Citrus Sinensis ID: 011000

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490------
MSGLTVARLQLFHYPSSTVRTTVISSKLHHSFPSSNRYRPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
cccccccccEEEccccccccHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccccEEEEEEcccEEEEEEEcccccccccEEEEEEcccccccccccccccccccEEEEEccccccEEEEEEccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHcEEEEccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEcccccccccccHHHHHHccccccEEEccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccc
ccccHHHHHHHHccccccccccEEccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccEEEccccccccccccEEEEEEcccEEEEEEEcccccccccEEEEEEcccccccEEccccccccccEEEEEcccccEEEEEEEccccEEEcccEEEEEcccccccccccccHHcccHHEEEccHHHccccccccccccccHccHHHHHHHHHHHccccHHHHccEEEEEEcccccEEcccccHHEccccHHHHHHHHHHHHHHHHHHcccHHcccccccEEEEEEccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHccEEEEcccHHccccccHHHcccccccccccccEEEEEccccccccHHHHHHHHHHHHHcccccEEEEEEccccccccHHHHHHHHcccEEEEcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccEEEcc
MSGLTVARLQlfhypsstvrttvissklhhsfpssnryrprtlhnfstsgiaqssssssIVGDLLDYlneswtpfhATAEAKRLLIDAGFELlnendewelkpgggyfftrNMSCLVAFAVGQKYSVGNGFHIiaahtdspclklkpksassksgrvivrgsdgsflHKLVkvkrpllrvptlaihldrtvnkdgfkpnletqlipllatkseetsvepkeksstssskvthhpqLMQILSQelgcgtddiASIELnicdtqpsclggannefifsgrldnlassyCGLRALIdscvspsnlsseHAIRMVALFdneevgsdsyqgagapTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVsadmahgvhpnfsekheehhrpemqkgLVIKHNANQRYATSGVTAFLFKEIAklhnlptqefvvrndmgcgstigpilasgvgirtVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
MSGLTVARLqlfhypsstvRTTVISSKLhhsfpssnryrpRTLHNFStsgiaqssssSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKlkpksassksgrvivrgsdgsflhklvkvkrpllrvptlaihldrtvnkdgfkpnlETQLIPllatkseetsvepkeksstssskvthhPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYesfssidkkLIVDF
MSGLTVARLQLFHYPSSTVRTTVISSKLHHSFPSSNRYRPRTLHNFSTSGIAQssssssIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDspclklkpksassksGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLAtkseetsvepkeksstssskvtHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
*****VARLQLFHYPSSTVRTTVI***********************************IVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTD******************IVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLL****************************MQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHG********************LVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLI***
***********************************************************IVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATK******************VTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
MSGLTVARLQLFHYPSSTVRTTVISSKLHHSFPSSNRYRPRTLHNFST**********SIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLK*********RVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATK*********************HPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNF***********MQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
***LTVARLQLFHYPSSTVRTTVISSKLHHSFPSSNRYRPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETS*************VTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSD*****GAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
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MSGLTVARLQLFHYPSSTVRTTVISSKLHHSFPSSNRYRPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVDF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query496 2.2.26 [Sep-21-2011]
B9RAJ0491 Probable aspartyl aminope N/A no 0.877 0.885 0.534 1e-143
Q9ULA0475 Aspartyl aminopeptidase O yes no 0.895 0.934 0.452 1e-114
Q5RBT2471 Aspartyl aminopeptidase O yes no 0.891 0.938 0.450 1e-113
Q2HJH1471 Aspartyl aminopeptidase O yes no 0.891 0.938 0.452 1e-113
Q54M70484 Aspartyl aminopeptidase O yes no 0.856 0.878 0.442 1e-112
Q9Z2W0473 Aspartyl aminopeptidase O yes no 0.897 0.940 0.443 1e-111
Q2UPZ7498 Aspartyl aminopeptidase O yes no 0.893 0.889 0.436 1e-107
O36014467 Aspartyl aminopeptidase 1 yes no 0.868 0.922 0.407 2e-97
Q19087470 Putative aspartyl aminope yes no 0.840 0.887 0.409 5e-90
P38821490 Aspartyl aminopeptidase 4 yes no 0.854 0.865 0.397 2e-88
>sp|B9RAJ0|DNPEP_RICCO Probable aspartyl aminopeptidase OS=Ricinus communis GN=RCOM_1506700 PE=2 SV=2 Back     alignment and function desciption
 Score =  510 bits (1313), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 258/483 (53%), Positives = 328/483 (67%), Gaps = 48/483 (9%)

Query: 59  SIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVA 118
           SI  DL+++LN S T FHA  EAK+ L  +G+  ++E D+W+L+ G  YFFTRN S +VA
Sbjct: 12  SIDSDLINFLNASPTAFHAIDEAKKRLKHSGYVQVSERDDWKLELGKRYFFTRNHSTIVA 71

Query: 119 FAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSG----------------------- 155
           FA+G+KY  GNGF+++ AHTDSPC+KLKP S  +KSG                       
Sbjct: 72  FAIGKKYVAGNGFYVVGAHTDSPCIKLKPVSKVTKSGYLEVGVQPYGGGLWHTWFDRDLA 131

Query: 156 ---RVIVRGSDG---SFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLA 209
              RVIVR       S+ H+LV+++ P++RVPTLAIHLDR VN DGFK N ++ L+P+LA
Sbjct: 132 VAGRVIVREEKHGSVSYSHRLVRIEEPIMRVPTLAIHLDRNVNTDGFKVNTQSHLLPVLA 191

Query: 210 T--KSEETSV--------EPKEKSSTSSSKVT------HHPQLMQILSQELGCGTDDIAS 253
           T  K+E + V          +E     SSK T      HH  L+Q+++ ++GC   DI  
Sbjct: 192 TSVKAELSKVVAENGTVGNDEETDGMKSSKGTTNANSKHHSLLLQMIAGQIGCNGSDICD 251

Query: 254 IELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVAL 313
            EL  CDTQPS + GA  EFIFSGRLDNL  S+C L+ALID+  S S+L +E  +RMVAL
Sbjct: 252 FELQACDTQPSVIAGAAKEFIFSGRLDNLCMSFCSLKALIDATASDSHLENESGVRMVAL 311

Query: 314 FDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHP 373
           FD+EEVGSDS QGAG+P MF A+ RI  +   +          I++SFLVSADMAH +HP
Sbjct: 312 FDHEEVGSDSAQGAGSPVMFDALSRITSTFNSD---SKLLRKAIQKSFLVSADMAHALHP 368

Query: 374 NFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGC 433
           N+++KHEE+H+P M  GLVIKHNANQRYAT+ VT+FLFKEIA  HNLP Q+FVVRNDM C
Sbjct: 369 NYADKHEENHQPRMHGGLVIKHNANQRYATNSVTSFLFKEIASKHNLPVQDFVVRNDMPC 428

Query: 434 GSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLI 493
           GSTIGPILASGVGIRTVD G  QLSMHS+RE+C  +D+  +Y HFKAF+E FS +D K+ 
Sbjct: 429 GSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKYSYEHFKAFFEDFSHLDSKIT 488

Query: 494 VDF 496
           VD 
Sbjct: 489 VDM 491
Likely to play an important role in intracellular protein and peptide metabolism.
Ricinus communis (taxid: 3988)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 2EC: 1
>sp|Q9ULA0|DNPEP_HUMAN Aspartyl aminopeptidase OS=Homo sapiens GN=DNPEP PE=1 SV=1 Back     alignment and function description
>sp|Q5RBT2|DNPEP_PONAB Aspartyl aminopeptidase OS=Pongo abelii GN=DNPEP PE=2 SV=1 Back     alignment and function description
>sp|Q2HJH1|DNPEP_BOVIN Aspartyl aminopeptidase OS=Bos taurus GN=DNPEP PE=1 SV=1 Back     alignment and function description
>sp|Q54M70|DNPEP_DICDI Aspartyl aminopeptidase OS=Dictyostelium discoideum GN=dnpep PE=1 SV=1 Back     alignment and function description
>sp|Q9Z2W0|DNPEP_MOUSE Aspartyl aminopeptidase OS=Mus musculus GN=Dnpep PE=2 SV=2 Back     alignment and function description
>sp|Q2UPZ7|DNPEP_ASPOR Aspartyl aminopeptidase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=dapA PE=1 SV=1 Back     alignment and function description
>sp|O36014|DNPEP_SCHPO Aspartyl aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aap1 PE=1 SV=1 Back     alignment and function description
>sp|Q19087|DNPEP_CAEEL Putative aspartyl aminopeptidase OS=Caenorhabditis elegans GN=F01F1.9 PE=1 SV=1 Back     alignment and function description
>sp|P38821|DNPEP_YEAST Aspartyl aminopeptidase 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query496
224097624462 predicted protein [Populus trichocarpa] 0.879 0.943 0.794 0.0
225464136535 PREDICTED: aspartyl aminopeptidase [Viti 0.893 0.828 0.794 0.0
255568036526 Aspartyl aminopeptidase, putative [Ricin 0.989 0.933 0.713 0.0
15238278526 aspartyl aminopeptidase [Arabidopsis tha 0.887 0.836 0.773 0.0
26452642526 putative aspartyl aminopeptidase [Arabid 0.887 0.836 0.771 0.0
297810563525 hypothetical protein ARALYDRAFT_487250 [ 0.887 0.838 0.764 0.0
357442997550 Aspartyl aminopeptidase [Medicago trunca 0.939 0.847 0.706 0.0
449466260527 PREDICTED: probable aspartyl aminopeptid 0.995 0.937 0.694 0.0
356576295518 PREDICTED: aspartyl aminopeptidase-like 0.895 0.857 0.741 0.0
357126946520 PREDICTED: aspartyl aminopeptidase-like 0.907 0.865 0.718 0.0
>gi|224097624|ref|XP_002311016.1| predicted protein [Populus trichocarpa] gi|222850836|gb|EEE88383.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/463 (79%), Positives = 397/463 (85%), Gaps = 27/463 (5%)

Query: 59  SIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVA 118
           SIVGDLLDYLNESWT FHATAEAKR LIDAGF+LLNEN+EWELKPGG YFFTRNMSCLVA
Sbjct: 1   SIVGDLLDYLNESWTQFHATAEAKRQLIDAGFDLLNENEEWELKPGGRYFFTRNMSCLVA 60

Query: 119 FAVGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKS------------------------ 154
           FA+G+KYSVGNGFH+IAAHTDSPCLKLKP+SASSKS                        
Sbjct: 61  FAIGEKYSVGNGFHVIAAHTDSPCLKLKPRSASSKSSYLMVNVQTYGGGLWHTWFDRDLS 120

Query: 155 --GRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKS 212
             GRVIVRGSDGSFLHKLVK+KRPLLR+PTLAIHLD TVNKDGFKPNLET LIPLLATKS
Sbjct: 121 VAGRVIVRGSDGSFLHKLVKIKRPLLRIPTLAIHLDHTVNKDGFKPNLETHLIPLLATKS 180

Query: 213 EETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNE 272
           EE S E KEK+ T SSK  HHP LMQ+LS EL C  DDI SIELN+CDTQPSCLGG NNE
Sbjct: 181 EEGSSETKEKN-TESSKAVHHPLLMQVLSDELSCSIDDIVSIELNVCDTQPSCLGGGNNE 239

Query: 273 FIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTM 332
           FIFSGRLDNLASSYC LRALIDSC S S+LS++ A+RM+ALFDNEEVGS S QGAGAPTM
Sbjct: 240 FIFSGRLDNLASSYCALRALIDSCESSSDLSNDTAVRMIALFDNEEVGSGSVQGAGAPTM 299

Query: 333 FQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLV 392
           FQA++RI G LA  +V+E + E  IRQSFLVSADMAHGVHPNF EKHEEHHRPEMQKGLV
Sbjct: 300 FQAMKRIAGCLARNNVNEGAIERAIRQSFLVSADMAHGVHPNFMEKHEEHHRPEMQKGLV 359

Query: 393 IKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDC 452
           IKHNANQRYATSGVTAFLFKE+ K+HNLP+QEFVVRNDMGCGSTIGPILASG GIRTVDC
Sbjct: 360 IKHNANQRYATSGVTAFLFKEVGKIHNLPSQEFVVRNDMGCGSTIGPILASGAGIRTVDC 419

Query: 453 GIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 495
           GI QLSMHSVREIC  ED+DIAY++FKAFY++FSSIDKKL VD
Sbjct: 420 GIPQLSMHSVREICAKEDVDIAYKYFKAFYQNFSSIDKKLEVD 462

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225464136|ref|XP_002266672.1| PREDICTED: aspartyl aminopeptidase [Vitis vinifera] gi|296087973|emb|CBI35256.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255568036|ref|XP_002524995.1| Aspartyl aminopeptidase, putative [Ricinus communis] gi|223535739|gb|EEF37402.1| Aspartyl aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15238278|ref|NP_196091.1| aspartyl aminopeptidase [Arabidopsis thaliana] gi|7413533|emb|CAB86013.1| aspartyl aminopeptidase-like protein [Arabidopsis thaliana] gi|9758446|dbj|BAB08975.1| aspartyl aminopeptidase [Arabidopsis thaliana] gi|332003391|gb|AED90774.1| aspartyl aminopeptidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|26452642|dbj|BAC43404.1| putative aspartyl aminopeptidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297810563|ref|XP_002873165.1| hypothetical protein ARALYDRAFT_487250 [Arabidopsis lyrata subsp. lyrata] gi|297319002|gb|EFH49424.1| hypothetical protein ARALYDRAFT_487250 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357442997|ref|XP_003591776.1| Aspartyl aminopeptidase [Medicago truncatula] gi|355480824|gb|AES62027.1| Aspartyl aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449466260|ref|XP_004150844.1| PREDICTED: probable aspartyl aminopeptidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356576295|ref|XP_003556268.1| PREDICTED: aspartyl aminopeptidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357126946|ref|XP_003565148.1| PREDICTED: aspartyl aminopeptidase-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query496
TAIR|locus:2175423526 AT5G04710 [Arabidopsis thalian 0.683 0.644 0.782 2.7e-180
TAIR|locus:2143990477 AT5G60160 [Arabidopsis thalian 0.679 0.706 0.545 5.7e-124
UNIPROTKB|F1PVI2471 DNPEP "Uncharacterized protein 0.677 0.713 0.481 2.9e-99
DICTYBASE|DDB_G0286149484 dnpep "aspartyl aminopeptidase 0.671 0.688 0.460 3.7e-99
UNIPROTKB|E7ETB3493 DNPEP "Aspartyl aminopeptidase 0.677 0.681 0.475 3.3e-98
UNIPROTKB|Q9ULA0475 DNPEP "Aspartyl aminopeptidase 0.677 0.707 0.475 8.7e-98
UNIPROTKB|Q2HJH1471 DNPEP "Aspartyl aminopeptidase 0.677 0.713 0.469 1.1e-97
RGD|1583848475 Dnpep "aspartyl aminopeptidase 0.778 0.812 0.428 5.4e-96
MGI|MGI:1278328473 Dnpep "aspartyl aminopeptidase 0.778 0.816 0.423 8.8e-96
UNIPROTKB|F1NWA8444 DNPEP "Uncharacterized protein 0.675 0.754 0.471 1.6e-92
TAIR|locus:2175423 AT5G04710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1402 (498.6 bits), Expect = 2.7e-180, Sum P(2) = 2.7e-180
 Identities = 267/341 (78%), Positives = 295/341 (86%)

Query:   155 GRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLAXXXXX 214
             GR IVR SDGSF+H+LVKVKRPLLRVPTLAIHLDRTVN DGFKPNLETQL+PLLA     
Sbjct:   187 GRAIVRASDGSFVHRLVKVKRPLLRVPTLAIHLDRTVNSDGFKPNLETQLVPLLATKSDE 246

Query:   215 XXXXXXXXXXXXXXXXXHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFI 274
                              HHP LMQILS +L C  +DI S+ELNICDTQPSCLGGANNEFI
Sbjct:   247 SSAESKDKNVSSKDA--HHPLLMQILSDDLDCKVEDIVSLELNICDTQPSCLGGANNEFI 304

Query:   275 FSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQ 334
             FSGRLDNLASS+C LRALIDSC S  NLS+EH IRM+ALFDNEEVGSDS QGAGAPTMFQ
Sbjct:   305 FSGRLDNLASSFCALRALIDSCESSENLSTEHDIRMIALFDNEEVGSDSCQGAGAPTMFQ 364

Query:   335 AIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIK 394
             A+RRIV SL ++ V+E +F+  IR+SFLVSADMAHGVHPNF++KHEE+HRP++ KGLVIK
Sbjct:   365 AMRRIVSSLGNKQVTECTFDRAIRKSFLVSADMAHGVHPNFADKHEENHRPQLHKGLVIK 424

Query:   395 HNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI 454
             HNANQRYATSG+T+FLFKE+AKLH+LP QEFVVRNDMGCGSTIGPILASGVGIRTVDCGI
Sbjct:   425 HNANQRYATSGITSFLFKEVAKLHDLPIQEFVVRNDMGCGSTIGPILASGVGIRTVDCGI 484

Query:   455 AQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD 495
             AQLSMHSVREICGT+DIDIAYRHFKAFY SFSS+DKKL+VD
Sbjct:   485 AQLSMHSVREICGTDDIDIAYRHFKAFYRSFSSVDKKLVVD 525
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0005773 "vacuole" evidence=ISS
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0009570 "chloroplast stroma" evidence=IDA
TAIR|locus:2143990 AT5G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1PVI2 DNPEP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286149 dnpep "aspartyl aminopeptidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E7ETB3 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9ULA0 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q2HJH1 DNPEP "Aspartyl aminopeptidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1583848 Dnpep "aspartyl aminopeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1278328 Dnpep "aspartyl aminopeptidase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NWA8 DNPEP "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q2HJH1DNPEP_BOVIN3, ., 4, ., 1, 1, ., 2, 10.45260.89110.9384yesno
Q19087DNPEP_CAEEL3, ., 4, ., 1, 1, ., 2, 10.40910.84070.8872yesno
O36014DNPEP_SCHPO3, ., 4, ., 1, 1, ., 2, 10.40750.86890.9229yesno
B9RAJ0DNPEP_RICCO3, ., 4, ., 1, 1, ., 2, 10.53410.87700.8859N/Ano
Q5RBT2DNPEP_PONAB3, ., 4, ., 1, 1, ., 2, 10.45050.89110.9384yesno
Q9ULA0DNPEP_HUMAN3, ., 4, ., 1, 1, ., 2, 10.45280.89510.9347yesno
Q54M70DNPEP_DICDI3, ., 4, ., 1, 1, ., 2, 10.44250.85680.8780yesno
P38821DNPEP_YEAST3, ., 4, ., 1, 1, ., 2, 10.39740.85480.8653yesno
Q9Z2W0DNPEP_MOUSE3, ., 4, ., 1, 1, ., 2, 10.44350.89710.9408yesno
Q2UPZ7DNPEP_ASPOR3, ., 4, ., 1, 1, ., 2, 10.43620.89310.8895yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.210.914
3rd Layer3.4.110.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00001643001
SubName- Full=Chromosome undetermined scaffold_119, whole genome shotgun sequence; (492 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query496
cd05658424 cd05658, M18_DAP, M18 Peptidase Aspartyl aminopept 0.0
PTZ00371465 PTZ00371, PTZ00371, aspartyl aminopeptidase; Provi 0.0
PRK02813428 PRK02813, PRK02813, putative aminopeptidase 2; Pro 1e-172
pfam02127425 pfam02127, Peptidase_M18, Aminopeptidase I zinc me 1e-154
COG1362437 COG1362, LAP4, Aspartyl aminopeptidase [Amino acid 1e-152
cd05639427 cd05639, M18, M18 Peptidase aminopeptidase family 1e-127
cd05659443 cd05659, M18_API, M18 Peptidase Aminopeptidase I 4e-43
PRK02256462 PRK02256, PRK02256, putative aminopeptidase 1; Pro 3e-32
cd05656336 cd05656, M42_Frv, M42 Peptidase, Endoglucanases 2e-04
>gnl|CDD|193534 cd05658, M18_DAP, M18 Peptidase Aspartyl aminopeptidase Back     alignment and domain information 
 Score =  622 bits (1608), Expect = 0.0
 Identities = 214/447 (47%), Positives = 275/447 (61%), Gaps = 51/447 (11%)

Query: 63  DLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVG 122
           DLLD+++ S +PFHA AE K+ L  AGF  L+E ++W LKPGG Y+ TRN S L+AF VG
Sbjct: 3   DLLDFIDASPSPFHAVAEMKKRLEAAGFTELDEREKWNLKPGGKYYVTRNGSSLIAFTVG 62

Query: 123 QKYSVGNGFHIIAAHTDSPCLKLKPKSASSKS--------------------------GR 156
           +KY  GNGF I+ AHTDSPCLKLKP    +                            GR
Sbjct: 63  EKYKPGNGFRIVGAHTDSPCLKLKPNPEITSEGYLQLGVEVYGGGLLNTWFDRDLSLAGR 122

Query: 157 VIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNLETQLIPLLATKSEETS 216
           V+V+  DG    KLV + RP+LR+P LAIHL+R VN +GFK N +  L+P+L    E+  
Sbjct: 123 VVVKDGDGKPESKLVDIDRPILRIPNLAIHLNREVN-EGFKLNKQKHLLPILGLGEEDEK 181

Query: 217 VEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFS 276
                          H   L+ +L++ELG   +DI   +L + DTQP  LGG N+EFI S
Sbjct: 182 ---------------HEDDLLDLLAEELGVKPEDILDFDLYLYDTQPGALGGLNDEFISS 226

Query: 277 GRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAI 336
            RLDNLAS Y  L AL+D+       +    I ++ALFDNEEVGS+S QGA +P +   +
Sbjct: 227 PRLDNLASVYAALEALLDAE------NDNSGINVIALFDNEEVGSESKQGADSPFLEDVL 280

Query: 337 RRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHN 396
            RI  +L     S   +   + +SFL+SADMAH VHPN+ EKH+ +HRP +  G VIK N
Sbjct: 281 ERIAAALGG---SREEYYRALARSFLISADMAHAVHPNYPEKHDPNHRPLLNGGPVIKIN 337

Query: 397 ANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQ 456
           ANQRYAT  V+A +FKE+ +   +P QEFV RNDM CGSTIGPI AS +GIRTVD GI Q
Sbjct: 338 ANQRYATDAVSAAVFKELCEKAGVPVQEFVNRNDMPCGSTIGPITASRLGIRTVDIGIPQ 397

Query: 457 LSMHSVREICGTEDIDIAYRHFKAFYE 483
           LSMHS+RE  G +D++   R  KAF+E
Sbjct: 398 LSMHSIRETAGVKDVEYLIRLLKAFFE 424

Peptidase M18 family, Aspartyl aminopeptidase (DAP; EC 3.4.11.21) subfamily. DAP is widely distributed in bacteria and eukaryotes, but only the mammalian aspartyl aminopeptidase has been characterized to date. DAP cleaves only unblocked N-terminal acidic amino-acid residues. It is a cytosolic enzyme and is highly conserved; for example, the human enzyme has 51% identity to an aspartyl aminopeptidase-like protein in Arabidopsis thaliana. The mammalian DAP is highly selective for hydrolysis of N-terminal aspartate or glutamate residues from peptides. Unlike glutamyl aminopeptidase (M42), DAP does not cleave simple aminoaryl-arylamide substrates. Although there is lack of understanding of the function of this enzyme, it is thought to act in concert with other aminopeptidases to facilitate protein turnover because of their restricted specificities for the N-terminal aspartic and glutamic acid, which cannot be cleaved by any other aminopeptidases. The mammalian aspartyl aminopeptidase is possibly contributing to the catabolism of peptides, including those produced by the proteasome. It may also trim the N-terminus of peptides that are intended for the MHC class I system. In humans, DAP has been implicated in the the specific function of converting angiotensin II to the vasoactive angiotensin III within the brain. Length = 424
>gnl|CDD|240387 PTZ00371, PTZ00371, aspartyl aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|235073 PRK02813, PRK02813, putative aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|216888 pfam02127, Peptidase_M18, Aminopeptidase I zinc metalloprotease (M18) Back     alignment and domain information
>gnl|CDD|224281 COG1362, LAP4, Aspartyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|193518 cd05639, M18, M18 Peptidase aminopeptidase family Back     alignment and domain information
>gnl|CDD|193535 cd05659, M18_API, M18 Peptidase Aminopeptidase I Back     alignment and domain information
>gnl|CDD|235018 PRK02256, PRK02256, putative aminopeptidase 1; Provisional Back     alignment and domain information
>gnl|CDD|193532 cd05656, M42_Frv, M42 Peptidase, Endoglucanases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 496
KOG2596479 consensus Aminopeptidase I zinc metalloprotease (M 100.0
COG1362437 LAP4 Aspartyl aminopeptidase [Amino acid transport 100.0
PTZ00371465 aspartyl aminopeptidase; Provisional 100.0
PF02127432 Peptidase_M18: Aminopeptidase I zinc metalloprotea 100.0
PRK02813428 putative aminopeptidase 2; Provisional 100.0
PRK02256462 putative aminopeptidase 1; Provisional 100.0
PRK09864356 putative peptidase; Provisional 100.0
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 100.0
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 100.0
PRK09961344 exoaminopeptidase; Provisional 100.0
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 100.0
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 100.0
TIGR01882410 peptidase-T peptidase T. This model represents a t 98.76
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 98.44
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 97.96
TIGR01883361 PepT-like peptidase T-like protein. This model rep 97.41
PRK13381404 peptidase T; Provisional 96.93
PRK05469408 peptidase T; Provisional 96.91
PRK08554438 peptidase; Reviewed 96.73
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 96.53
PRK12891414 allantoate amidohydrolase; Reviewed 96.24
PRK07338402 hypothetical protein; Provisional 96.21
PRK07473376 carboxypeptidase; Provisional 96.15
PRK08652347 acetylornithine deacetylase; Provisional 95.95
PRK06837427 acetylornithine deacetylase; Provisional 95.89
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 95.88
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 95.83
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 95.55
PRK13983400 diaminopimelate aminotransferase; Provisional 95.36
PRK12890414 allantoate amidohydrolase; Reviewed 95.28
PRK09290413 allantoate amidohydrolase; Reviewed 95.27
PRK04443348 acetyl-lysine deacetylase; Provisional 95.14
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 94.8
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 94.8
PRK06915422 acetylornithine deacetylase; Validated 94.8
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 94.74
PRK00466346 acetyl-lysine deacetylase; Validated 94.5
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 94.27
PRK13004399 peptidase; Reviewed 94.19
PRK08596421 acetylornithine deacetylase; Validated 94.16
PRK08737364 acetylornithine deacetylase; Provisional 93.87
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 93.84
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 93.8
PRK09133472 hypothetical protein; Provisional 93.64
PRK12893412 allantoate amidohydrolase; Reviewed 93.28
PRK07318466 dipeptidase PepV; Reviewed 93.2
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 93.2
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 93.0
PRK12892412 allantoate amidohydrolase; Reviewed 92.63
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 92.34
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 92.21
PRK06446436 hypothetical protein; Provisional 92.05
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 91.96
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 91.84
PRK07906426 hypothetical protein; Provisional 91.76
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 91.61
PRK07079469 hypothetical protein; Provisional 91.36
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 91.25
PRK07522385 acetylornithine deacetylase; Provisional 90.3
PRK09104464 hypothetical protein; Validated 90.28
PRK06133410 glutamate carboxypeptidase; Reviewed 89.2
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 88.94
PRK05111383 acetylornithine deacetylase; Provisional 88.88
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 87.79
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 87.71
PRK13381404 peptidase T; Provisional 87.2
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 86.92
PRK15026 485 aminoacyl-histidine dipeptidase; Provisional 86.92
PRK08201456 hypothetical protein; Provisional 86.58
PRK12891414 allantoate amidohydrolase; Reviewed 86.42
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 86.15
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 85.95
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 84.77
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 84.26
PRK06156520 hypothetical protein; Provisional 83.56
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 83.37
PRK12890414 allantoate amidohydrolase; Reviewed 83.32
COG4187 553 RocB Arginine degradation protein (predicted deacy 83.02
PRK07338402 hypothetical protein; Provisional 82.95
PRK07205444 hypothetical protein; Provisional 82.91
PRK07907449 hypothetical protein; Provisional 82.57
PRK12892412 allantoate amidohydrolase; Reviewed 82.24
TIGR01883361 PepT-like peptidase T-like protein. This model rep 82.04
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 81.95
PRK05469408 peptidase T; Provisional 81.87
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 81.65
PRK08262486 hypothetical protein; Provisional 81.16
PRK08596421 acetylornithine deacetylase; Validated 80.74
KOG2195 702 consensus Transferrin receptor and related protein 80.52
PLN02280478 IAA-amino acid hydrolase 80.19
>KOG2596 consensus Aminopeptidase I zinc metalloprotease (M18) [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.8e-118  Score=895.59  Aligned_cols=436  Identities=59%  Similarity=0.952  Sum_probs=406.0

Q ss_pred             cchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEE
Q 011000           55 SSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHII  134 (496)
Q Consensus        55 ~~~~~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi  134 (496)
                      ....++|++|++|||+||||||||++++++|.++||++|.|++.|.++||+|||++||+++|+||.+|++|.+++||-||
T Consensus        12 ~~~~s~a~efl~fln~spTpfHav~e~k~~Ll~agF~~LsE~~~W~iepg~kyf~tRN~S~iiAFavG~ky~pgnGf~ii   91 (479)
T KOG2596|consen   12 ECKSSAAQEFLDFLNKSPTPFHAVQEFKERLLKAGFKELSEKSDWQIEPGGKYFVTRNGSSIIAFAVGGKYVPGNGFSII   91 (479)
T ss_pred             hhhHHHHHHHHHHHhcCCCchHHHHHHHHHHHHccchhcccccCcccCCCceEEEEccCceEEEEeccCcccCCCceeEE
Confidence            34466899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccCCceeeeeCCCCCCC--------------------------cEEEEEc-CCCcEEEEEEEcCCCeEEcCCCCccc
Q 011000          135 AAHTDSPCLKLKPKSASSKS--------------------------GRVIVRG-SDGSFLHKLVKVKRPLLRVPTLAIHL  187 (496)
Q Consensus       135 ~AH~Dspgl~VKpi~~~~~~--------------------------G~V~~~~-~~G~~~~~lv~~~~pv~vIp~laiHL  187 (496)
                      +||||||||+|||++.....                          |||.++. .+|++.++||+.++|+++||+|||||
T Consensus        92 gaHtDSpcLrlKP~Sk~s~~gylqVgV~tYGGgiw~tWfDRDLsvaGRvivk~~~~~~~~~~LV~v~rPllrIPtLAiHl  171 (479)
T KOG2596|consen   92 GAHTDSPCLRLKPVSKRSAEGYLQVGVETYGGGIWHTWFDRDLSVAGRVIVKEAGDGKLIHRLVDVKRPLLRIPTLAIHL  171 (479)
T ss_pred             EecCCCcceeecccccccccceEEEEEeecCCccchhhccccccccceEEEEecCCcceeeeeecCCCceeeccceeeec
Confidence            99999999999999965433                          9999985 35789999999999999999999999


Q ss_pred             ccccccCCCCCCCccceeeeeeccCCcccCC---ccccCC--CCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecC
Q 011000          188 DRTVNKDGFKPNLETQLIPLLATKSEETSVE---PKEKSS--TSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQ  262 (496)
Q Consensus       188 ~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~---~~~~~~--~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~  262 (496)
                      +++.| ++|++|.+++|.|++|....+++++   +.++++  ..+.+++|++.||.++|+++|++++||++|||+++|.|
T Consensus       172 dr~~n-~~f~pn~EtqlvPil~t~~~~~~~~~e~~~~~~~~~~~~~~~~Hhp~Ll~liak~lg~~~edIvd~eL~l~Dtq  250 (479)
T KOG2596|consen  172 DRDVN-EGFKPNTETQLVPILGTAIPAEEEKTEKPSDDGDKPRNSSKGKHHPVLLGLIAKELGCTPEDIVDFELILYDTQ  250 (479)
T ss_pred             CCccc-ccCCCCccceeeeeecccCchhhhcCCCCCCCCccccccccccccHHHHHHHHHHhCCCHHHhhheeeeeecCC
Confidence            99998 7899999999999999876542211   112222  36678899999999999999999999999999999999


Q ss_pred             CccccCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhh
Q 011000          263 PSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGS  342 (496)
Q Consensus       263 ~~~~~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~  342 (496)
                      |++++|+++|||.++|||||.||||++.||+++... .++++++.+.++++||||||||.+||||.|.|++++|+||..+
T Consensus       251 ~a~lgG~~~eFiFs~RLDnl~~sF~al~aLi~s~~~-~~l~~e~~ir~valfDnEEvGS~SaQGA~s~~l~~vl~Riss~  329 (479)
T KOG2596|consen  251 KATLGGANDEFIFSPRLDNLLSSFCALQALIDSAEG-ESLENESGIRMVALFDNEEVGSDSAQGAGSPFLESVLRRISSL  329 (479)
T ss_pred             chhhcCcccceeecccccchhhHHHHHHHHHHHhcC-CCcccCCCeEEEEeccchhhcchhhccCCCccHHHHHHHHHHh
Confidence            999999999999999999999999999999998654 3566677899999999999999999999999999999999998


Q ss_pred             ccCCCCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCE
Q 011000          343 LAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPT  422 (496)
Q Consensus       343 ~~~~~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~  422 (496)
                      ++.   ....+.+++++||+||+||+||+||||+++|+++|+|.|++|||||+|+||||+||....++++++|+++++|+
T Consensus       330 ~~~---~~~~~~~ai~kSflvSADmaHa~hPNy~~kheenH~P~~h~G~vik~naNqryaTn~v~~~l~kevA~~~~vpl  406 (479)
T KOG2596|consen  330 FGS---FPTAFEEAIAKSFLVSADMAHAVHPNYSDKHEENHRPLLHGGPVIKVNANQRYATNSVGSALVKEVAELAKVPL  406 (479)
T ss_pred             cCC---CchHHHHHhhhheeeehhhhhhcCCCchhhhhhccCCccCCCceEEEcCCcceeccchhHHHHHHHHHHcCCCc
Confidence            874   56789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEeccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhccccccccccc
Q 011000          423 QEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD  495 (496)
Q Consensus       423 Q~~~~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~~~~~~~~~  495 (496)
                      |.|++|||++||||||||+|+++||+|+|+|+|||+|||+||||+.+|++.++++|++||++|..++.++.+|
T Consensus       407 Q~fvVrNdspcGsTIGPiLAS~~G~RTlDlG~pqLsMHSiRe~~gs~dv~~~~~lFk~Ff~~f~sv~~~~~vd  479 (479)
T KOG2596|consen  407 QDFVVRNDSPCGSTIGPILASKTGIRTLDLGIPQLSMHSIREMCGSKDVEQAVKLFKGFFERFSSVESKLVVD  479 (479)
T ss_pred             eeEEEecCCCCccccchhhhhhcCceeeecCchhhhhHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999998775

>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00371 aspartyl aminopeptidase; Provisional Back     alignment and domain information
>PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query496
4dyo_A485 Crystal Structure Of Human Aspartyl Aminopeptidase 1e-104
3var_A496 Crystal Structure Of Dnpep, Znzn Form Length = 496 1e-104
2ijz_A428 Crystal Structure Of Aminopeptidase Length = 428 3e-70
4eme_A571 X-Ray Crystal Structure And Specificity Of The Plas 7e-37
2glf_A450 Crystal Structure Of Aminipeptidase (m18 Family) Fr 4e-14
1y7e_A458 The Crystal Structure Of Aminopeptidase I From Borr 2e-13
2glj_A461 Crystal Structure Of Aminopeptidase I From Clostrid 7e-11
>pdb|4DYO|A Chain A, Crystal Structure Of Human Aspartyl Aminopeptidase (Dnpep) In Complex With Aspartic Acid Hydroxamate Length = 485 Back     alignment and structure 
Iteration: 1

 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/480 (42%), Positives = 274/480 (57%), Gaps = 33/480 (6%)
Query: 41  RTLHNFSTSGIAQXXXXXXIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWE 100
           R     + +G A+         +LL ++N S +PFHA AE +  L+ AGF  L E ++W 
Sbjct: 8   RGAMQVAMNGKARKEAVQTAAKELLKFVNRSPSPFHAVAECRNRLLQAGFSELKETEKWN 67
Query: 101 LKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDXXXXXXXXXXXXXX------- 153
           +KP   YF TRN S ++AFAVG +Y  GNGF +I AHTD                     
Sbjct: 68  IKPESKYFMTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQVGFQQVG 127
Query: 154 -------------------XGRVIVR-GSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNK 193
                               GRVIV+  + G    +LV V+RP+LR+P LAIHL R +N+
Sbjct: 128 VETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRLEQQLVHVERPILRIPHLAIHLQRNINE 187
Query: 194 DGFKPNLETQLIPLLAXXXXXXXXX-XXXXXXXXXXXXXHHPQLMQILSQELGCGTDDIA 252
           + F PN E  L+P+LA                       HH  LM +L   LG    DI 
Sbjct: 188 N-FGPNTEMHLVPILATAIQEELEKGTPEPGPLNAVDERHHSVLMSLLCAHLGLSPKDIV 246
Query: 253 SIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVA 312
            +EL + DTQP+ LGGA +EFIF+ RLDNL S +C L+ALIDSC  P +L++E  +RMV 
Sbjct: 247 EMELCLADTQPAVLGGAYDEFIFAPRLDNLHSCFCALQALIDSCAGPGSLATEPHVRMVT 306
Query: 313 LFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVH 372
           L+DNEEVGS+S QGA +      +RRI  S  H     T+FE  I +SF++SADMAH VH
Sbjct: 307 LYDNEEVGSESAQGAQSLLTELVLRRISASCQH----PTAFEEAIPKSFMISADMAHAVH 362
Query: 373 PNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFVVRNDMG 432
           PN+ +KHEE+HRP   KG VIK N+ QRYA++ V+  L +E+A    +P Q+ +VRND  
Sbjct: 363 PNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVANKVKVPLQDLMVRNDTP 422
Query: 433 CGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKL 492
           CG+TIGPILAS +G+R +D G  QL+MHS+RE+  T  +      FK F+E F S+ + L
Sbjct: 423 CGTTIGPILASRLGLRVLDLGSPQLAMHSIREMACTTGVLQTLTLFKGFFELFPSLAENL 482
>pdb|3VAR|A Chain A, Crystal Structure Of Dnpep, Znzn Form Length = 496 Back     alignment and structure
>pdb|2IJZ|A Chain A, Crystal Structure Of Aminopeptidase Length = 428 Back     alignment and structure
>pdb|4EME|A Chain A, X-Ray Crystal Structure And Specificity Of The Plasmodium Falciparum Malaria Aminopeptidase Length = 571 Back     alignment and structure
>pdb|2GLF|A Chain A, Crystal Structure Of Aminipeptidase (m18 Family) From Thermotoga Maritima Length = 450 Back     alignment and structure
>pdb|1Y7E|A Chain A, The Crystal Structure Of Aminopeptidase I From Borrelia Burgdorferi B31 Length = 458 Back     alignment and structure
>pdb|2GLJ|A Chain A, Crystal Structure Of Aminopeptidase I From Clostridium Acetobutylicum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query496
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 0.0
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 0.0
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 1e-178
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 1e-176
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 1e-176
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 1e-114
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 6e-47
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1ylo_A348 Hypothetical protein SF2450; structural genomics, 1e-05
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 3e-05
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 4e-05
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 6e-05
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 7e-05
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 7e-05
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 1e-04
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Length = 496 Back     alignment and structure
 Score =  569 bits (1467), Expect = 0.0
 Identities = 216/495 (43%), Positives = 298/495 (60%), Gaps = 33/495 (6%)

Query: 29  HHSFPSSNRYRPRTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDA 88
           HH     +      L+     G A+  +  +   +LL ++N S +PFHA AE +  L+ A
Sbjct: 7   HHHHHDYDIPTTENLYFQGAMGRARKEAVQAAARELLKFVNRSPSPFHAVAECRSRLLQA 66

Query: 89  GFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHIIAAHTDSPCLKLKPK 148
           GF  L E + W++KP   YF TRN S ++AFAVG +Y  GNGF +I AHTDSPCL++K +
Sbjct: 67  GFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRR 126

Query: 149 SASSKS--------------------------GRVIVR-GSDGSFLHKLVKVKRPLLRVP 181
           S  S+                           GRVIV+  + G    +LV V RP+LR+P
Sbjct: 127 SRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRLEQRLVHVDRPILRIP 186

Query: 182 TLAIHLDRTVNKDGFKPNLETQLIPLLAT-KSEETSVEPKEKSSTSSSKVTHHPQLMQIL 240
            LAIHL R VN+  F PN+E  L+P+LAT   EE      E    +++   HH  L  +L
Sbjct: 187 HLAIHLQRNVNE-NFGPNMEMHLVPILATSIQEELEKGTPEPGPLNATDERHHSVLTSLL 245

Query: 241 SQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPS 300
              LG   +DI  +EL + DTQP+ LGGA  EFIF+ RLDNL S +C L+ALIDSC +P+
Sbjct: 246 CAHLGLSPEDILEMELCLADTQPAVLGGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPA 305

Query: 301 NLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQS 360
           +L+++  +RM+AL+DNEEVGS+S QGA +      +RRI  S        T+FE  I +S
Sbjct: 306 SLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQ----HLTAFEEAIPKS 361

Query: 361 FLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNL 420
           +++SADMAH VHPN+ +KHEE+HRP   KG VIK N+ QRYA++ V+  L +E+A    +
Sbjct: 362 YMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGV 421

Query: 421 PTQEFVVRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKA 480
           P Q+ +VRND  CG+TIGPILAS +G+R +D G  QL+MHS+RE   T  +      FK 
Sbjct: 422 PLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKG 481

Query: 481 FYESFSSIDKKLIVD 495
           F+E F S+ + L+VD
Sbjct: 482 FFELFPSLSRSLLVD 496
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Length = 428 Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Length = 461 Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Length = 450 Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Length = 458 Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Length = 571 Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Length = 571 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Length = 348 Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Length = 343 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Length = 353 Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Length = 355 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Length = 373 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Length = 340 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query496
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 100.0
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 100.0
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 100.0
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 100.0
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 100.0
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 100.0
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 100.0
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 100.0
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 100.0
1vho_A346 Endoglucanase; structural genomics, unknown functi 100.0
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 100.0
1ylo_A348 Hypothetical protein SF2450; structural genomics, 100.0
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 100.0
2gre_A349 Deblocking aminopeptidase; structural genomi prote 100.0
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 100.0
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 100.0
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 100.0
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.92
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 99.56
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 99.44
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.13
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.08
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 98.87
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 98.82
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.68
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 98.64
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 98.63
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 98.14
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 98.02
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 97.95
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 97.82
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 97.69
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 97.6
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 97.54
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 97.44
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 97.38
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 96.63
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 96.48
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 96.44
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 96.38
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 96.29
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 95.89
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 95.41
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 95.23
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 95.1
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 94.94
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 94.8
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 94.48
3kas_A 640 Transferrin receptor protein 1; transferrin recept 92.66
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 92.24
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 92.17
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 92.11
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 91.44
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 91.05
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 90.82
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 90.63
2pok_A 481 Peptidase, M20/M25/M40 family; M20 family peptidas 90.48
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 90.12
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 89.92
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 89.13
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 88.83
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 88.34
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 88.08
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 87.42
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 87.26
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 87.08
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 86.6
3khx_A 492 Putative dipeptidase sacol1801; DAPE, metallopepti 86.55
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 86.4
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 85.86
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 85.81
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 85.43
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 84.73
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 84.19
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 84.17
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 84.01
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 83.19
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 82.27
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 81.99
3pfe_A 472 Succinyl-diaminopimelate desuccinylase; metal bind 81.97
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 81.2
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 80.98
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 80.88
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 80.37
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 80.16
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Back     alignment and structure
Probab=100.00  E-value=2.7e-110  Score=889.87  Aligned_cols=436  Identities=48%  Similarity=0.818  Sum_probs=389.6

Q ss_pred             cchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEEeCCcccCCCCeeEE
Q 011000           55 SSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFAVGQKYSVGNGFHII  134 (496)
Q Consensus        55 ~~~~~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~~G~~~~~~~g~~mi  134 (496)
                      ..+.+++++|++||++||||||||++++++|+++||++|.|++.|+++||++||++|++++||||.+|+++.+++|++||
T Consensus        33 ~~~~~~a~~~~~Fl~~spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~iv  112 (496)
T 3vat_A           33 EAVQAAARELLKFVNRSPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLI  112 (496)
T ss_dssp             HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEE
Confidence            34577999999999999999999999999999999999999999999999999999999999999999988778999999


Q ss_pred             EEeccCCceeeeeCCCCCCC--------------------------cEEEEEc-CCCcEEEEEEEcCCCeEEcCCCCccc
Q 011000          135 AAHTDSPCLKLKPKSASSKS--------------------------GRVIVRG-SDGSFLHKLVKVKRPLLRVPTLAIHL  187 (496)
Q Consensus       135 ~AH~Dspgl~VKpi~~~~~~--------------------------G~V~~~~-~~G~~~~~lv~~~~pv~vIp~laiHL  187 (496)
                      |||+|||||+|||+++.+..                          |||++++ .+|+++++||+.++||++||+|||||
T Consensus       113 gaHtDSP~lklKp~p~~~~~g~~~l~ve~YGG~l~~tW~DR~L~laGrV~vk~~~~g~~~~~Lv~~~~Pi~~IP~LaiHl  192 (496)
T 3vat_A          113 GAHTDSPCLRVKRRSRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGRLEQRLVHVDRPILRIPHLAIHL  192 (496)
T ss_dssp             EEECCCCEEEEEEEEEEEETTEEEEEEEEESSCCGGGGTTCCEEEEEEEEEECTTTCCEEEEEEECCSCCBBCCCCCGGG
T ss_pred             EEeccCCCccccCCccccCCCeeEEccEeCCCchhceecCCchhcceEEEEEecCCCeEEEEEEeCCCCeEECCcccccc
Confidence            99999999999999986433                          9999984 46789999999999999999999999


Q ss_pred             ccccccCCCCCCCccceeeeeeccCCcccCC-ccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccc
Q 011000          188 DRTVNKDGFKPNLETQLIPLLATKSEETSVE-PKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCL  266 (496)
Q Consensus       188 ~~~~~~~~~~~n~~~~L~~diG~~~~~~~~~-~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~  266 (496)
                      +|++| +++++|+|++|.|++|....++.++ ..+++..+..+++|+..|++++++++||++||+++|||+++|+||+++
T Consensus       193 ~r~~n-~~~~~n~q~~l~pi~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~la~~~gv~~~Div~~dl~l~d~~~~~~  271 (496)
T 3vat_A          193 QRNVN-ENFGPNMEMHLVPILATSIQEELEKGTPEPGPLNATDERHHSVLTSLLCAHLGLSPEDILEMELCLADTQPAVL  271 (496)
T ss_dssp             STTTT-TCCCCCTTTTTCCEEEEHHHHHHHCC-----------CCSCHHHHHHHHHHHTCCGGGEEEEEEEEEECSCCEE
T ss_pred             Ccchh-cccCcCcccccccEEEeccccccccccccccccccccccccHHHHHHHHHHcCCCcCceEEEEEEEEecCcceE
Confidence            99988 7899999999999999753211000 000001112256889999999999999999999999999999999999


Q ss_pred             cCCCCCeeeccCCCchhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCC
Q 011000          267 GGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHE  346 (496)
Q Consensus       267 ~Gl~~e~I~s~~LDNr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~  346 (496)
                      +|++++||.|+|||||+|||++++||+++.+.+..+.....+.++++||||||||+|++||+|.|+||+|+||+.+.+  
T Consensus       272 ~Gl~~e~I~s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~--  349 (496)
T 3vat_A          272 GGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQ--  349 (496)
T ss_dssp             ETTTTCEEEETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSS--
T ss_pred             eccCCceEEeeccccHHHHHHHHHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhccC--
Confidence            999999999999999999999999999875310000001346779999999999999999999999999999997632  


Q ss_pred             CCChhhHhhhcccceEEEEecCCCCCCCCCccccCCCCCcCCCCcEEEEcCCCCcccCHHHHHHHHHHHHHCCCCEeEEE
Q 011000          347 HVSETSFECTIRQSFLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVIKHNANQRYATSGVTAFLFKEIAKLHNLPTQEFV  426 (496)
Q Consensus       347 ~~~~~~~~~~l~~S~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvIk~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~~  426 (496)
                        +.+.+++++++|++||+||+||.||||+++|+++|.+.||+||+||++++|+|+||+.+.++++++|+++|||||.++
T Consensus       350 --~~~~~~~~l~~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v  427 (496)
T 3vat_A          350 --HLTAFEEAIPKSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLM  427 (496)
T ss_dssp             --CTTHHHHHGGGCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEEC
T ss_pred             --chHHHHHHhhcCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEE
Confidence              678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCCChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhhccccccccccc
Q 011000          427 VRNDMGCGSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYESFSSIDKKLIVD  495 (496)
Q Consensus       427 ~r~D~~gG~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~~~~~~~~~~~~  495 (496)
                      .|+|++||||+|+|++++.||||+|||+|+|||||||||++++|++++++|+++||+++.+++.++.+|
T Consensus       428 ~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~ryMHS~~E~~~~~D~~~~v~Ll~af~~~~~~~~~~~~~~  496 (496)
T 3vat_A          428 VRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSLSRSLLVD  496 (496)
T ss_dssp             CCTTSCCCCCHHHHHHHHHTCEEEEEECEEESTTSSSEEEESHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ecCCCCCcchHHHHHhcccCCcEEEecHhhhccccHHHHhhHHHHHHHHHHHHHHHHhHHHHhhhhcCC
Confidence            999999999999999999999999999999999999999999999999999999999999999887765
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 496
d1y7ea2322 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptida 1e-76
d1y7ea2322 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptida 2e-28
d1y0ya2255 c.56.5.4 (A:164-351,A:6-72) Frv operon protein Frv 7e-31
d1y7ea1133 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA 2e-17
d1yloa2264 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {S 4e-15
d2fvga2255 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 { 4e-10
d1vhoa2248 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase 5e-08
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 9e-08
d1vhea2275 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein Y 5e-07
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 322 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Probable aminopeptidase ApeA
species: Borrelia burgdorferi [TaxId: 139]

 Score =  241 bits (617), Expect = 1e-76
 Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 13/230 (5%)

Query: 260 DTQPSCLGGANNEFIFSGRLDNLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEV 319
               +   G +   I +   D+    +  L ++ D   +P+         +  L D EE+
Sbjct: 99  PAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEETPN------KTAICFLVDKEEI 152

Query: 320 GSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQSFLVSADMAHGVHPNFSEKH 379
           GS    G  +  +   +  ++  +     +    +  +  S  +SAD+   ++P FS  H
Sbjct: 153 GSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWNSKSISADVCAAINPLFSSVH 212

Query: 380 EEHHRPEMQKGLVI-KHNANQRYATS----GVTAFLFKEIAKLHNLPTQEFVV-RNDMGC 433
           +E + P++  G+ I K+  +   + +           +++   +N+  Q   + + + G 
Sbjct: 213 DEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATLGKVEEGG 272

Query: 434 GSTIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYE 483
           G T+   LA   GIRT+D G A +SMHS  EI    D+  AY  +KAFY 
Sbjct: 273 GGTVAKFLAG-YGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYR 321
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 322 Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 255 Back     information, alignment and structure
>d1y7ea1 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 133 Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Length = 264 Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Length = 255 Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 248 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Length = 275 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query496
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 100.0
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 100.0
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.97
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.96
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.95
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.95
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.93
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.82
d1y7ea1133 Probable aminopeptidase ApeA {Borrelia burgdorferi 99.54
d2grea1113 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.26
d1y0ya191 Frv operon protein FrvX {Pyrococcus horikoshii [Ta 98.87
d1vhea190 Hypothetical protein YsdC {Bacillus subtilis [TaxI 98.81
d2fvga184 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 98.6
d1vhoa183 Putative endoglucanase TM1048 {Thermotoga maritima 98.34
d1yloa181 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 98.27
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 97.5
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 97.42
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 97.14
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 97.06
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 96.89
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 96.76
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 95.99
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 95.0
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 94.06
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 93.72
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 92.73
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 92.64
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 92.07
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 90.48
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 89.08
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 88.41
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 87.37
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 85.41
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 85.11
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 81.82
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 81.08
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Probable aminopeptidase ApeA
species: Borrelia burgdorferi [TaxId: 139]

Probab=100.00  E-value=3.7e-84  Score=654.90  Aligned_cols=316  Identities=23%  Similarity=0.312  Sum_probs=259.5

Q ss_pred             CCCCCccccccccccchHHHHHHHHHHHhcCCChHHHHHHHHHHHHHCCCccccccccccccCCCeEEEeecCcEEEEEE
Q 011000           41 RTLHNFSTSGIAQSSSSSSIVGDLLDYLNESWTPFHATAEAKRLLIDAGFELLNENDEWELKPGGGYFFTRNMSCLVAFA  120 (496)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~a~~~~~Fl~~s~T~~h~v~~~~~~L~~~GF~~l~e~~~w~l~~g~k~~~~r~g~~liA~~  120 (496)
                      ++.|+  .++..+...++++|++|++||++||||||+|++++++|+++||++|+|.+.|  ++|++||++|+|++|+||+
T Consensus         1 ~~~w~--~~~~~~~~~~~~~a~~~~~Fl~~~~T~~hav~~~~~~L~~~GF~~l~e~~~~--~~g~k~y~~~~~~sliaf~   76 (322)
T d1y7ea2           1 QNPWI--YLNEEEKNQILNFSESYKKFISKFKTEREVTAYALDKAKKLGFINAEEKKNL--MPGDKIFYTCREKSVAFAI   76 (322)
T ss_dssp             CCGGG--GCCHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTCEESTTCCCC--CTTCEEECBCSSSCBCCEE
T ss_pred             CCccc--cCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeECCCCCcc--cCCCeEEEEeCCCEEEEEE
Confidence            47898  5555566778999999999999999999999999999999999999998887  6899999999999999999


Q ss_pred             eCCcccCCCCeeEEEEeccCCceeeeeCCCCCCCcEEEEEcCCCcEEEEEEEcCCCeEEcCCCCcccccccccCCCCCCC
Q 011000          121 VGQKYSVGNGFHIIAAHTDSPCLKLKPKSASSKSGRVIVRGSDGSFLHKLVKVKRPLLRVPTLAIHLDRTVNKDGFKPNL  200 (496)
Q Consensus       121 ~G~~~~~~~g~~mi~AH~Dspgl~VKpi~~~~~~G~V~~~~~~G~~~~~lv~~~~pv~vIp~laiHL~~~~~~~~~~~n~  200 (496)
                      +|+++ +++|++||+||+||||++                                                        
T Consensus        77 iG~~~-~~~G~~iigaHtDSPr~~--------------------------------------------------------   99 (322)
T d1y7ea2          77 IGKNP-IEDGMNFIVSHTDSPRVP--------------------------------------------------------   99 (322)
T ss_dssp             CCSSC-GGGCCEECCCBCCCCBEE--------------------------------------------------------
T ss_pred             eCCCC-ccCCeEEEEEecCCCchh--------------------------------------------------------
Confidence            99875 367999999999999731                                                        


Q ss_pred             ccceeeeeeccCCcccCCccccCCCCCCccCChhHHHHHHHHHcCCCCCceeEEeeeeeecCCccccCCCCCeeeccCCC
Q 011000          201 ETQLIPLLATKSEETSVEPKEKSSTSSSKVTHHPQLMQILSQELGCGTDDIASIELNICDTQPSCLGGANNEFIFSGRLD  280 (496)
Q Consensus       201 ~~~L~~diG~~~~~~~~~~~~~~~~~~~~~~h~~~ll~~~a~~~gV~~gDiv~~dl~~~d~~~~~~~Gl~~e~I~s~~LD  280 (496)
                                                                                  +++++++|++++||.|+|||
T Consensus       100 ------------------------------------------------------------a~~~~~~G~d~efi~s~rlD  119 (322)
T d1y7ea2         100 ------------------------------------------------------------AGTAKDVGFDKALIGAYGQD  119 (322)
T ss_dssp             ------------------------------------------------------------CSCCEEETTTTCEEEESSHH
T ss_pred             ------------------------------------------------------------hccccccccccceeeccCCc
Confidence                                                                        01245568899999999999


Q ss_pred             chhhHHHHHHHHHHcCCCCCCCCCCCceEEEEEEeccccCcccccccCCCcHHHHHHHHHhhccCCCCChhhHhhhcccc
Q 011000          281 NLASSYCGLRALIDSCVSPSNLSSEHAIRMVALFDNEEVGSDSYQGAGAPTMFQAIRRIVGSLAHEHVSETSFECTIRQS  360 (496)
Q Consensus       281 Nr~~~~~~leal~~~~~~~~~l~~~~~~~~~v~~dqEEVGs~ga~gA~s~~~~d~l~ri~~~~~~~~~~~~~~~~~l~~S  360 (496)
                      ||+|||++|+||+++.+.      ++.+.++++||||||||+|++||+|.|++++|+||+.+++....+...+.+++++|
T Consensus       120 d~~~~~~~l~Ali~~~~~------~~~~~v~~~~D~EEIGS~s~~GA~s~~l~~~l~ri~~~l~~~~~~~~~~~~al~~S  193 (322)
T d1y7ea2         120 DKICVFTSLESIFDLEET------PNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWNS  193 (322)
T ss_dssp             HHHHHHHHHHHHSSSSCC------CSSCEECCCBCSTTC--------CTTHHHHHHHHHHHHHSSTTCCTHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHhhhcC------CCceEEEEEecccccCCCccccccCccHHHHHHHHHHHhcCCCccchhHHHHHhhc
Confidence            999999999999887432      34578889999999999999999999999999999998876555677889999999


Q ss_pred             eEEEEecCCCCCCCCCccccCCCCCcCCCCcEE-EEcCCCCcc----cCHHHHHHHHHHHHHCCCCEeEEEe-ccCCCCC
Q 011000          361 FLVSADMAHGVHPNFSEKHEEHHRPEMQKGLVI-KHNANQRYA----TSGVTAFLFKEIAKLHNLPTQEFVV-RNDMGCG  434 (496)
Q Consensus       361 ~~iS~DvahA~~Pn~~~~~~~~~~~~LG~GpvI-k~~~~~~y~----t~~~~~~~l~~ia~~~~Ip~Q~~~~-r~D~~gG  434 (496)
                      ++||+||+||+||||+++||++|.|.||+||+| |++.+++|.    +++.+.++++++|+++|||||.+++ |+|++||
T Consensus       194 ~~iSaDvahA~hPny~~~~d~~~~~~lg~G~~i~k~~~~~~~~~~~~a~~~~~~~~~~ia~~~~Ip~Q~~~v~r~d~~gG  273 (322)
T d1y7ea2         194 KSISADVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATLGKVEEGGG  273 (322)
T ss_dssp             EEEECCCEECCCC-------CTTSCCTTSCEEEEEEC-----------CHHHHHHHHHHHHHHTCCEEEEEECC-----C
T ss_pred             eeeeccccccccCCCccccccccccccCCCceEEEecCCCccccccccchHHHHHHHHHHHhcCCCeeEEEeccCCCCCc
Confidence            999999999999999999999999999999988 566666554    4789999999999999999999875 9999999


Q ss_pred             CChHHHHhcCCCCcEEEecccccccccHhhhcCHHHHHHHHHHHHHHHhh
Q 011000          435 STIGPILASGVGIRTVDCGIAQLSMHSVREICGTEDIDIAYRHFKAFYES  484 (496)
Q Consensus       435 ~Tig~i~~s~~Gi~tidiGiP~l~MHS~rE~~~~~Dv~~~~~l~~af~~~  484 (496)
                      ||+|+|++ ++||||+|||+|+|||||+||||+++|++++++|+++||+.
T Consensus       274 sTig~i~a-~~Gi~tvdiGiP~l~MHS~rE~~~~~D~~~~~~l~~aF~ee  322 (322)
T d1y7ea2         274 GTVAKFLA-GYGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYRE  322 (322)
T ss_dssp             HHHHHHHH-HHTCEEEEECCEEBSTTSSSEEEEHHHHHHHHHHHHHTTTC
T ss_pred             chHHHHHh-cCCCCEEEcCHHHhhhhHHHHHhchhhHHHHHHHHHHHhcC
Confidence            99999986 49999999999999999999999999999999999999973
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1y7ea1 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d2grea1 b.49.3.1 (A:74-186) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1y0ya1 b.49.3.1 (A:73-163) Frv operon protein FrvX {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1vhea1 b.49.3.1 (A:73-162) Hypothetical protein YsdC {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2fvga1 b.49.3.1 (A:65-148) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhoa1 b.49.3.1 (A:70-152) Putative endoglucanase TM1048 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yloa1 b.49.3.1 (A:67-147) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure