ss_pred             cCCchHHHHHHHHhhcCC---CcEEEEcCc-hHHHHHHHHHHH---HHHHHHh--------c-CcEEEEecChhHHHHHH
Confidence            455667777777777766   556666653 222221111110   1111110        0 01111247888999988


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhhhhCC
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGDHFGV  452 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~~~gi  452 (499)
                      +-+.+..    +..+.+||||-||..|+..||+||-+-++ .+=+.+|..+.|
T Consensus       774 ~llq~~t----~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI  822 (1051)
T KOG0210|consen  774 RLLQKKT----GKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSI  822 (1051)
T ss_pred             HHHHHhh----CceEEEEcCCCccchheeecccceeeecccccccchhccccH
Confidence            8777653    35788999999999999999998877654 333444455544

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=95.85  E-value=0.056  Score=52.79  Aligned_cols=91  Identities=11%  Similarity=0.082  Sum_probs=52.7

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCC--hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      +.-||+.+|++.++++|   +.+++||+=-.  ...-..-|.+.|+...    +.+.+..   .+.. .+.....-|..+
T Consensus       115 ~aip~a~~l~~~~~~~G---~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~~l~lr~---~~~~-~~~~~~~yK~~~  183 (229)
T PF03767_consen  115 PAIPGALELYNYARSRG---VKVFFITGRPESQREATEKNLKKAGFPGW----DHLILRP---DKDP-SKKSAVEYKSER  183 (229)
T ss_dssp             EEETTHHHHHHHHHHTT---EEEEEEEEEETTCHHHHHHHHHHHTTSTB----SCGEEEE---ESST-SS------SHHH
T ss_pred             cccHHHHHHHHHHHHCC---CeEEEEecCCchhHHHHHHHHHHcCCCcc----chhcccc---cccc-ccccccccchHH
Confidence            66788999999999999   99999998321  2233334555565321    1111100   0000 011123347777


Q ss_pred             HHHHHhhcCCCCCceEE-EEcCCcccHHHH
Q 010855          400 FNDILKDHSNDEQNLTV-YIGGSPGDLLCL  428 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vI-yiGDs~tDl~~l  428 (499)
                      .+.+.+.     +.+++ +|||..+|+.-.
T Consensus       184 r~~i~~~-----Gy~Ii~~iGD~~~D~~~~  208 (229)
T PF03767_consen  184 RKEIEKK-----GYRIIANIGDQLSDFSGA  208 (229)
T ss_dssp             HHHHHHT-----TEEEEEEEESSGGGCHCT
T ss_pred             HHHHHHc-----CCcEEEEeCCCHHHhhcc
Confidence            7777653     24555 899999999873

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=95.84  E-value=0.0087  Score=59.75  Aligned_cols=49  Identities=14%  Similarity=0.241  Sum_probs=41.3

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhc----CccEEEcCCc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA----DIGIVIGSSS  441 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A----digiv~~~~~  441 (499)
                      .+.+|...++++++..+.. ...++|+||+.||..|+..+    ++||.|+.+.
T Consensus       171 ~g~~Kg~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~  223 (266)
T PRK10187        171 RGTNKGEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA  223 (266)
T ss_pred             CCCCHHHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC
Confidence            3568999999999877653 46799999999999999999    8899998753

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=95.72  E-value=0.092  Score=51.43  Aligned_cols=89  Identities=15%  Similarity=0.107  Sum_probs=57.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHH--HHHHcCCCCc---eEEEeeceEeeCCeeeccccccCCChh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIR--SAFASGDLNA---FRVHSNELVYEESISTGEIVNKLESPL  394 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~--~~L~~~gl~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~  394 (499)
                      ...+-||+.+++++++++|   .++.|+|.+ +.....  ..|++.|+..   ..|+++.                   .
T Consensus        22 ~~~~~pga~e~L~~L~~~G---~~~~ivTN~-~~~~~~~~~~L~~~gl~~~~~~~Ii~s~-------------------~   78 (242)
T TIGR01459        22 GNHTYPGAVQNLNKIIAQG---KPVYFVSNS-PRNIFSLHKTLKSLGINADLPEMIISSG-------------------E   78 (242)
T ss_pred             CCccCccHHHHHHHHHHCC---CEEEEEeCC-CCChHHHHHHHHHCCCCccccceEEccH-------------------H
Confidence            3567899999999999999   999999987 355444  6778777642   1222221                   1


Q ss_pred             hhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcC
Q 010855          395 EKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD  432 (499)
Q Consensus       395 ~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Ad  432 (499)
                      .-...+.+..+..+. .+..++++||+..|+..+..++
T Consensus        79 ~~~~~l~~~~~~~~~-~~~~~~~vGd~~~d~~~~~~~~  115 (242)
T TIGR01459        79 IAVQMILESKKRFDI-RNGIIYLLGHLENDIINLMQCY  115 (242)
T ss_pred             HHHHHHHhhhhhccC-CCceEEEeCCcccchhhhcCCC
Confidence            111344444333222 1356899999999988775433

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=95.72  E-value=0.22  Score=48.32  Aligned_cols=105  Identities=10%  Similarity=0.120  Sum_probs=62.4

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCC-C-Cce-EEEe-eceEeeCCeeeccccccCCChh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGD-L-NAF-RVHS-NELVYEESISTGEIVNKLESPL  394 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~g-l-~~~-~I~a-N~l~~~~g~~tG~~~~~~~~g~  394 (499)
                      ....+.||+..+++.|..+|   +|+.++|..- ....+..+..++ + ..+ ++++ ...+    +..|..        
T Consensus        89 ~~~~~~PGa~kLv~~L~~~g---ip~alat~s~-~~~~~~k~~~~~~~~~~f~~~v~~d~~~----v~~gKP--------  152 (222)
T KOG2914|consen   89 MNSILMPGAEKLVNHLKNNG---IPVALATSST-SASFELKISRHEDIFKNFSHVVLGDDPE----VKNGKP--------  152 (222)
T ss_pred             cccccCCcHHHHHHHHHhCC---CCeeEEecCC-cccHHHHHHHhhHHHHhcCCCeecCCcc----ccCCCC--------
Confidence            36889999999999999999   9999999873 333444444443 1 101 1111 1111    111211        


Q ss_pred             hhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          395 EKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       395 ~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                       ....+-.-....+....++++.+.|+.+=+.+.+.|+.-+++-++
T Consensus       153 -~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  153 -DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             -CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence             111111111122222237899999999999999999976665554

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=95.56  E-value=0.094  Score=49.21  Aligned_cols=105  Identities=16%  Similarity=0.121  Sum_probs=68.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEec--cC-Ch-----------HHHHHHHHcCCCCceEEEeeceEeeCCeeeccc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSY--CW-CG-----------DLIRSAFASGDLNAFRVHSNELVYEESISTGEI  386 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~--g~-s~-----------~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~  386 (499)
                      ..+.||..+.+..+++.|   ..++|||.  |. ..           ..+...|+..|.....           ++.-+.
T Consensus        30 ~~~~~g~i~al~~l~~~g---y~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~-----------i~~Cph   95 (181)
T COG0241          30 FQFIPGVIPALLKLQRAG---YKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDG-----------ILYCPH   95 (181)
T ss_pred             hccCccHHHHHHHHHhCC---CeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccce-----------EEECCC
Confidence            578899999999999999   99999997  10 01           1234444444432122           211111


Q ss_pred             cc--cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          387 VN--KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       387 ~~--~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      .+  .+.|..-|.-.+.+++++.+.+ ...+++|||..+|+.++..+++ |+.+...
T Consensus        96 ~p~~~c~cRKP~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~  151 (181)
T COG0241          96 HPEDNCDCRKPKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTG  151 (181)
T ss_pred             CCCCCCcccCCChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence            11  1233334566788888877664 4789999999999999999997 5665543

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=95.31  E-value=0.1  Score=48.31  Aligned_cols=88  Identities=20%  Similarity=0.336  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHcCCCcccEEEEeccCCh---HHHHHHHHcCCCCceEEEee--ceEeeCCeeeccccccCCChhhhHHHHH
Q 010855          327 CRRFFQNTIKSTNFKTDVHVLSYCWCG---DLIRSAFASGDLNAFRVHSN--ELVYEESISTGEIVNKLESPLEKLQAFN  401 (499)
Q Consensus       327 ~~efl~~l~~~g~~~~~~~IVS~g~s~---~~I~~~L~~~gl~~~~I~aN--~l~~~~g~~tG~~~~~~~~g~~K~~~l~  401 (499)
                      +..+|+.++++|   ..++.|.+- +.   +-+...|++    +++| .|  .+.|     +|.  .+-..-.+|...++
T Consensus       119 A~qLI~MHq~RG---D~i~FvTGR-t~gk~d~vsk~Lak----~F~i-~~m~pv~f-----~Gd--k~k~~qy~Kt~~i~  182 (237)
T COG3700         119 ARQLIDMHQRRG---DAIYFVTGR-TPGKTDTVSKTLAK----NFHI-TNMNPVIF-----AGD--KPKPGQYTKTQWIQ  182 (237)
T ss_pred             HHHHHHHHHhcC---CeEEEEecC-CCCcccccchhHHh----hccc-CCCcceee-----ccC--CCCcccccccHHHH
Confidence            456899999999   788888763 22   122223332    1222 11  2222     232  11123346776554


Q ss_pred             HHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          402 DILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       402 ~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      +         ....|.+|||.+|+.++++|++ ||-+-+
T Consensus       183 ~---------~~~~IhYGDSD~Di~AAkeaG~RgIRilR  212 (237)
T COG3700         183 D---------KNIRIHYGDSDNDITAAKEAGARGIRILR  212 (237)
T ss_pred             h---------cCceEEecCCchhhhHHHhcCccceeEEe
Confidence            2         1346899999999999999996 776543

>TIGR01675 plant-AP plant acid phosphatase

Probab=95.28  E-value=0.35  Score=47.21  Aligned_cols=88  Identities=15%  Similarity=0.205  Sum_probs=56.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHH---HHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCCh-hh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDL---IRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESP-LE  395 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~---I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g-~~  395 (499)
                      ..+.-||..+|++.++++|   +.++++|+=. ...   ...-|.+.|++..    .+|...+.   +   ...... .-
T Consensus       118 ~apaip~al~l~~~l~~~G---~~Vf~lTGR~-e~~r~~T~~nL~~~G~~~~----~~LiLR~~---~---d~~~~~~~y  183 (229)
T TIGR01675       118 AAPALPEGLKLYQKIIELG---IKIFLLSGRW-EELRNATLDNLINAGFTGW----KHLILRGL---E---DSNKTVVTY  183 (229)
T ss_pred             CCCCCHHHHHHHHHHHHCC---CEEEEEcCCC-hHHHHHHHHHHHHcCCCCc----CeeeecCC---C---CCCchHhHH
Confidence            4578899999999999999   9999999852 323   5566667776531    22222110   0   001111 22


Q ss_pred             hHHHHHHHHhhcCCCCCceEE-EEcCCcccHH
Q 010855          396 KLQAFNDILKDHSNDEQNLTV-YIGGSPGDLL  426 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vI-yiGDs~tDl~  426 (499)
                      |....+++.+.     +.+++ .|||-.+|+.
T Consensus       184 Ks~~R~~l~~~-----GYrIv~~iGDq~sDl~  210 (229)
T TIGR01675       184 KSEVRKSLMEE-----GYRIWGNIGDQWSDLL  210 (229)
T ss_pred             HHHHHHHHHhC-----CceEEEEECCChHHhc
Confidence            77777676643     45666 7999999994

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=94.99  E-value=0.12  Score=56.49  Aligned_cols=122  Identities=7%  Similarity=0.005  Sum_probs=76.3

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccCC-----------hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCC
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCWC-----------GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLE  391 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~s-----------~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~  391 (499)
                      +.||+.+.|+.|+++|   +.++|+|.--.           ...+..+++.+|++..-++|-.    ++    .      
T Consensus       198 l~pgV~e~L~~L~~~G---y~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~----~~----~------  260 (526)
T TIGR01663       198 IFPEIPEKLKELEADG---FKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIG----AG----F------  260 (526)
T ss_pred             cccCHHHHHHHHHHCC---CEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCceEEEEeCC----CC----C------
Confidence            5789999999999999   99999997311           0247788888887533333321    00    0      


Q ss_pred             ChhhhHHHHHHHHhhcC----CCCCceEEEEcCCcccHHHHHhcCccEEEcC-CchHHhhhhhhCCccccccchHHHH
Q 010855          392 SPLEKLQAFNDILKDHS----NDEQNLTVYIGGSPGDLLCLLEADIGIVIGS-SSSLRRLGDHFGVSFVPLFSSLVER  464 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~----~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~-~~~L~~~~~~~gi~~~p~~~~~~~~  464 (499)
                      +..-+...+..+....+    . ...+++||||..+|+.+...|+.  --.+ ...=+.+|..-||+|..-++-+++.
T Consensus       261 ~RKP~pGm~~~a~~~~~~~~~I-d~~~S~~VGDaagr~~~g~~ag~--~~~D~s~~D~~FA~n~gi~F~tPee~Fl~~  335 (526)
T TIGR01663       261 YRKPLTGMWDHLKEEANDGTEI-QEDDCFFVGDAAGRPANGKAAGK--KKKDFSCADRLFAANLGIPFATPEEFFLGK  335 (526)
T ss_pred             CCCCCHHHHHHHHHhcCcccCC-CHHHeEEeCCcccchHHHHhcCC--CcCCCChhhHHHHHHcCCcccChHHHhCCC
Confidence            11112234444444432    2 24689999999999988777751  0011 1123567889999988766544443

Note that the EC number for the kinase function is: 2.7.1.78

>PTZ00174 phosphomannomutase; Provisional

Probab=94.83  E-value=0.033  Score=54.87  Aligned_cols=53  Identities=11%  Similarity=0.188  Sum_probs=40.0

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcC----CcccHHHHHhcCc-cEEEcCC-chHHhhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGG----SPGDLLCLLEADI-GIVIGSS-SSLRRLGDH  449 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGD----s~tDl~~l~~Adi-giv~~~~-~~L~~~~~~  449 (499)
                      .+.+|...|+.+.+.     ..+++++||    |.||++|++.|.. |+.+++. +.+..+|+-
T Consensus       185 ~gvsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~  243 (247)
T PTZ00174        185 KGWDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKEL  243 (247)
T ss_pred             CCCcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHH
Confidence            456799999999875     368999999    8999999997643 6777653 455555543

>PLN02423 phosphomannomutase

Probab=94.57  E-value=0.045  Score=53.96  Aligned_cols=52  Identities=13%  Similarity=0.113  Sum_probs=43.1

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcC----CcccHHHHHhcCc-cEEEcCCchHHhhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGG----SPGDLLCLLEADI-GIVIGSSSSLRRLGDH  449 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGD----s~tDl~~l~~Adi-giv~~~~~~L~~~~~~  449 (499)
                      .|.+|...|+.+. .     .++++++||    +.||++||+..++ |+.+.+.+.+.+.|.+
T Consensus       186 ~gvnKg~al~~L~-~-----~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~~~~  242 (245)
T PLN02423        186 QGWDKTYCLQFLE-D-----FDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQCTA  242 (245)
T ss_pred             CCCCHHHHHHHhc-C-----cCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHHHHH
Confidence            4668999999998 1     478999999    8999999998775 8888877677777765

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=94.47  E-value=0.018  Score=53.04  Aligned_cols=94  Identities=15%  Similarity=0.144  Sum_probs=57.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      .+..|||+.+|++.+.++    .+++|.|+| +..+++.+++..+... .++...+--++...+.          .+  +
T Consensus        40 ~v~~RPgl~eFL~~l~~~----yei~I~Ts~-~~~yA~~il~~ldp~~-~~f~~~l~r~~~~~~~----------~~--~  101 (162)
T TIGR02251        40 YVFKRPHVDEFLERVSKW----YELVIFTAS-LEEYADPVLDILDRGG-KVISRRLYRESCVFTN----------GK--Y  101 (162)
T ss_pred             EEEECCCHHHHHHHHHhc----CEEEEEcCC-cHHHHHHHHHHHCcCC-CEEeEEEEccccEEeC----------CC--E
Confidence            478999999999999874    689999999 5889999998765321 1222211111111110          01  1


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      ++.+.. .+. ...++|+|||+..|+.+...+++
T Consensus       102 ~K~L~~-l~~-~~~~vIiVDD~~~~~~~~~~NgI  133 (162)
T TIGR02251       102 VKDLSL-VGK-DLSKVIIIDNSPYSYSLQPDNAI  133 (162)
T ss_pred             EeEchh-cCC-ChhhEEEEeCChhhhccCccCEe
Confidence            111111 111 13689999999998876666653

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=93.14  E-value=0.079  Score=62.24  Aligned_cols=45  Identities=29%  Similarity=0.429  Sum_probs=37.2

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      ++..|+.+++-.+...    +..+.+||||.||..|+..||+||.|...
T Consensus       778 sPlQKA~Vv~lVk~~~----~~~TLAIGDGANDVsMIQ~AhVGVGIsG~  822 (1151)
T KOG0206|consen  778 SPLQKALVVKLVKKGL----KAVTLAIGDGANDVSMIQEAHVGVGISGQ  822 (1151)
T ss_pred             CHHHHHHHHHHHHhcC----CceEEEeeCCCccchheeeCCcCeeeccc
Confidence            4678998888775332    45788999999999999999999999875

>PLN02580 trehalose-phosphatase

Probab=92.85  E-value=0.27  Score=51.59  Aligned_cols=48  Identities=21%  Similarity=0.221  Sum_probs=37.4

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCce--EEEEcCCcccHHHHHh-----cCccEEEcC
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNL--TVYIGGSPGDLLCLLE-----ADIGIVIGS  439 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~--vIyiGDs~tDl~~l~~-----Adigiv~~~  439 (499)
                      .+.+|...++.+++..+......  .+||||+.||..|+..     +++||+|+.
T Consensus       298 ~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn  352 (384)
T PLN02580        298 IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS  352 (384)
T ss_pred             CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec
Confidence            35689999999998765532222  4899999999999996     477888875

>TIGR00685 T6PP trehalose-phosphatase

Probab=92.47  E-value=0.15  Score=50.15  Aligned_cols=39  Identities=15%  Similarity=0.116  Sum_probs=32.9

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA  431 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A  431 (499)
                      .+.+|...++.+++..+.. ...++|+||+.||..|+..+
T Consensus       164 ~~~~Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~  202 (244)
T TIGR00685       164 RFVNKGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVV  202 (244)
T ss_pred             CCCCHHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHH
Confidence            3568999999999876543 36799999999999999998

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=91.97  E-value=0.31  Score=54.94  Aligned_cols=28  Identities=36%  Similarity=0.515  Sum_probs=23.9

Q ss_pred             eEE-EEcCCcccHHHHHhcCccEEEc-CCc
Q 010855          414 LTV-YIGGSPGDLLCLLEADIGIVIG-SSS  441 (499)
Q Consensus       414 ~vI-yiGDs~tDl~~l~~Adigiv~~-~~~  441 (499)
                      .+| ..|||+||-|+|+.|||||+|+ +++
T Consensus       706 aiVaVTGDGVNDsPALKKADIGVAMGiaGS  735 (1019)
T KOG0203|consen  706 AIVAVTGDGVNDSPALKKADIGVAMGIAGS  735 (1019)
T ss_pred             cEEEEeCCCcCCChhhcccccceeeccccc
Confidence            345 7999999999999999999996 344

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=91.75  E-value=2.7  Score=42.02  Aligned_cols=91  Identities=11%  Similarity=0.088  Sum_probs=53.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC--hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ..+--||+.+|++.++++|   +.+++||+=-.  ......-|.+.|++.-    .+|...+.   +.- .+.....-|.
T Consensus       143 ~ApAlp~al~ly~~l~~~G---~kIf~VSgR~e~~r~aT~~NL~kaGy~~~----~~LiLR~~---~D~-~~~~av~yKs  211 (275)
T TIGR01680       143 EAPALPETLKNYNKLVSLG---FKIIFLSGRLKDKQAVTEANLKKAGYHTW----EKLILKDP---QDN-SAENAVEYKT  211 (275)
T ss_pred             cCCCChHHHHHHHHHHHCC---CEEEEEeCCchhHHHHHHHHHHHcCCCCc----ceeeecCC---CCC-ccchhHHHHH
Confidence            4566779999999999999   99999998521  2234444566676421    12222110   000 0011123465


Q ss_pred             HHHHHHHhhcCCCCCceEE-EEcCCcccHH
Q 010855          398 QAFNDILKDHSNDEQNLTV-YIGGSPGDLL  426 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vI-yiGDs~tDl~  426 (499)
                      ...+++.++     +.+++ .|||-.+|+.
T Consensus       212 ~~R~~li~e-----GYrIv~~iGDq~sDl~  236 (275)
T TIGR01680       212 AARAKLIQE-----GYNIVGIIGDQWNDLK  236 (275)
T ss_pred             HHHHHHHHc-----CceEEEEECCCHHhcc
Confidence            555555542     35666 8999999993

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=91.49  E-value=0.34  Score=38.29  Aligned_cols=42  Identities=24%  Similarity=0.275  Sum_probs=30.7

Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCc-cEEEcCC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adi-giv~~~~  440 (499)
                      ..+.......+.+ ..++++|||+ .+|+.+.+.+++ +|++..+
T Consensus         8 ~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG   51 (75)
T PF13242_consen    8 GMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTG   51 (75)
T ss_dssp             HHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSS
T ss_pred             HHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCC
Confidence            3444444444442 5789999999 999999999998 6777653

...

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=90.94  E-value=1.8  Score=39.94  Aligned_cols=93  Identities=16%  Similarity=0.104  Sum_probs=63.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      +-...|...+.+..+++.|   +.++|||.+ +..-+..++++.|++.+  +-.      +       .+.      ...
T Consensus        44 ~~~~tpe~~~W~~e~k~~g---i~v~vvSNn-~e~RV~~~~~~l~v~fi--~~A------~-------KP~------~~~   98 (175)
T COG2179          44 NPDATPELRAWLAELKEAG---IKVVVVSNN-KESRVARAAEKLGVPFI--YRA------K-------KPF------GRA   98 (175)
T ss_pred             CCCCCHHHHHHHHHHHhcC---CEEEEEeCC-CHHHHHhhhhhcCCcee--ecc------c-------Ccc------HHH
Confidence            3467778889999999999   999999987 67778888887764321  110      0       111      123


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEc
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIG  438 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~  438 (499)
                      +++-+...+.+ .++++.|||.. ||+.....+++ -|.+-
T Consensus        99 fr~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~~tIlV~  138 (175)
T COG2179          99 FRRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGMRTILVE  138 (175)
T ss_pred             HHHHHHHcCCC-hhHEEEEcchhhhhhhcccccCcEEEEEE
Confidence            44444444453 57899999995 99999999986 45443

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=90.61  E-value=1.3  Score=41.12  Aligned_cols=104  Identities=8%  Similarity=-0.005  Sum_probs=62.1

Q ss_pred             HHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccc-cCCC
Q 010855          316 WASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVN-KLES  392 (499)
Q Consensus       316 ~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~-~~~~  392 (499)
                      +.++.+.|.|+..+.|+.|+++|   +.+.|-|-.+.++..+.+|+..++..  .......         ..|.. .+..
T Consensus        39 ~~g~~v~lypdv~~iL~~L~~~g---v~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~---------~~F~~~eI~~  106 (169)
T PF12689_consen   39 SRGEEVSLYPDVPEILQELKERG---VKLAVASRTDEPDWARELLKLLEIDDADGDGVPLI---------EYFDYLEIYP  106 (169)
T ss_dssp             TT--EE---TTHHHHHHHHHHCT-----EEEEE--S-HHHHHHHHHHTT-C-------------------CCECEEEESS
T ss_pred             CCCCEEEeCcCHHHHHHHHHHCC---CEEEEEECCCChHHHHHHHHhcCCCccccccccch---------hhcchhheec
Confidence            44678999999999999999999   99999998777889999999877640  0010000         01111 1112


Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                       .+|.+.++++....+. .+..++++=|-..-+.....-|+
T Consensus       107 -gsK~~Hf~~i~~~tgI-~y~eMlFFDDe~~N~~~v~~lGV  145 (169)
T PF12689_consen  107 -GSKTTHFRRIHRKTGI-PYEEMLFFDDESRNIEVVSKLGV  145 (169)
T ss_dssp             -S-HHHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-
T ss_pred             -CchHHHHHHHHHhcCC-ChhHEEEecCchhcceeeEecCc
Confidence             2799999999987776 36789999999988888777554

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=89.94  E-value=0.31  Score=55.65  Aligned_cols=47  Identities=17%  Similarity=0.239  Sum_probs=37.8

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhc---CccEEEcCCc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA---DIGIVIGSSS  441 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A---digiv~~~~~  441 (499)
                      .+.+|...++.+++..   ....++++||+.||.+|+..+   +++|.++.++
T Consensus       654 ~~vnKG~al~~ll~~~---~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~  703 (726)
T PRK14501        654 AGVNKGRAVRRLLEAG---PYDFVLAIGDDTTDEDMFRALPETAITVKVGPGE  703 (726)
T ss_pred             CCCCHHHHHHHHHhcC---CCCEEEEECCCCChHHHHHhcccCceEEEECCCC
Confidence            3457999999998733   246799999999999999987   4688888754

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=88.93  E-value=23  Score=34.29  Aligned_cols=117  Identities=13%  Similarity=0.138  Sum_probs=68.6

Q ss_pred             CHHHHHHHhh------cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCe
Q 010855          310 NLEDIKWASQ------HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESI  381 (499)
Q Consensus       310 ~~~~l~~~~~------~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~  381 (499)
                      +.++..+++.      .+..++-...++-.++.++     ..|++.+. ..=...+|+..|+..  ..|+|-+  +.+-.
T Consensus        82 d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~-----k~~FTNa~-k~HA~r~Lk~LGieDcFegii~~e--~~np~  153 (244)
T KOG3109|consen   82 DADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR-----KWIFTNAY-KVHAIRILKKLGIEDCFEGIICFE--TLNPI  153 (244)
T ss_pred             CHHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc-----EEEecCCc-HHHHHHHHHHhChHHhccceeEee--ccCCC
Confidence            4566666653      3445555678888887653     67778775 444445677877632  3344421  11100


Q ss_pred             eeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          382 STGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       382 ~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      -+ .+.   |-+.  ...++......+.+.+.+++++-||.+-+...+..|. +++++..
T Consensus       154 ~~-~~v---cKP~--~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~  207 (244)
T KOG3109|consen  154 EK-TVV---CKPS--EEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGRE  207 (244)
T ss_pred             CC-cee---ecCC--HHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEee
Confidence            00 111   1111  2334444444455557899999999999999999997 5666553

>TIGR01684 viral_ppase viral phosphatase

Probab=88.00  E-value=1.1  Score=45.17  Aligned_cols=49  Identities=12%  Similarity=0.014  Sum_probs=40.9

Q ss_pred             CCCC-hhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEee
Q 010855          321 LIFQ-DGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSN  373 (499)
Q Consensus       321 i~lr-~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN  373 (499)
                      +++| ||..++++.++++|   +++.|+|.| +.+.+...|+..|+..  ..|+||
T Consensus       144 v~irdPgV~EaL~~LkekG---ikLaIaTS~-~Re~v~~~L~~lGLd~YFdvIIs~  195 (301)
T TIGR01684       144 VRIRDPRIYDSLTELKKRG---CILVLWSYG-DRDHVVESMRKVKLDRYFDIIISG  195 (301)
T ss_pred             cccCCHHHHHHHHHHHHCC---CEEEEEECC-CHHHHHHHHHHcCCCcccCEEEEC
Confidence            5678 99999999999999   999999988 4778889999988863  345555

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=87.14  E-value=0.61  Score=52.59  Aligned_cols=42  Identities=19%  Similarity=0.250  Sum_probs=32.1

Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      ..|..++..+.+     .+..+...|||.||.-+|++|++||++-++
T Consensus       793 ~QKE~ii~tlK~-----~Gy~TLMCGDGTNDVGALK~AhVGVALL~~  834 (1160)
T KOG0209|consen  793 KQKEFIITTLKK-----LGYVTLMCGDGTNDVGALKQAHVGVALLNN  834 (1160)
T ss_pred             hhHHHHHHHHHh-----cCeEEEEecCCCcchhhhhhcccceehhcC
Confidence            344444444443     257889999999999999999999998764

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=87.00  E-value=2.3  Score=42.24  Aligned_cols=18  Identities=28%  Similarity=0.344  Sum_probs=15.0

Q ss_pred             CCCceEEEEeCCcccccc
Q 010855          195 VEGHLTLFCDFDWTCTAF  212 (499)
Q Consensus       195 ~~~~~~ii~DFD~TIT~~  212 (499)
                      .+++.+|++|.||||...
T Consensus         4 ~~~~~lI~~DlDGTLL~~   21 (271)
T PRK03669          4 LQDPLLIFTDLDGTLLDS   21 (271)
T ss_pred             cCCCeEEEEeCccCCcCC
Confidence            356789999999999963

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=86.69  E-value=5.8  Score=41.12  Aligned_cols=111  Identities=18%  Similarity=0.158  Sum_probs=67.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcC-C-------CC--ceEEE--eeceEe-eCCe-----
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASG-D-------LN--AFRVH--SNELVY-EESI-----  381 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~-g-------l~--~~~I~--aN~l~~-~~g~-----  381 (499)
                      -+...||+.++++.++++|   .++.|+|.+ ..++++.+++.. |       +.  ...|+  |+...| .++.     
T Consensus       182 yv~~~pgl~elL~~Lr~~G---~klfLvTNS-~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v  257 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHG---KKLFLLTNS-DYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV  257 (343)
T ss_pred             HhccchhHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE
Confidence            4667999999999999999   999999998 467888888774 3       21  12333  333333 1110     


Q ss_pred             --eecccc---------ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHH-hcCc-cEEEcC
Q 010855          382 --STGEIV---------NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLL-EADI-GIVIGS  439 (499)
Q Consensus       382 --~tG~~~---------~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~-~Adi-giv~~~  439 (499)
                        .+|...         +++.+| +-...+.+.+..    .+.+++||||. .+|+...+ .++. .|+|.+
T Consensus       258 ~~~~g~~~~~~~~~l~~g~vY~g-Gn~~~~~~~l~~----~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       258 DVETGSLKWGEVDGLEPGKVYSG-GSLKQFHELLKW----RGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             eCCCCcccCCccccccCCCeEeC-CCHHHHHHHHCC----CCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence              112111         112111 233445555532    24789999997 48998887 7875 454444

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=86.58  E-value=1.4  Score=44.48  Aligned_cols=51  Identities=6%  Similarity=-0.023  Sum_probs=41.6

Q ss_pred             cCCCC-hhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeec
Q 010855          320 HLIFQ-DGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNE  374 (499)
Q Consensus       320 ~i~lr-~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~  374 (499)
                      ++++| ||..++++.++++|   +++.|+|.| +.+.++..|+..|+..  ..|+|+.
T Consensus       145 ~v~irdp~V~EtL~eLkekG---ikLaIvTNg-~Re~v~~~Le~lgL~~yFDvII~~g  198 (303)
T PHA03398        145 PVRIRDPFVYDSLDELKERG---CVLVLWSYG-NREHVVHSLKETKLEGYFDIIICGG  198 (303)
T ss_pred             ccccCChhHHHHHHHHHHCC---CEEEEEcCC-ChHHHHHHHHHcCCCccccEEEECC
Confidence            46778 99999999999999   999999988 4778899999988753  2455653

>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=86.21  E-value=0.61  Score=53.49  Aligned_cols=45  Identities=24%  Similarity=0.294  Sum_probs=36.5

Q ss_pred             CChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          391 ESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       391 ~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +.+..|...+.++.+-     ++.|-+.|||.||--+|+.||+||.+...
T Consensus       836 MsP~qK~~Lie~lQkl-----~y~VgfCGDGANDCgALKaAdvGISLSea  880 (1140)
T KOG0208|consen  836 MSPDQKAELIEALQKL-----GYKVGFCGDGANDCGALKAADVGISLSEA  880 (1140)
T ss_pred             cCchhHHHHHHHHHhc-----CcEEEecCCCcchhhhhhhcccCcchhhh
Confidence            4567888888777652     45677999999999999999999998754

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=84.67  E-value=1.4  Score=43.13  Aligned_cols=38  Identities=29%  Similarity=0.313  Sum_probs=27.2

Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCcc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADIG  434 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adig  434 (499)
                      ...++......+.....++++|||+ .+|+.+...+++.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~  236 (242)
T TIGR01459       198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID  236 (242)
T ss_pred             HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence            3455555555443223579999999 6999999999973

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN02645 phosphoglycolate phosphatase

Probab=83.33  E-value=4.6  Score=41.13  Aligned_cols=86  Identities=21%  Similarity=0.161  Sum_probs=50.2

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccCC--hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      +-||..++++.++++|   .+++++|.+-+  ..-+..-|+..|+..        . .+.+++.        +.    .+
T Consensus        45 ~~~ga~e~l~~lr~~g---~~~~~~TN~~~~~~~~~~~~l~~lGi~~--------~-~~~I~ts--------~~----~~  100 (311)
T PLN02645         45 LIEGVPETLDMLRSMG---KKLVFVTNNSTKSRAQYGKKFESLGLNV--------T-EEEIFSS--------SF----AA  100 (311)
T ss_pred             cCcCHHHHHHHHHHCC---CEEEEEeCCCCCCHHHHHHHHHHCCCCC--------C-hhhEeeh--------HH----HH
Confidence            3488999999999999   99999998721  223333445666421        0 0112221        11    22


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      ..++...+.. ....||++++.+|...+..+++
T Consensus       101 ~~~l~~~~~~-~~~~V~viG~~~~~~~l~~~Gi  132 (311)
T PLN02645        101 AAYLKSINFP-KDKKVYVIGEEGILEELELAGF  132 (311)
T ss_pred             HHHHHhhccC-CCCEEEEEcCHHHHHHHHHCCC
Confidence            2222221111 1235888888889999888875

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]

Probab=81.65  E-value=1.2  Score=49.03  Aligned_cols=45  Identities=24%  Similarity=0.325  Sum_probs=36.3

Q ss_pred             CChhhhHHHHHHHHhhcCCCCCceEE-EEcCCcccHHHHHhcCccEEEcCCc
Q 010855          391 ESPLEKLQAFNDILKDHSNDEQNLTV-YIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       391 ~~g~~K~~~l~~~~~~~~~~~~~~vI-yiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                      .....|.++++.+.++      .+++ ..|||+||-++|+.||+||++.+..
T Consensus       568 VfpehKy~iV~~Lq~r------~hi~gmtgdgvndapaLKkAdigiava~at  613 (942)
T KOG0205|consen  568 VFPEHKYEIVKILQER------KHIVGMTGDGVNDAPALKKADIGIAVADAT  613 (942)
T ss_pred             cCHHHHHHHHHHHhhc------CceecccCCCcccchhhcccccceeeccch
Confidence            3457799999887753      3444 7999999999999999999998753

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=81.47  E-value=1.1  Score=43.16  Aligned_cols=27  Identities=22%  Similarity=0.310  Sum_probs=23.1

Q ss_pred             ce-EEEEcCCcccHHHHHhcCccEEEcC
Q 010855          413 NL-TVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       413 ~~-vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      .+ ++.+|||.||++|+...|..+++..
T Consensus       209 ~r~t~~~GDg~nD~Pl~ev~d~AfiV~~  236 (274)
T COG3769         209 ARTTLGLGDGPNDAPLLEVMDYAFIVKG  236 (274)
T ss_pred             eeEEEecCCCCCcccHHHhhhhheeecc
Confidence            44 6789999999999999998888763

>PRK05157 pyrroloquinoline quinone biosynthesis protein PqqC; Provisional

Probab=81.13  E-value=26  Score=34.64  Aligned_cols=144  Identities=15%  Similarity=0.051  Sum_probs=89.9

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHhCCCCCC--CC-CCChhhHHHHHHHHHHh-cCCccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQK---------LKTLDSLVREWGFELPE--EI-ITDDATVKCTDFLLSTA-SGKVEGEK   73 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E---------~~~h~~~~~~~g~~~~~--~~-~~~~~~~~Yt~~l~~~a-~~~~~~~~   73 (499)
                      .|+++|.+.++.+   ++.+.+|         .++...|.+..|++.++  +. ...|.|+..++-....+ ..++    
T Consensus        67 ~S~c~D~e~Rr~w---~~ri~d~dG~~~~~ghie~Wlrf~ealGl~re~v~s~~~~lP~tr~aVday~~~~r~~~~----  139 (246)
T PRK05157         67 LSNCPDRETRREW---RQRILDHDGDGGGEGGIERWLRLGEAVGLDRDYVLSLRGVLPGVRFAVDAYVNFARRAPW----  139 (246)
T ss_pred             HHcCCCHHHHHHH---HHHHHHhcCCCCCCCcHHHHHHHHHHcCCCHHHHhccccCChHHHHHHHHHHHHHccCCH----
Confidence            5889998887655   3444432         56888999999999875  33 47899999998877777 4665    


Q ss_pred             ccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHH-------HHHHHHHHH
Q 010855           74 VLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQES-------ALQTEELLD  146 (499)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~-------~~~~~~~ld  146 (499)
                                     .+++++++. ..---.|.+.-.+...     ..| .||+.=+=.-|..-       +....+++-
T Consensus       140 ---------------~eavas~lt-E~~~P~I~~~ri~gl~-----~~Y-~~~~~e~l~yF~~h~~~a~~Dvehal~~~l  197 (246)
T PRK05157        140 ---------------LEAVASSLT-ELFAPQIHQERLAGWP-----EHY-PWIDPEGLAYFRSRLTQAPRDVEHGLAYVL  197 (246)
T ss_pred             ---------------HHHHHHHHH-HHhhhHHHHHHHHHHH-----HHC-CCCCHHHHHHHHHHhhccchhHHHHHHHHH
Confidence                           567887776 4333333222221111     123 46654221222111       111222222


Q ss_pred             HHhccCCHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 010855          147 KLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       147 ~l~~~~~~~e~~~~~~~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +.+  .|+++++++.++-+..|..=|.|+|+-+..
T Consensus       198 ~~~--~t~e~q~~al~al~~k~d~Lw~~LDai~~a  230 (246)
T PRK05157        198 DHA--TTREQQERALEALQFKLDVLWSMLDALYMA  230 (246)
T ss_pred             HHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222  366889999999999999999999988764

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=81.04  E-value=1.6  Score=50.78  Aligned_cols=40  Identities=13%  Similarity=0.042  Sum_probs=31.1

Q ss_pred             ChhhhHHHHHHHHhh---cCCCCCceEEEEcCCcccHHHHHhcC
Q 010855          392 SPLEKLQAFNDILKD---HSNDEQNLTVYIGGSPGDLLCLLEAD  432 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~---~~~~~~~~vIyiGDs~tDl~~l~~Ad  432 (499)
                      .+.+|...++.+++.   .+. ....++++||+.||..|+..++
T Consensus       759 ~gvnKG~Al~~Ll~~~~~~g~-~~d~vl~~GDD~nDedMF~~~~  801 (854)
T PLN02205        759 QGVSKGLVAKRLLSIMQERGM-LPDFVLCIGDDRSDEDMFEVIT  801 (854)
T ss_pred             CCCCHHHHHHHHHHHHHhcCC-CcccEEEEcCCccHHHHHHHhh
Confidence            356899999988743   222 2457899999999999999885

>TIGR02111 PQQ_syn_pqqC coenzyme PQQ biosynthesis protein C

Probab=80.53  E-value=32  Score=33.77  Aligned_cols=143  Identities=15%  Similarity=0.066  Sum_probs=88.5

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHhCCCCCC--CCC-CChhhHHHHHHHHHHh-cCCccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQK---------LKTLDSLVREWGFELPE--EII-TDDATVKCTDFLLSTA-SGKVEGEK   73 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E---------~~~h~~~~~~~g~~~~~--~~~-~~~~~~~Yt~~l~~~a-~~~~~~~~   73 (499)
                      -|+++|.+.++.+.   +.+.+|         .++-..|.+..|++.++  +.. ..|.|+..++=....+ ..++    
T Consensus        60 ~s~c~D~e~Rr~wl---~ri~DhdG~~~~~ggie~WlrfaealGl~re~v~s~~~~lP~trfaVday~~f~r~~~~----  132 (239)
T TIGR02111        60 LARCPDPQLRRIWR---QRILDHDGDHEEDGGIERWLRLAEAVGLDREYVLSTRGVLPGTRFAVDAYVHFVREKSL----  132 (239)
T ss_pred             HHcCCCHHHHHHHH---HHHHHhcCCCCCCCcHHHHHHHHHHhCCCHHHHhcccCCCHHHHHHHHHHHHHHhcCCH----
Confidence            47899988776653   444432         56888999999999874  333 4799987777666665 4665    


Q ss_pred             ccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHH-HHH-------H
Q 010855           74 VLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQT-EEL-------L  145 (499)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~-~~~-------l  145 (499)
                                     .++++|++. ...--.|.+.-.+...     ..| .||+.=+=.-|..-..+- .++       +
T Consensus       133 ---------------~eavasslT-E~f~P~I~~~ri~gl~-----~~Y-~~~~~e~l~yF~~r~~qa~rd~e~~l~~~l  190 (239)
T TIGR02111       133 ---------------LEAIASSLT-ELFAPQIHSERVAGML-----QHY-DFIDDAALAYFRKRLTQAPRDVEFGLDYVL  190 (239)
T ss_pred             ---------------HHHHHHHHH-HHHhHHHHHHHHHhHH-----HHC-CCCCHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence                           468888776 4433333332221111     123 576643223343322221 222       3


Q ss_pred             HHHhccCCHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 010855          146 DKLSVLLTGEELEVIKKLYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       146 d~l~~~~~~~e~~~~~~~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +.+   .|.++++++.++-+..|..=|.|+|+-+..
T Consensus       191 ~~~---~t~e~Q~~~l~al~fk~dvLw~~LDal~~a  223 (239)
T TIGR02111       191 DHA---TTREKQEAALEALTFKCDVLWAQLDALYFA  223 (239)
T ss_pred             HHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            433   366888899999999999999999987664

This model describes the coenzyme PQQ (pyrrolo-quinoline-quinone) biosynthesis protein PqqC.In contrast to the broader model pfam05312, this model does not include related proteins likely to be functionally distinct from PqqC, such as homologs found in the Chlamydias.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	499
2qcx_A	263	Transcriptional activator TENA; UP-DOWN bundle, hy	1e-10
2f2g_A	221	SEED maturation protein PM36 homolog; TENA_THI-4 d	1e-10
2a2m_A	258	Hypothetical protein BT3146; putative TENA family	2e-10
3ibx_A	221	TENA, HP1287, putative thiaminase II; vitamin B1,	3e-10
3rm5_A	550	Hydroxymethylpyrimidine/phosphomethylpyrimidine K	7e-10
3no6_A	248	Transcriptional activator TENA; structural genomic	5e-09
1udd_A	226	Transcriptional regulator; helix-bundle, lipid bin	8e-09
1rtw_A	220	Transcriptional activator, putative; PF1337, TENA,	8e-09
2gm8_A	221	TENA homolog/THI-4 thiaminase; transcription, tran	7e-08
3mvu_A	226	TENA family transcriptional regulator; TENA/THI-4/	8e-08
2qzc_A	214	Transcriptional activator TENA-1; heme oxygenase-l	2e-07
1z72_A	225	Transcriptional regulator, putative; structu genom	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	4e-05
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	2e-04
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	3e-04

>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A Length = 263

 Score = 61.4 bits (148), Expect = 1e-10
 Identities = 24/170 (14%), Positives = 48/170 (28%), Gaps = 23/170 (13%)

Query: 10  SHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITD--DATVKCTDFLLSTASG 67
                        +   + ++               E             T  +  +   
Sbjct: 90  KDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSVLS 149

Query: 68  KVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWID 127
               E                   L+A+ PC  L+  + +    LL+ D G  +Y+KWI 
Sbjct: 150 GNFAEI------------------LAALLPCYWLYYEVGE---KLLHCDPGHPIYQKWIG 188

Query: 128 YYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAA 177
            Y    F++   +     D+L+   T E    +K+ +  +      F+  
Sbjct: 189 TYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGM 238

>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A* Length = 221

 Score = 60.5 bits (146), Expect = 1e-10
 Identities = 17/169 (10%), Positives = 50/169 (29%), Gaps = 20/169 (11%)

Query: 7   PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTAS 66
              S +  D   +      +  +++       +W  +    ++   A  +   FL    S
Sbjct: 66  CKDSGESSDMEVVLGGIASLNDEIEWFKREGSKWDVDF-STVVPQRANQEYGRFLEDLMS 124

Query: 67  GKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWI 126
            +V+                     ++A      +++          N            
Sbjct: 125 SEVK-----------------YPVIMTAFWAIEAVYQESFAHCLEDGNKTP--VELTGAC 165

Query: 127 DYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
             + +  F++     + + ++     +GE L   + +  + ++L V F+
Sbjct: 166 HRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLELEVAFW 214

>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A Length = 258

 Score = 60.6 bits (146), Expect = 2e-10
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 26/144 (18%)

Query: 34  DSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLS 93
           ++  + W       +I         D+    A                      + Y   
Sbjct: 130 ETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLA------------------SPYMCV 171

Query: 94  AISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLT 153
            + PC  L+  IA  +      +    LY+ WI++         A Q   +L++      
Sbjct: 172 VMLPCEYLWPWIANFLDGYTPTN---SLYRFWIEWN--GGTPNGAYQMGNMLEQ---YRD 223

Query: 154 GEELEVIKKLYYKAIKLHVNFFAA 177
             + +   +++  A+   +  F +
Sbjct: 224 KIDEDKAVEIFNTAMNYELKVFTS 247

>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A Length = 221

 Score = 59.3 bits (143), Expect = 3e-10
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 90  YTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLS 149
              +A+  C   + VIA+ +  + N  +    Y  WI  Y S+ FQ        LLD L+
Sbjct: 131 EVAAAVLSCGWSYLVIAQNLSQIPNALEH-AFYGHWIKGYSSKEFQACVNWNINLLDSLT 189

Query: 150 VLLTGEELEVIKKLYYKAIKLHVNFF 175
           +  + +E+E +K+++    +    F+
Sbjct: 190 LASSKQEIEKLKEIFITTSEYEYLFW 215

>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Length = 550

 Score = 60.1 bits (146), Expect = 7e-10
 Identities = 21/148 (14%), Positives = 58/148 (39%), Gaps = 22/148 (14%)

Query: 33  LDSLVREWGFELPEEIITDDATVKC---TDFLLSTASGKVEGEKVLGKIETPFEKIKVAA 89
              L   +G + P+              + +    +                ++++  + 
Sbjct: 417 EKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRRG------------NWQELVAS- 463

Query: 90  YTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLS 149
                ++PC+  +     +++  +   +G  +Y +W + Y S  ++E+  + E+LL+ + 
Sbjct: 464 -----LTPCLMGYGEALTKMKGKVTAPEG-SVYHEWCETYASSWYREAMDEGEKLLNHIL 517

Query: 150 VLLTGEELEVIKKLYYKAIKLHVNFFAA 177
                E+L+ +  +Y +  +L  NF+ A
Sbjct: 518 ETYPPEQLDTLVTIYAEVCELETNFWTA 545

>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} Length = 248

 Score = 55.9 bits (134), Expect = 5e-09
 Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 90  YTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLS 149
           +T++A++PC  ++ VI K        +    +  KW  +Y ++   E     ++L+D+L+
Sbjct: 148 FTIAAMAPCPYVYAVIGKRAMEDPKLNKE-SVTSKWFQFYSTE-MDELVDVFDQLMDRLT 205

Query: 150 VLLTGEELEVIKKLYYKAIKLHVNFF 175
              +  E + IK+ + ++     +FF
Sbjct: 206 KHCSETEKKEIKENFLQSTIHERHFF 231

>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3 Length = 226

 Score = 55.1 bits (132), Expect = 8e-09
 Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 25/170 (14%)

Query: 10  SHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKC--TDFLLSTASG 67
           +        I   R  V  +++    L++E    L + I T+   V     DF+L+TA  
Sbjct: 64  AEYPLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYK 123

Query: 68  KVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWID 127
               E                   L+A+ PC   +  IA+  +  L  +    +Y++W  
Sbjct: 124 GNIIEG------------------LTALLPCFWSYAEIAEYHKDKLRDNPI-KIYREWGK 164

Query: 128 YYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFFAA 177
            Y S  +     +  +++D           + +++++    K  + F+  
Sbjct: 165 VYLSNEYLNLVGRLRKIIDSSGH----SGYDRLRRIFITGSKFELAFWEM 210

>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3 Length = 220

 Score = 55.1 bits (132), Expect = 8e-09
 Identities = 16/87 (18%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 89  AYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKL 148
               +A+    + +    K ++  L        Y+++I+++ SQ F E   + E++L+ L
Sbjct: 119 LEGFTALYCEEKAYYEAWKWVRENLKER---SPYQEFINHWSSQEFGEYVKRIEKILNSL 175

Query: 149 SVLLTGEELEVIKKLYYKAIKLHVNFF 175
           +      E E  ++++ +  K  + F+
Sbjct: 176 AEKHGEFEKERAREVFKEVSKFELIFW 202

>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A* Length = 221

 Score = 52.4 bits (125), Expect = 7e-08
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 89  AYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKL 148
              ++A+ PC   +  IA+     L  +   H+YKKW   Y S  ++    +   +LD  
Sbjct: 134 YQCMAALLPCFWSYAEIAERHGGKLRENP-VHVYKKWASVYLSPEYRGLVERLRAVLDS- 191

Query: 149 SVLLTGEELEVIKKLYYKAIKLHVNFF 175
               +G   E +   + +A    + F+
Sbjct: 192 ----SGLSAEELWPYFKEASLYELEFW 214

>3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} Length = 226

 Score = 52.1 bits (124), Expect = 8e-08
 Identities = 31/174 (17%), Positives = 55/174 (31%), Gaps = 30/174 (17%)

Query: 10  SHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITD--DATVKCTDFLLSTASG 67
               E   A+  +   V ++++    +    G        T      +  T F+L     
Sbjct: 69  ETHSEMLAAVGTVNALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYS 128

Query: 68  KVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWID 127
               +                   L+A++PC+  +  I K     L  +  S LY  WID
Sbjct: 129 GDLLDL------------------LAALAPCVMGYGEIGKR----LTAEATSTLYGDWID 166

Query: 128 YYCSQSFQESALQTEELLDKLSVLLTG------EELEVIKKLYYKAIKLHVNFF 175
            Y    +Q +      LLD       G           + + ++ A +L V F+
Sbjct: 167 TYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGFW 220

>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2} Length = 214

 Score = 50.8 bits (121), Expect = 2e-07
 Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 32/170 (18%)

Query: 8   SLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIIT--DDATVKCTDFLLSTA 65
           S    ++    +  +     + L+T   L  +        + T  +      T  L   A
Sbjct: 64  SKGPIDKVTKILNLVFSSRDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYA 123

Query: 66  SGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKW 125
           +                         L A +PCM  + ++   +      D  + +YK W
Sbjct: 124 NLDW-------------------NKFLVAWTPCMFGYSIVGDYV-----IDSPNEVYKTW 159

Query: 126 IDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
             +Y S  +++        LD++S        E +  ++  +++  + F+
Sbjct: 160 ASFYASTEYKKRIEAILYALDEVS------ITEDLLNIFINSVRFEIGFW 203

>1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A Length = 225

 Score = 47.4 bits (112), Expect = 3e-06
 Identities = 14/87 (16%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 89  AYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKL 148
           A+ L  +     L+     +           +++ +WI+ +    F E      + L+++
Sbjct: 139 AHLLVMLVIAEGLYLDWGSK----DLALPEVYIHSEWINLHRGPFFAEWVQFLVDELNRV 194

Query: 149 SVLLTGEELEVIKKLYYKAIKLHVNFF 175
                 E+L  +++ + +A+ L + FF
Sbjct: 195 GK--NREDLTELQQRWNQAVALELAFF 219

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 1e-05
 Identities = 72/451 (15%), Positives = 136/451 (30%), Gaps = 157/451 (34%)

Query: 7   PSLSHDEEDKLAIRKL--RKRVKQKLKTLDSLVREWGFELPEEIITDDA-TVKCTDFLLS 63
               H  + +L  R+L   K  +  L  L + V+        +    +A  + C   LL+
Sbjct: 224 KLRIHSIQAEL--RRLLKSKPYENCLLVLLN-VQNA------KAW--NAFNLSCK-ILLT 271

Query: 64  TASGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYK 123
           T   +V             + +  A  T            +        L PD+   L  
Sbjct: 272 TRFKQV------------TDFLSAATTT-----------HISLDHHSMTLTPDEVKSLLL 308

Query: 124 KWIDYYCS-QSFQESALQTEELLDKLSVLLTGEELEVIKKL--YYKAIKLHVNFFAAQPV 180
           K++D  C  Q      L T      LS++   E +         +K    HVN       
Sbjct: 309 KYLD--CRPQDLPREVLTTNPRR--LSII--AESIRDGLATWDNWK----HVNC-----D 353

Query: 181 KQQTTVPLSW-VKDPVEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLT 239
           K  T +  S  V +P E +  +F             S+    A +               
Sbjct: 354 KLTTIIESSLNVLEPAE-YRKMFDRL----------SVFPPSAHIPTI------------ 390

Query: 240 WMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAEFEYEGLCE-----------ALKQ 288
                       +LS  + +  +  +  +++     +     L E           ++  
Sbjct: 391 ------------LLSLIWFDVIKSDVMVVVN-----KLHKYSLVEKQPKESTISIPSI-Y 432

Query: 289 LAYFEKNEN-----SRVVQS-GVLKGLNLEDIK-------WASQ---HL----------- 321
           L    K EN       +V    + K  + +D+        + S    HL           
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492

Query: 322 ---IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVH--SNELV 376
              +F D   RF +  I+  +        ++   G ++ +      L  ++ +   N+  
Sbjct: 493 FRMVFLD--FRFLEQKIRHDS-------TAWNASGSILNTL---QQLKFYKPYICDNDPK 540

Query: 377 YEESISTGEIVNKLESPLEKL--QAFNDILK 405
           YE  ++   I++ L    E L    + D+L+
Sbjct: 541 YERLVNA--ILDFLPKIEENLICSKYTDLLR 569

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 75/469 (15%), Positives = 151/469 (32%), Gaps = 125/469 (26%)

Query: 120 HLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVI------------------- 160
           + YK  +  +   +F ++    +++ D    +L+ EE++ I                   
Sbjct: 16  YQYKDILSVF-EDAFVDN-FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLS 73

Query: 161 --KKLYYKAIK--LHVNF-FAAQPVKQQTTVPLSWVKDPVEGHLTLFCDFDWTCTAFDSS 215
             +++  K ++  L +N+ F   P+K +   P    +  +E    L+ D       ++ S
Sbjct: 74  KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ-VFAKYNVS 132

Query: 216 SILAELAIVTA-QKSDPDQS--------EGKLTWMSSADLRNT-----------WDVLST 255
            +   L +  A  +  P ++         GK TW++     +            W  L+ 
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGK-TWVALDVCLSYKVQCKMDFKIFW--LNL 189

Query: 256 KYTEEYEQCIESIMSSEAVAEFEYEGLCE---ALKQLAYFEKNENSRVVQSGVLKG--LN 310
           K     E  +E +       +  +    +    +K   +  + E  R+++S   +   L 
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249

Query: 311 LEDIKWASQHL-IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFR 369
           L ++   ++    F   C+      + +T FK     LS         +  +        
Sbjct: 250 LLNV-QNAKAWNAFNLSCK-----ILLTTRFKQVTDFLS-----AATTTHISLDH----- 293

Query: 370 VHSNELVYEESIS-----TGEIVNKL--E----SPL------EKLQAFNDILK--DHSND 410
            HS  L  +E  S            L  E    +P       E ++          H N 
Sbjct: 294 -HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 411 EQNLTVYIGGS-----PGDL------LCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLF- 458
           ++ LT  I  S     P +       L +      I    +  L  +      S V +  
Sbjct: 353 DK-LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI---PTILLSLIWFDVIKSDVMVVV 408

Query: 459 -----SSLVERQKELVDGSSYKWKRLPGTLY-----TVSSWAEIHAFIL 497
                 SLVE+Q      S+     +P  +Y      + +   +H  I+
Sbjct: 409 NKLHKYSLVEKQP---KESTI---SIPS-IYLELKVKLENEYALHRSIV 450

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 30/144 (20%), Positives = 50/144 (34%), Gaps = 10/144 (6%)

Query: 292 FEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCW 351
           F ++   RV     L GL    I   +  L    G R   + T++   +   V    +  
Sbjct: 229 FAQSLQQRV---ATLAGLPATVIDEVAGQLELMPGARTTLR-TLRRLGYACGVVSGGFRR 284

Query: 352 CGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDE 411
             + +       +L    V +NEL   +   TG +V  +     K  A  +  +      
Sbjct: 285 IIEPLAE-----ELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPM 339

Query: 412 QNLTVYIGGSPGDLLCLLEADIGI 435
              TV +G    D+  L  A +GI
Sbjct: 340 AQ-TVAVGDGANDIDMLAAAGLGI 362

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 10/144 (6%)

Query: 292 FEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCW 351
           F K+   RV     LK + L+  K   + L   +G        +K  N+K       +  
Sbjct: 48  FHKSLILRV---SKLKNMPLKLAKEVCESLPLFEGALELVS-ALKEKNYKVVCFSGGFDL 103

Query: 352 CGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDE 411
             +  R       L+     SN L+ E     G +   +     K +    + +  +  +
Sbjct: 104 ATNHYRD-----LLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLLNISK 158

Query: 412 QNLTVYIGGSPGDLLCLLEADIGI 435
            N T+ +G    DL     A I I
Sbjct: 159 TN-TLVVGDGANDLSMFKHAHIKI 181

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 41/248 (16%), Positives = 83/248 (33%), Gaps = 49/248 (19%)

Query: 204 DFDWTCTAFDSSSILAELAI-----VTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYT 258
            ++      + +S    +           +  PD ++  L  +         D+ ST   
Sbjct: 70  RYEVALMDGELTSEHETILKALELDYARIQDVPDLTKPGLIVL---------DMDSTAIQ 120

Query: 259 EEYEQCIESIMS----SEAVAEFEYEGLC------EALKQLAYFEKNENSRVVQSGVLKG 308
            E   CI+ I       E VAE     +       ++L+           RV     LK 
Sbjct: 121 IE---CIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRL----------RV---SKLKD 164

Query: 309 LNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAF 368
              + +    + L            T+ +  +K  +    + +  D ++       L+  
Sbjct: 165 APEQILSQVRETLPLMPELPELVA-TLHAFGWKVAIASGGFTYFSDYLKE-----QLSLD 218

Query: 369 RVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIG-GSPGDLLC 427
              SN L       TG+++ ++ S   K      + + +  +  N TV +G G+  DL+ 
Sbjct: 219 YAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHN-TVAVGDGA-NDLVM 276

Query: 428 LLEADIGI 435
           +  A +G+
Sbjct: 277 MAAAGLGV 284

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	499
3no6_A	248	Transcriptional activator TENA; structural genomic	99.97
3ibx_A	221	TENA, HP1287, putative thiaminase II; vitamin B1,	99.97
4fn6_A	229	Thiaminase-2, thiaminase II; alpha-helix, vitamin	99.97
3mvu_A	226	TENA family transcriptional regulator; TENA/THI-4/	99.97
2qcx_A	263	Transcriptional activator TENA; UP-DOWN bundle, hy	99.96
1z72_A	225	Transcriptional regulator, putative; structu genom	99.96
1rtw_A	220	Transcriptional activator, putative; PF1337, TENA,	99.96
3rm5_A	550	Hydroxymethylpyrimidine/phosphomethylpyrimidine K	99.96
2f2g_A	221	SEED maturation protein PM36 homolog; TENA_THI-4 d	99.96
2gm8_A	221	TENA homolog/THI-4 thiaminase; transcription, tran	99.96
1wwm_A	190	Hypothetical protein TT2028; TENA/THI-4 family, pu	99.96
2qzc_A	214	Transcriptional activator TENA-1; heme oxygenase-l	99.95
1udd_A	226	Transcriptional regulator; helix-bundle, lipid bin	99.95
2a2m_A	258	Hypothetical protein BT3146; putative TENA family	99.94
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.87
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.86
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.78
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.77
4gxt_A	385	A conserved functionally unknown protein; structur	99.74
3oql_A	262	TENA homolog; transcriptional activator, structura	99.74
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.72
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.68
1rcw_A	231	CT610, CADD; iron, DI-iron, redox enzyme, metallo	99.63
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.62
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.59
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.56
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	99.46
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.44
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.35
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.31
3hlx_A	258	Pyrroloquinoline-quinone synthase; PQQC, PQQ biosy	99.23
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.2
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.19
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.19
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.17
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.14
3dde_A	239	TENA/THI-4 protein, domain of unknown function WI	99.14
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.12
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.09
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.08
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.07
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.07
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.06
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.05
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.05
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.05
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.04
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.04
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.04
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.02
2hsz_A	243	Novel predicted phosphatase; structural genomics,	98.98
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	98.97
1te2_A	226	Putative phosphatase; structural genomics, phospha	98.97
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.96
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	98.95
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.95
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	98.94
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	98.93
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	98.92
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	98.91
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	98.91
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	98.91
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	98.9
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	98.9
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	98.89
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	98.87
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.87
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	98.86
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	98.85
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	98.84
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	98.82
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	98.82
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	98.81
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.79
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.79
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	98.79
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	98.77
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	98.77
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	98.76
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	98.75
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	98.75
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	98.71
3bjd_A	332	Putative 3-oxoacyl-(acyl-carrier-protein) synthas;	98.71
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	98.69
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.67
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	98.67
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.1
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	98.65
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	98.64
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.6
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	98.56
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.56
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.49
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	98.47
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	98.47
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.47
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.46
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	98.45
2zg6_A	220	Putative uncharacterized protein ST2620, probable	98.4
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.38
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.38
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.36
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	98.35
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.35
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.3
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.3
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.26
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.23
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.21
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.21
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.2
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.2
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.2
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.19
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.19
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.18
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	98.18
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.17
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.17
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	98.15
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	98.15
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.14
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.14
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.13
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.1
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.07
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	98.06
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.05
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	98.01
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.0
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	97.97
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.96
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	97.94
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.86
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	97.85
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	97.79
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	97.68
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	97.51
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.48
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.47
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	97.43
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	97.43
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.2
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.16
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	97.13
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.09
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	96.86
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	96.85
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	96.83
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.83
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	96.82
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	96.81
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	96.79
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	96.75
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	96.67
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	96.6
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	96.54
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	96.45
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	96.29
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.64
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.6
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	95.01
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	94.72
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	94.72
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	94.7
3b5o_A	244	CADD-like protein of unknown function; structural	93.59
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	92.32
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	92.28
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	91.23
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	88.87
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	88.14
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	87.32
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	86.1

>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0

Probab=99.97  E-value=6.1e-32  Score=264.64  Aligned_cols=154  Identities=16%  Similarity=0.229  Sum_probs=141.4

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCC---CCCCCChhhHHHHHHHHHHh-c-CCcccccccccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELP---EEIITDDATVKCTDFLLSTA-S-GKVEGEKVLGKIET   80 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~---~~~~~~~~~~~Yt~~l~~~a-~-~~~~~~~~~~~~~~   80 (499)
                      ++||+|.+++..+...+..+. +|+++|+.++++||++.+   +..+++|+|.+||+||++++ . |++           
T Consensus        78 ~aka~~~~~~~~~~~~~~~~~~~E~~lh~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~ll~~a~~~g~~-----------  146 (248)
T 3no6_A           78 IPKMSSMEDVKFLVEQIEFMLEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAFARENA-----------  146 (248)
T ss_dssp             GGGCSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHTTSCHHHHCCSCCCCHHHHHHHHHHHHHHHHCSST-----------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHHhcCCCH-----------
Confidence            899999999999999998876 799999999999999865   35688999999999999999 6 776           


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHH
Q 010855           81 PFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVI  160 (499)
Q Consensus        81 ~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~  160 (499)
                              +++++||+||+|+|++||+++.+..... ++++|++||++|+ ++|.+.|.+++++||++++.++++++++|
T Consensus       147 --------~~~laAl~PC~w~Y~eig~~l~~~~~~~-~~~~Y~~WI~~Y~-~ef~~~v~~~~~~ld~~~~~~s~~~~~~l  216 (248)
T 3no6_A          147 --------AFTIAAMAPCPYVYAVIGKRAMEDPKLN-KESVTSKWFQFYS-TEMDELVDVFDQLMDRLTKHCSETEKKEI  216 (248)
T ss_dssp             --------HHHHHHHTHHHHHHHHHHHHHHHCTTCC-TTSTTHHHHHHHH-HHTHHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCchHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCCHHHHHHH
Confidence                    6899999999999999999998753322 5799999999999 99999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCC
Q 010855          161 KKLYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       161 ~~~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +++|.++|+||++||+|||..
T Consensus       217 ~~~F~~a~~lE~~Fwd~ay~~  237 (248)
T 3no6_A          217 KENFLQSTIHERHFFNMAYIN  237 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999999874

>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A

Probab=99.97  E-value=3.2e-32  Score=262.57  Aligned_cols=154  Identities=19%  Similarity=0.300  Sum_probs=141.1

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++|++|.+.+..+...+..+. +|+++|+.+++.||++.++  ..+++|+|.+||+||++++ .|++             
T Consensus        63 ~aka~~~~~~~~~~~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a~~~~~-------------  129 (221)
T 3ibx_A           63 VVKACDEAVMREFSNAIQDILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGSI-------------  129 (221)
T ss_dssp             HHHCCSHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHHHSCH-------------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhccCCHHHHHHHHHHHHHHhcCCH-------------
Confidence            789999999999999988876 7999999999999999764  6789999999999999999 5775             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|.+||+++.+.... .++|+|++||++|+|++|.+.|.+++++||++++.++++++++|++
T Consensus       130 ------~~~~aAl~pc~~~Y~~ig~~l~~~~~~-~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~  202 (221)
T 3ibx_A          130 ------KEVAAAVLSCGWSYLVIAQNLSQIPNA-LEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSKQEIEKLKE  202 (221)
T ss_dssp             ------HHHHHHTHHHHHHHHHHHHHHTCSSST-TTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence                  689999999999999999999864322 2689999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCC
Q 010855          163 LYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~~  180 (499)
                      +|.++|+||++||+|||.
T Consensus       203 ~F~~a~~lE~~Fwd~a~~  220 (221)
T 3ibx_A          203 IFITTSEYEYLFWDMAYQ  220 (221)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999999975

>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}

Probab=99.97  E-value=1.7e-31  Score=258.82  Aligned_cols=155  Identities=18%  Similarity=0.254  Sum_probs=141.4

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCC---CCCCCChhhHHHHHHHHHHh-c-CCcccccccccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELP---EEIITDDATVKCTDFLLSTA-S-GKVEGEKVLGKIET   80 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~---~~~~~~~~~~~Yt~~l~~~a-~-~~~~~~~~~~~~~~   80 (499)
                      ++||+|.+++..+...+..+. +|+++|+.+++.||++.+   +..+++|+|.+||+||++++ . |++           
T Consensus        59 ~aka~~~~~~~~~~~~~~~~~~~E~~~h~~~~~~~gi~~~~~~~~~~~~p~~~aY~~~l~~~a~~~~~~-----------  127 (229)
T 4fn6_A           59 IPKMNSMNDVKFLVEQIEFMVEGEVLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSRENA-----------  127 (229)
T ss_dssp             STTCCSHHHHHHHHHHHHHHHSCCCHHHHHHHHHHTSCHHHHHHSCCCCHHHHHHHHHHHHHHHHCCSH-----------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHHhhcCCH-----------
Confidence            899999999999999998876 799999999999999875   34689999999999999999 6 775           


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHH
Q 010855           81 PFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVI  160 (499)
Q Consensus        81 ~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~  160 (499)
                              +++++||+||+|+|++||+++.+..... ++|+|++||++|+ ++|.+.|.+++++||++++.++++++++|
T Consensus       128 --------~~~~aAl~pC~~~Y~~ig~~l~~~~~~~-~~~~y~~WI~~y~-~~f~~~v~~~~~~ld~~~~~~~~~~~~~~  197 (229)
T 4fn6_A          128 --------IYTIAAMAPCPYIYAELAKRSQSDHKLN-REKDTAKWFDFYS-TEMDDIINVFESLMNKLAESMSDKELEQV  197 (229)
T ss_dssp             --------HHHHHHHTHHHHHHHHHHHHHHTCTTCC-TTSTHHHHHHHHT-TTTHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHHcCCCC-CCChHHHHHHHHh-HHHHHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence                    7899999999999999999998653322 5789999999999 99999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCC
Q 010855          161 KKLYYKAIKLHVNFFAAQPVKQ  182 (499)
Q Consensus       161 ~~~F~~a~~lE~~Fw~~a~~~~  182 (499)
                      +++|.++|+||++||+|||..+
T Consensus       198 ~~~F~~a~~lE~~Fwd~a~~~~  219 (229)
T 4fn6_A          198 KQVFLESCIHERRFFNMAMTLE  219 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999999999999998753

>3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0

Probab=99.97  E-value=2e-31  Score=257.79  Aligned_cols=151  Identities=21%  Similarity=0.333  Sum_probs=139.9

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++||+|.+++.++...+..+. +|+++|+.+++.||++.++  ..+++|+|.+||+||++++ +|++             
T Consensus        65 ~aka~~~~~~~~~~~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a~~~~~-------------  131 (226)
T 3mvu_A           65 VVKSETHSEMLAAVGTVNALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYSGDL-------------  131 (226)
T ss_dssp             HHTCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHSCH-------------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHHhcCCH-------------
Confidence            789999999999999998888 5999999999999998764  6788999999999999999 5775             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHH-----HHhc-cCCHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLD-----KLSV-LLTGEE  156 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld-----~l~~-~~~~~e  156 (499)
                            +++++||+||+|+|.+||+++.+..    ++|+|++||++|+|++|.+.|.+++++||     +++. .+++++
T Consensus       132 ------~~~~aAl~pc~~~Y~~ig~~l~~~~----~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~  201 (226)
T 3mvu_A          132 ------LDLLAALAPCVMGYGEIGKRLTAEA----TSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPR  201 (226)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHHHC----SCSTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCTTGGGSHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHcCCHHHHHHHHHHHHHHCchhHHHHhhhccChHH
Confidence                  6899999999999999999998752    46899999999999999999999999999     9988 888999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCC
Q 010855          157 LEVIKKLYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       157 ~~~~~~~F~~a~~lE~~Fw~~a~~  180 (499)
                      +++|+++|.++|+||++||||||.
T Consensus       202 ~~~~~~~F~~a~~lE~~Fwd~a~~  225 (226)
T 3mvu_A          202 WSRLCQTFHTATELEVGFWQMGLT  225 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999999999985

>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A

Probab=99.96  E-value=8.7e-30  Score=251.61  Aligned_cols=153  Identities=16%  Similarity=0.224  Sum_probs=140.9

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++||+|.+++.++...+..+. +|+.+|+.+++.||++.++  +.+++|+|.+||+||++++ .|++             
T Consensus        86 ~aka~~~~~~~~l~~~i~~~~~~E~~lh~~~~~~~Gi~~~~l~~~~~~pat~aYt~~l~~~a~~g~~-------------  152 (263)
T 2qcx_A           86 AAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSVLSGNF-------------  152 (263)
T ss_dssp             HHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHSCCCCHHHHHHHHHHHHHHTTTCH-------------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCCH-------------
Confidence            789999999999999998876 6999999999999999764  6789999999999999999 5665             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|.+||+++.+...   ++++|++||++|+|++|.+.+.+++++||++++.++++++++|.+
T Consensus       153 ------~~~laAl~pC~w~Y~~ig~~l~~~~~---~~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~~~~s~~~~~~l~~  223 (263)
T 2qcx_A          153 ------AEILAALLPCYWLYYEVGEKLLHCDP---GHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKE  223 (263)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHTTCCC---CSHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHhccC---CCcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence                  78999999999999999999976433   469999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCC
Q 010855          163 LYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +|.++|+||++|||++|..
T Consensus       224 ~F~~a~~lE~~Fwd~a~~~  242 (263)
T 2qcx_A          224 NFVISSYYEYQFWGMAYRK  242 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999874

>1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A

Probab=99.96  E-value=3.8e-29  Score=241.63  Aligned_cols=149  Identities=15%  Similarity=0.132  Sum_probs=134.2

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++||+|.+++..+...+..+. +|+.+|+.+++.||++.++  +.+++|+|.+||+||++++ +|++             
T Consensus        72 ~~ka~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~~-------------  138 (225)
T 1z72_A           72 VAHADKLESKLRFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSDY-------------  138 (225)
T ss_dssp             HHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHHHHTCH-------------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhcCCCHHHHHHHHHHHHHHccCCH-------------
Confidence            789999999999999988866 7999999999999999864  6789999999999999999 5775             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|.+||++ .+.   .+++++|++||++|+|++|.+.+.+++++||+++.. +++++ +|++
T Consensus       139 ------~~~~aAl~pc~~~Y~~i~~~-~~~---~~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~~~~-~~~~~-~~~~  206 (225)
T 1z72_A          139 ------AHLLVMLVIAEGLYLDWGSK-DLA---LPEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGKN-REDLT-ELQQ  206 (225)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHTC-SSC---CCSSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC--CCCHH-HHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHh-hcc---CCCcchHHHHHHHhCCHHHHHHHHHHHHHHHHHHcC-CHHHH-HHHH
Confidence                  68999999999999999998 432   225689999999999999999999999999999988 88888 9999


Q ss_pred             HHHHHHHHHHHhcCCCCC
Q 010855          163 LYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~~  180 (499)
                      +|.++|+||++|||++|.
T Consensus       207 ~f~~a~~lE~~Fwd~a~~  224 (225)
T 1z72_A          207 RWNQAVALELAFFDIGYD  224 (225)
T ss_dssp             HHHHHHHHHHHHTTTTC-
T ss_pred             HHHHHHHHHHHHHHHhhc
Confidence            999999999999999974

>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3

Probab=99.96  E-value=7e-29  Score=238.99  Aligned_cols=147  Identities=19%  Similarity=0.194  Sum_probs=135.0

Q ss_pred             cCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEED---KLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~---~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++||+|.+.   +.++...+..+  |+++|+  ++.+|++.  +.+++|+|.+||+||++++ +|++             
T Consensus        58 ~~ka~~~~~~~~~~~l~~~~~~i--E~~lh~--~~~~Gi~~--~~~~~p~t~aY~~~l~~~a~~~~~-------------  118 (220)
T 1rtw_A           58 MAKAPDDLLPFFAESIYYISKEL--EMFEKK--AQELGISL--NGEIDWRAKSYVNYLLSVASLGSF-------------  118 (220)
T ss_dssp             HHHSCGGGHHHHHHHHHHHHHHH--HHHHHH--HHHTTCCS--SSCCCHHHHHHHHHHHHHHHHSCH-------------
T ss_pred             HHhCCChhhHHHHHHHHHHHHHH--HHHHHH--HHHCCCCC--CCCCCHHHHHHHHHHHHHHccCCH-------------
Confidence            688999988   99999999887  999999  89999998  4789999999999999999 5775             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|.+||+++.+...   ++++|++||++|+|++|.+.+.+++++||++++.++++++++|++
T Consensus       119 ------~~~laAl~pc~~~Y~~i~~~l~~~~~---~~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~  189 (220)
T 1rtw_A          119 ------LEGFTALYCEEKAYYEAWKWVRENLK---ERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERARE  189 (220)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHHHCS---SCCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHhccC---CCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence                  68999999999999999999987543   458999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCC
Q 010855          163 LYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +|+++|+||++|||+++..
T Consensus       190 ~f~~a~~lE~~Fwd~a~~~  208 (220)
T 1rtw_A          190 VFKEVSKFELIFWDIAYGG  208 (220)
T ss_dssp             HHHHHHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999874

>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}

Probab=99.96  E-value=3.4e-29  Score=271.65  Aligned_cols=154  Identities=17%  Similarity=0.295  Sum_probs=139.5

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCC-CCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccch
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQKLKTLDS-LVREWGF-ELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETP   81 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E~~~h~~-~~~~~g~-~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~   81 (499)
                      ++||+|.+++.++...++.+.+|+++|+. ++++||+ +.++  ..+++|+|.+||+||++++ +|++            
T Consensus       390 ~aka~~~~~~~~~~~~~~~i~~E~~~h~~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~l~~~a~~g~~------------  457 (550)
T 3rm5_A          390 GSKAPCLEDMEKELVIVGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRRGNW------------  457 (550)
T ss_dssp             HHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCTTTTTSCCCCHHHHHHHHHHHHHHHHSCH------------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCCCHHHHHHHHHHHHHHccCCH------------
Confidence            78999999999999999999999999999 6669999 6553  6788999999999999999 5775            


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHH
Q 010855           82 FEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIK  161 (499)
Q Consensus        82 ~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~  161 (499)
                             +++++||+||+|+|++||+++.+.... .++|+|++||++|+|++|.++|++++++||++++.++++++++|+
T Consensus       458 -------~~~~aAl~pC~~~Y~~ig~~l~~~~~~-~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~l~  529 (550)
T 3rm5_A          458 -------QELVASLTPCLMGYGEALTKMKGKVTA-PEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPPEQLDTLV  529 (550)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHTTTTCCCS-CTTSHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTSCGGGHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHHhccCC-CCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence                   689999999999999999998754221 257899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCC
Q 010855          162 KLYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       162 ~~F~~a~~lE~~Fw~~a~~  180 (499)
                      ++|.++|+||++||||||.
T Consensus       530 ~~F~~a~~lE~~Fwd~a~~  548 (550)
T 3rm5_A          530 TIYAEVCELETNFWTAALE  548 (550)
T ss_dssp             HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999975

>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*

Probab=99.96  E-value=3.3e-29  Score=241.36  Aligned_cols=150  Identities=9%  Similarity=0.106  Sum_probs=135.5

Q ss_pred             cCCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHH-h-cCCcccccccccccc
Q 010855            7 PSLSHDEED----KLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLST-A-SGKVEGEKVLGKIET   80 (499)
Q Consensus         7 ~~~a~d~~~----~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~-a-~~~~~~~~~~~~~~~   80 (499)
                      ++||+|.++    +..+...+..+.+|+++|+.+++.||++. ++.+++|+|.+||+||+++ + +|++           
T Consensus        62 ~~ka~~~~~~~~~~~~l~~~~~~~~~E~~~h~~~~~~~Gi~~-~~~~~~p~~~aY~~~l~~~~~~~~~~-----------  129 (221)
T 2f2g_A           62 LIRACKDSGESSDMEVVLGGIASLNDEIEWFKREGSKWDVDF-STVVPQRANQEYGRFLEDLMSSEVKY-----------  129 (221)
T ss_dssp             HHHHHHSCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCCCHHHHHHHHHHHHTTSTTSCH-----------
T ss_pred             HHhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh-hhcCCCHHHHHHHHHHHHhhccCCCH-----------
Confidence            567777777    88888888777789999999999999997 4578999999999999999 8 5775           


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh--hcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHH
Q 010855           81 PFEKIKVAAYTLSAISPCMRLFEVIAKEIQA--LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELE  158 (499)
Q Consensus        81 ~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~--~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~  158 (499)
                              +++++||+||+|+|.+||+++.+  ...   + ++|++||++|+|++|.+.+.+++++||++++.+++++++
T Consensus       130 --------~~~~aAl~pc~~~Y~~i~~~l~~~~~~~---~-~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~  197 (221)
T 2f2g_A          130 --------PVIMTAFWAIEAVYQESFAHCLEDGNKT---P-VELTGACHRWGNDGFKQYCSSVKNIAERCLENASGEVLG  197 (221)
T ss_dssp             --------HHHHHHHHHHHHHHHHHTTTHHHHHHTS---S-SCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHhccCCC---C-cHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHH
Confidence                    78999999999999999999976  432   3 389999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCC
Q 010855          159 VIKKLYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       159 ~~~~~F~~a~~lE~~Fw~~a~~  180 (499)
                      +|.++|+++|+||++|||++|.
T Consensus       198 ~~~~~f~~a~~lE~~Fwd~a~~  219 (221)
T 2f2g_A          198 EAEDVLVRVLELEVAFWEMSRG  219 (221)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999986

>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A*

Probab=99.96  E-value=2.4e-29  Score=242.43  Aligned_cols=149  Identities=21%  Similarity=0.315  Sum_probs=133.9

Q ss_pred             cCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKR-VKQKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~-i~~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++||+|.+++.++...+.. +.+|+++|+.+++.||++.++  +.+++|+|.+||+||++++ +|++             
T Consensus        67 ~~ka~~~~~~~~l~~~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~~-------------  133 (221)
T 2gm8_A           67 ASRAPSVDLMKTALELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEGF-------------  133 (221)
T ss_dssp             HHTCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSCH-------------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCCH-------------
Confidence            7899999999999999988 557999999999999998764  6789999999999999998 5775             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|.+||+++.+..... ++++|++||++|+|++|.+.+.+++++||++     ++++++|.+
T Consensus       134 ------~~~laAl~pc~~~Y~~ig~~l~~~~~~~-~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~~~~~  201 (221)
T 2gm8_A          134 ------YQCMAALLPCFWSYAEIAERHGGKLREN-PVHVYKKWASVYLSPEYRGLVERLRAVLDSS-----GLSAEELWP  201 (221)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGGGGC-CCHHHHHHHHHHHSHHHHHHHHHHHHHHHTS-----SCCHHHHHH
T ss_pred             ------HHHHHHHHhHHHHHHHHHHHHHhccCCC-CCchHHHHHHHhCCHHHHHHHHHHHHHHHHh-----hHHHHHHHH
Confidence                  6899999999999999999997653211 4699999999999999999999999999998     457789999


Q ss_pred             HHHHHHHHHHHhcCCCCC
Q 010855          163 LYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~~  180 (499)
                      +|.++|+||++|||++|.
T Consensus       202 ~f~~a~~lE~~Fwd~a~~  219 (221)
T 2gm8_A          202 YFKEASLYELEFWQAAYE  219 (221)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999999975

>1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3

Probab=99.96  E-value=1.3e-28  Score=231.90  Aligned_cols=138  Identities=9%  Similarity=-0.023  Sum_probs=126.2

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHhcCCcccccccccccchhhhhh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIK   86 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a~~~~~~~~~~~~~~~~~~~~~   86 (499)
                      ++||+|.+ +..+...+..+.+|    +++++++||+.  +.+++|+|.+||+||++++.|++                 
T Consensus        53 ~~ka~~~~-~~~~~~~~~~~~~E----~~~~~~~gi~~--~~~~~p~~~aY~~~l~~~a~~~~-----------------  108 (190)
T 1wwm_A           53 LLEAPQAH-RAPLVQALMATVEE----LDWLLLQGASP--SAPVHPVRAGYIALLEEMGRLPY-----------------  108 (190)
T ss_dssp             HHHCCHHH-HHHHHHHHHHHHHH----HHHHHTTTCCS--SSCCCHHHHHHHHHHHHHHHSCH-----------------
T ss_pred             HHcCChHH-HHHHHHHHHHHHHH----HHHHHHcCCCC--CCCCCHHHHHHHHHHHHHcCCCH-----------------
Confidence            78999999 99999999888767    78999999997  47889999999999999988654                 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 010855           87 VAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYK  166 (499)
Q Consensus        87 ~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~F~~  166 (499)
                        +++++||+||+|+|.+||+++.+      ++|+|++||++|+|++|.+.|.++++++|++++..++++   |+++|.+
T Consensus       109 --~~~~aAl~pc~~~Y~~ig~~l~~------~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~---~~~~F~~  177 (190)
T 1wwm_A          109 --AYRVVFFYFLNGLFLEAWAHHVP------EEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEV---VRTYLRR  177 (190)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHSC------SSSHHHHHHHHHSCTTHHHHHHHHHHHHHHHHTTSCHHH---HHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhcc------CCcHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhCCHHH---HHHHHHH
Confidence              78999999999999999999864      357999999999999999999999999999999888777   9999999


Q ss_pred             HHHHHHHhcCCCC
Q 010855          167 AIKLHVNFFAAQP  179 (499)
Q Consensus       167 a~~lE~~Fw~~a~  179 (499)
                      +|+||++|||++|
T Consensus       178 a~~lE~~Fwd~a~  190 (190)
T 1wwm_A          178 ILEAEKATWSLLL  190 (190)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhhC
Confidence            9999999999986

>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2}

Probab=99.95  E-value=7.8e-29  Score=237.64  Aligned_cols=148  Identities=17%  Similarity=0.232  Sum_probs=132.2

Q ss_pred             cCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHhcCCcccccccccccchhh
Q 010855            7 PSLSHDEEDKLAIRKLRKR-VKQKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFE   83 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~-i~~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a~~~~~~~~~~~~~~~~~~   83 (499)
                      ++|| |.+++..+...+.. +.+|+++|+.+++.||++.++  +.+++|+|.+||+||++++..++              
T Consensus        63 ~~ka-~~~~~~~~~~~~~~~i~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~--------------  127 (214)
T 2qzc_A           63 SSKG-PIDKVTKILNLVFSSRDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYANLDW--------------  127 (214)
T ss_dssp             HTTS-CHHHHHHHHHHHTCC--CHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHCH--------------
T ss_pred             HHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCH--------------
Confidence            7899 99999999999887 668999999999999999764  67899999999999999983354              


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 010855           84 KIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKL  163 (499)
Q Consensus        84 ~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~  163 (499)
                           +++++||+||+|+|.+||+++.+.     ++|+|++||++|+|++|.+.+.+++++||++     +++++ +.++
T Consensus       128 -----~~~~aAl~pc~~~Y~~ig~~l~~~-----~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~-~~~~  191 (214)
T 2qzc_A          128 -----NKFLVAWTPCMFGYSIVGDYVIDS-----PNEVYKTWASFYASTEYKKRIEAILYALDEV-----SITED-LLNI  191 (214)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHTTC-----SCHHHHHHHHHHHSHHHHHHHHHHHHHHTTS-----CCCHH-HHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHHhC-----CCChHHHHHHHhCCHHHHHHHHHHHHHHHhC-----ccHHH-HHHH
Confidence                 789999999999999999998753     4589999999999999999999999999998     35777 9999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCcc
Q 010855          164 YYKAIKLHVNFFAAQPVKQQTT  185 (499)
Q Consensus       164 F~~a~~lE~~Fw~~a~~~~~~~  185 (499)
                      |.++|+||++|||+++..++|+
T Consensus       192 f~~a~~~E~~Fwd~a~~~~~~~  213 (214)
T 2qzc_A          192 FINSVRFEIGFWDASLRKDPTV  213 (214)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999887765

>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3

Probab=99.95  E-value=1.2e-28  Score=238.23  Aligned_cols=149  Identities=18%  Similarity=0.342  Sum_probs=132.7

Q ss_pred             cCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKR-VKQKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~-i~~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++|| |.+++..+...+.. +.+|+++|+.+++.||++.++  +.+++|+|.+||+||++++ +|++             
T Consensus        61 ~~ka-~~~~~~~l~~~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~~-------------  126 (226)
T 1udd_A           61 SSKA-EYPLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGNI-------------  126 (226)
T ss_dssp             HHHS-CTTHHHHHHHHHHHHTTHHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSCH-------------
T ss_pred             HHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHHhcCCH-------------
Confidence            6788 88889999998887 558999999999999999764  6789999999999999998 5775             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCH-HHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTG-EELEVIK  161 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~-~e~~~~~  161 (499)
                            +++++||+||+|+|.+||+++.+..... ++++|++||++|+|++|.+.+.+++++||++     + +++++|.
T Consensus       127 ------~~~laAl~pc~~~Y~~ig~~l~~~~~~~-~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~~~~~  194 (226)
T 1udd_A          127 ------IEGLTALLPCFWSYAEIAEYHKDKLRDN-PIKIYREWGKVYLSNEYLNLVGRLRKIIDSS-----GHSGYDRLR  194 (226)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHTHHHHTTC-SCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS-----CSSCHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHhccCCC-CCchHHHHHHHhCCHHHHHHHHHHHHHHHhC-----chhHHHHHH
Confidence                  6899999999999999999987653222 4699999999999999999999999999998     3 5778999


Q ss_pred             HHHHHHHHHHHHhcCCCCCC
Q 010855          162 KLYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       162 ~~F~~a~~lE~~Fw~~a~~~  181 (499)
                      ++|.++|+||++|||++|..
T Consensus       195 ~~f~~a~~lE~~Fwd~a~~~  214 (226)
T 1udd_A          195 RIFITGSKFELAFWEMAWRG  214 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhcc
Confidence            99999999999999999874

>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A

Probab=99.94  E-value=9.7e-27  Score=229.01  Aligned_cols=144  Identities=16%  Similarity=0.284  Sum_probs=129.4

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHh-cCCcccccccccccchhhhh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPFEKI   85 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~~~~   85 (499)
                      ++||+| +++..+...+..+.+  ++|+.++++||++.++-.+++|+|.+||+||++++ +|++                
T Consensus       106 ~aka~~-~~~~~~~~~~~~~~~--~lh~~~~~~~Gi~~~~~~~~~pat~aYt~~ll~~a~~g~~----------------  166 (258)
T 2a2m_A          106 ATCAQD-ETLREFFKAKAKSYD--EYNETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLAS----------------  166 (258)
T ss_dssp             HHTCSS-HHHHHHHHHHHHHHH--HHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHHHHSCT----------------
T ss_pred             HHhCCc-HHHHHHHHHHHHHHH--HHHHHHHHHcCCCHHHccCCCHHHHHHHHHHHHHHhcCCH----------------
Confidence            789999 889999888888776  99999999999997654678999999999999999 5776                


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhccccc-ccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 010855           86 KVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWID-YYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLY  164 (499)
Q Consensus        86 ~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~-~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~F  164 (499)
                         +++++||+||+|+|.+||+++.+...   ++++|++||+ +|+|+   +.|.+++++||+++...+   +++|+++|
T Consensus       167 ---~~~laAl~pC~~~Y~eig~~l~~~~~---~~~~Y~~WI~~~Y~~~---~~v~~~~~lld~~~~~~~---~~~l~~~F  234 (258)
T 2a2m_A          167 ---PYMCVVMLPCEYLWPWIANFLDGYTP---TNSLYRFWIEWNGGTP---NGAYQMGNMLEQYRDKID---EDKAVEIF  234 (258)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGSC---TTSTTHHHHHHHCSCC---HHHHHHHHHHHTTGGGSC---HHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHhccC---CCchHHHHHHhccCCH---HHHHHHHHHHHHHHhhcc---HHHHHHHH
Confidence               68999999999999999999987533   4599999999 99999   899999999999987766   67899999


Q ss_pred             HHHHHHHHHhcCCCCCC
Q 010855          165 YKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       165 ~~a~~lE~~Fw~~a~~~  181 (499)
                      .++|+||++||+++|..
T Consensus       235 ~~a~~lE~~Fwd~a~~~  251 (258)
T 2a2m_A          235 NTAMNYELKVFTSSTIL  251 (258)
T ss_dssp             HHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHhhhh
Confidence            99999999999999864

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.87  E-value=2.6e-22  Score=200.99  Aligned_cols=205  Identities=16%  Similarity=0.260  Sum_probs=149.4

Q ss_pred             CceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhhc
Q 010855          197 GHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAE  276 (499)
Q Consensus       197 ~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~  276 (499)
                      ++++||||||||||..|..+....                     +++...+.+..+.+.+......+.++|.|.+....
T Consensus        42 ~kL~VV~DfdgTLT~~~~~g~~~~---------------------s~~~i~e~~~~~~~~~~~~~~~l~~~y~~~e~~~~  100 (297)
T 4fe3_A           42 AKLQIITDFNMTLSRFSYNGKRCP---------------------TCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPV  100 (297)
T ss_dssp             HHEEEEECCTTTTBCSEETTEECC---------------------CHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             hhEEEEEcCCCCceeeccCCeEee---------------------chHHHHHhhhhcCHHHHHHHHHHHHhhcccccccc
Confidence            578999999999998774211000                     01111222233344555566666667777766555


Q ss_pred             CCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChH
Q 010855          277 FEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQ--HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGD  354 (499)
Q Consensus       277 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~  354 (499)
                      .+.++.   .+.|.+|+.+.++.+.+.    |++.+.+.+.++  ++++|||+.++++.|+++|   ++++|+|+|+ .+
T Consensus       101 ~~~~ek---~~~~~~~~~~~~e~l~~~----gl~~~~~~~~v~~~~i~l~~g~~e~i~~l~~~g---i~v~ivSgg~-~~  169 (297)
T 4fe3_A          101 LTVEEK---FPYMVEWYTKSHGLLIEQ----GIPKAKLKEIVADSDVMLKEGYENFFGKLQQHG---IPVFIFSAGI-GD  169 (297)
T ss_dssp             SCHHHH---HHHHHHHHHHHHHHHHHT----TCBGGGHHHHHHTSCCCBCBTHHHHHHHHHHTT---CCEEEEEEEE-HH
T ss_pred             ccHHHh---hhhhHHhhhhhHHHHhhc----CccHHHHHHHHHhcCCCCCCcHHHHHHHHHHcC---CeEEEEeCCc-HH
Confidence            566654   457889999999998876    457777777765  6899999999999999999   9999999998 78


Q ss_pred             HHHHHHHcCCC--CceEEEeeceEeeCCeeeccccccCCChhhhHHH------HHHHHhhcCCCCCceEEEEcCCcccHH
Q 010855          355 LIRSAFASGDL--NAFRVHSNELVYEESISTGEIVNKLESPLEKLQA------FNDILKDHSNDEQNLTVYIGGSPGDLL  426 (499)
Q Consensus       355 ~I~~~L~~~gl--~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~------l~~~~~~~~~~~~~~vIyiGDs~tDl~  426 (499)
                      +|++++++.|+  .+..|+||.+.++++..++.+..+.....+|..-      +.++..     .+.+++++|||.||++
T Consensus       170 ~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~k~~~~~~~~~-----~~~~v~~vGDGiNDa~  244 (297)
T 4fe3_A          170 VLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLK-----DNSNIILLGDSQGDLR  244 (297)
T ss_dssp             HHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTCHHHHHHTT-----TCCEEEEEESSGGGGG
T ss_pred             HHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHHHHHHHHHhhc-----cCCEEEEEeCcHHHHH
Confidence            99999999886  3578999999998877777676665555555433      223322     2468999999999999


Q ss_pred             HHH---hcCccEEEc
Q 010855          427 CLL---EADIGIVIG  438 (499)
Q Consensus       427 ~l~---~Adigiv~~  438 (499)
                      |++   .||+||.++
T Consensus       245 m~k~l~~advgiaiG  259 (297)
T 4fe3_A          245 MADGVANVEHILKIG  259 (297)
T ss_dssp             TTTTCSCCSEEEEEE
T ss_pred             HHhCccccCeEEEEE
Confidence            955   899999887

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.86  E-value=2.8e-20  Score=177.38  Aligned_cols=148  Identities=13%  Similarity=0.100  Sum_probs=128.6

Q ss_pred             hccCCCHHHHHHHhhc-----C--CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEe
Q 010855          305 VLKGLNLEDIKWASQH-----L--IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVY  377 (499)
Q Consensus       305 ~f~Gi~~~~l~~~~~~-----i--~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~  377 (499)
                      .+.|++.+++.+..+.     +  .+.||+.++++.++++|   ++++|+|++. ..+++.+++..|+  .++++|.+.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~~~~~~~~~g~--~~~~~~~~~~  141 (232)
T 3fvv_A           68 LLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAG---DLCALVTATN-SFVTAPIARAFGV--QHLIATDPEY  141 (232)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHTTGGGCCHHHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTC--CEEEECEEEE
T ss_pred             HhcCCCHHHHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCC--CEEEEcceEE
Confidence            4557788877766542     2  68999999999999999   9999999996 7899999999876  4799999999


Q ss_pred             eCCeeeccccccCCChhhhHHHHHHHHhhcC---CCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhhhhCCcc
Q 010855          378 EESISTGEIVNKLESPLEKLQAFNDILKDHS---NDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSF  454 (499)
Q Consensus       378 ~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~---~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~  454 (499)
                      .+|+++|.+.+..+.+.+|...+++++...+   .+ +.++++||||.+|++|+..|++++++.+++.|.+.|++.||++
T Consensus       142 ~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~-~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~~~a~~~~w~~  220 (232)
T 3fvv_A          142 RDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGD-FAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQV  220 (232)
T ss_dssp             ETTEEEEEEESSCSSTHHHHHHHHHHHHHTTCCGGG-SSEEEEEECCGGGHHHHHHSSEEEEESCCHHHHHHHHHHTCEE
T ss_pred             ECCEEeeeecCCCCcchHHHHHHHHHHHHcCCCcCc-hhheEEEeCCHhhHHHHHhCCCeEEECcCHHHHHHHHHCCCcE
Confidence            9999999988778888999999999887765   42 5789999999999999999999999998999999999999999


Q ss_pred             ccccc
Q 010855          455 VPLFS  459 (499)
Q Consensus       455 ~p~~~  459 (499)
                      +++..
T Consensus       221 ~~~~~  225 (232)
T 3fvv_A          221 IDLFD  225 (232)
T ss_dssp             ECCC-
T ss_pred             eehhh
Confidence            99964

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.78  E-value=2.3e-18  Score=180.41  Aligned_cols=192  Identities=20%  Similarity=0.205  Sum_probs=152.5

Q ss_pred             CCceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhh
Q 010855          196 EGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVA  275 (499)
Q Consensus       196 ~~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~  275 (499)
                      +++.+|+|||||||+..+++..+++...                      ....+..+...++.+.              
T Consensus       183 ~~~k~viFD~DgTLi~~~~~~~la~~~g----------------------~~~~~~~~~~~~~~g~--------------  226 (415)
T 3p96_A          183 RAKRLIVFDVDSTLVQGEVIEMLAAKAG----------------------AEGQVAAITDAAMRGE--------------  226 (415)
T ss_dssp             TCCCEEEECTBTTTBSSCHHHHHHHHTT----------------------CHHHHHHHHHHHHTTC--------------
T ss_pred             cCCcEEEEcCcccCcCCchHHHHHHHcC----------------------CcHHHHHHHHHHhcCC--------------
Confidence            4566999999999999998877776421                      2233443433332210              


Q ss_pred             cCCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHH
Q 010855          276 EFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDL  355 (499)
Q Consensus       276 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~  355 (499)
                       .++             +.....++   ..++|++.+.+.+..+.+.++||+.++++.++++|   +++.|+|+|+ ..+
T Consensus       227 -~~~-------------~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~pg~~e~l~~Lk~~G---~~~~ivS~~~-~~~  285 (415)
T 3p96_A          227 -LDF-------------AQSLQQRV---ATLAGLPATVIDEVAGQLELMPGARTTLRTLRRLG---YACGVVSGGF-RRI  285 (415)
T ss_dssp             -SCH-------------HHHHHHHH---HTTTTCBTHHHHHHHHHCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHH
T ss_pred             -cCH-------------HHHHHHHH---HHhcCCCHHHHHHHHHhCccCccHHHHHHHHHHCC---CEEEEEcCCc-HHH
Confidence             112             11222233   46789999999998889999999999999999999   9999999997 779


Q ss_pred             HHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          356 IRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       356 I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ++.+++..|+  ..+++|.+.+.+|++||.+.+.++.+..|...++.+++..+.+ ..++++||||.+|++|++.||+|+
T Consensus       286 ~~~~~~~lgl--~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~-~~~~i~vGD~~~Di~~a~~aG~~v  362 (415)
T 3p96_A          286 IEPLAEELML--DYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVP-MAQTVAVGDGANDIDMLAAAGLGI  362 (415)
T ss_dssp             HHHHHHHTTC--SEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHHHHcCc--cceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcC-hhhEEEEECCHHHHHHHHHCCCeE
Confidence            9999998876  5889999999999999998888888999999999999887763 578999999999999999999999


Q ss_pred             EEcCCchHHhhh
Q 010855          436 VIGSSSSLRRLG  447 (499)
Q Consensus       436 v~~~~~~L~~~~  447 (499)
                      ++.+++.+.+.+
T Consensus       363 a~~~~~~~~~~a  374 (415)
T 3p96_A          363 AFNAKPALREVA  374 (415)
T ss_dssp             EESCCHHHHHHC
T ss_pred             EECCCHHHHHhC
Confidence            997777666544

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.77  E-value=7.1e-18  Score=170.78  Aligned_cols=191  Identities=16%  Similarity=0.140  Sum_probs=149.0

Q ss_pred             CCceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhh
Q 010855          196 EGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVA  275 (499)
Q Consensus       196 ~~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~  275 (499)
                      +++.+|+|||||||+..++...+++...                      ....|..+...++.+.              
T Consensus       106 ~~~kaviFDlDGTLid~~~~~~la~~~g----------------------~~~~~~~~~~~~~~g~--------------  149 (317)
T 4eze_A          106 PANGIIAFDMDSTFIAEEGVDEIARELG----------------------MSTQITAITQQAMEGK--------------  149 (317)
T ss_dssp             CCSCEEEECTBTTTBSSCHHHHHHHHTT----------------------CHHHHHHHHHHHHTTS--------------
T ss_pred             CCCCEEEEcCCCCccCCccHHHHHHHhC----------------------CcHHHHHHHHHHhcCC--------------
Confidence            4566999999999999998877665321                      2233443433332211              


Q ss_pred             cCCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHH
Q 010855          276 EFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDL  355 (499)
Q Consensus       276 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~  355 (499)
                       .++.             .....++   ..++|.+.+.+.+..+.+.+.||+.++++.++++|   ++++|||++. ..+
T Consensus       150 -~~~~-------------~~l~~~~---~~l~~~~~~~i~~~~~~~~l~pg~~e~L~~Lk~~G---~~v~IvSn~~-~~~  208 (317)
T 4eze_A          150 -LDFN-------------ASFTRRI---GMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAKG---FKTAIISGGL-DIF  208 (317)
T ss_dssp             -SCHH-------------HHHHHHH---HTTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHH
T ss_pred             -CCHH-------------HHHHHHH---HHhcCCCHHHHHHHHhCCEECcCHHHHHHHHHhCC---CEEEEEeCcc-HHH
Confidence             1111             1111223   45678899999998899999999999999999999   9999999996 789


Q ss_pred             HHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          356 IRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       356 I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ++.+++..|+  ..+++|.+.+++|.++|.+.+.+..+..|...++.+++..+.+ +.++++||||.+|++|++.||+|+
T Consensus       209 ~~~~l~~lgl--~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~-~~~~i~VGDs~~Di~aa~~AG~~v  285 (317)
T 4eze_A          209 TQRLKARYQL--DYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIA-TENIIACGDGANDLPMLEHAGTGI  285 (317)
T ss_dssp             HHHHHHHHTC--SEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHHHHcCC--CeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHCCCeE
Confidence            9999998776  5789999999999999998888888889999999998877663 578999999999999999999999


Q ss_pred             EEcCCchHHhh
Q 010855          436 VIGSSSSLRRL  446 (499)
Q Consensus       436 v~~~~~~L~~~  446 (499)
                      ++.+++.+.+.
T Consensus       286 a~~~~~~~~~~  296 (317)
T 4eze_A          286 AWKAKPVVREK  296 (317)
T ss_dssp             EESCCHHHHHH
T ss_pred             EeCCCHHHHHh
Confidence            99766666543

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=99.74  E-value=1e-16  Score=166.27  Aligned_cols=130  Identities=18%  Similarity=0.224  Sum_probs=107.6

Q ss_pred             hhccCCCHHHHHHHhhc----------------------------------CCCChhHHHHHHHHHHcCCCcccEEEEec
Q 010855          304 GVLKGLNLEDIKWASQH----------------------------------LIFQDGCRRFFQNTIKSTNFKTDVHVLSY  349 (499)
Q Consensus       304 ~~f~Gi~~~~l~~~~~~----------------------------------i~lr~G~~efl~~l~~~g~~~~~~~IVS~  349 (499)
                      .+|.|++.+++++.++.                                  ++++||+.++++.|+++|   ++++|||+
T Consensus       169 ~l~~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G---~~v~IVSg  245 (385)
T 4gxt_A          169 FLLKNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENG---IDCYIVSA  245 (385)
T ss_dssp             GGGTTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred             HHHcCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCC---CeEEEEcC
Confidence            58999999999998641                                  137999999999999999   99999999


Q ss_pred             cCChHHHHHHHHcCC----CCceEEEeeceEee-CCeeeccccc--cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCc
Q 010855          350 CWCGDLIRSAFASGD----LNAFRVHSNELVYE-ESISTGEIVN--KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSP  422 (499)
Q Consensus       350 g~s~~~I~~~L~~~g----l~~~~I~aN~l~~~-~g~~tG~~~~--~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~  422 (499)
                      |. .++++++.+..|    ++..+|++|++.++ +|.+||++.+  +++.+..|...+++++... . .+..++++|||.
T Consensus       246 g~-~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~~-~-~~~~i~a~GDs~  322 (385)
T 4gxt_A          246 SF-IDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKND-R-NYGPIMVGGDSD  322 (385)
T ss_dssp             EE-HHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCCT-T-EECCSEEEECSG
T ss_pred             Cc-HHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHhc-C-CCCcEEEEECCH
Confidence            98 889999998864    45688999999996 6899998874  5678889999999987542 1 235689999999


Q ss_pred             ccHHHHHhc---CccEEEcC
Q 010855          423 GDLLCLLEA---DIGIVIGS  439 (499)
Q Consensus       423 tDl~~l~~A---digiv~~~  439 (499)
                      ||++||...   .+|++|.+
T Consensus       323 ~D~~ML~~~~~~~~~liinr  342 (385)
T 4gxt_A          323 GDFAMLKEFDHTDLSLIIHR  342 (385)
T ss_dssp             GGHHHHHHCTTCSEEEEECC
T ss_pred             hHHHHHhcCccCceEEEEcC
Confidence            999999963   34677765

>3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV}

Probab=99.74  E-value=9.8e-19  Score=171.27  Aligned_cols=149  Identities=9%  Similarity=0.079  Sum_probs=120.3

Q ss_pred             cCCCCC-----H-HHHHHHHHHHHHHHHHH---HHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccc
Q 010855            7 PSLSHD-----E-EDKLAIRKLRKRVKQKL---KTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKV   74 (499)
Q Consensus         7 ~~~a~d-----~-~~~~~~~~~~~~i~~E~---~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~   74 (499)
                      ++|+++     + +.+.++   ...+..|+   ++|+.+++.|||+.++  +.+++|+|.+||+||++++ .|++     
T Consensus        77 ~aKa~~~~~~~~~~~~~~l---~~~i~vE~~H~~~~~~f~~~~Gis~eel~~~~~~P~~~aYt~~ml~~a~~g~l-----  148 (262)
T 3oql_A           77 LTKTRFGRHPGEDMARRWL---MRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDSL-----  148 (262)
T ss_dssp             HTTCCTTSCHHHHHHHHHH---HHHHHHTTTHHHHHHHHHHTTTCCHHHHHHTCSCGGGGHHHHHHHHHHHHSCH-----
T ss_pred             HHhCccccCCChHHHHHHH---HHHHHHHHhhHHHHHHHHHHcCCCHHHHhcCCCChHHHHHHHHHHHHHccCCH-----
Confidence            566764     2 344444   45555565   2334789999999875  6789999999999999998 6885     


Q ss_pred             cccccchhhhhhhHHHHHHHHHHHHHHHHHHHH---------HHHhhcCCCCCcchhcccccccCChhHHHH-HHHHHHH
Q 010855           75 LGKIETPFEKIKVAAYTLSAISPCMRLFEVIAK---------EIQALLNPDDGSHLYKKWIDYYCSQSFQES-ALQTEEL  144 (499)
Q Consensus        75 ~~~~~~~~~~~~~~~~~l~Al~PC~~~Y~~ig~---------~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~-~~~~~~~  144 (499)
                                    +++++|++  +|+|.+||+         .+.+..+.. .++.|.+||+.|+  +|... +.+..++
T Consensus       149 --------------~e~lAAl~--ya~e~~ig~~s~~~~~g~~~~~~~~~~-~~~~~~~w~~~h~--~~D~~H~~e~~~l  209 (262)
T 3oql_A          149 --------------AVAMAATN--YAIEGATGEWSAVVCSTGVYAEAFAEE-TRKKSMKWLKMHA--QYDDAHPWEALEI  209 (262)
T ss_dssp             --------------HHHHHHTT--THHHHHHHHHHHHHHSSSHHHHTSCHH-HHHHHHHHHHHHH--TCC-CHHHHHHHH
T ss_pred             --------------HHHHHHHH--HHHHHHhhhHHHHhhhhHHHhcCCCcc-cChHHHHHHHHHH--HHHHHhHHHHHHH
Confidence                          68999999  999999999         666533211 2678999999998  78888 9999999


Q ss_pred             HHHHhccC-CHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 010855          145 LDKLSVLL-TGEELEVIKKLYYKAIKLHVNFFAAQPVKQ  182 (499)
Q Consensus       145 ld~l~~~~-~~~e~~~~~~~F~~a~~lE~~Fw~~a~~~~  182 (499)
                      +|+++.+. +++++++|+++|.+|+++|+.|||+||..+
T Consensus       210 i~~l~~~~~~~~e~~~~~~a~~~S~~~~~~fld~~y~~e  248 (262)
T 3oql_A          210 ICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLERCIQLD  248 (262)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999888 899999999999999999999999999875

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.72  E-value=3.5e-17  Score=153.65  Aligned_cols=136  Identities=17%  Similarity=0.125  Sum_probs=117.0

Q ss_pred             hhccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeee
Q 010855          304 GVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESIST  383 (499)
Q Consensus       304 ~~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~t  383 (499)
                      ..+.|.+.+++.+..+.+.+.||+.++++.++++|   +++.|+|.+. ..+++.+++..|+  ..++++.+..+++..+
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~gl--~~~f~~~~~~~~~~~~  130 (217)
T 3m1y_A           57 SKLKNMPLKLAKEVCESLPLFEGALELVSALKEKN---YKVVCFSGGF-DLATNHYRDLLHL--DAAFSNTLIVENDALN  130 (217)
T ss_dssp             HTTTTCBHHHHHHHHTTCCBCBTHHHHHHHHHTTT---EEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEE
T ss_pred             HHhcCCCHHHHHHHHhcCcCCCCHHHHHHHHHHCC---CEEEEEcCCc-hhHHHHHHHHcCc--chhccceeEEeCCEEE
Confidence            45678899999999888999999999999999999   9999999985 7788999988775  4567888888888888


Q ss_pred             ccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhh
Q 010855          384 GEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRL  446 (499)
Q Consensus       384 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~  446 (499)
                      |.+.+..+.+..|...++.+++..+.+ +.++++||||.+|++|++.||+++++.+.+.+.+.
T Consensus       131 ~~~~~~~~~~k~k~~~~~~~~~~~g~~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~  192 (217)
T 3m1y_A          131 GLVTGHMMFSHSKGEMLLVLQRLLNIS-KTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQH  192 (217)
T ss_dssp             EEEEESCCSTTHHHHHHHHHHHHHTCC-STTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTT
T ss_pred             eeeccCCCCCCChHHHHHHHHHHcCCC-HhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHh
Confidence            888777778889999999998877664 57899999999999999999999999666666543

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.68  E-value=3.1e-16  Score=159.26  Aligned_cols=136  Identities=15%  Similarity=0.101  Sum_probs=117.8

Q ss_pred             hhccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeee
Q 010855          304 GVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESIST  383 (499)
Q Consensus       304 ~~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~t  383 (499)
                      ..+++.+.+.+..+.+.++++||+.++++.++++|   +++.|+|++. ..+++.+++..|+  ..+++|.+.+.++.++
T Consensus       160 ~~l~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~~~~~~~~lgl--~~~~~~~l~~~d~~~t  233 (335)
T 3n28_A          160 SKLKDAPEQILSQVRETLPLMPELPELVATLHAFG---WKVAIASGGF-TYFSDYLKEQLSL--DYAQSNTLEIVSGKLT  233 (335)
T ss_dssp             HTTTTCBTTHHHHHHTTCCCCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEE
T ss_pred             HHhcCCCHHHHHHHHHhCCcCcCHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHcCC--CeEEeeeeEeeCCeee
Confidence            34677787888888888999999999999999999   9999999996 7788999888776  5789999999999999


Q ss_pred             ccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhh
Q 010855          384 GEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRL  446 (499)
Q Consensus       384 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~  446 (499)
                      |.+.+.+..+..|...++.+++..+.+ ..++++||||.||++|++.||+||++.+++.+.+.
T Consensus       234 g~~~~~~~~~kpk~~~~~~~~~~lgi~-~~~~v~vGDs~nDi~~a~~aG~~va~~~~~~~~~~  295 (335)
T 3n28_A          234 GQVLGEVVSAQTKADILLTLAQQYDVE-IHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAK  295 (335)
T ss_dssp             EEEESCCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHTT
T ss_pred             eeecccccChhhhHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHhh
Confidence            988888888889999999999887764 57899999999999999999999999666666543

>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4

Probab=99.63  E-value=7.9e-16  Score=148.32  Aligned_cols=146  Identities=12%  Similarity=0.054  Sum_probs=113.8

Q ss_pred             cCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCccccccccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRV----KQKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIE   79 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i----~~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~   79 (499)
                      +++++|.+.+..+...+...    ..|+++|..+++.+|++.++  ..++.|+|.+|++||++++ .|++          
T Consensus        62 ~~~~~~~~~~~~~~~~i~~e~~~~~~h~~l~~~~~~~~Gi~~~~~~~~~~~p~t~~y~~~~~~~~~~~~~----------  131 (231)
T 1rcw_A           62 HSRCDDLEARKLLLDNLMDEENGYPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWCTGDSL----------  131 (231)
T ss_dssp             HTTCCCHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHTSSCH----------
T ss_pred             HhcCCCHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHHcCCCH----------
Confidence            57999999888776654444    24699999999999999764  5678999999999999998 5775          


Q ss_pred             chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhH-------HHHHHHHHHHHHHHhccC
Q 010855           80 TPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSF-------QESALQTEELLDKLSVLL  152 (499)
Q Consensus        80 ~~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f-------~~~~~~~~~~ld~l~~~~  152 (499)
                               +++++||+    +|..++..+......  ..++|..||+.|+++.|       .+-+.+..+++|+++.  
T Consensus       132 ---------~~~laal~----~~E~~~~~~~~~~~~--~~~~~~~wi~~~~~~~f~~h~~~d~~h~~~~~~~l~~~~~--  194 (231)
T 1rcw_A          132 ---------AAGVAALY----SYESQIPRIAREKIR--GLTEYFGFSNPEDYAYFTEHEEADVRHAREEKALIEMLLK--  194 (231)
T ss_dssp             ---------HHHHHHHH----HHHTTHHHHHHHHHH--HHHHHSCCCSGGGGHHHHHHHHHHHHHHHHHHHHHHHHCS--
T ss_pred             ---------HHHHHHHH----HHHHHHHHHHHHHHH--HHHHHCCCCChhhhHHHHHHHHHhHHHHHHHHHHHHHHHH--
Confidence                     57888854    455555444322110  22355689999999999       6788999999999985  


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 010855          153 TGEELEVIKKLYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       153 ~~~e~~~~~~~F~~a~~lE~~Fw~~a~~~  181 (499)
                        ++++++.++|.+++++|+.|||+++..
T Consensus       195 --~~~~~~~~~~~~~~~le~~fwd~~~~~  221 (231)
T 1rcw_A          195 --DDADKVLEASQEVTQSLYGFLDSFLDP  221 (231)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              477899999999999999999999875

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.62  E-value=1.9e-14  Score=133.66  Aligned_cols=132  Identities=18%  Similarity=0.187  Sum_probs=101.0

Q ss_pred             hccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeec
Q 010855          305 VLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTG  384 (499)
Q Consensus       305 ~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG  384 (499)
                      .+.|...++..+......+.||..++++.++++|   +++.|+|++. ...++..++..++  ..+++|.+...++..+|
T Consensus        59 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  132 (211)
T 1l7m_A           59 LLKDLPIEKVEKAIKRITPTEGAEETIKELKNRG---YVVAVVSGGF-DIAVNKIKEKLGL--DYAFANRLIVKDGKLTG  132 (211)
T ss_dssp             TTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---EEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEEE
T ss_pred             HhcCCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHcCC--CeEEEeeeEEECCEEcC
Confidence            3466666666666566788899999999999999   9999999885 5677777777665  34566666555555566


Q ss_pred             cccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchH
Q 010855          385 EIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSL  443 (499)
Q Consensus       385 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L  443 (499)
                      .+....+.+.+|...+.++++..+.+ ..++++||||.||++|++.|++++++++.+.+
T Consensus       133 ~~~~~~~~~~~K~~~l~~~~~~lgi~-~~~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~  190 (211)
T 1l7m_A          133 DVEGEVLKENAKGEILEKIAKIEGIN-LEDTVAVGDGANDISMFKKAGLKIAFCAKPIL  190 (211)
T ss_dssp             EEECSSCSTTHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEEESCCHHH
T ss_pred             CcccCccCCccHHHHHHHHHHHcCCC-HHHEEEEecChhHHHHHHHCCCEEEECCCHHH
Confidence            55444445668999999988877663 57899999999999999999999998865444

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.59  E-value=1.3e-14  Score=133.60  Aligned_cols=119  Identities=13%  Similarity=0.213  Sum_probs=95.8

Q ss_pred             hhccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeee
Q 010855          304 GVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESIST  383 (499)
Q Consensus       304 ~~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~t  383 (499)
                      ..+.|.+.+.+.+..+.+.++||+.++++.++++|   +++.|+|++. ...++.+ +..|+  ..+ .+.+.+.++..+
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~-~~~~~--~~~-~~~~~~~~~~~~  132 (201)
T 4ap9_A           61 GLIRGIDEGTFLRTREKVNVSPEARELVETLREKG---FKVVLISGSF-EEVLEPF-KELGD--EFM-ANRAIFEDGKFQ  132 (201)
T ss_dssp             HHTTTCBHHHHHHGGGGCCCCHHHHHHHHHHHHTT---CEEEEEEEEE-TTTSGGG-TTTSS--EEE-EEEEEEETTEEE
T ss_pred             HHhcCCCHHHHHHHHHhCCCChhHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHH-HHcCc--hhh-eeeEEeeCCceE
Confidence            35678899999998889999999999999999999   9999999985 5567777 66654  344 777776677766


Q ss_pred             ccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          384 GEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       384 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                      |    +.+.+..|...++++ .      ..++++||||.+|++|++.|+++|++++..
T Consensus       133 ~----~~~~~~~k~~~l~~l-~------~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~  179 (201)
T 4ap9_A          133 G----IRLRFRDKGEFLKRF-R------DGFILAMGDGYADAKMFERADMGIAVGREI  179 (201)
T ss_dssp             E----EECCSSCHHHHHGGG-T------TSCEEEEECTTCCHHHHHHCSEEEEESSCC
T ss_pred             C----CcCCccCHHHHHHhc-C------cCcEEEEeCCHHHHHHHHhCCceEEECCCC
Confidence            6    223445688888877 1      468999999999999999999999998764

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.56  E-value=8.5e-14  Score=133.65  Aligned_cols=115  Identities=13%  Similarity=0.125  Sum_probs=89.6

Q ss_pred             HHHHHHH-hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCC-CceEEEeeceEeeCCeeeccccc
Q 010855          311 LEDIKWA-SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDL-NAFRVHSNELVYEESISTGEIVN  388 (499)
Q Consensus       311 ~~~l~~~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl-~~~~I~aN~l~~~~g~~tG~~~~  388 (499)
                      .+++.++ ...+.+.||+.++++.|+++|   ++++|+|++. ..+++.+++  ++ +...|+|++....++.+++.+..
T Consensus        65 ~~~~~~~~~~~~~~~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~k  138 (236)
T 2fea_A           65 KEEITSFVLEDAKIREGFREFVAFINEHE---IPFYVISGGM-DFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPH  138 (236)
T ss_dssp             HHHHHHHHHHHCCBCTTHHHHHHHHHHHT---CCEEEEEEEE-HHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTT
T ss_pred             HHHHHHHHhcCCCCCccHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCC
Confidence            3444444 456899999999999999999   9999999996 778888887  54 34679999888777766665432


Q ss_pred             ---c-CC--ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          389 ---K-LE--SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       389 ---~-~~--~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                         . +.  ++.+|..+++++..     .+.+++|||||.+|+.+++.||+.++
T Consensus       139 p~p~~~~~~~~~~K~~~~~~~~~-----~~~~~~~vGDs~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          139 SCKGTCSNQCGCCKPSVIHELSE-----PNQYIIMIGDSVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             CCCTTCCSCCSSCHHHHHHHHCC-----TTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             CCccccccccCCcHHHHHHHHhc-----cCCeEEEEeCChHHHHHHHhCCeeee
Confidence               2 12  57899999887642     24689999999999999999997665

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=99.46  E-value=1.1e-12  Score=133.03  Aligned_cols=134  Identities=14%  Similarity=0.143  Sum_probs=104.3

Q ss_pred             hhccCCCHHHHHHHhhc-------------------------CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHH
Q 010855          304 GVLKGLNLEDIKWASQH-------------------------LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRS  358 (499)
Q Consensus       304 ~~f~Gi~~~~l~~~~~~-------------------------i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~  358 (499)
                      .+|+|++.+++++.++.                         ..+.|++.++++.|+++|   ++++|||++. .+++++
T Consensus       100 ~~~aGmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G---~~v~ivSas~-~~~v~~  175 (327)
T 4as2_A          100 QVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENG---IEVYVISAAH-EELVRM  175 (327)
T ss_dssp             HTTTTSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTT---CEEEEEEEEE-HHHHHH
T ss_pred             HHHcCCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHHH
Confidence            58999999999988752                         158999999999999999   9999999996 789998


Q ss_pred             HHHc----CCCCceEEEeeceEeeCCe---------------e----------eccccccCCChhhhHHHHHHHHhhcCC
Q 010855          359 AFAS----GDLNAFRVHSNELVYEESI---------------S----------TGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       359 ~L~~----~gl~~~~I~aN~l~~~~g~---------------~----------tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      +.+.    .|++..+|++.++..+++.               +          ++.+..+.+.+.+|...+++++..   
T Consensus       176 ~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~---  252 (327)
T 4as2_A          176 VAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDR---  252 (327)
T ss_dssp             HHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS---
T ss_pred             HHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHhh---
Confidence            8875    5788899999998876431               1          223334567789999999998843   


Q ss_pred             CCCceEEEEcCC-cccHHHHHhc----CccEEEcCCchHHh
Q 010855          410 DEQNLTVYIGGS-PGDLLCLLEA----DIGIVIGSSSSLRR  445 (499)
Q Consensus       410 ~~~~~vIyiGDs-~tDl~~l~~A----digiv~~~~~~L~~  445 (499)
                       .+..++++||| -+|++||..+    ++++++..+.+.++
T Consensus       253 -g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~~~~e  292 (327)
T 4as2_A          253 -WKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYME  292 (327)
T ss_dssp             -SCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCHHHHH
T ss_pred             -CCCCeEEecCCCCCCHHHHhccccCCCeEEEEecCCchHH
Confidence             13457899999 5999999763    35667777655544

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.44  E-value=1.7e-12  Score=122.83  Aligned_cols=123  Identities=15%  Similarity=0.123  Sum_probs=93.0

Q ss_pred             CHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEee-CCeeeccc
Q 010855          310 NLEDIKWASQ--HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYE-ESISTGEI  386 (499)
Q Consensus       310 ~~~~l~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~-~g~~tG~~  386 (499)
                      ..+.+.++..  ...+.||+.++++.++++|   +++.|+|++. ...++.+++..|+...+++++.+.++ ++.++|.-
T Consensus        72 ~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~  147 (225)
T 1nnl_A           72 SREQVQRLIAEQPPHLTPGIRELVSRLQERN---VQVFLISGGF-RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD  147 (225)
T ss_dssp             CHHHHHHHHHHSCCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC
T ss_pred             CHHHHHHHHHhccCCCCccHHHHHHHHHHCC---CcEEEEeCCh-HHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCC
Confidence            3444555543  4789999999999999999   9999999985 77899999998875446888887665 35555432


Q ss_pred             c-ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          387 V-NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       387 ~-~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      . ...+.+..|...++.++...+.   .++++||||.+|+.+++.||++|.++.
T Consensus       148 ~~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~vGDs~~Di~~a~~ag~~i~~~~  198 (225)
T 1nnl_A          148 ETQPTAESGGKGKVIKLLKEKFHF---KKIIMIGDGATDMEACPPADAFIGFGG  198 (225)
T ss_dssp             TTSGGGSTTHHHHHHHHHHHHHCC---SCEEEEESSHHHHTTTTTSSEEEEECS
T ss_pred             CCCcccCCCchHHHHHHHHHHcCC---CcEEEEeCcHHhHHHHHhCCeEEEecC
Confidence            2 2223345788888888776654   579999999999999999998666654

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.35  E-value=3.6e-12  Score=118.47  Aligned_cols=114  Identities=15%  Similarity=0.105  Sum_probs=84.4

Q ss_pred             CHHHHHHHhh---cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeC-Ceeecc
Q 010855          310 NLEDIKWASQ---HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEE-SISTGE  385 (499)
Q Consensus       310 ~~~~l~~~~~---~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~-g~~tG~  385 (499)
                      ..+.+.++.+   ...+.||+.++++.++++|   +++.|+|++. ..+++..++..|+....++++.+.+.. +.+++ 
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  141 (219)
T 3kd3_A           67 TKQSIKEFSNKYCPNLLTDGIKELVQDLKNKG---FEIWIFSGGL-SESIQPFADYLNIPRENIFAVETIWNSDGSFKE-  141 (219)
T ss_dssp             BHHHHHHHHHHHTTTTBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEE-
T ss_pred             CHHHHHHHHHhhccccCChhHHHHHHHHHHCC---CeEEEEcCCc-HHHHHHHHHHcCCCcccEEEeeeeecCCCceec-
Confidence            3455555543   3568999999999999999   9999999985 778999998888766678888888753 55554 


Q ss_pred             ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          386 IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       386 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      +.++.+....|.+.+.+...-    ...++++||||.||++|+. +++
T Consensus       142 ~~~~~~~~~~~~~~l~~~~~~----~~~~~~~vGD~~~Di~~~~-~G~  184 (219)
T 3kd3_A          142 LDNSNGACDSKLSAFDKAKGL----IDGEVIAIGDGYTDYQLYE-KGY  184 (219)
T ss_dssp             EECTTSTTTCHHHHHHHHGGG----CCSEEEEEESSHHHHHHHH-HTS
T ss_pred             cCCCCCCcccHHHHHHHHhCC----CCCCEEEEECCHhHHHHHh-CCC
Confidence            333444445577776665432    2478999999999999984 553

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.31  E-value=9.7e-11  Score=109.05  Aligned_cols=122  Identities=19%  Similarity=0.153  Sum_probs=90.6

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEee-CCeeeccc
Q 010855          308 GLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYE-ESISTGEI  386 (499)
Q Consensus       308 Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~-~g~~tG~~  386 (499)
                      |++.+++.+..+.+.+.||+.++++.++++    +++.|+|.+. ...++.+++..|+.  ..+++.+.+. ++..+|..
T Consensus        55 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----~~~~i~s~~~-~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~~~~~  127 (206)
T 1rku_A           55 GLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQ  127 (206)
T ss_dssp             TCCHHHHHHHHTTCCCCTTHHHHHHHHHTT----SEEEEEEEEE-HHHHHHHHHHTTCC--CEEEEEEEECTTSCEEEEE
T ss_pred             CCCHHHHHHHHHhcCCCccHHHHHHHHHhc----CcEEEEECCh-HHHHHHHHHHcCCc--ceecceeEEcCCceEEeee
Confidence            456677776667889999999999999864    5899999985 77899999988763  4555655553 33333322


Q ss_pred             cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          387 VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       387 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      .   ..+..|...++++...     +.++++||||.+|+.|++.||+++++.+.+.+.
T Consensus       128 ~---p~p~~~~~~l~~l~~~-----~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~  177 (206)
T 1rku_A          128 L---RQKDPKRQSVIAFKSL-----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVI  177 (206)
T ss_dssp             C---CSSSHHHHHHHHHHHT-----TCEEEEEECSSTTHHHHHHSSEEEEESCCHHHH
T ss_pred             c---CCCchHHHHHHHHHhc-----CCEEEEEeCChhhHHHHHhcCccEEECCcHHHH
Confidence            1   2235688888887542     368999999999999999999998886655554

>3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} SCOP: a.132.1.4 PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A*

Probab=99.23  E-value=2.5e-11  Score=118.54  Aligned_cols=146  Identities=9%  Similarity=-0.033  Sum_probs=113.6

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHhCCCCCC--CCC-CChhhHHHHHHHHHHh-cCCcccccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK------QKLKTLDSLVREWGFELPE--EII-TDDATVKCTDFLLSTA-SGKVEGEKVLG   76 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~------~E~~~h~~~~~~~g~~~~~--~~~-~~~~~~~Yt~~l~~~a-~~~~~~~~~~~   76 (499)
                      .+|++|.+.++.+.+.+....      .|+++|..+++.+|++.++  ..+ +.|+|+.|+++..+.+ .|++       
T Consensus        65 ~ak~~d~e~rr~l~~ni~~eeg~~~~~~hiel~~~fa~alGis~eel~~~~~~~P~t~~~vdaY~~~a~~~s~-------  137 (258)
T 3hlx_A           65 MANCPDAQTRRKWVQRILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRACW-------  137 (258)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHCSSSSCHHHHHHHHHHHHTTCCHHHHHTCCSCCHHHHHHHHHHHHHHHHSCH-------
T ss_pred             HHcCCCHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHHcCCCHHHHhhCCCCCcHHHHHHHHHHHHHhcCCH-------
Confidence            689999999998877765544      6789999999999999875  555 6999987777777767 5775       


Q ss_pred             cccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHH-------HHHHHHHh
Q 010855           77 KIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQT-------EELLDKLS  149 (499)
Q Consensus        77 ~~~~~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~-------~~~ld~l~  149 (499)
                                  +++++|+++|.+.=.....++.       +-+.|..||+.++-+.|..-+.+.       .+++-.. 
T Consensus       138 ------------~e~vAA~L~E~~~p~i~~~r~~-------~~~~~y~~i~~~~l~yF~~h~~~a~~D~~hal~~vl~~-  197 (258)
T 3hlx_A          138 ------------QEAACSSLTELFAPQIHQSRLD-------SWPQHYPWIKEEGYFFFRSRLSQANRDVEHGLALAKAY-  197 (258)
T ss_dssp             ------------HHHHHGGGGGGTHHHHHHHHHH-------HHHHHCTTSCGGGGHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHhh-------cHHHhCCCCChhHHHHHHHHhhcccccHHHHHHHHHHH-
Confidence                        6899999987755222222332       235678999999999998887665       5554222 


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010855          150 VLLTGEELEVIKKLYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       150 ~~~~~~e~~~~~~~F~~a~~lE~~Fw~~a~~  180 (499)
                       -.|+++++++.+++..+|.++|.|||+++.
T Consensus       198 -~~t~e~q~~a~~a~~~~~~~lw~~lDa~~~  227 (258)
T 3hlx_A          198 -CDSAEKQNRMLEILQFKLDILWSMLDAMTM  227 (258)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             348999999999999999999999998865

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.20  E-value=7.2e-10  Score=105.82  Aligned_cols=102  Identities=8%  Similarity=-0.117  Sum_probs=76.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ....+.||+.++++.+++ +   +++.|+|.+. ...++.+++..|+....+++           +...   ..+..|..
T Consensus       117 ~~~~~~~~~~~~l~~l~~-~---~~~~i~s~~~-~~~~~~~l~~~g~~f~~~~~-----------~~~~---~~~kp~~~  177 (254)
T 3umc_A          117 HRLRPWPDTLAGMHALKA-D---YWLAALSNGN-TALMLDVARHAGLPWDMLLC-----------ADLF---GHYKPDPQ  177 (254)
T ss_dssp             GSCEECTTHHHHHHHHTT-T---SEEEECCSSC-HHHHHHHHHHHTCCCSEECC-----------HHHH---TCCTTSHH
T ss_pred             hcCCCCccHHHHHHHHHh-c---CeEEEEeCCC-HHHHHHHHHHcCCCcceEEe-----------eccc---ccCCCCHH
Confidence            467889999999999987 4   7899999885 67888888877753222222           1111   12335777


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      .++.+++..+.+ +.++++|||+.+|+.|++.|++++++...
T Consensus       178 ~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~  218 (254)
T 3umc_A          178 VYLGACRLLDLP-PQEVMLCAAHNYDLKAARALGLKTAFIAR  218 (254)
T ss_dssp             HHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHcCCC-hHHEEEEcCchHhHHHHHHCCCeEEEEec
Confidence            888888777764 57899999999999999999998887764

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.19  E-value=4.2e-10  Score=105.67  Aligned_cols=102  Identities=13%  Similarity=0.078  Sum_probs=77.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   ++++|+|.+. ...++..++..|+..  ..+++           +..   ...+..|
T Consensus        88 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~-----------~~~---~~~~kp~  149 (233)
T 3s6j_A           88 HQIIALPGAVELLETLDKEN---LKWCIATSGG-IDTATINLKALKLDINKINIVT-----------RDD---VSYGKPD  149 (233)
T ss_dssp             GGCEECTTHHHHHHHHHHTT---CCEEEECSSC-HHHHHHHHHTTTCCTTSSCEEC-----------GGG---SSCCTTS
T ss_pred             ccCccCCCHHHHHHHHHHCC---CeEEEEeCCc-hhhHHHHHHhcchhhhhheeec-----------ccc---CCCCCCC
Confidence            45789999999999999999   9999999985 778899998877642  12222           111   1123346


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      ...++.+++..+.+ ..++++||||.+|+.|++.+|+ +|.+..
T Consensus       150 ~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~  192 (233)
T 3s6j_A          150 PDLFLAAAKKIGAP-IDECLVIGDAIWDMLAARRCKATGVGLLS  192 (233)
T ss_dssp             THHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEGG
T ss_pred             hHHHHHHHHHhCCC-HHHEEEEeCCHHhHHHHHHCCCEEEEEeC
Confidence            67788888777664 5789999999999999999998 445543

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.19  E-value=1.5e-09  Score=101.85  Aligned_cols=102  Identities=9%  Similarity=-0.030  Sum_probs=77.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  ..+++.           ..   ...+..|
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~---~~~~kp~  154 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAG---LKTAILSNGS-RHSIRQVVGNSGLTNSFDHLISV-----------DE---VRLFKPH  154 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHHTCGGGCSEEEEG-----------GG---TTCCTTC
T ss_pred             hcCCCCCCHHHHHHHHHhCC---CeEEEEeCCC-HHHHHHHHHHCCChhhcceeEeh-----------hh---cccCCCC
Confidence            46889999999999999999   9999999884 778888888776532  223222           11   1122335


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      ...++.+++..+.+ +.++++|||+.+|+.|++.+++++++..
T Consensus       155 ~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~  196 (230)
T 3um9_A          155 QKVYELAMDTLHLG-ESEILFVSCNSWDATGAKYFGYPVCWIN  196 (230)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred             hHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHCCCEEEEEe
Confidence            67777777776663 5789999999999999999999877654

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.17  E-value=2.1e-09  Score=101.23  Aligned_cols=102  Identities=9%  Similarity=-0.050  Sum_probs=76.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  ..+++.+              ....+.-|
T Consensus        96 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~  157 (233)
T 3umb_A           96 ACLSAFPENVPVLRQLREMG---LPLGILSNGN-PQMLEIAVKSAGMSGLFDHVLSVD--------------AVRLYKTA  157 (233)
T ss_dssp             HSCEECTTHHHHHHHHHTTT---CCEEEEESSC-HHHHHHHHHTTTCTTTCSEEEEGG--------------GTTCCTTS
T ss_pred             hcCCCCCCHHHHHHHHHhCC---CcEEEEeCCC-HHHHHHHHHHCCcHhhcCEEEEec--------------ccCCCCcC
Confidence            47889999999999999999   9999999884 778889998877642  2233221              11122234


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      ...++.+++..+.+ ..++++|||+.+|+.|++.+|+++++..
T Consensus       158 ~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~v~  199 (233)
T 3umb_A          158 PAAYALAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFWIN  199 (233)
T ss_dssp             HHHHTHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred             HHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence            56666666666653 5789999999999999999999877643

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.14  E-value=5.3e-09  Score=102.30  Aligned_cols=117  Identities=9%  Similarity=0.024  Sum_probs=84.4

Q ss_pred             CCCHHHHHHHhh-------cCCCChhHHHHHHHHHHcCCCcc--cEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceE
Q 010855          308 GLNLEDIKWASQ-------HLIFQDGCRRFFQNTIKSTNFKT--DVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELV  376 (499)
Q Consensus       308 Gi~~~~l~~~~~-------~i~lr~G~~efl~~l~~~g~~~~--~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~  376 (499)
                      |++.+++.+...       .+.+.||+.++++.++++|   +  ++.|+|.+. ...++..++..|+..  ..+++.+  
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g---~~~~l~i~Tn~~-~~~~~~~l~~~gl~~~fd~v~~~~--  194 (282)
T 3nuq_A          121 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSG---KIDKLWLFTNAY-KNHAIRCLRLLGIADLFDGLTYCD--  194 (282)
T ss_dssp             SSCHHHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSS---SCSEEEEECSSC-HHHHHHHHHHHTCTTSCSEEECCC--
T ss_pred             CCCHHHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCC---CCceEEEEECCC-hHHHHHHHHhCCcccccceEEEec--
Confidence            455555555432       3678999999999999999   9  999999985 678888888777632  2222211  


Q ss_pred             eeCCeeeccccccCCChhhhHHHHHHHHhhcCCCCC-ceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          377 YEESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQ-NLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       377 ~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~-~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                              ........+..|...++.++...+.+ . .++++||||.+|+.|++.||+|++++.
T Consensus       195 --------~~~~~~~~~Kp~~~~~~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~~~~~  249 (282)
T 3nuq_A          195 --------YSRTDTLVCKPHVKAFEKAMKESGLA-RYENAYFIDDSGKNIETGIKLGMKTCIHL  249 (282)
T ss_dssp             --------CSSCSSCCCTTSHHHHHHHHHHHTCC-CGGGEEEEESCHHHHHHHHHHTCSEEEEE
T ss_pred             --------cCCCcccCCCcCHHHHHHHHHHcCCC-CcccEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence                    00011123345778888888877764 4 789999999999999999999776654

>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}

Probab=99.14  E-value=9e-11  Score=113.69  Aligned_cols=147  Identities=12%  Similarity=0.078  Sum_probs=117.0

Q ss_pred             cCCCCCHH--HHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccc
Q 010855            7 PSLSHDEE--DKLAIRKLRKRVK-QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIET   80 (499)
Q Consensus         7 ~~~a~d~~--~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~   80 (499)
                      ++|++|.+  .+..+...+.... .|..+|+. ++.+|++.++  ..+|+|+|.+|++||++++ .|++           
T Consensus        63 ~~ka~~~~~~~~~~~~~~~~~e~~~e~~~~~~-l~~~G~~~~~~~~~~~~pat~aY~~~l~~~a~~~~~-----------  130 (239)
T 3dde_A           63 GIMGKDLPGKYLSFCFHHAHEEAGHELMALSD-IASIGFDREDVLSSKPLPATETLIAYLYWISATGNP-----------  130 (239)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHTTTHHHHHHH-HHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHHSSCG-----------
T ss_pred             HHhCCCchHHHHHHHHHHHHHHHChHHHHHHH-HHHhCCCHHHHHhCCCChHHHHHHHHHHHHHhCCCH-----------
Confidence            57888876  7888887766555 67666666 8899999764  6788999999999999999 5776           


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh----hcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHH
Q 010855           81 PFEKIKVAAYTLSAISPCMRLFEVIAKEIQA----LLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEE  156 (499)
Q Consensus        81 ~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~----~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e  156 (499)
                              +.+++++++|+|+| .+|..+.+    ..+.  +. ....|+..++..+-. -+..+.++||++.  .++++
T Consensus       131 --------~~~la~~~~~E~~y-~~~~~~~~~l~~~~~l--~~-~~~~f~~~h~~~d~~-h~~~~~~~ld~~~--~~~~~  195 (239)
T 3dde_A          131 --------VQRLGYSYWAENVY-GYIDPVLKAIQSTLDL--TP-QSMKFFIAHSKIDAK-HAEEVNEMLHEVC--KTQED  195 (239)
T ss_dssp             --------GGGHHHHHHHHTCH-HHHHHHHHHHHHHTTC--CG-GGGHHHHHHHHHHHH-HHHHHHHHHHHHC--CSHHH
T ss_pred             --------HHHHHHHHHHHHhh-HHHHHHHHHHHHHhCc--CH-HHHHHHHHHHhcchh-HHHHHHHHHHHHc--CCHHH
Confidence                    46899999999999 77776543    2221  22 247899999876654 4578999999986  58899


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCC
Q 010855          157 LEVIKKLYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       157 ~~~~~~~F~~a~~lE~~Fw~~a~~  180 (499)
                      ++++.+..+.++++.+.||++.+.
T Consensus       196 ~~~ii~~a~~~~~l~~~~f~~l~~  219 (239)
T 3dde_A          196 VDSVVAVMENSLVLTARILDDVWK  219 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998865

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.12  E-value=9.8e-09  Score=96.51  Aligned_cols=102  Identities=12%  Similarity=0.096  Sum_probs=76.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++ +|   +++.|+|.+. ...++..++..|+..  ..+++.           ..   ...+..|
T Consensus       104 ~~~~~~~~~~~~l~~l~-~g---~~~~i~sn~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~---~~~~kp~  164 (240)
T 3qnm_A          104 TKSGLMPHAKEVLEYLA-PQ---YNLYILSNGF-RELQSRKMRSAGVDRYFKKIILS-----------ED---LGVLKPR  164 (240)
T ss_dssp             GCCCBSTTHHHHHHHHT-TT---SEEEEEECSC-HHHHHHHHHHHTCGGGCSEEEEG-----------GG---TTCCTTS
T ss_pred             hcCCcCccHHHHHHHHH-cC---CeEEEEeCCc-hHHHHHHHHHcChHhhceeEEEe-----------cc---CCCCCCC
Confidence            35789999999999999 88   9999999884 678888888766532  122221           11   1123346


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEEcCC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~~~~  440 (499)
                      ...++.+++..+.+ +.++++||||. +|+.|++.||+++++.+.
T Consensus       165 ~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~  208 (240)
T 3qnm_A          165 PEIFHFALSATQSE-LRESLMIGDSWEADITGAHGVGMHQAFYNV  208 (240)
T ss_dssp             HHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHcCCeEEEEcC
Confidence            77888888877764 58899999995 999999999998777654

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.09  E-value=3e-09  Score=100.98  Aligned_cols=112  Identities=10%  Similarity=-0.012  Sum_probs=80.3

Q ss_pred             CCHHHHHHHh---hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeecc
Q 010855          309 LNLEDIKWAS---QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGE  385 (499)
Q Consensus       309 i~~~~l~~~~---~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~  385 (499)
                      ++.+.+..+.   ..+.+.||+.++++.++++    +++.|+|.+ +...++.+++..|+.          |+ .+.++.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~i~t~~-~~~~~~~~l~~~~~~----------f~-~~~~~~  163 (254)
T 3umg_A          100 HDSGELDELARAWHVLTPWPDSVPGLTAIKAE----YIIGPLSNG-NTSLLLDMAKNAGIP----------WD-VIIGSD  163 (254)
T ss_dssp             SCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH----SEEEECSSS-CHHHHHHHHHHHTCC----------CS-CCCCHH
T ss_pred             CCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC----CeEEEEeCC-CHHHHHHHHHhCCCC----------ee-EEEEcC
Confidence            3445544443   4678899999999999874    689999987 477888888877653          11 112211


Q ss_pred             ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          386 IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       386 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      ..   ..+..|...++.+++..+.+ ..++++|||+.+|+.|++.||+++++...
T Consensus       164 ~~---~~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~  214 (254)
T 3umg_A          164 IN---RKYKPDPQAYLRTAQVLGLH-PGEVMLAAAHNGDLEAAHATGLATAFILR  214 (254)
T ss_dssp             HH---TCCTTSHHHHHHHHHHTTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             cC---CCCCCCHHHHHHHHHHcCCC-hHHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence            11   12234667888888877764 58899999999999999999998887664

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.07  E-value=2.8e-09  Score=100.70  Aligned_cols=96  Identities=9%  Similarity=-0.009  Sum_probs=72.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+. ...++.+++..|+..  ..+++.           ..   ...+..|
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~---~~~~kp~  162 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAG---FRLAMATSKV-EKAARAIAELTGLDTRLTVIAGD-----------DS---VERGKPH  162 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTT---EEEEEECSSC-HHHHHHHHHHHTGGGTCSEEECT-----------TT---SSSCTTS
T ss_pred             cCCccCCCHHHHHHHHHhCC---CcEEEEcCCC-hHHHHHHHHHcCchhheeeEEeC-----------CC---CCCCCCC
Confidence            56789999999999999999   9999999985 678888888776532  122221           11   1123346


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI  433 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi  433 (499)
                      ...++.+++..+.+ ..++++||||.+|+.|++.||+
T Consensus       163 ~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~  198 (237)
T 4ex6_A          163 PDMALHVARGLGIP-PERCVVIGDGVPDAEMGRAAGM  198 (237)
T ss_dssp             SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCC
Confidence            67777777776663 5789999999999999999998

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.07  E-value=2.9e-09  Score=100.38  Aligned_cols=103  Identities=17%  Similarity=0.226  Sum_probs=74.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  ..+++.+           -   ...+..|
T Consensus       100 ~~~~~~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~  161 (231)
T 3kzx_A          100 DNFMLNDGAIELLDTLKENN---ITMAIVSNKN-GERLRSEIHHKNLTHYFDSIIGSG-----------D---TGTIKPS  161 (231)
T ss_dssp             CCCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEET-----------S---SSCCTTS
T ss_pred             ccceECcCHHHHHHHHHHCC---CeEEEEECCC-HHHHHHHHHHCCchhheeeEEccc-----------c---cCCCCCC
Confidence            36789999999999999999   9999999985 678899998877642  2222221           0   1112234


Q ss_pred             HHHHHHHHhhcCCCCCc-eEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          397 LQAFNDILKDHSNDEQN-LTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~-~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      ...++.+++..+.+ .. ++++||||.+|+.|++.||+ +|.++..
T Consensus       162 ~~~~~~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~  206 (231)
T 3kzx_A          162 PEPVLAALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYGST  206 (231)
T ss_dssp             SHHHHHHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred             hHHHHHHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence            56666677666654 45 79999999999999999997 5666543

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.06  E-value=2e-09  Score=100.84  Aligned_cols=97  Identities=9%  Similarity=0.015  Sum_probs=74.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  ..+++.           ..   ...+..|.
T Consensus        84 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~---~~~~kp~~  145 (226)
T 3mc1_A           84 ENKVYDGIEALLSSLKDYG---FHLVVATSKP-TVFSKQILEHFKLAFYFDAIVGS-----------SL---DGKLSTKE  145 (226)
T ss_dssp             SCCBCTTHHHHHHHHHHHT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEE-----------CT---TSSSCSHH
T ss_pred             cCccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhCCHhheeeeecc-----------CC---CCCCCCCH
Confidence            4689999999999999999   9999999985 678899998877642  222222           11   11233577


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ..++.+++..+.+ +.++++||||.+|+.|++.||+..
T Consensus       146 ~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~  182 (226)
T 3mc1_A          146 DVIRYAMESLNIK-SDDAIMIGDREYDVIGALKNNLPS  182 (226)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHTTTCCE
T ss_pred             HHHHHHHHHhCcC-cccEEEECCCHHHHHHHHHCCCCE
Confidence            8888888877764 478999999999999999999843

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.05  E-value=3.7e-09  Score=100.51  Aligned_cols=100  Identities=11%  Similarity=0.040  Sum_probs=73.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ..+.+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  ..+++.           ...   ..+..|
T Consensus       102 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~~---~~~Kp~  163 (240)
T 2no4_A          102 KELSAYPDAAETLEKLKSAG---YIVAILSNGN-DEMLQAALKASKLDRVLDSCLSA-----------DDL---KIYKPD  163 (240)
T ss_dssp             HTCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEG-----------GGT---TCCTTS
T ss_pred             hcCCCCCCHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHhcCcHHHcCEEEEc-----------ccc---CCCCCC
Confidence            46789999999999999999   9999999884 778899998877632  223222           111   112235


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      ...++.+++..+.+ +.++++|||+.+|+.|++.||+.++.
T Consensus       164 ~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~  203 (240)
T 2no4_A          164 PRIYQFACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVR  203 (240)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEE
Confidence            56666666665553 57899999999999999999986554

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.05  E-value=1.8e-08  Score=96.84  Aligned_cols=147  Identities=8%  Similarity=0.009  Sum_probs=93.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ..+.+.||+.++++.++  |   +++.|+|.+. ...++..++..|+..  ..+++           +...   ..+..|
T Consensus        90 ~~~~~~~~~~~~l~~l~--g---~~~~i~t~~~-~~~~~~~l~~~gl~~~f~~~~~-----------~~~~---~~~Kp~  149 (253)
T 1qq5_A           90 NRLTPYPDAAQCLAELA--P---LKRAILSNGA-PDMLQALVANAGLTDSFDAVIS-----------VDAK---RVFKPH  149 (253)
T ss_dssp             GSCCBCTTHHHHHHHHT--T---SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEE-----------GGGG---TCCTTS
T ss_pred             hcCCCCccHHHHHHHHc--C---CCEEEEeCcC-HHHHHHHHHHCCchhhccEEEE-----------cccc---CCCCCC
Confidence            35789999999999998  7   8999999984 778888998877532  12222           1111   122335


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC---chHHhhhhhhCCccccccchHHHHHHHhhcCCC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS---SSLRRLGDHFGVSFVPLFSSLVERQKELVDGSS  473 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~---~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~  473 (499)
                      ...++.+++..+.+ ..++++|||+.+|+.|++.|++++++...   ..|.+..+   .-++|......+..     ...
T Consensus       150 ~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~---~g~~~~~~~~~~~~-----~~~  220 (253)
T 1qq5_A          150 PDSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELV---SGTIAPLTMFKALR-----MRE  220 (253)
T ss_dssp             HHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTT---SSSCCHHHHHHHHH-----SSC
T ss_pred             HHHHHHHHHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcc---cccccccccccccc-----ccc
Confidence            56677777666553 57899999999999999999997766554   33443333   33333332111110     000


Q ss_pred             ccccccCCEEEEEcCHHHHHHhh
Q 010855          474 YKWKRLPGTLYTVSSWAEIHAFI  496 (499)
Q Consensus       474 ~~~~~~~g~ly~~~~W~~i~~~~  496 (499)
                      .  ....+.-|.+.++.++.++|
T Consensus       221 ~--~~~~~~~~~~~~~~el~~~l  241 (253)
T 1qq5_A          221 E--TYAEAPDFVVPALGDLPRLV  241 (253)
T ss_dssp             C--TTSCCCSEEESSGGGHHHHH
T ss_pred             C--CCCCCCCeeeCCHHHHHHHH
Confidence            0  11123457889999988776

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.05  E-value=3.3e-09  Score=100.71  Aligned_cols=101  Identities=9%  Similarity=0.067  Sum_probs=76.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  ..+++.           ..   ...+..|.
T Consensus       108 ~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~---~~~~kp~~  169 (240)
T 3sd7_A          108 ENKIYENMKEILEMLYKNG---KILLVATSKP-TVFAETILRYFDIDRYFKYIAGS-----------NL---DGTRVNKN  169 (240)
T ss_dssp             CCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEE-----------CT---TSCCCCHH
T ss_pred             ccccCccHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHHHHHcCcHhhEEEEEec-----------cc---cCCCCCCH
Confidence            4789999999999999999   9999999985 778899998877632  222221           11   11233577


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIG  438 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~  438 (499)
                      ..++.+++..+.+...++++||||.+|+.|++.||+. |.+.
T Consensus       170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~  211 (240)
T 3sd7_A          170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVL  211 (240)
T ss_dssp             HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEe
Confidence            7888888777663257899999999999999999984 4444

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.04  E-value=9.4e-10  Score=102.20  Aligned_cols=103  Identities=13%  Similarity=0.093  Sum_probs=78.9

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc----eEEEeeceEeeCCeeeccccccCCCh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA----FRVHSNELVYEESISTGEIVNKLESP  393 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~----~~I~aN~l~~~~g~~tG~~~~~~~~g  393 (499)
                      .....+.||+.++++.++++|   ++++|+|.+. ...++..++..|+..    ..|++.           .    ...+
T Consensus        66 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~i~~~-----------~----~~~~  126 (205)
T 3m9l_A           66 AQGSRPAPGAVELVRELAGRG---YRLGILTRNA-RELAHVTLEAIGLADCFAEADVLGR-----------D----EAPP  126 (205)
T ss_dssp             EEEEEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGSCGGGEECT-----------T----TSCC
T ss_pred             hhcCCCCccHHHHHHHHHhcC---CeEEEEeCCc-hHHHHHHHHHcCchhhcCcceEEeC-----------C----CCCC
Confidence            456789999999999999999   9999999985 778899998877631    112221           1    1122


Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      ..|...++.+++..+.+ ..++++||||.+|+.|++.||+ +|++.+.
T Consensus       127 kp~~~~~~~~~~~~g~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~  173 (205)
T 3m9l_A          127 KPHPGGLLKLAEAWDVS-PSRMVMVGDYRFDLDCGRAAGTRTVLVNLP  173 (205)
T ss_dssp             TTSSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEECSSS
T ss_pred             CCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCEEEEEeCC
Confidence            33556777777777664 5789999999999999999998 8888765

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.04  E-value=5.1e-09  Score=96.52  Aligned_cols=123  Identities=11%  Similarity=0.004  Sum_probs=82.2

Q ss_pred             CHHHHHHH-hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccc
Q 010855          310 NLEDIKWA-SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEI  386 (499)
Q Consensus       310 ~~~~l~~~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~  386 (499)
                      ..+.+.+. .+...+.||+.++++.++++|    ++.|+|.+. ...++..++..|+..  ..+++           +..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~~~i~s~~~-~~~~~~~l~~~~~~~~f~~~~~-----------~~~  136 (200)
T 3cnh_A           73 TPEDFRAVMEEQSQPRPEVLALARDLGQRY----RMYSLNNEG-RDLNEYRIRTFGLGEFLLAFFT-----------SSA  136 (200)
T ss_dssp             CHHHHHHHHHHTCCBCHHHHHHHHHHTTTS----EEEEEECCC-HHHHHHHHHHHTGGGTCSCEEE-----------HHH
T ss_pred             CHHHHHHHHHhcCccCccHHHHHHHHHHcC----CEEEEeCCc-HHHHHHHHHhCCHHHhcceEEe-----------ecc
Confidence            44444443 456679999999999998765    799999884 778888888766531  12222           111


Q ss_pred             cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC-CchHHhhhhhhCC
Q 010855          387 VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS-SSSLRRLGDHFGV  452 (499)
Q Consensus       387 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~-~~~L~~~~~~~gi  452 (499)
                      .+   .+.-+...++.+++..+.+ ..++++||||.+|+.|++.|++.+++.. ...+.+.+++.|+
T Consensus       137 ~~---~~Kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~~~g~  199 (200)
T 3cnh_A          137 LG---VMKPNPAMYRLGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELAALGV  199 (200)
T ss_dssp             HS---CCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTC
T ss_pred             cC---CCCCCHHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHHHhcc
Confidence            10   1112344566666655553 5789999999999999999998666544 4566666666665

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.04  E-value=5.5e-09  Score=98.50  Aligned_cols=102  Identities=8%  Similarity=-0.029  Sum_probs=74.7

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+. ...++..++..++..  ..+++.+           .   ...+..|
T Consensus        92 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~-----------~---~~~~Kp~  153 (232)
T 1zrn_A           92 LRLAPFSEVPDSLRELKRRG---LKLAILSNGS-PQSIDAVVSHAGLRDGFDHLLSVD-----------P---VQVYKPD  153 (232)
T ss_dssp             GGCEECTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEESG-----------G---GTCCTTS
T ss_pred             ccCCCCccHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHhcChHhhhheEEEec-----------c---cCCCCCC
Confidence            35789999999999999999   9999999884 678888998877632  2233221           1   1112234


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      ...++.+++..+.+ ..++++|||+.+|+.|++.|++++++..
T Consensus       154 ~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~  195 (232)
T 1zrn_A          154 NRVYELAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWIN  195 (232)
T ss_dssp             HHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred             HHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence            55666666665553 5789999999999999999999777643

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.02  E-value=1.4e-09  Score=100.09  Aligned_cols=100  Identities=13%  Similarity=0.061  Sum_probs=74.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ..+.||+.++++.++++|   +++.|+|.+. ...++..++..++..  ..+++.+           ..   ..+..|..
T Consensus        88 ~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~-----------~~---~~~kp~~~  149 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQG---LEIGLASSSV-KADIFRALEENRLQGFFDIVLSGE-----------EF---KESKPNPE  149 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGG-----------GC---SSCTTSSH
T ss_pred             CCcCchHHHHHHHHHHCC---CCEEEEeCCc-HHHHHHHHHHcCcHhheeeEeecc-----------cc---cCCCCChH
Confidence            468999999999999999   9999999884 778999998887632  2233321           11   11222456


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      .++.+++..+.+ ..++++||||.+|+.|++.||+++++..
T Consensus       150 ~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~  189 (214)
T 3e58_A          150 IYLTALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIR  189 (214)
T ss_dssp             HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEEC
Confidence            667777666653 5789999999999999999999766654

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=98.98  E-value=7.8e-09  Score=99.12  Aligned_cols=99  Identities=7%  Similarity=0.034  Sum_probs=71.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|.+. ...++.+++..|+..  ..+++.           ...   ....-|.
T Consensus       112 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~gl~~~f~~~~~~-----------~~~---~~~Kp~~  173 (243)
T 2hsz_A          112 ISRLYPNVKETLEALKAQG---YILAVVTNKP-TKHVQPILTAFGIDHLFSEMLGG-----------QSL---PEIKPHP  173 (243)
T ss_dssp             SCEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECT-----------TTS---SSCTTSS
T ss_pred             cCccCCCHHHHHHHHHHCC---CEEEEEECCc-HHHHHHHHHHcCchheEEEEEec-----------ccC---CCCCcCH
Confidence            5688999999999999999   9999999984 778899998877632  122221           100   0111134


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      ..++.+++..+.+ ..++++||||.+|+.|++.|+++++.
T Consensus       174 ~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~  212 (243)
T 2hsz_A          174 APFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVG  212 (243)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence            4566666555553 57899999999999999999987543

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=98.97  E-value=1.2e-08  Score=97.14  Aligned_cols=104  Identities=13%  Similarity=0.055  Sum_probs=72.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      ...+.||+.++++.++++|   +++.|+|.+. ...+...++. ++...  ++++.     +.++..   ...+..|...
T Consensus       107 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~-~l~~~--f~~d~-----i~~~~~---~~~~kp~~~~  171 (243)
T 3qxg_A          107 EAERMPGAWELLQKVKSEG---LTPMVVTGSG-QLSLLERLEH-NFPGM--FHKEL-----MVTAFD---VKYGKPNPEP  171 (243)
T ss_dssp             CCCBCTTHHHHHHHHHHTT---CEEEEECCCC-CHHHHTTHHH-HSTTT--CCGGG-----EECTTT---CSSCTTSSHH
T ss_pred             cCCCCCCHHHHHHHHHHcC---CcEEEEeCCc-HHHHHHHHHH-hHHHh--cCcce-----EEeHHh---CCCCCCChHH
Confidence            4678999999999999999   9999999885 5667777766 65321  11111     111111   1122335567


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      ++.+++..+.+ +.++++|||+.+|+.|++.|+++ |.+..
T Consensus       172 ~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~  211 (243)
T 3qxg_A          172 YLMALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVNT  211 (243)
T ss_dssp             HHHHHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEeC
Confidence            77777776663 57899999999999999999984 44544

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=98.97  E-value=4.8e-09  Score=97.59  Aligned_cols=102  Identities=14%  Similarity=0.032  Sum_probs=74.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+. ...++..++..++..  ..+++.           ...   ..+..|
T Consensus        91 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~~~~~~~~~~~~-----------~~~---~~~kp~  152 (226)
T 1te2_A           91 ETRPLLPGVREAVALCKEQG---LLVGLASASP-LHMLEKVLTMFDLRDSFDALASA-----------EKL---PYSKPH  152 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEC-----------TTS---SCCTTS
T ss_pred             ccCCcCccHHHHHHHHHHCC---CcEEEEeCCc-HHHHHHHHHhcCcHhhCcEEEec-----------ccc---CCCCCC
Confidence            35788999999999999999   8999999874 678888888776532  122221           100   111123


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      ...++.+++..+.+ ..++++||||.||++|++.|++++++..
T Consensus       153 ~~~~~~~~~~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~  194 (226)
T 1te2_A          153 PQVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVP  194 (226)
T ss_dssp             THHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred             hHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEEEc
Confidence            56677777666653 5789999999999999999999888743

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.96  E-value=1.4e-08  Score=98.41  Aligned_cols=90  Identities=18%  Similarity=0.186  Sum_probs=73.0

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHH
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFN  401 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~  401 (499)
                      .++||+.++++.++++|   +++.|+|++- ...++.+++..|+.  .++.                 ...+.+|...++
T Consensus       144 ~~~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~--~~f~-----------------~~~~~~k~~~~k  200 (280)
T 3skx_A          144 RIRPESREAISKLKAIG---IKCMMLTGDN-RFVAKWVAEELGLD--DYFA-----------------EVLPHEKAEKVK  200 (280)
T ss_dssp             EECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEEC-----------------SCCGGGHHHHHH
T ss_pred             CCCHhHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCh--hHhH-----------------hcCHHHHHHHHH
Confidence            78999999999999999   9999999884 77888888887652  1111                 123447998888


Q ss_pred             HHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          402 DILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       402 ~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      .+...      .++++||||.||++|+..||+||+++..
T Consensus       201 ~~~~~------~~~~~vGD~~nDi~~~~~Ag~~va~~~~  233 (280)
T 3skx_A          201 EVQQK------YVTAMVGDGVNDAPALAQADVGIAIGAG  233 (280)
T ss_dssp             HHHTT------SCEEEEECTTTTHHHHHHSSEEEECSCC
T ss_pred             HHHhc------CCEEEEeCCchhHHHHHhCCceEEecCC
Confidence            87753      3689999999999999999999999864

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=98.95  E-value=1.3e-08  Score=92.72  Aligned_cols=102  Identities=15%  Similarity=0.129  Sum_probs=72.6

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc-e-EEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA-F-RVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~-~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ..+.||+.++++.++++|   +++.|+|.+  ...++..++..++.. + .+++           +..   ...+..|..
T Consensus        81 ~~~~~~~~~~l~~l~~~g---~~~~i~t~~--~~~~~~~l~~~~~~~~f~~~~~-----------~~~---~~~~kp~~~  141 (190)
T 2fi1_A           81 PILFEGVSDLLEDISNQG---GRHFLVSHR--NDQVLEILEKTSIAAYFTEVVT-----------SSS---GFKRKPNPE  141 (190)
T ss_dssp             CCBCTTHHHHHHHHHHTT---CEEEEECSS--CTHHHHHHHHTTCGGGEEEEEC-----------GGG---CCCCTTSCH
T ss_pred             CccCcCHHHHHHHHHHCC---CcEEEEECC--cHHHHHHHHHcCCHhheeeeee-----------ccc---cCCCCCCHH
Confidence            348999999999999999   999999976  346788888877532 1 1222           111   112223556


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHH
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLR  444 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~  444 (499)
                      .++.+++..+.+   ++++||||.+|+.|++.|+++++.... ..+.
T Consensus       142 ~~~~~~~~~~~~---~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~  185 (190)
T 2fi1_A          142 SMLYLREKYQIS---SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLR  185 (190)
T ss_dssp             HHHHHHHHTTCS---SEEEEESSHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred             HHHHHHHHcCCC---eEEEEcCCHHHHHHHHHcCCeEEEECCCCChh
Confidence            777777776652   899999999999999999997666543 4444

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.95  E-value=1.9e-09  Score=109.03  Aligned_cols=130  Identities=15%  Similarity=0.212  Sum_probs=80.8

Q ss_pred             cCCCHHHHHHHhhc-CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeC------
Q 010855          307 KGLNLEDIKWASQH-LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEE------  379 (499)
Q Consensus       307 ~Gi~~~~l~~~~~~-i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~------  379 (499)
                      .|....+..+.... ..+.+++.++++.+++ |   +++.|+|++. ..++...+...++. ..++++.+.+++      
T Consensus        87 nGa~i~~~~~~~~~~~~~~~~~~~~l~~l~~-g---~~~~i~t~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  160 (332)
T 1y8a_A           87 AGVKNRDVERIAELSAKFVPDAEKAMATLQE-R---WTPVVISTSY-TQYLRRTASMIGVR-GELHGTEVDFDSIAVPEG  160 (332)
T ss_dssp             TTCCHHHHHHHHHHHCCBCTTHHHHHHHHHT-T---CEEEEEEEEE-HHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHH
T ss_pred             CCcEEEECCeEeeccCCCHHHHHHHHHHHHc-C---CcEEEEECCc-eEEEcccchhhhhh-hhhcccccchhhhccccc
Confidence            34443333333344 6789999999999999 8   9999999874 45677666655542 234455433220      


Q ss_pred             ----------Ceee-------------------ccccc--cCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHH
Q 010855          380 ----------SIST-------------------GEIVN--KLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCL  428 (499)
Q Consensus       380 ----------g~~t-------------------G~~~~--~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l  428 (499)
                                +..+                   +.+..  ....+.+|...++.+....+   ...+++||||.||++|+
T Consensus       161 ~~k~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~---~~~via~GDs~NDi~ml  237 (332)
T 1y8a_A          161 LREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKG---IDFPVVVGDSISDYKMF  237 (332)
T ss_dssp             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHT---CSSCEEEECSGGGHHHH
T ss_pred             cceeEEecCHHHHhhhhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhc---CceEEEEeCcHhHHHHH
Confidence                      0111                   11110  23346678888875442110   12289999999999999


Q ss_pred             Hhc----CccEEEcCCchHHh
Q 010855          429 LEA----DIGIVIGSSSSLRR  445 (499)
Q Consensus       429 ~~A----digiv~~~~~~L~~  445 (499)
                      +.|    ++||+|.+.+.+.+
T Consensus       238 ~~A~~~~g~~vamna~~~lk~  258 (332)
T 1y8a_A          238 EAARGLGGVAIAFNGNEYALK  258 (332)
T ss_dssp             HHHHHTTCEEEEESCCHHHHT
T ss_pred             HHHhhcCCeEEEecCCHHHHh
Confidence            999    99999933445544

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=98.94  E-value=1.4e-08  Score=96.11  Aligned_cols=100  Identities=10%  Similarity=0.002  Sum_probs=70.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc----eEEEeeceEeeCCeeeccccccCCChhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA----FRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~----~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      ...+.||+.++++.++++|   +++.|+|.+. ...+...++. ++..    ..+++.           ..   ...+..
T Consensus       106 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~-~l~~~f~~~~~~~~-----------~~---~~~~kp  166 (247)
T 3dv9_A          106 KAERMPGALEVLTKIKSEG---LTPMVVTGSG-QTSLLDRLNH-NFPGIFQANLMVTA-----------FD---VKYGKP  166 (247)
T ss_dssp             CCCBCTTHHHHHHHHHHTT---CEEEEECSCC----CHHHHHH-HSTTTCCGGGEECG-----------GG---CSSCTT
T ss_pred             cCCCCCCHHHHHHHHHHcC---CcEEEEcCCc-hHHHHHHHHh-hHHHhcCCCeEEec-----------cc---CCCCCC
Confidence            4688999999999999999   9999999885 5567777776 6532    112221           11   112233


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      |...++.+++..+.+ +.++++||||.+|+.|++.||++ |.+..
T Consensus       167 ~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~  210 (247)
T 3dv9_A          167 NPEPYLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVNT  210 (247)
T ss_dssp             SSHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEECC
T ss_pred             CCHHHHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEcC
Confidence            556677777766653 57899999999999999999985 44544

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=98.93  E-value=1e-09  Score=103.71  Aligned_cols=102  Identities=8%  Similarity=-0.037  Sum_probs=74.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+. ...++.+++..|+..  ..+++.+           -   ...+..|
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~  141 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKG---FKLAVVSNKL-EELSKKILDILNLSGYFDLIVGGD-----------T---FGEKKPS  141 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECTT-----------S---SCTTCCT
T ss_pred             ccCccCCCHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCCHHHheEEEecC-----------c---CCCCCCC
Confidence            35789999999999999999   9999999884 778899998877632  2233221           0   1112235


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      ...++.+++..+.+ +.++++||||.+|+.|++.||++ |.+..
T Consensus       142 ~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~  184 (222)
T 2nyv_A          142 PTPVLKTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALW  184 (222)
T ss_dssp             THHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETT
T ss_pred             hHHHHHHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence            56666666665553 57899999999999999999986 55544

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=98.92  E-value=3.3e-08  Score=95.88  Aligned_cols=100  Identities=12%  Similarity=0.059  Sum_probs=71.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.||+.++++.++++|   +++.|+|.+- . .++.+++..|+..  ..+++           +.-.   ..+.-+.
T Consensus       104 ~~~~~~~~~~~l~~l~~~g---~~~~i~tn~~-~-~~~~~l~~~gl~~~f~~~~~-----------~~~~---~~~Kp~~  164 (263)
T 3k1z_A          104 TWQVLDGAEDTLRECRTRG---LRLAVISNFD-R-RLEGILGGLGLREHFDFVLT-----------SEAA---GWPKPDP  164 (263)
T ss_dssp             GEEECTTHHHHHHHHHHTT---CEEEEEESCC-T-THHHHHHHTTCGGGCSCEEE-----------HHHH---SSCTTSH
T ss_pred             cceECcCHHHHHHHHHhCC---CcEEEEeCCc-H-HHHHHHHhCCcHHhhhEEEe-----------eccc---CCCCCCH
Confidence            3578999999999999999   9999999763 3 4688888877632  12222           1111   1122345


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEEcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~~~  439 (499)
                      ..++..+...+.+ +.++++||||. +|+.|++.||+++++..
T Consensus       165 ~~~~~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~  206 (263)
T 3k1z_A          165 RIFQEALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVV  206 (263)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEEC
T ss_pred             HHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEc
Confidence            6666666666553 57899999997 99999999999777654

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=98.91  E-value=1.4e-08  Score=94.26  Aligned_cols=100  Identities=13%  Similarity=0.005  Sum_probs=73.1

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+- ...++..++..++..  ..+++.           ...   ..+..|
T Consensus        86 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~---~~~k~~  147 (225)
T 3d6j_A           86 ANTILFPDTLPTLTHLKKQG---IRIGIISTKY-RFRILSFLRNHMPDDWFDIIIGG-----------EDV---THHKPD  147 (225)
T ss_dssp             GGCEECTTHHHHHHHHHHHT---CEEEEECSSC-HHHHHHHHHTSSCTTCCSEEECG-----------GGC---SSCTTS
T ss_pred             ccCccCcCHHHHHHHHHHCC---CeEEEEECCC-HHHHHHHHHHcCchhheeeeeeh-----------hhc---CCCCCC
Confidence            35678899999999999999   8999999884 678888888776532  122221           111   112234


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      ...+..+++..+.+ ..++++||||.||+.|++.||+++++
T Consensus       148 ~~~~~~~~~~~~~~-~~~~i~iGD~~nDi~~~~~aG~~~~~  187 (225)
T 3d6j_A          148 PEGLLLAIDRLKAC-PEEVLYIGDSTVDAGTAAAAGVSFTG  187 (225)
T ss_dssp             THHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred             hHHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence            56677777766663 57899999999999999999997665

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=98.91  E-value=1.8e-08  Score=97.12  Aligned_cols=103  Identities=10%  Similarity=-0.021  Sum_probs=73.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc---eEEEeeceEeeCCeeeccccccCCChhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA---FRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      ....+.||+.++++.++++|   +++.|+|.+- ...++..++..++..   ..+++           +..   ...+..
T Consensus       108 ~~~~~~~~~~~~l~~l~~~g---~~~~i~tn~~-~~~~~~~l~~~~~~~~~~~~~~~-----------~~~---~~~~kp  169 (277)
T 3iru_A          108 QRSQLIPGWKEVFDKLIAQG---IKVGGNTGYG-PGMMAPALIAAKEQGYTPASTVF-----------ATD---VVRGRP  169 (277)
T ss_dssp             HTCCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHHHTTCCCSEEEC-----------GGG---SSSCTT
T ss_pred             ccCccCcCHHHHHHHHHHcC---CeEEEEeCCc-hHHHHHHHHhcCcccCCCceEec-----------HHh---cCCCCC
Confidence            35789999999999999999   9999999884 667788877654321   12222           111   122334


Q ss_pred             hHHHHHHHHhhcCCCCC-ceEEEEcCCcccHHHHHhcCcc-EEEcCC
Q 010855          396 KLQAFNDILKDHSNDEQ-NLTVYIGGSPGDLLCLLEADIG-IVIGSS  440 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~-~~vIyiGDs~tDl~~l~~Adig-iv~~~~  440 (499)
                      |...++.+++..+.+ . .++++||||.+|+.|++.||++ |.+..+
T Consensus       170 ~~~~~~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g  215 (277)
T 3iru_A          170 FPDMALKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS  215 (277)
T ss_dssp             SSHHHHHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred             CHHHHHHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence            667777777777663 5 7899999999999999999974 444433

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=98.91  E-value=2.2e-08  Score=96.27  Aligned_cols=102  Identities=8%  Similarity=-0.092  Sum_probs=76.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eE-EEeeceEeeCCeeeccccccCC-Chh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FR-VHSNELVYEESISTGEIVNKLE-SPL  394 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~-I~aN~l~~~~g~~tG~~~~~~~-~g~  394 (499)
                      ....+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  .. +++           +..   .. .+.
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~i~~-----------~~~---~~~~~K  168 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAG---VPFAIGSNSE-RGRLHLKLRVAGLTELAGEHIYD-----------PSW---VGGRGK  168 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHT---CCEEEECSSC-HHHHHHHHHHTTCHHHHCSCEEC-----------GGG---GTTCCT
T ss_pred             ccCCcCccHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHhcChHhhccceEEe-----------Hhh---cCcCCC
Confidence            56789999999999999999   9999999884 778899998877531  12 222           211   11 223


Q ss_pred             hhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          395 EKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       395 ~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      .|...++.+++..+.+ +.++++||||.+|+.|++.||++ |.+..
T Consensus       169 p~~~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~  213 (259)
T 4eek_A          169 PHPDLYTFAAQQLGIL-PERCVVIEDSVTGGAAGLAAGATLWGLLV  213 (259)
T ss_dssp             TSSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEECC
T ss_pred             CChHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCEEEEEcc
Confidence            3566777888777664 57899999999999999999997 44543

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=98.90  E-value=1.2e-08  Score=94.78  Aligned_cols=111  Identities=11%  Similarity=0.066  Sum_probs=75.8

Q ss_pred             CCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHc------CCCCc--eEEEeeceEee
Q 010855          309 LNLEDIKWASQ--HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFAS------GDLNA--FRVHSNELVYE  378 (499)
Q Consensus       309 i~~~~l~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~------~gl~~--~~I~aN~l~~~  378 (499)
                      .+.+++.+...  ...+.||+.++++.+++ |   ++++|+|.+. ...++.+++.      .++..  ..+++.     
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-g---~~~~i~t~~~-~~~~~~~~~~l~~~~~~~l~~~f~~~~~~-----  143 (211)
T 2i6x_A           74 LTYQQVYDALLGFLEEISAEKFDYIDSLRP-D---YRLFLLSNTN-PYVLDLAMSPRFLPSGRTLDSFFDKVYAS-----  143 (211)
T ss_dssp             CCHHHHHHHHGGGEEEECHHHHHHHHHHTT-T---SEEEEEECCC-HHHHHHHTSTTSSTTCCCGGGGSSEEEEH-----
T ss_pred             CCHHHHHHHHHHhhcccChHHHHHHHHHHc-C---CeEEEEeCCC-HHHHHHHHhhhccccccCHHHHcCeEEee-----
Confidence            45555554432  35789999999999998 8   9999999884 6778877776      45421  122221     


Q ss_pred             CCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          379 ESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       379 ~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                            ...   ..+..+...++.++...+.+ +.++++||||.+|+.|++.+|+++++..
T Consensus       144 ------~~~---~~~Kp~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~  194 (211)
T 2i6x_A          144 ------CQM---GKYKPNEDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCPD  194 (211)
T ss_dssp             ------HHH---TCCTTSHHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred             ------ccc---CCCCCCHHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence                  111   11122345666666666653 5789999999999999999999776654

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=98.90  E-value=8.7e-09  Score=97.02  Aligned_cols=99  Identities=8%  Similarity=-0.048  Sum_probs=68.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ..+.||+.++++.++++|   +++.|+|.+ ..  ++..++..|+..  ..+++.+           .   ...+.-|..
T Consensus        91 ~~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~--~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~~~  150 (233)
T 3nas_A           91 EDLLPGIGRLLCQLKNEN---IKIGLASSS-RN--APKILRRLAIIDDFHAIVDPT-----------T---LAKGKPDPD  150 (233)
T ss_dssp             GGSCTTHHHHHHHHHHTT---CEEEECCSC-TT--HHHHHHHTTCTTTCSEECCC-----------------------CC
T ss_pred             CCcCcCHHHHHHHHHHCC---CcEEEEcCc-hh--HHHHHHHcCcHhhcCEEeeHh-----------h---CCCCCCChH
Confidence            348999999999999999   999999987 22  778888877632  2222211           0   001112234


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      .++.++...+.+ +.++++||||.+|+.|++.||+++++.+.
T Consensus       151 ~~~~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~  191 (233)
T 3nas_A          151 IFLTAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGVGQ  191 (233)
T ss_dssp             HHHHHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEECC-
T ss_pred             HHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence            566666655553 57899999999999999999998887764

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=98.89  E-value=1.7e-08  Score=96.42  Aligned_cols=106  Identities=9%  Similarity=0.066  Sum_probs=71.5

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcC-CCC--ceEEEeeceEeeCCeeeccccccCCChh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASG-DLN--AFRVHSNELVYEESISTGEIVNKLESPL  394 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~-gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~  394 (499)
                      .....+.||+.++++.++++|   +++.|+|.+. ...+...+... ++.  ...+++           +.- .....+.
T Consensus       108 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~sn~~-~~~~~~~l~~~~~l~~~f~~~~~-----------~~~-~~~~~~K  171 (250)
T 3l5k_A          108 FPTAALMPGAEKLIIHLRKHG---IPFALATSSR-SASFDMKTSRHKEFFSLFSHIVL-----------GDD-PEVQHGK  171 (250)
T ss_dssp             GGGCCBCTTHHHHHHHHHHTT---CCEEEECSCC-HHHHHHHTTTCHHHHTTSSCEEC-----------TTC-TTCCSCT
T ss_pred             hccCCCCCCHHHHHHHHHhCC---CcEEEEeCCC-HHHHHHHHHhccCHHhheeeEEe-----------cch-hhccCCC
Confidence            346789999999999999999   9999999985 55666555432 221  111222           110 0111223


Q ss_pred             hhHHHHHHHHhhcCCCC-CceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          395 EKLQAFNDILKDHSNDE-QNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       395 ~K~~~l~~~~~~~~~~~-~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      -|...++.+++..+.+. +.++++||||.+|+.|++.||++++..+
T Consensus       172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~  217 (250)
T 3l5k_A          172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVP  217 (250)
T ss_dssp             TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred             CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence            35567788887776531 2789999999999999999998655433

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=98.87  E-value=9.3e-08  Score=89.68  Aligned_cols=102  Identities=10%  Similarity=0.034  Sum_probs=72.2

Q ss_pred             HHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCCh
Q 010855          316 WASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESP  393 (499)
Q Consensus       316 ~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g  393 (499)
                      ...+...+.||+.++++.++++    +++.|+|.+- ...++..++..|+..  ..+++.           ...   ..+
T Consensus        94 ~~~~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~~~~~f~~~~~~-----------~~~---~~~  154 (234)
T 3u26_A           94 MSQRYGELYPEVVEVLKSLKGK----YHVGMITDSD-TEQAMAFLDALGIKDLFDSITTS-----------EEA---GFF  154 (234)
T ss_dssp             HHHHHCCBCTTHHHHHHHHTTT----SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEH-----------HHH---TBC
T ss_pred             HHHhhCCcCcCHHHHHHHHHhC----CcEEEEECCC-HHHHHHHHHHcCcHHHcceeEec-----------ccc---CCC
Confidence            3345678999999999999764    6899999884 678888888877632  222221           111   112


Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEE
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVI  437 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~  437 (499)
                      ..|...++.+++..+.+ +.++++||||. ||+.|++.||++++.
T Consensus       155 kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~  198 (234)
T 3u26_A          155 KPHPRIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSIL  198 (234)
T ss_dssp             TTSHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEE
T ss_pred             CcCHHHHHHHHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEE
Confidence            23556677777766663 57899999997 999999999975444

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.87  E-value=1.3e-08  Score=100.25  Aligned_cols=116  Identities=8%  Similarity=0.043  Sum_probs=77.2

Q ss_pred             CCChhHHHHHHHHHHc-CCCcccEEEEeccC--------------------ChHHHHHHHHcCCCCceEEEeece-Eee-
Q 010855          322 IFQDGCRRFFQNTIKS-TNFKTDVHVLSYCW--------------------CGDLIRSAFASGDLNAFRVHSNEL-VYE-  378 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~-g~~~~~~~IVS~g~--------------------s~~~I~~~L~~~gl~~~~I~aN~l-~~~-  378 (499)
                      ...+++.++++.++++ |   +.+.+.+..-                    ....+..+++..|+. ..+..+.. ..+ 
T Consensus       122 ~~~~~v~e~l~~l~~~~g---~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~  197 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHN---ILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVS-VNINRCNPLAGDP  197 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSS---CCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEE-EEEEECCGGGTCC
T ss_pred             CCHHHHHHHHHHHHhhhC---ceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCC-EEEEEccccccCC
Confidence            6778999999999887 8   7777776530                    123566666665532 22222211 000 


Q ss_pred             CCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHh
Q 010855          379 ESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRR  445 (499)
Q Consensus       379 ~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~  445 (499)
                      ++..++.+.+   .+..|...++.+++..+.+ ..++++||||.||+.|+..|++||+++.. +.+.+
T Consensus       198 ~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~-~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~  261 (289)
T 3gyg_A          198 EDSYDVDFIP---IGTGKNEIVTFMLEKYNLN-TERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKN  261 (289)
T ss_dssp             TTEEEEEEEE---SCCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHH
T ss_pred             CCceEEEEEe---CCCCHHHHHHHHHHHcCCC-hhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHH
Confidence            1223333333   3456889999998877663 57899999999999999999999999775 34444

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=98.86  E-value=2.1e-07  Score=86.96  Aligned_cols=99  Identities=14%  Similarity=0.125  Sum_probs=72.4

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCC---hHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC---GDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s---~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      .+.||+.++++.++++|   +++.|+|.+ .   ...++..++..++..  ..+++.+          .+    ..+..|
T Consensus        99 ~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~~~~l~~~~l~~~f~~~~~~~----------~~----~~~kp~  160 (235)
T 2om6_A           99 LVLEGTKEALQFVKERG---LKTAVIGNV-MFWPGSYTRLLLERFGLMEFIDKTFFAD----------EV----LSYKPR  160 (235)
T ss_dssp             GBCTTHHHHHHHHHHTT---CEEEEEECC-CSSCHHHHHHHHHHTTCGGGCSEEEEHH----------HH----TCCTTC
T ss_pred             CcCccHHHHHHHHHHCC---CEEEEEcCC-cccchhHHHHHHHhCCcHHHhhhheecc----------cc----CCCCCC
Confidence            46999999999999999   999999986 3   567788888776532  1222211          00    111235


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~~~  439 (499)
                      ...++.+++..+.+ +.++++||||. ||+.|++.||+++++..
T Consensus       161 ~~~~~~~~~~lgi~-~~~~~~iGD~~~nDi~~a~~aG~~~~~~~  203 (235)
T 2om6_A          161 KEMFEKVLNSFEVK-PEESLHIGDTYAEDYQGARKVGMWAVWIN  203 (235)
T ss_dssp             HHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTSEEEEEC
T ss_pred             HHHHHHHHHHcCCC-ccceEEECCChHHHHHHHHHCCCEEEEEC
Confidence            56777777777664 57899999999 99999999999887744

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=98.85  E-value=5.5e-08  Score=92.49  Aligned_cols=99  Identities=11%  Similarity=0.054  Sum_probs=73.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|.+. ...++..++..|+..  ..+++           +...   ..+..|.
T Consensus        92 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~-----------~~~~---~~~Kp~~  153 (241)
T 2hoq_A           92 YLREVPGARKVLIRLKELG---YELGIITDGN-PVKQWEKILRLELDDFFEHVII-----------SDFE---GVKKPHP  153 (241)
T ss_dssp             HCCBCTTHHHHHHHHHHHT---CEEEEEECSC-HHHHHHHHHHTTCGGGCSEEEE-----------GGGG---TCCTTCH
T ss_pred             hCCCCccHHHHHHHHHHCC---CEEEEEECCC-chhHHHHHHHcCcHhhccEEEE-----------eCCC---CCCCCCH
Confidence            4678999999999999999   9999999874 678888888877642  22222           1111   1122355


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEE
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVI  437 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~  437 (499)
                      ..++.+++..+.+ +.++++||||. ||+.|++.||++++.
T Consensus       154 ~~~~~~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~  193 (241)
T 2hoq_A          154 KIFKKALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVW  193 (241)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEE
Confidence            6677777666653 57899999998 999999999986554

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=98.84  E-value=4.3e-09  Score=96.14  Aligned_cols=101  Identities=12%  Similarity=0.088  Sum_probs=70.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++|   +++.|+|.+- ...+. .++..++..  ..+++..          . .   ..+..+
T Consensus        82 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~-~~~~~~~~~~f~~~~~~~----------~-~---~~~Kp~  142 (207)
T 2go7_A           82 AQVVLMPGAREVLAWADESG---IQQFIYTHKG-NNAFT-ILKDLGVESYFTEILTSQ----------S-G---FVRKPS  142 (207)
T ss_dssp             GGCEECTTHHHHHHHHHHTT---CEEEEECSSC-THHHH-HHHHHTCGGGEEEEECGG----------G-C---CCCTTS
T ss_pred             ccceeCcCHHHHHHHHHHCC---CeEEEEeCCc-hHHHH-HHHHcCchhheeeEEecC----------c-C---CCCCCC
Confidence            45678999999999999999   9999999884 56777 777666532  1222211          0 0   011112


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      ...++.+++..+.+ ..++++||||.||+.|++.|+++ |++..
T Consensus       143 ~~~~~~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~~  185 (207)
T 2go7_A          143 PEAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLE  185 (207)
T ss_dssp             SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSC
T ss_pred             cHHHHHHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEec
Confidence            45566666665553 57899999999999999999997 55544

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=98.82  E-value=1.1e-06  Score=82.38  Aligned_cols=100  Identities=14%  Similarity=0.068  Sum_probs=72.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++    +++.|+|.+. ...++..++..|+..  ..+++           +..   ...+..|.
T Consensus       101 ~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~-----------~~~---~~~~kp~~  161 (238)
T 3ed5_A          101 GHQLIDGAFDLISNLQQQ----FDLYIVTNGV-SHTQYKRLRDSGLFPFFKDIFV-----------SED---TGFQKPMK  161 (238)
T ss_dssp             CCCBCTTHHHHHHHHHTT----SEEEEEECSC-HHHHHHHHHHTTCGGGCSEEEE-----------GGG---TTSCTTCH
T ss_pred             cCCCCccHHHHHHHHHhc----CeEEEEeCCC-HHHHHHHHHHcChHhhhheEEE-----------ecc---cCCCCCCh
Confidence            578999999999999864    6899999884 678888888877632  12222           111   11233467


Q ss_pred             HHHHHHHhhcC-CCCCceEEEEcCCc-ccHHHHHhcCcc-EEEcC
Q 010855          398 QAFNDILKDHS-NDEQNLTVYIGGSP-GDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~-~~~~~~vIyiGDs~-tDl~~l~~Adig-iv~~~  439 (499)
                      ..++.+++..+ .+ +.++++|||+. +|+.|++.||++ |.+..
T Consensus       162 ~~~~~~~~~~g~~~-~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~  205 (238)
T 3ed5_A          162 EYFNYVFERIPQFS-AEHTLIIGDSLTADIKGGQLAGLDTCWMNP  205 (238)
T ss_dssp             HHHHHHHHTSTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHcCCCC-hhHeEEECCCcHHHHHHHHHCCCEEEEECC
Confidence            78888888776 53 57899999998 999999999985 44443

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=98.82  E-value=1.5e-08  Score=93.49  Aligned_cols=120  Identities=10%  Similarity=0.056  Sum_probs=74.0

Q ss_pred             CCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHc-CCCC--ceEEEeeceEeeCCeee
Q 010855          309 LNLEDIKWASQ--HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFAS-GDLN--AFRVHSNELVYEESIST  383 (499)
Q Consensus       309 i~~~~l~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~-~gl~--~~~I~aN~l~~~~g~~t  383 (499)
                      .+.+++.+...  ...+.||+.++++.++++|   ++++|+|.+. ...++.++.. .|+.  ...+++.          
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~~~~~~~l~~~f~~~~~~----------  141 (206)
T 2b0c_A           76 LSYEQFSHGWQAVFVALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEIRDAADHIYLS----------  141 (206)
T ss_dssp             CCHHHHHHHHHTCEEEECHHHHHHHHHHHHTT---CEEEEEECCC-CCTTSCCGGGCHHHHHHCSEEEEH----------
T ss_pred             CCHHHHHHHHHHHhcccCccHHHHHHHHHHCC---CeEEEEECCC-hHHHHHHHHhccChhhheeeEEEe----------
Confidence            45555555433  3678999999999999999   9999999874 3343333332 2221  0122222          


Q ss_pred             ccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc-CCchHHhhh
Q 010855          384 GEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG-SSSSLRRLG  447 (499)
Q Consensus       384 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~-~~~~L~~~~  447 (499)
                       ...+   .+.-+...++.+++..+.+ ..++++||||.+|+.++..+|++++.. +...+.+..
T Consensus       142 -~~~~---~~Kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l  201 (206)
T 2b0c_A          142 -QDLG---MRKPEARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYF  201 (206)
T ss_dssp             -HHHT---CCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHHH
T ss_pred             -cccC---CCCCCHHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHHHHH
Confidence             1110   0111234555566555553 578999999999999999999865544 455555443

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=98.81  E-value=6.6e-08  Score=92.21  Aligned_cols=101  Identities=12%  Similarity=-0.007  Sum_probs=73.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCC-ceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLN-AFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~-~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ...+.||+.++++.++++|   +++.|+|.+. ...++..++..++. ...+++.+-              ...+..|..
T Consensus       108 ~~~~~~g~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~f~~~~~~~~--------------~~~~Kp~p~  169 (240)
T 2hi0_A          108 KTGPFPGILDLMKNLRQKG---VKLAVVSNKP-NEAVQVLVEELFPGSFDFALGEKS--------------GIRRKPAPD  169 (240)
T ss_dssp             SCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHSTTTCSEEEEECT--------------TSCCTTSSH
T ss_pred             cCCcCCCHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCcceeEEEecCC--------------CCCCCCCHH
Confidence            4678899999999999999   9999999884 66788888876653 223333210              112233556


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      .+...++..+.+ +.++++||||.+|+.|++.||+. |.+..
T Consensus       170 ~~~~~~~~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~~  210 (240)
T 2hi0_A          170 MTSECVKVLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVNW  210 (240)
T ss_dssp             HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred             HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEECC
Confidence            666776666653 57899999999999999999984 44443

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.79  E-value=1.2e-07  Score=89.52  Aligned_cols=119  Identities=12%  Similarity=-0.021  Sum_probs=77.1

Q ss_pred             CCHHHHHHHhhcC--CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHH------HcCCCCc--eEEEeeceEee
Q 010855          309 LNLEDIKWASQHL--IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAF------ASGDLNA--FRVHSNELVYE  378 (499)
Q Consensus       309 i~~~~l~~~~~~i--~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L------~~~gl~~--~~I~aN~l~~~  378 (499)
                      .+.+++.+.....  .+.||+.++++.++++    +++.|+|.+. ...++.++      +..++..  ..+++.     
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~i~Sn~~-~~~~~~~~~~l~~~~~~~l~~~fd~i~~~-----  166 (229)
T 4dcc_A           97 VSDKQIDAAWNSFLVDIPTYKLDLLLKLREK----YVVYLLSNTN-DIHWKWVCKNAFPYRTFKVEDYFEKTYLS-----  166 (229)
T ss_dssp             CCHHHHHHHHHTTBCCCCHHHHHHHHHHTTT----SEEEEEECCC-HHHHHHHHHHTSCBTTBCHHHHCSEEEEH-----
T ss_pred             CCHHHHHHHHHHHHHhccHHHHHHHHHHHhc----CcEEEEECCC-hHHHHHHHhhhhhhccCCHHHhCCEEEee-----
Confidence            4666776665432  5789999999999864    6999999884 66777555      4333311  122221     


Q ss_pred             CCeeeccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC-CchHHhhh
Q 010855          379 ESISTGEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS-SSSLRRLG  447 (499)
Q Consensus       379 ~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~-~~~L~~~~  447 (499)
                            .-.   ..+.-+...++..+...+.+ +.++++|||+.+|+.+++.||+++++.. ...+.+..
T Consensus       167 ------~~~---~~~KP~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~L  226 (229)
T 4dcc_A          167 ------YEM---KMAKPEPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHLF  226 (229)
T ss_dssp             ------HHH---TCCTTCHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred             ------ccc---CCCCCCHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence                  101   11112346677777666653 5789999999999999999999766544 45555443

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=98.79  E-value=2.7e-07  Score=85.97  Aligned_cols=98  Identities=10%  Similarity=-0.004  Sum_probs=70.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      +...+.||+.++++.++++|   +++.|+|.+. ...+...++..|+..  ..+++.+          .+    ..+.-+
T Consensus        81 ~~~~~~pg~~~~l~~L~~~g---~~~~i~tn~~-~~~~~~~l~~~~l~~~fd~~~~~~----------~~----~~~KP~  142 (216)
T 3kbb_A           81 ELLKENPGVREALEFVKSKR---IKLALATSTP-QREALERLRRLDLEKYFDVMVFGD----------QV----KNGKPD  142 (216)
T ss_dssp             HHCCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECGG----------GS----SSCTTS
T ss_pred             HhcccCccHHHHHHHHHHcC---CCcccccCCc-HHHHHHHHHhcCCCcccccccccc----------cc----CCCccc
Confidence            35678999999999999999   9999999884 778888888877642  2222211          00    011112


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      .+.+...++..+.. +.++++||||.+|+.+++.||+..
T Consensus       143 p~~~~~a~~~lg~~-p~e~l~VgDs~~Di~aA~~aG~~~  180 (216)
T 3kbb_A          143 PEIYLLVLERLNVV-PEKVVVFEDSKSGVEAAKSAGIER  180 (216)
T ss_dssp             THHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHhhCCC-ccceEEEecCHHHHHHHHHcCCcE
Confidence            34555566555553 578999999999999999999853

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=98.79  E-value=3.5e-08  Score=91.61  Aligned_cols=102  Identities=7%  Similarity=0.028  Sum_probs=71.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      ...+.||+.++++.++++|   +++.|+|.+   ..++..++..++...        | +.+.++...   ..+..|...
T Consensus        89 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~---~~~~~~l~~~~l~~~--------f-~~~~~~~~~---~~~Kp~~~~  150 (221)
T 2wf7_A           89 PADVYPGILQLLKDLRSNK---IKIALASAS---KNGPFLLERMNLTGY--------F-DAIADPAEV---AASKPAPDI  150 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTT---CEEEECCCC---TTHHHHHHHTTCGGG--------C-SEECCTTTS---SSCTTSSHH
T ss_pred             CCCCCCCHHHHHHHHHHCC---CeEEEEcCc---HHHHHHHHHcChHHH--------c-ceEeccccC---CCCCCChHH
Confidence            3578899999999999999   999999986   346677777665321        0 111111111   111123456


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      ++.+++..+.+ +.++++||||.||+.|++.||+++++.+.
T Consensus       151 ~~~~~~~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~~  190 (221)
T 2wf7_A          151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred             HHHHHHHcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEECC
Confidence            67777766663 57899999999999999999999888764

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=98.77  E-value=1.6e-07  Score=87.89  Aligned_cols=104  Identities=10%  Similarity=-0.057  Sum_probs=68.4

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ....+.||+.++++.+++ |   +++.|+|.+- ...++..++..+.....+++..          .+...-....-...
T Consensus        96 ~~~~~~~~~~~~l~~l~~-~---~~~~i~tn~~-~~~~~~~l~~l~~~fd~i~~~~----------~~~~~KP~~~~~~~  160 (240)
T 3smv_A           96 KNWPAFPDTVEALQYLKK-H---YKLVILSNID-RNEFKLSNAKLGVEFDHIITAQ----------DVGSYKPNPNNFTY  160 (240)
T ss_dssp             GGCCBCTTHHHHHHHHHH-H---SEEEEEESSC-HHHHHHHHTTTCSCCSEEEEHH----------HHTSCTTSHHHHHH
T ss_pred             hcCCCCCcHHHHHHHHHh-C---CeEEEEeCCC-hhHHHHHHHhcCCccCEEEEcc----------ccCCCCCCHHHHHH
Confidence            467899999999999998 7   8999999884 6677777766432122333321          11111111111123


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEEcC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVIGS  439 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~~~  439 (499)
                      .++. +...+.+ +.++++||||. +|+.|++.||+++++..
T Consensus       161 ~l~~-~~~lgi~-~~~~~~vGD~~~~Di~~a~~aG~~~~~~~  200 (240)
T 3smv_A          161 MIDA-LAKAGIE-KKDILHTAESLYHDHIPANDAGLVSAWIY  200 (240)
T ss_dssp             HHHH-HHHTTCC-GGGEEEEESCTTTTHHHHHHHTCEEEEEC
T ss_pred             HHHH-HHhcCCC-chhEEEECCCchhhhHHHHHcCCeEEEEc
Confidence            3333 5555553 57899999996 99999999999877654

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.77  E-value=2.6e-07  Score=86.01  Aligned_cols=97  Identities=9%  Similarity=-0.039  Sum_probs=73.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|.  +++.|+|.+. ...++..++..++..  ..+++.                   +..|.
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~--~~~~i~t~~~-~~~~~~~l~~~~~~~~f~~~~~~-------------------~kpk~  160 (234)
T 3ddh_A          103 PIELLPGVKETLKTLKETGK--YKLVVATKGD-LLDQENKLERSGLSPYFDHIEVM-------------------SDKTE  160 (234)
T ss_dssp             CCCBCTTHHHHHHHHHHHCC--CEEEEEEESC-HHHHHHHHHHHTCGGGCSEEEEE-------------------SCCSH
T ss_pred             cCCcCccHHHHHHHHHhCCC--eEEEEEeCCc-hHHHHHHHHHhCcHhhhheeeec-------------------CCCCH
Confidence            56899999999999998651  6899999764 667888888766532  122210                   12377


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEEcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~~~  439 (499)
                      ..++.+++..+.+ +.++++||||. +|+.|++.|++++++..
T Consensus       161 ~~~~~~~~~lgi~-~~~~i~iGD~~~~Di~~a~~aG~~~v~v~  202 (234)
T 3ddh_A          161 KEYLRLLSILQIA-PSELLMVGNSFKSDIQPVLSLGGYGVHIP  202 (234)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHHTCEEEECC
T ss_pred             HHHHHHHHHhCCC-cceEEEECCCcHHHhHHHHHCCCeEEEec
Confidence            7888888777764 58899999996 99999999999777653

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=98.76  E-value=3.6e-08  Score=92.16  Aligned_cols=93  Identities=10%  Similarity=0.058  Sum_probs=71.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.+++ |   +++.|+|.+. ...++..++..|+..  ..|++.+                ..+..|.
T Consensus        82 ~~~~~~g~~~~l~~L~~-~---~~l~i~T~~~-~~~~~~~l~~~gl~~~f~~i~~~~----------------~~~Kp~p  140 (210)
T 2ah5_A           82 EAQLFPQIIDLLEELSS-S---YPLYITTTKD-TSTAQDMAKNLEIHHFFDGIYGSS----------------PEAPHKA  140 (210)
T ss_dssp             SCEECTTHHHHHHHHHT-T---SCEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEEC----------------SSCCSHH
T ss_pred             CCCCCCCHHHHHHHHHc-C---CeEEEEeCCC-HHHHHHHHHhcCchhheeeeecCC----------------CCCCCCh
Confidence            46788999999999998 8   9999999884 667888888877642  2333321                1123467


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      ..++..++..+.+ +.++++||||.+|+.+++.||+.
T Consensus       141 ~~~~~~~~~lg~~-p~~~~~vgDs~~Di~~a~~aG~~  176 (210)
T 2ah5_A          141 DVIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQ  176 (210)
T ss_dssp             HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCE
T ss_pred             HHHHHHHHHcCCC-cccEEEECCCHHHHHHHHHCCCc
Confidence            7888888777664 57899999999999999999973

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=98.75  E-value=4.1e-08  Score=90.99  Aligned_cols=99  Identities=13%  Similarity=0.155  Sum_probs=71.7

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++++    +++.|+|.+. ...++..++..|+..  ..+++.+                ..+..|
T Consensus        80 ~~~~~~~~~~~~l~~l~~~----~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~----------------~~~~~K  138 (209)
T 2hdo_A           80 DQIELYPGITSLFEQLPSE----LRLGIVTSQR-RNELESGMRSYPFMMRMAVTISAD----------------DTPKRK  138 (209)
T ss_dssp             GGCEECTTHHHHHHHSCTT----SEEEEECSSC-HHHHHHHHTTSGGGGGEEEEECGG----------------GSSCCT
T ss_pred             ccCCcCCCHHHHHHHHHhc----CcEEEEeCCC-HHHHHHHHHHcChHhhccEEEecC----------------cCCCCC
Confidence            4578999999999998753    6899999884 678888988876532  1122211                012235


Q ss_pred             --HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          397 --LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       397 --~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                        ...++.+++..+.+ +.++++||||.+|+.|++.||+++++..
T Consensus       139 P~~~~~~~~~~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~~  182 (209)
T 2hdo_A          139 PDPLPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAV  182 (209)
T ss_dssp             TSSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEG
T ss_pred             CCcHHHHHHHHHcCCC-cccEEEECCChhhHHHHHHcCCeEEEEc
Confidence              56677777666653 5789999999999999999999877644

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=98.75  E-value=4e-07  Score=85.30  Aligned_cols=105  Identities=12%  Similarity=0.147  Sum_probs=72.0

Q ss_pred             hcCCCChhHHHHHHHHHHc-CCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          319 QHLIFQDGCRRFFQNTIKS-TNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~-g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ....+.||+.++++.++++ |   +++.|+|++. ...++..++..|+...  +.       ...++.-..  ..+..+.
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~--f~-------~~~~~~~~~--~~~k~~~  154 (234)
T 2hcf_A           90 EDITLLEGVRELLDALSSRSD---VLLGLLTGNF-EASGRHKLKLPGIDHY--FP-------FGAFADDAL--DRNELPH  154 (234)
T ss_dssp             GGEEECTTHHHHHHHHHTCTT---EEEEEECSSC-HHHHHHHHHTTTCSTT--CS-------CEECTTTCS--SGGGHHH
T ss_pred             CCCCcCCCHHHHHHHHHhCCC---ceEEEEcCCc-HHHHHHHHHHCCchhh--cC-------cceecCCCc--CccchHH
Confidence            3567899999999999999 8   9999999985 6788888988776321  00       011111000  0111234


Q ss_pred             HHHHHHHhhcC--CCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          398 QAFNDILKDHS--NDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~--~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      ..++.+++..+  . ...++++||||.+|+.|++.||++ |.+..
T Consensus       155 ~~~~~~~~~lg~~~-~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~  198 (234)
T 2hcf_A          155 IALERARRMTGANY-SPSQIVIIGDTEHDIRCARELDARSIAVAT  198 (234)
T ss_dssp             HHHHHHHHHHCCCC-CGGGEEEEESSHHHHHHHHTTTCEEEEECC
T ss_pred             HHHHHHHHHhCCCC-CcccEEEECCCHHHHHHHHHCCCcEEEEcC
Confidence            55666666655  3 357899999999999999999976 44443

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=98.71  E-value=3.6e-08  Score=96.37  Aligned_cols=101  Identities=12%  Similarity=0.021  Sum_probs=72.4

Q ss_pred             hcCCCChhHHHHHHHHHHc-CCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          319 QHLIFQDGCRRFFQNTIKS-TNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~-g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ....+.||+.++++.++++ |   +++.|+|.+. ...++..++..++....          .+.++.-   ...+..|.
T Consensus       111 ~~~~~~~g~~~~L~~l~~~~g---~~l~i~T~~~-~~~~~~~l~~~~l~~f~----------~i~~~~~---~~~~kp~~  173 (275)
T 2qlt_A          111 EHSIEVPGAVKLCNALNALPK---EKWAVATSGT-RDMAKKWFDILKIKRPE----------YFITAND---VKQGKPHP  173 (275)
T ss_dssp             TTCEECTTHHHHHHHHHTSCG---GGEEEECSSC-HHHHHHHHHHHTCCCCS----------SEECGGG---CSSCTTSS
T ss_pred             cCCCcCcCHHHHHHHHHhccC---CeEEEEeCCC-HHHHHHHHHHcCCCccC----------EEEEccc---CCCCCCCh
Confidence            4567899999999999998 8   9999999884 67888888876653211          1112111   11122355


Q ss_pred             HHHHHHHhhcCC-------CCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          398 QAFNDILKDHSN-------DEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       398 ~~l~~~~~~~~~-------~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      ..++.+++..+.       + +.++++||||.||+.|++.||+++++
T Consensus       174 ~~~~~~~~~lgi~~~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~  219 (275)
T 2qlt_A          174 EPYLKGRNGLGFPINEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVG  219 (275)
T ss_dssp             HHHHHHHHHTTCCCCSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHcCCCccccCCC-cceEEEEeCCHHHHHHHHHcCCEEEE
Confidence            566666666655       3 47899999999999999999987665

>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}

Probab=98.71  E-value=5.2e-08  Score=98.81  Aligned_cols=148  Identities=11%  Similarity=0.076  Sum_probs=106.2

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH----HH---HHHHHHHHHHhCCCCCC-CCCCChhhHHHHHHHHHHh-cCCccccccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK----QK---LKTLDSLVREWGFELPE-EIITDDATVKCTDFLLSTA-SGKVEGEKVLGK   77 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~----~E---~~~h~~~~~~~g~~~~~-~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~   77 (499)
                      .+++++.+.+..+.+.+-.-.    .|   .++|..+++.+|++.+. ..+..|++..|++|++.++ .|++        
T Consensus       164 ~a~~~~~~~r~~l~e~i~DE~G~g~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~~~~~~--------  235 (332)
T 3bjd_A          164 LVNLTDVDEAAALARYLYGELGEEDEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAFRHAEV--------  235 (332)
T ss_dssp             HHTCCSHHHHHHHHHHHHHHTTTTCGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHHHCSST--------
T ss_pred             HcCCCCHHHHHHHHHHHHHHhCCCCccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHHhcCCH--------
Confidence            678999888777766432222    34   79999999999999863 4556899999999999998 6776        


Q ss_pred             ccchhhhhhhHHHHHHHHH----HHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCC
Q 010855           78 IETPFEKIKVAAYTLSAIS----PCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLT  153 (499)
Q Consensus        78 ~~~~~~~~~~~~~~l~Al~----PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~  153 (499)
                                 .+++++++    ||.|+|..+++.+.+...+....+.|+.||+.-....+..+    ..+++++.   +
T Consensus       236 -----------~~alaal~~~E~~~p~~y~~i~~~l~~~g~~~~~~~yf~~HI~lD~~H~~~~~----~~ll~~~~---~  297 (332)
T 3bjd_A          236 -----------GWGLAVFYITELVVPGNHEKLYRALLQAGLSEDQAEYYKVHISLVPPRAKREW----QLIARRIP---D  297 (332)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTTHHHHHHHHHCC---CTTH----HHHHTTTT---C
T ss_pred             -----------HHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCcccchHHHHHHHHhHHHHHHHH----HHHHHhCC---C
Confidence                       56888888    99999999999998742212133899999998654332222    33666652   4


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010855          154 GEELEVIKKLYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       154 ~~e~~~~~~~F~~a~~lE~~Fw~~a~~  180 (499)
                      +++.+.+..+-.+++++++.|||..+.
T Consensus       298 ~~~q~~~~~a~~~~l~~~~~f~D~l~~  324 (332)
T 3bjd_A          298 VQFQNAFLTSLSQHFRVERAYYDAIWE  324 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444445666666666999999997653

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=98.69  E-value=1.3e-07  Score=88.29  Aligned_cols=103  Identities=12%  Similarity=0.083  Sum_probs=70.8

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCCh--hhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESP--LEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g--~~K  396 (499)
                      ..+.+.||+.++++.++      .++.|+|.+- ...++..++..++...        |++.+.++...   ..+  ..|
T Consensus        84 ~~~~~~~~~~~~l~~l~------~~~~i~s~~~-~~~~~~~l~~~~l~~~--------~~~~~~~~~~~---~~~~~kpk  145 (229)
T 2fdr_A           84 RDVKIIDGVKFALSRLT------TPRCICSNSS-SHRLDMMLTKVGLKPY--------FAPHIYSAKDL---GADRVKPK  145 (229)
T ss_dssp             HHCCBCTTHHHHHHHCC------SCEEEEESSC-HHHHHHHHHHTTCGGG--------TTTCEEEHHHH---CTTCCTTS
T ss_pred             cCCccCcCHHHHHHHhC------CCEEEEECCC-hhHHHHHHHhCChHHh--------ccceEEecccc---ccCCCCcC
Confidence            35778899999988764      3789999884 6788888888765310        00112222211   122  346


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcCC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGSS  440 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~~  440 (499)
                      ...++.+++..+.+ ..++++||||.+|+.|++.||++ |.+.+.
T Consensus       146 ~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~  189 (229)
T 2fdr_A          146 PDIFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGA  189 (229)
T ss_dssp             SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred             HHHHHHHHHHcCCC-hhHeEEEcCCHHHHHHHHHCCCEEEEEecC
Confidence            67777777766663 57899999999999999999996 556554

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.67  E-value=2.2e-07  Score=85.70  Aligned_cols=102  Identities=11%  Similarity=0.050  Sum_probs=70.7

Q ss_pred             HHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCC
Q 010855          314 IKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLE  391 (499)
Q Consensus       314 l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~  391 (499)
                      +.+......+.||+.+ ++.++++    +++.|+|.+. ...++..++..|+..  ..+++.+           -.   .
T Consensus        66 ~~~~~~~~~~~~~~~~-l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~-----------~~---~  125 (201)
T 2w43_A           66 ELNKWKNLKAYEDTKY-LKEISEI----AEVYALSNGS-INEVKQHLERNGLLRYFKGIFSAE-----------SV---K  125 (201)
T ss_dssp             HHHHHHTCEECGGGGG-HHHHHHH----SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGG-----------GG---T
T ss_pred             HHHhhcccccCCChHH-HHHHHhC----CeEEEEeCcC-HHHHHHHHHHCCcHHhCcEEEehh-----------hc---C
Confidence            3333446789999999 9999865    5899999884 778899998877632  2233221           11   1


Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG  438 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~  438 (499)
                      .+..|...+..+++..+   +.++++||||.+|+.|++.|++++++.
T Consensus       126 ~~Kp~~~~~~~~~~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~~  169 (201)
T 2w43_A          126 EYKPSPKVYKYFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIFV  169 (201)
T ss_dssp             CCTTCHHHHHHHHHHHT---CSCCEEEESCHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCHHHHHHHHHhcC---CCcEEEEeCCHHHhHHHHHCCCEEEEE
Confidence            11124566666666554   367999999999999999999876553

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=98.67  E-value=7e-08  Score=92.95  Aligned_cols=105  Identities=8%  Similarity=-0.014  Sum_probs=71.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ....+.||+.++++.++++|   +++.|+|.+- ...++.+++..++...  +      .+.+.++...   ..+..|..
T Consensus       100 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~~~~~--~------~~~~~~~~~~---~~~kp~~~  164 (267)
T 1swv_A          100 RYASPINGVKEVIASLRERG---IKIGSTTGYT-REMMDIVAKEAALQGY--K------PDFLVTPDDV---PAGRPYPW  164 (267)
T ss_dssp             GGCCBCTTHHHHHHHHHHTT---CEEEEBCSSC-HHHHHHHHHHHHHTTC--C------CSCCBCGGGS---SCCTTSSH
T ss_pred             cccccCccHHHHHHHHHHcC---CeEEEEcCCC-HHHHHHHHHHcCCccc--C------hHheecCCcc---CCCCCCHH
Confidence            35678899999999999999   9999999874 6677777765442111  0      0112222211   12234666


Q ss_pred             HHHHHHhhcCCCCC-ceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          399 AFNDILKDHSNDEQ-NLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       399 ~l~~~~~~~~~~~~-~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      .+..+++..+.+ . .++++||||.||+.|++.||++ |.+..
T Consensus       165 ~~~~~~~~lgi~-~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~  206 (267)
T 1swv_A          165 MCYKNAMELGVY-PMNHMIKVGDTVSDMKEGRNAGMWTVGVIL  206 (267)
T ss_dssp             HHHHHHHHHTCC-SGGGEEEEESSHHHHHHHHHTTSEEEEECT
T ss_pred             HHHHHHHHhCCC-CCcCEEEEeCCHHHHHHHHHCCCEEEEEcC
Confidence            777777766653 4 6899999999999999999974 34433

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.10  E-value=2.8e-09  Score=104.37  Aligned_cols=93  Identities=17%  Similarity=0.247  Sum_probs=71.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      ...++||+.++++.++++|   +++.|+|++- ...++.+++..|+.  +++++-                 .+..|...
T Consensus       134 ~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~--~~f~~~-----------------~p~~k~~~  190 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEG---LKIIILSGDK-EDKVKELSKELNIQ--EYYSNL-----------------SPEDKVRI  190 (263)
Confidence            5679999999999999999   9999999984 66788888776652  222211                 13357777


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      ++++...     +.++++||||.+|++++..||+||+++..
T Consensus       191 ~~~l~~~-----~~~~~~VGD~~~D~~aa~~Agv~va~g~~  226 (263)
T 2yj3_A          191 IEKLKQN-----GNKVLMIGDGVNDAAALALADVSVAMGNG  226 (263)
Confidence            7766532     35789999999999999999999988754

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=98.65  E-value=1.1e-07  Score=90.97  Aligned_cols=96  Identities=14%  Similarity=0.049  Sum_probs=70.4

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.++ +|   +++.|+|.+. ...++..++..++..  ..|++.          +         ..+
T Consensus       109 ~~~~~~~~~~~~l~~l~-~~---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~i~~~----------~---------kp~  164 (251)
T 2pke_A          109 HPVEVIAGVREAVAAIA-AD---YAVVLITKGD-LFHQEQKIEQSGLSDLFPRIEVV----------S---------EKD  164 (251)
T ss_dssp             CCCCBCTTHHHHHHHHH-TT---SEEEEEEESC-HHHHHHHHHHHSGGGTCCCEEEE----------S---------CCS
T ss_pred             ccCCcCccHHHHHHHHH-CC---CEEEEEeCCC-HHHHHHHHHHcCcHHhCceeeee----------C---------CCC
Confidence            35788999999999999 88   9999999884 667888887766431  122220          1         113


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~~~  439 (499)
                      ...++.+++..+.+ ..++++||||. +|+.|++.||++++...
T Consensus       165 ~~~~~~~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~  207 (251)
T 2pke_A          165 PQTYARVLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIYTP  207 (251)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEECC
T ss_pred             HHHHHHHHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEEEC
Confidence            45666666665553 57899999999 99999999999766543

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=98.64  E-value=4.3e-07  Score=84.93  Aligned_cols=95  Identities=15%  Similarity=0.100  Sum_probs=65.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ..+.+.||+.++++.++++    .++.|+|.+. ..     ++..|+..  ..+++.           ..   ...+.-|
T Consensus       102 ~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~-----l~~~~l~~~f~~~~~~-----------~~---~~~~kp~  157 (230)
T 3vay_A          102 HQVQIFPEVQPTLEILAKT----FTLGVITNGN-AD-----VRRLGLADYFAFALCA-----------ED---LGIGKPD  157 (230)
T ss_dssp             TCCCBCTTHHHHHHHHHTT----SEEEEEESSC-CC-----GGGSTTGGGCSEEEEH-----------HH---HTCCTTS
T ss_pred             ccCccCcCHHHHHHHHHhC----CeEEEEECCc-hh-----hhhcCcHHHeeeeEEc-----------cc---cCCCCcC
Confidence            3578999999999999864    6899999874 22     44555431  122221           11   1122235


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEEc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVIG  438 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~~  438 (499)
                      ...++.+++..+.+ +.++++|||+. +|+.|++.||++++..
T Consensus       158 ~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v  199 (230)
T 3vay_A          158 PAPFLEALRRAKVD-ASAAVHVGDHPSDDIAGAQQAGMRAIWY  199 (230)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHhCCC-chheEEEeCChHHHHHHHHHCCCEEEEE
Confidence            67777777776663 57899999997 9999999999876653

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.60  E-value=6.1e-07  Score=87.43  Aligned_cols=55  Identities=16%  Similarity=0.342  Sum_probs=45.8

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+..|...++.+++..+.+ ..++++||||.||++|++.|++||++++. +.+++.|
T Consensus       194 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A  249 (279)
T 4dw8_A          194 QGIDKALSLSVLLENIGMT-REEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAA  249 (279)
T ss_dssp             TTCCHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC
T ss_pred             CCCChHHHHHHHHHHcCCC-HHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhC
Confidence            4567999999999887764 57899999999999999999999999874 5565443

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=98.56  E-value=4.8e-06  Score=80.71  Aligned_cols=100  Identities=15%  Similarity=0.128  Sum_probs=70.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ..+.+.||+.++++.+++ +   +++.|+|.+- ...++..++..|+..  ..|++           +.-.   ..+.-+
T Consensus       118 ~~~~~~~g~~~~L~~L~~-~---~~l~i~Tn~~-~~~~~~~l~~~gl~~~f~~i~~-----------~~~~---~~~KP~  178 (260)
T 2gfh_A          118 QHMILADDVKAMLTELRK-E---VRLLLLTNGD-RQTQREKIEACACQSYFDAIVI-----------GGEQ---KEEKPA  178 (260)
T ss_dssp             HTCCCCHHHHHHHHHHHT-T---SEEEEEECSC-HHHHHHHHHHHTCGGGCSEEEE-----------GGGS---SSCTTC
T ss_pred             hcCCCCcCHHHHHHHHHc-C---CcEEEEECcC-hHHHHHHHHhcCHHhhhheEEe-----------cCCC---CCCCCC
Confidence            357899999999999986 6   8999999984 778888888877632  12222           1111   111123


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCc--cEEEc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADI--GIVIG  438 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adi--giv~~  438 (499)
                      ...+...++..+.+ +.++++|||| .+|+.+++.||+  .|.+.
T Consensus       179 p~~~~~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~  222 (260)
T 2gfh_A          179 PSIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWIN  222 (260)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEEC
T ss_pred             HHHHHHHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEc
Confidence            45666666655553 5789999996 999999999998  35554

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.56  E-value=3.2e-07  Score=89.45  Aligned_cols=55  Identities=13%  Similarity=0.276  Sum_probs=42.1

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+.+|...++.+++..+.+ ..++++||||.||++|++.|++||+|++. +.+++.|
T Consensus       194 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A  249 (279)
T 3mpo_A          194 RRASKGGTLSELVDQLGLT-ADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAA  249 (279)
T ss_dssp             SSCCHHHHHHHHHHHTTCC-GGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHC
T ss_pred             CCCChHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhc
Confidence            3567999999999888774 57899999999999999999999999864 5666544

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.49  E-value=1.1e-06  Score=86.21  Aligned_cols=55  Identities=18%  Similarity=0.259  Sum_probs=46.2

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+..|...++.+++..+.+ ..++++||||.||++|++.|++||+|++. +.+++.|
T Consensus       199 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A  254 (290)
T 3dnp_A          199 KGVSKEAGLALVASELGLS-MDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKA  254 (290)
T ss_dssp             TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHS
T ss_pred             CCCCHHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhc
Confidence            3567999999999888774 57899999999999999999999999875 5555544

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=98.47  E-value=2e-06  Score=82.65  Aligned_cols=103  Identities=8%  Similarity=0.025  Sum_probs=66.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.++|.+  . .....|+..|+..  ..|++.+           -.+   .+.-+.
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g---~~i~i~~~~--~-~~~~~L~~~gl~~~Fd~i~~~~-----------~~~---~~KP~p  173 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNN---IKIGLSSAS--K-NAINVLNHLGISDKFDFIADAG-----------KCK---NNKPHP  173 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTT---CEEEECCSC--T-THHHHHHHHTCGGGCSEECCGG-----------GCC---SCTTSS
T ss_pred             ccccchhHHHHHHHHHhcc---ccccccccc--c-hhhhHhhhcccccccceeeccc-----------ccC---CCCCcH
Confidence            4568999999999999999   888776654  3 3456777777632  2222211           000   001122


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCCchH
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSSSSL  443 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~~~L  443 (499)
                      ..+...++..+. .+.+++|||||.+|+.+++.||+ .|.+++...+
T Consensus       174 ~~~~~a~~~lg~-~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~  219 (250)
T 4gib_A          174 EIFLMSAKGLNV-NPQNCIGIEDASAGIDAINSANMFSVGVGNYENL  219 (250)
T ss_dssp             HHHHHHHHHHTC-CGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT
T ss_pred             HHHHHHHHHhCC-ChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh
Confidence            445555555555 35789999999999999999997 5666554433

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=98.47  E-value=3.4e-06  Score=82.10  Aligned_cols=97  Identities=12%  Similarity=0.071  Sum_probs=68.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcC---CCCc--eEEEeeceEeeCCeeeccccccCCChh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASG---DLNA--FRVHSNELVYEESISTGEIVNKLESPL  394 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~---gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~  394 (499)
                      .+.+.||+.++++.++++|   +++.|+|.+ +....+.+|+..   ++..  ..|++           +.      .+ 
T Consensus       128 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~-~~~~~~~~l~~~~~~~l~~~fd~i~~-----------~~------~~-  185 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAG---MKVYIYSSG-SVEAQKLLFGHSTEGDILELVDGHFD-----------TK------IG-  185 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHTBTTBCCGGGCSEEEC-----------GG------GC-
T ss_pred             ccccCcCHHHHHHHHHhCC---CeEEEEeCC-CHHHHHHHHHhhcccChHhhccEEEe-----------cC------CC-
Confidence            5789999999999999999   999999988 466777777753   2321  11221           11      11 


Q ss_pred             hh--HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          395 EK--LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       395 ~K--~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      .|  ...++..++..+.. +.++++|||+.+|+.+++.||+ .|.+..
T Consensus       186 ~KP~p~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~~  232 (261)
T 1yns_A          186 HKVESESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVR  232 (261)
T ss_dssp             CTTCHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             CCCCHHHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence            23  35556666555553 5789999999999999999998 455543

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.47  E-value=7.1e-07  Score=86.40  Aligned_cols=54  Identities=19%  Similarity=0.330  Sum_probs=44.8

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRL  446 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~  446 (499)
                      .+..|...++.+++..+.+ ..++++||||.||++|++.|++||++++. +.+++.
T Consensus       197 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~  251 (274)
T 3fzq_A          197 KDFHKGKAIKRLQERLGVT-QKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDI  251 (274)
T ss_dssp             TTCSHHHHHHHHHHHHTCC-STTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHcCCC-HHHEEEECCChhHHHHHHhcCceEEecCccHHHHHh
Confidence            3557999999999887764 57899999999999999999999999875 455443

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.46  E-value=1.1e-06  Score=83.23  Aligned_cols=95  Identities=9%  Similarity=-0.047  Sum_probs=64.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ....+.||+.++++.++++|    ++.|+|.+. ...++..|+..|+..  .      |+.....         +..|..
T Consensus        93 ~~~~~~~g~~~~l~~l~~~g----~~~i~Tn~~-~~~~~~~l~~~gl~~--~------f~~~~~~---------~~~K~~  150 (231)
T 2p11_A           93 FASRVYPGALNALRHLGARG----PTVILSDGD-VVFQPRKIARSGLWD--E------VEGRVLI---------YIHKEL  150 (231)
T ss_dssp             GGGGBCTTHHHHHHHHHTTS----CEEEEEECC-SSHHHHHHHHTTHHH--H------TTTCEEE---------ESSGGG
T ss_pred             HhCCcCccHHHHHHHHHhCC----CEEEEeCCC-HHHHHHHHHHcCcHH--h------cCeeEEe---------cCChHH
Confidence            46789999999999999876    689999985 668899998877521  0      1110111         123434


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcc---cHHHHHhcCcc-EEEc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPG---DLLCLLEADIG-IVIG  438 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~t---Dl~~l~~Adig-iv~~  438 (499)
                      .++.+...  . .+.++++||||.+   |+.+++.||+. |.+.
T Consensus       151 ~~~~~~~~--~-~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~  191 (231)
T 2p11_A          151 MLDQVMEC--Y-PARHYVMVDDKLRILAAMKKAWGARLTTVFPR  191 (231)
T ss_dssp             CHHHHHHH--S-CCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC
T ss_pred             HHHHHHhc--C-CCceEEEEcCccchhhhhHHHHHcCCeEEEeC
Confidence            44444432  2 2478999999999   88888889873 4443

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=98.45  E-value=1.9e-06  Score=90.58  Aligned_cols=106  Identities=9%  Similarity=-0.007  Sum_probs=67.9

Q ss_pred             HHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccC-----ChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccC
Q 010855          316 WASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCW-----CGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKL  390 (499)
Q Consensus       316 ~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~-----s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~  390 (499)
                      +......+.||+.++++.|+++|   +++.|+|.++     ....+...+....--...|++.+           -.+  
T Consensus        94 ~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~-----------~~~--  157 (555)
T 3i28_A           94 KAISARKINRPMLQAALMLRKKG---FTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC-----------QVG--  157 (555)
T ss_dssp             HHHHHCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH-----------HHT--
T ss_pred             HhHhhcCcChhHHHHHHHHHHCC---CEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEecc-----------ccC--
Confidence            33456899999999999999999   9999999971     12333333221110112333321           110  


Q ss_pred             CChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          391 ESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       391 ~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                       .+.-+...+...++..+.+ ..++++||||.+|+.+++.|++..+...
T Consensus       158 -~~KP~p~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~~  204 (555)
T 3i28_A          158 -MVKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQ  204 (555)
T ss_dssp             -CCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred             -CCCCCHHHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEEEC
Confidence             1111345666666666653 5789999999999999999998555444

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=98.40  E-value=1.2e-06  Score=82.31  Aligned_cols=93  Identities=12%  Similarity=0.072  Sum_probs=62.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh-
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK-  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-  396 (499)
                      .+.+.||+.++++.++++|   +++.|+|.+. . .++..++..|+..  ..+++.+-                .+..| 
T Consensus        93 ~~~~~~~~~~~l~~l~~~g---~~~~i~Tn~~-~-~~~~~l~~~gl~~~f~~~~~~~~----------------~~~~Kp  151 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNG---YKLALVSNAS-P-RVKTLLEKFDLKKYFDALALSYE----------------IKAVKP  151 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTT---CEEEECCSCH-H-HHHHHHHHHTCGGGCSEEC--------------------------
T ss_pred             CceECcCHHHHHHHHHHCC---CEEEEEeCCc-H-HHHHHHHhcCcHhHeeEEEeccc----------------cCCCCC
Confidence            4678999999999999999   9999999873 4 4788888777632  22322110                00112 


Q ss_pred             -HHHHHHHHhhcCCCCCceEEEEcCCcc-cHHHHHhcCccEEE
Q 010855          397 -LQAFNDILKDHSNDEQNLTVYIGGSPG-DLLCLLEADIGIVI  437 (499)
Q Consensus       397 -~~~l~~~~~~~~~~~~~~vIyiGDs~t-Dl~~l~~Adigiv~  437 (499)
                       ...+...++..+..   . ++||||.+ |+.+++.||+..+.
T Consensus       152 ~~~~~~~~~~~~~~~---~-~~vgD~~~~Di~~a~~aG~~~i~  190 (220)
T 2zg6_A          152 NPKIFGFALAKVGYP---A-VHVGDIYELDYIGAKRSYVDPIL  190 (220)
T ss_dssp             -CCHHHHHHHHHCSS---E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred             CHHHHHHHHHHcCCC---e-EEEcCCchHhHHHHHHCCCeEEE
Confidence             12444455544442   2 99999999 99999999985443

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.38  E-value=3.6e-06  Score=80.10  Aligned_cols=101  Identities=6%  Similarity=0.021  Sum_probs=65.3

Q ss_pred             hhHHHHHHHHH-Hc-CCCcccE-----------EEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCC
Q 010855          325 DGCRRFFQNTI-KS-TNFKTDV-----------HVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLE  391 (499)
Q Consensus       325 ~G~~efl~~l~-~~-g~~~~~~-----------~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~  391 (499)
                      +.+.++++.++ +. |   ..+           .+++.+...+.++.+++..+ ..+.++++..       ..++.   .
T Consensus        84 ~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~ei~---~  149 (231)
T 1wr8_A           84 DEEWILWNEIRKRFPN---ARTSYTMPDRRAGLVIMRETINVETVREIINELN-LNLVAVDSGF-------AIHVK---K  149 (231)
T ss_dssp             SHHHHHHHHHHHHCTT---CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT-CSCEEEECSS-------CEEEE---C
T ss_pred             HHHHHHHHHHHHhCCC---ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC-CcEEEEecCc-------EEEEe---c
Confidence            66677777776 44 4   332           44442334567777777653 2233332210       11122   2


Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      .+..|...++.+++..+.+ ..++++||||.||++|++.++++|+++..
T Consensus       150 ~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~~~~  197 (231)
T 1wr8_A          150 PWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKVAVAQA  197 (231)
T ss_dssp             TTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             CCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEecCC
Confidence            3457999999988876653 47899999999999999999999988764

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.38  E-value=9.9e-07  Score=80.74  Aligned_cols=84  Identities=15%  Similarity=0.137  Sum_probs=69.5

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      +++.++++|   +++.|+|++. ...++.+++..|+.   ++++                   ...|...++++++..+.
T Consensus        47 ~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~lgi~---~~~~-------------------~~~k~~~l~~~~~~~~~  100 (176)
T 3mmz_A           47 GIAALRKSG---LTMLILSTEQ-NPVVAARARKLKIP---VLHG-------------------IDRKDLALKQWCEEQGI  100 (176)
T ss_dssp             HHHHHHHTT---CEEEEEESSC-CHHHHHHHHHHTCC---EEES-------------------CSCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CeEEEEECcC-hHHHHHHHHHcCCe---eEeC-------------------CCChHHHHHHHHHHcCC
Confidence            889999999   9999999985 67889999988764   3332                   14688899988887765


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      + ..+++|||||.+|++|+..|+++++++..
T Consensus       101 ~-~~~~~~vGD~~nD~~~~~~ag~~v~~~~~  130 (176)
T 3mmz_A          101 A-PERVLYVGNDVNDLPCFALVGWPVAVASA  130 (176)
T ss_dssp             C-GGGEEEEECSGGGHHHHHHSSEEEECTTC
T ss_pred             C-HHHEEEEcCCHHHHHHHHHCCCeEECCCh
Confidence            3 57899999999999999999999998764

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.36  E-value=1.2e-06  Score=85.98  Aligned_cols=54  Identities=13%  Similarity=0.171  Sum_probs=45.3

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      +.+|...|+.+++..+.+ ..++++||||.||++|++.|++||+|++. +.+++.|
T Consensus       209 ~~~K~~~l~~l~~~lgi~-~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A  263 (283)
T 3dao_A          209 GVSKWTALSYLIDRFDLL-PDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAA  263 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHS
T ss_pred             CCcHHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhc
Confidence            457999999999888774 57899999999999999999999999875 4555443

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=98.35  E-value=3.6e-06  Score=80.61  Aligned_cols=100  Identities=10%  Similarity=0.080  Sum_probs=66.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|.+.   ....+|+..|+..  ..|++.+     .+-.+   ++      ..
T Consensus        93 ~~~~~pg~~~ll~~L~~~g---~~i~i~t~~~---~~~~~l~~~gl~~~fd~i~~~~-----~~~~~---KP------~p  152 (243)
T 4g9b_A           93 VNAVLPGIRSLLADLRAQQ---ISVGLASVSL---NAPTILAALELREFFTFCADAS-----QLKNS---KP------DP  152 (243)
T ss_dssp             GGGBCTTHHHHHHHHHHTT---CEEEECCCCT---THHHHHHHTTCGGGCSEECCGG-----GCSSC---TT------ST
T ss_pred             cccccccHHHHHHhhhccc---ccceeccccc---chhhhhhhhhhccccccccccc-----cccCC---CC------cH
Confidence            3468899999999999999   9999999763   3566777777632  1222211     00001   11      12


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      ..+...++..+.. +.++++||||.+|+.+++.||+ .|.|..+
T Consensus       153 ~~~~~a~~~lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~~g  195 (243)
T 4g9b_A          153 EIFLAACAGLGVP-PQACIGIEDAQAGIDAINASGMRSVGIGAG  195 (243)
T ss_dssp             HHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred             HHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence            3455555555553 5789999999999999999997 5666543

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.35  E-value=2.1e-06  Score=85.25  Aligned_cols=55  Identities=16%  Similarity=0.192  Sum_probs=45.8

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+..|...|+.+++..+.+ ..++++||||.||++|++.|++||+|++. +.+++.|
T Consensus       225 ~~~~K~~al~~l~~~lgi~-~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~A  280 (304)
T 3l7y_A          225 KGLHKGWALQQLLKRWNFT-SDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAA  280 (304)
T ss_dssp             TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHhCcC-HHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhc
Confidence            3557999999999888774 57899999999999999999999999875 4555444

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.30  E-value=1.5e-06  Score=96.94  Aligned_cols=93  Identities=15%  Similarity=0.182  Sum_probs=76.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++||+..+.++.++++|   +++.++|+. .....+.+.++.|++  ++++                 ...+.+|.+.+
T Consensus       553 D~i~~~~~~aI~~L~~~G---i~v~mlTGd-~~~~a~~ia~~lgi~--~v~a-----------------~~~P~~K~~~v  609 (736)
T 3rfu_A          553 DPIKSSTPETILELQQSG---IEIVMLTGD-SKRTAEAVAGTLGIK--KVVA-----------------EIMPEDKSRIV  609 (736)
T ss_dssp             CCBCSSHHHHHHHHHHHT---CEEEEECSS-CHHHHHHHHHHHTCC--CEEC-----------------SCCHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCC--EEEE-----------------ecCHHHHHHHH
Confidence            479999999999999999   999999987 466788888887753  2332                 13457899999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                      +++.+.     +..++++|||.||.+||..||+||+|+...
T Consensus       610 ~~l~~~-----g~~V~~vGDG~ND~paL~~AdvGIAmg~g~  645 (736)
T 3rfu_A          610 SELKDK-----GLIVAMAGDGVNDAPALAKADIGIAMGTGT  645 (736)
T ss_dssp             HHHHHH-----SCCEEEEECSSTTHHHHHHSSEEEEESSSC
T ss_pred             HHHHhc-----CCEEEEEECChHhHHHHHhCCEEEEeCCcc
Confidence            998864     357899999999999999999999998754

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.30  E-value=8.8e-07  Score=82.83  Aligned_cols=90  Identities=12%  Similarity=0.203  Sum_probs=71.0

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      .++.++++|   +++.|+|++- ...++.+++..|+.  .++.+                   ...|...++.+++..+.
T Consensus        60 ~l~~L~~~G---~~~~ivT~~~-~~~~~~~l~~lgi~--~~~~~-------------------~k~k~~~~~~~~~~~~~  114 (195)
T 3n07_A           60 GVKALMNAG---IEIAIITGRR-SQIVENRMKALGIS--LIYQG-------------------QDDKVQAYYDICQKLAI  114 (195)
T ss_dssp             HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHTTCC--EEECS-------------------CSSHHHHHHHHHHHHCC
T ss_pred             HHHHHHHCC---CEEEEEECcC-HHHHHHHHHHcCCc--EEeeC-------------------CCCcHHHHHHHHHHhCC
Confidence            488999999   9999999985 67889999988763  22221                   13588888888887766


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHh
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRR  445 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~  445 (499)
                      + ..+++|||||.||++|+..|++++++++. +.+.+
T Consensus       115 ~-~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~  150 (195)
T 3n07_A          115 A-PEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQ  150 (195)
T ss_dssp             C-GGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHH
T ss_pred             C-HHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHH
Confidence            3 57899999999999999999999999764 34433

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.26  E-value=4.4e-06  Score=79.68  Aligned_cols=117  Identities=13%  Similarity=0.037  Sum_probs=80.0

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEe-e-CC-ee-e---------------
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVY-E-ES-IS-T---------------  383 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~-~-~g-~~-t---------------  383 (499)
                      +.+...+.++.++++|   +.++|+|+. +...++.+++..+++..-|.+|-... + +| .. .               
T Consensus        23 i~~~~~~~l~~l~~~g---~~~~i~TGr-~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~   98 (227)
T 1l6r_A           23 ISTKAIESIRSAEKKG---LTVSLLSGN-VIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK   98 (227)
T ss_dssp             BCHHHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHCC---CEEEEECCC-CcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHH
Confidence            4566778899999999   999999987 46677788877666432344443322 1 22 11 0               


Q ss_pred             ------------------------------------------cc-ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcC
Q 010855          384 ------------------------------------------GE-IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGG  420 (499)
Q Consensus       384 ------------------------------------------G~-~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGD  420 (499)
                                                                +. +..-...+.+|...++.+++..+.+ ..++++|||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~-~~~~~~iGD  177 (227)
T 1l6r_A           99 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE-YDEILVIGD  177 (227)
T ss_dssp             TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC-GGGEEEECC
T ss_pred             HhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcC-HHHEEEECC
Confidence                                                      00 0000133568999999998877663 468999999


Q ss_pred             CcccHHHHHhcCccEEEcCC-chHH
Q 010855          421 SPGDLLCLLEADIGIVIGSS-SSLR  444 (499)
Q Consensus       421 s~tDl~~l~~Adigiv~~~~-~~L~  444 (499)
                      |.||++|+..|++||+++.. +.+.
T Consensus       178 ~~nD~~m~~~ag~~va~~n~~~~~k  202 (227)
T 1l6r_A          178 SNNDMPMFQLPVRKACPANATDNIK  202 (227)
T ss_dssp             SGGGHHHHTSSSEEEECTTSCHHHH
T ss_pred             cHHhHHHHHHcCceEEecCchHHHH
Confidence            99999999999999999764 3444

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.23  E-value=3.1e-06  Score=78.30  Aligned_cols=85  Identities=14%  Similarity=0.209  Sum_probs=69.0

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      +++.++++|   +++.|+|++. ...++.+++..|+.  +++.+                   ...|...++.+++..+.
T Consensus        54 ~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~lgl~--~~f~~-------------------~~~K~~~~~~~~~~~g~  108 (189)
T 3mn1_A           54 GIKMLIASG---VTTAIISGRK-TAIVERRAKSLGIE--HLFQG-------------------REDKLVVLDKLLAELQL  108 (189)
T ss_dssp             HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHHTCS--EEECS-------------------CSCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CEEEEEECcC-hHHHHHHHHHcCCH--HHhcC-------------------cCChHHHHHHHHHHcCC
Confidence            888999999   9999999985 67889999887752  22221                   04688888888887766


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      + +.++++||||.+|++|++.|+++++++..
T Consensus       109 ~-~~~~~~vGD~~nDi~~~~~ag~~~~~~~~  138 (189)
T 3mn1_A          109 G-YEQVAYLGDDLPDLPVIRRVGLGMAVANA  138 (189)
T ss_dssp             C-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             C-hhHEEEECCCHHHHHHHHHCCCeEEeCCc
Confidence            3 57899999999999999999999998764

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.21  E-value=6e-06  Score=73.76  Aligned_cols=91  Identities=11%  Similarity=0.049  Sum_probs=69.6

Q ss_pred             ChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHH
Q 010855          324 QDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDI  403 (499)
Q Consensus       324 r~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~  403 (499)
                      .|+..++++.++++|   ++++|+|++. ...++..++..|+.  .++      ++             +..|...++.+
T Consensus        38 ~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~--~~~------~~-------------~kp~~~~~~~~   92 (162)
T 2p9j_A           38 NVLDGIGIKLLQKMG---ITLAVISGRD-SAPLITRLKELGVE--EIY------TG-------------SYKKLEIYEKI   92 (162)
T ss_dssp             EHHHHHHHHHHHTTT---CEEEEEESCC-CHHHHHHHHHTTCC--EEE------EC-------------C--CHHHHHHH
T ss_pred             cccHHHHHHHHHHCC---CEEEEEeCCC-cHHHHHHHHHcCCH--hhc------cC-------------CCCCHHHHHHH
Confidence            455578999999999   9999999985 67889999887753  222      11             23467777777


Q ss_pred             HhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          404 LKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       404 ~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +...+.+ +.++++|||+.+|+.++..+++++++...
T Consensus        93 ~~~~~~~-~~~~~~vGD~~~Di~~a~~ag~~~~~~~~  128 (162)
T 2p9j_A           93 KEKYSLK-DEEIGFIGDDVVDIEVMKKVGFPVAVRNA  128 (162)
T ss_dssp             HHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             HHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEecCc
Confidence            7766553 57899999999999999999998887643

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.21  E-value=2.7e-06  Score=77.65  Aligned_cols=91  Identities=16%  Similarity=0.159  Sum_probs=68.1

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      .|+.|+++|   +++.|+|+.   ..++.+++.+.+... ++.           |        +.+|...++.+++..+.
T Consensus        44 ~L~~Lk~~G---i~~~I~Tg~---~~~~~~l~~l~lgi~-~~~-----------g--------~~~K~~~l~~~~~~~gi   97 (168)
T 3ewi_A           44 GISLLKKSG---IEVRLISER---ACSKQTLSALKLDCK-TEV-----------S--------VSDKLATVDEWRKEMGL   97 (168)
T ss_dssp             HHHHHHHTT---CEEEEECSS---CCCHHHHHTTCCCCC-EEC-----------S--------CSCHHHHHHHHHHHTTC
T ss_pred             HHHHHHHCC---CEEEEEeCc---HHHHHHHHHhCCCcE-EEE-----------C--------CCChHHHHHHHHHHcCc
Confidence            578889999   999999987   467888884322211 221           1        13699999999988776


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      + +.+++|||||.||++|+..|++++++++. +.+.+.|
T Consensus        98 ~-~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~A  135 (168)
T 3ewi_A           98 C-WKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAV  135 (168)
T ss_dssp             C-GGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTC
T ss_pred             C-hHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhC
Confidence            4 57899999999999999999999998764 4444433

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.20  E-value=1.1e-05  Score=78.89  Aligned_cols=113  Identities=13%  Similarity=0.079  Sum_probs=77.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC---hHHHHHHHHcCCCCc-e--EEEeeceEeeCCeeeccccccCCCh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC---GDLIRSAFASGDLNA-F--RVHSNELVYEESISTGEIVNKLESP  393 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s---~~~I~~~L~~~gl~~-~--~I~aN~l~~~~g~~tG~~~~~~~~g  393 (499)
                      ..++.||+.++++.++++|   ++++|||+.-+   .......|+.+|++. .  +++-     .++            .
T Consensus        99 ~~~~~pG~~ell~~L~~~G---~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lil-----r~~------------~  158 (262)
T 3ocu_A           99 QSRAVPGAVEFNNYVNSHN---GKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYL-----KKD------------K  158 (262)
T ss_dssp             CCEECTTHHHHHHHHHHTT---EEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEE-----ESS------------C
T ss_pred             CCCCCccHHHHHHHHHHCC---CeEEEEeCCCccchHHHHHHHHHHcCcCcccccceec-----cCC------------C
Confidence            5688999999999999999   99999998743   357888888888753 1  2221     111            1


Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhhhhCCcccccc
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~  458 (499)
                      ..|..+++.+...    +...++||||..+|+.+.-... . .-.+...+......+|-+|+-|-
T Consensus       159 ~~K~~~r~~l~~~----Gy~iv~~vGD~~~Dl~~~~~~~-~-~~~r~a~v~~~~~~fG~~~ivlP  217 (262)
T 3ocu_A          159 SAKAARFAEIEKQ----GYEIVLYVGDNLDDFGNTVYGK-L-NADRRAFVDQNQGKFGKTFIMLP  217 (262)
T ss_dssp             SCCHHHHHHHHHT----TEEEEEEEESSGGGGCSTTTTC-C-HHHHHHHHHHTGGGBTTTEEECC
T ss_pred             CChHHHHHHHHhc----CCCEEEEECCChHHhccccccC-C-HHHHHHHHHHHHHHhCCCEEEeC
Confidence            3588887777753    1235669999999998744321 0 11122346667788888888663

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.20  E-value=4.7e-06  Score=76.28  Aligned_cols=87  Identities=21%  Similarity=0.205  Sum_probs=68.7

Q ss_pred             HHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhc
Q 010855          328 RRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDH  407 (499)
Q Consensus       328 ~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~  407 (499)
                      .++++.++++|   ++++|+|++. ...++.+++..|+.  .++.      +             +..|...++++++..
T Consensus        41 ~~~l~~L~~~G---~~~~i~Tg~~-~~~~~~~~~~lgl~--~~~~------~-------------~k~k~~~~~~~~~~~   95 (180)
T 1k1e_A           41 GLGIKMLMDAD---IQVAVLSGRD-SPILRRRIADLGIK--LFFL------G-------------KLEKETACFDLMKQA   95 (180)
T ss_dssp             HHHHHHHHHTT---CEEEEEESCC-CHHHHHHHHHHTCC--EEEE------S-------------CSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCC---CeEEEEeCCC-cHHHHHHHHHcCCc--eeec------C-------------CCCcHHHHHHHHHHc
Confidence            46899999999   9999999985 66888888887753  2221      1             135888888888776


Q ss_pred             CCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          408 SNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       408 ~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +.+ ..++++||||.+|++|+..|+++++++..
T Consensus        96 ~~~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~  127 (180)
T 1k1e_A           96 GVT-AEQTAYIGDDSVDLPAFAACGTSFAVADA  127 (180)
T ss_dssp             TCC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             CCC-HHHEEEECCCHHHHHHHHHcCCeEEeCCc
Confidence            653 47899999999999999999999998754

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.20  E-value=4.7e-06  Score=78.27  Aligned_cols=114  Identities=12%  Similarity=0.104  Sum_probs=75.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC--------------hHHHHHHHHcCCCCceEEEeeceEeeCCeeecc
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--------------GDLIRSAFASGDLNAFRVHSNELVYEESISTGE  385 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--------------~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~  385 (499)
                      ...+.||+.++++.|+++|   +++.|+|.+..              ...++..|+..|+....++...-. .++ ..|.
T Consensus        48 ~~~~~pg~~e~L~~L~~~G---~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~-~~~-~~~~  122 (211)
T 2gmw_A           48 NFEFIDGVIDAMRELKKMG---FALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHH-PQG-SVEE  122 (211)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---CEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCB-TTC-SSGG
T ss_pred             cCcCCcCHHHHHHHHHHCC---CeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcC-CCC-cccc
Confidence            4678999999999999999   99999999842              267888898888753343322110 011 1111


Q ss_pred             ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc--EEEcC
Q 010855          386 IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG--IVIGS  439 (499)
Q Consensus       386 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig--iv~~~  439 (499)
                      .......+.-|...++.+++..+.+ ..++++|||+.+|+.+++.|++.  |.+..
T Consensus       123 ~~~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~  177 (211)
T 2gmw_A          123 FRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRT  177 (211)
T ss_dssp             GBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESS
T ss_pred             cCccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEec
Confidence            1111122223445666666655553 57899999999999999999984  45543

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.19  E-value=3.6e-06  Score=92.66  Aligned_cols=91  Identities=16%  Similarity=0.223  Sum_probs=74.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++||+..+.++.++++|   +++.++|+. .....+.+.++.|++  .++++                 ..+.+|.+.+
T Consensus       456 D~l~~~~~~~i~~L~~~G---i~v~~~TGd-~~~~a~~ia~~lgi~--~~~~~-----------------~~P~~K~~~v  512 (645)
T 3j08_A          456 DTLKESAKPAVQELKRMG---IKVGMITGD-NWRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEV  512 (645)
T ss_dssp             CCCTTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHHH
T ss_pred             CCchhHHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCCC--EEEEe-----------------CCHHhHHHHH
Confidence            469999999999999999   999999987 466788888887753  33332                 2345899999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +++...      ..++++|||.||.+|++.||+||++++.
T Consensus       513 ~~l~~~------~~v~~vGDg~ND~~al~~A~vgiamg~g  546 (645)
T 3j08_A          513 KKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG  546 (645)
T ss_dssp             HHHTTT------CCEEEEECSSSCHHHHHHSSEEEEECCC
T ss_pred             HHHhhC------CeEEEEeCCHhHHHHHHhCCEEEEeCCC
Confidence            988753      4689999999999999999999999864

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.19  E-value=2.4e-07  Score=85.72  Aligned_cols=86  Identities=12%  Similarity=-0.083  Sum_probs=58.6

Q ss_pred             hcCCCChhHHHHHHHHHHc-CCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          319 QHLIFQDGCRRFFQNTIKS-TNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~-g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ....+.||+.++++.++++ |   +++.|+|++. ...++..++..|+ ...+           .++             
T Consensus        70 ~~~~~~~g~~e~L~~L~~~~g---~~~~ivT~~~-~~~~~~~l~~~gl-f~~i-----------~~~-------------  120 (193)
T 2i7d_A           70 LDLEPIPGALDAVREMNDLPD---TQVFICTSPL-LKYHHCVGEKYRW-VEQH-----------LGP-------------  120 (193)
T ss_dssp             TTCCBCTTHHHHHHHHHTSTT---EEEEEEECCC-SSCTTTHHHHHHH-HHHH-----------HCH-------------
T ss_pred             ccCccCcCHHHHHHHHHhCCC---CeEEEEeCCC-hhhHHHHHHHhCc-hhhh-----------cCH-------------
Confidence            3568899999999999999 8   9999999984 5566667766543 1111           111             


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCccc----HHHHH-hcCcc-EEEc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGD----LLCLL-EADIG-IVIG  438 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tD----l~~l~-~Adig-iv~~  438 (499)
                      ..    +...+. .+.++++||||.+|    +.++. .|++. |.+.
T Consensus       121 ~~----~~~~~~-~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~  162 (193)
T 2i7d_A          121 QF----VERIIL-TRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFT  162 (193)
T ss_dssp             HH----HTTEEE-CSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEEC
T ss_pred             HH----HHHcCC-CcccEEEECCchhhCcHHHhhcccccccceEEEE
Confidence            02    222222 24678999999999    88888 88863 4443

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.18  E-value=5e-06  Score=76.35  Aligned_cols=97  Identities=7%  Similarity=0.014  Sum_probs=72.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      +...+.||+.++++.++++|   ++++|+|++.....++.+++..|+...  +....               ..+..|..
T Consensus        65 ~~~~~~~g~~e~L~~L~~~G---~~v~ivT~~~~~~~~~~~l~~~gl~~~--f~~~~---------------~~~~~k~~  124 (187)
T 2wm8_A           65 QDVRLYPEVPEVLKRLQSLG---VPGAAASRTSEIEGANQLLELFDLFRY--FVHRE---------------IYPGSKIT  124 (187)
T ss_dssp             CEECCCTTHHHHHHHHHHHT---CCEEEEECCSCHHHHHHHHHHTTCTTT--EEEEE---------------ESSSCHHH
T ss_pred             cccCcchhHHHHHHHHHHCC---ceEEEEeCCCChHHHHHHHHHcCcHhh--cceeE---------------EEeCchHH
Confidence            35689999999999999999   999999988424688999988876421  11000               00124666


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                      .++.+++..+.+ +.++++|||+.+|+.+++.+++.++
T Consensus       125 ~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~i  161 (187)
T 2wm8_A          125 HFERLQQKTGIP-FSQMIFFDDERRNIVDVSKLGVTCI  161 (187)
T ss_dssp             HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred             HHHHHHHHcCCC-hHHEEEEeCCccChHHHHHcCCEEE
Confidence            777777666653 5789999999999999999998544

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=98.18  E-value=2.2e-06  Score=97.61  Aligned_cols=112  Identities=15%  Similarity=0.072  Sum_probs=78.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeC-Ceeecc-cc--------ccC
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEE-SISTGE-IV--------NKL  390 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~-g~~tG~-~~--------~~~  390 (499)
                      -++||+..+.++.|++.|   +++.++|+- ...-...+.++.|+....+-++.+...+ +..++. +.        ...
T Consensus       534 Dp~R~ea~~aI~~l~~aG---I~v~MiTGD-~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~ar  609 (920)
T 1mhs_A          534 DPPRHDTYKTVCEAKTLG---LSIKMLTGD-AVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAE  609 (920)
T ss_dssp             CCCCHHHHHHHHHHHHHT---CEEEEEESS-CHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEES
T ss_pred             ccccccHHHHHHHHhhcC---ceEEEEcCC-CHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEE
Confidence            379999999999999999   999999987 4666777777777632101111111111 011110 10        112


Q ss_pred             CChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          391 ESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       391 ~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                      +++.+|.+.++.+.+.     +..+.++|||.||.+||+.||+||+|+...
T Consensus       610 v~P~~K~~iV~~Lq~~-----g~~Vam~GDGvNDapaLk~AdvGIAmg~gt  655 (920)
T 1mhs_A          610 VFPQHKYNVVEILQQR-----GYLVAMTGDGVNDAPSLKKADTGIAVEGSS  655 (920)
T ss_dssp             CCSTHHHHHHHHHHTT-----TCCCEECCCCGGGHHHHHHSSEEEEETTSC
T ss_pred             eCHHHHHHHHHHHHhC-----CCeEEEEcCCcccHHHHHhCCcCccccccc
Confidence            5667999999998853     356889999999999999999999998654

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.17  E-value=4.8e-06  Score=78.44  Aligned_cols=110  Identities=8%  Similarity=0.010  Sum_probs=74.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCCh---------------HHHHHHHHcCCCCceEEEeeceEeeCCeee
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCG---------------DLIRSAFASGDLNAFRVHSNELVYEESIST  383 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~---------------~~I~~~L~~~gl~~~~I~aN~l~~~~g~~t  383 (499)
                      ....+.||+.++|+.++++|   ++++|+|.+- .               ..++..|+..|+....++...... +|.+.
T Consensus        53 ~~~~~~~g~~e~L~~L~~~G---~~~~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-~g~~~  127 (218)
T 2o2x_A           53 AEIVLRPQMLPAIATANRAG---IPVVVVTNQS-GIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHE-AGVGP  127 (218)
T ss_dssp             GGCCBCGGGHHHHHHHHHHT---CCEEEEEECH-HHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCT-TCCST
T ss_pred             ccCeECcCHHHHHHHHHHCC---CEEEEEcCcC-CCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCC-CCcee
Confidence            34678999999999999999   9999999984 4               578888888876433333221111 11111


Q ss_pred             ccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          384 GEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       384 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                       ........+.-|...++.+++..+.+ ..++++|||+.+|+.+++.+++..
T Consensus       128 -~~~~~~~~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~  177 (218)
T 2o2x_A          128 -LAIPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQ  177 (218)
T ss_dssp             -TCCSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSE
T ss_pred             -ecccCCccCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCE
Confidence             11111222333456677777666653 578999999999999999999854

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.17  E-value=3.5e-06  Score=79.75  Aligned_cols=85  Identities=15%  Similarity=0.257  Sum_probs=69.5

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      +++.|+++|   +++.|+|++- ...++.+++..|+.  .++.+.                   ..|...++.+++..+.
T Consensus        84 ~L~~L~~~G---~~l~I~T~~~-~~~~~~~l~~lgi~--~~f~~~-------------------k~K~~~l~~~~~~lg~  138 (211)
T 3ij5_A           84 GIRCLITSD---IDVAIITGRR-AKLLEDRANTLGIT--HLYQGQ-------------------SDKLVAYHELLATLQC  138 (211)
T ss_dssp             HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHHTCC--EEECSC-------------------SSHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCc--hhhccc-------------------CChHHHHHHHHHHcCc
Confidence            889999999   9999999985 67889999887752  233210                   4688899988887766


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      + +.++++||||.+|++|++.|+++++++..
T Consensus       139 ~-~~~~~~vGDs~nDi~~~~~ag~~~a~~~~  168 (211)
T 3ij5_A          139 Q-PEQVAYIGDDLIDWPVMAQVGLSVAVADA  168 (211)
T ss_dssp             C-GGGEEEEECSGGGHHHHTTSSEEEECTTS
T ss_pred             C-cceEEEEcCCHHHHHHHHHCCCEEEeCCc
Confidence            3 57899999999999999999999998764

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=98.15  E-value=5.2e-06  Score=95.87  Aligned_cols=108  Identities=15%  Similarity=0.034  Sum_probs=78.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccc-------------
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEI-------------  386 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~-------------  386 (499)
                      .-++|||..+.++.|++.|   +++.++|+.- ......+.++.|+....     ...++...+|.-             
T Consensus       601 ~D~lr~~~~~~I~~l~~~G---i~v~miTGD~-~~ta~~ia~~lgi~~~~-----~~i~~~~~~g~~~~~l~~~~~~~~~  671 (995)
T 3ar4_A          601 LDPPRKEVMGSIQLCRDAG---IRVIMITGDN-KGTAIAICRRIGIFGEN-----EEVADRAYTGREFDDLPLAEQREAC  671 (995)
T ss_dssp             ECCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHHTSSCTT-----CCCTTTEEEHHHHHTSCHHHHHHHH
T ss_pred             cCCCchhHHHHHHHHHHcC---CEEEEECCCC-HHHHHHHHHHcCcCCCC-----CcccceEEEchhhhhCCHHHHHHHH
Confidence            3489999999999999999   9999999884 66777787777763210     000112333310             


Q ss_pred             ----cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          387 ----VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       387 ----~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                          ..-.+++.+|.+.++.+.+.     +..+.++|||.||.+||+.||+||+|+...
T Consensus       672 ~~~~v~~r~~P~~K~~~v~~l~~~-----g~~v~~~GDG~ND~~alk~Advgiamg~g~  725 (995)
T 3ar4_A          672 RRACCFARVEPSHKSKIVEYLQSY-----DEITAMTGDGVNDAPALKKAEIGIAMGSGT  725 (995)
T ss_dssp             HHCCEEESCCSSHHHHHHHHHHTT-----TCCEEEEECSGGGHHHHHHSTEEEEETTSC
T ss_pred             hhCcEEEEeCHHHHHHHHHHHHHC-----CCEEEEEcCCchhHHHHHHCCeEEEeCCCC
Confidence                01124567999999998864     357889999999999999999999998543

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=98.15  E-value=1.7e-05  Score=77.11  Aligned_cols=96  Identities=15%  Similarity=0.144  Sum_probs=63.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcC--C---------CC--ceEEEeeceEeeCCeeeccc
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASG--D---------LN--AFRVHSNELVYEESISTGEI  386 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~--g---------l~--~~~I~aN~l~~~~g~~tG~~  386 (499)
                      ...+.||+.++++.    |   +++.|+|.+ +...++..++..  |         +.  ...++..       ..+|  
T Consensus       123 ~~~~~pgv~e~L~~----g---~~l~i~Tn~-~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-------~~~g--  185 (253)
T 2g80_A          123 KAPVYADAIDFIKR----K---KRVFIYSSG-SVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-------NTSG--  185 (253)
T ss_dssp             CBCCCHHHHHHHHH----C---SCEEEECSS-CHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-------HHHC--
T ss_pred             cCCCCCCHHHHHHc----C---CEEEEEeCC-CHHHHHHHHHhhcccccccccccchHhhcceEEee-------eccC--
Confidence            46789999999988    7   899999998 477888888765  3         11  0112111       1111  


Q ss_pred             cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          387 VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       387 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                            +.-....+...++..+.. +.++++||||..|+.+++.||+ .|.+..
T Consensus       186 ------~KP~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          186 ------KKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASR  232 (253)
T ss_dssp             ------CTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred             ------CCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence                  111234555555555553 5789999999999999999998 444543

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.14  E-value=4.8e-06  Score=92.92  Aligned_cols=91  Identities=16%  Similarity=0.223  Sum_probs=74.6

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      -++||+..+.++.++++|   +++.++|+. .....+.+.++.|++  .++++                 ..+.+|.+.+
T Consensus       534 D~~~~~~~~~i~~l~~~G---i~v~~~TGd-~~~~a~~ia~~lgi~--~~~~~-----------------~~P~~K~~~v  590 (723)
T 3j09_A          534 DTLKESAKPAVQELKRMG---IKVGMITGD-NWRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEV  590 (723)
T ss_dssp             CCSCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHHH
T ss_pred             CCcchhHHHHHHHHHHCC---CEEEEECCC-CHHHHHHHHHHcCCc--EEEcc-----------------CCHHHHHHHH
Confidence            479999999999999999   999999986 466788888877753  33332                 2345899999


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +++...      ..++++|||.||.+|++.||+||+++..
T Consensus       591 ~~l~~~------~~v~~vGDg~ND~~al~~A~vgiamg~g  624 (723)
T 3j09_A          591 KKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG  624 (723)
T ss_dssp             HHHTTT------CCEEEEECSSTTHHHHHHSSEEEECCCC
T ss_pred             HHHhcC------CeEEEEECChhhHHHHhhCCEEEEeCCC
Confidence            998753      4688999999999999999999999864

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.14  E-value=2.3e-05  Score=76.36  Aligned_cols=116  Identities=10%  Similarity=0.077  Sum_probs=77.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC---hHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC---GDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s---~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ..++.||+.++++.++++|   ++++|||+.-+   .......|+.+|++...  .+.+.+.+            ....|
T Consensus        99 ~~~~~pg~~ell~~L~~~G---~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~~Lilr~------------~~~~K  161 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANG---GTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--DKTLLLKK------------DKSNK  161 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTT---CEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--TTTEEEES------------SCSSS
T ss_pred             CCCCCccHHHHHHHHHHCC---CeEEEEeCCCccccHHHHHHHHHHcCcCccc--cceeEecC------------CCCCh
Confidence            4688999999999999999   99999998742   35788888888875320  00111111            02468


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhhhhCCcccccc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~  458 (499)
                      ..+++.+...    ....++||||+.+|+.+.-...  -.-.+...+......+|-+|+-|-
T Consensus       162 ~~~r~~L~~~----gy~iv~~iGD~~~Dl~~~~~~~--~~~~r~a~v~~~~~~fG~~~ivlP  217 (260)
T 3pct_A          162 SVRFKQVEDM----GYDIVLFVGDNLNDFGDATYKK--SNAERRDFVAKNSKAFGKKFIVLP  217 (260)
T ss_dssp             HHHHHHHHTT----TCEEEEEEESSGGGGCGGGTTC--CHHHHHHHHHHTGGGBTTTEEECC
T ss_pred             HHHHHHHHhc----CCCEEEEECCChHHcCcccccC--CHHHHHHHHHHHHHHhCCCEEEeC
Confidence            8888887753    1345679999999998743221  011222356677788888888663

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.13  E-value=7.1e-06  Score=80.82  Aligned_cols=92  Identities=16%  Similarity=0.214  Sum_probs=72.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      ...++||+.++++.++++|   +++.|+|++- ...++.+++..|+.  .++..                 ..+..|...
T Consensus       161 ~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~--~~f~~-----------------i~~~~K~~~  217 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMG---IKVGMITGDN-WRSAEAISRELNLD--LVIAE-----------------VLPHQKSEE  217 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHH
T ss_pred             ccccchhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhCCc--eeeee-----------------cChHHHHHH
Confidence            4589999999999999999   9999999984 67888888887752  22211                 112468777


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      ++++...      .++++||||.+|+.|++.||++|+++..
T Consensus       218 ~~~l~~~------~~~~~vGDs~~Di~~a~~ag~~v~~~~~  252 (287)
T 3a1c_A          218 VKKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG  252 (287)
T ss_dssp             HHHHTTT------CCEEEEECTTTCHHHHHHSSEEEEECCC
T ss_pred             HHHHhcC------CeEEEEECCHHHHHHHHHCCeeEEeCCC
Confidence            7776532      5799999999999999999999888653

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.10  E-value=8.7e-06  Score=72.81  Aligned_cols=86  Identities=16%  Similarity=0.139  Sum_probs=68.1

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      .++.++++|   +++.|+|++- ...++.++++.|+.  .++..                   ...|...++.+++..+.
T Consensus        39 ~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~--~~~~~-------------------~kpk~~~~~~~~~~~~~   93 (164)
T 3e8m_A           39 GIFWAHNKG---IPVGILTGEK-TEIVRRRAEKLKVD--YLFQG-------------------VVDKLSAAEELCNELGI   93 (164)
T ss_dssp             HHHHHHHTT---CCEEEECSSC-CHHHHHHHHHTTCS--EEECS-------------------CSCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CEEEEEeCCC-hHHHHHHHHHcCCC--Eeecc-------------------cCChHHHHHHHHHHcCC
Confidence            788999999   9999999884 67889999987753  22221                   13578888888877665


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                      + ..+++|||||.+|+.|++.++++++++...
T Consensus        94 ~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~  124 (164)
T 3e8m_A           94 N-LEQVAYIGDDLNDAKLLKRVGIAGVPASAP  124 (164)
T ss_dssp             C-GGGEEEECCSGGGHHHHTTSSEEECCTTSC
T ss_pred             C-HHHEEEECCCHHHHHHHHHCCCeEEcCChH
Confidence            3 578999999999999999999998886643

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.07  E-value=1.3e-05  Score=72.61  Aligned_cols=107  Identities=14%  Similarity=0.037  Sum_probs=71.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCCh---------------HHHHHHHHcCCCCceEEEeeceEeeCCeeec
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCG---------------DLIRSAFASGDLNAFRVHSNELVYEESISTG  384 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~---------------~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG  384 (499)
                      .+.+.||+.++++.++++|   +++.|+|.+- .               ..++..++..|.....++.......+     
T Consensus        25 ~~~~~~g~~~~l~~L~~~g---~~~~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~-----   95 (179)
T 3l8h_A           25 EWIALPGSLQAIARLTQAD---WTVVLATNQS-GLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDD-----   95 (179)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---CEEEEEEECT-TTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTS-----
T ss_pred             HceECcCHHHHHHHHHHCC---CEEEEEECCC-ccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCC-----
Confidence            4678999999999999999   9999999873 3               45677777776222333321110000     


Q ss_pred             cccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          385 EIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       385 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                          ....+.-+...++..++..+.+ +.++++|||+.+|+.+++.|++ .|.+..+
T Consensus        96 ----~~~~~KP~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g  147 (179)
T 3l8h_A           96 ----GCACRKPLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTG  147 (179)
T ss_dssp             ----CCSSSTTSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCC
Confidence                0111122345666666665553 5789999999999999999997 4555443

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=98.06  E-value=4.9e-06  Score=94.60  Aligned_cols=105  Identities=12%  Similarity=0.087  Sum_probs=77.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeecc-------------c-
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGE-------------I-  386 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~-------------~-  386 (499)
                      -++||+..+.++.|++.|   +++.++|+. .......+.++.|+... ++      ++...+|.             + 
T Consensus       487 Dp~R~~a~~aI~~l~~aG---I~v~MiTGD-~~~tA~~iA~~lGi~~~-~~------~~~~l~g~~~~~~~~~~~l~~~~  555 (885)
T 3b8c_A          487 DPPRHDSAETIRRALNLG---VNVKMITGD-QLAIGKETGRRLGMGTN-MY------PSSALLGTHKDANLASIPVEELI  555 (885)
T ss_dssp             CCCCHHHHHHHHHHHHTT---CCCEEEESS-CHHHHTHHHHTTTCTTC-CS------TTSSCCBGGGGTTSCCSCHHHHH
T ss_pred             cccchhHHHHHHHHHHcC---CcEEEEcCC-ChHHHHHHHHHhCCccc-cC------CcceeeccccccccchhHHHHHH
Confidence            478999999999999999   999999987 36667777777776321 00      01111111             0 


Q ss_pred             ----cccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCc
Q 010855          387 ----VNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSS  441 (499)
Q Consensus       387 ----~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~  441 (499)
                          ....+++.+|.+.++.+.+.     +..+.++|||.||.+||+.||+||+|+...
T Consensus       556 ~~~~v~arv~P~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdvGIAmg~gt  609 (885)
T 3b8c_A          556 EKADGFAGVFPEHKYEIVKKLQER-----KHIVGMTGDGVNDAPALKKADIGIAVADAT  609 (885)
T ss_dssp             HTSCCEECCCHHHHHHHHHHHHHT-----TCCCCBCCCSSTTHHHHHHSSSCCCCSSSH
T ss_pred             hhCcEEEEECHHHHHHHHHHHHHC-----CCeEEEEcCCchhHHHHHhCCEeEEeCCcc
Confidence                01125678999999998863     346779999999999999999999998654

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.05  E-value=4.7e-06  Score=77.33  Aligned_cols=85  Identities=12%  Similarity=0.230  Sum_probs=66.4

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      .++.++++|   +++.|+|++- ...++.+++..|+.  .++..       .            ..|...++.+++..+.
T Consensus        54 ~l~~L~~~g---~~~~ivTn~~-~~~~~~~l~~lgl~--~~~~~-------~------------kpk~~~~~~~~~~~~~  108 (191)
T 3n1u_A           54 GLKLLMAAG---IQVAIITTAQ-NAVVDHRMEQLGIT--HYYKG-------Q------------VDKRSAYQHLKKTLGL  108 (191)
T ss_dssp             HHHHHHHTT---CEEEEECSCC-SHHHHHHHHHHTCC--EEECS-------C------------SSCHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CeEEEEeCcC-hHHHHHHHHHcCCc--cceeC-------C------------CChHHHHHHHHHHhCC
Confidence            588999999   9999999884 67888899887753  22221       0            2467777777776655


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      + +.++++||||.+|++|+..|+++++++..
T Consensus       109 ~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~  138 (191)
T 3n1u_A          109 N-DDEFAYIGDDLPDLPLIQQVGLGVAVSNA  138 (191)
T ss_dssp             C-GGGEEEEECSGGGHHHHHHSSEEEECTTC
T ss_pred             C-HHHEEEECCCHHHHHHHHHCCCEEEeCCc
Confidence            3 57899999999999999999999988764

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=98.01  E-value=1.5e-05  Score=92.15  Aligned_cols=110  Identities=15%  Similarity=0.100  Sum_probs=75.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCce--EEE---e-------eceEee---CCeeecc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAF--RVH---S-------NELVYE---ESISTGE  385 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~--~I~---a-------N~l~~~---~g~~tG~  385 (499)
                      -++||+..+.++.|++.|   +++.++|+- ...-...+.++.|+...  ..+   +       +...-+   ..+.+|.
T Consensus       598 Dplr~~~~~aI~~l~~aG---I~v~miTGD-~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~  673 (1028)
T 2zxe_A          598 DPPRAAVPDAVGKCRSAG---IKVIMVTGD-HPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGS  673 (1028)
T ss_dssp             CCBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHH
T ss_pred             CCCChhHHHHHHHHHHcC---CEEEEECCC-CHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcH
Confidence            489999999999999999   999999987 35666777776665310  000   0       000000   0012221


Q ss_pred             -------------------ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          386 -------------------IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       386 -------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                                         ...-.+++.+|.++++.+.+.     +..+.++|||.||.+||+.||+||+|+.
T Consensus       674 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~V~~iGDG~ND~paLk~AdvGIAmg~  741 (1028)
T 2zxe_A          674 DLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMGI  741 (1028)
T ss_dssp             HHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-----TCCEEEEECSGGGHHHHHHSSEEEEESS
T ss_pred             HhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-----CCEEEEEcCCcchHHHHHhCCceEEeCC
Confidence                               011125678999999988763     3567899999999999999999999983

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.00  E-value=2.9e-05  Score=71.36  Aligned_cols=106  Identities=10%  Similarity=0.116  Sum_probs=73.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC--hHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--GDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      .+.+.||+.++++.|+++|   +++.|+|.+..  ...++..|+..|+..  ..|++..-..          .....+.-
T Consensus        32 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~----------~~~~~~KP   98 (189)
T 3ib6_A           32 EVVLRKNAKETLEKVKQLG---FKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSEL----------QPGKMEKP   98 (189)
T ss_dssp             TCCBCTTHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTS----------STTCCCTT
T ss_pred             CceeCcCHHHHHHHHHHCC---CEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccc----------cccCCCCc
Confidence            4789999999999999999   99999998742  168889999888742  2233321100          00011112


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCcc-EEEcC
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adig-iv~~~  439 (499)
                      +...++..+...+. .+.++++|||+ .+|+.+++.+|+. |.+..
T Consensus        99 ~p~~~~~~~~~~~~-~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~  143 (189)
T 3ib6_A           99 DKTIFDFTLNALQI-DKTEAVMVGNTFESDIIGANRAGIHAIWLQN  143 (189)
T ss_dssp             SHHHHHHHHHHHTC-CGGGEEEEESBTTTTHHHHHHTTCEEEEECC
T ss_pred             CHHHHHHHHHHcCC-CcccEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence            34566666665555 35789999999 7999999999984 54544

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=97.97  E-value=1.2e-05  Score=73.43  Aligned_cols=107  Identities=17%  Similarity=0.185  Sum_probs=68.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccC--------------ChHHHHHHHHcCCCCceEEE-eeceEeeCCeeec
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCW--------------CGDLIRSAFASGDLNAFRVH-SNELVYEESISTG  384 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~--------------s~~~I~~~L~~~gl~~~~I~-aN~l~~~~g~~tG  384 (499)
                      .+.+.||+.++|+.++++|   +++.|+|.+.              ....++.+|+..|+....|+ |-... .+     
T Consensus        40 ~~~~~pg~~e~L~~L~~~G---~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~v~~s~~~~-~~-----  110 (176)
T 2fpr_A           40 KLAFEPGVIPQLLKLQKAG---YKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLP-AD-----  110 (176)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---EEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCG-GG-----
T ss_pred             HCcCCccHHHHHHHHHHCC---CEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeEEEEcCCCC-cc-----
Confidence            4678999999999999999   9999999971              15678888888887533332 20000 00     


Q ss_pred             cccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          385 EIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       385 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      ..    ....-+...++.+++..+.+ +.+++||||+.+|+.+++.+++ .|.+...
T Consensus       111 ~~----~~~KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~  162 (176)
T 2fpr_A          111 EC----DCRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE  162 (176)
T ss_dssp             CC----SSSTTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             cc----cccCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence            00    00011222333334333332 5789999999999999999998 4555543

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=97.96  E-value=1.5e-05  Score=73.49  Aligned_cols=85  Identities=15%  Similarity=0.246  Sum_probs=66.7

Q ss_pred             HHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCC
Q 010855          330 FFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSN  409 (499)
Q Consensus       330 fl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~  409 (499)
                      +++.++++|   ++++|+|++- ...++.+++..|+.  .++.+                   +..|...++++++..+.
T Consensus        61 ~l~~L~~~g---~~v~ivT~~~-~~~~~~~l~~lgl~--~~~~~-------------------~kpk~~~~~~~~~~~g~  115 (188)
T 2r8e_A           61 GIRCALTSD---IEVAIITGRK-AKLVEDRCATLGIT--HLYQG-------------------QSNKLIAFSDLLEKLAI  115 (188)
T ss_dssp             HHHHHHTTT---CEEEEECSSC-CHHHHHHHHHHTCC--EEECS-------------------CSCSHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CeEEEEeCCC-hHHHHHHHHHcCCc--eeecC-------------------CCCCHHHHHHHHHHcCC
Confidence            788899999   9999999984 67888888877653  22211                   23577888888876655


Q ss_pred             CCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          410 DEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       410 ~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      + ..+++||||+.+|+.++..++++++++..
T Consensus       116 ~-~~~~~~iGD~~~Di~~a~~ag~~~~~~~~  145 (188)
T 2r8e_A          116 A-PENVAYVGDDLIDWPVMEKVGLSVAVADA  145 (188)
T ss_dssp             C-GGGEEEEESSGGGHHHHTTSSEEEECTTS
T ss_pred             C-HHHEEEECCCHHHHHHHHHCCCEEEecCc
Confidence            3 47899999999999999999999888753

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=97.94  E-value=8e-06  Score=69.98  Aligned_cols=99  Identities=16%  Similarity=0.058  Sum_probs=66.0

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhHHHH
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKLQAF  400 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l  400 (499)
                      +.||+.++++.++++|   +++.|+|.+. ...++..++..++..  ..+++..-          .    .....+...+
T Consensus        19 ~~~~~~~~l~~L~~~G---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~~----------~----~~~Kp~~~~~   80 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNG---VGTVILSNDP-GGLGAAPIRELETNGVVDKVLLSGE----------L----GVEKPEEAAF   80 (137)
T ss_dssp             HHHHHHHHHHHHHHTT---CEEEEEECSC-CGGGGHHHHHHHHTTSSSEEEEHHH----------H----SCCTTSHHHH
T ss_pred             cCccHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHCChHhhccEEEEecc----------C----CCCCCCHHHH
Confidence            3567889999999999   9999999985 556677776654321  23333210          0    0111234456


Q ss_pred             HHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          401 NDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       401 ~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      +..+...+.+ +.++++|||+.+|+.+++.+++ .|.+...
T Consensus        81 ~~~~~~~~~~-~~~~~~vgD~~~di~~a~~~G~~~i~~~~~  120 (137)
T 2pr7_A           81 QAAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVGVYYQQF  120 (137)
T ss_dssp             HHHHHHTTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred             HHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence            6666655553 5689999999999999999997 4444443

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.86  E-value=4.4e-05  Score=88.45  Aligned_cols=109  Identities=17%  Similarity=0.103  Sum_probs=73.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceE------------EEeeceEee---CCeeecc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFR------------VHSNELVYE---ESISTGE  385 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~------------I~aN~l~~~---~g~~tG~  385 (499)
                      -++||+..+.++.|+++|   +++.++|+- ...-...+.++.|+....            +..+...-+   ....+|.
T Consensus       603 Dp~r~~~~~aI~~l~~aG---I~vvmiTGd-~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~  678 (1034)
T 3ixz_A          603 DPPRATVPDAVLKCRTAG---IRVIMVTGD-HPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM  678 (1034)
T ss_pred             CCCchhHHHHHHHHHHcC---CeEEEEeCC-CHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence            479999999999999999   999999986 355667777776652110            000000000   0011111


Q ss_pred             -------------------ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc
Q 010855          386 -------------------IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG  438 (499)
Q Consensus       386 -------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~  438 (499)
                                         .....+++.+|.++++.+...     +..++++|||.||.+||+.||+||+|+
T Consensus       679 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-----g~~V~a~GDG~ND~~mLk~A~vGIAMg  745 (1034)
T 3ixz_A          679 QLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-----GAIVAVTGDGVNDSPALKKADIGVAMG  745 (1034)
T ss_pred             hhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-----CCEEEEECCcHHhHHHHHHCCeeEEeC
Confidence                               011124567899888877653     356789999999999999999999998

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=97.85  E-value=5.7e-06  Score=76.65  Aligned_cols=85  Identities=12%  Similarity=-0.026  Sum_probs=56.2

Q ss_pred             cCCCChhHHHHHHHHHHc-CCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          320 HLIFQDGCRRFFQNTIKS-TNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~-g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      .+.+.||+.++++.++++ |   +++.|+|++. ...++..++..++...                .|.           
T Consensus        73 ~~~~~~g~~e~L~~L~~~~g---~~~~ivT~~~-~~~~~~~l~~~~l~~~----------------~f~-----------  121 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMASLQN---TDVFICTSPI-KMFKYCPYEKYAWVEK----------------YFG-----------  121 (197)
T ss_dssp             TCCBCTTHHHHHHHHHHSTT---EEEEEEECCC-SCCSSHHHHHHHHHHH----------------HHC-----------
T ss_pred             cCCcCcCHHHHHHHHHhcCC---CeEEEEeCCc-cchHHHHHHHhchHHH----------------hch-----------
Confidence            578999999999999999 9   9999999984 4455555554432100                000           


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCccc----HHHHH-hcCc-cEEEc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGD----LLCLL-EADI-GIVIG  438 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tD----l~~l~-~Adi-giv~~  438 (499)
                        ....+..+. .+.++++||||..|    +.++. .|++ .|.+.
T Consensus       122 --~~~~~~l~~-~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~  164 (197)
T 1q92_A          122 --PDFLEQIVL-TRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFT  164 (197)
T ss_dssp             --GGGGGGEEE-CSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEEC
T ss_pred             --HHHHHHhcc-CCccEEEECcccccCCchhhhcccCCCceEEEec
Confidence              011111222 14578999999999    98888 8887 34443

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=97.79  E-value=7.4e-05  Score=72.82  Aligned_cols=44  Identities=14%  Similarity=-0.011  Sum_probs=34.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC--hHHHHHHHHcCCCC
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--GDLIRSAFASGDLN  366 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--~~~I~~~L~~~gl~  366 (499)
                      ...+.||+.++|+.++++|   +++.|+|++-.  ...+...|+..|+.
T Consensus        99 ~~~~~pg~~e~L~~L~~~G---i~i~iaTnr~~~~~~~~~~~L~~~Gl~  144 (258)
T 2i33_A           99 EAEALPGSIDFLKYTESKG---VDIYYISNRKTNQLDATIKNLERVGAP  144 (258)
T ss_dssp             CCEECTTHHHHHHHHHHTT---CEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred             CCCcCccHHHHHHHHHHCC---CEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence            4678899999999999999   99999999731  23566677776764

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=97.68  E-value=7.7e-05  Score=71.09  Aligned_cols=46  Identities=15%  Similarity=0.134  Sum_probs=37.7

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEEcC
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVIGS  439 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~~~  439 (499)
                      +..|...++.+++..+.+ ..++++|||+. ||+.|++.|+++++...
T Consensus       189 ~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~a~~aG~~~~~v~  235 (271)
T 2x4d_A          189 GKPSPEFFKSALQAIGVE-AHQAVMIGDDIVGDVGGAQRCGMRALQVR  235 (271)
T ss_dssp             STTCHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred             cCCCHHHHHHHHHHhCCC-cceEEEECCCcHHHHHHHHHCCCcEEEEc
Confidence            446788888888877763 57899999998 99999999999766543

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=97.51  E-value=0.00012  Score=68.85  Aligned_cols=94  Identities=11%  Similarity=0.120  Sum_probs=52.6

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHH---HHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSA---FASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~---L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      ..||..++++.++++|   +++.|+|++. ...++.+   |..+ ++.  ++++.-    ....+. ..+  .    ...
T Consensus        89 ~~~~~~e~l~~L~~~G---~~l~ivTn~~-~~~~~~~l~~l~~~-f~~--i~~~~~----~~~~~~-~KP--~----p~~  150 (211)
T 2b82_A           89 PKEVARQLIDMHVRRG---DAIFFVTGRS-PTKTETVSKTLADN-FHI--PATNMN----PVIFAG-DKP--G----QNT  150 (211)
T ss_dssp             ECHHHHHHHHHHHHHT---CEEEEEECSC-CCSSCCHHHHHHHH-TTC--CTTTBC----CCEECC-CCT--T----CCC
T ss_pred             CcHHHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHHHHh-cCc--cccccc----hhhhcC-CCC--C----HHH
Confidence            5789999999999999   9999999874 2222222   2221 110  111100    000000 011  1    112


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      +.+.++..+    - +++|||+.+|+.+++.|++. |.+..
T Consensus       151 ~~~~~~~~g----~-~l~VGDs~~Di~aA~~aG~~~i~v~~  186 (211)
T 2b82_A          151 KSQWLQDKN----I-RIFYGDSDNDITAARDVGARGIRILR  186 (211)
T ss_dssp             SHHHHHHTT----E-EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred             HHHHHHHCC----C-EEEEECCHHHHHHHHHCCCeEEEEec
Confidence            233333322    2 88999999999999999984 44433

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.48  E-value=9e-05  Score=72.47  Aligned_cols=55  Identities=18%  Similarity=0.174  Sum_probs=46.5

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGD  448 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~  448 (499)
                      +..|...|+.+++..+.+ ..++++||||.||++|++.|++||+|++. +.+++.|.
T Consensus       207 ~~~K~~al~~l~~~lgi~-~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~  262 (285)
T 3pgv_A          207 GVSKGHALEAVAKMLGYT-LSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHP  262 (285)
T ss_dssp             TCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCT
T ss_pred             CCChHHHHHHHHHHhCCC-HHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCC
Confidence            457999999999888774 57899999999999999999999999974 56665554

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.47  E-value=8.9e-05  Score=71.43  Aligned_cols=55  Identities=15%  Similarity=0.200  Sum_probs=45.8

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+..|...|+.+++..+.+ ..++++||||.||++|++.|++||+|++. +.+++.|
T Consensus       191 ~~~~K~~~l~~l~~~lgi~-~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~A  246 (268)
T 3r4c_A          191 AGTSKATGLSLFADYYRVK-VSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVA  246 (268)
T ss_dssp             TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHcCCC-HHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhc
Confidence            3457999999999988774 57899999999999999999999999874 5555443

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=97.43  E-value=0.0001  Score=70.70  Aligned_cols=54  Identities=15%  Similarity=0.249  Sum_probs=44.9

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRL  446 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~  446 (499)
                      .+.+|...++.+++..+.+ ..++++||||.||++|++.|++||+|++. +.+++.
T Consensus       180 ~~~~K~~~l~~l~~~lgi~-~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~  234 (258)
T 2pq0_A          180 AGGSKAEGIRMMIEKLGID-KKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRV  234 (258)
T ss_dssp             SSCCHHHHHHHHHHHHTCC-GGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHT
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHh
Confidence            4567999999999887764 57899999999999999999999999853 455544

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=97.43  E-value=0.00041  Score=64.36  Aligned_cols=101  Identities=15%  Similarity=0.025  Sum_probs=64.7

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .....+.||+.++++.|+++|   +++.|+|+.- ...+...+. ..  ...|+|.+     ..         ..+.-+.
T Consensus        32 ~~~~~~~pg~~e~L~~L~~~g---~~~~i~T~~~-~~~~~~~~~-~~--~d~v~~~~-----~~---------~~~KP~p   90 (196)
T 2oda_A           32 DEHAQLTPGAQNALKALRDQG---MPCAWIDELP-EALSTPLAA-PV--NDWMIAAP-----RP---------TAGWPQP   90 (196)
T ss_dssp             GGGGSBCTTHHHHHHHHHHHT---CCEEEECCSC-HHHHHHHHT-TT--TTTCEECC-----CC---------SSCTTST
T ss_pred             cccCCcCcCHHHHHHHHHHCC---CEEEEEcCCh-HHHHHHhcC-cc--CCEEEECC-----cC---------CCCCCCh
Confidence            345678899999999999999   9999999764 555544443 11  12233321     11         0111123


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      ..+...+...+.....+++|||||.+|+.+++.|++ .|.+..
T Consensus        91 ~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~  133 (196)
T 2oda_A           91 DACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLAS  133 (196)
T ss_dssp             HHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESS
T ss_pred             HHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEcc
Confidence            445555555554323579999999999999999997 455544

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.16  E-value=0.0036  Score=56.40  Aligned_cols=28  Identities=7%  Similarity=0.084  Sum_probs=24.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEecc
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYC  350 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g  350 (499)
                      +.+.+.||+.++++.+++ +   +++.|+|++
T Consensus        66 ~~~~~~pg~~e~L~~L~~-~---~~~~i~T~~   93 (180)
T 3bwv_A           66 RNLDVMPHAQEVVKQLNE-H---YDIYIATAA   93 (180)
T ss_dssp             GSCCBCTTHHHHHHHHTT-T---SEEEEEECC
T ss_pred             ccCCCCcCHHHHHHHHHh-c---CCEEEEeCC
Confidence            357899999999999987 5   899999986

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=97.13  E-value=0.00019  Score=73.92  Aligned_cols=111  Identities=12%  Similarity=-0.001  Sum_probs=69.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--e--EEEeeceEeeCCeeeccccccC-CChh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--F--RVHSNELVYEESISTGEIVNKL-ESPL  394 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~--~I~aN~l~~~~g~~tG~~~~~~-~~g~  394 (499)
                      .+.+.||+.++++.|+++|   +++.|+|++. ...++..|+.+|+..  .  .|+|.+-....    |.-.+.. ..+.
T Consensus       213 ~~~l~pGv~elL~~Lk~~G---i~laIvTn~~-~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~----~~~~~~~kp~~K  284 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAG---FELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLEA----ENMYPQARPLGK  284 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCGGGSCGGGEECHHHHHHH----HHHSTTSCCCCT
T ss_pred             CCCcCcCHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHcCChHhcCCCEEEeccccccc----ccccccccCCCC
Confidence            5788999999999999999   9999999984 678888898877632  1  35543311100    0000000 0000


Q ss_pred             hhHHHHHHHHhhcC--------------CCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          395 EKLQAFNDILKDHS--------------NDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       395 ~K~~~l~~~~~~~~--------------~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      -+...+...+...+              . .+.++++||||.+|+.+++.||+. |.+..
T Consensus       285 P~P~~~~~a~~~lg~~~~~~~~~~~~~~v-~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~  343 (384)
T 1qyi_A          285 PNPFSYIAALYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLT  343 (384)
T ss_dssp             TSTHHHHHHHHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred             CCHHHHHHHHHHcCCccccccccccccCC-CCcCeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence            11122223333222              2 257899999999999999999984 44443

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.09  E-value=0.00031  Score=67.40  Aligned_cols=47  Identities=21%  Similarity=0.122  Sum_probs=40.4

Q ss_pred             hhhhHHHHHHHHhhcCC-CCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          393 PLEKLQAFNDILKDHSN-DEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~-~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +.+|...++.+++..+. + ..++++||||.||++|++.|++||+|++.
T Consensus       177 g~sKg~al~~l~~~~~~~~-~~~viafGD~~NDi~Ml~~ag~~va~gna  224 (249)
T 2zos_A          177 NSDKGKAAKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDKVFIVGSL  224 (249)
T ss_dssp             SCCHHHHHHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred             CCChHHHHHHHHHHhccCC-CceEEEECCCcccHHHHHhCCcEEEeCCC
Confidence            56899999999877543 3 47899999999999999999999999874

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=96.86  E-value=0.00088  Score=64.90  Aligned_cols=53  Identities=23%  Similarity=0.298  Sum_probs=43.7

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRR  445 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~  445 (499)
                      .+..|...++.+++..+.+ ..++++||||.||++|+..|++||++++. +.+++
T Consensus       188 ~~~~K~~~~~~l~~~l~i~-~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~  241 (271)
T 1rlm_A          188 PGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQ  241 (271)
T ss_dssp             TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHH
Confidence            3557999999998877764 57899999999999999999999999764 44543

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=96.85  E-value=0.00093  Score=65.31  Aligned_cols=53  Identities=23%  Similarity=0.259  Sum_probs=43.6

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRR  445 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~  445 (499)
                      .+.+|...++.+++..+.+ ..++++||||.||++|+..|++||+++.. +.+.+
T Consensus       213 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~  266 (288)
T 1nrw_A          213 RKASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKS  266 (288)
T ss_dssp             TTCSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHh
Confidence            3567999999999887764 57899999999999999999999999764 44443

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=96.83  E-value=0.00087  Score=65.44  Aligned_cols=53  Identities=13%  Similarity=0.230  Sum_probs=43.4

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRR  445 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~  445 (499)
                      .+.+|...++.+++..+.+ ..++++||||.||++|+..|++||+++.. +.+.+
T Consensus       195 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~  248 (282)
T 1rkq_A          195 KRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKE  248 (282)
T ss_dssp             TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHh
Confidence            3557999999998877663 57899999999999999999999999764 44544

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.83  E-value=0.00074  Score=64.43  Aligned_cols=43  Identities=14%  Similarity=0.240  Sum_probs=37.8

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhc--CccEEEcCCc
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEA--DIGIVIGSSS  441 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~A--digiv~~~~~  441 (499)
                      +.+|...++.+++..+      ++++|||.||++|+..|  ++||+|++.+
T Consensus       158 ~~~Kg~al~~l~~~~g------via~GD~~ND~~Ml~~a~~g~~vam~Na~  202 (239)
T 1u02_A          158 GVNKGSAIRSVRGERP------AIIAGDDATDEAAFEANDDALTIKVGEGE  202 (239)
T ss_dssp             TCCHHHHHHHHHTTSC------EEEEESSHHHHHHHHTTTTSEEEEESSSC
T ss_pred             CCCHHHHHHHHHhhCC------eEEEeCCCccHHHHHHhhCCcEEEECCCC
Confidence            4579999999997642      89999999999999999  9999999863

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=96.82  E-value=0.0021  Score=61.46  Aligned_cols=42  Identities=10%  Similarity=0.247  Sum_probs=32.3

Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCcc-EEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adig-iv~~~  439 (499)
                      ...++..++..+.+ +.++++|||+ .+|+.+++.+++. |.+..
T Consensus       186 p~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~  229 (264)
T 1yv9_A          186 AIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTS  229 (264)
T ss_dssp             HHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETT
T ss_pred             HHHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHcCCcEEEECC
Confidence            35777777666653 5789999999 6999999999985 55544

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=96.81  E-value=0.00064  Score=65.36  Aligned_cols=48  Identities=19%  Similarity=0.282  Sum_probs=41.1

Q ss_pred             hhhHHHHHHHHhhcCCCCC--ceEEEEcCCcccHHHHHhcCccEEEcCCch
Q 010855          394 LEKLQAFNDILKDHSNDEQ--NLTVYIGGSPGDLLCLLEADIGIVIGSSSS  442 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~--~~vIyiGDs~tDl~~l~~Adigiv~~~~~~  442 (499)
                      .+|...++.+++..+.+ .  .++++||||.||++|++.|++||+|++...
T Consensus       175 ~~K~~~l~~l~~~~~i~-~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~  224 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDP-EEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP  224 (259)
T ss_dssp             CCHHHHHHHHHHTCSSH-HHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred             CCHHHHHHHHHHHhCCC-CCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence            47999999999877652 3  679999999999999999999999987543

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=96.79  E-value=0.0019  Score=63.87  Aligned_cols=53  Identities=15%  Similarity=0.248  Sum_probs=43.8

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRR  445 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~  445 (499)
                      .+.+|...++.++...+.+ ..++++||||.||++|+..|++||+++.. +.+.+
T Consensus       221 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~  274 (301)
T 2b30_A          221 LGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKS  274 (301)
T ss_dssp             TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHH
T ss_pred             CCCCcHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHh
Confidence            3457999999999887764 57899999999999999999999999864 44543

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=96.75  E-value=0.0012  Score=63.01  Aligned_cols=53  Identities=15%  Similarity=0.162  Sum_probs=44.1

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRL  446 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~  446 (499)
                      +.+|...++.++...+.+ ..+++++|||.||++|+..+++||+++.. +.+.+.
T Consensus       160 ~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~  213 (244)
T 1s2o_A          160 RSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHW  213 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHH
Confidence            457999999999887764 47899999999999999999999999764 456554

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=96.67  E-value=0.0014  Score=62.96  Aligned_cols=48  Identities=21%  Similarity=0.351  Sum_probs=41.4

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      .+..|...++.+++..+.+ ..++++||||.||++|++.|++|+++++.
T Consensus       184 ~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~~n~  231 (261)
T 2rbk_A          184 KGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAMGQA  231 (261)
T ss_dssp             TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             CCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCceEEecCc
Confidence            4568999999998877663 57899999999999999999999999764

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=96.60  E-value=0.0012  Score=63.82  Aligned_cols=52  Identities=15%  Similarity=0.264  Sum_probs=42.8

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRR  445 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~  445 (499)
                      +.+|...++.+++..+.+ ..++++||||.||++|+..|++||+++.. +.+.+
T Consensus       188 ~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~  240 (268)
T 1nf2_A          188 NVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKE  240 (268)
T ss_dssp             TCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHH
T ss_pred             CCChHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHh
Confidence            457999999998877663 57899999999999999999999999764 44543

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=96.54  E-value=0.0083  Score=58.78  Aligned_cols=99  Identities=6%  Similarity=-0.058  Sum_probs=62.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC--hHHHHHHHHc--------CCCCceEEEeeceEeeCCeeecccccc
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC--GDLIRSAFAS--------GDLNAFRVHSNELVYEESISTGEIVNK  389 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s--~~~I~~~L~~--------~gl~~~~I~aN~l~~~~g~~tG~~~~~  389 (499)
                      ...+.||+.++++.++++|   +++.|+|+.-.  ...+..+|+.        +|+....+++..    ++      ..+
T Consensus       186 ~~~~~~g~~e~L~~L~~~g---~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~------~~k  252 (301)
T 1ltq_A          186 TDVINPMVVELSKMYALMG---YQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQRE----QG------DTR  252 (301)
T ss_dssp             GCCBCHHHHHHHHHHHHTT---CEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECC----TT------CCS
T ss_pred             ccCCChHHHHHHHHHHHCC---CeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeecc----CC------CCc
Confidence            4678999999999999999   99999998631  1134556666        676433333211    11      011


Q ss_pred             CCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          390 LESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       390 ~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                       ....-|...++++..    .....++||||+.+|+.+++.|++.++
T Consensus       253 -p~p~~~~~~~~~~~~----~~~~~~~~vgD~~~di~~a~~aG~~~~  294 (301)
T 1ltq_A          253 -KDDVVKEEIFWKHIA----PHFDVKLAIDDRTQVVEMWRRIGVECW  294 (301)
T ss_dssp             -CHHHHHHHHHHHHTT----TTCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred             -HHHHHHHHHHHHHhc----cccceEEEeCCcHHHHHHHHHcCCeEE
Confidence             122334445554421    112346899999999999999998544

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=96.45  E-value=0.0066  Score=63.00  Aligned_cols=96  Identities=6%  Similarity=0.050  Sum_probs=65.4

Q ss_pred             CChhHHHHHHHHHHcCCCcccEEEEeccC-------C-hHH---HHHHHHcCCCCceEEEeeceEeeCCeeeccccccCC
Q 010855          323 FQDGCRRFFQNTIKSTNFKTDVHVLSYCW-------C-GDL---IRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLE  391 (499)
Q Consensus       323 lr~G~~efl~~l~~~g~~~~~~~IVS~g~-------s-~~~---I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~  391 (499)
                      +.||+.++|+.|+++|   +++.|+|.+-       + ..+   ++.+|+..|+....|+|.+     ..         .
T Consensus        88 ~~pgv~e~L~~L~~~G---~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~-----~~---------~  150 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEG---YKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATH-----AG---------L  150 (416)
T ss_dssp             SCTTHHHHHHHHHHTT---CEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECS-----SS---------T
T ss_pred             hcccHHHHHHHHHHCC---CeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECC-----CC---------C
Confidence            7899999999999999   9999999841       1 123   7778888777544444432     00         0


Q ss_pred             ChhhhHHHHHHHHhhcC----CCCCceEEEEcCCc-----------------ccHHHHHhcCccEE
Q 010855          392 SPLEKLQAFNDILKDHS----NDEQNLTVYIGGSP-----------------GDLLCLLEADIGIV  436 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~----~~~~~~vIyiGDs~-----------------tDl~~l~~Adigiv  436 (499)
                      .+.-+...+...+...+    . ...+++||||+.                 +|+.++..|++..+
T Consensus       151 ~~KP~p~~~~~a~~~l~~~~~v-~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~  215 (416)
T 3zvl_A          151 NRKPVSGMWDHLQEQANEGIPI-SVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  215 (416)
T ss_dssp             TSTTSSHHHHHHHHHSSTTCCC-CGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE
T ss_pred             CCCCCHHHHHHHHHHhCCCCCC-CHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc
Confidence            11112245555555544    3 357899999997                 89999999987544

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=96.29  E-value=0.0016  Score=63.42  Aligned_cols=47  Identities=23%  Similarity=0.186  Sum_probs=38.7

Q ss_pred             hhhhHHHHHHHHhhcC-CCCCce--EEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          393 PLEKLQAFNDILKDHS-NDEQNL--TVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~-~~~~~~--vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +.+|...++.+++..+ .+ ..+  +++||||.||++|+..|++||++++.
T Consensus       187 ~~~K~~~l~~l~~~~~~~~-~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~  236 (275)
T 1xvi_A          187 SAGKDQAANWIIATYQQLS-GKRPTTLGLGDGPNDAPLLEVMDYAVIVKGL  236 (275)
T ss_dssp             TCCHHHHHHHHHHHHHHHH-SSCCEEEEEESSGGGHHHHHTSSEEEECCCC
T ss_pred             CCCHHHHHHHHHHHhhhcc-cccCcEEEECCChhhHHHHHhCCceEEecCC
Confidence            4579888888887654 32 345  99999999999999999999999875

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.64  E-value=0.0031  Score=60.05  Aligned_cols=51  Identities=10%  Similarity=0.182  Sum_probs=37.5

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcC----CcccHHHHHhcCc-cEEEcCC-chHHhhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGG----SPGDLLCLLEADI-GIVIGSS-SSLRRLG  447 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGD----s~tDl~~l~~Adi-giv~~~~-~~L~~~~  447 (499)
                      +.+|...|+.+   .+.+ ..+++++||    |.||++|+..|+. |+.|++. +.+++.|
T Consensus       186 ~~~Kg~al~~l---~~i~-~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A  242 (246)
T 2amy_A          186 GWDKRYCLRHV---ENDG-YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICE  242 (246)
T ss_dssp             TCSGGGGGGGT---TTSC-CSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHH
T ss_pred             CCchHHHHHHH---hCCC-HHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHH
Confidence            44688888777   3443 578999999    9999999999987 9999874 5565544

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.60  E-value=0.0087  Score=57.61  Aligned_cols=50  Identities=12%  Similarity=0.262  Sum_probs=38.9

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcC----CcccHHHHHhcCc-cEEEcCC-chHHhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGG----SPGDLLCLLEADI-GIVIGSS-SSLRRL  446 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGD----s~tDl~~l~~Adi-giv~~~~-~~L~~~  446 (499)
                      +.+|...|+.+   .+.+ ..++++|||    |.||++|+..|+. |+.|++. +.+++.
T Consensus       195 ~vsKg~al~~l---~gi~-~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~  250 (262)
T 2fue_A          195 GWDKRYCLDSL---DQDS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRC  250 (262)
T ss_dssp             TCSTTHHHHHH---TTSC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHH
T ss_pred             CCCHHHHHHHH---HCCC-HHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHh
Confidence            45799999988   3443 578999999    9999999999995 9999764 445443

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=95.01  E-value=0.015  Score=53.80  Aligned_cols=45  Identities=16%  Similarity=0.201  Sum_probs=37.2

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCccEEE
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADIGIVI  437 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adigiv~  437 (499)
                      .+..|...++.+++..+.+ ..++++|||| .||+.|++.|+++++.
T Consensus       174 ~~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~~~~aG~~~~~  219 (250)
T 2c4n_A          174 VGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETIL  219 (250)
T ss_dssp             CSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEE
T ss_pred             eCCCCHHHHHHHHHHcCCC-cceEEEECCCchhHHHHHHHcCCeEEE
Confidence            3456788888888877764 5789999999 7999999999998664

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=94.72  E-value=0.03  Score=51.09  Aligned_cols=95  Identities=9%  Similarity=0.105  Sum_probs=60.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      .+.+|||+.+|++.+.+.    .+++|+|++- ..+++.+++..+...  .+...+ +.+....           .|..+
T Consensus        53 ~v~~rPg~~efL~~l~~~----~~i~I~T~~~-~~~a~~vl~~ld~~~--~f~~~~-~rd~~~~-----------~k~~~  113 (181)
T 2ght_A           53 YVLKRPHVDEFLQRMGEL----FECVLFTASL-AKYADPVADLLDKWG--AFRARL-FRESCVF-----------HRGNY  113 (181)
T ss_dssp             EEEECTTHHHHHHHHHHH----SEEEEECSSC-HHHHHHHHHHHCTTC--CEEEEE-CGGGSEE-----------ETTEE
T ss_pred             EEEeCCCHHHHHHHHHhC----CCEEEEcCCC-HHHHHHHHHHHCCCC--cEEEEE-eccCcee-----------cCCcE
Confidence            468999999999999985    7999999994 789999998766532  222111 1111000           01001


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccE
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGI  435 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigi  435 (499)
                      ++.+ +..+. ...++|+||||..|+.+...+++.|
T Consensus       114 ~k~L-~~Lg~-~~~~~vivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          114 VKDL-SRLGR-DLRRVLILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             ECCG-GGTCS-CGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred             eccH-HHhCC-CcceEEEEeCCHHHhccCcCCEeEe
Confidence            1111 11122 2478999999999999887777543

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=94.72  E-value=0.0091  Score=57.23  Aligned_cols=50  Identities=12%  Similarity=0.058  Sum_probs=38.5

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcC----CcccHHHHHhcC-ccEEEcCCchHHhhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGG----SPGDLLCLLEAD-IGIVIGSSSSLRRLG  447 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGD----s~tDl~~l~~Ad-igiv~~~~~~L~~~~  447 (499)
                      +.+|...|+.+++     ...+++++||    |.||++|++.|+ +|+.|++.....+.|
T Consensus       185 gv~Kg~al~~L~~-----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~  239 (246)
T 3f9r_A          185 GWDKTYCLQFVED-----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEV  239 (246)
T ss_dssp             TCSGGGGGGGTTT-----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHH
T ss_pred             CCCHHHHHHHHHc-----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHH
Confidence            4578888888876     2478999999    599999999987 589988754444333

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=94.70  E-value=0.0065  Score=56.43  Aligned_cols=94  Identities=13%  Similarity=0.126  Sum_probs=60.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      .+.+|||+.+|++.+.+.    .+++|+|++- ..+++.+++..++..  .+...+ +.+.+..           .|..+
T Consensus        66 ~v~~RPgv~efL~~l~~~----~~i~I~Tss~-~~~a~~vl~~ld~~~--~f~~~l-~rd~~~~-----------~k~~~  126 (195)
T 2hhl_A           66 YVLKRPHVDEFLQRMGQL----FECVLFTASL-AKYADPVADLLDRWG--VFRARL-FRESCVF-----------HRGNY  126 (195)
T ss_dssp             EEEECTTHHHHHHHHHHH----SEEEEECSSC-HHHHHHHHHHHCCSS--CEEEEE-CGGGCEE-----------ETTEE
T ss_pred             EEEeCcCHHHHHHHHHcC----CeEEEEcCCC-HHHHHHHHHHhCCcc--cEEEEE-Eccccee-----------cCCce
Confidence            468999999999999985    7999999994 889999998866532  122111 1111100           11111


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      ++.+ +..+. ...++|+|+||..++.+...+++.
T Consensus       127 lK~L-~~Lg~-~~~~~vivDDs~~~~~~~~~ngi~  159 (195)
T 2hhl_A          127 VKDL-SRLGR-ELSKVIIVDNSPASYIFHPENAVP  159 (195)
T ss_dssp             ECCG-GGSSS-CGGGEEEEESCGGGGTTCGGGEEE
T ss_pred             eeeH-hHhCC-ChhHEEEEECCHHHhhhCccCccE
Confidence            1111 11122 247899999999999988888753

>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*

Probab=93.59  E-value=0.73  Score=43.70  Aligned_cols=134  Identities=13%  Similarity=0.079  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHH----------HHHHHHHH-HhCCCCCCCCCCChhhHHHHHHHHHHhcCCcccccccccccchhhhhhh
Q 010855           19 IRKLRKRVKQKL----------KTLDSLVR-EWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKV   87 (499)
Q Consensus        19 ~~~~~~~i~~E~----------~~h~~~~~-~~g~~~~~~~~~~~~~~~Yt~~l~~~a~~~~~~~~~~~~~~~~~~~~~~   87 (499)
                      ...+.+.+.+|+          .+++.+++ .+|++.+. ..|.|+|++|++=|.+..+.++                  
T Consensus        75 ~~eL~~NL~EE~G~~d~~~~H~~lyRr~L~~~lGld~~~-~~p~~sT~~~idt~~~lcs~d~------------------  135 (244)
T 3b5o_A           75 AQELQENIDEEMGSTTGGISHYTLLADGLEEGLGVAVKN-TMPSVATSKLLRTVLSLFDRQV------------------  135 (244)
T ss_dssp             HHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHCCCCTT-CCCCHHHHHHHHHHHHHHTSCH------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCchHHHHHHHHHHhcCCCccc-cCCCchHHHHHHHHHHHhCCCH------------------
Confidence            344566777886          48889999 99999975 6889999999998888864343                  


Q ss_pred             HHHHHHHHHHH------HH-HHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHH
Q 010855           88 AAYTLSAISPC------MR-LFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVI  160 (499)
Q Consensus        88 ~~~~l~Al~PC------~~-~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~  160 (499)
                       ..+++|++.-      +| +|..+-+.+.+..-   +. --..+.+.+..+.=.+=...+.++++.+.   +.++...+
T Consensus       136 -~~aLGA~yatE~iaipe~~ly~~li~gL~~~~~---~~-~~l~FF~~HidelE~~Ha~~l~~~l~~~~---~~eef~~~  207 (244)
T 3b5o_A          136 -DYVLGATYAIEATSIPELTLIVKLVEWLHEGAI---PK-DLQYFFSKHLDEWEIEHEAGLRTSVAAYI---QPEEFGEF  207 (244)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC---CH-HHHHHHHHHHC-------CHHHHHHHTTC---CGGGHHHH
T ss_pred             -HHHHHHHHHHhhhhhhHHHHHHHHHHHHHhCCC---ch-hHHHHHHHHhhhhHHHHHHHHHHHHHHHH---hhHhHHHH
Confidence             4566666422      23 67777777643211   11 11234444432221334556677776654   34668999


Q ss_pred             HHHHHHHHHHHHHhcCCCC
Q 010855          161 KKLYYKAIKLHVNFFAAQP  179 (499)
Q Consensus       161 ~~~F~~a~~lE~~Fw~~a~  179 (499)
                      .+-+++++.....||+.=.
T Consensus       208 ~~G~~~~Lda~~~fWdgL~  226 (244)
T 3b5o_A          208 AAGFRAMIDAMQVWWQELA  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999643

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=92.32  E-value=0.08  Score=50.35  Aligned_cols=46  Identities=11%  Similarity=0.200  Sum_probs=36.4

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCccEEEcC
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adigiv~~~  439 (499)
                      +..|...++.+++..+.+ ..++++|||+ .||+.|++.|++++++..
T Consensus       182 ~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~~~~aG~~~~~v~  228 (266)
T 3pdw_A          182 GKPESIIMEQAMRVLGTD-VSETLMVGDNYATDIMAGINAGMDTLLVH  228 (266)
T ss_dssp             STTSSHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEEC
T ss_pred             CCCCHHHHHHHHHHcCCC-hhhEEEECCCcHHHHHHHHHCCCeEEEEC
Confidence            445667888888777764 5789999999 799999999998655543

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=92.28  E-value=0.072  Score=50.69  Aligned_cols=45  Identities=11%  Similarity=-0.002  Sum_probs=36.2

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCccEEEc
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADIGIVIG  438 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adigiv~~  438 (499)
                      +..|...++.+++..+.+ ..++++|||+ .||+.|++.|++++++.
T Consensus       194 ~kpk~~~~~~~~~~lgi~-~~e~i~iGD~~~nDi~~a~~aG~~~i~v  239 (271)
T 1vjr_A          194 GKPNPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILV  239 (271)
T ss_dssp             STTSTHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCHHHHHHHHHHhCCC-CceEEEECCCcHHHHHHHHHcCCeEEEE
Confidence            345777888888777664 5789999999 59999999999976654

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=91.23  E-value=0.24  Score=46.35  Aligned_cols=45  Identities=20%  Similarity=0.263  Sum_probs=35.7

Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEcC
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~~  439 (499)
                      .-|...++.+++..+.+ +.++++|||+. +|+.|++.|++ .|.+..
T Consensus       179 Kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~  225 (259)
T 2ho4_A          179 KPEKTFFLEALRDADCA-PEEAVMIGDDCRDDVDGAQNIGMLGILVKT  225 (259)
T ss_dssp             TTSHHHHHHHGGGGTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEESS
T ss_pred             CCCHHHHHHHHHHcCCC-hHHEEEECCCcHHHHHHHHHCCCcEEEECC
Confidence            34677888888777764 57899999998 99999999997 455543

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=88.87  E-value=0.35  Score=45.94  Aligned_cols=46  Identities=17%  Similarity=0.255  Sum_probs=35.6

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCc-cEEEcC
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adi-giv~~~  439 (499)
                      +..|...++.+++..+.+ ..++++|||+ .+|+.|+..|++ .|.+..
T Consensus       181 ~Kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~  228 (264)
T 3epr_A          181 GKPNAIIMNKALEILNIP-RNQAVMVGDNYLTDIMAGINNDIDTLLVTT  228 (264)
T ss_dssp             STTSHHHHHHHHHHHTSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETT
T ss_pred             CCCCHHHHHHHHHHhCcC-cccEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence            344566788888777663 5789999999 799999999998 455544

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=88.14  E-value=0.43  Score=45.16  Aligned_cols=46  Identities=9%  Similarity=-0.023  Sum_probs=35.8

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCc-cEEEc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adi-giv~~  438 (499)
                      .+..|...++.+++..+.+ ..++++|||+ .+|+.|+..|++ .|.+.
T Consensus       185 ~~kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~~~~~g~~~~~v~  232 (268)
T 3qgm_A          185 VGKPSEVIMREALDILGLD-AKDVAVVGDQIDVDVAAGKAIGAETVLVL  232 (268)
T ss_dssp             CSTTSHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred             cCCCCHHHHHHHHHHhCCC-chhEEEECCCchHHHHHHHHCCCcEEEEC
Confidence            3445668888888877664 5789999999 699999999997 34444

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=87.32  E-value=0.42  Score=46.51  Aligned_cols=43  Identities=21%  Similarity=0.216  Sum_probs=33.9

Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCccEEE
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIGIVI  437 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adigiv~  437 (499)
                      ..|...++.+++..+.+ +.++++|||+. +|+.|+..|++..++
T Consensus       215 KP~~~~~~~~~~~lgi~-~~e~l~vGD~~~~Di~~a~~aG~~~i~  258 (306)
T 2oyc_A          215 KPSPYMFECITENFSID-PARTLMVGDRLETDILFGHRCGMTTVL  258 (306)
T ss_dssp             TTSTHHHHHHHHHSCCC-GGGEEEEESCTTTHHHHHHHHTCEEEE
T ss_pred             CCCHHHHHHHHHHcCCC-hHHEEEECCCchHHHHHHHHCCCeEEE
Confidence            34556788888777663 57899999996 999999999985443

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=86.10  E-value=1.8  Score=40.88  Aligned_cols=42  Identities=7%  Similarity=0.044  Sum_probs=30.1

Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEcCC
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~~~  440 (499)
                      +...++..++.  . .+.++++|||+. +|+.++..+++ .|.+..+
T Consensus       189 ~~~~~~~~~~~--~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g  232 (263)
T 1zjj_A          189 NEPMYEVVREM--F-PGEELWMVGDRLDTDIAFAKKFGMKAIMVLTG  232 (263)
T ss_dssp             SHHHHHHHHHH--S-TTCEEEEEESCTTTHHHHHHHTTCEEEEESSS
T ss_pred             CHHHHHHHHHh--C-CcccEEEECCChHHHHHHHHHcCCeEEEECCC
Confidence            34555555544  2 357899999995 99999999997 5666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	499
d2f2ga1	215	a.132.1.3 (A:5-219) Seed maturation protein-relate	6e-11
d2a2ma1	231	a.132.1.3 (A:10-240) Hypothetical protein BT3146 {	7e-11
d1udda_	215	a.132.1.3 (A:) Hypothetical transcriptional regula	8e-11
d1wwma1	180	a.132.1.3 (A:11-190) Hypothetical protein TTHA0169	1e-09
d2gm8a1	211	a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon	2e-09
d1rtwa_	206	a.132.1.3 (A:) Putative transcriptional activator	3e-09
d1to9a_	225	a.132.1.3 (A:) Transcriptional activator TenA {Bac	2e-07
d1z72a1	217	a.132.1.3 (A:4-220) Putative transcriptional regul	3e-07

>d2f2ga1 a.132.1.3 (A:5-219) Seed maturation protein-related At3g16990 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 215

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Seed maturation protein-related At3g16990
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 59.8 bits (144), Expect = 6e-11
 Identities = 16/169 (9%), Positives = 51/169 (30%), Gaps = 20/169 (11%)

Query: 7   PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTAS 66
              S +  D   +      +  +++       +W  +    ++   A  +   FL    S
Sbjct: 62  CKDSGESSDMEVVLGGIASLNDEIEWFKREGSKWDVDF-STVVPQRANQEYGRFLEDLMS 120

Query: 67  GKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWI 126
            +V+                     ++A      +++          + +          
Sbjct: 121 SEVK-----------------YPVIMTAFWAIEAVYQESFAHCLE--DGNKTPVELTGAC 161

Query: 127 DYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
             + +  F++     + + ++     +GE L   + +  + ++L V F+
Sbjct: 162 HRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLELEVAFW 210

>d2a2ma1 a.132.1.3 (A:10-240) Hypothetical protein BT3146 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 231

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Hypothetical protein BT3146
species: Bacteroides thetaiotaomicron [TaxId: 818]

 Score = 60.0 bits (145), Expect = 7e-11
 Identities = 18/147 (12%), Positives = 42/147 (28%), Gaps = 26/147 (17%)

Query: 34  DSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLS 93
           ++  + W       +I         D+    A                            
Sbjct: 109 ETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLASPY------------------MCV 150

Query: 94  AISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLT 153
            + PC  L+  IA  +      +    LY+ WI++         A Q   +L++      
Sbjct: 151 VMLPCEYLWPWIANFLDGYTPTN---SLYRFWIEWN--GGTPNGAYQMGNMLEQ---YRD 202

Query: 154 GEELEVIKKLYYKAIKLHVNFFAAQPV 180
             + +   +++  A+   +  F +  +
Sbjct: 203 KIDEDKAVEIFNTAMNYELKVFTSSTI 229

>d1udda_ a.132.1.3 (A:) Hypothetical transcriptional regulator PH1161 {Pyrococcus horikoshii [TaxId: 53953]} Length = 215

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Hypothetical transcriptional regulator PH1161
species: Pyrococcus horikoshii [TaxId: 53953]

 Score = 59.4 bits (143), Expect = 8e-11
 Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 25/170 (14%)

Query: 8   SLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITD--DATVKCTDFLLSTA 65
           S +        I   R  V  +++    L++E    L + I T+         DF+L+TA
Sbjct: 62  SKAEYPLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATA 121

Query: 66  SGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKW 125
                                     L+A+ PC   +  IA+  +  L  D+   +Y++W
Sbjct: 122 YKGN------------------IIEGLTALLPCFWSYAEIAEYHKDKL-RDNPIKIYREW 162

Query: 126 IDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
              Y S  +     +  +++D           + +++++    K  + F+
Sbjct: 163 GKVYLSNEYLNLVGRLRKIIDSSG----HSGYDRLRRIFITGSKFELAFW 208

>d1wwma1 a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 (TT2028) {Thermus thermophilus [TaxId: 274]} Length = 180

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Hypothetical protein TTHA0169 (TT2028)
species: Thermus thermophilus [TaxId: 274]

 Score = 55.7 bits (134), Expect = 1e-09
 Identities = 14/141 (9%), Positives = 27/141 (19%), Gaps = 30/141 (21%)

Query: 35  SLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIKVAAYTLSA 94
             +   G      +            L                           AY +  
Sbjct: 66  DWLLLQGASPSAPV--HPVRAGYIALLEEMGRLPY-------------------AYRVVF 104

Query: 95  ISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTG 154
                 LF            P      + +   ++ +  FQ      E L   L   L  
Sbjct: 105 FYFLNGLFLEAWAHHVPEEGP------WAELSQHWFAPEFQAVLYDLEVLARGLWEDLDP 158

Query: 155 EELEVIKKLYYKAIKLHVNFF 175
           E +        + ++     +
Sbjct: 159 EVVR---TYLRRILEAEKATW 176

>d2gm8a1 a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 211

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: TenA homolog PAE0170
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

 Score = 55.5 bits (133), Expect = 2e-09
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 26/167 (15%)

Query: 11  HDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKC--TDFLLSTASGK 68
             +  K A+      V  ++   ++L++E G  L +    +   V      +L ST + +
Sbjct: 62  SVDLMKTALELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALE 121

Query: 69  VEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDY 128
                                  ++A+ PC   +  IA+     L  +   H+YKKW   
Sbjct: 122 G------------------FYQCMAALLPCFWSYAEIAERHGGKLRENPV-HVYKKWASV 162

Query: 129 YCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
           Y S  ++    +   +LD      +G   E +   + +A    + F+
Sbjct: 163 YLSPEYRGLVERLRAVLDS-----SGLSAEELWPYFKEASLYELEFW 204

>d1rtwa_ a.132.1.3 (A:) Putative transcriptional activator PF1337 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 206

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Putative transcriptional activator PF1337
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 54.8 bits (131), Expect = 3e-09
 Identities = 28/164 (17%), Positives = 63/164 (38%), Gaps = 23/164 (14%)

Query: 12  DEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEG 71
            ++      +    + ++L+  +   +E G  L  EI  D       ++LLS AS     
Sbjct: 62  PDDLLPFFAESIYYISKELEMFEKKAQELGISLNGEI--DWRAKSYVNYLLSVASLGS-- 117

Query: 72  EKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCS 131
                                +A+    + +    K ++  L        Y+++I+++ S
Sbjct: 118 ----------------FLEGFTALYCEEKAYYEAWKWVRENLKER---SPYQEFINHWSS 158

Query: 132 QSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
           Q F E   + E++L+ L+      E E  ++++ +  K  + F+
Sbjct: 159 QEFGEYVKRIEKILNSLAEKHGEFEKERAREVFKEVSKFELIFW 202

>d1to9a_ a.132.1.3 (A:) Transcriptional activator TenA {Bacillus subtilis [TaxId: 1423]} Length = 225

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Transcriptional activator TenA
species: Bacillus subtilis [TaxId: 1423]

 Score = 49.8 bits (118), Expect = 2e-07
 Identities = 24/168 (14%), Positives = 50/168 (29%), Gaps = 23/168 (13%)

Query: 10  SHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKC--TDFLLSTASG 67
                        +   + ++               E      +      T  +  +   
Sbjct: 62  KDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSVLS 121

Query: 68  KVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWID 127
                                A  L+A+ PC  L+  + ++   LL+ D G  +Y+KWI 
Sbjct: 122 GN------------------FAEILAALLPCYWLYYEVGEK---LLHCDPGHPIYQKWIG 160

Query: 128 YYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYKAIKLHVNFF 175
            Y    F++   +     D+L+   T E    +K+ +  +      F+
Sbjct: 161 TYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFW 208

>d1z72a1 a.132.1.3 (A:4-220) Putative transcriptional regulator SP0716 (SPr0628) {Streptococcus pneumoniae [TaxId: 1313]} Length = 217

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Putative transcriptional regulator SP0716 (SPr0628)
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 49.0 bits (116), Expect = 3e-07
 Identities = 14/87 (16%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 89  AYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKL 148
           A+ L  +     L+     +  +        +++ +WI+ +    F E      + L+++
Sbjct: 133 AHLLVMLVIAEGLY----LDWGSKDLALPEVYIHSEWINLHRGPFFAEWVQFLVDELNRV 188

Query: 149 SVLLTGEELEVIKKLYYKAIKLHVNFF 175
                 E+L  +++ + +A+ L + FF
Sbjct: 189 GK--NREDLTELQQRWNQAVALELAFF 213

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	499
d1to9a_	225	Transcriptional activator TenA {Bacillus subtilis	99.95
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	99.94
d1wwma1	180	Hypothetical protein TTHA0169 (TT2028) {Thermus th	99.94
d1rtwa_	206	Putative transcriptional activator PF1337 {Archaeo	99.94
d1udda_	215	Hypothetical transcriptional regulator PH1161 {Pyr	99.94
d2a2ma1	231	Hypothetical protein BT3146 {Bacteroides thetaiota	99.94
d2gm8a1	211	TenA homolog PAE0170 {Archaeon Pyrobaculum aerophi	99.93
d1z72a1	217	Putative transcriptional regulator SP0716 (SPr0628	99.93
d2f2ga1	215	Seed maturation protein-related At3g16990 {Thale c	99.92
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.89
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.86
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.71
d1rcwa_	213	Hypothetical protein CT610 {Chlamydia trachomatis	99.43
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.42
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	98.98
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	98.94
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	98.92
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	98.92
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	98.89
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	98.87
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	98.82
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	98.76
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.74
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	98.74
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.67
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	98.63
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	98.58
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	98.58
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	98.54
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	98.53
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	98.52
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	98.49
d1otva_	254	Coenzyme PQQ synthesis protein C, PqqC {Klebsiella	98.44
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	98.39
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	98.38
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	98.36
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	98.27
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.03
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	98.0
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.94
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.92
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	97.75
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	97.72
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	97.67
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	97.65
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.63
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	97.6
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.56
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.47
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.39
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.38
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.38
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.38
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.09
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	97.07
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	96.96
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.39
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.38
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	95.47
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	88.21
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	85.81
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	85.1
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	84.06
d1wzda1	207	Heme oxygenase HmuO {Corynebacterium diphtheriae [	82.65
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	82.49
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	81.21

>d1to9a_ a.132.1.3 (A:) Transcriptional activator TenA {Bacillus subtilis [TaxId: 1423]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Transcriptional activator TenA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.95  E-value=9.2e-29  Score=236.27  Aligned_cols=153  Identities=16%  Similarity=0.230  Sum_probs=139.2

Q ss_pred             cCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKR-VKQKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~-i~~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++++++.+++..+...+.. +..|+++|+.+++.+|++.++  ..+++|+|.+|++||++++ +|++             
T Consensus        58 ~~ka~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~gi~~~~~~~~~~~p~~~~y~~~l~~~a~~~~~-------------  124 (225)
T d1to9a_          58 AAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSVLSGNF-------------  124 (225)
T ss_dssp             HHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHTTCCH-------------
T ss_pred             HhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhhcCcccccchHHHHHHHHHhcCCH-------------
Confidence            7899999888888777655 458999999999999999864  6789999999999999999 5765             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|.++|+++.....   .+++|++||++|++++|.+.+.++++++|++++.+++++++++++
T Consensus       125 ------~~~l~Al~~ce~~Y~~~~~~~~~~~~---~~~~y~~wi~~~~~~~f~~~~~~~~~~ld~~~~~~~~~~~~~~~~  195 (225)
T d1to9a_         125 ------AEILAALLPCYWLYYEVGEKLLHCDP---GHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKE  195 (225)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHTTTCCC---SSHHHHHHHHHHHSTTTTTHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHhccc---CCchHHHHHHcccCchhHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence                  68999999999999999999876432   678999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCC
Q 010855          163 LYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +|.++|+||++||||||..
T Consensus       196 ~f~~~~~lE~~Fwd~ay~~  214 (225)
T d1to9a_         196 NFVISSYYEYQFWGMAYRK  214 (225)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999874

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=5.8e-28  Score=238.76  Aligned_cols=227  Identities=15%  Similarity=0.222  Sum_probs=168.8

Q ss_pred             CCCceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchh
Q 010855          195 VEGHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAV  274 (499)
Q Consensus       195 ~~~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~  274 (499)
                      ++.+++||+|||||||+.|+.+.++.                     ++|........+++.|++...++..+|.|.+.+
T Consensus        34 g~~klqVisDFD~Tit~~~~~~~~~~---------------------s~~~i~~~~~~~~e~~~~~~~~l~~~y~p~E~d   92 (291)
T d2bdua1          34 GAAKLQIITDFDMTLSRFSYNGKRCP---------------------TCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVD   92 (291)
T ss_dssp             TGGGEEEEECCTTTTBCSEETTEECC---------------------CHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred             ChhhEEEEecCCCcccccccCCcccc---------------------hhHHHHhhCCCCCHHHHHHHHHHHhhhcccccC
Confidence            35899999999999999987542111                     011111122234456677777778888888877


Q ss_pred             hcCCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCcccEEEEeccCC
Q 010855          275 AEFEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWASQ--HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC  352 (499)
Q Consensus       275 ~~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s  352 (499)
                      +..+.+++.+   .|.+||.++++.+.+.    |++++++.+.+.  ++.||||+.+|++.|+++|   +|++|||+|| 
T Consensus        93 ~~~s~~ek~~---~m~ew~~~~~~ll~~~----~l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~---i~~~IvSgG~-  161 (291)
T d2bdua1          93 PVLTVEEKFP---YMVEWYTKSHGLLIEQ----GIPKAKLKEIVADSDVMLKEGYENFFGKLQQHG---IPVFIFSAGI-  161 (291)
T ss_dssp             SSSCHHHHHH---HHHHHHHHHHHHHHHH----CCBGGGHHHHHHHSCCCBCBTHHHHHHHHHHHT---CCEEEEEEEE-
T ss_pred             CCCCHHHHHH---HHHHHHHHHHHHHHHc----CCCHHHHHHHHHhcCCCcccCHHHHHHHHHHcC---CeEEEEcCCh-
Confidence            7788887765   6789999999999765    679999999976  5899999999999999999   9999999999 


Q ss_pred             hHHHHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHH---HhhcCCCCCceEEEEcCCcccHHH
Q 010855          353 GDLIRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDI---LKDHSNDEQNLTVYIGGSPGDLLC  427 (499)
Q Consensus       353 ~~~I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~---~~~~~~~~~~~vIyiGDs~tDl~~  427 (499)
                      .++|++++++.|+.  +++|+||++.|+++..++.+.+++.+..+|...+.+.   .....  .+.++|++|||.||+.|
T Consensus       162 ~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~~~~~~~~~--~~~~vI~iGDs~~Dl~M  239 (291)
T d2bdua1         162 GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLK--DNSNIILLGDSQGDLRM  239 (291)
T ss_dssp             HHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTTHHHHHHTT--TCCEEEEEESSSGGGGT
T ss_pred             HHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhhhHHHHhccC--CcCcEEEEeCCHhHHHH
Confidence            88999999998763  5789999999998777777777666666665444322   22211  25789999999999999


Q ss_pred             HHhc---C--ccEEEcCC---chHHhhhhhhCCccc
Q 010855          428 LLEA---D--IGIVIGSS---SSLRRLGDHFGVSFV  455 (499)
Q Consensus       428 l~~A---d--igiv~~~~---~~L~~~~~~~gi~~~  455 (499)
                      +..+   +  ++|.|...   ..|..|++.+.|.++
T Consensus       240 a~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~  275 (291)
T d2bdua1         240 ADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV  275 (291)
T ss_dssp             TTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEE
T ss_pred             HhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEe
Confidence            9754   2  23444332   467888877766544

>d1wwma1 a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 (TT2028) {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Hypothetical protein TTHA0169 (TT2028)
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=7.8e-28  Score=222.31  Aligned_cols=138  Identities=10%  Similarity=-0.030  Sum_probs=118.5

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHhcCCcccccccccccchhhhhh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTASGKVEGEKVLGKIETPFEKIK   86 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a~~~~~~~~~~~~~~~~~~~~~   86 (499)
                      ++|||+.+ +..+...+..+.+|+.+|+.++.++|      ++++|+|.+||+||++++.+++                 
T Consensus        43 ~~ka~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~------~~~~p~~~~Y~~~l~~~a~~~~-----------------   98 (180)
T d1wwma1          43 LLEAPQAH-RAPLVQALMATVEELDWLLLQGASPS------APVHPVRAGYIALLEEMGRLPY-----------------   98 (180)
T ss_dssp             HHHCCHHH-HHHHHHHHHHHHHHHHHHHTTTCCSS------SCCCHHHHHHHHHHHHHHHSCH-----------------
T ss_pred             HHhCCCHH-HHHHHHHHHHHHHHHHHHHHHHHhcC------CCCChHHHHHHHHHHHHhccCh-----------------
Confidence            78888755 55556666678899999988766655      3577999999999999887664                 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 010855           87 VAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYYK  166 (499)
Q Consensus        87 ~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~F~~  166 (499)
                        +++++||+||+|+|.++|+++.+      .+|||++||++|+||+|++.|.++++++|+++.+.++++   ++++|.+
T Consensus        99 --~~~l~al~pc~~~Y~~~~~~~~~------~~~~y~eWI~~y~~~~F~~~v~~l~~~vd~~~~~~~~~~---~~~~F~~  167 (180)
T d1wwma1          99 --AYRVVFFYFLNGLFLEAWAHHVP------EEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEV---VRTYLRR  167 (180)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHSC------SSSHHHHHHHHHSCTTHHHHHHHHHHHHHHHHTTSCHHH---HHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhcc------cCchHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCCHHH---HHHHHHH
Confidence              68999999999999999998753      568999999999999999999999999999999888765   4567999


Q ss_pred             HHHHHHHhcCCCC
Q 010855          167 AIKLHVNFFAAQP  179 (499)
Q Consensus       167 a~~lE~~Fw~~a~  179 (499)
                      +|+||++||+|++
T Consensus       168 ~~~lE~~FW~m~l  180 (180)
T d1wwma1         168 ILEAEKATWSLLL  180 (180)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhhcC
Confidence            9999999999984

>d1rtwa_ a.132.1.3 (A:) Putative transcriptional activator PF1337 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Putative transcriptional activator PF1337
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.94  E-value=2.9e-27  Score=222.60  Aligned_cols=148  Identities=18%  Similarity=0.196  Sum_probs=134.8

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHh-cCCcccccccccccchhhhh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPFEKI   85 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~~~~   85 (499)
                      ++++||.+ +.++..++..+.+|+++|..+++.+|++.+  ..++|+|.+|++||++++ .|++                
T Consensus        58 ~~~~~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~g~~~~--~~~~p~~~~y~~~l~~~a~~~~~----------------  118 (206)
T d1rtwa_          58 MAKAPDDL-LPFFAESIYYISKELEMFEKKAQELGISLN--GEIDWRAKSYVNYLLSVASLGSF----------------  118 (206)
T ss_dssp             HHHSCGGG-HHHHHHHHHHHHHHHHHHHHHHHHTTCCSS--SCCCHHHHHHHHHHHHHHHHSCH----------------
T ss_pred             HhcCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCccc--cccchhHHHHHHHHHHHHhcCCH----------------
Confidence            67888865 456777788888999999999999999976  468999999999999999 5775                


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 010855           86 KVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYY  165 (499)
Q Consensus        86 ~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~F~  165 (499)
                         +++++||+||+|+|.++|+++.+...   ++++|++||+.|+|++|.+.+.++++++|++++.++++++++++++|+
T Consensus       119 ---~~~~~al~~~e~~Y~~~~~~~~~~~~---~~~~y~~wi~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~F~  192 (206)
T d1rtwa_         119 ---LEGFTALYCEEKAYYEAWKWVRENLK---ERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVFK  192 (206)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHHCS---SCCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHhhccc---cCCcHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence               67999999999999999999887544   678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCC
Q 010855          166 KAIKLHVNFFAAQP  179 (499)
Q Consensus       166 ~a~~lE~~Fw~~a~  179 (499)
                      ++|+||++|||+||
T Consensus       193 ~~~~lE~~Fwd~ay  206 (206)
T d1rtwa_         193 EVSKFELIFWDIAY  206 (206)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999999986

>d1udda_ a.132.1.3 (A:) Hypothetical transcriptional regulator PH1161 {Pyrococcus horikoshii [TaxId: 53953]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Hypothetical transcriptional regulator PH1161
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.94  E-value=5.1e-28  Score=229.37  Aligned_cols=152  Identities=18%  Similarity=0.299  Sum_probs=135.6

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchhh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPFE   83 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~~   83 (499)
                      ++++++.+.+.++...+..+..|+++|..+++.+|++.++  ..+|+|+|.+||+||++++ +|++              
T Consensus        61 ~~ka~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~~~~~--------------  126 (215)
T d1udda_          61 SSKAEYPLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGNI--------------  126 (215)
T ss_dssp             HHHSCTTHHHHHHHHHHHHTTHHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSCH--------------
T ss_pred             HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHhcccCcchhhHHHHHHHHHHHhCCCH--------------
Confidence            6788988888888888888889999999999999999874  6789999999999999999 6886              


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 010855           84 KIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKL  163 (499)
Q Consensus        84 ~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~  163 (499)
                           +++++||+||+|+|.+||+.+.+..... ++++|++||+.|++++|.+.+.++++++|++    +++++++++++
T Consensus       127 -----~~~l~al~~c~~~Y~~~~~~~~~~~~~~-~~~~y~~Wi~~y~~~~f~~~v~~l~~~~d~~----~~~~~~~~~~i  196 (215)
T d1udda_         127 -----IEGLTALLPCFWSYAEIAEYHKDKLRDN-PIKIYREWGKVYLSNEYLNLVGRLRKIIDSS----GHSGYDRLRRI  196 (215)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHTHHHHTTC-SCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS----CSSCHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHHHhcccC-CCcchHHHHHHcCCHHHHHHHHHHHHHHHhC----CHHHHHHHHHH
Confidence                 5799999999999999999987654433 6789999999999999999999999999975    45678899999


Q ss_pred             HHHHHHHHHHhcCCCCCCC
Q 010855          164 YYKAIKLHVNFFAAQPVKQ  182 (499)
Q Consensus       164 F~~a~~lE~~Fw~~a~~~~  182 (499)
                      |.++|+||++|||+||+++
T Consensus       197 F~~~~~lE~~Fwd~ay~~~  215 (215)
T d1udda_         197 FITGSKFELAFWEMAWRGG  215 (215)
T ss_dssp             HHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHcCC
Confidence            9999999999999999764

>d2a2ma1 a.132.1.3 (A:10-240) Hypothetical protein BT3146 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Hypothetical protein BT3146
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.94  E-value=2.4e-27  Score=227.52  Aligned_cols=144  Identities=16%  Similarity=0.291  Sum_probs=127.0

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHh-cCCcccccccccccchhhhh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPFEKI   85 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~~~~   85 (499)
                      ++||+|.+.+.++..+++   .|+++|+.++++||++..+..+++|+|.+|++||+++| +|++                
T Consensus        85 ~aka~~~~~~~~~~~~~~---~e~~l~~~~~~~~gi~~~~~~~~~p~t~aY~~~l~~~a~~~~~----------------  145 (231)
T d2a2ma1          85 ATCAQDETLREFFKAKAK---SYDEYNETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLAS----------------  145 (231)
T ss_dssp             HHTCSSHHHHHHHHHHHH---HHHHHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHHHHSCT----------------
T ss_pred             HHhCCCHHHHHHHHHHHH---HHHHHHHHHHHHcCCChhhcCCCChHHHHHHHHHHHHHhcCCH----------------
Confidence            789999988877655543   58889999999999988777889999999999999999 5876                


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 010855           86 KVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKLYY  165 (499)
Q Consensus        86 ~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~F~  165 (499)
                         +++++||+||+|+|.+||+++.....   ++++|++||++|  ++|.+.+.+++++||+++...+.   ++++++|.
T Consensus       146 ---~~~laallpC~w~Y~~ig~~l~~~~~---~~~~y~~WI~~y--~~f~~~v~~~~~~ld~~~~~~~~---e~~~~iF~  214 (231)
T d2a2ma1         146 ---PYMCVVMLPCEYLWPWIANFLDGYTP---TNSLYRFWIEWN--GGTPNGAYQMGNMLEQYRDKIDE---DKAVEIFN  214 (231)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGSC---TTSTTHHHHHHH--CSCCHHHHHHHHHHHTTGGGSCH---HHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHhcCC---CCCchHHHHHhC--hhHHHHHHHHHHHHHHHhcccCH---HHHHHHHH
Confidence               58999999999999999999986533   789999999999  55999999999999999887764   56889999


Q ss_pred             HHHHHHHHhcCCCCC
Q 010855          166 KAIKLHVNFFAAQPV  180 (499)
Q Consensus       166 ~a~~lE~~Fw~~a~~  180 (499)
                      ++|+||++||+||+.
T Consensus       215 ~~~~lE~~Fwd~A~~  229 (231)
T d2a2ma1         215 TAMNYELKVFTSSTI  229 (231)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999999974

>d2gm8a1 a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: TenA homolog PAE0170
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=99.93  E-value=2.7e-27  Score=223.55  Aligned_cols=153  Identities=20%  Similarity=0.284  Sum_probs=133.7

Q ss_pred             ccc-cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccc
Q 010855            4 FSK-PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKI   78 (499)
Q Consensus         4 ~~~-~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~   78 (499)
                      ++. +++++|.+++..+...+.... .|+.+|+.+++.+|++.++  ..+|+|+|.+|++||++++ ++++         
T Consensus        53 la~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~~~~~---------  123 (211)
T d2gm8a1          53 LSLAASRAPSVDLMKTALELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEGF---------  123 (211)
T ss_dssp             HHHHHHTCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSCH---------
T ss_pred             HHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHhhcCCchhhhhHHHHHHHHHhcCCH---------
Confidence            344 789999999888888775544 8999999999999998764  6789999999999999999 5775         


Q ss_pred             cchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHH
Q 010855           79 ETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELE  158 (499)
Q Consensus        79 ~~~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~  158 (499)
                                +++++||+||+|+|.++|+++.+..... ++++|++||+.|+|++|.+.|.++++++|+..     ++++
T Consensus       124 ----------~~~l~al~~c~~~Y~~~~~~~~~~~~~~-~~~~y~~wi~~~~~~~f~~~v~~l~~~ld~~~-----~~~~  187 (211)
T d2gm8a1         124 ----------YQCMAALLPCFWSYAEIAERHGGKLREN-PVHVYKKWASVYLSPEYRGLVERLRAVLDSSG-----LSAE  187 (211)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGGGGC-CCHHHHHHHHHHHSHHHHHHHHHHHHHHHTSS-----CCHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHHHhhcccc-CCCcHHHHHHHhCCHHHHHHHHHHHHHHhcCh-----hhHH
Confidence                      6799999999999999999987654322 67899999999999999999999999999853     4678


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCC
Q 010855          159 VIKKLYYKAIKLHVNFFAAQPVK  181 (499)
Q Consensus       159 ~~~~~F~~a~~lE~~Fw~~a~~~  181 (499)
                      +|.++|+++|++|++|||+||.+
T Consensus       188 ~~~~~f~~~~~lE~~Fwd~ay~~  210 (211)
T d2gm8a1         188 ELWPYFKEASLYELEFWQAAYEG  210 (211)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcc
Confidence            89999999999999999999874

>d1z72a1 a.132.1.3 (A:4-220) Putative transcriptional regulator SP0716 (SPr0628) {Streptococcus pneumoniae [TaxId: 1313]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Putative transcriptional regulator SP0716 (SPr0628)
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.93  E-value=1.3e-26  Score=219.88  Aligned_cols=148  Identities=18%  Similarity=0.188  Sum_probs=133.1

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCcccccccccccchh
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPF   82 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~   82 (499)
                      ++|+||.+++..+...+..+. .|+++|+.+++.+|++.++  ..+|+|+|.+|++||++++ +|++             
T Consensus        66 ~~ka~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~gi~~~~~~~~~~~p~t~~y~~~l~~~a~~~~~-------------  132 (217)
T d1z72a1          66 VAHADKLESKLRFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSDY-------------  132 (217)
T ss_dssp             HHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHHHHTCH-------------
T ss_pred             HHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhccccCCChHhhHHHHHHHHHHhcCCH-------------
Confidence            789999999888888877665 7999999999999999874  7889999999999999999 6875             


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 010855           83 EKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKK  162 (499)
Q Consensus        83 ~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~  162 (499)
                            +++++||+||+|+|.++|+++...    +.+++|++||+.|++++|.+.+.+++++||+++.  +++++++|++
T Consensus       133 ------~~~l~al~~~~~~Y~~~~~~~~~~----~~~~~y~~wi~~~~~~~f~~~v~~l~~~ld~~~~--~~~~~~~~~~  200 (217)
T d1z72a1         133 ------AHLLVMLVIAEGLYLDWGSKDLAL----PEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGK--NREDLTELQQ  200 (217)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHTCSSCC----CSSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC---CCCHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHhcC----CCCchHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--CHHHHHHHHH
Confidence                  689999999999999999876542    2578999999999999999999999999999985  5678999999


Q ss_pred             HHHHHHHHHHHhcCCCC
Q 010855          163 LYYKAIKLHVNFFAAQP  179 (499)
Q Consensus       163 ~F~~a~~lE~~Fw~~a~  179 (499)
                      +|.++|++|++|||+||
T Consensus       201 ~f~~~~~lE~~Fwd~ay  217 (217)
T d1z72a1         201 RWNQAVALELAFFDIGY  217 (217)
T ss_dssp             HHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHHHHHHhhcC
Confidence            99999999999999997

>d2f2ga1 a.132.1.3 (A:5-219) Seed maturation protein-related At3g16990 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Seed maturation protein-related At3g16990
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=2.4e-25  Score=210.87  Aligned_cols=152  Identities=10%  Similarity=0.101  Sum_probs=129.1

Q ss_pred             cCCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCChhhHHHHHHHHHHh-c-CCcccccccccccc
Q 010855            7 PSLSHDEEDKLAI----RKLRKRVKQKLKTLDSLVREWGFELPEEIITDDATVKCTDFLLSTA-S-GKVEGEKVLGKIET   80 (499)
Q Consensus         7 ~~~a~d~~~~~~~----~~~~~~i~~E~~~h~~~~~~~g~~~~~~~~~~~~~~~Yt~~l~~~a-~-~~~~~~~~~~~~~~   80 (499)
                      ++||+|.+++..+    ........+|+.+|..+++.+|++.+ ..++.|+|.+|++||++++ . |++           
T Consensus        58 ~~ka~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~p~~~~y~~~l~~~~~~~~~~-----------  125 (215)
T d2f2ga1          58 LIRACKDSGESSDMEVVLGGIASLNDEIEWFKREGSKWDVDFS-TVVPQRANQEYGRFLEDLMSSEVKY-----------  125 (215)
T ss_dssp             HHHHHHSCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGG-GCCCCHHHHHHHHHHHHTTSTTSCH-----------
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHH-hcccchHHHHHHHHHHHHHhccCCH-----------
Confidence            4566655444333    33344455799999999999999875 4788999999999999987 4 454           


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHH
Q 010855           81 PFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVI  160 (499)
Q Consensus        81 ~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~  160 (499)
                              +++++||+||+|+|.++|+.+.+...+  .+++|++||++|+|++|.+.|.++++++|++++.++++++++|
T Consensus       126 --------~~~l~al~pc~~~Y~~~~~~~~~~~~~--~~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~  195 (215)
T d2f2ga1         126 --------PVIMTAFWAIEAVYQESFAHCLEDGNK--TPVELTGACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEA  195 (215)
T ss_dssp             --------HHHHHHHHHHHHHHHHHTTTHHHHHHT--SSSCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHhccCc--CcchHHHHHHHhCCccHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence                    689999999999999999998764322  5689999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCC
Q 010855          161 KKLYYKAIKLHVNFFAAQPV  180 (499)
Q Consensus       161 ~~~F~~a~~lE~~Fw~~a~~  180 (499)
                      +++|+++|+||++||||||.
T Consensus       196 ~~~F~~~~~lE~~Fwd~Ay~  215 (215)
T d2f2ga1         196 EDVLVRVLELEVAFWEMSRG  215 (215)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHhhccC
Confidence            99999999999999999973

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.3e-23  Score=196.19  Aligned_cols=145  Identities=12%  Similarity=0.099  Sum_probs=118.6

Q ss_pred             hhccCCCHHHHHHHhh-cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEee-CCe
Q 010855          304 GVLKGLNLEDIKWASQ-HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYE-ESI  381 (499)
Q Consensus       304 ~~f~Gi~~~~l~~~~~-~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~-~g~  381 (499)
                      .+++|...+.++...+ .+.++||+.+++++|+++|   ++++|||+|+ ..+++++++.+|++..+++||++.++ +|.
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~l~pg~~~~i~~lk~~G---~~~~ivS~~~-~~~v~~i~~~lgi~~~~v~an~~~~~~~G~  138 (217)
T d1nnla_          63 ALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERN---VQVFLISGGF-RSIVEHVASKLNIPATNVFANRLKFYFNGE  138 (217)
T ss_dssp             HHHCCCHHHHHHHHHHSCCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCCGGGEEEECEEECTTSC
T ss_pred             HhcccchHHHHHHHHhhccccCHHHHHHHHHHHhCC---CEEEEECCCc-hHHHHHHHHHhCCcccceeeeeeeeeehhc
Confidence            4667866665555554 5779999999999999999   9999999998 78999999999988778999999987 588


Q ss_pred             eecccc-ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhhhhhCCccc
Q 010855          382 STGEIV-NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLGDHFGVSFV  455 (499)
Q Consensus       382 ~tG~~~-~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~  455 (499)
                      +||... .++..+.+|.+.++.+....+   ..++++||||.||++|++.||+||+|++++.+..++++-.|.+.
T Consensus       139 ~~g~~~~~p~~~~~~K~~~v~~~~~~~~---~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~  210 (217)
T d1nnla_         139 YAGFDETQPTAESGGKGKVIKLLKEKFH---FKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT  210 (217)
T ss_dssp             EEEECTTSGGGSTTHHHHHHHHHHHHHC---CSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES
T ss_pred             cccceeeeeeeccchHHHHHHHHHhccC---ccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC
Confidence            888654 345667789999998876543   35799999999999999999999999887767666666555543

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.86  E-value=7.8e-22  Score=185.86  Aligned_cols=195  Identities=14%  Similarity=0.102  Sum_probs=138.5

Q ss_pred             CceEEEEeCCcccccccchHHHHHHHHHhcCCCCCCCccchhhccccccccccHHHHHHHHHHHHHHHHhhhcCcchhhc
Q 010855          197 GHLTLFCDFDWTCTAFDSSSILAELAIVTAQKSDPDQSEGKLTWMSSADLRNTWDVLSTKYTEEYEQCIESIMSSEAVAE  276 (499)
Q Consensus       197 ~~~~ii~DFD~TIT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~  276 (499)
                      +|.+|+||||||||..|++..+++..                       ..+.|..+...|..+.               
T Consensus         3 ~k~lVifD~DGTL~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~~~---------------   44 (226)
T d2feaa1           3 RKPFIICDFDGTITMNDNIINIMKTF-----------------------APPEWMALKDGVLSKT---------------   44 (226)
T ss_dssp             CCEEEEECCTTTTBSSCHHHHHHHHH-----------------------SCTHHHHHHHHHHTTS---------------
T ss_pred             CCeEEEEeCCCCCcCchHHHHHHHHH-----------------------CcchHHHHHHHHHcCc---------------
Confidence            57799999999999999998877642                       2235666655443221               


Q ss_pred             CCHHHHHHHHhhhHHHHHHHHHHHHhhhhccCCCHHHHHHH-hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHH
Q 010855          277 FEYEGLCEALKQLAYFEKNENSRVVQSGVLKGLNLEDIKWA-SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDL  355 (499)
Q Consensus       277 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~Gi~~~~l~~~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~  355 (499)
                      .+.....      .       .++   ..+.+...+.+... ...++++||+.++++.++++|   ++++|+|+|. ..+
T Consensus        45 ~~~~~~~------~-------~~~---~~~~~~~~~~~~~~~~~~~~l~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~  104 (226)
T d2feaa1          45 LSIKEGV------G-------RMF---GLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHE---IPFYVISGGM-DFF  104 (226)
T ss_dssp             SCHHHHH------H-------HHH---TTSBGGGHHHHHHHHHHHCCBCTTHHHHHHHHHHHT---CCEEEEEEEE-HHH
T ss_pred             ccHHHHH------H-------HHH---HHhccccHHHHHHHHHhccchhHHHHHHHHHHHhcc---cccccCCcch-hhh
Confidence            1111110      0       111   23344455555554 457899999999999999999   9999999986 889


Q ss_pred             HHHHHHcCCCCceEEEeeceEeeCCeeec--ccc----ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHH
Q 010855          356 IRSAFASGDLNAFRVHSNELVYEESISTG--EIV----NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLL  429 (499)
Q Consensus       356 I~~~L~~~gl~~~~I~aN~l~~~~g~~tG--~~~----~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~  429 (499)
                      ++.+|+++++ ...++||++.++++..++  ...    .....+.+|..+++++..     .+.+++|||||.+|++|++
T Consensus       105 i~~~l~~l~~-~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~-----~~~~~i~iGDs~~Dl~~a~  178 (226)
T d2feaa1         105 VYPLLEGIVE-KDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSE-----PNQYIIMIGDSVTDVEAAK  178 (226)
T ss_dssp             HHHHHTTTSC-GGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHHHCC-----TTCEEEEEECCGGGHHHHH
T ss_pred             HHHHHHHcCC-ccceeeeeEEEeCCcceeccccccccccccCCHHHHHHHHHHhcC-----CCceEEEEeCchhhHHHHH
Confidence            9999988765 478999999998754332  222    123445666666665543     2478999999999999999


Q ss_pred             hcCccEEEcCCchHHhhhhhhCCcccccc
Q 010855          430 EADIGIVIGSSSSLRRLGDHFGVSFVPLF  458 (499)
Q Consensus       430 ~Adigiv~~~~~~L~~~~~~~gi~~~p~~  458 (499)
                      .||+++++   ..+.++|++.++++.|+.
T Consensus       179 ~A~~~~a~---~~~~~~~~~~~~~~~~~~  204 (226)
T d2feaa1         179 LSDLCFAR---DYLLNECREQNLNHLPYQ  204 (226)
T ss_dssp             TCSEEEEC---HHHHHHHHHTTCCEECCS
T ss_pred             HCCEEEEe---cchHHHHHHcCCCeeecC
Confidence            99965543   358999999999999985

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.71  E-value=1.4e-16  Score=146.12  Aligned_cols=137  Identities=18%  Similarity=0.185  Sum_probs=110.5

Q ss_pred             hhccCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeee
Q 010855          304 GVLKGLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESIST  383 (499)
Q Consensus       304 ~~f~Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~t  383 (499)
                      ..+.+.....+........+.+|..++++.+..+|   ..+.++|+++ ..++...+..++.  ..++++.+..+++..+
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~---~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  130 (210)
T d1j97a_          57 SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRG---YVVAVVSGGF-DIAVNKIKEKLGL--DYAFANRLIVKDGKLT  130 (210)
T ss_dssp             HTTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEE
T ss_pred             HHHhhhHHHHHHHHhhhhhhhhhHHHHHHHHHHcC---CEEEeecccc-cccccchhhccch--hhhhhhhhcccccccc
Confidence            45567777777777788999999999999999999   8999999997 6788888777543  5678888888877766


Q ss_pred             ccccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHhhh
Q 010855          384 GEIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRRLG  447 (499)
Q Consensus       384 G~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~~~  447 (499)
                      +........+..|...+..+....+.. ..++|+||||.||++|+..||+||+|++.+.|.+.|
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~A  193 (210)
T d1j97a_         131 GDVEGEVLKENAKGEILEKIAKIEGIN-LEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKA  193 (210)
T ss_dssp             EEEECSSCSTTHHHHHHHHHHHHHTCC-GGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTC
T ss_pred             ccccccccccccccchhhhHHHHhccc-ccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhC
Confidence            655555667777888888877766553 578999999999999999999999997777776543

>d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia trachomatis [TaxId: 813]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: PqqC-like
domain: Hypothetical protein CT610
species: Chlamydia trachomatis [TaxId: 813]

Probab=99.43  E-value=1.2e-13  Score=128.22  Aligned_cols=150  Identities=12%  Similarity=0.063  Sum_probs=111.0

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHhCCCCCC--CCCCChhhHHHHHHHHHHh-cCCccccccccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK----QKLKTLDSLVREWGFELPE--EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIE   79 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~----~E~~~h~~~~~~~g~~~~~--~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~   79 (499)
                      +++++|.+.+..+...+....    .+..+|..+++.+|++.++  ..++.|+|.+|++||++++ ++++          
T Consensus        56 ~~~~~~~~~~~~l~~~l~~e~~~~~~h~~l~~~~~~~~g~~~~~~~~~~~~p~t~a~~~~~~~~~~~~~~----------  125 (213)
T d1rcwa_          56 HSRCDDLEARKLLLDNLMDEENGYPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWCTGDSL----------  125 (213)
T ss_dssp             HTTCCCHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHTSSCH----------
T ss_pred             HHhccchHHHHHHHHHHHHHhccccchHHHHHHHHHHcCCCHHHHhhhhhhhHHHHHHHHHHHHHccccH----------
Confidence            789999998888877664433    3678999999999999864  6788999999999999999 4664          


Q ss_pred             chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHH
Q 010855           80 TPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEV  159 (499)
Q Consensus        80 ~~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~  159 (499)
                               ..++++++||+|+|..+++.+.+..... ...+...++..+  ..+.+...+-.+.++++....+++++++
T Consensus       126 ---------~~~~a~~~~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~h~~~D~~H~~~~~~l~~~~~~~~~~~  193 (213)
T d1rcwa_         126 ---------AAGVAALYSYESQIPRIAREKIRGLTEY-FGFSNPEDYAYF--TEHEEADVRHAREEKALIEMLLKDDADK  193 (213)
T ss_dssp             ---------HHHHHHHHHHHTTHHHHHHHHHHHHHHH-SCCCSGGGGHHH--HHHHHHHHHHHHHHHHHHHHHCSSCHHH
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcHHHhHHH--HHHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence                     5789999999999999998877532200 001112223332  3344444444455555666667778999


Q ss_pred             HHHHHHHHHHHHHHhcCCC
Q 010855          160 IKKLYYKAIKLHVNFFAAQ  178 (499)
Q Consensus       160 ~~~~F~~a~~lE~~Fw~~a  178 (499)
                      +.++|.+++++|+.|||..
T Consensus       194 ~~~~~~~~~~~~~~f~D~~  212 (213)
T d1rcwa_         194 VLEASQEVTQSLYGFLDSF  212 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999975

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.42  E-value=9.9e-13  Score=119.61  Aligned_cols=123  Identities=19%  Similarity=0.108  Sum_probs=89.2

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeecccc
Q 010855          308 GLNLEDIKWASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIV  387 (499)
Q Consensus       308 Gi~~~~l~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~  387 (499)
                      +....++......+...++...++..++ ++   ....++|+|+ ...+.......+  ....++|.+.+.++...+...
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~s~~~-~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~  127 (206)
T d1rkua_          55 GLKLGDIQEVIATLKPLEGAVEFVDWLR-ER---FQVVILSDTF-YEFSQPLMRQLG--FPTLLCHKLEIDDSDRVVGYQ  127 (206)
T ss_dssp             TCCHHHHHHHHTTCCCCTTHHHHHHHHH-TT---SEEEEEEEEE-HHHHHHHHHHTT--CCCEEEEEEEECTTSCEEEEE
T ss_pred             CCceehhhhhhhhccccchHHHHHHHhh-cC---ceEEEeccCc-hHHHHHHHHHhC--Cchhhcceeeeeccccccccc
Confidence            5577777777778899999999998876 45   7899999998 667777777654  367889998887654433322


Q ss_pred             ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHH
Q 010855          388 NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLR  444 (499)
Q Consensus       388 ~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~  444 (499)
                      .  ..+..+...++.+.-     ...++++||||.||++|++.||+||+|++...++
T Consensus       128 ~--~~~~~~~~~~~~~~i-----~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~  177 (206)
T d1rkua_         128 L--RQKDPKRQSVIAFKS-----LYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVI  177 (206)
T ss_dssp             C--CSSSHHHHHHHHHHH-----TTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHH
T ss_pred             c--cchhhHHHHHHHhcc-----cccceEEecCCccCHHHHHhCCccEEECCCHHHH
Confidence            2  122233333343332     2478999999999999999999999997766665

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.98  E-value=2.2e-09  Score=97.69  Aligned_cols=100  Identities=12%  Similarity=0.054  Sum_probs=70.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      .+.+.||+.++++.++++|   +++.|+|.+. . .+..+|++.|+..  ..|++.+-              .....-|.
T Consensus        80 ~~~~~pgv~~~L~~L~~~g---~~~~v~Sn~~-~-~~~~~l~~~gl~~~f~~i~~s~~--------------~~~~Kp~~  140 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESG---IQQFIYTHKG-N-NAFTILKDLGVESYFTEILTSQS--------------GFVRKPSP  140 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTT---CEEEEECSSC-T-HHHHHHHHHTCGGGEEEEECGGG--------------CCCCTTSS
T ss_pred             cCcccchHHhhhhcccccc---cchhhhcccc-h-hhhhhhhhccccccccccccccc--------------ccccchhH
Confidence            5788999999999999999   9999999874 3 4556888877643  23333211              00111244


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~  439 (499)
                      ..++..++..+.+ +.++++|||+.+|+.+++.+|+. |.+..
T Consensus       141 ~~~~~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~~  182 (204)
T d2go7a1         141 EAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLE  182 (204)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSC
T ss_pred             HHHHHHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEcC
Confidence            5666666665553 57999999999999999999984 44433

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=98.94  E-value=6.5e-09  Score=95.27  Aligned_cols=99  Identities=14%  Similarity=0.043  Sum_probs=72.1

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.|+++|   +++.|+|++- ...++..++..|+..  ..|++.+    +       .   ..+.-+
T Consensus        85 ~~~~~~pg~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~~l~~~F~~i~~~~----~-------~---~~~Kp~  146 (218)
T d1te2a_          85 ETRPLLPGVREAVALCKEQG---LLVGLASASP-LHMLEKVLTMFDLRDSFDALASAE----K-------L---PYSKPH  146 (218)
T ss_dssp             HHCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEECT----T-------S---SCCTTS
T ss_pred             ccccccchHHHHHHHhhhcc---cccccccccc-cccccccccccccccccccccccc----c-------c---ccchhh
Confidence            35678899999999999999   9999999984 778899999888742  3344321    0       0   011123


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                      ...+...++..+.. +.++++|||+.+|+.+++.+|+..+
T Consensus       147 ~~~~~~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i  185 (218)
T d1te2a_         147 PQVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSI  185 (218)
T ss_dssp             THHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEE
Confidence            34556666655553 5789999999999999999997443

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=98.92  E-value=3.2e-09  Score=96.97  Aligned_cols=100  Identities=11%  Similarity=0.079  Sum_probs=71.0

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhh
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLE  395 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~  395 (499)
                      .+++.+.||+.++++.+++ +   +++.|||++. ...++..++.+|+..  ..+++..           -.   ..+.-
T Consensus        78 ~~~~~~~~g~~~~L~~l~~-~---~~~~ivT~~~-~~~~~~~l~~~~l~~~f~~i~~~~-----------~~---~~~KP  138 (207)
T d2hdoa1          78 YDQIELYPGITSLFEQLPS-E---LRLGIVTSQR-RNELESGMRSYPFMMRMAVTISAD-----------DT---PKRKP  138 (207)
T ss_dssp             GGGCEECTTHHHHHHHSCT-T---SEEEEECSSC-HHHHHHHHTTSGGGGGEEEEECGG-----------GS---SCCTT
T ss_pred             ccccccccchhhhhhhhcc-c---cccccccccc-cccccccccccccccccccccccc-----------cc---ccchh
Confidence            3467899999999999974 5   7999999986 789999999887632  1222211           00   11112


Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEE
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVI  437 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~  437 (499)
                      +...++..++..+.+ +.++++||||.+|+.++..+|+..++
T Consensus       139 ~p~~~~~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~  179 (207)
T d2hdoa1         139 DPLPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGL  179 (207)
T ss_dssp             SSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred             hhhhhcccccceeee-ccceeEecCCHHHHHHHHHcCCeEEE
Confidence            445666666666553 57899999999999999999985443

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=98.92  E-value=1.9e-08  Score=91.91  Aligned_cols=101  Identities=6%  Similarity=0.028  Sum_probs=72.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.||+.++++.|+++|   +++.|+|.+ +...++..+++.|+..  ..+++..           ..   ....-|
T Consensus        92 ~~~~l~~~~~~~L~~L~~~g---~~~~i~tn~-~~~~~~~~l~~~gl~~~f~~~~~~~-----------~~---~~~kp~  153 (224)
T d2hsza1          92 NISRLYPNVKETLEALKAQG---YILAVVTNK-PTKHVQPILTAFGIDHLFSEMLGGQ-----------SL---PEIKPH  153 (224)
T ss_dssp             SSCEECTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTCGGGCSEEECTT-----------TS---SSCTTS
T ss_pred             cccchHHHHHHHHHHHhccC---Ccccccccc-cHHHHHHHHHhcCchhhcccccccc-----------cc---cccccc
Confidence            35789999999999999999   999999987 4778999999988742  2233221           00   011123


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                      ...+...+...+.+ ..++++|||+.+|+.+++.+|+ .|.+.
T Consensus       154 p~~~~~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~  195 (224)
T d2hsza1         154 PAPFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLT  195 (224)
T ss_dssp             SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             chhhHHHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEe
Confidence            34455555544443 5789999999999999999997 44443

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.89  E-value=4.6e-08  Score=90.47  Aligned_cols=99  Identities=11%  Similarity=0.071  Sum_probs=69.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.+++++++ +|   ++++|+|.+. ...++..++..|+..  ..|++..-       .|       .+.-+.
T Consensus        98 ~~~~~p~~~~~L~~l~-~~---~~i~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s~~-------~~-------~~KP~~  158 (230)
T d1x42a1          98 YGELYPEVVEVLKSLK-GK---YHVGMITDSD-TEYLMAHLDALGIKDLFDSITTSEE-------AG-------FFKPHP  158 (230)
T ss_dssp             HCCBCTTHHHHHHHHB-TT---BEEEEEESSC-HHHHHHHHHHHTCGGGCSEEEEHHH-------HT-------BCTTSH
T ss_pred             hCcccccHHHHHHHhh-cc---Cceeeeeccc-cccchhhhccccccccccccccccc-------cc-------ccchhh
Confidence            5788999999999996 46   8999999985 778889998877642  23333110       00       111124


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCC-cccHHHHHhcCc-cEEEc
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGS-PGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs-~tDl~~l~~Adi-giv~~  438 (499)
                      ..++..++..+.. +.++++|||+ .+|+.+++.+|+ .|.+.
T Consensus       159 ~~~~~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v~v~  200 (230)
T d1x42a1         159 RIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLD  200 (230)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred             HHHHHHHhhhccc-ccccceeecCcHhHHHHHHHcCCEEEEEC
Confidence            5666666666553 5789999998 589999999997 34443

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.87  E-value=2.1e-08  Score=90.13  Aligned_cols=105  Identities=13%  Similarity=0.133  Sum_probs=69.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      .+..+.||+.++++.++++|   ++++|+|.+ +...+ ..|++.++..  ..|++.+-           .   ....-+
T Consensus        76 ~~~~~~~gv~~~l~~l~~~g---~~~~i~Sn~-~~~~~-~~l~~~~l~~~fd~i~~~~~-----------~---~~~KP~  136 (187)
T d2fi1a1          76 EHPILFEGVSDLLEDISNQG---GRHFLVSHR-NDQVL-EILEKTSIAAYFTEVVTSSS-----------G---FKRKPN  136 (187)
T ss_dssp             TSCCBCTTHHHHHHHHHHTT---CEEEEECSS-CTHHH-HHHHHTTCGGGEEEEECGGG-----------C---CCCTTS
T ss_pred             hcCcccchhHHHHHHHHhhh---ccccccccC-ccchh-hhhhhhcccccccccccccc-----------c---cccCCC
Confidence            46788999999999999999   999999965 45554 5788777642  22322211           0   000011


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc-EEEcCCchHHh
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIGSSSSLRR  445 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~~~~~L~~  445 (499)
                      ...++..++..+.   ..+++|||+.+|+.+++.+|+- |.+.....+.+
T Consensus       137 p~~~~~~~~~~~~---~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~  183 (187)
T d2fi1a1         137 PESMLYLREKYQI---SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQ  183 (187)
T ss_dssp             CHHHHHHHHHTTC---SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHH
T ss_pred             HHHHHHHHHHcCC---CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHh
Confidence            2344555555544   4589999999999999999984 55544444443

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.82  E-value=1.6e-08  Score=93.49  Aligned_cols=103  Identities=14%  Similarity=0.188  Sum_probs=66.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH-
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ-  398 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~-  398 (499)
                      ...+.||+.++++.++++|  ++++.|+|++. ...+...|+..|+...        | +.+.++.   .......+.. 
T Consensus        89 ~~~~~~g~~~~L~~L~~~g--~~~~~v~t~~~-~~~~~~~l~~~gl~~~--------f-d~i~~~~---~~~~~k~~p~~  153 (228)
T d2hcfa1          89 DITLLEGVRELLDALSSRS--DVLLGLLTGNF-EASGRHKLKLPGIDHY--------F-PFGAFAD---DALDRNELPHI  153 (228)
T ss_dssp             GEEECTTHHHHHHHHHTCT--TEEEEEECSSC-HHHHHHHHHTTTCSTT--------C-SCEECTT---TCSSGGGHHHH
T ss_pred             CceecCchHHHHhhhhccc--cccccccCCCc-chhhhhhhhhhccccc--------c-ccccccc---ccccccchhHH
Confidence            4678899999999999875  27899999884 7789999998887421        0 1111111   0111112222 


Q ss_pred             HHHHHHhh--cCCCCCceEEEEcCCcccHHHHHhcCcc-EEEc
Q 010855          399 AFNDILKD--HSNDEQNLTVYIGGSPGDLLCLLEADIG-IVIG  438 (499)
Q Consensus       399 ~l~~~~~~--~~~~~~~~vIyiGDs~tDl~~l~~Adig-iv~~  438 (499)
                      .+......  .+. .+.+++||||+.+|+.++..|++. |.+.
T Consensus       154 ~~~~~~~~~~~~~-~p~~~l~VGD~~~Di~aA~~aG~~~i~v~  195 (228)
T d2hcfa1         154 ALERARRMTGANY-SPSQIVIIGDTEHDIRCARELDARSIAVA  195 (228)
T ss_dssp             HHHHHHHHHCCCC-CGGGEEEEESSHHHHHHHHTTTCEEEEEC
T ss_pred             HHHHhhhhcccCC-ChhHheeecCChHHHHHHHHcCCEEEEEc
Confidence            22222221  122 357899999999999999999973 4443

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.76  E-value=1.1e-08  Score=93.07  Aligned_cols=98  Identities=11%  Similarity=0.065  Sum_probs=72.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.+|+.++++.++.++    ++.|+|.+. ...++..++..|+..  ..|+           ++.     ..+..|
T Consensus        81 ~~~~~~~~~~~~l~~l~~~~----~~~i~t~~~-~~~~~~~l~~~gl~~~fd~v~-----------~~~-----~~~~~~  139 (210)
T d2ah5a1          81 YEAQLFPQIIDLLEELSSSY----PLYITTTKD-TSTAQDMAKNLEIHHFFDGIY-----------GSS-----PEAPHK  139 (210)
T ss_dssp             GSCEECTTHHHHHHHHHTTS----CEEEEEEEE-HHHHHHHHHHTTCGGGCSEEE-----------EEC-----SSCCSH
T ss_pred             hcccchhHHHHHHhhhhccc----chhhccccc-chhhhHHHHhhcccccccccc-----------ccc-----cccccc
Confidence            35788999999999998654    899999985 778999999888642  1222           111     112346


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                      ...+...++..+.+ +.++++||||.+|+.++..||+ .|.+.
T Consensus       140 p~~~~~~~~~~~~~-~~~~v~VGDs~~Di~aa~~aGi~~i~v~  181 (210)
T d2ah5a1         140 ADVIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQKLAIT  181 (210)
T ss_dssp             HHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             ccccchhhhhhhcc-cccceeecCCHHHHHHHHHcCCeEEEEc
Confidence            66677777776663 5789999999999999999997 55654

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.74  E-value=1.8e-08  Score=86.78  Aligned_cols=93  Identities=17%  Similarity=0.239  Sum_probs=72.9

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHH
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFN  401 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~  401 (499)
                      ++||+..+.++.|++.|   ++++|+|+. .......+.++.|++  ++++                 .+...+|...++
T Consensus        21 ~lr~~a~~~I~~L~~~G---i~v~ilTGD-~~~~a~~ia~~lgI~--~v~~-----------------~~~p~~k~~~v~   77 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMG---IKVGMITGD-NWRSAEAISRELNLD--LVIA-----------------EVLPHQKSEEVK   77 (135)
T ss_dssp             CBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCS--EEEC-----------------SCCHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHcC---CEEEEEcCc-chhhhhHHHhhhhhh--hhcc-----------------ccchhHHHHHHH
Confidence            69999999999999999   999999976 466677776776652  3332                 245678998888


Q ss_pred             HHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchH
Q 010855          402 DILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSL  443 (499)
Q Consensus       402 ~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L  443 (499)
                      ++..      +..+.++|||.||.++|..||+||+++....+
T Consensus        78 ~~q~------~~~v~~vGDg~nD~~aL~~Advgia~~~~~~~  113 (135)
T d2b8ea1          78 KLQA------KEVVAFVGDGINDAPALAQADLGIAVGSGSDV  113 (135)
T ss_dssp             HHTT------TSCEEEEECSSSSHHHHHHSSEEEEECCC---
T ss_pred             HHHc------CCEEEEEeCCCCcHHHHHhCCeeeecCccCHH
Confidence            7663      35678999999999999999999999876443

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=98.74  E-value=2.9e-08  Score=93.40  Aligned_cols=104  Identities=8%  Similarity=-0.017  Sum_probs=67.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQA  399 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~  399 (499)
                      ...+.||+.++++.|+++|   +++.|+|++- ...++..|+..|+...        |.+.+.++.-.+   .+.-....
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g---~~i~i~Tn~~-~~~~~~~l~~~~l~~~--------f~d~~~~~d~~~---~~KP~p~~  161 (257)
T d1swva_          97 YASPINGVKEVIASLRERG---IKIGSTTGYT-REMMDIVAKEAALQGY--------KPDFLVTPDDVP---AGRPYPWM  161 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---CEEEEBCSSC-HHHHHHHHHHHHHTTC--------CCSCCBCGGGSS---CCTTSSHH
T ss_pred             cCccCCcHHHHHHHHHhcc---cceeecCCCc-hhhHHHHHHHHhhccc--------cccccccccccc---ccccChHH
Confidence            5679999999999999999   9999999874 7788888887664321        001111111000   00001123


Q ss_pred             HHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          400 FNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       400 l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                      +...+...+......+++|||+.+|+.+++.||+ .|.+.
T Consensus       162 ~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~  201 (257)
T d1swva_         162 CYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI  201 (257)
T ss_dssp             HHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC
T ss_pred             HHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc
Confidence            3444444444234679999999999999999997 34443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=6.3e-08  Score=88.56  Aligned_cols=45  Identities=27%  Similarity=0.282  Sum_probs=33.0

Q ss_pred             hhhHHHHHHHH---hhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC
Q 010855          394 LEKLQAFNDIL---KDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS  439 (499)
Q Consensus       394 ~~K~~~l~~~~---~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~  439 (499)
                      .+|...++.+.   ...+.+ ..+++++|||.||++||+.||+||+|.+
T Consensus       183 ~~K~~~~~~l~~~~~~l~i~-~~~~iafGD~~NDl~Ml~~a~~~vaV~n  230 (232)
T d1xvia_         183 AGKDQAANWIIATYQQLSGK-RPTTLGLGDGPNDAPLLEVMDYAVIVKG  230 (232)
T ss_dssp             CCHHHHHHHHHHHHHHHHSS-CCEEEEEESSGGGHHHHHTSSEEEECCC
T ss_pred             chHHHHHHHHHHHHHHcCCC-hhcEEEEcCCHhHHHHHHhCCeEEEEeC
Confidence            34555544444   333342 4689999999999999999999999865

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=1.2e-06  Score=81.16  Aligned_cols=97  Identities=18%  Similarity=0.144  Sum_probs=69.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      +...+.||+.++++.+++ +   ++++|+|.+ ....++..++..|+..  ..+++..                ..+..|
T Consensus       106 ~~~~~~~~~~~~L~~L~~-~---~~l~i~Tn~-~~~~~~~~l~~~gl~~~fd~i~~s~----------------~~~~~K  164 (247)
T d2gfha1         106 QHMILADDVKAMLTELRK-E---VRLLLLTNG-DRQTQREKIEACACQSYFDAIVIGG----------------EQKEEK  164 (247)
T ss_dssp             HTCCCCHHHHHHHHHHHT-T---SEEEEEECS-CHHHHHHHHHHHTCGGGCSEEEEGG----------------GSSSCT
T ss_pred             ccCccCccHHHHHHHhhc-c---cceEEeecc-cchhhhhhhhhcccccccccccccc----------------ccccch
Confidence            367899999999999984 6   799999987 4778888898877642  2232211                011123


Q ss_pred             --HHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCcc-EEE
Q 010855          397 --LQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADIG-IVI  437 (499)
Q Consensus       397 --~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adig-iv~  437 (499)
                        ...++..+...+.+ +.++++|||+. +|+.++..+|+. +++
T Consensus       165 P~p~~~~~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~  208 (247)
T d2gfha1         165 PAPSIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVW  208 (247)
T ss_dssp             TCHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEE
T ss_pred             hhhhhHHHHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEE
Confidence              35566666665553 57899999996 899999999984 544

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.58  E-value=1.7e-07  Score=83.60  Aligned_cols=110  Identities=15%  Similarity=0.085  Sum_probs=79.3

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeecc-c-----------c--
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGE-I-----------V--  387 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~-~-----------~--  387 (499)
                      ++||+..+.++.|++.|   ++++++|+- +......+.++.|+...     .....+...+|. +           .  
T Consensus        20 p~R~~~~~~I~~l~~~G---I~v~miTGD-~~~tA~~ia~~~Gi~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~   90 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAG---IRVIMITGD-NKGTAIAICRRIGIFGE-----NEEVADRAYTGREFDDLPLAEQREACRR   90 (168)
T ss_dssp             CBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTSSCT-----TCCCTTTEEEHHHHHHSCHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHCc---CEEEEECCC-CHHHHHHHHHHcCCCCC-----ccccccccccccccchhhHHHHhhhhhh
Confidence            78999999999999999   999999987 46666777777775211     111111111210 0           0  


Q ss_pred             ---ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCCchHHh
Q 010855          388 ---NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSSSSLRR  445 (499)
Q Consensus       388 ---~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~~~L~~  445 (499)
                         --.+++.+|...++.+...     +..+.++|||.||.++|+.||+||.++....+++
T Consensus        91 ~~v~ar~~p~~K~~lv~~l~~~-----g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~  146 (168)
T d1wpga2          91 ACCFARVEPSHKSKIVEYLQSY-----DEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAK  146 (168)
T ss_dssp             CCEEESCCHHHHHHHHHHHHHT-----TCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHH
T ss_pred             hhhhhccchhHHHHHHHHHHhc-----ccceeEEecCCCCHHHHHhCCEEEEeccccHHHH
Confidence               0136778999999988763     3567899999999999999999999987665543

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=4.5e-07  Score=83.30  Aligned_cols=102  Identities=10%  Similarity=0.065  Sum_probs=70.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCce-EEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAF-RVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ...+.||..+++..++++|   +++.|+|.+- ...++..++..++... ..++.-  +++    +.      .+.-+..
T Consensus       125 ~~~~~pg~~e~l~~L~~~g---~~l~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~~--~d~----~~------~~KP~p~  188 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAG---MKVYIYSSGS-VEAQKLLFGHSTEGDILELVDGH--FDT----KI------GHKVESE  188 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHTBTTBCCGGGCSEE--ECG----GG------CCTTCHH
T ss_pred             ccccCCCHHHHHHHHhhcc---CceeecCCCc-HHHHHHHHHHcCcchhhhhccee--ecc----cc------ccCCCcH
Confidence            4678999999999999999   9999999984 7788888877664211 111000  111    00      0112345


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                      .+...++..+.+ +.++++|||+.+|+.+++.||+ .|++.
T Consensus       189 ~~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~  228 (253)
T d1zs9a1         189 SYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVV  228 (253)
T ss_dssp             HHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEe
Confidence            566666655553 5899999999999999999998 45553

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=98.54  E-value=8.4e-08  Score=84.69  Aligned_cols=108  Identities=9%  Similarity=0.074  Sum_probs=69.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcC-CCC--ceEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASG-DLN--AFRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~-gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ...+.+|..+++..++.+|   +.+.|+|.+... .....+... ++.  ...+++.+          ...    .+.-+
T Consensus        82 ~~~~~~~~~~l~~~l~~~~---~~~~i~t~~~~~-~~~~~~~~~~~l~~~fd~v~~s~----------~~~----~~Kp~  143 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQG---HRVVVLSNTNRL-HTTFWPEEYPEIRDAADHIYLSQ----------DLG----MRKPE  143 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTT---CEEEEEECCCCC-TTSCCGGGCHHHHHHCSEEEEHH----------HHT----CCTTC
T ss_pred             ccccCchhHHHHHHHHhcC---CeEEEEeCccHH-HHHHHHHHcccchhhccceeecc----------ccc----ccccc
Confidence            4579999999999999999   899999877422 222222221 111  12233221          000    11123


Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCCchHHhh
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSSSSLRRL  446 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~~~L~~~  446 (499)
                      .+.++..++..+.+ +.++++||||.+|+.+++.+|+ .|.+.++..+.++
T Consensus       144 ~~~~~~~~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~~~  193 (197)
T d2b0ca1         144 ARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDY  193 (197)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHH
T ss_pred             hHHHHHHHHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEECCCCCCHHh
Confidence            45566666666653 5789999999999999999998 7887776655443

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=98.53  E-value=1.6e-06  Score=78.55  Aligned_cols=99  Identities=9%  Similarity=0.001  Sum_probs=71.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK  396 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K  396 (499)
                      ....+.++..++++.+++++   .++.|+|.+. ...++..+...++..  ..+++..-                .+..|
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~---~~~~i~tn~~-~~~~~~~~~~~~~~~~fd~~~~s~~----------------~~~~K  149 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRG---LKLAILSNGS-PQSIDAVVSHAGLRDGFDHLLSVDP----------------VQVYK  149 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEESGG----------------GTCCT
T ss_pred             ccccccchhHHHHHHHHhcC---CeEEeecchH-HHHHHHHHhhccccccccceeeeee----------------eeccc
Confidence            46789999999999999999   9999999885 678888887766532  23333210                11123


Q ss_pred             --HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEc
Q 010855          397 --LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIG  438 (499)
Q Consensus       397 --~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~  438 (499)
                        ...++..++..+. .+.++++|||+..|+.+++.||+ .|.+.
T Consensus       150 P~p~~~~~~~~~~g~-~p~e~l~VgD~~~Di~~A~~aG~~~v~v~  193 (220)
T d1zrna_         150 PDNRVYELAEQALGL-DRSAILFVASNAWDATGARYFGFPTCWIN  193 (220)
T ss_dssp             TSHHHHHHHHHHHTS-CGGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred             cHHHHHHHHHHHhCC-CCceEEEEecChHhHHHHHHcCCEEEEEc
Confidence              2455566665555 35789999999999999999997 45554

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=98.52  E-value=5.8e-07  Score=81.94  Aligned_cols=99  Identities=7%  Similarity=0.019  Sum_probs=69.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhhH
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEKL  397 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~  397 (499)
                      ...+.||+.++++.++++|   +++.|+|.+-   .....++..++..  ..+++           +.   ....+.-+.
T Consensus        89 ~~~~~~g~~~~l~~l~~~~---~~i~i~s~~~---~~~~~l~~~~l~~~f~~i~~-----------~~---~~~~~KP~~  148 (221)
T d1o08a_          89 PADVYPGILQLLKDLRSNK---IKIALASASK---NGPFLLERMNLTGYFDAIAD-----------PA---EVAASKPAP  148 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTT---CEEEECCSCT---THHHHHHHTTCGGGCSEECC-----------TT---TSSSCTTST
T ss_pred             cccccCCceeccccccccc---cceEEEeecc---hhhHHHHhhccccccccccc-----------cc---cccccccCh
Confidence            4678899999999999999   8999999752   3566777766532  11111           10   001111234


Q ss_pred             HHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          398 QAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       398 ~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      ..++..++..+.+ +.++++|||+..|+.+++.+|+ .|.++.
T Consensus       149 ~~~~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~~  190 (221)
T d1o08a_         149 DIFIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred             HHHHHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence            5677777777764 6789999999999999999997 566654

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=7e-07  Score=80.55  Aligned_cols=119  Identities=12%  Similarity=0.071  Sum_probs=73.3

Q ss_pred             HhhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCCh---HHHHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCC
Q 010855          317 ASQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCG---DLIRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLE  391 (499)
Q Consensus       317 ~~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~---~~I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~  391 (499)
                      ......+.||+.+++..++++|   +++.|+|.+...   ...+......++.  ...|++..          .    ..
T Consensus        94 ~~~~~~~~~~~~~~l~~L~~~~---~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~----------~----~~  156 (225)
T d1zd3a1          94 AISARKINRPMLQAALMLRKKG---FTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC----------Q----VG  156 (225)
T ss_dssp             HHHHCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH----------H----HT
T ss_pred             HhhcCCCCccHHHHHHHHHhcc---CccccccccchhhHHHHHHHHhhhcChHhhccEEEecc----------c----cc
Confidence            3457889999999999999999   999999976422   1222221111111  12333321          0    01


Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCCc-hHHhhhhhhCCc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSSS-SLRRLGDHFGVS  453 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~~-~L~~~~~~~gi~  453 (499)
                      .+.-+...++..++..+.. +.++++|||+.+|+.+++.+|+ +|.+.+.. .+.++-+-.|++
T Consensus       157 ~~KP~~~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~~~~l~~~~~~~  219 (225)
T d1zd3a1         157 MVKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQ  219 (225)
T ss_dssp             CCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSSHHHHHHHHHHHHTSC
T ss_pred             cchhHHHHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEECCcchhHHHHHHccCcc
Confidence            1112345666666666653 5789999999999999999998 66665542 233333344443

>d1otva_ a.132.1.4 (A:) Coenzyme PQQ synthesis protein C, PqqC {Klebsiella pneumoniae [TaxId: 573]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: PqqC-like
domain: Coenzyme PQQ synthesis protein C, PqqC
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.44  E-value=1.8e-08  Score=96.06  Aligned_cols=143  Identities=10%  Similarity=-0.002  Sum_probs=100.8

Q ss_pred             cCCCCCHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHhCCCCCC--C-CCCChhhHHHHHHHHHHhc-CCcccccccc
Q 010855            7 PSLSHDEEDKLAIRKLRKRVK-QK-----LKTLDSLVREWGFELPE--E-IITDDATVKCTDFLLSTAS-GKVEGEKVLG   76 (499)
Q Consensus         7 ~~~a~d~~~~~~~~~~~~~i~-~E-----~~~h~~~~~~~g~~~~~--~-~~~~~~~~~Yt~~l~~~a~-~~~~~~~~~~   76 (499)
                      .++++|.+.+..+..-+..-. .+     .+++..+++.+|++.++  . .++.|+|..|+++++..+. +.+       
T Consensus        64 ~a~~~d~~~r~~ll~nl~ee~g~~~~~~H~~l~~~f~~~lGl~~e~v~~~~~~lp~t~~~v~~~~~~~~~~~~-------  136 (254)
T d1otva_          64 MANCPDAQTRRKWVQRILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRACW-------  136 (254)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHCSTTCCCHHHHHHHHHHHTTCCHHHHHTCTTCCHHHHHHHHHHHHHHHHSCH-------
T ss_pred             HhcCCCHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHHhCCCHHHHhccccCCHHHHHHHHHHHHHhccccH-------
Confidence            688999998877654332222 11     67899999999999764  3 3458999999999999884 443       


Q ss_pred             cccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhcccccccCChhHH-------HHHHHHHHHHHHHh
Q 010855           77 KIETPFEKIKVAAYTLSAISPCMRLFEVIAKEIQALLNPDDGSHLYKKWIDYYCSQSFQ-------ESALQTEELLDKLS  149 (499)
Q Consensus        77 ~~~~~~~~~~~~~~~l~Al~PC~~~Y~~ig~~~~~~~~~~~~~~~Y~~WI~~y~s~~f~-------~~~~~~~~~ld~l~  149 (499)
                                  ..+++++++|. .+..|.   .....   .-..|..||+.++-+.|.       .-+....+++++++
T Consensus       137 ------------~~~~a~~~~E~-~~p~i~---~~~~~---gl~~~y~~i~~~~l~~F~~h~~~d~~h~e~~~~l~~~~~  197 (254)
T d1otva_         137 ------------QEAACSSLTEL-FAPQIH---QSRLD---SWPQHYPWIKEEGYFYFRSRLSQANRDVEHGLALAKAYC  197 (254)
T ss_dssp             ------------HHHHHGGGGGG-GCCSTT---CCSSC---SSTTTCTTSCHHHHHHHHHHHHTCCSCTTHHHHHHHHHC
T ss_pred             ------------HHHHHHHHHHH-HhHHHH---HHHHH---HHHHhcCccCHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                        23333333222 222221   11111   345688899999887883       45567888999987


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHhcCC
Q 010855          150 VLLTGEELEVIKKLYYKAIKLHVNFFAA  177 (499)
Q Consensus       150 ~~~~~~e~~~~~~~F~~a~~lE~~Fw~~  177 (499)
                        -|+++++++.+++..+|+++|.|||+
T Consensus       198 --~t~e~q~~~l~a~~~s~~~lw~flD~  223 (254)
T d1otva_         198 --DSAEKQNRMLEILQFKLDILWSMLDA  223 (254)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              37899999999999999999999986

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.39  E-value=1e-06  Score=80.31  Aligned_cols=105  Identities=11%  Similarity=0.077  Sum_probs=66.8

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ....+.||..++++.++      .+..|+|++. ...++..+...++...        |+..+.++.-.+. ....-+..
T Consensus        82 ~~~~~~~g~~~~L~~l~------~~~~i~t~~~-~~~~~~~l~~~~l~~~--------f~~~~~~~~~~~~-~~~KP~~~  145 (222)
T d2fdra1          82 RDVKIIDGVKFALSRLT------TPRCICSNSS-SHRLDMMLTKVGLKPY--------FAPHIYSAKDLGA-DRVKPKPD  145 (222)
T ss_dssp             HHCCBCTTHHHHHHHCC------SCEEEEESSC-HHHHHHHHHHTTCGGG--------TTTCEEEHHHHCT-TCCTTSSH
T ss_pred             hccchhhhHHHHhhhcc------ccceeeeecc-hhhhhhhhcccccccc--------cceeecccccccc-cccccCHH
Confidence            36789999999998774      3567888885 7788999988876421        1111111110000 00111224


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      .+...+...+. .+.++++|||+..|+.+++.+++ .|.+...
T Consensus       146 ~~~~~~~~l~~-~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~  187 (222)
T d2fdra1         146 IFLHGAAQFGV-SPDRVVVVEDSVHGIHGARAAGMRVIGFTGA  187 (222)
T ss_dssp             HHHHHHHHHTC-CGGGEEEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred             HHHHHHHhhCC-CCceEEEEcCCHHHHHHHHHcCCEEEEEccC
Confidence            45555555555 35789999999999999999997 4556543

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.38  E-value=8.6e-07  Score=81.82  Aligned_cols=125  Identities=16%  Similarity=0.221  Sum_probs=97.0

Q ss_pred             cCCCHHHHHHHhh-cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeC-Ce---
Q 010855          307 KGLNLEDIKWASQ-HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEE-SI---  381 (499)
Q Consensus       307 ~Gi~~~~l~~~~~-~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~-g~---  381 (499)
                      .|++-+++.++.+ ++.+-||+.+.++.+++.    .+.+|||-++ ..+|+++....|++ .+++++++.++. ..   
T Consensus        65 ~Gvt~edL~~fSE~~~~lvpgA~~~lk~l~~~----m~~yIvSTSY-~qyi~al~~~~gfp-~e~~~T~~~lD~~~~p~e  138 (308)
T d1y8aa1          65 AGVKNRDVERIAELSAKFVPDAEKAMATLQER----WTPVVISTSY-TQYLRRTASMIGVR-GELHGTEVDFDSIAVPEG  138 (308)
T ss_dssp             TTCCHHHHHHHHHHHCCBCTTHHHHHHHHHTT----CEEEEEEEEE-HHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHH
T ss_pred             hCCCHHHHHHHhhhceeecCCHHHHHHHHHhh----CCcEEEeccH-HHHHHHHHhhcCCC-ceeecccccccccCCChH
Confidence            5899999999987 899999999999999875    7999999998 78999999988886 559999998863 11   


Q ss_pred             ------------eec-------------------ccc--ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHH
Q 010855          382 ------------STG-------------------EIV--NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCL  428 (499)
Q Consensus       382 ------------~tG-------------------~~~--~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l  428 (499)
                                  ..+                   .+.  -+...|..|.++++.++...+..   ..+|||||.||..||
T Consensus       139 e~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~---~~~~VGDSITDve~L  215 (308)
T d1y8aa1         139 LREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGID---FPVVVGDSISDYKMF  215 (308)
T ss_dssp             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCS---SCEEEECSGGGHHHH
T ss_pred             HHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCC---cceeccCccccHHHH
Confidence                        001                   111  13456678888998888776653   359999999999999


Q ss_pred             HhcC----ccEEEcCC
Q 010855          429 LEAD----IGIVIGSS  440 (499)
Q Consensus       429 ~~Ad----igiv~~~~  440 (499)
                      +.+.    +.|.|..+
T Consensus       216 r~~r~~gGlaIsFNGN  231 (308)
T d1y8aa1         216 EAARGLGGVAIAFNGN  231 (308)
T ss_dssp             HHHHHTTCEEEEESCC
T ss_pred             HHHhcCCCeeEEecCc
Confidence            9983    33444444

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=4e-07  Score=82.83  Aligned_cols=119  Identities=15%  Similarity=0.089  Sum_probs=75.4

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCcccEEEEeccCC---hHHHHHHHHcCCCC--ceEEEeeceEeeCCeeeccccccCCC
Q 010855          318 SQHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWC---GDLIRSAFASGDLN--AFRVHSNELVYEESISTGEIVNKLES  392 (499)
Q Consensus       318 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s---~~~I~~~L~~~gl~--~~~I~aN~l~~~~g~~tG~~~~~~~~  392 (499)
                      .....++||+.+++..++++|   .++.|+|.+..   ....+..+...++.  ...+++++-.   +           .
T Consensus        93 ~~~~~~~~~~~~~L~~L~~~~---~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~---~-----------~  155 (222)
T d1cr6a1          93 MAARSINRPMLQAAIALKKKG---FTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQV---G-----------M  155 (222)
T ss_dssp             HHTCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHH---S-----------C
T ss_pred             HhcCCCCccHHHHHHHHHhcC---CceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhc---c-----------C
Confidence            346789999999999999999   99999997532   12334333333332  1234443210   0           0


Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC-chHHhhhhhhCCcc
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS-SSLRRLGDHFGVSF  454 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~-~~L~~~~~~~gi~~  454 (499)
                      +.-....+...+...+.. +.++++|||+.+|+.+++.+|+ +|.|... ..+.++-+-.|+.+
T Consensus       156 ~KP~p~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~~~~~~~  218 (222)
T d1cr6a1         156 IKPEPQIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKVTGTQF  218 (222)
T ss_dssp             CTTCHHHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHHHHSCCC
T ss_pred             CCCChHHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHHhhCCCC
Confidence            111234455555555553 5789999999999999999997 7777654 34555545556653

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=98.27  E-value=2.2e-05  Score=71.91  Aligned_cols=98  Identities=10%  Similarity=0.012  Sum_probs=67.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc--eEEEeeceEeeCCeeeccccccCCChhhh-
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA--FRVHSNELVYEESISTGEIVNKLESPLEK-  396 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-  396 (499)
                      .....|+..+.++.++  +   ..+.++|.+. ...+...+...++..  ..|++.+-                .+..| 
T Consensus        91 ~~~~~~~~~~~L~~l~--~---~~~~v~s~~~-~~~~~~~~~~~~~~~~fd~v~~s~~----------------~~~~KP  148 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--P---LKRAILSNGA-PDMLQALVANAGLTDSFDAVISVDA----------------KRVFKP  148 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--T---SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGGG----------------GTCCTT
T ss_pred             ccccchhhhHHHHHHh--h---hceeEEeccc-hHHHHHHHhhccccccccccccccc----------------ccccCc
Confidence            5688899999998875  4   6788888884 677888888776532  23333210                01123 


Q ss_pred             -HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          397 -LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       397 -~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                       .+.++..++..+.. +.++++|||+.+|+.+++.||+ .|.+.+.
T Consensus       149 ~p~~f~~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~r~  193 (245)
T d1qq5a_         149 HPDSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARL  193 (245)
T ss_dssp             SHHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred             cHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence             24555566655553 5789999999999999999997 5656554

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.03  E-value=1.1e-05  Score=76.05  Aligned_cols=54  Identities=24%  Similarity=0.308  Sum_probs=45.5

Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhh
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGD  448 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~  448 (499)
                      .+|...++.+++..+.+ ..+++++|||.||++||..|++||+|++. +.+.+.+.
T Consensus       212 ~~K~~ai~~l~~~~gi~-~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~  266 (285)
T d1nrwa_         212 ASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIAD  266 (285)
T ss_dssp             CSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCS
T ss_pred             chhhhHHHHHHhhcccC-cccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence            47999999999887764 57899999999999999999999999864 56665554

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=9.9e-06  Score=70.92  Aligned_cols=100  Identities=11%  Similarity=0.028  Sum_probs=71.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      +.+.+.||+.++++.|+++|   +++.|+|.+....+.+..++.+++....         ..+..        ....|..
T Consensus        43 ~~~~l~pgv~e~L~~L~~~G---~~~~v~S~~~~~~~~~~~l~~~~~~~~~---------~~~~~--------~~kp~~~  102 (164)
T d1u7pa_          43 QNIQLYPEVPEVLGRLQSLG---VPVAAASRTSEIQGANQLLELFDLGKYF---------IQREI--------YPGSKVT  102 (164)
T ss_dssp             CEECCCTTHHHHHHHHHHTT---CCEEEEECCSCHHHHHHHHHHTTCGGGC---------SEEEE--------SSSCHHH
T ss_pred             cccccchHHHHHHHHHHHCC---CcEEEEeccccchhhccchhcccccccc---------eeeec--------ccCCChH
Confidence            45789999999999999999   9999999886555677777776542110         00011        1113556


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      .+.+++...+.. +.++++|||+..|+.+++.+|+ .|.+..
T Consensus       103 ~~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~~i~v~~  143 (164)
T d1u7pa_         103 HFERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVTCIHIRD  143 (164)
T ss_dssp             HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred             HHHHHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence            677777766663 6899999999999999999998 444443

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.94  E-value=1.7e-05  Score=71.73  Aligned_cols=56  Identities=11%  Similarity=0.082  Sum_probs=45.1

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC-CchHHhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS-SSSLRRLGD  448 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~-~~~L~~~~~  448 (499)
                      .+..|...++.++...+.+ ..++++||||.||++|++.||+||+|++ .+.+++.|.
T Consensus       149 ~~~~K~~al~~l~~~~~i~-~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~  205 (230)
T d1wr8a_         149 PWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENAD  205 (230)
T ss_dssp             TTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCS
T ss_pred             CCcCcchhhcccccccccc-hhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhCC
Confidence            4567888888888777664 5789999999999999999999999975 456655443

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.92  E-value=2.5e-05  Score=71.29  Aligned_cols=54  Identities=15%  Similarity=0.104  Sum_probs=44.7

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC-CchHHhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS-SSSLRRL  446 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~-~~~L~~~  446 (499)
                      .+.+|...++.+++..+.+ ..++++||||.||++|+..|++||+|++ .+.+++.
T Consensus       148 ~~~~K~~ai~~l~~~~~i~-~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~  202 (225)
T d1l6ra_         148 RGEDKAFAVNKLKEMYSLE-YDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAV  202 (225)
T ss_dssp             TTCSHHHHHHHHHHHTTCC-GGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHH
T ss_pred             CccchHHHHHHHhhhhccc-hhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHh
Confidence            3568999999998887764 5789999999999999999999999975 4556543

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.75  E-value=1e-05  Score=74.79  Aligned_cols=61  Identities=18%  Similarity=0.200  Sum_probs=52.7

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC-CchHHhhhhhhCCc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS-SSSLRRLGDHFGVS  453 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~-~~~L~~~~~~~gi~  453 (499)
                      .+.+|...++.+.+..+.+ ..+++++|||.||++|+..+|+||+|++ .+.|++.+...+.+
T Consensus       159 ~~~~K~~a~~~l~~~~gi~-~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~  220 (244)
T d1s2oa1         159 QRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDS  220 (244)
T ss_dssp             TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCT
T ss_pred             CccchhHHHHHHHHhccCC-hhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhccccc
Confidence            4567999999999888774 4789999999999999999999999975 68899888877765

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=97.72  E-value=4.2e-05  Score=68.18  Aligned_cols=84  Identities=21%  Similarity=0.234  Sum_probs=62.6

Q ss_pred             HHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHHHHHHHHhhcCCC
Q 010855          331 FQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQAFNDILKDHSND  410 (499)
Q Consensus       331 l~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~  410 (499)
                      ++.+++.|   +.+.++|+.- ...+...+.+.++  ..++.                   ...+|...++.++...+..
T Consensus        41 i~~l~~~g---i~~~iis~~~-~~~v~~~~~~l~~--~~~~~-------------------~~~~K~~~l~~~~~~~~i~   95 (177)
T d1k1ea_          41 IKMLMDAD---IQVAVLSGRD-SPILRRRIADLGI--KLFFL-------------------GKLEKETACFDLMKQAGVT   95 (177)
T ss_dssp             HHHHHHTT---CEEEEEESCC-CHHHHHHHHHHTC--CEEEE-------------------SCSCHHHHHHHHHHHHTCC
T ss_pred             HHHHhhhc---EEEEEecCCc-hhHHHHHHhhhcc--ccccc-------------------ccccHHHHHHHHHHHhcCC
Confidence            56667778   9999999874 4566666665443  22221                   1236888888888877664


Q ss_pred             CCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          411 EQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       411 ~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                       ..+++|+||+.||++||..|++++++.+.
T Consensus        96 -~~~v~~vGDd~nDl~~l~~~g~siap~nA  124 (177)
T d1k1ea_          96 -AEQTAYIGDDSVDLPAFAACGTSFAVADA  124 (177)
T ss_dssp             -GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             -cceeEEecCCccHHHHHhhCCeEEEcCCc
Confidence             58899999999999999999999998875

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=3.2e-05  Score=67.78  Aligned_cols=108  Identities=14%  Similarity=0.147  Sum_probs=66.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCcccEEEEecc-------CCh-------HHHHHHHHcCCCCceEEEeeceEeeCCeeecc
Q 010855          320 HLIFQDGCRRFFQNTIKSTNFKTDVHVLSYC-------WCG-------DLIRSAFASGDLNAFRVHSNELVYEESISTGE  385 (499)
Q Consensus       320 ~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g-------~s~-------~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~  385 (499)
                      .+.+-||..+.++.++++|   ++++|+|..       ++.       ..+...|...++....|+.......++.   .
T Consensus        28 ~~~~~pgv~e~L~~L~~~g---~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~---~  101 (161)
T d2fpwa1          28 KLAFEPGVIPQLLKLQKAG---YKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADEC---D  101 (161)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---EEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCC---S
T ss_pred             HceECccHHHHHHHHHHcC---CceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccc---c
Confidence            4678899999999999999   999999963       111       2345556666654444433211110110   0


Q ss_pred             ccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcCC
Q 010855          386 IVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGSS  440 (499)
Q Consensus       386 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~~  440 (499)
                      ...+..      ..+.++++..+.+ ..+++||||+.+|+.|+..|++ +|.+.++
T Consensus       102 ~~KP~p------~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1         102 CRKPKV------KLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             SSTTSS------GGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             cccccc------HHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence            011111      2344455555553 5789999999999999999998 6666554

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=97.65  E-value=0.00024  Score=60.15  Aligned_cols=99  Identities=5%  Similarity=-0.064  Sum_probs=54.7

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccC--ChHHHHHHHHcCC-----CCceEEEeeceEeeCCeeecccccc-CCCh
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCW--CGDLIRSAFASGD-----LNAFRVHSNELVYEESISTGEIVNK-LESP  393 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~--s~~~I~~~L~~~g-----l~~~~I~aN~l~~~~g~~tG~~~~~-~~~g  393 (499)
                      .+.||..++++.++++|   +.++++|+-=  +...+...|..++     +......         .....-.+. ....
T Consensus        36 ~~~p~v~~~l~~l~~~G---~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~d~  103 (149)
T d1ltqa1          36 VINPMVVELSKMYALMG---YQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLV---------MQCQREQGDTRKDD  103 (149)
T ss_dssp             CBCHHHHHHHHHHHHTT---CEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCS---------EEEECCTTCCSCHH
T ss_pred             ccCHHHHHHHHHHHhcc---CeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEE---------EeecccccccCCch
Confidence            56799999999999999   9999999831  0111222222210     0000000         000000011 1122


Q ss_pred             hhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEE
Q 010855          394 LEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIV  436 (499)
Q Consensus       394 ~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv  436 (499)
                      .-|...++++...    ....+++|||+.+|+.|++.+|+..+
T Consensus       104 ~~k~~~l~~~~~~----~~~i~~~igD~~~dv~a~~~~Gi~~~  142 (149)
T d1ltqa1         104 VVKEEIFWKHIAP----HFDVKLAIDDRTQVVEMWRRIGVECW  142 (149)
T ss_dssp             HHHHHHHHHHTTT----TCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHhccC----CCceEEEEcCCHHHHHHHHHCCCcEE
Confidence            3455666655432    12334578999999999999998543

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=1.9e-05  Score=73.86  Aligned_cols=77  Identities=17%  Similarity=0.186  Sum_probs=54.7

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhhhhhCCccccccchHHHHHHHhhc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLGDHFGVSFVPLFSSLVERQKELVD  470 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~  470 (499)
                      .+.+|...++.+++..+.+ ..+++++|||.||++|+..|++||+|++. +.|++.|... . -.+-+.++...-+.+.+
T Consensus       187 ~~~sK~~al~~l~~~lgi~-~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v-~-~~~~~~Gva~~i~~~l~  263 (269)
T d1rlma_         187 PGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYA-T-DDNNHEGALNVIQAVLD  263 (269)
T ss_dssp             TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEE-C-CCGGGTHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHhhhhccc-cccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEE-c-CCCCccHHHHHHHHHHh
Confidence            3457999999998887764 57899999999999999999999999864 6677666421 0 01113445555455554


Q ss_pred             C
Q 010855          471 G  471 (499)
Q Consensus       471 ~  471 (499)
                      +
T Consensus       264 ~  264 (269)
T d1rlma_         264 N  264 (269)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.60  E-value=1.4e-05  Score=79.91  Aligned_cols=111  Identities=15%  Similarity=0.076  Sum_probs=68.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCChHHHHHHHHcCCCCc----eEEEeeceEee------CCeeecccc---
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCGDLIRSAFASGDLNA----FRVHSNELVYE------ESISTGEIV---  387 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~~~I~~~L~~~gl~~----~~I~aN~l~~~------~g~~tG~~~---  387 (499)
                      ++.+||..++++.|+++|   +++.|+|+.- ....+.++++.|+..    ..+++..=...      +....+...   
T Consensus       214 i~p~~~v~~~l~~lk~aG---i~v~i~Tg~~-~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~  289 (380)
T d1qyia_         214 LRPVDEVKVLLNDLKGAG---FELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFS  289 (380)
T ss_dssp             SSCHHHHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHH
T ss_pred             ccchhhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHH
Confidence            345669999999999999   9999999984 778899998887632    22333211000      000001100   


Q ss_pred             ------ccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcC---ccEEEcCC
Q 010855          388 ------NKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEAD---IGIVIGSS  440 (499)
Q Consensus       388 ------~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Ad---igiv~~~~  440 (499)
                            ........|.++.+.+    .. .+..++++|||.+|++|++.||   +||.+|-.
T Consensus       290 ~~~~~~~~~~~~~~k~~iv~~~----~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~  346 (380)
T d1qyia_         290 YIAALYGNNRDKYESYINKQDN----IV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK  346 (380)
T ss_dssp             HHHHHHCCCGGGHHHHHHCCTT----CS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred             HHHHHHHcCCCHHHHHHHHHHh----CC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCC
Confidence                  0011122233322221    12 2467999999999999999999   67777643

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.56  E-value=9.9e-05  Score=67.38  Aligned_cols=111  Identities=10%  Similarity=0.045  Sum_probs=67.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEec-------cCCh-------HHHHHHHHcCCCCceEEEeeceEeeCCeeeccc
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSY-------CWCG-------DLIRSAFASGDLNAFRVHSNELVYEESISTGEI  386 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~-------g~s~-------~~I~~~L~~~gl~~~~I~aN~l~~~~g~~tG~~  386 (499)
                      +.+.||+.+.++.|+++|   +.+.|||.       .++.       ..+...|+..|+....++.....- ++.  +..
T Consensus        47 ~~l~pgv~e~L~~L~~~G---~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~-~~~--~~~  120 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAG---IPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHE-AGV--GPL  120 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHT---CCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCT-TCC--STT
T ss_pred             eEecccHHHHHHHHHhhC---CeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccc-ccc--ccc
Confidence            568899999999999999   99999994       1211       123444555554333343332211 110  000


Q ss_pred             cccCCChhhh--HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          387 VNKLESPLEK--LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       387 ~~~~~~g~~K--~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      .... +..-|  ...+.+.++..+.+ ..+++||||+.+|+.++..|++ .|++..
T Consensus       121 ~~~~-~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~~  174 (209)
T d2o2xa1         121 AIPD-HPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLVD  174 (209)
T ss_dssp             CCSS-CTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEET
T ss_pred             cccc-cccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEEeC
Confidence            0011 11123  23566666666653 5789999999999999999998 455543

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.47  E-value=3.9e-05  Score=71.57  Aligned_cols=56  Identities=20%  Similarity=0.347  Sum_probs=47.3

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcC-CchHHhhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGS-SSSLRRLGD  448 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~-~~~L~~~~~  448 (499)
                      .+.+|...++.+++..+.+ ..+++++|||.||++|+..||+||+|++ .+.+++.|.
T Consensus       183 ~~~sK~~al~~l~~~~~i~-~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~  239 (260)
T d2rbka1         183 KGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD  239 (260)
T ss_dssp             TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS
T ss_pred             CCCCHHHHHHHHHHhcccc-HhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence            4557999999998877764 5789999999999999999999999996 467777664

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.39  E-value=6e-05  Score=70.34  Aligned_cols=54  Identities=15%  Similarity=0.248  Sum_probs=44.6

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      +.+|...++.+....+.+ ..+++++|||.||++|+..||+||+|++. +.+++.|
T Consensus       205 ~~~K~~~l~~l~~~~~i~-~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a  259 (283)
T d2b30a1         205 GHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHA  259 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHS
T ss_pred             cchhHHHHHHHhhhcccc-cceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhC
Confidence            457988999888877664 57899999999999999999999999864 5666544

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.38  E-value=4.8e-05  Score=69.32  Aligned_cols=48  Identities=21%  Similarity=0.086  Sum_probs=38.3

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS  440 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~  440 (499)
                      +.+|...++.++...+.....+++++|||.||++|+..||+||+|++.
T Consensus       177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na  224 (243)
T d1wzca1         177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSL  224 (243)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred             hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCC
Confidence            456888777777654221346899999999999999999999999874

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.38  E-value=4.2e-05  Score=71.62  Aligned_cols=55  Identities=15%  Similarity=0.245  Sum_probs=45.7

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+.+|...++.+++..+.+ ..++++||||.||++|+..+++||+|++. +.+++.|
T Consensus       187 ~~~~K~~ai~~l~~~~~i~-~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A  242 (267)
T d1nf2a_         187 KNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEAS  242 (267)
T ss_dssp             TTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHC
T ss_pred             CCCchhHHHHHHHHhhccC-cccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhC
Confidence            3457999999998887764 57899999999999999999999999864 5666555

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=5.8e-05  Score=70.35  Aligned_cols=55  Identities=13%  Similarity=0.236  Sum_probs=45.3

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEcCC-chHHhhh
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIGSS-SSLRRLG  447 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~~~-~~L~~~~  447 (499)
                      .+.+|...++.++...+.+ ..+++++|||.||++|++.|++||+|++. +.|++.+
T Consensus       194 ~~~~K~~al~~l~~~~~i~-~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a  249 (271)
T d1rkqa_         194 KRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVA  249 (271)
T ss_dssp             TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC
T ss_pred             CCCCcccccceehhhcccc-hhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhC
Confidence            3457999999999887764 46899999999999999999999999864 5665544

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.0011  Score=58.28  Aligned_cols=106  Identities=14%  Similarity=0.120  Sum_probs=61.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCcccEEEEeccCCh---------------HHHHHHHHcCCCCceE-EEeeceEeeCCeeec
Q 010855          321 LIFQDGCRRFFQNTIKSTNFKTDVHVLSYCWCG---------------DLIRSAFASGDLNAFR-VHSNELVYEESISTG  384 (499)
Q Consensus       321 i~lr~G~~efl~~l~~~g~~~~~~~IVS~g~s~---------------~~I~~~L~~~gl~~~~-I~aN~l~~~~g~~tG  384 (499)
                      +.+-||..++++.++++|   +.+.|+|.- +.               .++...+...++.... .+|-... +++  .+
T Consensus        26 ~~~~~gv~e~l~~L~~~g---~~~~ivTNq-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p-~~~--~~   98 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMG---FALVVVTNQ-SGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHP-QGS--VE   98 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTT---CEEEEEEEC-THHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBT-TCS--SG
T ss_pred             eeECCCHHHHHHHHhhcC---chhhhhhcc-chhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccccc-ccc--cc
Confidence            567899999999999999   999999963 11               1222223333332222 2231110 111  01


Q ss_pred             cccccCCChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCcc
Q 010855          385 EIVNKLESPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIG  434 (499)
Q Consensus       385 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adig  434 (499)
                      .+...+.+..=+...+...++..+.+ ..+++||||+.+|+.|+..|+++
T Consensus        99 ~~~~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~  147 (182)
T d2gmwa1          99 EFRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVG  147 (182)
T ss_dssp             GGBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCS
T ss_pred             cccccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCC
Confidence            11111111111223455555555553 57899999999999999999984

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.07  E-value=0.00057  Score=60.85  Aligned_cols=42  Identities=17%  Similarity=0.282  Sum_probs=32.7

Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      .+.+...+...+.. +.++++|||+..|+.+++.||+ .|.+.+
T Consensus       162 p~~f~~~~~~lg~~-p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r  204 (225)
T d2g80a1         162 TQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASR  204 (225)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred             hhHhHHHHHhcccC-chhceeecCCHHHHHHHHHcCCEEEEEeC
Confidence            45666666666653 6899999999999999999997 566654

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0034  Score=56.68  Aligned_cols=95  Identities=15%  Similarity=0.219  Sum_probs=58.9

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEeccC--ChHHHHHHH-HcCCCCceEEEeeceEeeCCeeeccccccCCChhhhHH
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSYCW--CGDLIRSAF-ASGDLNAFRVHSNELVYEESISTGEIVNKLESPLEKLQ  398 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~g~--s~~~I~~~L-~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~  398 (499)
                      ..-||+.+|++.++++|   +.++.||+=.  ..+....-| +..|++...  -+.+.+.++.         ..-..|..
T Consensus        86 ~p~pga~~fl~~~~~~G---v~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~--~~~vll~~~~---------~~K~~rr~  151 (209)
T d2b82a1          86 IPKEVARQLIDMHVRRG---DAIFFVTGRSPTKTETVSKTLADNFHIPATN--MNPVIFAGDK---------PGQNTKSQ  151 (209)
T ss_dssp             EECHHHHHHHHHHHHHT---CEEEEEECSCCCSSCCHHHHHHHHTTCCTTT--BCCCEECCCC---------TTCCCSHH
T ss_pred             CcchhHHHHHHHHHHcC---CeEEEEeCCchhhHHHHHHHHHHHcCCCccc--ccceEeeCCC---------CCchHHHH
Confidence            35689999999999999   9999999731  122333334 335654221  0111121110         11123666


Q ss_pred             HHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCc-cEEEcC
Q 010855          399 AFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       399 ~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adi-giv~~~  439 (499)
                      .|++    +     ..++++||..+|+.++.+|++ ||-+-+
T Consensus       152 ~Ik~----y-----~I~l~~GD~l~Df~aA~eagi~~iRi~r  184 (209)
T d2b82a1         152 WLQD----K-----NIRIFYGDSDNDITAARDVGARGIRILR  184 (209)
T ss_dssp             HHHH----T-----TEEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred             HHHH----c-----CeEEEecCCHHHHhHHHHcCCCceEeec
Confidence            6543    2     347799999999999999996 777644

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.39  E-value=0.0011  Score=59.12  Aligned_cols=41  Identities=15%  Similarity=0.173  Sum_probs=34.2

Q ss_pred             ChhhhHHHHHHHHhhcCCCCCceEEEEcCCcccHHHHHhcCccEEEc
Q 010855          392 SPLEKLQAFNDILKDHSNDEQNLTVYIGGSPGDLLCLLEADIGIVIG  438 (499)
Q Consensus       392 ~g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~tDl~~l~~Adigiv~~  438 (499)
                      .|.+|...++.+...      ..++++|||.||+.|+..++.|+.|+
T Consensus       156 ~g~~Kg~al~~l~~~------~~~i~~GDs~ND~~Mf~~~~~~~av~  196 (229)
T d1u02a_         156 PGVNKGSAIRSVRGE------RPAIIAGDDATDEAAFEANDDALTIK  196 (229)
T ss_dssp             TTCCHHHHHHHHHTT------SCEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred             CCCCHHHHHHHHhcc------ccceeecCCCChHHHHhccCCeEEEE
Confidence            456799999998852      56899999999999999998776665

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00089  Score=59.88  Aligned_cols=53  Identities=11%  Similarity=0.188  Sum_probs=41.1

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcCCc----ccHHHHHhcC-ccEEEcCCchHHhhhhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGGSP----GDLLCLLEAD-IGIVIGSSSSLRRLGDH  449 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGDs~----tDl~~l~~Ad-igiv~~~~~~L~~~~~~  449 (499)
                      +.+|...|+.+.+.    ...+++++||+.    ||++|++.|+ .|++|++.....+.|++
T Consensus       183 ~vsKg~al~~L~~~----~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~  240 (244)
T d2fuea1         183 GWDKRYCLDSLDQD----SFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCRE  240 (244)
T ss_dssp             TCSTTHHHHHHTTS----CCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHH
T ss_pred             hccHHHHHHHHhcC----ChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHH
Confidence            45799999888753    247899999965    9999999998 69999986555555544

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0017  Score=58.20  Aligned_cols=53  Identities=13%  Similarity=0.251  Sum_probs=37.5

Q ss_pred             hhhhHHHHHHHHhhcCCCCCceEEEEcC----CcccHHHHHhcC-ccEEEcCCchHHhhhhh
Q 010855          393 PLEKLQAFNDILKDHSNDEQNLTVYIGG----SPGDLLCLLEAD-IGIVIGSSSSLRRLGDH  449 (499)
Q Consensus       393 g~~K~~~l~~~~~~~~~~~~~~vIyiGD----s~tDl~~l~~Ad-igiv~~~~~~L~~~~~~  449 (499)
                      +.+|...++.++..    ...+++++||    |.||++|++.|+ .|+.+.+....++.|+.
T Consensus       183 ~vsKg~al~~l~~~----~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~~~~~  240 (243)
T d2amya1         183 GWDKRYCLRHVEND----GYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICEL  240 (243)
T ss_dssp             TCSGGGGGGGTTTS----CCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHH
T ss_pred             ccCHHHHHHHHhCC----CcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHHHHHH
Confidence            44677777766532    2478999999    779999999998 57777776566655543

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.21  E-value=0.62  Score=40.77  Aligned_cols=25  Identities=8%  Similarity=0.082  Sum_probs=22.2

Q ss_pred             CCChhHHHHHHHHHHcCCCcccEEEEec
Q 010855          322 IFQDGCRRFFQNTIKSTNFKTDVHVLSY  349 (499)
Q Consensus       322 ~lr~G~~efl~~l~~~g~~~~~~~IVS~  349 (499)
                      .+.|+..+.++.+.++|   ..++|||.
T Consensus        50 ~l~~~v~~~i~~L~~~g---y~iiIvTN   74 (195)
T d1yj5a1          50 ILYPEIPKKLQELAAEG---YKLVIFTN   74 (195)
T ss_dssp             ESCTTHHHHHHHHHHHT---CEEEEEEE
T ss_pred             eccCCHHHHHHHHHhCC---cEEEEecC
Confidence            45788999999999999   99999996

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.81  E-value=1.8  Score=36.87  Aligned_cols=30  Identities=20%  Similarity=0.088  Sum_probs=23.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCcccEEEEecc
Q 010855          319 QHLIFQDGCRRFFQNTIKSTNFKTDVHVLSYC  350 (499)
Q Consensus       319 ~~i~lr~G~~efl~~l~~~g~~~~~~~IVS~g  350 (499)
                      +.++.-||+.+.++.|.+.+.  ..++|+|+.
T Consensus        71 ~~L~p~~gA~e~l~~L~~~~~--~~v~i~t~~  100 (195)
T d1q92a_          71 FELEPLPGAVEAVKEMASLQN--TDVFICTSP  100 (195)
T ss_dssp             TTCCBCTTHHHHHHHHHHSTT--EEEEEEECC
T ss_pred             hhCCcccCHHHHHHHHhhccC--ccceEEccc
Confidence            457889999999999998651  467788764

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=85.10  E-value=0.37  Score=43.20  Aligned_cols=42  Identities=21%  Similarity=0.253  Sum_probs=32.7

Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~~  439 (499)
                      ...++..++..+. .++++++|||+. +|+.+++.||+ .|++..
T Consensus       179 p~~~~~a~~~lgi-~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~  222 (250)
T d2c4na1         179 PWIIRAALNKMQA-HSEETVIVGDNLRTDILAGFQAGLETILVLS  222 (250)
T ss_dssp             THHHHHHHHHHTC-CGGGEEEEESCTTTHHHHHHHTTCEEEEESS
T ss_pred             hhhHhhhhhhhcC-CchheEEecCChHHHHHHHHHCCCCEEEECC
Confidence            4566777766666 368999999995 69999999997 677654

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.06  E-value=0.41  Score=42.91  Aligned_cols=42  Identities=10%  Similarity=0.237  Sum_probs=32.2

Q ss_pred             hHHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEc
Q 010855          396 KLQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIG  438 (499)
Q Consensus       396 K~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~  438 (499)
                      +...+...++..+.. +.++++|||+. +|+.|++.||+ .|+|.
T Consensus       182 ~~~~~~~~~~~~gi~-~~~~l~IGD~~~~DI~~a~~aG~~si~V~  225 (253)
T d1yv9a1         182 KAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVT  225 (253)
T ss_dssp             SHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred             chhHHHHHHHHhCCC-ccceEEecCChHHHHHHHHHCCCCEEEEC
Confidence            455667777666663 57999999995 69999999998 56664

>d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium diphtheriae [TaxId: 1717]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase HmuO
species: Corynebacterium diphtheriae [TaxId: 1717]

Probab=82.65  E-value=5.4  Score=34.28  Aligned_cols=93  Identities=13%  Similarity=-0.024  Sum_probs=52.1

Q ss_pred             CCCCChhhHHHHHHHHHHh-cCCcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHH----HHHhhcCCCCCcch
Q 010855           47 EIITDDATVKCTDFLLSTA-SGKVEGEKVLGKIETPFEKIKVAAYTLSAISPCMRLFEVIAK----EIQALLNPDDGSHL  121 (499)
Q Consensus        47 ~~~~~~~~~~Yt~~l~~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~l~Al~PC~~~Y~~ig~----~~~~~~~~~~~~~~  121 (499)
                      ..+++|++.+|++++...+ ..+.                   ..+++.++.-+-+-..-|+    .+.+....+ +  .
T Consensus        93 ~~~~~~~~~~y~~~~~~~~~~~~p-------------------~~llg~~Yv~e~G~~~GGq~i~k~l~~~l~l~-~--~  150 (207)
T d1wzda1          93 RITASPAVIDYVNRLEEIRDNVDG-------------------PALVAHHYVRYLGDLSGGQVIARMMQRHYGVD-P--E  150 (207)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTCH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-G--G
T ss_pred             cCCCChhHHHHHHHHHHHhccCCH-------------------HHHHHHHHHHHHHHhhhhHHHHHHHHHHcCCC-C--C
Confidence            3678999999999999887 3443                   3455555444433333344    343333322 1  1


Q ss_pred             hcccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 010855          122 YKKWIDYYCSQSFQESALQTEELLDKLSVLLTGEELEVIKKL  163 (499)
Q Consensus       122 Y~~WI~~y~s~~f~~~~~~~~~~ld~l~~~~~~~e~~~~~~~  163 (499)
                      --.+..++..++-...-..+.+.||.+.  .++++++++.+-
T Consensus       151 ~~~fy~f~~~~~~~~~k~~~r~~l~~~~--~~~~~~~~ii~e  190 (207)
T d1wzda1         151 ALGFYHFEGIAKLKVYKDEYREKLNNLE--LSDEQREHLLKE  190 (207)
T ss_dssp             GCGGGCCTTCSCHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred             CccccccCCcCCHHHHHHHHHHHHhccC--CCHHHHHHHHHH
Confidence            1123333443444455566777888763  677776666543

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=82.49  E-value=0.22  Score=44.20  Aligned_cols=18  Identities=28%  Similarity=0.268  Sum_probs=14.9

Q ss_pred             CceEEEEeCCcccccccc
Q 010855          197 GHLTLFCDFDWTCTAFDS  214 (499)
Q Consensus       197 ~~~~ii~DFD~TIT~~DT  214 (499)
                      ++++|++|+||||+..+.
T Consensus         2 ~~~li~~DlDGTL~~~~~   19 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGDQQ   19 (244)
T ss_dssp             CSEEEEECTBTTTBSCHH
T ss_pred             CceEEEEECcccCCCCCC
Confidence            467999999999997653

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=81.21  E-value=0.73  Score=41.19  Aligned_cols=42  Identities=14%  Similarity=0.273  Sum_probs=32.6

Q ss_pred             HHHHHHHHhhcCCCCCceEEEEcCCc-ccHHHHHhcCc-cEEEcC
Q 010855          397 LQAFNDILKDHSNDEQNLTVYIGGSP-GDLLCLLEADI-GIVIGS  439 (499)
Q Consensus       397 ~~~l~~~~~~~~~~~~~~vIyiGDs~-tDl~~l~~Adi-giv~~~  439 (499)
                      ...+...++..+.+ +.++++|||+. +|+.+++.||+ .|+|..
T Consensus       183 p~~~~~al~~l~i~-~~~~~mIGDs~~~DI~gA~~aG~~si~V~~  226 (253)
T d1wvia_         183 AVIMNKALDRLGVK-RHEAIMVGDNYLTDITAGIKNDIATLLVTT  226 (253)
T ss_dssp             HHHHHHHHHHHTSC-GGGEEEEESCTTTTHHHHHHTTCEEEEESS
T ss_pred             cccceehhhhcccc-ccceEEEcCChHHHHHHHHHCCCCEEEECC
Confidence            56666666666663 57899999995 59999999998 677643