Citrus Sinensis ID: 011023

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-----

MSFLTGFGVLMEKSARTEQVERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELSKKIRSCQLLLSKAAMRGEPITLDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQALEERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQDLASERRNSPRLVDNNLYHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEVQNIEEFSWLNASYAPIVKQLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSHPYVQDCETS

ccccccccEEccccccHHHHHHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHccccccccEEEEEcccccccccccHHHHHHHHccccEEEEEcccccccccccccccccccHHHHHHHHHcccccccccEEEEEccEEEccccHHHHccccccccccccHHHHHHHHHHccccccccHHHHccccccccccccccHHccHHHHHHHcHHHHHHHHHHHcccccccccccccHHHHHccccEEEccccccccccccccccccccccccEEEEccccccccccccccccHHHHHHHHcccccHHHHcccc

ccccccccEEEEcccccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHcccccccccccccccccEEEEEEcccHHHHEEEHHHHHHcccccccEEEEEEEccccHHHHHHHHHHccccccEEEEEEccccccccccccHHHHHHccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcHHccEEEEEcccEEEEEccHHHHcccccccEEccHHcccccHcHHHHccccccHHHHHcccccHHHHHcccEEEcHHHHHHHcHHHHHHHHHHHcccccEEEccccccHEEHEcccccccccccEEEcccccccccHHHHcccEEEEEccccccHHHHcccccccHHHHHcccccHHHHHcccc

MSFLTGFGVLMEKSARTEQVERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELSKKIRSCQLLLSKAAmrgepitldeaepIISSLSSLIFTAQDAHYDIATTIMTMKSHIQALEERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQDLAserrnsprlvdnnlyhfcifsdnvpatsvvvnstitnadhpkqMVFHIVTNGVTYGAMQAWflnndfkgstieVQNIEEFSWLNASYAPIVKQLLNADsraiyfgeyqdlrvepklrnpryLSLLNHLrfyipeiypqlekivfldddvvvqkdltplfsldlhgnvnGAVETCLEAFHRYYKYlnfsnpiisskfdpqacgwafgmNAFDLIAWRKANVTARYHYWQEQNADRTlwklgtlppallafygltepldrrwhvlglgydmnidnrlIESAAVIHFNGNMKPWLKLAISRYkpiwdryvnhshpyvqdcets

msfltgfgvlmeksarteqVERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELSKKIRSCQLLLSKAAMRGEPITLDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQALEERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQdlaserrnsprlvDNNLYHFCIFSDNVPATSVVVNSTitnadhpkqMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEVQNIEEFSWLNASYAPIVKQLLNADSRAIYFGEyqdlrvepklrNPRYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPlfsldlhgnvNGAVETCLEAFHRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHshpyvqdcets

*****GFGVLM********VERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELSKKIRSCQLLLSKAAMRGEPITLDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQALEERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQDLA******PRLVDNNLYHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEVQNIEEFSWLNASYAPIVKQLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSHPYV******

******F************************LSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWEL**KIR**************************SLSSLIFTAQDAHYDIATTIMTMKSHIQA*********VQSTLFGQLLAESLPKSLHCLKVKLSVDWV*******************DNNLYHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEVQNIEEFSWLNASYAPIVKQLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSHPYVQDCET*

**FLTGFGVLMEKSARTEQVERKVL*F*KEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELSKKIRSCQLLLSKAAMRGEPITLDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQALEERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQDLASERRNSPRLVDNNLYHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEVQNIEEFSWLNASYAPIVKQLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSHPYVQDCETS

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		495	2.2.26 [Sep-21-2011]
Q949Q1		537	Probable galacturonosyltr	yes	no	0.983	0.906	0.805	0.0
Q9SKT6		536	Probable galacturonosyltr	no	no	0.943	0.871	0.591	1e-167
Q9LE59		673	Polygalacturonate 4-alpha	no	no	0.898	0.661	0.484	1e-132
Q93ZX7		616	Probable galacturonosyltr	no	no	0.923	0.741	0.473	1e-130
Q0WQD2		680	Probable galacturonosyltr	no	no	0.929	0.676	0.483	1e-129
Q9LSG3		559	Galacturonosyltransferase	no	no	0.804	0.711	0.487	1e-116
Q9ZPZ1		528	Putative galacturonosyltr	no	no	0.888	0.833	0.425	1e-105
Q9FWA4		561	Probable galacturonosyltr	no	no	0.802	0.707	0.467	4e-99
Q9FH36		535	Probable galacturonosyltr	no	no	0.802	0.742	0.387	6e-90
Q0WV13		533	Probable galacturonosyltr	no	no	0.795	0.739	0.384	1e-88

>sp\|Q949Q1\|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1	Back alignment and function desciption

 Score =  843 bits (2178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/489 (80%), Positives = 442/489 (90%), Gaps = 2/489 (0%)

Query: 9   VLMEKSARTEQVERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELS 68
           +L+E+  RTE V    LNFT+E+ SA+SFSRQLAEQ+ LAKAYV IAKEHNN  LAWELS
Sbjct: 49  LLLERDTRTEMVSPPHLNFTEEVTSASSFSRQLAEQMTLAKAYVFIAKEHNNLHLAWELS 108

Query: 69  KKIRSCQLLLSKAAMRGEPITLDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQAL 128
            KIRSCQLLLSKAAMRG+PI+ DEA+PII+ LS+LI+ AQDAHYDIATT+MTMKSHIQAL
Sbjct: 109 SKIRSCQLLLSKAAMRGQPISFDEAKPIITGLSALIYKAQDAHYDIATTMMTMKSHIQAL 168

Query: 129 EERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQDLASERRNSPRLVDNN 188
           EERANAATVQ+T+FGQL+AE+LPKSLHCL +KL+ DWV      +LA E RNSPRLVDNN
Sbjct: 169 EERANAATVQTTIFGQLVAEALPKSLHCLTIKLTSDWVTEPSRHELADENRNSPRLVDNN 228

Query: 189 LYHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIE 248
           LYHFCIFSDNV ATSVVVNST++NADHPKQ+VFHIVTN V+Y AMQAWFL+NDFKGS IE
Sbjct: 229 LYHFCIFSDNVIATSVVVNSTVSNADHPKQLVFHIVTNRVSYKAMQAWFLSNDFKGSAIE 288

Query: 249 VQNIEEFSWLNASYAPIVKQLLNADSRAIYFGEY--QDLRVEPKLRNPRYLSLLNHLRFY 306
           ++++EEFSWLNASY+P+VKQLL+ D+RA YFGE   QD   EPK+RNP+YLSLLNHLRFY
Sbjct: 289 IRSVEEFSWLNASYSPVVKQLLDTDARAYYFGEQTSQDTISEPKVRNPKYLSLLNHLRFY 348

Query: 307 IPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPI 366
           IPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNP+
Sbjct: 349 IPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPL 408

Query: 367 ISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYG 426
           ISSKFDPQACGWAFGMN FDLIAWR ANVTARYHYWQ+QN +RTLWKLGTLPP LL+FYG
Sbjct: 409 ISSKFDPQACGWAFGMNVFDLIAWRNANVTARYHYWQDQNRERTLWKLGTLPPGLLSFYG 468

Query: 427 LTEPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSH 486
           LTEPLDRRWHVLGLGYD+NIDNRLIE+AAVIH+NGNMKPWLKLAI RYKP W +++N SH
Sbjct: 469 LTEPLDRRWHVLGLGYDVNIDNRLIETAAVIHYNGNMKPWLKLAIGRYKPFWLKFLNSSH 528

Query: 487 PYVQDCETS 495
           PY+QDC T+
Sbjct: 529 PYLQDCVTA 537

May be involved in pectin and/or xylans biosynthesis in cell walls (By similarity). Involved in seed mucilage extrusion.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q9SKT6\|GAUTA_ARATH Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana GN=GAUT10 PE=2 SV=2	Back alignment and function description

>sp\|Q9LE59\|GAUT1_ARATH Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1	Back alignment and function description

>sp\|Q93ZX7\|GAUT4_ARATH Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana GN=GAUT4 PE=2 SV=1	Back alignment and function description

>sp\|Q0WQD2\|GAUT3_ARATH Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana GN=GAUT3 PE=2 SV=2	Back alignment and function description

>sp\|Q9LSG3\|GAUT8_ARATH Galacturonosyltransferase 8 OS=Arabidopsis thaliana GN=GAUT8 PE=1 SV=1	Back alignment and function description

>sp\|Q9ZPZ1\|GAUT2_ARATH Putative galacturonosyltransferase 2 OS=Arabidopsis thaliana GN=GAUT2 PE=5 SV=1	Back alignment and function description

>sp\|Q9FWA4\|GAUT9_ARATH Probable galacturonosyltransferase 9 OS=Arabidopsis thaliana GN=GAUT9 PE=2 SV=1	Back alignment and function description

>sp\|Q9FH36\|GAUTC_ARATH Probable galacturonosyltransferase 12 OS=Arabidopsis thaliana GN=GAUT12 PE=2 SV=1	Back alignment and function description

>sp\|Q0WV13\|GAUTD_ARATH Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana GN=GAUT13 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		495
255547123		535	Glycosyltransferase QUASIMODO1, putative	0.981	0.908	0.858	0.0
224124222		531	glycosyltransferase [Populus trichocarpa	0.961	0.896	0.852	0.0
356562646		536	PREDICTED: probable galacturonosyltransf	0.981	0.906	0.827	0.0
356511558		536	PREDICTED: probable galacturonosyltransf	0.981	0.906	0.818	0.0
240254105		537	alpha-1,4-galacturonosyltransferase [Ara	0.983	0.906	0.805	0.0
225456536		535	PREDICTED: probable galacturonosyltransf	0.979	0.906	0.828	0.0
224121430		489	glycosyltransferase [Populus trichocarpa	0.975	0.987	0.817	0.0
449440889		535	PREDICTED: probable galacturonosyltransf	0.981	0.908	0.818	0.0
297844810		538	hypothetical protein ARALYDRAFT_312807 [	0.983	0.905	0.805	0.0
356516881		535	PREDICTED: probable galacturonosyltransf	0.975	0.902	0.805	0.0

>gi\|255547123\|ref\|XP_002514619.1\| Glycosyltransferase QUASIMODO1, putative [Ricinus communis] gi\|223546223\|gb\|EEF47725.1\| Glycosyltransferase QUASIMODO1, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/486 (85%), Positives = 449/486 (92%)

Query: 10  LMEKSARTEQVERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELSK 69
           L E  AR E V R+ LNFTKEILSATSFSRQLAEQI LAKAYVIIAKEHNN  LAWELSK
Sbjct: 50  LQENHARPEPVNREGLNFTKEILSATSFSRQLAEQIALAKAYVIIAKEHNNLHLAWELSK 109

Query: 70  KIRSCQLLLSKAAMRGEPITLDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQALE 129
           +IRSCQLLLSKAAM GEPITL+EAEP+ISSLSSLIF AQDAHYD+ATTIMTMKSHIQALE
Sbjct: 110 QIRSCQLLLSKAAMTGEPITLEEAEPLISSLSSLIFKAQDAHYDVATTIMTMKSHIQALE 169

Query: 130 ERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQDLASERRNSPRLVDNNL 189
           ERANAATVQS +FGQL AE+LPKSLHCL VKL+ DW++   +QDLA E+RNSPRL+DNNL
Sbjct: 170 ERANAATVQSAVFGQLAAEALPKSLHCLIVKLTTDWLKKPLLQDLAEEKRNSPRLMDNNL 229

Query: 190 YHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEV 249
           YH+CIFSDNV ATSVVVNS I+NADHP Q+VFHIVTNGV+YGAMQAWFL++DFKG+TIEV
Sbjct: 230 YHYCIFSDNVLATSVVVNSAISNADHPTQLVFHIVTNGVSYGAMQAWFLSDDFKGATIEV 289

Query: 250 QNIEEFSWLNASYAPIVKQLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIPE 309
           QN++EFSWLNASYAP+VKQLL  DSR+ YF  YQD++VEPKLRNP+YLSLLNHLRFYIPE
Sbjct: 290 QNVKEFSWLNASYAPVVKQLLAEDSRSYYFSGYQDMKVEPKLRNPKYLSLLNHLRFYIPE 349

Query: 310 IYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISS 369
           IYPQLEKIVFLDDDVVVQKDLT LFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISS
Sbjct: 350 IYPQLEKIVFLDDDVVVQKDLTQLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISS 409

Query: 370 KFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGLTE 429
           KFDPQACGWAFGMN FDLIAWRKANVTA+YHYWQEQN DRTLWKLGTLPPALLAFYGLTE
Sbjct: 410 KFDPQACGWAFGMNVFDLIAWRKANVTAQYHYWQEQNVDRTLWKLGTLPPALLAFYGLTE 469

Query: 430 PLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSHPYV 489
           PLDRRWHVLGLGYD NIDNRLIESAAV+HFNGNMKPWLKLAI RYKP+W+RY+N S PY 
Sbjct: 470 PLDRRWHVLGLGYDTNIDNRLIESAAVVHFNGNMKPWLKLAIGRYKPLWERYINQSRPYY 529

Query: 490 QDCETS 495
           QDC TS
Sbjct: 530 QDCVTS 535

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224124222\|ref\|XP_002330135.1\| glycosyltransferase [Populus trichocarpa] gi\|222871269\|gb\|EEF08400.1\| glycosyltransferase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356562646\|ref\|XP_003549580.1\| PREDICTED: probable galacturonosyltransferase 11-like [Glycine max]	Back alignment and taxonomy information

>gi\|356511558\|ref\|XP_003524492.1\| PREDICTED: probable galacturonosyltransferase 11-like [Glycine max]	Back alignment and taxonomy information

>gi\|240254105\|ref\|NP_564057.4\| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi\|75164846\|sp\|Q949Q1.1\|GAUTB_ARATH RecName: Full=Probable galacturonosyltransferase 11 gi\|15293067\|gb\|AAK93644.1\| unknown protein [Arabidopsis thaliana] gi\|17064736\|gb\|AAL32522.1\| Unknown protein [Arabidopsis thaliana] gi\|332191610\|gb\|AEE29731.1\| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|225456536\|ref\|XP_002262858.1\| PREDICTED: probable galacturonosyltransferase 11-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224121430\|ref\|XP_002318580.1\| glycosyltransferase [Populus trichocarpa] gi\|222859253\|gb\|EEE96800.1\| glycosyltransferase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449440889\|ref\|XP_004138216.1\| PREDICTED: probable galacturonosyltransferase 11-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297844810\|ref\|XP_002890286.1\| hypothetical protein ARALYDRAFT_312807 [Arabidopsis lyrata subsp. lyrata] gi\|297336128\|gb\|EFH66545.1\| hypothetical protein ARALYDRAFT_312807 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|356516881\|ref\|XP_003527121.1\| PREDICTED: probable galacturonosyltransferase 11-like isoform 2 [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		495
TAIR\|locus:2027453		537	GAUT11 "galacturonosyltransfer	0.983	0.906	0.805	1.1e-220
TAIR\|locus:2051426		536	GAUT10 "galacturonosyltransfer	0.943	0.871	0.593	5.3e-159
TAIR\|locus:2098836		673	GAUT1 "galacturonosyltransfera	0.898	0.661	0.484	3.6e-121
TAIR\|locus:2160957		616	GAUT4 "galacturonosyltransfera	0.927	0.745	0.471	2e-120
TAIR\|locus:2121753		680	GAUT3 "galacturonosyltransfera	0.923	0.672	0.486	1.1e-119
TAIR\|locus:2090210		559	QUA1 "QUASIMODO 1" [Arabidopsi	0.804	0.711	0.487	1.3e-107
TAIR\|locus:2039934		528	GAUT2 "galacturonosyltransfera	0.638	0.598	0.403	1.5e-104
TAIR\|locus:2074572		561	GAUT9 "galacturonosyltransfera	0.802	0.707	0.465	2e-102
TAIR\|locus:504955915		610	LGT5 "los glycosyltransferase	0.454	0.368	0.473	9.3e-84
TAIR\|locus:2102082		533	GAUT13 "galacturonosyltransfer	0.406	0.377	0.514	3.8e-62

TAIR\|locus:2027453 GAUT11 "galacturonosyltransferase 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2131 (755.2 bits), Expect = 1.1e-220, P = 1.1e-220
 Identities = 394/489 (80%), Positives = 442/489 (90%)

Query:     9 VLMEKSARTEQVERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELS 68
             +L+E+  RTE V    LNFT+E+ SA+SFSRQLAEQ+ LAKAYV IAKEHNN  LAWELS
Sbjct:    49 LLLERDTRTEMVSPPHLNFTEEVTSASSFSRQLAEQMTLAKAYVFIAKEHNNLHLAWELS 108

Query:    69 KKIRSCQLLLSKAAMRGEPITLDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQAL 128
              KIRSCQLLLSKAAMRG+PI+ DEA+PII+ LS+LI+ AQDAHYDIATT+MTMKSHIQAL
Sbjct:   109 SKIRSCQLLLSKAAMRGQPISFDEAKPIITGLSALIYKAQDAHYDIATTMMTMKSHIQAL 168

Query:   129 EERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQDLASERRNSPRLVDNN 188
             EERANAATVQ+T+FGQL+AE+LPKSLHCL +KL+ DWV      +LA E RNSPRLVDNN
Sbjct:   169 EERANAATVQTTIFGQLVAEALPKSLHCLTIKLTSDWVTEPSRHELADENRNSPRLVDNN 228

Query:   189 LYHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIE 248
             LYHFCIFSDNV ATSVVVNST++NADHPKQ+VFHIVTN V+Y AMQAWFL+NDFKGS IE
Sbjct:   229 LYHFCIFSDNVIATSVVVNSTVSNADHPKQLVFHIVTNRVSYKAMQAWFLSNDFKGSAIE 288

Query:   249 VQNIEEFSWLNASYAPIVKQLLNADSRAIYFGEY--QDLRVEPKLRNPRYLSLLNHLRFY 306
             ++++EEFSWLNASY+P+VKQLL+ D+RA YFGE   QD   EPK+RNP+YLSLLNHLRFY
Sbjct:   289 IRSVEEFSWLNASYSPVVKQLLDTDARAYYFGEQTSQDTISEPKVRNPKYLSLLNHLRFY 348

Query:   307 IPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPI 366
             IPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNP+
Sbjct:   349 IPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPL 408

Query:   367 ISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYG 426
             ISSKFDPQACGWAFGMN FDLIAWR ANVTARYHYWQ+QN +RTLWKLGTLPP LL+FYG
Sbjct:   409 ISSKFDPQACGWAFGMNVFDLIAWRNANVTARYHYWQDQNRERTLWKLGTLPPGLLSFYG 468

Query:   427 LTEPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSH 486
             LTEPLDRRWHVLGLGYD+NIDNRLIE+AAVIH+NGNMKPWLKLAI RYKP W +++N SH
Sbjct:   469 LTEPLDRRWHVLGLGYDVNIDNRLIETAAVIHYNGNMKPWLKLAIGRYKPFWLKFLNSSH 528

Query:   487 PYVQDCETS 495
             PY+QDC T+
Sbjct:   529 PYLQDCVTA 537

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS

TAIR\|locus:2051426 GAUT10 "galacturonosyltransferase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2098836 GAUT1 "galacturonosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2160957 GAUT4 "galacturonosyltransferase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121753 GAUT3 "galacturonosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2090210 QUA1 "QUASIMODO 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2039934 GAUT2 "galacturonosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074572 GAUT9 "galacturonosyltransferase 9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504955915 LGT5 "los glycosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2102082 GAUT13 "galacturonosyltransferase 13" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q949Q1	GAUTB_ARATH	2, ., 4, ., 1, ., -	0.8057	0.9838	0.9068	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.01290051	glycosyltransferase (EC-2.4.1.43) (531 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIV.2235.1	hypothetical protein (287 aa)	•	0.899
	gw1.XIII.724.1	pectinesterase family protein (EC-3.1.1.11) (512 aa)	•	0.899
	gw1.X.3259.1	pectinesterase family protein (EC-3.1.1.11) (555 aa)	•	0.899
	gw1.IV.576.1	pectinesterase family protein (EC-3.1.1.11) (315 aa)	•	0.899
	grail3.0035002801	hypothetical protein (431 aa)	•	0.899
	grail3.0033029301	hypothetical protein (435 aa)	•	0.899
	fgenesh4_pm.C_LG_II000883	hypothetical protein (450 aa)	•	0.899
	fgenesh4_pg.C_LG_XIII000035	hypothetical protein (339 aa)	•	0.899
	eugene3.00880019	hypothetical protein (457 aa)	•	0.899
	eugene3.00280097	RecName- Full=Pectinesterase; EC=3.1.1.11; (520 aa)	•	0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		495
PLN02742		534	PLN02742, PLN02742, Probable galacturonosyltransfe	0.0
PLN02829		639	PLN02829, PLN02829, Probable galacturonosyltransfe	1e-177
PLN02910		657	PLN02910, PLN02910, polygalacturonate 4-alpha-gala	1e-176
PLN02523		559	PLN02523, PLN02523, galacturonosyltransferase	1e-161
PLN02718		603	PLN02718, PLN02718, Probable galacturonosyltransfe	1e-133
PLN02870		533	PLN02870, PLN02870, Probable galacturonosyltransfe	1e-120
cd06429		257	cd06429, GT8_like_1, GT8_like_1 represents a subfa	1e-120
PLN02659		534	PLN02659, PLN02659, Probable galacturonosyltransfe	1e-113
PLN02867		535	PLN02867, PLN02867, Probable galacturonosyltransfe	1e-106
PLN02769		629	PLN02769, PLN02769, Probable galacturonosyltransfe	7e-97
pfam01501		248	pfam01501, Glyco_transf_8, Glycosyl transferase fa	7e-63
cd04194		248	cd04194, GT8_A4GalT_like, A4GalT_like proteins cat	9e-16
cd00505		246	cd00505, Glyco_transf_8, Members of glycosyltransf	1e-11
COG1442		325	COG1442, RfaJ, Lipopolysaccharide biosynthesis pro	8e-11

>gnl\|CDD\|215395 PLN02742, PLN02742, Probable galacturonosyltransferase	Back alignment and domain information

 Score =  960 bits (2483), Expect = 0.0
 Identities = 370/487 (75%), Positives = 426/487 (87%), Gaps = 1/487 (0%)

Query: 10  LMEKSARTEQVERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELSK 69
           L E++ R E+V  + LNFT+E+LSATSFSRQLA+QI LAKAYV+IAKEHNN +LAWELS 
Sbjct: 48  LSERNYRKEEVNHEGLNFTEEMLSATSFSRQLADQITLAKAYVVIAKEHNNLQLAWELSA 107

Query: 70  KIRSCQLLLSKAAMRGEPITLDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQALE 129
           +IR+CQLLLSKAA RGEPIT++EAEPII  L++LI+ AQD HYD ATTIMT+K+HIQALE
Sbjct: 108 QIRNCQLLLSKAATRGEPITVEEAEPIIRDLAALIYQAQDLHYDSATTIMTLKAHIQALE 167

Query: 130 ERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSKHIQDLASERRNSPRLVDNNL 189
           ERANAATVQST FGQL AE+LPKSL+CL V+L+ +W ++  +Q  A E+RNSPRLVDNNL
Sbjct: 168 ERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVDNNL 227

Query: 190 YHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEV 249
           YHFC+FSDN+ ATSVVVNST++NA HP Q+VFH+VT+ V YGAMQAWF  NDFKG T+EV
Sbjct: 228 YHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEV 287

Query: 250 QNIEEFSWLNASYAPIVKQLLNADSRAIYFGEYQ-DLRVEPKLRNPRYLSLLNHLRFYIP 308
           Q IEEFSWLNASY P++KQL ++D+++ YF   Q D + E K RNP+YLS+LNHLRFYIP
Sbjct: 288 QKIEEFSWLNASYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIP 347

Query: 309 EIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIIS 368
           EIYP LEK+VFLDDDVVVQKDLTPLFS+DLHGNVNGAVETCLE FHRY+KYLNFS+P+IS
Sbjct: 348 EIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLIS 407

Query: 369 SKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGLT 428
           S FDP ACGWAFGMN FDL+AWRKANVTA YHYWQEQN DRTLWKLGTLPP LL FYGLT
Sbjct: 408 SHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLT 467

Query: 429 EPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSHPY 488
           EPLDRRWHVLGLGYD NID RLIESAAV+HFNGNMKPWLKLAI RYKP+W+RYVN+SHPY
Sbjct: 468 EPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHPY 527

Query: 489 VQDCETS 495
           +Q C   
Sbjct: 528 LQQCNFH 534

Length = 534

>gnl\|CDD\|215443 PLN02829, PLN02829, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215286 PLN02523, PLN02523, galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178320 PLN02718, PLN02718, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215468 PLN02870, PLN02870, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>gnl\|CDD\|215356 PLN02659, PLN02659, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178458 PLN02867, PLN02867, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215412 PLN02769, PLN02769, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8	Back alignment and domain information

>gnl\|CDD\|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>gnl\|CDD\|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>gnl\|CDD\|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		495
PLN02742		534	Probable galacturonosyltransferase	100.0
PLN02829		639	Probable galacturonosyltransferase	100.0
PLN02910		657	polygalacturonate 4-alpha-galacturonosyltransferas	100.0
PLN02769		629	Probable galacturonosyltransferase	100.0
PLN02718		603	Probable galacturonosyltransferase	100.0
PLN02523		559	galacturonosyltransferase	100.0
PLN02870		533	Probable galacturonosyltransferase	100.0
PLN02867		535	Probable galacturonosyltransferase	100.0
PLN02659		534	Probable galacturonosyltransferase	100.0
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	100.0
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	100.0
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	100.0
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	100.0
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	100.0
COG1442		325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	100.0
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	100.0
cd06432		248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	99.98
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	99.98
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	99.93
PLN00176		333	galactinol synthase	99.91
cd06914		278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	99.76
KOG1879		1470	consensus UDP-glucose:glycoprotein glucosyltransfe	99.09
COG5597		368	Alpha-N-acetylglucosamine transferase [Cell envelo	97.95
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	93.96
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	93.52
PF11051		271	Mannosyl_trans3: Mannosyltransferase putative; Int	83.8
KOG1928		409	consensus Alpha-1,4-N-acetylglucosaminyltransferas	83.18
COG4575		104	ElaB Uncharacterized conserved protein [Function u	82.41

>PLN02742 Probable galacturonosyltransferase	Back alignment and domain information

Probab=100.00  E-value=4.3e-140  Score=1107.20  Aligned_cols=486  Identities=76%  Similarity=1.246  Sum_probs=470.8

Q ss_pred             cccccccchhhhcccccccccccChhhHHHHHhHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 011023           10 LMEKSARTEQVERKVLNFTKEILSATSFSRQLAEQIILAKAYVIIAKEHNNHRLAWELSKKIRSCQLLLSKAAMRGEPIT   89 (495)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~y~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   89 (495)
                      +.+++++.+++..+|+|||+|++++|+++|+|||||||||||++|||++||++|+|||++||||+||+||+|++|+++++
T Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dql~~Ak~y~~ia~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~~~~  127 (534)
T PLN02742         48 LSERNYRKEEVNHEGLNFTEEMLSATSFSRQLADQITLAKAYVVIAKEHNNLQLAWELSAQIRNCQLLLSKAATRGEPIT  127 (534)
T ss_pred             CccccccccccccccccchhhhcChHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence            45677888999999999999999999999999999999999999999999999999999999999999999999999977


Q ss_pred             CCchHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhhccccCccccchhhHhHHHHHhCc
Q 011023           90 LDEAEPIISSLSSLIFTAQDAHYDIATTIMTMKSHIQALEERANAATVQSTLFGQLLAESLPKSLHCLKVKLSVDWVRSK  169 (495)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~  169 (495)
                      +++++++|++|+++|++||+++|||+++++|||||++++||++++|++|++|++||||+|+|||||||+||||+|||+++
T Consensus       128 ~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~  207 (534)
T PLN02742        128 VEEAEPIIRDLAALIYQAQDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNP  207 (534)
T ss_pred             chhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchHhHHHHHhCc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccccccCCCCCccCCCceeEEEEeCCCcchhhhHhHhhhcCCCCCcEEEEEEeCCCChHHHHHhhhhcCCCCceEEE
Q 011023          170 HIQDLASERRNSPRLVDNNLYHFCIFSDNVPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEV  249 (495)
Q Consensus       170 ~~~~~~~~~~~~~~l~d~~~~hia~~sDnvlaasVvI~S~v~ns~~p~~~~FhIvtd~is~~~m~~wf~~~~~~~a~i~v  249 (495)
                      +++++.++++++++|+||+++|||+|||||+|++||||||+.|+++|+++|||||||++++.+|++||.+|++++++|+|
T Consensus       208 ~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V  287 (534)
T PLN02742        208 KLQRKAEEKRNSPRLVDNNLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEV  287 (534)
T ss_pred             hhhhccccccccccccCCCcceEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEE
Confidence            99877777789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeccccccccccchhHHHhhhcccccceeccccccc-ccCCCCCCCCCcchhhhHHhhhcccccCCCeEEEEecCeeecc
Q 011023          250 QNIEEFSWLNASYAPIVKQLLNADSRAIYFGEYQDL-RVEPKLRNPRYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQK  328 (495)
Q Consensus       250 ~~i~~f~wl~~~y~pvl~~l~~~~~~~~~f~~~~~~-~~~l~~r~~~~~S~~~y~Rf~lPellP~ldKVLYLD~DvVV~~  328 (495)
                      +++++|+|++.+|+||++|+++++++.+||+..... ..+.++|+|+|+|+++|+||+||++||+++||||||+|+||++
T Consensus       288 ~n~e~f~wl~~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~  367 (534)
T PLN02742        288 QKIEEFSWLNASYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQK  367 (534)
T ss_pred             EEeccccccccccchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecC
Confidence            999999999999999999999999999999876632 3677899999999999999999999999999999999999999


Q ss_pred             CChhhhcCCCCCCeeeeecchhhhhhhhhhcccCCCcccccCCCCCCcceeeceeeeehhHHHHHhHHHHHHHHHHHcCC
Q 011023          329 DLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNAD  408 (495)
Q Consensus       329 DLseLw~iDL~g~viaAV~d~~~~~~r~~~~ln~s~p~i~~~f~~~~~yfNsGV~linL~~wR~~~it~~~~~~~~~n~d  408 (495)
                      ||++||++||+|+++|||+||...++++..|+||++|.++.+|+++.||||+|||||||++||++++|+.++.|++.+.+
T Consensus       368 DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~  447 (534)
T PLN02742        368 DLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVD  447 (534)
T ss_pred             ChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccc
Confidence            99999999999999999999998899999999999999999999999999999999999999999999999999999988


Q ss_pred             ccccccCCCcHHHhhhcCCeeeccCcceeeccCCCCccCccccCCCeEEEccCCCCCCccCccCCCHHHHHHHHhcCCCc
Q 011023          409 RTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGYDMNIDNRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSHPY  488 (495)
Q Consensus       409 ~~l~~~gdq~~~nl~F~~~i~~L~~~WN~~~lgy~~~v~~~~i~~a~IIHf~G~~KPW~~~~~~~y~~~W~~Y~~~t~pf  488 (495)
                      ..+|++|++|+++++|+|++.+||.+||+.++||+++++...+++|+||||+|++|||.+.++++|+++|++|+++++||
T Consensus       448 ~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~yr~~W~kYl~~s~~f  527 (534)
T PLN02742        448 RTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHPY  527 (534)
T ss_pred             cccccccccchHHHHHcCcceecChhheecccccccccchhhccCCeEEEECCCCCcccccCCcccchHHHHHHccCCHH
Confidence            89999999999999999999999999999999999888888999999999999999999999999999999999999999


Q ss_pred             hhcccCC
Q 011023          489 VQDCETS  495 (495)
Q Consensus       489 ~~~c~~~  495 (495)
                      +++||||
T Consensus       528 l~~Cni~  534 (534)
T PLN02742        528 LQQCNFH  534 (534)
T ss_pred             HHhCCCC
Confidence            9999997

>PLN02829 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>PLN02769 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02718 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02523 galacturonosyltransferase	Back alignment and domain information

>PLN02870 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02867 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02659 Probable galacturonosyltransferase	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>PLN00176 galactinol synthase	Back alignment and domain information

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family	Back alignment and domain information

>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose	Back alignment and domain information

>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG4575 ElaB Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		495
1ss9_A		311	Crystal Structural Analysis Of Active Site Mutant Q		5e-04

>pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311

Back alignment and structure

Iteration: 1

Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 26/189 (13%) Query: 293 NPRYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEA 352 N R++S+ + R + E +K+++LD DV+V+ LTPL+ DL N GA C++ Sbjct: 75 NIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGA---CIDL 131 Query: 353 FHRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLW 412 F + + ++ A G+ +L WR+ ++ W EQ D + Sbjct: 132 FVERQEGYKQKIGMADGEYYFNA-----GVLLINLKKWRRHDIFKMSCEWVEQYKDVMQY 186 Query: 413 KLGTLPPALLAFYGLTEPLDRRWHVLGLGYDMNIDNRL---------------IESAAVI 457 + + L F G + R++ + Y + NR + AV Sbjct: 187 QDEDILNGL--FKGGVCYANSRFNFMPTNYAF-MANRFASRHTDPLYRDRTNTVMPVAVS 243 Query: 458 HFNGNMKPW 466 H+ G KPW Sbjct: 244 HYCGPAKPW 252

PyMOL of 1ss9

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		495
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	9e-61
3tzt_A		276	Glycosyl transferase family 8; structural genomics	8e-24
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	9e-05

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311	Back alignment and structure

 Score =  200 bits (511), Expect = 9e-61
 Identities = 52/315 (16%), Positives = 100/315 (31%), Gaps = 59/315 (18%)

Query: 191 HFCIFSDN--VPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIE 248
                +D+       V   S         ++ FH++  G++     A   N    G  I 
Sbjct: 2   DIVFAADDNYAAYLCVAAKSVEAAH-PDTEIRFHVLDAGISEANRAAVAANLRGGGGNIR 60

Query: 249 VQNIEEFSWLNASYAPIVKQLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIP 308
             ++    +                                   N R++S+  + R  + 
Sbjct: 61  FIDVNPEDFAGFPL------------------------------NIRHISITTYARLKLG 90

Query: 309 EIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAV-ETCLEAFHRYYKYLNFSNPII 367
           E     +K+++LD DV+V+  LTPL+  DL  N  GA  +  +E    Y + +  ++   
Sbjct: 91  EYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADG-- 148

Query: 368 SSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGL 427
                     +  G+   +L  WR+ ++      W EQ  D   ++   +   L  F G 
Sbjct: 149 -------EYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGL--FKGG 199

Query: 428 TEPLDRRWHVLGLGYDMNID--------------NRLIESAAVIHFNGNMKPWLKLAISR 473
               + R++ +   Y    +                 +   AV H+ G  KPW +   + 
Sbjct: 200 VCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAW 259

Query: 474 YKPIWDRYVNHSHPY 488
               +          
Sbjct: 260 GAERFTELAGSLTTV 274

PyMOL of 1g9r

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Length = 263	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		495
3tzt_A		276	Glycosyl transferase family 8; structural genomics	100.0
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	100.0
1ll2_A		333	Glycogenin-1; protein-substrate complex, beta-alph	99.93
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	99.9

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0	Back alignment and structure

Probab=100.00  E-value=1.5e-46  Score=376.00  Aligned_cols=258  Identities=17%  Similarity=0.206  Sum_probs=191.5

Q ss_pred             ceeEEEEeCC--CcchhhhHhHhhhcCCCCCcEEEEEEeCCCChHHHHHhhhhcCCCCceEEEEeccccccccccchhHH
Q 011023          189 LYHFCIFSDN--VPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEVQNIEEFSWLNASYAPIV  266 (495)
Q Consensus       189 ~~hia~~sDn--vlaasVvI~S~v~ns~~p~~~~FhIvtd~is~~~m~~wf~~~~~~~a~i~v~~i~~f~wl~~~y~pvl  266 (495)
                      .+|||+++|+  +.+++|+|+|++.|+++ ++++|||++++++.+.++.+.......+..|+++.+++ ++         
T Consensus         5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~-~~---------   73 (276)
T 3tzt_A            5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATD-DL---------   73 (276)
T ss_dssp             CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC-------------
T ss_pred             eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCH-HH---------
Confidence            4899999996  67999999999999986 57999999999998877665554444567788776643 10         


Q ss_pred             HhhhcccccceecccccccccCCCCCCCCCcchhhhHHhhhcccccC-CCeEEEEecCeeeccCChhhhcCCCCCCeeee
Q 011023          267 KQLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIPEIYPQ-LEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGA  345 (495)
Q Consensus       267 ~~l~~~~~~~~~f~~~~~~~~~l~~r~~~~~S~~~y~Rf~lPellP~-ldKVLYLD~DvVV~~DLseLw~iDL~g~viaA  345 (495)
                                  |.       ..+  ..+++|..+|+||++|+++|+ ++||||||+|+||++||++||++|++|+++||
T Consensus        74 ------------~~-------~~~--~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aa  132 (276)
T 3tzt_A           74 ------------FS-------FAK--VTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAA  132 (276)
T ss_dssp             -------------------------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEE
T ss_pred             ------------Hh-------cCc--cccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEE
Confidence                        00       001  125788999999999999995 99999999999999999999999999999999


Q ss_pred             ecchhhhhhhhhhcccCCCcccccCCCCCCcceeeceeeeehhHHHHHhHHHHHHHHHHHcCCccccccCCCcHHHhhhc
Q 011023          346 VETCLEAFHRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFY  425 (495)
Q Consensus       346 V~d~~~~~~r~~~~ln~s~p~i~~~f~~~~~yfNsGV~linL~~wR~~~it~~~~~~~~~n~d~~l~~~gdq~~~nl~F~  425 (495)
                      |+||....  ...+.+      ..+++...||||||||||||++||+.++++++++|++.+....  ..+||+++|++|+
T Consensus       133 v~d~~~~~--~~~~~~------~~~l~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~~--~~~DQd~LN~~f~  202 (276)
T 3tzt_A          133 ASHTGKTD--MANNVN------RIRLGTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMNL--LLPDQDILNAMYG  202 (276)
T ss_dssp             EEC----------------------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHG
T ss_pred             EEecccch--HHHHHH------HhcCCCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccccc--cCCChhHHHHHHh
Confidence            99997431  111111      1234444699999999999999999999999999998776443  3489999999999


Q ss_pred             CCeeeccC-cceeeccCCCCc--c---C----ccccCCCeEEEccCCCCCCccCccCCCHHHHHHHHhcCCCch
Q 011023          426 GLTEPLDR-RWHVLGLGYDMN--I---D----NRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHSHPYV  489 (495)
Q Consensus       426 ~~i~~L~~-~WN~~~lgy~~~--v---~----~~~i~~a~IIHf~G~~KPW~~~~~~~y~~~W~~Y~~~t~pf~  489 (495)
                      |++++||. +||++.. |...  .   +    .+.+++|+||||+|+.|||...+.++|+++||+|++..++++
T Consensus       203 ~~~~~Lp~~~wN~~~~-~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~~~w~~Y~~~~~~~~  275 (276)
T 3tzt_A          203 DRIYPLDDLIYNYDAR-NYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHRNKFTSLYKHYMSLTKRYL  275 (276)
T ss_dssp             GGEEEEEHHHHSEETT-CHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCCSTTHHHHHHHHHHHHHHT
T ss_pred             CCEEECCchheeeecc-cchhhhccccchhhhhhhccCCeEEEECCCCCCcCCCCCCchHHHHHHHHHHHHHhh
Confidence            99999998 9999973 3211  0   1    124578999999999999999999999999999999877665

PyMOL of 3tzt

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*	Back alignment and structure

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		495
d1ga8a_		282	c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri	6e-32
d1ll2a_		263	c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun	4e-07

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  121 bits (305), Expect = 6e-32
 Identities = 54/305 (17%), Positives = 101/305 (33%), Gaps = 58/305 (19%)

Query: 195 FSDN-VPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEVQNIE 253
             DN      V   S +  A    ++ FH++  G++     A   N    G  I   ++ 
Sbjct: 7   ADDNYAAYLCVAAKS-VEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVN 65

Query: 254 EFSWLNASYAPIVKQLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIPEIYPQ 313
              +                                   N R++S+  + R  + E    
Sbjct: 66  PEDFAGFPL------------------------------NIRHISITTYARLKLGEYIAD 95

Query: 314 LEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAV-ETCLEAFHRYYKYLNFSNPIISSKFD 372
            +K+++LD DV+V+  LTPL+  DL  N  GA  +  +E    Y + +  ++        
Sbjct: 96  CDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADG------- 148

Query: 373 PQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYGLTEPLD 432
                +  G+   +L  WR+ ++      W EQ  D   ++   +   L  F G     +
Sbjct: 149 --EYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGL--FKGGVCYAN 204

Query: 433 RRWHVLGLGYDMNID--------------NRLIESAAVIHFNGNMKPWLKLAISRYKPIW 478
            R++ +   Y    +                 +   AV H+ G  KPW +   +     +
Sbjct: 205 SRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERF 264

Query: 479 DRYVN 483
                
Sbjct: 265 TELAG 269

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		495
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	100.0
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	99.92
d1o7qa_		287	alpha-1,3-galactosyltransferase catalytic domain {	90.78
d1lzia_		283	Glycosyltransferase A catalytic domain {Human (Hom	87.58

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=1.2e-42  Score=343.41  Aligned_cols=254  Identities=20%  Similarity=0.275  Sum_probs=203.5

Q ss_pred             eeEEEEeCC--CcchhhhHhHhhhcCCCCCcEEEEEEeCCCChHHHHHhhhhcCCCCceEEEEeccccccccccchhHHH
Q 011023          190 YHFCIFSDN--VPATSVVVNSTITNADHPKQMVFHIVTNGVTYGAMQAWFLNNDFKGSTIEVQNIEEFSWLNASYAPIVK  267 (495)
Q Consensus       190 ~hia~~sDn--vlaasVvI~S~v~ns~~p~~~~FhIvtd~is~~~m~~wf~~~~~~~a~i~v~~i~~f~wl~~~y~pvl~  267 (495)
                      +|||+++|+  +.+++|+|+|++.|+++ ..++|||++++++.+..+.+.......+..+.++.+++-+           
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~-----------   68 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPED-----------   68 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGG-----------
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchH-----------
Confidence            689999995  67999999999998775 5799999999999998877655544456677776654311           


Q ss_pred             hhhcccccceecccccccccCCCCCCCCCcchhhhHHhhhcccccCCCeEEEEecCeeeccCChhhhcCCCCCCeeeeec
Q 011023          268 QLLNADSRAIYFGEYQDLRVEPKLRNPRYLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLDLHGNVNGAVE  347 (495)
Q Consensus       268 ~l~~~~~~~~~f~~~~~~~~~l~~r~~~~~S~~~y~Rf~lPellP~ldKVLYLD~DvVV~~DLseLw~iDL~g~viaAV~  347 (495)
                                 |.       ..+. ..+++|.++|+||++|++||+++||||||+||||++||++||++|++++.+||+.
T Consensus        69 -----------~~-------~~~~-~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~  129 (282)
T d1ga8a_          69 -----------FA-------GFPL-NIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASI  129 (282)
T ss_dssp             -----------GT-------TSCC-CCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEE
T ss_pred             -----------hc-------cccc-cccccCHHHHHHHHHhhhCCccceEEEecCCEEEecchHHHHhcccccceeeeeh
Confidence                       00       0011 1367899999999999999999999999999999999999999999999999999


Q ss_pred             chhhhh-hhhhhcccCCCcccccCCCCCCcceeeceeeeehhHHHHHhHHHHHHHHHHHcCCccccccCCCcHHHhhhcC
Q 011023          348 TCLEAF-HRYYKYLNFSNPIISSKFDPQACGWAFGMNAFDLIAWRKANVTARYHYWQEQNADRTLWKLGTLPPALLAFYG  426 (495)
Q Consensus       348 d~~~~~-~r~~~~ln~s~p~i~~~f~~~~~yfNsGV~linL~~wR~~~it~~~~~~~~~n~d~~l~~~gdq~~~nl~F~~  426 (495)
                      |+.... ..+...+         ++.++.+||||||||+|+++||+.++++++.++++++.....  .+||+++|.+|.|
T Consensus       130 d~~~~~~~~~~~~~---------~~~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~~~~--~~DQd~LN~~f~~  198 (282)
T d1ga8a_         130 DLFVERQEGYKQKI---------GMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQ--YQDQDILNGLFKG  198 (282)
T ss_dssp             CHHHHTSTTHHHHT---------TCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCS--STHHHHHHHHHTT
T ss_pred             hhhhhhhhhhHHHh---------CCCCCCceeecceeeechhhhhhhhHHHHHHHHHHhcccCcc--cCchhHHHHHhcC
Confidence            976421 1122222         244568999999999999999999999999999987654433  4789999999999


Q ss_pred             CeeeccCcceeeccCCCCccC--------------ccccCCCeEEEccCCCCCCccCccCCCHHHHHHHHhcC
Q 011023          427 LTEPLDRRWHVLGLGYDMNID--------------NRLIESAAVIHFNGNMKPWLKLAISRYKPIWDRYVNHS  485 (495)
Q Consensus       427 ~i~~L~~~WN~~~lgy~~~v~--------------~~~i~~a~IIHf~G~~KPW~~~~~~~y~~~W~~Y~~~t  485 (495)
                      ++..||.+||++..+|.....              .+...+++||||+|+.|||...+.+++++.|++|....
T Consensus       199 ~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~~~~~~~~~~~~~~  271 (282)
T d1ga8a_         199 GVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSL  271 (282)
T ss_dssp             SEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCSTTTHHHHHHHTTC
T ss_pred             CEEeCCHHHeeccccccccccccccccchhhhhhhhhccCCCEEEeeCCCCCCCCCCCCChhHHHHHHHHHhh
Confidence            999999999998654321110              13467899999999999999999889999999998764

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure