Citrus Sinensis ID: 010939

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------

MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR

cHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccccHHHHHHHHHHHcccccEEEEEccccccHHHHHHccccccccEEEEEcccccccccccccccccccHHHHHHHHHcccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHHHHccccHHHHHccEEEEccccccccccccccccccccccccccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHHcccccEEEEcccccccccccHHHHHHHccccEEEEEcccccccEEccEEEcccccccEEEcccHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccc

HHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHcccHHHHHHHcHHHHccccccEEEEHHHcccHHHHHcccccccccEEEEEccccEcccEccHHHHHHHHHHHHHHHHHHHcccHHHEEEEEEEcccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHHccccccHHHHHHHEEEEccccEEEcccccccHHHHHHccEcccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHccccHHHHHHccccccEEEEccccccEEEccEEEccEEccHHHcHHHHHHHHHHHcEccccHHHHHHHHHHHHHcccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccEccccccccHHHHHHHHcccccccccc

mlhnirqyQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELlpivytptvgeACQKygsiysrpqgvfislKDKGKVLEVLRNWPEKNIQVIVVTdgerilglgdlgchgmgipvgKLSLYTalggirpsaclpvtidvgtnnekllddefYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYgtthlvfnddiqGTASVVLAGLISAMKflggsladqRFLFLGAGEAGTGIAELIALEIskqtnmpleetrkKIWLVDSKGLIVSSRLESlqhfkkpwahehepVKELVDAVnaikptiligtsgqgrTFTKEVVEAMASLnekpiifslsnptsqsectaeeayTWSQgraifasgspfdpfeygdnvfvpgqannayifpglglglimsgairVHDDMLLAAAEALAGQVtqenfdkgllyppfknIRKISAHIAAEVAAKAYELGlatrlpppkdlVKYAescmyspayrtyr

mlhnirqyqvPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVlrnwpekniqviVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEIskqtnmpleetrkkiwlvDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTiligtsgqgrTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGlatrlpppkdlvkyaescmyspayrtyr

MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMllaaaealaGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR

******QYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSL********CTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYS*******

MLH****YQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR

MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS************AYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		497	2.2.26 [Sep-21-2011]
P36444		647	NADP-dependent malic enzy	N/A	no	1.0	0.768	0.837	0.0
P51615		591	NADP-dependent malic enzy	no	no	1.0	0.840	0.830	0.0
P22178		648	NADP-dependent malic enzy	N/A	no	1.0	0.766	0.829	0.0
Q9CA83		646	NADP-dependent malic enzy	yes	no	1.0	0.769	0.830	0.0
P43279		639	NADP-dependent malic enzy	no	no	1.0	0.777	0.800	0.0
P37223		585	NADP-dependent malic enzy	N/A	no	1.0	0.849	0.814	0.0
P12628		589	NADP-dependent malic enzy	N/A	no	1.0	0.843	0.824	0.0
Q9XGZ0		588	NADP-dependent malic enzy	no	no	1.0	0.845	0.812	0.0
P34105		591	NADP-dependent malic enzy	no	no	1.0	0.840	0.826	0.0
P37222		573	NADP-dependent malic enzy	N/A	no	0.995	0.863	0.810	0.0

>sp\|P36444\|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1	Back alignment and function desciption

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/497 (83%), Positives = 465/497 (93%)

Query: 1   MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIY 60
           M+HNIRQY+VPLQ+Y AMMDLQERN++LFYKLLI+N+EELLPIVYTPTVGEACQKYG+I+
Sbjct: 151 MMHNIRQYEVPLQRYQAMMDLQERNERLFYKLLIENIEELLPIVYTPTVGEACQKYGTIF 210

Query: 61  SRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLY 120
             PQG++ISLKDKGKVLE+L+NWP+K IQVIVVTDGERILGLGDLGC GMGIPVGKLSLY
Sbjct: 211 KNPQGLYISLKDKGKVLEILKNWPQKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLY 270

Query: 121 TALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYG 180
           TALGGIRPSACLP+TIDVGTNNEK+L+DEFYIGLRQ+RA G+EYAEL++EFM+AVKQNYG
Sbjct: 271 TALGGIRPSACLPITIDVGTNNEKMLNDEFYIGLRQRRASGKEYAELMNEFMSAVKQNYG 330

Query: 181 ERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRF 240
           E++LIQFEDFANHNAFDLLEKY TTHLVFNDDIQGTASVVLAGLISA+K +GGSLAD +F
Sbjct: 331 EKVLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLAGLISALKLVGGSLADHKF 390

Query: 241 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300
           LFLGAGEAGTGIAELIALEISKQTN PLEETRKKIWLVDSKGLIV SRL+SLQHFKKPWA
Sbjct: 391 LFLGAGEAGTGIAELIALEISKQTNAPLEETRKKIWLVDSKGLIVRSRLDSLQHFKKPWA 450

Query: 301 HEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSEC 360
           H+HEPV + +DAV AIKPT+LIG+SG G+TFTKEVVEAM+S NEKPII +LSNPTSQSEC
Sbjct: 451 HDHEPVNKFLDAVKAIKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSEC 510

Query: 361 TAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDD 420
           TAE+AYTWS+GR IFASGSPF P EY   V+V GQ+NNAYIFPG GLGLI+SGAIRVHD+
Sbjct: 511 TAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDE 570

Query: 421 MLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDL 480
           MLLAA+EALA QVTQE+FD GL+YPPF NIRKISAHIAA+VAAKAYELGLA+RLP P++L
Sbjct: 571 MLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENL 630

Query: 481 VKYAESCMYSPAYRTYR 497
           V YAESCMYSP YR YR
Sbjct: 631 VAYAESCMYSPKYRNYR 647

The chloroplastic ME isoform decarboxylates malate shuttled from neighboring mesophyll cells. The CO(2) released is then refixed by ribulose-bisphosphate carboxylase. This pathway eliminates the photorespiratory loss of CO(2) that occurs in most plants.
Flaveria pringlei (taxid: 4226)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 0

>sp\|P51615\|MAOX_VITVI NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1	Back alignment and function description

>sp\|P22178\|MAOC_FLATR NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1	Back alignment and function description

>sp\|Q9CA83\|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic OS=Arabidopsis thaliana GN=NADP-ME4 PE=1 SV=1	Back alignment and function description

>sp\|P43279\|MAOC_ORYSJ NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2	Back alignment and function description

>sp\|P37223\|MAOX_MESCR NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1	Back alignment and function description

>sp\|P12628\|MAOX_PHAVU NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1	Back alignment and function description

>sp\|Q9XGZ0\|MAOP3_ARATH NADP-dependent malic enzyme 3 OS=Arabidopsis thaliana GN=NADP-ME3 PE=1 SV=1	Back alignment and function description

>sp\|P34105\|MAOX_POPTR NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3	Back alignment and function description

>sp\|P37222\|MAOC_SOLLC NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		497
390533881		645	NADP-dependent malic protein [Dimocarpus	1.0	0.770	0.893	0.0
255549832		641	malic enzyme, putative [Ricinus communis	1.0	0.775	0.881	0.0
8118507		641	NADP-dependent malic protein [Ricinus co	1.0	0.775	0.879	0.0
449466139		647	PREDICTED: NADP-dependent malic enzyme,	1.0	0.768	0.867	0.0
1561774		640	malate dehydrogenase [Vitis vinifera]	1.0	0.776	0.859	0.0
225442481		640	PREDICTED: NADP-dependent malic enzyme [	1.0	0.776	0.857	0.0
404313448		640	cytosolic NADP-malic protein [Prunus arm	1.0	0.776	0.859	0.0
339958975		640	NADP-dependent malic enzyme [Hylocereus	1.0	0.776	0.855	0.0
118486015		649	unknown [Populus trichocarpa]	1.0	0.765	0.871	0.0
255546341		591	malic enzyme, putative [Ricinus communis	1.0	0.840	0.845	0.0

>gi\|390533881\|gb\|AFM08812.1\| NADP-dependent malic protein [Dimocarpus longan]	Back alignment and taxonomy information

 Score =  943 bits (2438), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/497 (89%), Positives = 477/497 (95%)

Query: 1   MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIY 60
           M+HNIR YQVPLQKYMAMMDLQERNQ+LFYKLL+D+VEELLP+VYTPTVGEACQKYGSI+
Sbjct: 149 MMHNIRNYQVPLQKYMAMMDLQERNQRLFYKLLMDHVEELLPVVYTPTVGEACQKYGSIF 208

Query: 61  SRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLY 120
           +RPQG+FISLK+KGK+LEVLRNWPEKNIQVIVVTDGERILGLGDLGC GMGIPVGKLSLY
Sbjct: 209 NRPQGLFISLKEKGKILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLY 268

Query: 121 TALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYG 180
           TALGG+RPSACLP+TIDVGTNNE LL+DEFYIGLRQKRA GQEYAELLHEFMTAVKQNYG
Sbjct: 269 TALGGVRPSACLPITIDVGTNNETLLNDEFYIGLRQKRATGQEYAELLHEFMTAVKQNYG 328

Query: 181 ERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRF 240
           E+IL+QFEDFANHNAF+LLEKYGTTHLVFNDDIQGTASVVLAGLISAMKF+GGSLADQ+F
Sbjct: 329 EKILVQFEDFANHNAFNLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFVGGSLADQKF 388

Query: 241 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300
           LFLGAGEAGTGIAELIALEISKQTNMP+EE RKK+WLVDSKGLIVSSR ESLQHFKKPWA
Sbjct: 389 LFLGAGEAGTGIAELIALEISKQTNMPVEEARKKVWLVDSKGLIVSSRSESLQHFKKPWA 448

Query: 301 HEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSEC 360
           H+HEPV ELVDAVN IKPTILIGTSG+G+TFTKEVVEAMA+LNEKPII +LSNPTSQSEC
Sbjct: 449 HDHEPVTELVDAVNQIKPTILIGTSGKGKTFTKEVVEAMAALNEKPIILALSNPTSQSEC 508

Query: 361 TAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDD 420
           TAEEAY W+QGRAIFASGSPFDP EY    +VPGQANNAYIFPG GLGLIMSG IRVHDD
Sbjct: 509 TAEEAYNWTQGRAIFASGSPFDPVEYEGKAYVPGQANNAYIFPGFGLGLIMSGTIRVHDD 568

Query: 421 MLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDL 480
           MLLAA+EALA QVT ENF+KGL+YPPFK+IRKISAHIAA+VAAK+YELGLATRLP PKDL
Sbjct: 569 MLLAASEALAEQVTPENFEKGLIYPPFKSIRKISAHIAAKVAAKSYELGLATRLPQPKDL 628

Query: 481 VKYAESCMYSPAYRTYR 497
           VKYAESCMYSPAYRTYR
Sbjct: 629 VKYAESCMYSPAYRTYR 645

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255549832\|ref\|XP_002515967.1\| malic enzyme, putative [Ricinus communis] gi\|223544872\|gb\|EEF46387.1\| malic enzyme, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|8118507\|gb\|AAF73006.1\|AF262997_1 NADP-dependent malic protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|449466139\|ref\|XP_004150784.1\| PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|1561774\|gb\|AAB08874.1\| malate dehydrogenase [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225442481\|ref\|XP_002283814.1\| PREDICTED: NADP-dependent malic enzyme [Vitis vinifera] gi\|297743201\|emb\|CBI36068.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|404313448\|gb\|AFR54473.1\| cytosolic NADP-malic protein [Prunus armeniaca]	Back alignment and taxonomy information

>gi\|339958975\|gb\|AEK25136.1\| NADP-dependent malic enzyme [Hylocereus undatus]	Back alignment and taxonomy information

>gi\|118486015\|gb\|ABK94851.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|255546341\|ref\|XP_002514230.1\| malic enzyme, putative [Ricinus communis] gi\|223546686\|gb\|EEF48184.1\| malic enzyme, putative [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		497
TAIR\|locus:2017854		646	NADP-ME4 "NADP-malic enzyme 4"	1.0	0.769	0.814	1.3e-224
TAIR\|locus:2180547		588	NADP-ME3 "NADP-malic enzyme 3"	1.0	0.845	0.796	1.9e-218
TAIR\|locus:2181980		588	NADP-ME2 "NADP-malic enzyme 2"	1.0	0.845	0.782	2.8e-215
TAIR\|locus:2052045		581	NADP-ME1 "NADP-malic enzyme 1"	1.0	0.855	0.784	3.3e-214
ZFIN\|ZDB-GENE-040801-147		581	me2 "malic enzyme 2, NAD(+)-de	0.987	0.845	0.520	2.7e-139
FB\|FBgn0029155		624	Men-b "Malic enzyme b" [Drosop	0.985	0.785	0.510	1.7e-137
ZFIN\|ZDB-GENE-041111-294		603	me3 "malic enzyme 3, NADP(+)-d	0.993	0.819	0.512	1.7e-137
UNIPROTKB\|E1C7M4		541	ME1 "Malic enzyme" [Gallus gal	0.993	0.913	0.521	2.2e-137
UNIPROTKB\|F1P0Y6		576	ME1 "Malic enzyme" [Gallus gal	0.993	0.857	0.521	2.2e-137
UNIPROTKB\|F1RQM4		569	ME1 "Malic enzyme" [Sus scrofa	0.985	0.861	0.523	1.5e-136

TAIR\|locus:2017854 NADP-ME4 "NADP-malic enzyme 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2168 (768.2 bits), Expect = 1.3e-224, P = 1.3e-224
 Identities = 405/497 (81%), Positives = 457/497 (91%)

Query:     1 MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIY 60
             ++H +RQYQVPLQKYMAMMDLQE N++LFYKLLID+VEELLP++YTPTVGEACQKYGSI+
Sbjct:   150 IMHTLRQYQVPLQKYMAMMDLQETNERLFYKLLIDHVEELLPVIYTPTVGEACQKYGSIF 209

Query:    61 SRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLY 120
              RPQG+FISLK+KGK+ EVLRNWPEKNIQVIVVTDGERILGLGDLGC GMGIPVGKLSLY
Sbjct:   210 LRPQGLFISLKEKGKIHEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLY 269

Query:   121 TALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYG 180
             TALGG+RPSACLPVTIDVGTNNEKLL+DEFYIGLRQ+RA G+EY+EL+HEFMTAVKQNYG
Sbjct:   270 TALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQRRATGEEYSELMHEFMTAVKQNYG 329

Query:   181 ERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRF 240
             E+++IQFEDFANHNAFDLL KYGTTHLVFNDDIQGTASVVLAGLI+A++F+GGSL+D RF
Sbjct:   330 EKVVIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTASVVLAGLIAALRFVGGSLSDHRF 389

Query:   241 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300
             LFLGAGEAGTGIAELIALEISK++++PLEE RK IWLVDSKGLIVSSR ES+QHFKKPWA
Sbjct:   390 LFLGAGEAGTGIAELIALEISKKSHIPLEEARKNIWLVDSKGLIVSSRKESIQHFKKPWA 449

Query:   301 HEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSEC 360
             H+HEP++ELVDAV AIKPT+LIGTSG G+TFT++VVE MA LNEKPII SLSNPTSQSEC
Sbjct:   450 HDHEPIRELVDAVKAIKPTVLIGTSGVGQTFTQDVVETMAKLNEKPIILSLSNPTSQSEC 509

Query:   361 TAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDD 420
             TAEEAYTWSQGRAIFASGSPF P EY    FVPGQANNAYIFPG GLGLIMSG IRVHDD
Sbjct:   510 TAEEAYTWSQGRAIFASGSPFAPVEYEGKTFVPGQANNAYIFPGFGLGLIMSGTIRVHDD 569

Query:   421 MXXXXXXXXXGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDL 480
             M          ++ +E+++KG++YPPF+NIRKISA IAA+VAAKAYELGLATRLP PK+L
Sbjct:   570 MLLAASEALAEELMEEHYEKGMIYPPFRNIRKISARIAAKVAAKAYELGLATRLPQPKEL 629

Query:   481 VKYAESCMYSPAYRTYR 497
              + AES MYSP+YR+YR
Sbjct:   630 EQCAESSMYSPSYRSYR 646

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004470 "malic enzyme activity" evidence=IEA;ISS

GO:0006108 "malate metabolic process" evidence=IEA;ISS;IDA;TAS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0016652 "oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004473 "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity" evidence=IDA

GO:0006633 "fatty acid biosynthetic process" evidence=TAS

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA

GO:0050897 "cobalt ion binding" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

TAIR\|locus:2180547 NADP-ME3 "NADP-malic enzyme 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2181980 NADP-ME2 "NADP-malic enzyme 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2052045 NADP-ME1 "NADP-malic enzyme 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040801-147 me2 "malic enzyme 2, NAD(+)-dependent, mitochondrial" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

FB\|FBgn0029155 Men-b "Malic enzyme b" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-041111-294 me3 "malic enzyme 3, NADP(+)-dependent, mitochondrial" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C7M4 ME1 "Malic enzyme" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P0Y6 ME1 "Malic enzyme" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RQM4 ME1 "Malic enzyme" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A4SKE9	MAO1_AERS4	1, ., 1, ., 1, ., 3, 8	0.4615	0.9698	0.8546	yes	no
O82191	MAOP1_ARATH	1, ., 1, ., 1, ., 4, 0	0.8028	1.0	0.8554	no	no
Q8ZPE8	MAO1_SALTY	1, ., 1, ., 1, ., 3, 8	0.4373	0.9698	0.8530	yes	no
P06801	MAOX_MOUSE	1, ., 1, ., 1, ., 4, 0	0.5222	0.9879	0.8583	yes	no
B5QTN6	MAO1_SALEP	1, ., 1, ., 1, ., 3, 8	0.4353	0.9698	0.8530	yes	no
P28227	MAOX_ANAPL	1, ., 1, ., 1, ., 4, 0	0.5291	0.9939	0.8868	N/A	no
P13697	MAOX_RAT	1, ., 1, ., 1, ., 4, 0	0.5263	0.9879	0.8583	yes	no
Q29558	MAOX_PIG	1, ., 1, ., 1, ., 4, 0	0.5263	0.9879	0.8815	yes	no
B7LQX1	MAO1_ESCF3	1, ., 1, ., 1, ., 3, 8	0.4308	0.9778	0.8601	yes	no
B5RAB4	MAO1_SALG2	1, ., 1, ., 1, ., 3, 8	0.4353	0.9698	0.8530	yes	no
P34105	MAOX_POPTR	1, ., 1, ., 1, ., 4, 0	0.8269	1.0	0.8409	no	no
Q9XGZ0	MAOP3_ARATH	1, ., 1, ., 1, ., 4, 0	0.8128	1.0	0.8452	no	no
B5FHJ6	MAO1_SALDC	1, ., 1, ., 1, ., 3, 8	0.4353	0.9698	0.8530	yes	no
B2U1M1	MAO1_SHIB3	1, ., 1, ., 1, ., 3, 8	0.4328	0.9778	0.8601	yes	no
A9MYU8	MAO1_SALPB	1, ., 1, ., 1, ., 3, 8	0.4373	0.9698	0.8530	yes	no
Q9LYG3	MAOP2_ARATH	1, ., 1, ., 1, ., 4, 0	0.7987	1.0	0.8452	no	no
P22178	MAOC_FLATR	1, ., 1, ., 1, ., 4, 0	0.8293	1.0	0.7669	N/A	no
A7MN74	MAO1_CROS8	1, ., 1, ., 1, ., 3, 8	0.4408	0.9798	0.8604	yes	no
B4TW15	MAO1_SALSV	1, ., 1, ., 1, ., 3, 8	0.4373	0.9698	0.8530	yes	no
B5F5W5	MAO1_SALA4	1, ., 1, ., 1, ., 3, 8	0.4373	0.9698	0.8530	yes	no
B5Z1T9	MAO1_ECO5E	1, ., 1, ., 1, ., 3, 8	0.4308	0.9778	0.8601	yes	no
A0KHR8	MAO1_AERHH	1, ., 1, ., 1, ., 3, 8	0.4563	0.9718	0.8563	yes	no
Q83ML6	MAO1_SHIFL	1, ., 1, ., 1, ., 3, 8	0.4308	0.9778	0.8601	yes	no
P37222	MAOC_SOLLC	1, ., 1, ., 1, ., 4, 0	0.8108	0.9959	0.8638	N/A	no
P37223	MAOX_MESCR	1, ., 1, ., 1, ., 4, 0	0.8148	1.0	0.8495	N/A	no
P51615	MAOX_VITVI	1, ., 1, ., 1, ., 4, 0	0.8309	1.0	0.8409	no	no
P40927	MAOX_COLLI	1, ., 1, ., 1, ., 4, 0	0.5271	0.9939	0.8868	N/A	no
Q6TU48	MAOX_DICDI	1, ., 1, ., 1, ., 4, 0	0.4696	0.9839	0.8988	yes	no
Q9CA83	MAOP4_ARATH	1, ., 1, ., 1, ., 4, 0	0.8309	1.0	0.7693	yes	no
B4T5V6	MAO1_SALNS	1, ., 1, ., 1, ., 3, 8	0.4353	0.9698	0.8530	yes	no
Q320R8	MAO1_SHIBS	1, ., 1, ., 1, ., 3, 8	0.4328	0.9778	0.8601	yes	no
Q0T457	MAO1_SHIF8	1, ., 1, ., 1, ., 3, 8	0.4308	0.9778	0.8601	yes	no
P48163	MAOX_HUMAN	1, ., 1, ., 1, ., 4, 0	0.5222	0.9879	0.8583	yes	no
P12628	MAOX_PHAVU	1, ., 1, ., 1, ., 4, 0	0.8249	1.0	0.8438	N/A	no
P16243	MAOC_MAIZE	1, ., 1, ., 1, ., 4, 0	0.7907	1.0	0.7814	N/A	no
B4TII8	MAO1_SALHS	1, ., 1, ., 1, ., 3, 8	0.4373	0.9698	0.8530	yes	no
Q6FFL8	MAO1_ACIAD	1, ., 1, ., 1, ., 3, 8	0.4484	0.9698	0.8515	yes	no
Q57P88	MAO1_SALCH	1, ., 1, ., 1, ., 3, 8	0.4373	0.9698	0.8530	yes	no
Q5PHY7	MAO1_SALPA	1, ., 1, ., 1, ., 3, 8	0.4373	0.9698	0.8530	yes	no
Q4FRX3	MAO1_PSYA2	1, ., 1, ., 1, ., 3, 8	0.4424	0.9859	0.875	yes	no
P36444	MAOC_FLAPR	1, ., 1, ., 1, ., 4, 0	0.8370	1.0	0.7681	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.40	0.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		497
PLN03129		581	PLN03129, PLN03129, NADP-dependent malic enzyme; P	0.0
PRK13529		563	PRK13529, PRK13529, malate dehydrogenase; Provisio	0.0
PTZ00317		559	PTZ00317, PTZ00317, NADP-dependent malic enzyme; P	0.0
cd05312		279	cd05312, NAD_bind_1_malic_enz, NAD(P) binding doma	1e-154
pfam03949		255	pfam03949, Malic_M, Malic enzyme, NAD binding doma	1e-125
COG0281		432	COG0281, SfcA, Malic enzyme [Energy production and	1e-121
pfam00390		182	pfam00390, malic, Malic enzyme, N-terminal domain	1e-101
smart00919		231	smart00919, Malic_M, Malic enzyme, NAD binding dom	5e-97
cd00762		254	cd00762, NAD_bind_malic_enz, NAD(P) binding domain	3e-89
cd05311		226	cd05311, NAD_bind_2_malic_enz, NAD(P) binding doma	6e-32
PRK12862		763	PRK12862, PRK12862, malic enzyme; Reviewed	3e-24
PRK07232		752	PRK07232, PRK07232, bifunctional malic enzyme oxid	4e-21
PRK12861		764	PRK12861, PRK12861, malic enzyme; Reviewed	2e-20
cd05191		86	cd05191, NAD_bind_amino_acid_DH, NAD(P) binding do	2e-07

>gnl\|CDD\|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional	Back alignment and domain information

 Score = 1004 bits (2597), Expect = 0.0
 Identities = 366/497 (73%), Positives = 425/497 (85%)

Query: 1   MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIY 60
            + N+R  + PL KY A+MDLQERN++LFY++LIDN+EELLPIVYTPTVGEACQKYGS++
Sbjct: 85  FMENLRALESPLAKYRALMDLQERNERLFYRVLIDNIEELLPIVYTPTVGEACQKYGSLF 144

Query: 61  SRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLY 120
            RP+G++ISLKDKG+VL +L+NWPE+++QVIVVTDGERILGLGDLG  GMGIPVGKL LY
Sbjct: 145 RRPRGLYISLKDKGRVLSMLKNWPERDVQVIVVTDGERILGLGDLGVQGMGIPVGKLDLY 204

Query: 121 TALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYG 180
           TA GGIRPSA LPV IDVGTNNEKLL+D FYIGLRQ R  G+EY EL+ EFM AVKQ +G
Sbjct: 205 TAAGGIRPSAVLPVCIDVGTNNEKLLNDPFYIGLRQPRLTGEEYDELVDEFMEAVKQRWG 264

Query: 181 ERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRF 240
            ++L+QFEDFAN NAF LL++Y TTHL FNDDIQGTA+V LAGL++A++  GG LADQR 
Sbjct: 265 PKVLVQFEDFANKNAFRLLQRYRTTHLCFNDDIQGTAAVALAGLLAALRATGGDLADQRI 324

Query: 241 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300
           LF GAGEAGTGIAELIAL +S+QT +  EE RK+IWLVDSKGL+  SR +SLQ FKKP+A
Sbjct: 325 LFAGAGEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFA 384

Query: 301 HEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSEC 360
           H+HEP   L++AV AIKPT+LIG SG G TFTKEV+EAMASLNE+PIIF+LSNPTS++EC
Sbjct: 385 HDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIFALSNPTSKAEC 444

Query: 361 TAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDD 420
           TAEEAYTW+ GRAIFASGSPFDP EY    F PGQANNAYIFPG+GLG ++SGAIRV DD
Sbjct: 445 TAEEAYTWTGGRAIFASGSPFDPVEYNGKTFHPGQANNAYIFPGIGLGALLSGAIRVTDD 504

Query: 421 MLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDL 480
           MLLAAAEALA QVT+E   KG +YPPF  IR ISAH+AA VAAKAYE GLATRLP P+DL
Sbjct: 505 MLLAAAEALAAQVTEEELAKGAIYPPFSRIRDISAHVAAAVAAKAYEEGLATRLPRPEDL 564

Query: 481 VKYAESCMYSPAYRTYR 497
           V+YAESCMYSP YR YR
Sbjct: 565 VEYAESCMYSPVYRPYR 581

Length = 581

>gnl\|CDD\|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional	Back alignment and domain information

>gnl\|CDD\|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|133454 cd05312, NAD_bind_1_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 1	Back alignment and domain information

>gnl\|CDD\|217809 pfam03949, Malic_M, Malic enzyme, NAD binding domain	Back alignment and domain information

>gnl\|CDD\|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|215894 pfam00390, malic, Malic enzyme, N-terminal domain	Back alignment and domain information

>gnl\|CDD\|214912 smart00919, Malic_M, Malic enzyme, NAD binding domain	Back alignment and domain information

>gnl\|CDD\|133442 cd00762, NAD_bind_malic_enz, NAD(P) binding domain of malic enzyme	Back alignment and domain information

>gnl\|CDD\|133453 cd05311, NAD_bind_2_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 2	Back alignment and domain information

>gnl\|CDD\|183799 PRK12862, PRK12862, malic enzyme; Reviewed	Back alignment and domain information

>gnl\|CDD\|235976 PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183798 PRK12861, PRK12861, malic enzyme; Reviewed	Back alignment and domain information

>gnl\|CDD\|133449 cd05191, NAD_bind_amino_acid_DH, NAD(P) binding domain of amino acid dehydrogenase-like proteins	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		497
KOG1257		582	consensus NADP+-dependent malic enzyme [Energy pro	100.0
PRK13529		563	malate dehydrogenase; Provisional	100.0
PLN03129		581	NADP-dependent malic enzyme; Provisional	100.0
PTZ00317		559	NADP-dependent malic enzyme; Provisional	100.0
COG0281		432	SfcA Malic enzyme [Energy production and conversio	100.0
PRK12861		764	malic enzyme; Reviewed	100.0
PRK12862		763	malic enzyme; Reviewed	100.0
PRK07232		752	bifunctional malic enzyme oxidoreductase/phosphotr	100.0
cd05312		279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	100.0
PF03949		255	Malic_M: Malic enzyme, NAD binding domain; InterPr	100.0
cd00762		254	NAD_bind_malic_enz NAD(P) binding domain of malic	100.0
PF00390		182	malic: Malic enzyme, N-terminal domain; InterPro:	100.0
cd05311		226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	100.0
cd05191		86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	98.91
PRK05476		425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.84
PLN02477		410	glutamate dehydrogenase	97.54
TIGR01035		417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.47
PRK14031		444	glutamate dehydrogenase; Provisional	97.36
cd05211		217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	97.31
cd00401		413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.27
PRK09414		445	glutamate dehydrogenase; Provisional	97.27
PTZ00079		454	NADP-specific glutamate dehydrogenase; Provisional	97.17
PRK00045		423	hemA glutamyl-tRNA reductase; Reviewed	97.15
cd05213		311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.15
TIGR00936		406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.14
TIGR02853		287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.14
PLN02494		477	adenosylhomocysteinase	97.02
PRK14982		340	acyl-ACP reductase; Provisional	97.0
cd01080		168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.99
PF01488		135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	96.82
PRK14030		445	glutamate dehydrogenase; Provisional	96.68
PRK08306		296	dipicolinate synthase subunit A; Reviewed	96.67
cd01076		227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	96.6
COG0373		414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.56
PLN00203		519	glutamyl-tRNA reductase	96.51
PRK14192		283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.51
cd05313		254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	96.46
cd01075		200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.38
PTZ00075		476	Adenosylhomocysteinase; Provisional	96.21
PRK14175		286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.17
PRK08293		287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.11
PLN00106		323	malate dehydrogenase	96.08
PRK13940		414	glutamyl-tRNA reductase; Provisional	96.06
PRK12549		284	shikimate 5-dehydrogenase; Reviewed	95.98
cd01078		194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.79
cd01065		155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.68
TIGR00518		370	alaDH alanine dehydrogenase. The family of known L	95.48
PF00670		162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.22
PRK00676		338	hemA glutamyl-tRNA reductase; Validated	95.15
PF00208		244	ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val	95.02
TIGR01809		282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.02
TIGR02356		202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.0
cd00650		263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	94.87
PRK10792		285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.87
PRK05086		312	malate dehydrogenase; Provisional	94.75
PRK14191		285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.69
PF03807		96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.67
PF00899		135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.56
TIGR00561		511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.55
PRK00066		315	ldh L-lactate dehydrogenase; Reviewed	94.49
cd05212		140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.36
cd05296		419	GH4_P_beta_glucosidase Glycoside Hydrolases Family	94.35
PTZ00082		321	L-lactate dehydrogenase; Provisional	94.14
cd05291		306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	94.13
PTZ00117		319	malate dehydrogenase; Provisional	93.99
PRK12475		338	thiamine/molybdopterin biosynthesis MoeB-like prot	93.96
cd05197		425	GH4_glycoside_hydrolases Glycoside Hydrases Family	93.96
PRK07531		495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	93.94
PRK09424		509	pntA NAD(P) transhydrogenase subunit alpha; Provis	93.92
PRK08762		376	molybdopterin biosynthesis protein MoeB; Validated	93.84
TIGR02355		240	moeB molybdopterin synthase sulfurylase MoeB. This	93.81
PRK05600		370	thiamine biosynthesis protein ThiF; Validated	93.81
PRK06035		291	3-hydroxyacyl-CoA dehydrogenase; Validated	93.77
PRK08328		231	hypothetical protein; Provisional	93.72
PF01210		157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.72
cd00757		228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	93.64
PRK12749		288	quinate/shikimate dehydrogenase; Reviewed	93.64
PRK08223		287	hypothetical protein; Validated	93.62
PRK08644		212	thiamine biosynthesis protein ThiF; Provisional	93.51
cd01079		197	NAD_bind_m-THF_DH NAD binding domain of methylene-	93.47
PRK06223		307	malate dehydrogenase; Reviewed	93.35
PF00056		141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	93.23
PRK14189		285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.21
PRK14027		283	quinate/shikimate dehydrogenase; Provisional	92.97
PRK14178		279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.88
cd05297		423	GH4_alpha_glucosidase_galactosidase Glycoside Hydr	92.78
PRK15076		431	alpha-galactosidase; Provisional	92.73
PRK14176		287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.72
PRK14194		301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.68
PTZ00325		321	malate dehydrogenase; Provisional	92.67
TIGR02992		326	ectoine_eutC ectoine utilization protein EutC. Mem	92.47
PRK11880		267	pyrroline-5-carboxylate reductase; Reviewed	92.39
PRK08605		332	D-lactate dehydrogenase; Validated	92.29
PRK00257		381	erythronate-4-phosphate dehydrogenase; Validated	92.28
cd01487		174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	92.27
PRK12548		289	shikimate 5-dehydrogenase; Provisional	92.26
cd00704		323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	92.18
TIGR01758		324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	92.18
PRK05690		245	molybdopterin biosynthesis protein MoeB; Provision	92.14
COG0334		411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	92.09
PRK07688		339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	92.07
PRK09260		288	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.07
PLN02928		347	oxidoreductase family protein	92.03
PRK00258		278	aroE shikimate 5-dehydrogenase; Reviewed	92.01
PRK14619		308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	91.72
PRK06129		308	3-hydroxyacyl-CoA dehydrogenase; Validated	91.67
PRK05597		355	molybdopterin biosynthesis protein MoeB; Validated	91.6
PRK06130		311	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.5
cd01336		325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	91.49
COG0169		283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	91.42
PF02826		178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	91.32
PRK15438		378	erythronate-4-phosphate dehydrogenase PdxB; Provis	91.25
PRK14851		679	hypothetical protein; Provisional	90.97
PRK14179		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.93
COG0111		324	SerA Phosphoglycerate dehydrogenase and related de	90.92
PRK07411		390	hypothetical protein; Validated	90.82
PRK14183		281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.77
PRK14190		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.65
PRK07878		392	molybdopterin biosynthesis-like protein MoeZ; Vali	90.43
PRK14184		286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.38
PF01262		168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	90.22
TIGR01763		305	MalateDH_bact malate dehydrogenase, NAD-dependent.	90.21
PF02056		183	Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP	90.16
cd01337		310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	90.04
PRK08291		330	ectoine utilization protein EutC; Validated	89.89
cd05298		437	GH4_GlvA_pagL_like Glycoside Hydrolases Family 4;	89.81
TIGR01915		219	npdG NADPH-dependent F420 reductase. This model re	89.69
PRK14177		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.58
TIGR02354		200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	89.56
PRK12550		272	shikimate 5-dehydrogenase; Reviewed	89.56
TIGR01772		312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	89.41
PF02882		160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	89.33
PRK14174		295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.29
cd01492		197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	88.8
PRK07634		245	pyrroline-5-carboxylate reductase; Reviewed	88.77
PRK12921		305	2-dehydropantoate 2-reductase; Provisional	88.74
TIGR00872		298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	88.74
COG0578		532	GlpA Glycerol-3-phosphate dehydrogenase [Energy pr	88.55
PRK14188		296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.37
PRK14172		278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.09
cd01338		322	MDH_choloroplast_like Chloroplast-like malate dehy	88.04
PLN02306		386	hydroxypyruvate reductase	87.93
PRK14193		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.85
TIGR01759		323	MalateDH-SF1 malate dehydrogenase. This model repr	87.65
PRK13243		333	glyoxylate reductase; Reviewed	87.53
PRK06522		304	2-dehydropantoate 2-reductase; Reviewed	87.43
PRK08374		336	homoserine dehydrogenase; Provisional	87.4
PLN02516		299	methylenetetrahydrofolate dehydrogenase (NADP+)	87.22
cd01485		198	E1-1_like Ubiquitin activating enzyme (E1), repeat	87.14
COG0686		371	Ald Alanine dehydrogenase [Amino acid transport an	86.97
PRK00094		325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	86.96
TIGR01408		1008	Ube1 ubiquitin-activating enzyme E1. This model re	86.91
PRK07679		279	pyrroline-5-carboxylate reductase; Reviewed	86.88
PRK14187		294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.87
PRK14168		297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.87
cd05290		307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	86.85
PRK07066		321	3-hydroxybutyryl-CoA dehydrogenase; Validated	86.79
PRK06141		314	ornithine cyclodeaminase; Validated	86.58
PRK14171		288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.53
PRK14618		328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	86.52
PRK14166		282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.07
cd01339		300	LDH-like_MDH L-lactate dehydrogenase-like malate d	86.05
PRK15116		268	sulfur acceptor protein CsdL; Provisional	86.01
PRK05442		326	malate dehydrogenase; Provisional	86.01
PRK14170		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.84
PRK09599		301	6-phosphogluconate dehydrogenase-like protein; Rev	85.64
KOG2337		669	consensus Ubiquitin activating E1 enzyme-like prot	85.54
cd05293		312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	85.53
PLN02602		350	lactate dehydrogenase	85.47
PRK15317		517	alkyl hydroperoxide reductase subunit F; Provision	85.43
TIGR01381		664	E1_like_apg7 E1-like protein-activating enzyme Gsa	85.4
PRK04346		397	tryptophan synthase subunit beta; Validated	85.09
TIGR00507		270	aroE shikimate 5-dehydrogenase. This model finds p	85.06
PRK07574		385	formate dehydrogenase; Provisional	84.95
cd01483		143	E1_enzyme_family Superfamily of activating enzymes	84.75
PRK09880		343	L-idonate 5-dehydrogenase; Provisional	84.45
PTZ00345		365	glycerol-3-phosphate dehydrogenase; Provisional	84.26
PRK01710		458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	84.23
PLN02545		295	3-hydroxybutyryl-CoA dehydrogenase	84.18
cd00755		231	YgdL_like Family of activating enzymes (E1) of ubi	84.16
PRK14185		293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	83.62
PRK09310		477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	83.62
PRK12480		330	D-lactate dehydrogenase; Provisional	83.48
PRK07340		304	ornithine cyclodeaminase; Validated	83.25
PRK14169		282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	83.05
PRK08410		311	2-hydroxyacid dehydrogenase; Provisional	82.84
PF07992		201	Pyr_redox_2: Pyridine nucleotide-disulphide oxidor	82.78
PRK14173		287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.52
PRK07530		292	3-hydroxybutyryl-CoA dehydrogenase; Validated	82.45
cd05292		308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	82.12
PLN02616		364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	82.05
PRK14181		287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.94
TIGR03140		515	AhpF alkyl hydroperoxide reductase, F subunit. Thi	81.89
PRK14180		282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.8
PLN02527		306	aspartate carbamoyltransferase	81.66
PRK15469		312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	81.65
PRK06487		317	glycerate dehydrogenase; Provisional	81.61
PRK06436		303	glycerate dehydrogenase; Provisional	81.59
PRK14167		297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.58
PRK06153		393	hypothetical protein; Provisional	81.56
PRK05808		282	3-hydroxybutyryl-CoA dehydrogenase; Validated	81.3
cd05294		309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	81.29
TIGR02279		503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	81.07
PRK06476		258	pyrroline-5-carboxylate reductase; Reviewed	80.94
PF00070		80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	80.94
PF02423		313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	80.9
TIGR03693		637	ocin_ThiF_like putative thiazole-containing bacter	80.89
PRK14182		282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	80.83
PLN03139		386	formate dehydrogenase; Provisional	80.59
PRK06407		301	ornithine cyclodeaminase; Provisional	80.55
KOG0029		501	consensus Amine oxidase [Secondary metabolites bio	80.49
PRK14620		326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	80.19
PRK07680		273	late competence protein ComER; Validated	80.02

>KOG1257 consensus NADP+-dependent malic enzyme [Energy production and conversion]	Back alignment and domain information

Probab=100.00  E-value=2.5e-198  Score=1539.93  Aligned_cols=495  Identities=65%  Similarity=1.094  Sum_probs=490.6

Q ss_pred             ChhhhcccCCchhHHHHHHHHHHhhHHHHHHHhhcCcccccccccccchhHHHHHHhhhhcCCCcceecccCchhHHHHH
Q 010939            1 MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVL   80 (497)
Q Consensus         1 ~~~~~~~~~~~l~k~~~L~~L~~~N~~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l   80 (497)
                      |+.+|+++++||+||+||++||+|||+||||+|++|+||+||||||||||+|||+||++||+|+|||||++|+|+|.++|
T Consensus        74 ~~~~l~~~~~~l~ky~~L~~L~~rNerLfY~~l~~nie~~~PIvYTPTvG~acq~y~~i~r~p~Glfisi~D~Ghi~~~l  153 (582)
T KOG1257|consen   74 CMNNLRSLTSPLAKYIYLMDLQDRNERLFYRLLIDNIEELLPIVYTPTVGLACQQYGLIFRRPQGLFISIKDKGHIKQVL  153 (582)
T ss_pred             HHHHHHhccchHHHHHHHHHHHHhhhHHHHHHHHhhHHHhCCeeecCcHHHHHHHhhhhhccCceeEEEecccchHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCCceEEEEecCceeeccCCCCCcccccchhhHHHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcc
Q 010939           81 RNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAI  160 (497)
Q Consensus        81 ~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~  160 (497)
                      +|||.++|++||||||+|||||||||++|||||+||++||||||||+|++|||||||||||||+||+||||+|+|++|++
T Consensus       154 ~nWp~~~V~~IvVTDGerILGLGDlG~~GmgIpvgKL~Lyta~~GI~P~~cLPV~LDVGTNNe~Ll~DplYiGLr~~R~~  233 (582)
T KOG1257|consen  154 KNWPERNVKAIVVTDGERILGLGDLGVNGMGIPVGKLALYTALGGIRPSRCLPVCLDVGTNNEKLLNDPLYIGLRQRRVR  233 (582)
T ss_pred             HhCCccceeEEEEeCCCceecccccccCcccceecHHHHHHHhcCCChhhceeEEEeccCChHHHhcCcccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHcCCCCceecCccchhHHHHHHHHHHHHHhCCCCCCceE
Q 010939          161 GQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRF  240 (497)
Q Consensus       161 g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d~ri  240 (497)
                      |++||+|+||||+||.++|||+++||||||+++|||++|+|||.++|||||||||||+|+|||||+|+|++|++|+|++|
T Consensus       234 g~eYd~~~dEFm~Av~~~yG~~~lIqFEDF~~~nAfrlL~kYr~~~c~FNDDIQGTaaValAgllaa~rit~~~lsd~~i  313 (582)
T KOG1257|consen  234 GKEYDEFLDEFMEAVVQRYGPNTLIQFEDFANHNAFRLLEKYRNKYCMFNDDIQGTAAVALAGLLAALRITGKPLSDHVI  313 (582)
T ss_pred             ccHHHHHHHHHHHHHHHHhCcceEEEehhccchhHHHHHHHhccccceecccccchhHHHHHHHHHHHHHhCCccccceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcE
Q 010939          241 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTI  320 (497)
Q Consensus       241 v~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptv  320 (497)
                      ||+|||+||+|||+||+.+|+++ |+|+|||+|+|||+|++|||+++|+.+++++|++||++++++.+|+|||+.|||||
T Consensus       314 lf~GAG~A~~GIA~l~v~~m~~~-Gl~~eeA~kkIwlvD~~GLi~~~r~~~l~~~~~~fAk~~~~~~~L~e~V~~vKPtv  392 (582)
T KOG1257|consen  314 LFLGAGEAALGIANLIVMAMVKE-GLSEEEARKKIWLVDSKGLITKGRKASLTEEKKPFAKDHEEIKDLEEAVKEVKPTV  392 (582)
T ss_pred             EEecCchHHhhHHHHHHHHHHHc-CCCHHHHhccEEEEecCceeeccccCCCChhhccccccChHHHHHHHHHHhcCCcE
Confidence            99999999999999999999995 99999999999999999999999976899999999999999999999999999999


Q ss_pred             EEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeeeCCCCccccc
Q 010939          321 LIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAY  400 (497)
Q Consensus       321 LIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~~~p~Q~NN~~  400 (497)
                      |||+|+++|+|||||||+|+++|||||||||||||+++||||||||+||+||||||||||||||+++||+|+||||||+|
T Consensus       393 LiG~S~~~g~Fteevl~~Ma~~~erPiIFalSNPT~~aECtae~ay~~t~Gr~ifaSGSPF~pV~~~gK~~~pgQ~NN~y  472 (582)
T KOG1257|consen  393 LIGASGVGGAFTEEVLRAMAKSNERPIIFALSNPTSKAECTAEQAYKWTKGRAIFASGSPFPPVEYNGKVYVPGQGNNAY  472 (582)
T ss_pred             EEecccCCccCCHHHHHHHHhcCCCceEEecCCCccccccCHHHHhhhcCCcEEEecCCCCCCceeCCcEecccCCceeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhhHHHHHcCCcccCHHHHHHHHHHHhccCCccCCCCCCccCCCCCcchhhHHHHHHHHHHHHHcCCCCCCCCchhH
Q 010939          401 IFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDL  480 (497)
Q Consensus       401 iFPGiglG~i~~~a~~itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~AVa~~A~~~GlA~~~~~p~d~  480 (497)
                      +|||||||+++|++++|||+||++||++||+.++++++.+|.||||+++||+||.+||++|.++|+++|+|+..|.|+|+
T Consensus       473 iFPGi~Lg~vlsg~~~i~D~mfl~Aae~LA~~v~~e~~~~g~lyPpl~~ir~iS~~Ia~aV~~~a~~~glA~~~p~P~d~  552 (582)
T KOG1257|consen  473 IFPGIGLGVVLSGARRIPDEMFLAAAEALAEQVSEEELEKGRLYPPLSNIREISANIAAAVLKYAYEEGLATRYPEPKDK  552 (582)
T ss_pred             ecchHHHHHHHcCCccCCHHHHHHHHHHHHhhCCHhHhhcCCcCCChhHHHHHHHHHHHHHHHHHHhcCccccCCCcccH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCcccCCCCC
Q 010939          481 VKYAESCMYSPAYRTY  496 (497)
Q Consensus       481 ~~~i~~~mw~P~Y~~~  496 (497)
                      .+|++++||.|+|+++
T Consensus       553 ~~~~~~~~y~~~Y~~~  568 (582)
T KOG1257|consen  553 EKFIEESMYNPEYRNS  568 (582)
T ss_pred             HHHHHhccCCcccccc
Confidence            9999999999999985

>PRK13529 malate dehydrogenase; Provisional	Back alignment and domain information

>PLN03129 NADP-dependent malic enzyme; Provisional	Back alignment and domain information

>PTZ00317 NADP-dependent malic enzyme; Provisional	Back alignment and domain information

>COG0281 SfcA Malic enzyme [Energy production and conversion]	Back alignment and domain information

>PRK12861 malic enzyme; Reviewed	Back alignment and domain information

>PRK12862 malic enzyme; Reviewed	Back alignment and domain information

>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	Back alignment and domain information

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1	Back alignment and domain information

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e	Back alignment and domain information

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme	Back alignment and domain information

>PF00390 malic: Malic enzyme, N-terminal domain; InterPro: IPR012301 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e	Back alignment and domain information

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2	Back alignment and domain information

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins	Back alignment and domain information

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional	Back alignment and domain information

>PLN02477 glutamate dehydrogenase	Back alignment and domain information

>TIGR01035 hemA glutamyl-tRNA reductase	Back alignment and domain information

>PRK14031 glutamate dehydrogenase; Provisional	Back alignment and domain information

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase	Back alignment and domain information

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)	Back alignment and domain information

>PRK09414 glutamate dehydrogenase; Provisional	Back alignment and domain information

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional	Back alignment and domain information

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed	Back alignment and domain information

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase	Back alignment and domain information

>TIGR00936 ahcY adenosylhomocysteinase	Back alignment and domain information

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit	Back alignment and domain information

>PLN02494 adenosylhomocysteinase	Back alignment and domain information

>PRK14982 acyl-ACP reductase; Provisional	Back alignment and domain information

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase	Back alignment and domain information

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases	Back alignment and domain information

>PRK14030 glutamate dehydrogenase; Provisional	Back alignment and domain information

>PRK08306 dipicolinate synthase subunit A; Reviewed	Back alignment and domain information

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1	Back alignment and domain information

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	Back alignment and domain information

>PLN00203 glutamyl-tRNA reductase	Back alignment and domain information

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2	Back alignment and domain information

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase	Back alignment and domain information

>PTZ00075 Adenosylhomocysteinase; Provisional	Back alignment and domain information

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>PLN00106 malate dehydrogenase	Back alignment and domain information

>PRK13940 glutamyl-tRNA reductase; Provisional	Back alignment and domain information

>PRK12549 shikimate 5-dehydrogenase; Reviewed	Back alignment and domain information

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase	Back alignment and domain information

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase	Back alignment and domain information

>TIGR00518 alaDH alanine dehydrogenase	Back alignment and domain information

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3	Back alignment and domain information

>PRK00676 hemA glutamyl-tRNA reductase; Validated	Back alignment and domain information

>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related	Back alignment and domain information

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type	Back alignment and domain information

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E	Back alignment and domain information

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family	Back alignment and domain information

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK05086 malate dehydrogenase; Provisional	Back alignment and domain information

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain	Back alignment and domain information

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP	Back alignment and domain information

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit	Back alignment and domain information

>PRK00066 ldh L-lactate dehydrogenase; Reviewed	Back alignment and domain information

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase	Back alignment and domain information

>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	Back alignment and domain information

>PTZ00082 L-lactate dehydrogenase; Provisional	Back alignment and domain information

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	Back alignment and domain information

>PTZ00117 malate dehydrogenase; Provisional	Back alignment and domain information

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional	Back alignment and domain information

>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4	Back alignment and domain information

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated	Back alignment and domain information

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional	Back alignment and domain information

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated	Back alignment and domain information

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB	Back alignment and domain information

>PRK05600 thiamine biosynthesis protein ThiF; Validated	Back alignment and domain information

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated	Back alignment and domain information

>PRK08328 hypothetical protein; Provisional	Back alignment and domain information

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate	Back alignment and domain information

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA	Back alignment and domain information

>PRK12749 quinate/shikimate dehydrogenase; Reviewed	Back alignment and domain information

>PRK08223 hypothetical protein; Validated	Back alignment and domain information

>PRK08644 thiamine biosynthesis protein ThiF; Provisional	Back alignment and domain information

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase	Back alignment and domain information

>PRK06223 malate dehydrogenase; Reviewed	Back alignment and domain information

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []	Back alignment and domain information

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14027 quinate/shikimate dehydrogenase; Provisional	Back alignment and domain information

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases	Back alignment and domain information

>PRK15076 alpha-galactosidase; Provisional	Back alignment and domain information

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PTZ00325 malate dehydrogenase; Provisional	Back alignment and domain information

>TIGR02992 ectoine_eutC ectoine utilization protein EutC	Back alignment and domain information

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed	Back alignment and domain information

>PRK08605 D-lactate dehydrogenase; Validated	Back alignment and domain information

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated	Back alignment and domain information

>cd01487 E1_ThiF_like E1_ThiF_like	Back alignment and domain information

>PRK12548 shikimate 5-dehydrogenase; Provisional	Back alignment and domain information

>cd00704 MDH Malate dehydrogenase	Back alignment and domain information

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent	Back alignment and domain information

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional	Back alignment and domain information

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	Back alignment and domain information

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	Back alignment and domain information

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>PLN02928 oxidoreductase family protein	Back alignment and domain information

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed	Back alignment and domain information

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated	Back alignment and domain information

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated	Back alignment and domain information

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases	Back alignment and domain information

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]	Back alignment and domain information

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related	Back alignment and domain information

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional	Back alignment and domain information

>PRK14851 hypothetical protein; Provisional	Back alignment and domain information

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]	Back alignment and domain information

>PRK07411 hypothetical protein; Validated	Back alignment and domain information

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated	Back alignment and domain information

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1	Back alignment and domain information

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent	Back alignment and domain information

>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases	Back alignment and domain information

>PRK08291 ectoine utilization protein EutC; Validated	Back alignment and domain information

>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases	Back alignment and domain information

>TIGR01915 npdG NADPH-dependent F420 reductase	Back alignment and domain information

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2	Back alignment and domain information

>PRK12550 shikimate 5-dehydrogenase; Reviewed	Back alignment and domain information

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent	Back alignment and domain information

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)	Back alignment and domain information

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1	Back alignment and domain information

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed	Back alignment and domain information

>PRK12921 2-dehydropantoate 2-reductase; Provisional	Back alignment and domain information

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)	Back alignment and domain information

>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	Back alignment and domain information

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases	Back alignment and domain information

>PLN02306 hydroxypyruvate reductase	Back alignment and domain information

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR01759 MalateDH-SF1 malate dehydrogenase	Back alignment and domain information

>PRK13243 glyoxylate reductase; Reviewed	Back alignment and domain information

>PRK06522 2-dehydropantoate 2-reductase; Reviewed	Back alignment and domain information

>PRK08374 homoserine dehydrogenase; Provisional	Back alignment and domain information

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)	Back alignment and domain information

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like	Back alignment and domain information

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]	Back alignment and domain information

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated	Back alignment and domain information

>TIGR01408 Ube1 ubiquitin-activating enzyme E1	Back alignment and domain information

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed	Back alignment and domain information

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases	Back alignment and domain information

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>PRK06141 ornithine cyclodeaminase; Validated	Back alignment and domain information

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins	Back alignment and domain information

>PRK15116 sulfur acceptor protein CsdL; Provisional	Back alignment and domain information

>PRK05442 malate dehydrogenase; Provisional	Back alignment and domain information

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed	Back alignment and domain information

>KOG2337 consensus Ubiquitin activating E1 enzyme-like protein [Coenzyme transport and metabolism]	Back alignment and domain information

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases	Back alignment and domain information

>PLN02602 lactate dehydrogenase	Back alignment and domain information

>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional	Back alignment and domain information

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p	Back alignment and domain information

>PRK04346 tryptophan synthase subunit beta; Validated	Back alignment and domain information

>TIGR00507 aroE shikimate 5-dehydrogenase	Back alignment and domain information

>PRK07574 formate dehydrogenase; Provisional	Back alignment and domain information

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins	Back alignment and domain information

>PRK09880 L-idonate 5-dehydrogenase; Provisional	Back alignment and domain information

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional	Back alignment and domain information

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase	Back alignment and domain information

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E	Back alignment and domain information

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed	Back alignment and domain information

>PRK12480 D-lactate dehydrogenase; Provisional	Back alignment and domain information

>PRK07340 ornithine cyclodeaminase; Validated	Back alignment and domain information

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK08410 2-hydroxyacid dehydrogenase; Provisional	Back alignment and domain information

>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Back alignment and domain information

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases	Back alignment and domain information

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative	Back alignment and domain information

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit	Back alignment and domain information

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PLN02527 aspartate carbamoyltransferase	Back alignment and domain information

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional	Back alignment and domain information

>PRK06487 glycerate dehydrogenase; Provisional	Back alignment and domain information

>PRK06436 glycerate dehydrogenase; Provisional	Back alignment and domain information

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK06153 hypothetical protein; Provisional	Back alignment and domain information

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity	Back alignment and domain information

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC	Back alignment and domain information

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed	Back alignment and domain information

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Back alignment and domain information

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []	Back alignment and domain information

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein	Back alignment and domain information

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PLN03139 formate dehydrogenase; Provisional	Back alignment and domain information

>PRK06407 ornithine cyclodeaminase; Provisional	Back alignment and domain information

>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK07680 late competence protein ComER; Validated	Back alignment and domain information

Homologous Structure Templates