Citrus Sinensis ID: 010902


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
MATPCCFPDMFDWIQNLPSITQGKTNSISICICSTSSSQPSLNLFVTKNLQSPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERGVGVDEKHFPSRISLQLTPTMQTNILSVSVSKSSENPTREIEIEKTIEGSFDPPNSFLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYNETRRLEFREIIHLNIA
ccccccccHHHHHHHccccccccccccEEEEEcccccccccEEEEEEEccccccEEEEEEEcccccEEEEEcccEEccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHccccEEEEEEEEEEEEEEccccccccccHHccccccccEEEEEEEEEEEEEEEEcEEEEEEEEEEEEEEEEEEHHHHHHccccccccccccccEEEEEEEcEEcccEEEEEEEEccccccEEEEEEEEEEEcccccccccEEEEEEEEEcccccccccEEEcccccEEEEEEEEccccccEEEEEcccccccccccccccccccccccccccccccEEEEccccccEEEEEEcccccccEEEEEEEEEEEEEEEccccccEEEEEEEEccccccccccc
cccccccccHHHHHHccccccccccccEEEEEEccccccccEEEEEEEcccccEEEEEEEEEccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccccccEEcccccccccHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccEEEEEEEcEEEEEEccccccccHHHHHHHHHHHcEEEEEEEEEEEEEEcccEEEEEEEEccEEEEHHHHHHHHHHccccccccccccccEEEEEEEccccccEEEEEEEccccccEEEEEEEEEEEEEcccccccccEEEEEcEEEEEEccccEEEEccccccEEEEEEEEcccccEEEEccccccccccccHHHHcccccccccccccccEEEEEccccccEEEEEEccHccccEEEEEEEEEEEEEEcccccccEEEEEEEEEEHHHcccccc
matpccfpdmfdwiqnlpsitqgktnsISICicstsssqpslnlfvtknlqspslIFSIAADFsvpislwsskafkinpksskllqEDTISSLLTNFIEDVlnygpnsaknnSLLKflkfdsmsnfKDIFNLAFLTLLFLICIYeapadlrsGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWILELQAthrtittpsplfSYALSTFGlwkihlfcpviamdivsssnpsldeRLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLmnergvgvdekhfpsrislqltptmqTNILSVSVskssenptreieiektiegsfdppnsflglkvsagetttlsmkpwkfeqsVYGYSAILNWFlhdsmdgrevfsskpakmallnpkawfkdryssayrpftrqggvifagdeygerVWWKFDKSVAGRTMEWEIRGWIWLtywpnkhrtfyneTRRLEFREIIHLNIA
MATPCCFPDMFDWIQNLPSITQGKTNSISICICSTSSSQPSLNLFVTKNLQSPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNErgvgvdekhfpsrislqltptmqTNILSvsvskssenptrEIEIektiegsfdppnSFLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYNETRRLEFREIIHLNIA
MATPCCFPDMFDWIQNLPSITQGKTNsisicicstsssQPSLNLFVTKNLQSPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERGVGVDEKHFPSRISLQLTPTMQTNILSVSVSKSSENPTREIEIEKTIEGSFDPPNSFLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYNETRRLEFREIIHLNIA
****CCFPDMFDWIQNLPSITQGKTNSISICICSTSSSQPSLNLFVTKNLQSPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERGVGVDEKHFPSRISLQL***************************************FLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYNETRRLEFREIIHLN**
****CCFPDMFDWIQNLPSITQGKTNSISICI********************PSLIFSIAADFSVPISLWSSKAF************DTISSLLTNFIEDVLNYGPNS**************MSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWIL**************LFSYALSTFGLWKIHLFCPVIAM***************FSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERGVGVDEKHFPSRISLQLTPTMQTNI**************************************************KFEQSVYGYSAILNWFLHDSMDGRE********************RYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYNETRRLEFREIIHLNIA
MATPCCFPDMFDWIQNLPSITQGKTNSISICICSTSSSQPSLNLFVTKNLQSPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERGVGVDEKHFPSRISLQLTPTMQTNILSV**********REIEIEKTIEGSFDPPNSFLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYNETRRLEFREIIHLNIA
***PCCFPDMFDWIQNLPSITQGKTNSISICICSTSSSQPSLNLFVTKNLQSPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERGVGVDEKHFPSRISLQLTPTMQTNILSVSVSKSSENPTREIEIEKTIEGSFDPPNSFLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYNETRRLEFREIIHLNIA
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oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATPCCFPDMFDWIQNLPSITQGKTNSISICICSTSSSQPSLNLFVTKNLQSPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERGVGVDEKHFPSRISLQLTPTMQTNILSVSVSKSSENPTREIEIEKTIEGSFDPPNSFLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYNETRRLEFREIIHLNIA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query498
224109226500 predicted protein [Populus trichocarpa] 0.987 0.984 0.725 0.0
356499175501 PREDICTED: uncharacterized protein LOC10 0.985 0.980 0.694 0.0
356553749502 PREDICTED: uncharacterized protein LOC10 0.987 0.980 0.684 0.0
255559565497 conserved hypothetical protein [Ricinus 0.987 0.989 0.723 0.0
225448580496 PREDICTED: uncharacterized protein LOC10 0.987 0.991 0.707 0.0
357492853496 hypothetical protein MTR_5g083500 [Medic 0.977 0.981 0.672 0.0
357461437495 hypothetical protein MTR_3g071950 [Medic 0.979 0.985 0.630 0.0
297823967496 hypothetical protein ARALYDRAFT_483093 [ 0.983 0.987 0.612 1e-179
30688255496 uncharacterized protein [Arabidopsis tha 0.983 0.987 0.608 1e-177
21805727496 hypothetical protein [Arabidopsis thalia 0.983 0.987 0.606 1e-176
>gi|224109226|ref|XP_002315128.1| predicted protein [Populus trichocarpa] gi|222864168|gb|EEF01299.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/495 (72%), Positives = 416/495 (84%), Gaps = 3/495 (0%)

Query: 5   CCFPDMFDWIQNLPSITQGK-TNSISICICSTSSSQPSLNLFVTKNLQSPSLIFSIAADF 63
           CC+PD+  WIQNLP IT+ K  N +SICICS+ S QPSLNL V KNLQSP++ FSI AD 
Sbjct: 4   CCYPDVLAWIQNLPPITRWKEKNPLSICICSSGSFQPSLNLSVAKNLQSPTISFSIIADL 63

Query: 64  SVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFLKFDS- 122
           ++PISLWSSK  K NPKS KLL ++TISSL  N IEDVL Y  N + ++S  K LK DS 
Sbjct: 64  NLPISLWSSKPIKTNPKSLKLLDDETISSLSINLIEDVLGYASNKSCSSST-KVLKTDSV 122

Query: 123 MSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQLGSNL 182
           +S+ KD FNLAFLTL  LICIYEAPADLRS CL ++KN+L   Q R ASK LMK +GSNL
Sbjct: 123 LSHLKDTFNLAFLTLSLLICIYEAPADLRSECLASLKNQLTDSQLRGASKSLMKIMGSNL 182

Query: 183 EEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSS 242
           EEQWMRS+NLAITNWI ELQA+H T+ TPSPLFSY+ ST GLWK+ L+CPVIAMDI SSS
Sbjct: 183 EEQWMRSLNLAITNWIAELQASHHTLKTPSPLFSYSFSTPGLWKVQLYCPVIAMDIESSS 242

Query: 243 NPSLDERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTLMNERG 302
           NP   ERLLFSL YHQLE VIQFNYKVI+QE WV++++N DNIRCD++RLVN+TLM E+G
Sbjct: 243 NPPAHERLLFSLKYHQLECVIQFNYKVIVQENWVDVIVNTDNIRCDVVRLVNETLMTEQG 302

Query: 303 VGVDEKHFPSRISLQLTPTMQTNILSVSVSKSSENPTREIEIEKTIEGSFDPPNSFLGLK 362
            G DEKHFPSRISL LTP +QTNI+SVSV KSS NPTREIE+EK IE SFDPPNSFLGLK
Sbjct: 303 AGTDEKHFPSRISLHLTPILQTNIISVSVGKSSANPTREIEMEKGIETSFDPPNSFLGLK 362

Query: 363 VSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKAWFKDR 422
           VSAGET ++S+KPWKFEQSVYG SAI+NWFLHD+MDGREVFS+KP + AL+ PKAWFK+R
Sbjct: 363 VSAGETVSMSLKPWKFEQSVYGTSAIMNWFLHDNMDGREVFSNKPPRTALIKPKAWFKNR 422

Query: 423 YSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKHRTFYN 482
           YSS+YRPFTRQGGVIFAGDEYG+ V WK DKS  G+TMEWEI+GWIWLTYWPNK+RT Y+
Sbjct: 423 YSSSYRPFTRQGGVIFAGDEYGKSVQWKVDKSTMGKTMEWEIKGWIWLTYWPNKYRTAYS 482

Query: 483 ETRRLEFREIIHLNI 497
           ETRRL+F+EI+HL+I
Sbjct: 483 ETRRLQFKEILHLSI 497




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499175|ref|XP_003518418.1| PREDICTED: uncharacterized protein LOC100782905 [Glycine max] Back     alignment and taxonomy information
>gi|356553749|ref|XP_003545215.1| PREDICTED: uncharacterized protein LOC100809574 [Glycine max] Back     alignment and taxonomy information
>gi|255559565|ref|XP_002520802.1| conserved hypothetical protein [Ricinus communis] gi|223539933|gb|EEF41511.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|225448580|ref|XP_002278107.1| PREDICTED: uncharacterized protein LOC100263842 [Vitis vinifera] gi|297736543|emb|CBI25414.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357492853|ref|XP_003616715.1| hypothetical protein MTR_5g083500 [Medicago truncatula] gi|355518050|gb|AES99673.1| hypothetical protein MTR_5g083500 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357461437|ref|XP_003601000.1| hypothetical protein MTR_3g071950 [Medicago truncatula] gi|355490048|gb|AES71251.1| hypothetical protein MTR_3g071950 [Medicago truncatula] Back     alignment and taxonomy information
>gi|297823967|ref|XP_002879866.1| hypothetical protein ARALYDRAFT_483093 [Arabidopsis lyrata subsp. lyrata] gi|297325705|gb|EFH56125.1| hypothetical protein ARALYDRAFT_483093 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30688255|ref|NP_181570.2| uncharacterized protein [Arabidopsis thaliana] gi|50058939|gb|AAT69214.1| hypothetical protein At2g40390 [Arabidopsis thaliana] gi|330254727|gb|AEC09821.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21805727|gb|AAM76762.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query498
TAIR|locus:2063130496 AT2G40390 "AT2G40390" [Arabido 0.987 0.991 0.598 2.7e-164
TAIR|locus:2173328502 AT5G64190 "AT5G64190" [Arabido 0.981 0.974 0.562 1.2e-150
TAIR|locus:2055807526 AT2G15020 "AT2G15020" [Arabido 0.618 0.585 0.293 3.9e-37
TAIR|locus:2063130 AT2G40390 "AT2G40390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1599 (567.9 bits), Expect = 2.7e-164, P = 2.7e-164
 Identities = 299/500 (59%), Positives = 382/500 (76%)

Query:     1 MATPCCFPDMFDWIQNLPSITQGKTNXXXXXXXXXXXXQPSLNLFVTKNLQSPSLI-FSI 59
             MA+ C  PD F W+Q LP ++  K N             PSLN  +T+  QSP+   FSI
Sbjct:     1 MAS-CDTPDAFAWLQTLPPLSLWKGNLMSMCICSPNSSHPSLNFTLTRTPQSPNFFTFSI 59

Query:    60 AADFSVPISLWSSKAFK-INPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKNNSLLKFL 118
              A+F  PI+L+ SK F+ I+  S+  L E+ IS+LL  F++ VLNY  N  +    ++  
Sbjct:    60 VANFKTPITLFISKTFRTISTNSTTFLNENVISTLLMGFVDVVLNY--NVKRTTCSIQLQ 117

Query:   119 KFDSMSNFKDIFNLAFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRAASKLLMKQL 178
                S SN KD+FNLAF T +FLICIYEAP  LR+ CL T+K++L  C+ R  SKLLM QL
Sbjct:   118 NLGSTSNLKDVFNLAFFTFVFLICIYEAPTSLRTTCLKTVKDQLVTCRSRQGSKLLMVQL 177

Query:   179 GSNLEEQWMRSINLAITNWILELQATHRTITTPSPLFSYALSTFGLWKIHLFCPVIAMDI 238
             GSNLEEQWMRS+NLAITNWI+E++A    + +PSPLFSYA ST GLWK+H++CPV+AM++
Sbjct:   178 GSNLEEQWMRSLNLAITNWIIEIKAFQH-LKSPSPLFSYAFSTQGLWKVHMYCPVVAMEM 236

Query:   239 VSSSNPSL-DERLLFSLNYHQLEGVIQFNYKVIIQEKWVNLMLNIDNIRCDIIRLVNKTL 297
               S N SL DERL FSLNYHQLEGVIQ N+++ ++EKW N+ +NIDN+RCDIIRLVN+ L
Sbjct:   237 -ESVNSSLNDERLFFSLNYHQLEGVIQLNHRIYVREKWFNVAVNIDNVRCDIIRLVNEKL 295

Query:   298 MNERGVGVDEKHFPSRISLQLTPTMQTNILSVSVSKSSENPTREIEIEKTIEGSFDPPNS 357
             ++ERG+G +EKHFPSRISLQLTPT Q+NIL VSV KSSENP  E E+EK IE + DPPN+
Sbjct:   296 LSERGMGTEEKHFPSRISLQLTPTNQSNILMVSVQKSSENPLTEFEVEKGIEATIDPPNT 355

Query:   358 FLGLKVSAGETTTLSMKPWKFEQSVYGYSAILNWFLHDSMDGREVFSSKPAKMALLNPKA 417
             F GLKVSA ETTT SMKPWKFE+ V+GYSA L WFLHD  DGREV SSKP+K++++NP+A
Sbjct:   356 FFGLKVSANETTTKSMKPWKFEEWVHGYSANLTWFLHDLDDGREVSSSKPSKVSMMNPRA 415

Query:   418 WFKDRYSSAYRPFTRQGGVIFAGDEYGERVWWKFDKSVAGRTMEWEIRGWIWLTYWPNKH 477
             WFK+RYSSA+RPFT+QGGV+FAGD YG+ V WK DK+  G+ ME+E++G +WLTYWPNKH
Sbjct:   416 WFKNRYSSAFRPFTKQGGVVFAGDSYGQSVLWKVDKTAIGKVMEFEVKGCVWLTYWPNKH 475

Query:   478 RTFYNETRRLEFREIIHLNI 497
              TFY++TR+LEF+E+++LN+
Sbjct:   476 HTFYSDTRKLEFKEMLYLNL 495




GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2173328 AT5G64190 "AT5G64190" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055807 AT2G15020 "AT2G15020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query498
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.5 bits (112), Expect = 1e-05
 Identities = 58/315 (18%), Positives = 95/315 (30%), Gaps = 113/315 (35%)

Query: 52  SPSLIFSIAADFSVPISLWSSKAFKINPKSSKLLQEDTISSLLTNFIEDVLNYGPNSAKN 111
           +P  +  IA      ++ W          + K +  D +++++ + +  VL   P   + 
Sbjct: 326 NPRRLSIIAESIRDGLATW---------DNWKHVNCDKLTTIIESSLN-VLE--PAEYRK 373

Query: 112 NSLLKFLKFDSMSNFKDIFNL--AFLTLLFLICIYEAPADLRSGCLNTIKNELAGCQPRA 169
                   FD +S F    ++    L+L++   I              + N+L       
Sbjct: 374 M-------FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV--------VVNKLH------ 412

Query: 170 ASKLLMKQLGSNLEEQWMR------SINLAITNWILELQATHRTI--------------T 209
               L       +E+Q         SI L +   +    A HR+I               
Sbjct: 413 -KYSL-------VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464

Query: 210 TPSPLFSYALSTFGLWKIHLFCPVIAMDIVSSSNPSLDERL-LFS---LNYHQLEG---- 261
            P  L  Y  S  G    HL             N    ER+ LF    L++  LE     
Sbjct: 465 IPPYLDQYFYSHIGH---HL------------KNIEHPERMTLFRMVFLDFRFLEQKIRH 509

Query: 262 --------------VIQF-NYKVIIQ------EKWVNLMLNI------DNIRCDIIRLVN 294
                         + Q   YK  I       E+ VN +L+       + I      L+ 
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR 569

Query: 295 KTLMNERGVGVDEKH 309
             LM E     +E H
Sbjct: 570 IALMAEDEAIFEEAH 584


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00