Citrus Sinensis ID: 010981

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490------
MWNPRGLILAVLALLVQVSVVYSVVLPLERAFPLSQPVQLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSITSGKDQFMNAGQLNMSSSSIEMLFKVLPLSILALFLHSLSFMEFQFL
cccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEccccccccEEcccccEEEEEEEEEcccccEEEEEEEccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEEEcccccccccccccEEEEcccccccccccccccccEEEEEcccccHHHHHHHcccccccccEEEcccccccccEEEEcccccccEEEEccccccccEEEEEEEEEEccEEEccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccccccccEEEccccccccccEEEEEccccEEEEccccEEEEEEEEcccEEEEEEEEEcccccEEEEcEEEEEEEEEEEccccEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccc
cccHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccHccHEEEEEEEEccccEEEEEEEEcccccEEEcccccccccccccHHHHcccccccccccEEEEEccccHHHHHcccccccccccccccEEEEEEcccccccEEEEEEEEEEccEEEccccccccccEEEEEEEcccccEEEEccccccEEcccccccHHHHHHHHccccccEEEEEEccccccccEEEEEcEEcccEEEEcccccccEEEEEEEEEEEccEEEEcccccEEcccccEEEEEccccEEcccHHHHHHHHHHHcccccccccEEEcccccEEEEEccccccccEEEEEEEccEEEcccHHHEEEEEcccccccEEccccccccccEEEEEcEEEccEEEEEEccccEEEEEEcccccEEEEEEccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
MWNPRGLILAVLALLVQVSVVYSVVLplerafplsqpvqlsqlrarDRVRHSRILQGVvggvvefpvqgssdpfligdsYWLYFTKvklgsppkefnvqidtgsdilwvtcsscsncpqnsglgiqlnffdtsssstarivscsdplcaseiqttatqcpsgsnqcsysfeygdgsgtsgsyiyDTLYFDAILGESLIANSTALIVFGcstyqtgdlsktdkaidgifgfgqGDLSVISQLasrgitprvfshclkgqgngggILVLGeilepsivysplvpskphynlnlhgitvngqllsidpsafaasnnretivDSGTTLTYLVEEAFDPFVSAITATvsqsvtptmskgkqcylvsnsvseifpqvslnfeggasmvlkpeeyLIHLGFYDGAAMWCigfekspggvsilgdlvlkdkiFVYDLARQRVgwanydcslsvnvsitsgkdqfmnagqlnmsssSIEMLFKVLPLSILALFLHSLSFMEFQFL
MWNPRGLILAVLALLVQVSVVYSVVLPLerafplsqpvqlsqlraRDRVRHSRIlqgvvggvvefpvqGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTtatqcpsgsnQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSITSGKDQFMNAGQLNMSSSSIEMLFKVLPLSILALFLHSLSFMEFQFL
MWNPRGlilavlallvqvsvvysvvlplERAFPLSQPVQLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHClkgqgngggilvlgeilEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSITSGKDQFMNAGQLNMSSSSIEMLFKVLPLSILALFLHSLSFMEFQFL
****RGLILAVLALLVQVSVVYSVVLPLERAFPLSQPVQLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQC****NQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSITSGKDQFMNAGQLNM*SSSIEMLFKVLPLSILALFLHSLSFMEFQ**
***PRGLILAVLALLVQVSVVYS***************************************************LIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSG*GI*LNFFDT**SST*RIVSCSDPLCASEI********SGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESL*ANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKG************ILEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYD**********************************VLPLSILALFLHSLSFMEFQFL
MWNPRGLILAVLALLVQVSVVYSVVLPLERAFPLSQPVQLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQT*********NQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSITSGKDQFMNAGQLNMSSSSIEMLFKVLPLSILALFLHSLSFMEFQFL
MWNPRGLILAVLALLVQVSVVYSVVLPLERAFPLSQPVQLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSITSGKDQFMNAGQLNMSSSSIEMLFKVLPLSILALFLHSLSFMEFQFL
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MWNPRGLILAVLALLVQVSVVYSVVLPLERAFPLSQPVQLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSITSGKDQFMNAGQLNMSSSSIEMLFKVLPLSILALFLHSLSFMEFQFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query496 2.2.26 [Sep-21-2011]
Q9S9K4475 Aspartic proteinase-like no no 0.844 0.882 0.381 7e-78
Q766C3437 Aspartic proteinase nepen N/A no 0.739 0.839 0.307 8e-31
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.667 0.807 0.281 2e-28
Q0IU52410 Aspartic proteinase Asp1 no no 0.663 0.802 0.275 3e-27
Q3EBM5447 Probable aspartic proteas no no 0.804 0.892 0.297 8e-27
Q766C2438 Aspartic proteinase nepen N/A no 0.721 0.817 0.291 9e-27
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.665 0.66 0.290 3e-26
Q9LX20528 Aspartic proteinase-like no no 0.786 0.738 0.262 1e-25
Q9LZL3453 Aspartic proteinase PCS1 no no 0.667 0.730 0.269 9e-23
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.669 0.706 0.288 3e-20
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function desciption
 Score =  291 bits (745), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 175/459 (38%), Positives = 254/459 (55%), Gaps = 40/459 (8%)

Query: 39  QLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNV 98
            L   ++ D  RHSR+L  +     + P+ G S      DS  LYFTK+KLGSPPKE++V
Sbjct: 39  NLEHFKSHDTRRHSRMLASI-----DLPLGGDSRV----DSVGLYFTKIKLGSPPKEYHV 89

Query: 99  QIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQ 158
           Q+DTGSDILW+ C  C  CP  + L  +L+ FD ++SST++ V C D  C+   Q+ + Q
Sbjct: 90  QVDTGSDILWINCKPCPKCPTKTNLNFRLSLFDMNASSTSKKVGCDDDFCSFISQSDSCQ 149

Query: 159 CPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLS 218
              G   CSY   Y D S + G +I D L  + + G+         +VFGC + Q+G L 
Sbjct: 150 PALG---CSYHIVYADESTSDGKFIRDMLTLEQVTGDLKTGPLGQEVVFGCGSDQSGQLG 206

Query: 219 KTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILEPSIVYS 278
             D A+DG+ GFGQ + SV+SQLA+ G   RVFSHCL     GGGI  +G +  P +  +
Sbjct: 207 NGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCLDNV-KGGGIFAVGVVDSPKVKTT 265

Query: 279 PLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSA 338
           P+VP++ HYN+ L G+ V+G  L +  S      N  TIVDSGTTL Y  +  +D  +  
Sbjct: 266 PMVPNQMHYNVMLMGMDVDGTSLDLPRSIV---RNGGTIVDSGTTLAYFPKVLYDSLIET 322

Query: 339 ITATVSQSVT-PTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDG 397
           I A   Q V    + +  QC+  S +V E FP VS  FE    + + P +YL  L     
Sbjct: 323 ILA--RQPVKLHIVEETFQCFSFSTNVDEAFPPVSFEFEDSVKLTVYPHDYLFTL----E 376

Query: 398 AAMWCIGFEKSPGGVS--------ILGDLVLKDKIFVYDLARQRVGWANYDCSLSVNVSI 449
             ++C G++   GG++        +LGDLVL +K+ VYDL  + +GWA+++CS S+ +  
Sbjct: 377 EELYCFGWQ--AGGLTTDERSEVILLGDLVLSNKLVVYDLDNEVIGWADHNCSSSIKIKD 434

Query: 450 TSGKDQFMNAGQLNMSSS-SIEMLFKVL----PLSILAL 483
            SG     + G  N+SS+  + M+ K+L    PL ++A 
Sbjct: 435 GSGG--VYSVGADNLSSAPRLLMITKLLTILSPLIVMAF 471

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query496
255556768494 Aspartic proteinase Asp1 precursor, puta 0.945 0.949 0.749 0.0
224068901477 predicted protein [Populus trichocarpa] 0.951 0.989 0.740 0.0
449440161492 PREDICTED: aspartic proteinase-like prot 0.971 0.979 0.702 0.0
359482287502 PREDICTED: aspartic proteinase-like prot 0.981 0.970 0.721 0.0
356570798500 PREDICTED: aspartic proteinase-like prot 0.941 0.934 0.692 0.0
224140237478 predicted protein [Populus trichocarpa] 0.955 0.991 0.721 0.0
356505293499 PREDICTED: aspartic proteinase-like prot 0.941 0.935 0.685 0.0
297827153507 aspartyl protease family protein [Arabid 0.917 0.897 0.703 0.0
42569679512 aspartyl protease-like protein [Arabidop 0.925 0.896 0.696 0.0
42571079507 aspartyl protease-like protein [Arabidop 0.917 0.897 0.697 0.0
>gi|255556768|ref|XP_002519417.1| Aspartic proteinase Asp1 precursor, putative [Ricinus communis] gi|223541280|gb|EEF42831.1| Aspartic proteinase Asp1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/475 (74%), Positives = 417/475 (87%), Gaps = 6/475 (1%)

Query: 23  SVVLPLERAFPLSQPVQLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWL 82
           +  L LERA PL+Q  +L+QLRARD +RH+R+LQG VGGVV+F VQGSSDP+L+G    L
Sbjct: 25  ATFLSLERALPLNQSFELAQLRARDHLRHARLLQGFVGGVVDFSVQGSSDPYLVG----L 80

Query: 83  YFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVS 142
           YFT+VKLG+PP+EFNVQIDTGSD+LWVTCSSCSNCPQ SGLGIQLN+FDT+SSSTAR+V 
Sbjct: 81  YFTRVKLGTPPREFNVQIDTGSDVLWVTCSSCSNCPQTSGLGIQLNYFDTTSSSTARLVP 140

Query: 143 CSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANST 202
           CS P+C S+IQTTATQCP  SNQCSY+F+YGDGSGTSG Y+ DT YFDA+LGESLIANS+
Sbjct: 141 CSHPICTSQIQTTATQCPPQSNQCSYAFQYGDGSGTSGYYVSDTFYFDAVLGESLIANSS 200

Query: 203 ALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGG 262
           A IVFGCSTYQ+GDL+KTDKA+DGIFGFGQG+LSVISQL+S GITPRVFSHCLKG+ +GG
Sbjct: 201 AAIVFGCSTYQSGDLTKTDKAVDGIFGFGQGELSVISQLSSHGITPRVFSHCLKGEDSGG 260

Query: 263 GILVLGEILEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGT 322
           GILVLGEILEP IVYSPLVPS+PHYNL+L  I V+GQLL IDP+AFA S+NR TI+D+GT
Sbjct: 261 GILVLGEILEPGIVYSPLVPSQPHYNLDLQSIAVSGQLLPIDPAAFATSSNRGTIIDTGT 320

Query: 323 TLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMV 382
           TL YLVEEA+DPFVSAITA VSQ  TPT++KG QCYLVSNSVSE+FP VS NF GGA+M+
Sbjct: 321 TLAYLVEEAYDPFVSAITAAVSQLATPTINKGNQCYLVSNSVSEVFPPVSFNFAGGATML 380

Query: 383 LKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCS 442
           LKPEEYL++L  Y GAA+WCIGF+K  GG++ILGDLVLKDKIFVYDLA QR+GWANYDCS
Sbjct: 381 LKPEEYLMYLTNYAGAALWCIGFQKIQGGITILGDLVLKDKIFVYDLAHQRIGWANYDCS 440

Query: 443 LSVNVSITSGKDQFMNAGQLNMSSSSIEMLFKVLPLSILALFLHS-LSFMEFQFL 496
            SVNVS+TS KD F+NAGQL++SSSS + L K+LPLS +AL +H  L+ + FQFL
Sbjct: 441 SSVNVSVTSSKD-FINAGQLSVSSSSKDNLLKLLPLSSVALLMHILLALVNFQFL 494

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224068901|ref|XP_002326227.1| predicted protein [Populus trichocarpa] gi|222833420|gb|EEE71897.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449440161|ref|XP_004137853.1| PREDICTED: aspartic proteinase-like protein 2-like [Cucumis sativus] gi|449521209|ref|XP_004167622.1| PREDICTED: aspartic proteinase-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359482287|ref|XP_002263129.2| PREDICTED: aspartic proteinase-like protein 2 isoform 2 [Vitis vinifera] gi|297740017|emb|CBI30199.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356570798|ref|XP_003553571.1| PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|224140237|ref|XP_002323490.1| predicted protein [Populus trichocarpa] gi|222868120|gb|EEF05251.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356505293|ref|XP_003521426.1| PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|297827153|ref|XP_002881459.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297327298|gb|EFH57718.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42569679|ref|NP_181205.2| aspartyl protease-like protein [Arabidopsis thaliana] gi|330254186|gb|AEC09280.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42571079|ref|NP_973613.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|110737616|dbj|BAF00749.1| putative protease [Arabidopsis thaliana] gi|330254187|gb|AEC09281.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query496
TAIR|locus:2040545512 AT2G36670 [Arabidopsis thalian 0.915 0.886 0.669 6.2e-165
TAIR|locus:2172661493 AT5G22850 [Arabidopsis thalian 0.885 0.890 0.581 5.5e-141
TAIR|locus:2200023492 AT1G08210 [Arabidopsis thalian 0.905 0.912 0.534 1.1e-124
TAIR|locus:2183617482 AT5G36260 [Arabidopsis thalian 0.872 0.898 0.378 7.9e-78
TAIR|locus:2075512488 AT3G02740 [Arabidopsis thalian 0.856 0.870 0.365 4e-74
TAIR|locus:2198753485 AT1G05840 [Arabidopsis thalian 0.870 0.890 0.342 5.3e-72
TAIR|locus:2200365475 AT1G65240 [Arabidopsis thalian 0.844 0.882 0.364 2.1e-70
TAIR|locus:2101586430 AT3G42550 [Arabidopsis thalian 0.379 0.437 0.418 6.1e-66
TAIR|locus:2083098 632 AT3G50050 [Arabidopsis thalian 0.550 0.431 0.338 3.5e-45
TAIR|locus:2167776 631 AT5G43100 [Arabidopsis thalian 0.550 0.432 0.296 1.8e-37
TAIR|locus:2040545 AT2G36670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1605 (570.0 bits), Expect = 6.2e-165, P = 6.2e-165
 Identities = 312/466 (66%), Positives = 373/466 (80%)

Query:    29 ERAFPLSQPVQLSQLRARDRVRHSRIL-----QGVVGGVVEFPVQGSSDPFLIGDSY-WL 82
             +RAFPL + V+LS+LRARDRVRH+RIL     Q  VGGVV+FPVQGSSDP+L+G     L
Sbjct:    45 QRAFPLDELVELSELRARDRVRHARILLGGGRQSSVGGVVDFPVQGSSDPYLVGSKMTML 104

Query:    83 YFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVS 142
             YFTKVKLGSPP EFNVQIDTGSDILWVTCSSCSNCP +SGLGI L+FFD   S TA  V+
Sbjct:   105 YFTKVKLGSPPTEFNVQIDTGSDILWVTCSSCSNCPHSSGLGIDLHFFDAPGSLTAGSVT 164

Query:   143 CSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANST 202
             CSDP+C+S  QTTA QC S +NQC YSF YGDGSGTSG Y+ DT YFDAILGESL+ANS+
Sbjct:   165 CSDPICSSVFQTTAAQC-SENNQCGYSFRYGDGSGTSGYYMTDTFYFDAILGESLVANSS 223

Query:   203 ALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCXXXXXXXX 262
             A IVFGCSTYQ+GDL+K+DKA+DGIFGFG+G LSV+SQL+SRGITP VFSHC        
Sbjct:   224 APIVFGCSTYQSGDLTKSDKAVDGIFGFGKGKLSVVSQLSSRGITPPVFSHCLKGDGSGG 283

Query:   263 XXXXXXXXXEPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGT 322
                       P +VYSPLVPS+PHYNLNL  I VNGQ+L +D + F ASN R TIVD+GT
Sbjct:   284 GVFVLGEILVPGMVYSPLVPSQPHYNLNLLSIGVNGQMLPLDAAVFEASNTRGTIVDTGT 343

Query:   323 TLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMV 382
             TLTYLV+EA+D F++AI+ +VSQ VTP +S G+QCYLVS S+S++FP VSLNF GGASM+
Sbjct:   344 TLTYLVKEAYDLFLNAISNSVSQLVTPIISNGEQCYLVSTSISDMFPSVSLNFAGGASMM 403

Query:   383 LKPEEYLIHLGFYDGAAMWCIGFEKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCS 442
             L+P++YL H G YDGA+MWCIGF+K+P   +ILGDLVLKDK+FVYDLARQR+GWA+YDCS
Sbjct:   404 LRPQDYLFHYGIYDGASMWCIGFQKAPEEQTILGDLVLKDKVFVYDLARQRIGWASYDCS 463

Query:   443 LSVNVSITSGKDQFMNAGQ--LNMSSSSI--EMLFKVLPLSILALF 484
             +SVNVSITSGKD  +N+GQ  LN+S+  I   + F +L   +L +F
Sbjct:   464 MSVNVSITSGKD-IVNSGQPCLNISTRDILIRLFFSILFGLLLCIF 508
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
GO:0016558 "protein import into peroxisome matrix" evidence=RCA
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200365 AT1G65240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101586 AT3G42550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083098 AT3G50050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167776 AT5G43100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00000556001
SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (502 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query496
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-62
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-48
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 5e-43
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 3e-39
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 5e-39
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 2e-32
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 1e-28
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 2e-20
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 5e-17
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-15
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 4e-14
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 9e-13
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 2e-12
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 2e-10
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 3e-10
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 1e-09
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 2e-09
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 4e-08
cd05487326 cd05487, renin_like, Renin stimulates production o 7e-07
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 7e-07
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 1e-05
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 3e-05
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  204 bits (522), Expect = 1e-62
 Identities = 112/370 (30%), Positives = 157/370 (42%), Gaps = 117/370 (31%)

Query: 83  YFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVS 142
           Y   + +G+PP+ F++ +DTGSD+ W                                  
Sbjct: 2   YLVTLSIGTPPQPFSLIVDTGSDLTW---------------------------------- 27

Query: 143 CSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANST 202
                         TQC      CSY + YGDGS TSG    +T  F           S 
Sbjct: 28  --------------TQC------CSYEYSYGDGSSTSGVLATETFTFGDSS------VSV 61

Query: 203 ALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKG--QGN 260
             + FGC T   G         DGI G G+G LS++SQL S G     FS+CL       
Sbjct: 62  PNVAFGCGTDNEGGSFGGA---DGILGLGRGPLSLVSQLGSTG---NKFSYCLVPHDDTG 115

Query: 261 GGGILVLG---EILEPSIVYSPLVPS---KPHYNLNLHGITVNGQLLSIDPSAFA--ASN 312
           G   L+LG   ++    +VY+PLV +     +Y +NL GI+V G+ L I PS FA  +  
Sbjct: 116 GSSPLILGDAADLGGSGVVYTPLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDG 175

Query: 313 NRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVS 372
           +  TI+DSGTTLTYL + A                                    +P ++
Sbjct: 176 SGGTIIDSGTTLTYLPDPA------------------------------------YPDLT 199

Query: 373 LNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGFEKSP-GGVSILGDLVLKDKIFVYDLAR 431
           L+F+GGA + L PE Y +      G  + C+    S  GGVSILG++  ++ +  YDL  
Sbjct: 200 LHFDGGADLELPPENYFVD----VGEGVVCLAILSSSSGGVSILGNIQQQNFLVEYDLEN 255

Query: 432 QRVGWANYDC 441
            R+G+A  DC
Sbjct: 256 SRLGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 496
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.91
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.87
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.92
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.87
PF1365090 Asp_protease_2: Aspartyl protease 95.38
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.02
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 92.05
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 91.97
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 89.23
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 86.29
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 83.43
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.8e-60  Score=483.94  Aligned_cols=388  Identities=28%  Similarity=0.467  Sum_probs=298.3

Q ss_pred             eeeeeeeeCCC-----CCc----ccHHHHHHhhHHHHHHHhhcccCCeeeeeccCCCCCcccCCcceeEEEEEEeCCCCc
Q 010981           24 VVLPLERAFPL-----SQP----VQLSQLRARDRVRHSRILQGVVGGVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPK   94 (496)
Q Consensus        24 ~~~pl~~~~p~-----~~~----~~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Y~~~i~vGtP~q   94 (496)
                      .+++|.|+...     +..    ..+.+..+|+++|++++.++..   ...++.....     ..++.|+++|.||||||
T Consensus        25 ~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~~~~~~~-----~~~~~Y~v~i~iGTPpq   96 (431)
T PLN03146         25 FTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDA---SPNDPQSDLI-----SNGGEYLMNISIGTPPV   96 (431)
T ss_pred             eEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccc---cCCccccCcc-----cCCccEEEEEEcCCCCc
Confidence            88999876321     111    2244556677777766643211   1112221111     12349999999999999


Q ss_pred             EEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCCCCCCCCCCCeeeeEeCC
Q 010981           95 EFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCPSGSNQCSYSFEYGD  174 (496)
Q Consensus        95 ~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Y~~  174 (496)
                      ++.|++||||+++||+|.+|..|..+.     .+.|||++|+|++.++|+++.|.....  ...|.. ++.|.|.+.|+|
T Consensus        97 ~~~vi~DTGS~l~Wv~C~~C~~C~~~~-----~~~fdps~SST~~~~~C~s~~C~~~~~--~~~c~~-~~~c~y~i~Ygd  168 (431)
T PLN03146         97 PILAIADTGSDLIWTQCKPCDDCYKQV-----SPLFDPKKSSTYKDVSCDSSQCQALGN--QASCSD-ENTCTYSYSYGD  168 (431)
T ss_pred             eEEEEECCCCCcceEcCCCCcccccCC-----CCcccCCCCCCCcccCCCCcccccCCC--CCCCCC-CCCCeeEEEeCC
Confidence            999999999999999999999998652     478999999999999999999975322  234654 356999999999


Q ss_pred             CCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCCchHHHHHhcCCCCceeEEe
Q 010981          175 GSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHC  254 (496)
Q Consensus       175 g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~l~~~g~i~~~FS~~  254 (496)
                      |+.+.|.+++|+|+|++..++.   ....++.|||+....+.|.   ...+||||||++..|+++||..+  ++++||+|
T Consensus       169 gs~~~G~l~~Dtltlg~~~~~~---~~v~~~~FGc~~~~~g~f~---~~~~GilGLG~~~~Sl~sql~~~--~~~~FSyc  240 (431)
T PLN03146        169 GSFTKGNLAVETLTIGSTSGRP---VSFPGIVFGCGHNNGGTFD---EKGSGIVGLGGGPLSLISQLGSS--IGGKFSYC  240 (431)
T ss_pred             CCceeeEEEEEEEEeccCCCCc---ceeCCEEEeCCCCCCCCcc---CCCceeEecCCCCccHHHHhhHh--hCCcEEEE
Confidence            9988999999999998643222   1366899999998877642   35799999999999999999763  55799999


Q ss_pred             ecCCC---CccceEEeCCCCC---CCeEEeeCCCC--CCceeEEEeEEEEccEEeecCcccccccCCCcEEEeccccccc
Q 010981          255 LKGQG---NGGGILVLGEILE---PSIVYSPLVPS--KPHYNLNLHGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTY  326 (496)
Q Consensus       255 l~~~~---~~~G~l~~Gg~d~---~~l~~~pl~~~--~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGtt~~~  326 (496)
                      |.+..   ...|.|+||+..+   +.+.|+|++..  ..+|.|+|++|+||++.++++...+.......+||||||++++
T Consensus       241 L~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDSGTt~t~  320 (431)
T PLN03146        241 LVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTL  320 (431)
T ss_pred             CCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeCCcccee
Confidence            97522   3479999999642   35899999843  3689999999999999998877655423345799999999999


Q ss_pred             ccHHHHHHHHHHHHHHhccCcCCC-CCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCCceEEEeeeeCCceEEEEEE
Q 010981          327 LVEEAFDPFVSAITATVSQSVTPT-MSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGF  405 (496)
Q Consensus       327 lp~~~~~~i~~~i~~~~~~~~~~~-~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~~y~~~~~~~~~~~~~cl~i  405 (496)
                      ||+++|+++.++|..++....... ....+.||....  ...+|+|+|+| +|+++.|+|++|+++..    .+..|+++
T Consensus       321 Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~--~~~~P~i~~~F-~Ga~~~l~~~~~~~~~~----~~~~Cl~~  393 (431)
T PLN03146        321 LPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTS--DIKLPIITAHF-TGADVKLQPLNTFVKVS----EDLVCFAM  393 (431)
T ss_pred             cCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCC--CCCCCeEEEEE-CCCeeecCcceeEEEcC----CCcEEEEE
Confidence            999999999999998886432211 112457887432  24689999999 58999999999999753    34578898


Q ss_pred             EecCCCceeeCceEEeeEEEEEECCCCEEEEEeCCCCC
Q 010981          406 EKSPGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSL  443 (496)
Q Consensus       406 ~~~~~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~~c~~  443 (496)
                      ... ...||||+.|||++|+|||++++|||||+.+|++
T Consensus       394 ~~~-~~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        394 IPT-SSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             ecC-CCceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence            765 4569999999999999999999999999999974

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query496
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 4e-09
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 4e-08
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 4e-08
2q11_A388 Structure Of Bace Complexed To Compound 1 Length = 6e-08
2q15_A385 Structure Of Bace Complexed To Compound 3a Length = 6e-08
3bra_A409 Bace-1 Complexed With Compound 1 Length = 409 7e-08
2vie_A392 Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2- 7e-08
4b1d_A388 New Aminoimidazoles As Bace-1 Inhibitors: From Rati 7e-08
4b1c_A375 New Aminoimidazoles As Bace-1 Inhibitors: From Rati 7e-08
2hm1_A406 Crystal Structure Of Human Beta-Secretase (Bace) In 7e-08
2qk5_A395 Structure Of Bace1 Bound To Sch626485 Length = 395 7e-08
3udh_A404 Crystal Structure Of Bace With Compound 1 Length = 7e-08
2wjo_A412 Human Bace (Beta Secretase) In Complex With Cyclohe 7e-08
2fdp_A388 Crystal Structure Of Beta-Secretase Complexed With 7e-08
4dpf_A391 Bace-1 In Complex With A Hea-Macrocyclic Type Inhib 7e-08
2zjk_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 7e-08
3u6a_A390 Rational Design And Synthesis Of Aminopiperazinones 7e-08
1fkn_A391 Structure Of Beta-Secretase Complexed With Inhibito 7e-08
3r1g_B402 Structure Basis Of Allosteric Inhibition Of Bace1 B 7e-08
1tqf_A405 Crystal Structure Of Human Beta Secretase Complexed 7e-08
3l58_A414 Structure Of Bace Bound To Sch589432 Length = 414 7e-08
3kmx_A395 Structure Of Bace Bound To Sch346572 Length = 395 7e-08
3cib_A390 Structure Of Bace Bound To Sch727596 Length = 390 7e-08
4ewo_A386 Design And Synthesis Of Potent Hydroxyethylamine (H 8e-08
1sgz_A389 Crystal Structure Of Unbound Beta-Secretase Catalyt 8e-08
2zhr_A411 Crystal Structure Of Bace1 In Complex With Om99-2 A 8e-08
2zjn_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 8e-08
3ixk_A405 Potent Beta-Secretase 1 Inhibitor Length = 405 8e-08
3dm6_A406 Beta-Secretase 1 Complexed With Statine-Based Inhib 8e-08
2qu2_A415 Bace1 With Compound 1 Length = 415 8e-08
2qzl_A411 Crystal Structure Of Human Beta Secretase Complexed 8e-08
3exo_A413 Crystal Structure Of Bace1 Bound To Inhibitor Lengt 8e-08
2of0_A402 X-Ray Crystal Structure Of Beta Secretase Complexed 8e-08
3qi1_A408 Design And Synthesis Of Hydroxyethylamine (Hea) Bac 9e-08
3ckp_A412 Crystal Structure Of Bace-1 In Complex With Inhibit 9e-08
3hvg_A411 Structure Of Bace (Beta Secretase) In Complex With 9e-08
1ym4_A408 Crystal Structure Of Human Beta Secretase Complexed 9e-08
3tpr_A433 Crystal Structure Of Bace1 Complexed With An Inhibi 9e-08
1w50_A411 Apo Structure Of Bace (beta Secretase) Length = 411 9e-08
3vv6_A416 Crystal Structure Of Beta Secetase In Complex With 9e-08
1ym2_A402 Crystal Structure Of Human Beta Secretase Complexed 9e-08
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 9e-08
2zji_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 9e-08
3tpj_A433 Apo Structure Of Bace1 Length = 433 9e-08
3lpi_A455 Structure Of Bace Bound To Sch745132 Length = 455 1e-07
2hiz_A455 Crystal Structure Of Human Beta-Secretase (Bace) In 1e-07
2va5_A455 X-Ray Crystal Structure Of Beta Secretase Complexed 1e-07
2zjh_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 2e-07
2zjj_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 3e-07
3c9x_A329 Crystal Structure Of Trichoderma Reesei Aspartic Pr 7e-07
2h6s_A340 Secreted Aspartic Proteinase (sap) 3 From Candida A 7e-07
1htr_B329 Crystal And Molecular Structures Of Human Progastri 1e-06
1eag_A342 Secreted Aspartic Proteinase (Sap2) From Candida Al 4e-06
1j71_A334 Structure Of The Extracellular Aspartic Proteinase 7e-06
2qzw_A341 Secreted Aspartic Proteinase (Sap) 1 From Candida A 1e-05
1zap_A342 Secreted Aspartic Protease From C. Albicans Length 2e-05
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 3e-05
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 3e-05
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 5e-05
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 6e-05
1qdm_A478 Crystal Structure Of Prophytepsin, A Zymogen Of A B 1e-04
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 1e-04
1b5f_A239 Native Cardosin A From Cynara Cardunculus L. Length 2e-04
3fv3_A339 Secreted Aspartic Protease 1 From Candida Parapsilo 2e-04
3pep_A326 Revised 2.3 Angstroms Structure Of Porcine Pepsin. 2e-04
3psg_A370 The High Resolution Crystal Structure Of Porcine Pe 3e-04
4pep_A326 The Molecular And Crystal Structures Of Monoclinic 3e-04
1psa_A326 Structure Of A Pepsin(Slash)renin Inhibitor Complex 4e-04
2psg_A370 Refined Structure Of Porcine Pepsinogen At 1.8 Angs 4e-04
1f34_A326 Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou 6e-04
5pep_A326 X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim 8e-04
1smr_A335 The 3-D Structure Of Mouse Submaxillary Renin Compl 9e-04
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure 
Iteration: 1

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 155/403 (38%), Gaps = 87/403 (21%)
Query: 75  LIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSS 134
           L GDS   Y+ ++ +G+PP++  + +DTGS    V  +  S             +FDT  
Sbjct: 7   LQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTER 57
Query: 135 SSTARIVSCSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILG 194
           SST R                       S     + +Y  GS T              +G
Sbjct: 58  SSTYR-----------------------SKGFDVTVKYTQGSWT------------GFVG 82
Query: 195 ESLI----ANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQ--------LA 242
           E L+      +T+ +V   + +++ +        +GI G     L+  S         L 
Sbjct: 83  EDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLV 142
Query: 243 SRGITPRVFSH------CXXXXXXXXXXXXXXXXXEPS-----IVYSPLVPSKPHYNLNL 291
           ++   P VFS                         EPS     I Y+P +  + +Y + +
Sbjct: 143 TQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTP-IKEEWYYQIEI 201
Query: 292 HGITVNGQLLSIDPSAFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTM 351
             + + GQ L++D   +   N  + IVDSGTTL  L ++ FD  V A+      S+ P  
Sbjct: 202 LKLEIGGQSLNLDCREY---NADKAIVDSGTTLLRLPQKVFDAVVEAV---ARASLIPEF 255
Query: 352 SKG------KQCYLVSNSVSEIFPQVSLNFEGGAS-----MVLKPEEYLIHLGFYDGAAM 400
           S G        C+  S +    FP++S+      S     + + P+ Y+  +    G   
Sbjct: 256 SDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPM-MGAGLNY 314
Query: 401 WCIGFEKSPG-GVSILGDLVLKDKIFVYDLARQRVGWANYDCS 442
            C  F  SP     ++G  V++    ++D A++RVG+A   C+
Sbjct: 315 ECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|2Q11|A Chain A, Structure Of Bace Complexed To Compound 1 Length = 388 Back     alignment and structure
>pdb|2Q15|A Chain A, Structure Of Bace Complexed To Compound 3a Length = 385 Back     alignment and structure
>pdb|3BRA|A Chain A, Bace-1 Complexed With Compound 1 Length = 409 Back     alignment and structure
>pdb|2VIE|A Chain A, Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2-Hydroxy- 3-((1,1, 5-Trimethylhexyl)amino)propyl)-3-(Ethylamino)-5-(2- Oxopyrrolidin-1-Yl)benzamide Length = 392 Back     alignment and structure
>pdb|4B1D|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 388 Back     alignment and structure
>pdb|4B1C|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 375 Back     alignment and structure
>pdb|2HM1|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor (2) Length = 406 Back     alignment and structure
>pdb|2QK5|A Chain A, Structure Of Bace1 Bound To Sch626485 Length = 395 Back     alignment and structure
>pdb|3UDH|A Chain A, Crystal Structure Of Bace With Compound 1 Length = 404 Back     alignment and structure
>pdb|2WJO|A Chain A, Human Bace (Beta Secretase) In Complex With Cyclohexanecarboxylic Acid (2-(2-Am Ino-6-Phenoxy-4h- Quinazolin-3-Yl)-2-Cyclohexyl-Ethyl)-Amide Length = 412 Back     alignment and structure
>pdb|2FDP|A Chain A, Crystal Structure Of Beta-Secretase Complexed With An Amino- Ethylene Inhibitor Length = 388 Back     alignment and structure
>pdb|4DPF|A Chain A, Bace-1 In Complex With A Hea-Macrocyclic Type Inhibitor Length = 391 Back     alignment and structure
>pdb|2ZJK|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid(3-Mercapto-Propyl)-Amide Length = 405 Back     alignment and structure
>pdb|3U6A|A Chain A, Rational Design And Synthesis Of Aminopiperazinones As Beta Secretase (Bace) Inhibitors Length = 390 Back     alignment and structure
>pdb|1FKN|A Chain A, Structure Of Beta-Secretase Complexed With Inhibitor Length = 391 Back     alignment and structure
>pdb|3R1G|B Chain B, Structure Basis Of Allosteric Inhibition Of Bace1 By An Exosite- Binding Antibody Length = 402 Back     alignment and structure
>pdb|1TQF|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Inhibitor Length = 405 Back     alignment and structure
>pdb|3L58|A Chain A, Structure Of Bace Bound To Sch589432 Length = 414 Back     alignment and structure
>pdb|3KMX|A Chain A, Structure Of Bace Bound To Sch346572 Length = 395 Back     alignment and structure
>pdb|3CIB|A Chain A, Structure Of Bace Bound To Sch727596 Length = 390 Back     alignment and structure
>pdb|4EWO|A Chain A, Design And Synthesis Of Potent Hydroxyethylamine (Hea) Bace-1 Inhibitors Length = 386 Back     alignment and structure
>pdb|1SGZ|A Chain A, Crystal Structure Of Unbound Beta-Secretase Catalytic Domain. Length = 389 Back     alignment and structure
>pdb|2ZHR|A Chain A, Crystal Structure Of Bace1 In Complex With Om99-2 At Ph 5.0 Length = 411 Back     alignment and structure
>pdb|2ZJN|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(5-Chloro-2-Isopropoxy-3-Methoxy-Benzyl)- Piperidin-4-Yl]-2-(2-Methyl-4-Sulfamoyl-Phenoxy)- Acetamide Length = 405 Back     alignment and structure
>pdb|3IXK|A Chain A, Potent Beta-Secretase 1 Inhibitor Length = 405 Back     alignment and structure
>pdb|3DM6|A Chain A, Beta-Secretase 1 Complexed With Statine-Based Inhibitor Length = 406 Back     alignment and structure
>pdb|2QU2|A Chain A, Bace1 With Compound 1 Length = 415 Back     alignment and structure
>pdb|2QZL|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Ixs Length = 411 Back     alignment and structure
>pdb|3EXO|A Chain A, Crystal Structure Of Bace1 Bound To Inhibitor Length = 413 Back     alignment and structure
>pdb|2OF0|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 5 Length = 402 Back     alignment and structure
>pdb|3QI1|A Chain A, Design And Synthesis Of Hydroxyethylamine (Hea) Bace-1 Inhibitors: Prime Side Chromane-Containing Inhibitors Length = 408 Back     alignment and structure
>pdb|3CKP|A Chain A, Crystal Structure Of Bace-1 In Complex With Inhibitor Length = 412 Back     alignment and structure
>pdb|3HVG|A Chain A, Structure Of Bace (Beta Secretase) In Complex With Ev0 Length = 411 Back     alignment and structure
>pdb|1YM4|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Amk640 Length = 408 Back     alignment and structure
>pdb|3TPR|A Chain A, Crystal Structure Of Bace1 Complexed With An Inhibitor Length = 433 Back     alignment and structure
>pdb|1W50|A Chain A, Apo Structure Of Bace (beta Secretase) Length = 411 Back     alignment and structure
>pdb|3VV6|A Chain A, Crystal Structure Of Beta Secetase In Complex With 2-Amino-3-Methyl-6- ((1s, 2r)-2-Phenylcyclopropyl)pyrimidin-4(3h)-One Length = 416 Back     alignment and structure
>pdb|1YM2|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Aur200 Length = 402 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|2ZJI|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(2, 6-Dimethoxy-Benzyl)-Piperidin-4-Yl]-4-Mercapto- Butyramide Length = 405 Back     alignment and structure
>pdb|3TPJ|A Chain A, Apo Structure Of Bace1 Length = 433 Back     alignment and structure
>pdb|3LPI|A Chain A, Structure Of Bace Bound To Sch745132 Length = 455 Back     alignment and structure
>pdb|2HIZ|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor Length = 455 Back     alignment and structure
>pdb|2VA5|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 8c Length = 455 Back     alignment and structure
>pdb|2ZJH|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-(1-Benzyl-Piperidin-4-Yl)-4-Mercapto-Butyramide Length = 405 Back     alignment and structure
>pdb|2ZJJ|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid (2-Mercapto-Ethyl)- Amide Length = 405 Back     alignment and structure
>pdb|3C9X|A Chain A, Crystal Structure Of Trichoderma Reesei Aspartic Proteinase Length = 329 Back     alignment and structure
>pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans Length = 340 Back     alignment and structure
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans Complexed With A70450 Length = 342 Back     alignment and structure
>pdb|1J71|A Chain A, Structure Of The Extracellular Aspartic Proteinase From Candida Tropicalis Yeast Length = 334 Back     alignment and structure
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans Length = 341 Back     alignment and structure
>pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans Length = 342 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L. Length = 239 Back     alignment and structure
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 Back     alignment and structure
>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 Back     alignment and structure
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 Back     alignment and structure
>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 Back     alignment and structure
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 Back     alignment and structure
>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 Back     alignment and structure
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed With A Decapeptide Inhibitor Ch-66 Based On The 4-16 Fragment Of Rat Angiotensinogen Length = 335 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query496
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 4e-82
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 7e-74
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 5e-73
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 4e-44
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 9e-42
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-40
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 1e-38
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 1e-37
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 2e-37
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 5e-37
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 2e-35
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-34
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 5e-34
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 5e-34
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 9e-34
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 4e-33
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 7e-33
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 8e-33
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-32
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 3e-32
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 3e-32
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 3e-32
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 5e-32
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 8e-32
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 1e-31
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 3e-30
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 4e-30
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 7e-30
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 2e-29
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 2e-25
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 3e-24
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-04
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 4e-24
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 1e-16
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 7e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  259 bits (663), Expect = 4e-82
 Identities = 71/406 (17%), Positives = 134/406 (33%), Gaps = 45/406 (11%)

Query: 61  GVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQN 120
            +V  PVQ          S  L++  ++  +P  +  V +D   + LWV C    +    
Sbjct: 8   NLVVLPVQN-------DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKT- 59

Query: 121 SGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSG 180
                Q  F  ++  S A    C     AS        C         S          G
Sbjct: 60  ----YQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTC------GLMSTNPITQQTGLG 109

Query: 181 SYIYDTLYFDAILGESLIANSTALI---VFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSV 237
               D L   A  G +        +   +F C+           +   G+ G G   +S+
Sbjct: 110 ELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQ-KGLPRNTQGVAGLGHAPISL 168

Query: 238 ISQLASRGITPRVFSHCLKGQGNGGGILVLGEILEPS-----------IVYSPLVPSK-P 285
            +QLAS     R F+ CL       G ++ G+                + ++PL  +   
Sbjct: 169 PNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQG 228

Query: 286 HYNLNLHGITVNGQLLSIDPS---AFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITAT 342
            YN+ ++ I +N   +            S +  T++ + T    L +  +  F       
Sbjct: 229 EYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQ 288

Query: 343 VSQS-VTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMW 401
           + +     +++    C+  +   +     + ++   G    +  E+ ++         + 
Sbjct: 289 LPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQ----AQPGVT 344

Query: 402 CIGFEKS---PGGVSILGDLVLKDKIFVYDLARQRVGWANYDCSLS 444
           C+G       P     LG   L++ + V+DLAR RVG++       
Sbjct: 345 CLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSH 390
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query496
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.86
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.72
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 89.02
2hs1_A99 HIV-1 protease; ultra-high resolution active site 85.71
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 83.27
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 81.53
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=1.8e-58  Score=472.63  Aligned_cols=350  Identities=21%  Similarity=0.361  Sum_probs=279.8

Q ss_pred             CeeeeeccCCCCCcccCCcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCce
Q 010981           61 GVVEFPVQGSSDPFLIGDSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARI  140 (496)
Q Consensus        61 ~~~~~~~~~~~~~~~~g~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~  140 (496)
                      ..+.+|+.+..       .+++|+++|.||||||+|.|+|||||+++||+|..|                  ..|+|++.
T Consensus         7 ~~~~~pv~~d~-------~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~   61 (413)
T 3vla_A            7 SALVVPVKKDA-------STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRP   61 (413)
T ss_dssp             SEEEEEEEECT-------TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEE
T ss_pred             ccEEEEeeecC-------CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCc
Confidence            35678887642       234999999999999999999999999999998764                  25899999


Q ss_pred             ecCCCccccCccCCCCCCCCC------CCCCCeeeeEe-CCCCeEEEEEEEEEEEEeeecCCccc-ccccccEEEeeeee
Q 010981          141 VSCSDPLCASEIQTTATQCPS------GSNQCSYSFEY-GDGSGTSGSYIYDTLYFDAILGESLI-ANSTALIVFGCSTY  212 (496)
Q Consensus       141 v~C~~~~C~~~~~~~~~~c~~------~~~~~~~~~~Y-~~g~~~~G~~~~D~v~i~~~~~~~~~-~~~~~~~~fG~~~~  212 (496)
                      ++|.++.|.....+.+..|..      .++.|.|.+.| ++|+.+.|++++|+|+|++..+.... ...+.++.|||+..
T Consensus        62 v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~  141 (413)
T 3vla_A           62 VRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPT  141 (413)
T ss_dssp             CBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECG
T ss_pred             cCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccc
Confidence            999999998664433222221      24679999999 58888999999999999865443210 11356799999998


Q ss_pred             ccCCCCCCCCCcceeeecCCCCCchHHHHHhcCCCCceeEEeecCCCCccceEEeCCCCC---------CC-eEEeeCCC
Q 010981          213 QTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNGGGILVLGEILE---------PS-IVYSPLVP  282 (496)
Q Consensus       213 ~~~~~~~~~~~~~GIlGLg~~~~s~~~~l~~~g~i~~~FS~~l~~~~~~~G~l~~Gg~d~---------~~-l~~~pl~~  282 (496)
                      +.+..  ....+|||||||++.++++.||.++++++++||+||.+....+|+|+||++|.         ++ +.|+||+.
T Consensus       142 ~~~~g--~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~  219 (413)
T 3vla_A          142 SLLQN--LASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLT  219 (413)
T ss_dssp             GGGTT--SCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBC
T ss_pred             ccccC--cccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeeccc
Confidence            63221  13578999999999999999999999888999999998656789999999873         45 99999986


Q ss_pred             CC-------------CceeEEEeEEEEccEEeecCccccccc--CCCcEEEecccccccccHHHHHHHHHHHHHHhcc--
Q 010981          283 SK-------------PHYNLNLHGITVNGQLLSIDPSAFAAS--NNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQ--  345 (496)
Q Consensus       283 ~~-------------~~w~v~l~~i~v~~~~~~~~~~~~~~~--~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~--  345 (496)
                      ++             .+|.|+|++|+||++.+.++.+.+...  ....+||||||++++||+++|++|+++|.+++..  
T Consensus       220 ~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~  299 (413)
T 3vla_A          220 NPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARN  299 (413)
T ss_dssp             CSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTT
T ss_pred             CCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccC
Confidence            53             699999999999999998887766533  2468999999999999999999999999998751  


Q ss_pred             CcC-CCCCCCCceEEeeCCcc----ccCCeEEEEecC-CcEEEeCCCceEEEeeeeCCceEEEEEEEecC---CCceeeC
Q 010981          346 SVT-PTMSKGKQCYLVSNSVS----EIFPQVSLNFEG-GASMVLKPEEYLIHLGFYDGAAMWCIGFEKSP---GGVSILG  416 (496)
Q Consensus       346 ~~~-~~~~~~~~~y~~~c~~~----~~~P~i~f~f~g-g~~~~i~p~~y~~~~~~~~~~~~~cl~i~~~~---~~~~iLG  416 (496)
                      ... ........||.+++...    ..+|+|+|+|+| ++.|+|+|++|+++..    ++.+|++|...+   ...||||
T Consensus       300 ~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~----~~~~Cl~~~~~~~~~~~~~IlG  375 (413)
T 3vla_A          300 ITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN----DNVVCLGVVDGGSNLRTSIVIG  375 (413)
T ss_dssp             CCEECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE----TTEEEECEEEEESSCSSSEEEC
T ss_pred             CCcCCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC----CCcEEEEEEecCCCcccceeEe
Confidence            111 11223568999887532    479999999965 4899999999999753    246788998764   2579999


Q ss_pred             ceEEeeEEEEEECCCCEEEEEeCCC
Q 010981          417 DLVLKDKIFVYDLARQRVGWANYDC  441 (496)
Q Consensus       417 ~~fl~~~y~VfD~~~~~IGfa~~~c  441 (496)
                      +.|||++|+|||++++|||||++.+
T Consensus       376 d~fl~~~~vvfD~~~~riGfa~~~~  400 (413)
T 3vla_A          376 GHQLEDNLVQFDLATSRVGFSGTLL  400 (413)
T ss_dssp             HHHHTTEEEEEETTTTEEEEEEEGG
T ss_pred             hhhhcCeEEEEECCCCEEEEEEecc
Confidence            9999999999999999999998754
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 496
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-49
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 3e-47
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 1e-38
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 3e-38
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 3e-38
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 1e-37
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 2e-37
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 3e-36
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-35
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-35
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 9e-35
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 5e-34
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 8e-34
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 9e-33
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 9e-33
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 1e-32
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 3e-32
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 1e-31
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 2e-30
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 6e-30
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 2e-29
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 2e-24
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  172 bits (436), Expect = 1e-49
 Identities = 64/392 (16%), Positives = 127/392 (32%), Gaps = 58/392 (14%)

Query: 82  LYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIV 141
           LY      G+      + +D    ++W TC       +     I  +      ++     
Sbjct: 15  LYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAE-----IPCSSPTCLLANAYPAP 64

Query: 142 SCSDPLCASEIQTTATQCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANS 201
            C  P C S                +Y +    G+  +GS  +     +   G   ++  
Sbjct: 65  GCPAPSCGS--------DKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKV 116

Query: 202 TALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDLSVISQLASRGITPRVFSHCLKGQGNG 261
              ++  C+  +        +   G+ G     L++ +Q+AS       F  CL   G G
Sbjct: 117 NVGVLAACAPSKLLASL--PRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPG 174

Query: 262 GGILVLGEI----LEPSIVYSPLV--PSKPHYNLNLHGITVNGQLLSIDPSAFAASNNRE 315
             I   G +       S+ Y+PLV     P + ++   I V    + +   A A      
Sbjct: 175 VAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGG--- 231

Query: 316 TIVDSGTTLTYLVEEAFDPFVSAITATVSQS---------VTPTMSKGKQCY----LVSN 362
            ++ +      L  + + P + A T  ++               ++    CY    L +N
Sbjct: 232 VMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNN 291

Query: 363 SVSEIFPQVSLNFEGGASMVLKPEEYLIHLGFYDGAAMWCIGF--------EKSPGGVSI 414
                 P V L  +GG+   +  +  ++           C+ F                I
Sbjct: 292 LGGYAVPNVQLGLDGGSDWTMTGKNSMV----DVKQGTACVAFVEMKGVAAGDGRAPAVI 347

Query: 415 LGDLVLKDKIFVYDLARQRVGWA----NYDCS 442
           LG   ++D +  +D+ ++R+G++       C 
Sbjct: 348 LGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCG 379
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query496
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=3.3e-56  Score=449.55  Aligned_cols=301  Identities=29%  Similarity=0.465  Sum_probs=254.5

Q ss_pred             CcceeEEEEEEeCCCCcEEEEEEEcCCCeeEEeCCCCCCCCCCCCCCCCCCCCCCCCCCcCceecCCCccccCccCCCCC
Q 010981           78 DSYWLYFTKVKLGSPPKEFNVQIDTGSDILWVTCSSCSNCPQNSGLGIQLNFFDTSSSSTARIVSCSDPLCASEIQTTAT  157 (496)
Q Consensus        78 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~wv~~~~C~~C~~~~~~~~~~~~y~~~~SsT~~~v~C~~~~C~~~~~~~~~  157 (496)
                      +.+..|+++|+||||||+|.|+|||||+++||+|..|..|..+.     .+.|||++|+|++.                 
T Consensus        53 ~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~-----~~~yd~~~Sst~~~-----------------  110 (370)
T d3psga_          53 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSD-----HNQFNPDDSSTFEA-----------------  110 (370)
T ss_dssp             GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-----SCCBCGGGCTTCEE-----------------
T ss_pred             ccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCccccc-----ccccCCCccccccc-----------------
Confidence            44569999999999999999999999999999999999876542     48899999999974                 


Q ss_pred             CCCCCCCCCeeeeEeCCCCeEEEEEEEEEEEEeeecCCcccccccccEEEeeeeeccCCCCCCCCCcceeeecCCCCC--
Q 010981          158 QCPSGSNQCSYSFEYGDGSGTSGSYIYDTLYFDAILGESLIANSTALIVFGCSTYQTGDLSKTDKAIDGIFGFGQGDL--  235 (496)
Q Consensus       158 ~c~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~--  235 (496)
                            ..|.|.+.|++|+ +.|.++.|++.+++..        ..++.||++....+.+. .....+||+|||++..  
T Consensus       111 ------~~~~~~~~Yg~Gs-~~G~~~~d~~~~~~~~--------~~~~~f~~~~~~~~~~~-~~~~~~Gi~gl~~~~~~~  174 (370)
T d3psga_         111 ------TSQELSITYGTGS-MTGILGYDTVQVGGIS--------DTNQIFGLSETEPGSFL-YYAPFDGILGLAYPSISA  174 (370)
T ss_dssp             ------EEEEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG-GGCSCSEEEECSCGGGCG
T ss_pred             ------CCCcEEEEeCCce-EEEEEEEEEEeeecee--------eeeeEEEEEeeccCcee-cccccccccccccCcccc
Confidence                  4579999999998 7999999999998654        56789999998876543 2357799999998644  


Q ss_pred             ----chHHHHHhcCCCC-ceeEEeecCCCCccceEEeCCCC----CCCeEEeeCCCCCCceeEEEeEEEEccEEeecCcc
Q 010981          236 ----SVISQLASRGITP-RVFSHCLKGQGNGGGILVLGEIL----EPSIVYSPLVPSKPHYNLNLHGITVNGQLLSIDPS  306 (496)
Q Consensus       236 ----s~~~~l~~~g~i~-~~FS~~l~~~~~~~G~l~~Gg~d----~~~l~~~pl~~~~~~w~v~l~~i~v~~~~~~~~~~  306 (496)
                          .++.+|.++|+|+ ++||+|+.++...+|.|+||++|    ++++.|+|+. ...+|.|.++++.++|+.+..   
T Consensus       175 ~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~-~~~~w~v~~~~i~v~g~~~~~---  250 (370)
T d3psga_         175 SGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC---  250 (370)
T ss_dssp             GGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC---
T ss_pred             cCCCchhhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeec-ccceEEEEEeeEEeCCeEEec---
Confidence                4889999999997 89999999877778999999998    4789999986 678999999999999977643   


Q ss_pred             cccccCCCcEEEecccccccccHHHHHHHHHHHHHHhccCcCCCCCCCCceEEeeCCccccCCeEEEEecCCcEEEeCCC
Q 010981          307 AFAASNNRETIVDSGTTLTYLVEEAFDPFVSAITATVSQSVTPTMSKGKQCYLVSNSVSEIFPQVSLNFEGGASMVLKPE  386 (496)
Q Consensus       307 ~~~~~~~~~~iiDSGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~y~~~c~~~~~~P~i~f~f~gg~~~~i~p~  386 (496)
                          ..+..++|||||+++++|++++++|++++.+..         ..+++|.++|...+.+|+|+|+| +|.+++|+|+
T Consensus       251 ----~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~---------~~~~~~~~~C~~~~~~P~l~f~f-~g~~~~l~~~  316 (370)
T d3psga_         251 ----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE---------NSDGEMVISCSSIDSLPDIVFTI-DGVQYPLSPS  316 (370)
T ss_dssp             ----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE---------CTTCCEECCGGGGGGCCCEEEEE-TTEEEEECHH
T ss_pred             ----CCCccEEEecCCceEeCCHHHHHHHHHHhCCee---------ecCCcEEEeccccCCCceEEEEE-CCEEEEEChH
Confidence                244679999999999999999999999887653         23456889999888999999999 8999999999


Q ss_pred             ceEEEeeeeCCceEEEEEEEecC-----CCceeeCceEEeeEEEEEECCCCEEEEEeC
Q 010981          387 EYLIHLGFYDGAAMWCIGFEKSP-----GGVSILGDLVLKDKIFVYDLARQRVGWANY  439 (496)
Q Consensus       387 ~y~~~~~~~~~~~~~cl~i~~~~-----~~~~iLG~~fl~~~y~VfD~~~~~IGfa~~  439 (496)
                      +|+++.     ++.|++++...+     .+.||||++|||++|+|||++++|||||++
T Consensus       317 ~yi~~~-----~~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~  369 (370)
T d3psga_         317 AYILQD-----DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV  369 (370)
T ss_dssp             HHEEEC-----SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             HeEEEc-----CCeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEec
Confidence            999874     345777776543     457999999999999999999999999986
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure