Citrus Sinensis ID: 010902
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 498 | ||||||
| 224109226 | 500 | predicted protein [Populus trichocarpa] | 0.987 | 0.984 | 0.725 | 0.0 | |
| 356499175 | 501 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.980 | 0.694 | 0.0 | |
| 356553749 | 502 | PREDICTED: uncharacterized protein LOC10 | 0.987 | 0.980 | 0.684 | 0.0 | |
| 255559565 | 497 | conserved hypothetical protein [Ricinus | 0.987 | 0.989 | 0.723 | 0.0 | |
| 225448580 | 496 | PREDICTED: uncharacterized protein LOC10 | 0.987 | 0.991 | 0.707 | 0.0 | |
| 357492853 | 496 | hypothetical protein MTR_5g083500 [Medic | 0.977 | 0.981 | 0.672 | 0.0 | |
| 357461437 | 495 | hypothetical protein MTR_3g071950 [Medic | 0.979 | 0.985 | 0.630 | 0.0 | |
| 297823967 | 496 | hypothetical protein ARALYDRAFT_483093 [ | 0.983 | 0.987 | 0.612 | 1e-179 | |
| 30688255 | 496 | uncharacterized protein [Arabidopsis tha | 0.983 | 0.987 | 0.608 | 1e-177 | |
| 21805727 | 496 | hypothetical protein [Arabidopsis thalia | 0.983 | 0.987 | 0.606 | 1e-176 |
| >gi|224109226|ref|XP_002315128.1| predicted protein [Populus trichocarpa] gi|222864168|gb|EEF01299.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/495 (72%), Positives = 416/495 (84%), Gaps = 3/495 (0%)
Query: 5 CCFPDMFDWIQNLPSITQGK-TNSISICICSTSSSQPSLNLFVTKNLQSPSLIFSIAADF 63
CC+PD+ WIQNLP IT+ K N +SICICS+ S QPSLNL V KNLQSP++ FSI AD
Sbjct: 4 CCYPDVLAWIQNLPPITRWKEKNPLSICICSSGSFQPSLNLSVAKNLQSPTISFSIIADL 63
Query: 64 SVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDS- 122
++PISLWSSK K NPKS KLL ++TISSL N IEDVL Y N + ++S K LK DS
Sbjct: 64 NLPISLWSSKPIKTNPKSLKLLDDETISSLSINLIEDVLGYASNKSCSSST-KVLKTDSV 122
Query: 123 MSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNL 182
+S+ KD FNLAFLTL LICIYEAPADLRS CL ++KN+L Q R ASK LMK +GSNL
Sbjct: 123 LSHLKDTFNLAFLTLSLLICIYEAPADLRSECLASLKNQLTDSQLRGASKSLMKIMGSNL 182
Query: 183 EEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSS 242
EEQWMRS+NLAITNWI ELQA+H T+ TPSPLFSY+ ST GLWK+ L+CPVIAMDI SSS
Sbjct: 183 EEQWMRSLNLAITNWIAELQASHHTLKTPSPLFSYSFSTPGLWKVQLYCPVIAMDIESSS 242
Query: 243 NPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERG 302
NP ERLLFSL YHQLE VIQFNYKVI+QE WV++++N DNIRCD++RLVN+TLM E+G
Sbjct: 243 NPPAHERLLFSLKYHQLECVIQFNYKVIVQENWVDVIVNTDNIRCDVVRLVNETLMTEQG 302
Query: 303 VGVDEKHFPSRISLQLTPTMQTNILSVSVSKSSENPTREIEIEKTIEGSFDPPNSFLGLK 362
G DEKHFPSRISL LTP +QTNI+SVSV KSS NPTREIE+EK IE SFDPPNSFLGLK
Sbjct: 303 AGTDEKHFPSRISLHLTPILQTNIISVSVGKSSANPTREIEMEKGIETSFDPPNSFLGLK 362
Query: 363 VSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDR 422
VSAGET ++S+KPWKFEQSVYG SAI+NWFLHD+MDGREVFS+KP + AL+ PKAWFK+R
Sbjct: 363 VSAGETVSMSLKPWKFEQSVYGTSAIMNWFLHDNMDGREVFSNKPPRTALIKPKAWFKNR 422
Query: 423 YSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYN 482
YSS+YRPFTRQGGVIFAGDEYG+ V WK DKS G+TMEWEI+GWIWLTYWPNK+RT Y+
Sbjct: 423 YSSSYRPFTRQGGVIFAGDEYGKSVQWKVDKSTMGKTMEWEIKGWIWLTYWPNKYRTAYS 482
Query: 483 ETRRLEFREIIHLNI 497
ETRRL+F+EI+HL+I
Sbjct: 483 ETRRLQFKEILHLSI 497
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356499175|ref|XP_003518418.1| PREDICTED: uncharacterized protein LOC100782905 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356553749|ref|XP_003545215.1| PREDICTED: uncharacterized protein LOC100809574 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255559565|ref|XP_002520802.1| conserved hypothetical protein [Ricinus communis] gi|223539933|gb|EEF41511.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225448580|ref|XP_002278107.1| PREDICTED: uncharacterized protein LOC100263842 [Vitis vinifera] gi|297736543|emb|CBI25414.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357492853|ref|XP_003616715.1| hypothetical protein MTR_5g083500 [Medicago truncatula] gi|355518050|gb|AES99673.1| hypothetical protein MTR_5g083500 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357461437|ref|XP_003601000.1| hypothetical protein MTR_3g071950 [Medicago truncatula] gi|355490048|gb|AES71251.1| hypothetical protein MTR_3g071950 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297823967|ref|XP_002879866.1| hypothetical protein ARALYDRAFT_483093 [Arabidopsis lyrata subsp. lyrata] gi|297325705|gb|EFH56125.1| hypothetical protein ARALYDRAFT_483093 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|30688255|ref|NP_181570.2| uncharacterized protein [Arabidopsis thaliana] gi|50058939|gb|AAT69214.1| hypothetical protein At2g40390 [Arabidopsis thaliana] gi|330254727|gb|AEC09821.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|21805727|gb|AAM76762.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 498 | ||||||
| TAIR|locus:2063130 | 496 | AT2G40390 "AT2G40390" [Arabido | 0.987 | 0.991 | 0.598 | 2.7e-164 | |
| TAIR|locus:2173328 | 502 | AT5G64190 "AT5G64190" [Arabido | 0.981 | 0.974 | 0.562 | 1.2e-150 | |
| TAIR|locus:2055807 | 526 | AT2G15020 "AT2G15020" [Arabido | 0.618 | 0.585 | 0.293 | 3.9e-37 |
| TAIR|locus:2063130 AT2G40390 "AT2G40390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1599 (567.9 bits), Expect = 2.7e-164, P = 2.7e-164
Identities = 299/500 (59%), Positives = 382/500 (76%)
Query: 1 MATPCCFPDMFDWIQNLPSITQGKTNXXXXXXXXXXXXQPSLNLFVTKNLQSPSLI-FSI 59
MA+ C PD F W+Q LP ++ K N PSLN +T+ QSP+ FSI
Sbjct: 1 MAS-CDTPDAFAWLQTLPPLSLWKGNLMSMCICSPNSSHPSLNFTLTRTPQSPNFFTFSI 59
Query: 60 AADFSVPISLWSSKAFK-INPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFL 118
A+F PI+L+ SK F+ I+ S+ L E+ IS+LL F++ VLNY N + ++
Sbjct: 60 VANFKTPITLFISKTFRTISTNSTTFLNENVISTLLMGFVDVVLNY--NVKRTTCSIQLQ 117
Query: 119 KFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQL 178
S SN KD+FNLAF T +FLICIYEAP LR+ CL T+K++L C+ R SKLLM QL
Sbjct: 118 NLGSTSNLKDVFNLAFFTFVFLICIYEAPTSLRTTCLKTVKDQLVTCRSRQGSKLLMVQL 177
Query: 179 GSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDI 238
GSNLEEQWMRS+NLAITNWI+E++A + +PSPLFSYA ST GLWK+H++CPV+AM++
Sbjct: 178 GSNLEEQWMRSLNLAITNWIIEIKAFQH-LKSPSPLFSYAFSTQGLWKVHMYCPVVAMEM 236
Query: 239 VSSSNPSL-DERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTL 297
S N SL DERL FSLNYHQLEGVIQ N+++ ++EKW N+ +NIDN+RCDIIRLVN+ L
Sbjct: 237 -ESVNSSLNDERLFFSLNYHQLEGVIQLNHRIYVREKWFNVAVNIDNVRCDIIRLVNEKL 295
Query: 298 MNERGVGVDEKHFPSRISLQLTPTMQTNILSVSVSKSSENPTREIEIEKTIEGSFDPPNS 357
++ERG+G +EKHFPSRISLQLTPT Q+NIL VSV KSSENP E E+EK IE + DPPN+
Sbjct: 296 LSERGMGTEEKHFPSRISLQLTPTNQSNILMVSVQKSSENPLTEFEVEKGIEATIDPPNT 355
Query: 358 FLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKA 417
F GLKVSA ETTT SMKPWKFE+ V+GYSA L WFLHD DGREV SSKP+K++++NP+A
Sbjct: 356 FFGLKVSANETTTKSMKPWKFEEWVHGYSANLTWFLHDLDDGREVSSSKPSKVSMMNPRA 415
Query: 418 WFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKH 477
WFK+RYSSA+RPFT+QGGV+FAGD YG+ V WK DK+ G+ ME+E++G +WLTYWPNKH
Sbjct: 416 WFKNRYSSAFRPFTKQGGVVFAGDSYGQSVLWKVDKTAIGKVMEFEVKGCVWLTYWPNKH 475
Query: 478 RTFYNETRRLEFREIIHLNI 497
TFY++TR+LEF+E+++LN+
Sbjct: 476 HTFYSDTRKLEFKEMLYLNL 495
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| TAIR|locus:2173328 AT5G64190 "AT5G64190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2055807 AT2G15020 "AT2G15020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 498 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 47.5 bits (112), Expect = 1e-05
Identities = 58/315 (18%), Positives = 95/315 (30%), Gaps = 113/315 (35%)
Query: 52 SPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKN 111
+P + IA ++ W + K + D +++++ + + VL P +
Sbjct: 326 NPRRLSIIAESIRDGLATW---------DNWKHVNCDKLTTIIESSLN-VLE--PAEYRK 373
Query: 112 NSLLKFLKFDSMSNFKDIFNL--AFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRA 169
FD +S F ++ L+L++ I + N+L
Sbjct: 374 M-------FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV--------VVNKLH------ 412
Query: 170 ASKLLMKQLGSNLEEQWMR------SINLAITNWILELQATHRTI--------------T 209
L +E+Q SI L + + A HR+I
Sbjct: 413 -KYSL-------VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 210 TPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERL-LFS---LNYHQLEG---- 261
P L Y S G HL N ER+ LF L++ LE
Sbjct: 465 IPPYLDQYFYSHIGH---HL------------KNIEHPERMTLFRMVFLDFRFLEQKIRH 509
Query: 262 --------------VIQF-NYKVIIQ------EKWVNLMLNI------DNIRCDIIRLVN 294
+ Q YK I E+ VN +L+ + I L+
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR 569
Query: 295 KTLMNERGVGVDEKH 309
LM E +E H
Sbjct: 570 IALMAEDEAIFEEAH 584
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00