Citrus Sinensis ID: 011042

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-----
MAFSQTTLLLKQVLLLHLLCSIITTSTSAASDTHFQILNVNESIKGSRTDHAKMSQYNELFERHNNISSSNTSSDEARWNLELVHRDKMSSSSNTTNNMHYHRHQHSFHARMQRDVKRVATLVRRLSGGGADAAKHEVQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQGMFVGAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC
ccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccccccccccccHHHHHHHcccccccccccccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEcccccccEEEEEccccccccccccEEEEcccccccHHHHHcccccccEEEEccccccccccEEEEcccccccccEEEccccccccccEEEEEEEEEEEccEEEccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEccccEEEEccccEEEEEccccEEEEEEEccccccEEEEEEEEEEEEEEEEccccEEEEEcccc
cccHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccHHcccccccccccHHcccHccccccccccccccccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEEccccccEEEEEEcccccEEEEcccccHHHccccccccccccccccEcccccHHHHHcccccccccccEEEEEEccccccEEEEEEEEEEEccEEEccEEEEEcccccccccccccEEEcccccccEHHHcccccccEEEEEEcccccccccEEEEccccccccccccccccccccccEEEEEEEEEEEccEEEEccHHHEEcccccccEEEEEcccEEEEccHHHHHHHHHHHHHHHccccccccccccccEEEcccccEEEccEEEEEEEccEEEccccccEEEEEccccEEEEEEccccccEEEEEEEEEccEEEEEEccccEEEEccccc
MAFSQTTLLLKQVLLLHLLCSIittstsaasdtHFQILNVNesikgsrtdhaKMSQYNELFErhnnisssntssdeARWNLELvhrdkmssssnttnnmhyhrhqHSFHARMQRDVKRVATLVRRLsgggadaakhevqdfgtdvvsgmdqgsgeYFVRigvgspprsqymvidsgsdivwvqcqpcsqcykqsdpvfdpadsasfsgvscsSAVCDRlenagchagrcryevsygdgsytkgtLALETLTIGRTVVKNVAigcghknqgmfVGAAGllglgggsmslvgqlggqtggaFSYCLvsrgtgssgslvfgrealpvgaawvplvrnprapsfyyvglsglgvggmripisedlfrltqmgddgvvmdtgtavtrlptpayEAFRDAFVAqtgnlprasgvsifdtcynlsgfvsvrvptvsfyfsggpvltlpasnflipvddagtfcfafapspsglsiIGNIQqegiqisfdgangfvgfgpnvc
MAFSQTTLLLKQVLLLHLLCSIITTstsaasdthfQILNVNESIKGSRTDHAKMSQYNELFERHNnisssntssdeaRWNLELVHRDKMSSSSNTTNNMHYHRHQHSFHARMQRDVKRVATLVRRLSgggadaakhevqdfgTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQGMFVGAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC
MAFSQTTlllkqvlllhllcsiittstsaasdthFQILNVNESIKGSRTDHAKMSQYNELFERHNNISSSNTSSDEARWNLELVHRDKMssssnttnnMHYHRHQHSFHARMQRDVKRVATLVRRLSGGGADAAKHEVQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADsasfsgvscssavcDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQgmfvgaagllglgggsmslvgqlggqTGGAFSYCLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFyyvglsglgvggMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSiigniqqegiqiSFDGANGFVGFGPNVC
*****TTLLLKQVLLLHLLCSIITTSTSAASDTHFQILNVN**************************************************************************VKRVATLVRRL***********VQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQGMFVGAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSIIGNIQQEGIQISFDGANGFVGFG****
****QTTLLLKQVLLLHLLCSIITTSTSAASDTHFQILNV*******************************************VHRDK***********************M*R**********************************MDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFD***********CS***CD*********GRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQGMFVGAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRG**SSGSLVFGREALPVGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVA**********VSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC
MAFSQTTLLLKQVLLLHLLCSIITTSTSAASDTHFQILNVNESIKGSRTDHAKMSQYNELFERHNNI********EARWNLELVHRDKMSSSSNTTNNMHYHRHQHSFHARMQRDVKRVATLVRRLSGGGADAAKHEVQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQGMFVGAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC
*AFSQTTLLLKQVLLLHLLCSIIT*******DTHFQILNVNESIKG*******************************RWNLELVHRDKMSSSSNTTNNMHYHRHQHSFHARMQRDVKRVATLVRRLSGG***********FGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQGMFVGAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAFSQTTLLLKQVLLLHLLCSIITTSTSAASDTHFQILNVNESIKGSRTDHAKMSQYNELFERHNNISSSNTSSDEARWNLELVHRDKMSSSSNTTNNMHYHRHQHSFHARMQRDVKRVATLVRRLSGGGADAAKHEVQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQGMFVGAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query495 2.2.26 [Sep-21-2011]
Q9LHE3470 Protein ASPARTIC PROTEASE yes no 0.852 0.897 0.750 1e-180
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.971 0.962 0.441 1e-110
Q766C3437 Aspartic proteinase nepen N/A no 0.783 0.887 0.356 2e-67
Q766C2438 Aspartic proteinase nepen N/A no 0.674 0.762 0.415 1e-65
Q6XBF8437 Aspartic proteinase CDR1 no no 0.789 0.894 0.341 1e-56
Q3EBM5447 Probable aspartic proteas no no 0.779 0.863 0.284 2e-41
Q9LZL3453 Aspartic proteinase PCS1 no no 0.640 0.699 0.306 4e-27
Q9S9K4475 Aspartic proteinase-like no no 0.656 0.684 0.244 5e-24
Q9LX20528 Aspartic proteinase-like no no 0.775 0.727 0.253 2e-15
Q0IU52410 Aspartic proteinase Asp1 no no 0.442 0.534 0.262 5e-15
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function desciption
 Score =  630 bits (1625), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 325/433 (75%), Positives = 372/433 (85%), Gaps = 11/433 (2%)

Query: 65  NNISSSNTSSDEARWNLELVHRDKMSSSSNTTNNMHYHRHQHSFHARMQRDVKRVATLVR 124
           NN   S+ SS  +++ L L+HRD+  S       + Y  H H  HARM+RD  RV+ ++R
Sbjct: 47  NNTHFSDESS--SKYTLRLLHRDRFPS-------VTYRNHHHRLHARMRRDTDRVSAILR 97

Query: 125 RLSGG--GADAAKHEVQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWV 182
           R+SG    +  +++EV DFG+D+VSGMDQGSGEYFVRIGVGSPPR QYMVIDSGSD+VWV
Sbjct: 98  RISGKVIPSSDSRYEVNDFGSDIVSGMDQGSGEYFVRIGVGSPPRDQYMVIDSGSDMVWV 157

Query: 183 QCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTK 242
           QCQPC  CYKQSDPVFDPA S S++GVSC S+VCDR+EN+GCH+G CRYEV YGDGSYTK
Sbjct: 158 QCQPCKLCYKQSDPVFDPAKSGSYTGVSCGSSVCDRIENSGCHSGGCRYEVMYGDGSYTK 217

Query: 243 GTLALETLTIGRTVVKNVAIGCGHKNQGMFVGAAGLLGLGGGSMSLVGQLGGQTGGAFSY 302
           GTLALETLT  +TVV+NVA+GCGH+N+GMF+GAAGLLG+GGGSMS VGQL GQTGGAF Y
Sbjct: 218 GTLALETLTFAKTVVRNVAMGCGHRNRGMFIGAAGLLGIGGGSMSFVGQLSGQTGGAFGY 277

Query: 303 CLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLF 362
           CLVSRGT S+GSLVFGREALPVGA+WVPLVRNPRAPSFYYVGL GLGVGG+RIP+ + +F
Sbjct: 278 CLVSRGTDSTGSLVFGREALPVGASWVPLVRNPRAPSFYYVGLKGLGVGGVRIPLPDGVF 337

Query: 363 RLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVS 422
            LT+ GD GVVMDTGTAVTRLPT AY AFRD F +QT NLPRASGVSIFDTCY+LSGFVS
Sbjct: 338 DLTETGDGGVVMDTGTAVTRLPTAAYVAFRDGFKSQTANLPRASGVSIFDTCYDLSGFVS 397

Query: 423 VRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSIIGNIQQEGIQISFD 482
           VRVPTVSFYF+ GPVLTLPA NFL+PVDD+GT+CFAFA SP+GLSIIGNIQQEGIQ+SFD
Sbjct: 398 VRVPTVSFYFTEGPVLTLPARNFLMPVDDSGTYCFAFAASPTGLSIIGNIQQEGIQVSFD 457

Query: 483 GANGFVGFGPNVC 495
           GANGFVGFGPNVC
Sbjct: 458 GANGFVGFGPNVC 470
Aspartic protease that may be involved in drought avoidance through abscisic acid signaling.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query495
255544139481 Aspartic proteinase nepenthesin-1 precur 0.898 0.925 0.766 0.0
225463766479 PREDICTED: aspartic proteinase nepenthes 0.884 0.914 0.761 0.0
356575389473 PREDICTED: aspartic proteinase nepenthes 0.907 0.949 0.729 0.0
449458736482 PREDICTED: protein ASPARTIC PROTEASE IN 0.915 0.939 0.710 0.0
297742733521 unnamed protein product [Vitis vinifera] 0.787 0.748 0.772 0.0
356536463475 PREDICTED: aspartic proteinase nepenthes 0.911 0.949 0.730 0.0
224093400382 predicted protein [Populus trichocarpa] 0.771 1.0 0.822 1e-180
224080963382 predicted protein [Populus trichocarpa] 0.771 1.0 0.820 1e-179
297834938471 pepsin A [Arabidopsis lyrata subsp. lyra 0.864 0.908 0.740 1e-178
79407941470 aspartyl protease family protein [Arabid 0.852 0.897 0.750 1e-178
>gi|255544139|ref|XP_002513132.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223548143|gb|EEF49635.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/462 (76%), Positives = 400/462 (86%), Gaps = 17/462 (3%)

Query: 34  HFQILNVNESIKGSRTDHAKMSQYNELFERHNNISSSNTSSDEARWNLELVHRDKMSSSS 93
           HFQ+LNV E+I        K SQY ELF+  N+  +      E +W L+LVHRDK+    
Sbjct: 37  HFQLLNVKEAIT-----ETKASQYQELFDNQNDTLT------EGKWKLKLVHRDKI---- 81

Query: 94  NTTNNMHYHRHQHSFHARMQRDVKRVATLVRRLSGGGADAAKHEVQDFGTDVVSGMDQGS 153
            T  N   + H H+FHAR+QRD KRVATL+RRLS   A ++ + V++FG +VVSGM+QGS
Sbjct: 82  -TAFNKSSYDHSHNFHARIQRDKKRVATLIRRLSPRDATSS-YSVEEFGAEVVSGMNQGS 139

Query: 154 GEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSS 213
           GEYF+RIGVGSPPR QY+VIDSGSDIVWVQCQPC+QCY Q+DPVFDPADSASF GV CSS
Sbjct: 140 GEYFIRIGVGSPPREQYVVIDSGSDIVWVQCQPCTQCYHQTDPVFDPADSASFMGVPCSS 199

Query: 214 AVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCGHKNQGMFV 273
           +VC+R+ENAGCHAG CRYEV YGDGSYTKGTLALETLT GRTVV+NVAIGCGH+N+GMFV
Sbjct: 200 SVCERIENAGCHAGGCRYEVMYGDGSYTKGTLALETLTFGRTVVRNVAIGCGHRNRGMFV 259

Query: 274 GAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGREALPVGAAWVPLVR 333
           GAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGT S+GSL FGR A+PVGAAW+PL+R
Sbjct: 260 GAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTDSAGSLEFGRGAMPVGAAWIPLIR 319

Query: 334 NPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRD 393
           NPRAPSFYY+ LSG+GVGGM++PISED+F+L +MG+ GVVMDTGTAVTR+PT AY AFRD
Sbjct: 320 NPRAPSFYYIRLSGVGVGGMKVPISEDVFQLNEMGNGGVVMDTGTAVTRIPTVAYVAFRD 379

Query: 394 AFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAG 453
           AF+ QTGNLPRASGVSIFDTCYNL+GFVSVRVPTVSFYF+GGP+LTLPA NFLIPVDD G
Sbjct: 380 AFIGQTGNLPRASGVSIFDTCYNLNGFVSVRVPTVSFYFAGGPILTLPARNFLIPVDDVG 439

Query: 454 TFCFAFAPSPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC 495
           TFCFAFA SPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC
Sbjct: 440 TFCFAFAASPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC 481

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225463766|ref|XP_002267930.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356575389|ref|XP_003555824.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|449458736|ref|XP_004147103.1| PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Cucumis sativus] gi|449518669|ref|XP_004166359.1| PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297742733|emb|CBI35367.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356536463|ref|XP_003536757.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|224093400|ref|XP_002309912.1| predicted protein [Populus trichocarpa] gi|222852815|gb|EEE90362.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224080963|ref|XP_002306246.1| predicted protein [Populus trichocarpa] gi|222855695|gb|EEE93242.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297834938|ref|XP_002885351.1| pepsin A [Arabidopsis lyrata subsp. lyrata] gi|297331191|gb|EFH61610.1| pepsin A [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|79407941|ref|NP_188636.2| aspartyl protease family protein [Arabidopsis thaliana] gi|75273243|sp|Q9LHE3.1|ASPG2_ARATH RecName: Full=Protein ASPARTIC PROTEASE IN GUARD CELL 2; Short=AtASPG2; Flags: Precursor gi|11994777|dbj|BAB03167.1| nucleoid chloroplast DNA-binding protein-like [Arabidopsis thaliana] gi|28392860|gb|AAO41867.1| unknown protein [Arabidopsis thaliana] gi|332642798|gb|AEE76319.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query495
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.852 0.897 0.625 1.1e-142
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.773 0.766 0.405 6.8e-79
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.882 0.904 0.380 1.4e-78
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.779 0.795 0.432 1.8e-78
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.781 0.801 0.400 9.6e-73
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.763 0.797 0.325 1.1e-48
TAIR|locus:2183715464 AT5G10760 [Arabidopsis thalian 0.755 0.806 0.300 2.6e-47
TAIR|locus:2017799484 AT1G79720 [Arabidopsis thalian 0.672 0.688 0.300 4.5e-43
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.682 0.773 0.296 1.8e-39
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.765 0.822 0.271 4.3e-38
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
 Identities = 271/433 (62%), Positives = 311/433 (71%)

Query:    65 NNISSSNTSSDEARWNLELVHRDKMXXXXXXXXXMHYHRHQHSFHARMQRDVKRVATLVR 124
             NN   S+ SS  +++ L L+HRD+            Y  H H  HARM+RD  RV+ ++R
Sbjct:    47 NNTHFSDESS--SKYTLRLLHRDRFPSVT-------YRNHHHRLHARMRRDTDRVSAILR 97

Query:   125 RLSGG--GADAAKHEVQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWV 182
             R+SG    +  +++EV DFG+D+VSGMDQGSGEYFVRIGVGSPPR QYMVIDSGSD+VWV
Sbjct:    98 RISGKVIPSSDSRYEVNDFGSDIVSGMDQGSGEYFVRIGVGSPPRDQYMVIDSGSDMVWV 157

Query:   183 QCQPCSQCYKQSDPVFDPADXXXXXXXXXXXXXXDRLENAGCHAGRCRYEVSYGDGSYTK 242
             QCQPC  CYKQSDPVFDPA               DR+EN+GCH+G CRYEV YGDGSYTK
Sbjct:   158 QCQPCKLCYKQSDPVFDPAKSGSYTGVSCGSSVCDRIENSGCHSGGCRYEVMYGDGSYTK 217

Query:   243 GTLALETLTIGRTVVKNVAIGCGHKNQXXXXXXXXXXXXXXXXXXXXXXXXXXTGGAFSY 302
             GTLALETLT  +TVV+NVA+GCGH+N+                          TGGAF Y
Sbjct:   218 GTLALETLTFAKTVVRNVAMGCGHRNRGMFIGAAGLLGIGGGSMSFVGQLSGQTGGAFGY 277

Query:   303 CLVSRGTGSSGSLVFGREALPVGAAWVPLVRNPRAPSFXXXXXXXXXXXXMRIPISEDLF 362
             CLVSRGT S+GSLVFGREALPVGA+WVPLVRNPRAPSF            +RIP+ + +F
Sbjct:   278 CLVSRGTDSTGSLVFGREALPVGASWVPLVRNPRAPSFYYVGLKGLGVGGVRIPLPDGVF 337

Query:   363 RLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVS 422
              LT+ GD GVVMDTGTAVTRLPT AY AFRD F +QT NLPRASGVSIFDTCY+LSGFVS
Sbjct:   338 DLTETGDGGVVMDTGTAVTRLPTAAYVAFRDGFKSQTANLPRASGVSIFDTCYDLSGFVS 397

Query:   423 VRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPSGLSXXXXXXXXXXXXSFD 482
             VRVPTVSFYF+ GPVLTLPA NFL+PVDD+GT+CFAFA SP+GLS            SFD
Sbjct:   398 VRVPTVSFYFTEGPVLTLPARNFLMPVDDSGTYCFAFAASPTGLSIIGNIQQEGIQVSFD 457

Query:   483 GANGFVGFGPNVC 495
             GANGFVGFGPNVC
Sbjct:   458 GANGFVGFGPNVC 470
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183715 AT5G10760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017799 AT1G79720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LHE3ASPG2_ARATH3, ., 4, ., 2, 3, ., -0.75050.85250.8978yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00002585001
SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (407 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-148
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-85
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 2e-79
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 6e-49
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 6e-28
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 2e-26
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 5e-22
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 2e-21
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 5e-14
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 7e-14
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 4e-12
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 3e-09
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 1e-08
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-07
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 9e-07
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 2e-06
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 2e-05
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 3e-05
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 8e-05
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 2e-04
cd05487326 cd05487, renin_like, Renin stimulates production o 0.002
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information 
 Score =  425 bits (1094), Expect = e-148
 Identities = 167/345 (48%), Positives = 205/345 (59%), Gaps = 50/345 (14%)

Query: 155 EYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSA 214
           EY V +G+G+P R Q +++D+GSD+ WVQCQPC                           
Sbjct: 1   EYVVTVGLGTPARDQTVIVDTGSDLTWVQCQPC--------------------------- 33

Query: 215 VCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRT-VVKNVAIGCGHKNQGMFV 273
                         C Y+VSYGDGSYT G LA +TLT+G + VV   A GCGH N+G+F 
Sbjct: 34  --------------CLYQVSYGDGSYTTGDLATDTLTLGSSDVVPGFAFGCGHDNEGLFG 79

Query: 274 GAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGREAL-PVGAAWVPLV 332
           GAAGLLGLG G +SL  Q     GG FSYCL  R + SSG L FG  A  P GA++ P++
Sbjct: 80  GAAGLLGLGRGKLSLPSQTASSYGGVFSYCLPDRSSSSSGYLSFGAAASVPAGASFTPML 139

Query: 333 RNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFR 392
            NPR P+FYYVGL+G+ VGG R+PI    F     G  GV++D+GT +TRLP  AY A R
Sbjct: 140 SNPRVPTFYYVGLTGISVGGRRLPIPPASF-----GAGGVIIDSGTVITRLPPSAYAALR 194

Query: 393 DAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDA 452
           DAF A     PRA G SI DTCY+LSGF SV VPTVS +F GG  + L AS  L PVDD+
Sbjct: 195 DAFRAAMAAYPRAPGFSILDTCYDLSGFRSVSVPTVSLHFQGGADVELDASGVLYPVDDS 254

Query: 453 GTFCFAFAP--SPSGLSIIGNIQQEGIQISFDGANGFVGFGPNVC 495
              C AFA      GLSIIGN+QQ+  ++ +D A G +GF P  C
Sbjct: 255 SQVCLAFAGTSDDGGLSIIGNVQQQTFRVVYDVAGGRIGFAPGGC 299

Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 299
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 495
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 100.0
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.96
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.91
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.11
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.78
PF1365090 Asp_protease_2: Aspartyl protease 96.5
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.54
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.23
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 92.74
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 91.29
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 90.92
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 89.92
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 89.31
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 87.97
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 86.32
COG3577215 Predicted aspartyl protease [General function pred 82.66
PF1365090 Asp_protease_2: Aspartyl protease 81.79
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 80.51
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1e-74  Score=606.09  Aligned_cols=394  Identities=34%  Similarity=0.708  Sum_probs=331.8

Q ss_pred             CceEEEEecCCCCCCCCCCCCCCCCCCCchhHHHHHHhhHHhHHHHHHHhcCCCCCCCccccccceeeeecccCCCcceE
Q 011042           77 ARWNLELVHRDKMSSSSNTTNNMHYHRHQHSFHARMQRDVKRVATLVRRLSGGGADAAKHEVQDFGTDVVSGMDQGSGEY  156 (495)
Q Consensus        77 ~~~~l~l~hr~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~R~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~Y  156 (495)
                      ++++++|+||+++|+|.+++    ..+..++++++++|+.+|++++.++..             ...|+..+...++++|
T Consensus        23 ~~~~~~l~h~~~~~sp~~~~----~~~~~~~~~~~~~~~~~r~~~~~~~~~-------------~~~~~~~~~~~~~~~Y   85 (431)
T PLN03146         23 GGFTVDLIHRDSPKSPFYNP----SETPSQRLRNAFRRSISRVNHFRPTDA-------------SPNDPQSDLISNGGEY   85 (431)
T ss_pred             CceEEEEEeCCCCCCCCCCC----CCChhHHHHHHHHHHHHHHHHHhhccc-------------cCCccccCcccCCccE
Confidence            47999999999999986442    345678899999999999988864421             1134555555677899


Q ss_pred             EEEEeeCCCCceeeEEEecCCCceeEecCCCCCcccCCCCccCCCCCCccccccCCChhcccccCC-CCCC-CCceeeee
Q 011042          157 FVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENA-GCHA-GRCRYEVS  234 (495)
Q Consensus       157 ~~~i~iGTP~q~~~l~~DTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~~~~C~~~~~~-~C~~-~~~~~~~~  234 (495)
                      +++|+||||||++.|+|||||+++||+|.+|..|+.|.++.|||++|+||+.++|.++.|..+... .|.. +.|.|.+.
T Consensus        86 ~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~i~  165 (431)
T PLN03146         86 LMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYS  165 (431)
T ss_pred             EEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeEEE
Confidence            999999999999999999999999999999999999999999999999999999999999887654 3754 56999999


Q ss_pred             eCCCCeEEEEEEEEEEEECC-----EEeeeeEEEEEEecCCCC-CCcceEEeeCCCCCCccccccCccCCeEEEEeecCC
Q 011042          235 YGDGSYTKGTLALETLTIGR-----TVVKNVAIGCGHKNQGMF-VGAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRG  308 (495)
Q Consensus       235 YgdGs~~~G~~~~Dtvt~g~-----~~~~~~~fG~~~~~~g~f-~~~~GIlGLg~~~~s~~~ql~~~~~~~FS~cL~~~~  308 (495)
                      |+||+.+.|++++|+|+|++     ..++++.|||++.+.+.| ...+||||||++++|+++|+.....++|||||.+..
T Consensus       166 Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~~~  245 (431)
T PLN03146        166 YGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPLS  245 (431)
T ss_pred             eCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCCcEEEECCCCC
Confidence            99999889999999999976     468999999999988877 468999999999999999998655679999998643


Q ss_pred             C--CCcceEEecccC-CC-CCceEEecccCCCCCeEEEEEeeeeEecCeeeccccccccccccCCCcEEEccCCceeeec
Q 011042          309 T--GSSGSLVFGREA-LP-VGAAWVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLP  384 (495)
Q Consensus       309 ~--~~~G~L~fGg~~-~~-~~~~~tpl~~~~~~~~~y~v~l~gisvgg~~l~i~~~~~~~~~~g~~~~iiDSGTt~t~lp  384 (495)
                      +  ...|.|+||+.. +. +.+.||||+.+. .+.+|+|.|++|+||++.++++...|.  ..+.+++||||||++|+||
T Consensus       246 ~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~-~~~~y~V~L~gIsVgg~~l~~~~~~~~--~~~~g~~iiDSGTt~t~Lp  322 (431)
T PLN03146        246 SDSNGTSKINFGTNAIVSGSGVVSTPLVSKD-PDTFYYLTLEAISVGSKKLPYTGSSKN--GVEEGNIIIDSGTTLTLLP  322 (431)
T ss_pred             CCCCCcceEEeCCccccCCCCceEcccccCC-CCCeEEEeEEEEEECCEECcCCccccc--cCCCCcEEEeCCccceecC
Confidence            2  247999999865 33 458999998542 367999999999999999998877664  3456789999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCCcccccccccccCcccccccEEEEEEeCCCEEEeCCCCeEEEecCCCceEEEEEecCC
Q 011042          385 TPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPSPS  464 (495)
Q Consensus       385 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~~Cl~~~~~~~  464 (495)
                      +++|++|+++|.+.+...+.......+++||+...  ...+|+|+|+|+ |++++|++++|+++.. .+..|+++.+.. 
T Consensus       323 ~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~--~~~~P~i~~~F~-Ga~~~l~~~~~~~~~~-~~~~Cl~~~~~~-  397 (431)
T PLN03146        323 SDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTS--DIKLPIITAHFT-GADVKLQPLNTFVKVS-EDLVCFAMIPTS-  397 (431)
T ss_pred             HHHHHHHHHHHHHHhccccCCCCCCCCCccccCCC--CCCCCeEEEEEC-CCeeecCcceeEEEcC-CCcEEEEEecCC-
Confidence            99999999999998853332233334669998532  257899999998 8999999999999876 467899998753 


Q ss_pred             CceeecHhhhcceEEEEECCCCEEEEeeCCC
Q 011042          465 GLSIIGNIQQEGIQISFDGANGFVGFGPNVC  495 (495)
Q Consensus       465 ~~~IlG~~fl~~~yvvfD~~~~~IGFa~~~C  495 (495)
                      +.||||+.|||++||+||++++|||||+.+|
T Consensus       398 ~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C  428 (431)
T PLN03146        398 SIAIFGNLAQMNFLVGYDLESKTVSFKPTDC  428 (431)
T ss_pred             CceEECeeeEeeEEEEEECCCCEEeeecCCc
Confidence            4699999999999999999999999999999

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
1qdm_A478 Crystal Structure Of Prophytepsin, A Zymogen Of A B 2e-04
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 3e-04
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 3e-04
3d91_A341 Human Renin In Complex With Remikiren Length = 341 7e-04
2bks_A340 Crystal Structure Of Renin-Pf00074777 Complex Lengt 7e-04
3vcm_A335 Crystal Structure Of Human Prorenin Length = 335 7e-04
1hrn_A337 High Resolution Crystal Structures Of Recombinant H 7e-04
2i4q_A336 Human ReninPF02342674 COMPLEX Length = 336 7e-04
3oad_A166 Design And Optimization Of New Piperidines As Renin 7e-04
2x0b_A383 Crystal Structure Of Human Angiotensinogen Complexe 8e-04
2g24_A333 Ketopiperazine-Based Renin Inhibitors: Optimization 8e-04
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 Back     alignment and structure 
Iteration: 1

 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 110 ARMQRDVKRVATLVRRLSGG-------GADAAKHEVQDFGTDVVSGMDQGSGEYFVRIGV 162
           A  +R + R + +   LSGG       GA+  + E +    D+V+  +  + +YF  IGV
Sbjct: 4   ALKKRPIDRNSRVATGLSGGEEQPLLSGANPLRSEEEG---DIVALKNYMNAQYFGEIGV 60
Query: 163 GSPPRSQYMVIDSGSDIVWVQCQPCSQCY 191
           G+PP+   ++ D+GS  +WV   P ++CY
Sbjct: 61  GTPPQKFTVIFDTGSSNLWV---PSAKCY 86
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 Back     alignment and structure
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 Back     alignment and structure
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 Back     alignment and structure
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 Back     alignment and structure
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 Back     alignment and structure
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin Inhibitors Length = 166 Back     alignment and structure
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 Back     alignment and structure
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-98
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 3e-87
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-84
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 1e-29
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 2e-28
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 2e-26
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-25
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-25
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 7e-24
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 2e-23
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 5e-23
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 1e-21
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 1e-21
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 3e-21
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-20
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-20
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-20
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 2e-20
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-19
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 6e-19
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 7e-19
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 1e-18
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-18
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 3e-18
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 4e-18
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-18
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 8e-18
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 4e-17
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-16
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 3e-16
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 4e-14
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 9e-14
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 5e-08
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 3e-05
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  302 bits (773), Expect = 1e-98
 Identities = 70/375 (18%), Positives = 120/375 (32%), Gaps = 33/375 (8%)

Query: 150 DQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGV 209
           D  +G ++  +   +P     +++D   + +WV C+          P       +  +  
Sbjct: 17  DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTH 76

Query: 210 SCSSAVCDRLENAGCHAGRCR-YEVSYGDGSYTKGTLALETLTIGRT-----------VV 257
            C S  C      GCH   C     +        G L  + L I  T            V
Sbjct: 77  QCLS--CPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTV 134

Query: 258 KNVAIGCGHK---NQGMFVGAAGLLGLGGGSMSLVGQLGGQTG--GAFSYCLVSRGTGSS 312
                 C       +G+     G+ GLG   +SL  QL    G    F+ CL    T   
Sbjct: 135 PQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSK- 193

Query: 313 GSLVFGREALPVGAAWVPLVR--------NPRAPSFYYVGLSGLGVGGMRI-PISEDLFR 363
           G+++FG     +       +                Y V ++ + +    + P+++    
Sbjct: 194 GAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISST 253

Query: 364 LTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSIFDTCYNLSGFVSV 423
           +      G ++ T T    L    Y+AF   F  Q     +   V+ F  C+N +   + 
Sbjct: 254 IVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAY 313

Query: 424 RVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPS---PSGLSIIGNIQQEGIQIS 480
               +      GPV  +   + ++     G  C         P     +G  Q E   + 
Sbjct: 314 PSVDLVMDKPNGPVWRISGEDLMVQAQP-GVTCLGVMNGGMQPRAEITLGARQLEENLVV 372

Query: 481 FDGANGFVGFGPNVC 495
           FD A   VGF  +  
Sbjct: 373 FDLARSRVGFSTSSL 387
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query495
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.88
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.62
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.25
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.15
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 91.22
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 85.19
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 80.6
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=4.7e-64  Score=523.32  Aligned_cols=340  Identities=23%  Similarity=0.456  Sum_probs=288.8

Q ss_pred             ccccceeeeecccCCCcceEEEEEeeCCCCceeeEEEecCCCceeEecCCCCCcccCCCCccCCCCCCccccccCCChhc
Q 011042          137 EVQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGVSCSSAVC  216 (495)
Q Consensus       137 ~~~~~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~l~~DTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~~~~C  216 (495)
                      .++.+..|++.+  ..+++|+++|.||||||++.|+|||||+++||+|.+|             .+|+||+.++|.++.|
T Consensus         5 ~~~~~~~pv~~d--~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C   69 (413)
T 3vla_A            5 RPSALVVPVKKD--ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQC   69 (413)
T ss_dssp             CCSEEEEEEEEC--TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHH
T ss_pred             CCccEEEEeeec--CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccc
Confidence            355788999886  4789999999999999999999999999999999875             3799999999999999


Q ss_pred             ccccCC-----------CCCCCCceeeeeeC-CCCeEEEEEEEEEEEEC---------CEEeeeeEEEEEEec--CCCCC
Q 011042          217 DRLENA-----------GCHAGRCRYEVSYG-DGSYTKGTLALETLTIG---------RTVVKNVAIGCGHKN--QGMFV  273 (495)
Q Consensus       217 ~~~~~~-----------~C~~~~~~~~~~Yg-dGs~~~G~~~~Dtvt~g---------~~~~~~~~fG~~~~~--~g~f~  273 (495)
                      ......           .|.++.|.|.+.|+ ||+.+.|++++|+|+|+         +..++++.|||++..  .+.+.
T Consensus        70 ~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~  149 (413)
T 3vla_A           70 SLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLAS  149 (413)
T ss_dssp             HHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCT
T ss_pred             cccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccc
Confidence            876533           35556799999994 88888999999999996         257899999999986  45557


Q ss_pred             CcceEEeeCCCCCCccccccCc--cCCeEEEEeecCCCCCcceEEecccC--------CCCC-ceEEecccCCCC-----
Q 011042          274 GAAGLLGLGGGSMSLVGQLGGQ--TGGAFSYCLVSRGTGSSGSLVFGREA--------LPVG-AAWVPLVRNPRA-----  337 (495)
Q Consensus       274 ~~~GIlGLg~~~~s~~~ql~~~--~~~~FS~cL~~~~~~~~G~L~fGg~~--------~~~~-~~~tpl~~~~~~-----  337 (495)
                      .++||||||++++|+++|+...  .+++|||||.+... ..|.|+||+.+        +.++ ++||||+.++..     
T Consensus       150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~-~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~  228 (413)
T 3vla_A          150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTS-SNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATS  228 (413)
T ss_dssp             TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSS-SCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSC
T ss_pred             ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCC-CceEEEECCCcccccccccccCCceeEeecccCCccccccc
Confidence            8999999999999999998752  26999999998533 37999999976        2567 999999876432     


Q ss_pred             -----CeEEEEEeeeeEecCeeeccccccccccccCCCcEEEccCCceeeecHHHHHHHHHHHHHhhC--CCCCCCCccc
Q 011042          338 -----PSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTG--NLPRASGVSI  410 (495)
Q Consensus       338 -----~~~y~v~l~gisvgg~~l~i~~~~~~~~~~g~~~~iiDSGTt~t~lp~~~~~~l~~~~~~~~~--~~~~~~~~~~  410 (495)
                           ..||+|+|++|+||++.+.++++.|.++++|++++||||||++|+||+++|++|+++|.+++.  +++...+...
T Consensus       229 ~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~  308 (413)
T 3vla_A          229 TQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAP  308 (413)
T ss_dssp             CTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTT
T ss_pred             cccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCC
Confidence                 279999999999999999999888887777788999999999999999999999999999874  4444444444


Q ss_pred             ccccccccCccc----ccccEEEEEEeC-CCEEEeCCCCeEEEecCCCceEEEEEecCC---CceeecHhhhcceEEEEE
Q 011042          411 FDTCYNLSGFVS----VRVPTVSFYFSG-GPVLTLPASNFLIPVDDAGTFCFAFAPSPS---GLSIIGNIQQEGIQISFD  482 (495)
Q Consensus       411 ~~~C~~~~~~~~----~~~P~i~f~f~g-g~~~~l~~~~y~~~~~~~~~~Cl~~~~~~~---~~~IlG~~fl~~~yvvfD  482 (495)
                      ++.||+.++...    ..+|+|+|+|+| +++|+|++++|+++.. .+..|++|+..+.   +.||||+.|||++|+|||
T Consensus       309 ~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD  387 (413)
T 3vla_A          309 FGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN-DNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFD  387 (413)
T ss_dssp             CSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE-TTEEEECEEEEESSCSSSEEECHHHHTTEEEEEE
T ss_pred             CcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC-CCcEEEEEEecCCCcccceeEehhhhcCeEEEEE
Confidence            679999865432    479999999985 4999999999999876 4678999887632   579999999999999999


Q ss_pred             CCCCEEEEeeC
Q 011042          483 GANGFVGFGPN  493 (495)
Q Consensus       483 ~~~~~IGFa~~  493 (495)
                      ++++|||||++
T Consensus       388 ~~~~riGfa~~  398 (413)
T 3vla_A          388 LATSRVGFSGT  398 (413)
T ss_dssp             TTTTEEEEEEE
T ss_pred             CCCCEEEEEEe
Confidence            99999999985
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 495
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 3e-54
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 4e-40
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-39
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 4e-38
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 6e-38
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 6e-37
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 7e-37
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 1e-36
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 4e-36
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 4e-36
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 4e-36
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-35
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 5e-35
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 5e-34
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 9e-34
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 1e-33
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 5e-33
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 5e-33
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 6e-33
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 4e-30
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 2e-28
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 1e-26
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  184 bits (468), Expect = 3e-54
 Identities = 71/375 (18%), Positives = 115/375 (30%), Gaps = 49/375 (13%)

Query: 150 DQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQPCSQCYKQSDPVFDPADSASFSGV 209
           D  +  Y +    G+      +V+D    +VW  C       +          + ++   
Sbjct: 10  DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAP 64

Query: 210 SCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRT--------VVKNVA 261
            C +  C    +         Y  +   G+   G+L+        T        V   V 
Sbjct: 65  GCPAPSC---GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVL 121

Query: 262 IGCGHKNQGMFV--GAAGLLGLGGGSMSLVGQLGGQTGGAFSYCLVSRGTGSSGSLVFGR 319
             C        +  G+ G+ GL    ++L  Q+      A  + L     G   ++  G 
Sbjct: 122 AACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGG 181

Query: 320 EALPVGAA----WVPLVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMD 375
                       + PLV    +P  +Y+    + VG  R+P+ E       +   GV++ 
Sbjct: 182 PVPWPQFTQSMPYTPLVTKGGSP-AHYISARSIVVGDTRVPVPE-----GALATGGVMLS 235

Query: 376 TGTAVTRLPTPAYEAFRDAFVAQTGN--------LPRASGVSIFDTCYNLSG----FVSV 423
           T      L    Y    DAF                    V+ F  CY+           
Sbjct: 236 TRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGY 295

Query: 424 RVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCFAFAPS--------PSGLSIIGNIQQE 475
            VP V     GG   T+   N ++ V   GT C AF            +   I+G  Q E
Sbjct: 296 AVPNVQLGLDGGSDWTMTGKNSMVDVKQ-GTACVAFVEMKGVAAGDGRAPAVILGGAQME 354

Query: 476 GIQISFDGANGFVGF 490
              + FD     +GF
Sbjct: 355 DFVLDFDMEKKRLGF 369
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query495
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=8.6e-56  Score=453.01  Aligned_cols=338  Identities=25%  Similarity=0.416  Sum_probs=268.3

Q ss_pred             hHHHHHHhhHHhHHHHHHHhcCCC-CCCCccccccceeeeecccCCCcceEEEEEeeCCCCceeeEEEecCCCceeEecC
Q 011042          107 SFHARMQRDVKRVATLVRRLSGGG-ADAAKHEVQDFGTDVVSGMDQGSGEYFVRIGVGSPPRSQYMVIDSGSDIVWVQCQ  185 (495)
Q Consensus       107 ~~~~~~~~d~~R~~~l~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~l~~DTGS~~~Wv~~~  185 (495)
                      .+++.+.++..+.++++.+...-. .............|+.+   +.+.+|+++|.||||||++.|+|||||+++||+|.
T Consensus        11 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n---~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~   87 (370)
T d3psga_          11 SLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLEN---YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV   87 (370)
T ss_dssp             CHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT
T ss_pred             cHHHHHHHcCcHHHHHHhcccchhhhhcccccCccccccccc---ccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECc
Confidence            466777777766666654421100 00011122233456655   56789999999999999999999999999999999


Q ss_pred             CCCCcccCCCCccCCCCCCccccccCCChhcccccCCCCCCCCceeeeeeCCCCeEEEEEEEEEEEECCEEeeeeEEEEE
Q 011042          186 PCSQCYKQSDPVFDPADSASFSGVSCSSAVCDRLENAGCHAGRCRYEVSYGDGSYTKGTLALETLTIGRTVVKNVAIGCG  265 (495)
Q Consensus       186 ~C~~C~~~~~~~fdps~SsT~~~~~C~~~~C~~~~~~~C~~~~~~~~~~YgdGs~~~G~~~~Dtvt~g~~~~~~~~fG~~  265 (495)
                      +|..|.++.++.|||++|+||+..                  .|.|.+.|++|+. .|.+++|++.+++.+++++.|||+
T Consensus        88 ~C~~~~~~~~~~yd~~~Sst~~~~------------------~~~~~~~Yg~Gs~-~G~~~~d~~~~~~~~~~~~~f~~~  148 (370)
T d3psga_          88 YCSSLACSDHNQFNPDDSSTFEAT------------------SQELSITYGTGSM-TGILGYDTVQVGGISDTNQIFGLS  148 (370)
T ss_dssp             TCCSGGGTTSCCBCGGGCTTCEEE------------------EEEEEEESSSCEE-EEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             cCCCcccccccccCCCcccccccC------------------CCcEEEEeCCceE-EEEEEEEEEeeeceeeeeeEEEEE
Confidence            999999999999999999999986                  5899999999986 899999999999999999999999


Q ss_pred             EecCCCC---CCcceEEeeCCCCCCccc------cc---cCccCCeEEEEeecCCCCCcceEEecccC---CCCCceEEe
Q 011042          266 HKNQGMF---VGAAGLLGLGGGSMSLVG------QL---GGQTGGAFSYCLVSRGTGSSGSLVFGREA---LPVGAAWVP  330 (495)
Q Consensus       266 ~~~~g~f---~~~~GIlGLg~~~~s~~~------ql---~~~~~~~FS~cL~~~~~~~~G~L~fGg~~---~~~~~~~tp  330 (495)
                      +...+.+   ...+||+|||++..+...      ++   ..+..+.||+|+.+.... .|.|+||+.+   +.+++.|+|
T Consensus       149 ~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~-~g~l~~Gg~d~~~~~~~l~~~p  227 (370)
T d3psga_         149 ETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDS-GSVVLLGGIDSSYYTGSLNWVP  227 (370)
T ss_dssp             CSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC------CEEEEETCCCGGGBSSCCEEEE
T ss_pred             eeccCceecccccccccccccCcccccCCCchhhhhhhhcccccceeEEEeecCCCC-CceEecCCcCchhcccceeEEe
Confidence            9887654   568999999987654322      22   236789999999876544 7999999987   788999999


Q ss_pred             cccCCCCCeEEEEEeeeeEecCeeeccccccccccccCCCcEEEccCCceeeecHHHHHHHHHHHHHhhCCCCCCCCccc
Q 011042          331 LVRNPRAPSFYYVGLSGLGVGGMRIPISEDLFRLTQMGDDGVVMDTGTAVTRLPTPAYEAFRDAFVAQTGNLPRASGVSI  410 (495)
Q Consensus       331 l~~~~~~~~~y~v~l~gisvgg~~l~i~~~~~~~~~~g~~~~iiDSGTt~t~lp~~~~~~l~~~~~~~~~~~~~~~~~~~  410 (495)
                      +.    ...+|.|.++++.|+|+.+...         ++..+||||||++++||+++|++|++++.+..    ...+...
T Consensus       228 ~~----~~~~w~v~~~~i~v~g~~~~~~---------~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~----~~~~~~~  290 (370)
T d3psga_         228 VS----VEGYWQITLDSITMDGETIACS---------GGCQAIVDTGTSLLTGPTSAIANIQSDIGASE----NSDGEMV  290 (370)
T ss_dssp             CS----EETTEEEEECEEESSSSEEECT---------TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE----CTTCCEE
T ss_pred             ec----ccceEEEEEeeEEeCCeEEecC---------CCccEEEecCCceEeCCHHHHHHHHHHhCCee----ecCCcEE
Confidence            94    4568999999999999887643         24579999999999999999999999987653    2233333


Q ss_pred             ccccccccCcccccccEEEEEEeCCCEEEeCCCCeEEEecCCCceEE-EEEec-----CCCceeecHhhhcceEEEEECC
Q 011042          411 FDTCYNLSGFVSVRVPTVSFYFSGGPVLTLPASNFLIPVDDAGTFCF-AFAPS-----PSGLSIIGNIQQEGIQISFDGA  484 (495)
Q Consensus       411 ~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~~Cl-~~~~~-----~~~~~IlG~~fl~~~yvvfD~~  484 (495)
                      + +|+..     ..+|+|+|+|+ |++++|++++|+++.+   ..|+ +|...     .++.||||++|||++|+|||++
T Consensus       291 ~-~C~~~-----~~~P~l~f~f~-g~~~~l~~~~yi~~~~---~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~  360 (370)
T d3psga_         291 I-SCSSI-----DSLPDIVFTID-GVQYPLSPSAYILQDD---DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRA  360 (370)
T ss_dssp             C-CGGGG-----GGCCCEEEEET-TEEEEECHHHHEEECS---SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETT
T ss_pred             E-ecccc-----CCCceEEEEEC-CEEEEEChHHeEEEcC---CeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECC
Confidence            2 68764     67999999996 9999999999999754   4473 55432     3457999999999999999999


Q ss_pred             CCEEEEeeCC
Q 011042          485 NGFVGFGPNV  494 (495)
Q Consensus       485 ~~~IGFa~~~  494 (495)
                      ++||||||+.
T Consensus       361 ~~~IGfAp~a  370 (370)
T d3psga_         361 NNKVGLAPVA  370 (370)
T ss_dssp             TTEEEEEEBC
T ss_pred             CCEEEEEecC
Confidence            9999999973
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure