Citrus Sinensis ID: 011045

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-----
MAPIKPFVLFTITTILFSFCLFTSASSRGLSETATTVLDVSSALQQTEHILSFEPETLEPFAEESETAAESFPLNSSSSFSLPLHSREILHKTRHNDYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAEAQILPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLTKQIKATSLAYCLVDRDSPASGVLEFNSARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC
cccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEcccccccEEEEEccccccccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEEEEEEEEccccccccEEEEEEEccccccccccEEEEcccccccHHHHcccccEEEEccccccccccEEEcccccccccEEEccccccccccEEEEEEEEEEEccEEEccccccccccccccccEEEcccccEEEEcHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEccccEEEEccccEEEEEccccEEEEEEEccccccEEEEEEEEccEEEEEEccccEEEEEcccc
ccccHHHHHHHHHHHHHHHHHHccccccccccccccEEcHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEEcccccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHcHHHccccccccccccccccccccccccccEEEEEEEEccccccEEEEEEcccccEEEEcccccHHHccccccccccccccccEcccccHHHHccccccccccccEEEEEEccccccEEEEEEEEEEEcccEEcccEEEEEcccccccccccccEEEccccccccHHHccccEEEEEEcccccccccEEEEcccccccccccccccccccccEEEEEEEEEEEccEEEEccHHHEEEccccccEEEEEcccEEEEccHHHHHHHHHHHHHHHccccccccccccccEEEcccccEcEccEEEEEEccccEccccHcHEEEEEccccEEEEEEccccccEEEEEEEEEccEEEEEEccccEEEEccccc
MAPIKPFVLFTITTILFSFCLFtsassrglsetaTTVLDVSSALQQTEhilsfepetlepfaeesetaaesfplnssssfslplhsreilhktrhnDYRSLVLSRLERDSARVNTLITKLQLAIYNvdrhelkpaeaqilpedfstpvvsgasqgsgeyfsrigvgtpprqfsmvldtgsdinwlqcrpctecyqqsdpifdpktsssysplpcaapqcksldvsacranrCLYQVaygdgsftvGDLVTETvsfgnsgsvkgialgcghdneglfvgsagllglgggmlsLTKQIKATSLAYclvdrdspasgvlefnsarggdavtaplirnkkvdTFYYVGLtgfsvggqavqippslfemdeagdggiivDCGTAITRLQTQAYNSLRDSFVRLagnlkptsgvalfdtcydfsglrsvrvptvslhfgagkaldlpaknylipvdsagtfcfafaptssaLSIIGNvqqqgtrvsfdlannrvgftpnkc
MAPIKPFVLFTITTILFSFCLFTSASSRGLSETATTVLDVSSALQQTEHILSFEPETLEPFAEESETAAESFPLNSSSSFSLPLHSREilhktrhndyrSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAeaqilpedfstPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLTKQIKATSLAYCLVDRDSPASGVLefnsarggdavtaplirnKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFdlannrvgftpnkc
MAPIKPFVLFTITTILFSFCLFTSASSRGLSETATTVLDVSSALQQTEHILSFEPETLepfaeesetaaesfplnssssfslplhsREILHKTRHNDYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAEAQILPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEglfvgsagllglgggmlslTKQIKATSLAYCLVDRDSPASGVLEFNSARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC
****KPFVLFTITTILFSFCLFTSASS**L***ATTVLDV*******************************************************NDYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAEAQIL*****************EYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIF**********LPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLTKQIKATSLAYCLVDRDSPASGVLEFNSARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLAN**********
****KPFVLFTITTILFSFCLFTSASS******ATTVLDVSSALQQTEHIL********************************************************RDSAR**************************************GASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFD***S****PLPCAA*QCKSL***ACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLTKQIKATSLAYCLVD*************ARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVR**********VALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC
MAPIKPFVLFTITTILFSFCLFTSASSRGLSETATTVLDVSSALQQTEHILSFEPETLEP*******************FSLPLHSREILHKTRHNDYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAEAQILPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLTKQIKATSLAYCLVDRDSPASGVLEFNSARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC
*APIKPFVLFTITTILFSFCLFTSASSRGLSETATTVLDVSSALQQTEHIL***************************SFSLPLHSREILHKTRHNDYRSLVLSRLERDSARVNTLITKLQLAIYNVDR*************DFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLTKQIKATSLAYCLVDRDSPASGVLEFNSARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAPIKPFVLFTITTILFSFCLFTSASSRGLSETATTVLDVSSALQQTEHILSFEPETLEPFAEESETAAESFPLNSSSSFSLPLHSREILHKTRHNDYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAEAQILPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLTKQIKATSLAYCLVDRDSPASGVLEFNSARGGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query495 2.2.26 [Sep-21-2011]
Q9LS40500 Protein ASPARTIC PROTEASE yes no 0.961 0.952 0.632 1e-175
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.840 0.885 0.460 1e-98
Q766C3437 Aspartic proteinase nepen N/A no 0.816 0.924 0.389 9e-69
Q766C2438 Aspartic proteinase nepen N/A no 0.795 0.899 0.377 4e-67
Q6XBF8437 Aspartic proteinase CDR1 no no 0.670 0.759 0.359 9e-50
Q3EBM5447 Probable aspartic proteas no no 0.696 0.771 0.310 8e-40
Q9LZL3453 Aspartic proteinase PCS1 no no 0.640 0.699 0.322 1e-34
Q9S9K4475 Aspartic proteinase-like no no 0.658 0.686 0.260 3e-24
Q9LX20528 Aspartic proteinase-like no no 0.715 0.670 0.254 1e-16
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.638 0.770 0.236 6e-13
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function desciption
 Score =  615 bits (1585), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 306/484 (63%), Positives = 385/484 (79%), Gaps = 8/484 (1%)

Query: 19  FCLFTSASSRGLSET-ATTVLDVSSALQQTEHILSFEPETLEPFAEESETAAESFPLNSS 77
           F   T ASSR LS    T VLDV S+LQQT+ ILS +P        + E+ ++    NSS
Sbjct: 18  FLTTTDASSRSLSTPPKTNVLDVVSSLQQTQTILSLDPTRSSLTTTKPESLSDPVFFNSS 77

Query: 78  SSFSLPLHSREILHKTRHNDYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPA-- 135
           S  SL LHSR+    ++H DY+SL LSRLERDS+RV  ++ K++ A+  VDR +LKP   
Sbjct: 78  SPLSLELHSRDTFVASQHKDYKSLTLSRLERDSSRVAGIVAKIRFAVEGVDRSDLKPVYN 137

Query: 136 -EAQILPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECY 194
            + +   ED +TPVVSGASQGSGEYFSRIGVGTP ++  +VLDTGSD+NW+QC PC +CY
Sbjct: 138 EDTRYQTEDLTTPVVSGASQGSGEYFSRIGVGTPAKEMYLVLDTGSDVNWIQCEPCADCY 197

Query: 195 QQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVS 254
           QQSDP+F+P +SS+Y  L C+APQC  L+ SACR+N+CLYQV+YGDGSFTVG+L T+TV+
Sbjct: 198 QQSDPVFNPTSSSTYKSLTCSAPQCSLLETSACRSNKCLYQVSYGDGSFTVGELATDTVT 257

Query: 255 FGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLTKQIKATSLAYCLVDRDSPASG 314
           FGNSG +  +ALGCGHDNEGLF G+AGLLGLGGG+LS+T Q+KATS +YCLVDRDS  S 
Sbjct: 258 FGNSGKINNVALGCGHDNEGLFTGAAGLLGLGGGVLSITNQMKATSFSYCLVDRDSGKSS 317

Query: 315 VLEFNSAR--GGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGI 372
            L+FNS +  GGDA TAPL+RNKK+DTFYYVGL+GFSVGG+ V +P ++F++D +G GG+
Sbjct: 318 SLDFNSVQLGGGDA-TAPLLRNKKIDTFYYVGLSGFSVGGEKVVLPDAIFDVDASGSGGV 376

Query: 373 IVDCGTAITRLQTQAYNSLRDSFVRLAGNLKP-TSGVALFDTCYDFSGLRSVRVPTVSLH 431
           I+DCGTA+TRLQTQAYNSLRD+F++L  NLK  +S ++LFDTCYDFS L +V+VPTV+ H
Sbjct: 377 ILDCGTAVTRLQTQAYNSLRDAFLKLTVNLKKGSSSISLFDTCYDFSSLSTVKVPTVAFH 436

Query: 432 FGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFT 491
           F  GK+LDLPAKNYLIPVD +GTFCFAFAPTSS+LSIIGNVQQQGTR+++DL+ N +G +
Sbjct: 437 FTGGKSLDLPAKNYLIPVDDSGTFCFAFAPTSSSLSIIGNVQQQGTRITYDLSKNVIGLS 496

Query: 492 PNKC 495
            NKC
Sbjct: 497 GNKC 500
Aspartic protease involved in drought avoidance through abscisic acid signaling.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query495
118484458499 unknown [Populus trichocarpa] 0.927 0.919 0.689 1e-179
312281631502 unnamed protein product [Thellungiella h 0.987 0.974 0.65 1e-178
297834758500 aspartyl protease family protein [Arabid 0.987 0.978 0.634 1e-176
255541796495 Aspartic proteinase nepenthesin-1 precur 0.985 0.985 0.647 1e-174
15229656500 aspartyl protease family protein [Arabid 0.961 0.952 0.632 1e-173
19424106500 putative chloroplast nucleoid DNA-bindin 0.961 0.952 0.632 1e-173
356531224492 PREDICTED: aspartic proteinase nepenthes 0.925 0.930 0.688 1e-171
225455876496 PREDICTED: aspartic proteinase nepenthes 0.947 0.945 0.638 1e-170
449486856491 PREDICTED: protein ASPARTIC PROTEASE IN 0.917 0.924 0.655 1e-168
449439383491 PREDICTED: protein ASPARTIC PROTEASE IN 0.917 0.924 0.652 1e-168
>gi|118484458|gb|ABK94105.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 317/460 (68%), Positives = 380/460 (82%), Gaps = 1/460 (0%)

Query: 37  VLDVSSALQQTEHILSFEPETLEPFAEESETAAESFPLNSSSSFSLPLHSREILHKTRHN 96
           +LDV+S+LQQ  +ILSF+ +T +     + T +     NSS SFSL LH RE ++K  H 
Sbjct: 39  ILDVASSLQQAHNILSFDLQTQKSSTHTTITTSTPSFSNSSLSFSLELHPRETIYKIHHK 98

Query: 97  DYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAEAQILPEDFSTPVVSGASQGS 156
           DY+SLVLSRL RD+ R N+L  +LQLA+ ++ + +LKP E +I PED STPV SG SQGS
Sbjct: 99  DYKSLVLSRLHRDTVRFNSLTARLQLALEDISKSDLKPLETEIKPEDLSTPVTSGTSQGS 158

Query: 157 GEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAA 216
           GEYF+R+GVG P RQF MVLDTGSDINWLQC+PCT+CYQQ+DPIFDP  SS+Y+P+ C +
Sbjct: 159 GEYFTRVGVGNPARQFYMVLDTGSDINWLQCQPCTDCYQQTDPIFDPTASSTYAPVTCQS 218

Query: 217 PQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF 276
            QC SL++S+CR+ +CLYQV YGDGS+T GD  TE+VSFGNSGSVK +ALGCGHDNEGLF
Sbjct: 219 QQCSSLEMSSCRSGQCLYQVNYGDGSYTFGDFATESVSFGNSGSVKNVALGCGHDNEGLF 278

Query: 277 VGSAGLLGLGGGMLSLTKQIKATSLAYCLVDRDSPASGVLEFNSAR-GGDAVTAPLIRNK 335
           VG+AGLLGLGGG LSLT Q+KATS +YCLV+RDS  S  L+FNSA+ G D+VTAPL++N+
Sbjct: 279 VGAAGLLGLGGGPLSLTNQLKATSFSYCLVNRDSAGSSTLDFNSAQLGVDSVTAPLMKNR 338

Query: 336 KVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSF 395
           K+DTFYYVGL+G SVGGQ V IP S F +DE+G+GGIIVDCGTAITRLQTQAYN LRD+F
Sbjct: 339 KIDTFYYVGLSGMSVGGQMVSIPESTFRLDESGNGGIIVDCGTAITRLQTQAYNPLRDAF 398

Query: 396 VRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTF 455
           VR+  NLK TS VALFDTCYD SG  SVRVPTVS HF  GK+ +LPA NYLIPVDSAGT+
Sbjct: 399 VRMTQNLKLTSAVALFDTCYDLSGQASVRVPTVSFHFADGKSWNLPAANYLIPVDSAGTY 458

Query: 456 CFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495
           CFAFAPT+S+LSIIGNVQQQGTRV+FDLANNR+GF+PNKC
Sbjct: 459 CFAFAPTTSSLSIIGNVQQQGTRVTFDLANNRMGFSPNKC 498

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|312281631|dbj|BAJ33681.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|297834758|ref|XP_002885261.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297331101|gb|EFH61520.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255541796|ref|XP_002511962.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223549142|gb|EEF50631.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15229656|ref|NP_188478.1| aspartyl protease family protein [Arabidopsis thaliana] gi|75273882|sp|Q9LS40.1|ASPG1_ARATH RecName: Full=Protein ASPARTIC PROTEASE IN GUARD CELL 1; Short=AtASPG1; Flags: Precursor gi|11994113|dbj|BAB01116.1| CND41, chloroplast nucleoid DNA binding protein-like [Arabidopsis thaliana] gi|23297732|gb|AAN13013.1| putative chloroplast nucleoid DNA-binding protein [Arabidopsis thaliana] gi|332642583|gb|AEE76104.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|19424106|gb|AAL87345.1| putative chloroplast nucleoid DNA-binding protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356531224|ref|XP_003534178.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|225455876|ref|XP_002275164.1| PREDICTED: aspartic proteinase nepenthesin-2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449486856|ref|XP_004157423.1| PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449439383|ref|XP_004137465.1| PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query495
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.979 0.97 0.572 6.7e-152
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.965 0.989 0.504 1.2e-131
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.943 0.962 0.458 9.1e-100
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.775 0.795 0.479 3e-93
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.806 0.848 0.435 4.3e-93
TAIR|locus:2183715464 AT5G10760 [Arabidopsis thalian 0.751 0.801 0.357 2.4e-60
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.787 0.845 0.351 6.9e-59
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.753 0.786 0.354 1.4e-57
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.670 0.759 0.348 1.5e-51
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.662 0.761 0.328 1.1e-48
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1482 (526.7 bits), Expect = 6.7e-152, P = 6.7e-152
 Identities = 283/494 (57%), Positives = 357/494 (72%)

Query:     9 LFTITTILFSFCLFTSASSRGLSETA-TTVLDVSSALQQTEHILSFEPETLXXXXXXXXX 67
             L  + T+   F   T ASSR LS    T VLDV S+LQQT+ ILS +P            
Sbjct:     9 LLAVVTLSL-FLTTTDASSRSLSTPPKTNVLDVVSSLQQTQTILSLDPTRSSLTTTKPES 67

Query:    68 XXXXXXXXXXXXXXXXXXXREILHKTRHNDYRSLVLSRLERDSARVNTLITKLQLAIYNV 127
                                R+    ++H DY+SL LSRLERDS+RV  ++ K++ A+  V
Sbjct:    68 LSDPVFFNSSSPLSLELHSRDTFVASQHKDYKSLTLSRLERDSSRVAGIVAKIRFAVEGV 127

Query:   128 DRHELKPA---EAQILPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINW 184
             DR +LKP    + +   ED +TPVVSGASQGSGEYFSRIGVGTP ++  +VLDTGSD+NW
Sbjct:   128 DRSDLKPVYNEDTRYQTEDLTTPVVSGASQGSGEYFSRIGVGTPAKEMYLVLDTGSDVNW 187

Query:   185 LQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFT 244
             +QC PC +CYQQSDP+F+P +SS+Y  L C+APQC  L+ SACR+N+CLYQV+YGDGSFT
Sbjct:   188 IQCEPCADCYQQSDPVFNPTSSSTYKSLTCSAPQCSLLETSACRSNKCLYQVSYGDGSFT 247

Query:   245 VGDLVTETVSFGNSGSVKGIALGCGHDNEXXXXXXXXXXXXXXXXXXXTKQIKATSLAYC 304
             VG+L T+TV+FGNSG +  +ALGCGHDNE                   T Q+KATS +YC
Sbjct:   248 VGELATDTVTFGNSGKINNVALGCGHDNEGLFTGAAGLLGLGGGVLSITNQMKATSFSYC 307

Query:   305 LVDRDSPASGVLEFNSAR--GGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLF 362
             LVDRDS  S  L+FNS +  GGDA TAPL+RNKK+DTFYYVGL+GFSVGG+ V +P ++F
Sbjct:   308 LVDRDSGKSSSLDFNSVQLGGGDA-TAPLLRNKKIDTFYYVGLSGFSVGGEKVVLPDAIF 366

Query:   363 EMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKP-TSGVALFDTCYDFSGLR 421
             ++D +G GG+I+DCGTA+TRLQTQAYNSLRD+F++L  NLK  +S ++LFDTCYDFS L 
Sbjct:   367 DVDASGSGGVILDCGTAVTRLQTQAYNSLRDAFLKLTVNLKKGSSSISLFDTCYDFSSLS 426

Query:   422 SVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSF 481
             +V+VPTV+ HF  GK+LDLPAKNYLIPVD +GTFCFAFAPTSS+LSIIGNVQQQGTR+++
Sbjct:   427 TVKVPTVAFHFTGGKSLDLPAKNYLIPVDDSGTFCFAFAPTSSSLSIIGNVQQQGTRITY 486

Query:   482 DLANNRVGFTPNKC 495
             DL+ N +G + NKC
Sbjct:   487 DLSKNVIGLSGNKC 500
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0009414 "response to water deprivation" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
GO:0070001 "aspartic-type peptidase activity" evidence=IDA
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183715 AT5G10760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LS40ASPG1_ARATH3, ., 4, ., 2, 3, ., -0.63220.96160.952yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.3__2052__AT3G18490.1
annotation not avaliable (500 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-136
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 9e-82
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 2e-80
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-45
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 8e-27
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 1e-25
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 4e-23
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 7e-22
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 3e-19
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 2e-13
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 6e-11
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 7e-10
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 9e-10
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 2e-09
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 2e-09
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-09
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 3e-09
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 2e-08
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 1e-07
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 1e-06
cd05487326 cd05487, renin_like, Renin stimulates production o 9e-05
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information 
 Score =  393 bits (1013), Expect = e-136
 Identities = 160/345 (46%), Positives = 198/345 (57%), Gaps = 53/345 (15%)

Query: 158 EYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAP 217
           EY   +G+GTP R  ++++DTGSD+ W+QC+PC                           
Sbjct: 1   EYVVTVGLGTPARDQTVIVDTGSDLTWVQCQPC--------------------------- 33

Query: 218 QCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFV 277
                         CLYQV+YGDGS+T GDL T+T++ G+S  V G A GCGHDNEGLF 
Sbjct: 34  --------------CLYQVSYGDGSYTTGDLATDTLTLGSSDVVPGFAFGCGHDNEGLFG 79

Query: 278 GSAGLLGLGGGMLSLTKQIKAT---SLAYCLVDRDSPASGVLEFNSA--RGGDAVTAPLI 332
           G+AGLLGLG G LSL  Q  ++     +YCL DR S +SG L F +A      A   P++
Sbjct: 80  GAAGLLGLGRGKLSLPSQTASSYGGVFSYCLPDRSSSSSGYLSFGAAASVPAGASFTPML 139

Query: 333 RNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLR 392
            N +V TFYYVGLTG SVGG+ + IPP        G GG+I+D GT ITRL   AY +LR
Sbjct: 140 SNPRVPTFYYVGLTGISVGGRRLPIPP-----ASFGAGGVIIDSGTVITRLPPSAYAALR 194

Query: 393 DSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSA 452
           D+F           G ++ DTCYD SG RSV VPTVSLHF  G  ++L A   L PVD +
Sbjct: 195 DAFRAAMAAYPRAPGFSILDTCYDLSGFRSVSVPTVSLHFQGGADVELDASGVLYPVDDS 254

Query: 453 GTFCFAFAPTS--SALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495
              C AFA TS    LSIIGNVQQQ  RV +D+A  R+GF P  C
Sbjct: 255 SQVCLAFAGTSDDGGLSIIGNVQQQTFRVVYDVAGGRIGFAPGGC 299

Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 299
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 495
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.98
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.96
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.9
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.96
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.51
PF1365090 Asp_protease_2: Aspartyl protease 96.07
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.76
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.14
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 92.65
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 90.1
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 88.75
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 87.45
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 86.18
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 86.13
COG3577215 Predicted aspartyl protease [General function pred 81.81
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 81.79
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 80.25
PF1365090 Asp_protease_2: Aspartyl protease 80.03
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.2e-74  Score=603.30  Aligned_cols=392  Identities=34%  Similarity=0.669  Sum_probs=328.9

Q ss_pred             cCCCCeeEEEEEcccCCCCC---CCCChhHHHHHHHHHhHHHHHHHHHHhhhhhcccccccCcccccccCCCceeecccc
Q 011045           74 LNSSSSFSLPLHSREILHKT---RHNDYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAEAQILPEDFSTPVVS  150 (495)
Q Consensus        74 ~~~~~~~~l~l~hr~~~~~~---~~~~~~~~~~~~~~~d~~R~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  150 (495)
                      ++...+++++|+||++++++   .+.+..++++++++||.+|++++.++..                  .    ..|+.+
T Consensus        19 ~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~------------------~----~~~~~~   76 (431)
T PLN03146         19 EAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDA------------------S----PNDPQS   76 (431)
T ss_pred             cccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccc------------------c----CCcccc
Confidence            34556799999999998764   3456778999999999999999865421                  0    124444


Q ss_pred             CCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCC-CcCC
Q 011045          151 GASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVS-ACRA  229 (495)
Q Consensus       151 ~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~-~C~~  229 (495)
                      +...++++|+++|.||||||++.|++||||+++||+|.+|..|+.|.++.|||++|+||+.++|+++.|..+... .|..
T Consensus        77 ~~~~~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~  156 (431)
T PLN03146         77 DLISNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSD  156 (431)
T ss_pred             CcccCCccEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCC
Confidence            444567899999999999999999999999999999999999999999999999999999999999999887654 3765


Q ss_pred             CC-cceeeecCCCceEEEEEEEEEEEECCC----ccccceEEeEEecCCCCcc-CcceeEeccCCCCCcccccC---CCe
Q 011045          230 NR-CLYQVAYGDGSFTVGDLVTETVSFGNS----GSVKGIALGCGHDNEGLFV-GSAGLLGLGGGMLSLTKQIK---ATS  300 (495)
Q Consensus       230 ~~-c~y~~~Ygdgs~~~G~~~~Dtlt~g~~----~~v~~~~fG~~~~~~g~~~-~~~GIlGLg~~~~S~~sQl~---~~~  300 (495)
                      ++ |.|.+.|+||+.+.|.+++|+|+|++.    ..++++.|||++++.+.|. ..+||||||++++|+++|+.   .++
T Consensus       157 ~~~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~~  236 (431)
T PLN03146        157 ENTCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGK  236 (431)
T ss_pred             CCCCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCCc
Confidence            44 999999999998889999999999832    3689999999999888773 58999999999999999986   368


Q ss_pred             EEEEecCCCC--CCcceEEeccCCCC---CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEc
Q 011045          301 LAYCLVDRDS--PASGVLEFNSARGG---DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVD  375 (495)
Q Consensus       301 FS~~L~~~~~--~~~g~L~fGg~d~~---~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiD  375 (495)
                      |||||.+..+  ...|.|+||+...-   .+.|+||+.+. .+.+|+|+|++|+||++++.++...|.  ..+.+++|||
T Consensus       237 FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~-~~~~y~V~L~gIsVgg~~l~~~~~~~~--~~~~g~~iiD  313 (431)
T PLN03146        237 FSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKD-PDTFYYLTLEAISVGSKKLPYTGSSKN--GVEEGNIIID  313 (431)
T ss_pred             EEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCC-CCCeEEEeEEEEEECCEECcCCccccc--cCCCCcEEEe
Confidence            9999976432  23799999996432   58999998642 257999999999999999998887765  3456789999


Q ss_pred             cCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecCCCcE
Q 011045          376 CGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTF  455 (495)
Q Consensus       376 SGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~g~~  455 (495)
                      |||++|+||+++|++|+++|.+.+...+.......++.||+...  ...+|+|+||| +|+++.|++++|+++.. .+..
T Consensus       314 SGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~--~~~~P~i~~~F-~Ga~~~l~~~~~~~~~~-~~~~  389 (431)
T PLN03146        314 SGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTS--DIKLPIITAHF-TGADVKLQPLNTFVKVS-EDLV  389 (431)
T ss_pred             CCccceecCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCC--CCCCCeEEEEE-CCCeeecCcceeEEEcC-CCcE
Confidence            99999999999999999999988764333333345778998432  25799999999 69999999999999876 4678


Q ss_pred             EEEEEecCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045          456 CFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC  495 (495)
Q Consensus       456 Cl~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C  495 (495)
                      |+++.+. .+.||||+.|||++||+||++++|||||+.+|
T Consensus       390 Cl~~~~~-~~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C  428 (431)
T PLN03146        390 CFAMIPT-SSIAIFGNLAQMNFLVGYDLESKTVSFKPTDC  428 (431)
T ss_pred             EEEEecC-CCceEECeeeEeeEEEEEECCCCEEeeecCCc
Confidence            9998876 34699999999999999999999999999999

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 7e-08
3vla_A413 Crystal Structure Of Edgp Length = 413 8e-08
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 6e-07
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 7e-07
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 6e-06
1b5f_A239 Native Cardosin A From Cynara Cardunculus L. Length 7e-06
3oad_A166 Design And Optimization Of New Piperidines As Renin 1e-05
3d91_A341 Human Renin In Complex With Remikiren Length = 341 1e-05
2bks_A340 Crystal Structure Of Renin-Pf00074777 Complex Lengt 1e-05
3vcm_A335 Crystal Structure Of Human Prorenin Length = 335 1e-05
1hrn_A337 High Resolution Crystal Structures Of Recombinant H 1e-05
2g24_A333 Ketopiperazine-Based Renin Inhibitors: Optimization 1e-05
2i4q_A336 Human ReninPF02342674 COMPLEX Length = 336 1e-05
2x0b_A383 Crystal Structure Of Human Angiotensinogen Complexe 1e-05
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 2e-05
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 2e-05
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 2e-05
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 2e-05
1qdm_A478 Crystal Structure Of Prophytepsin, A Zymogen Of A B 3e-05
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 6e-05
1flh_A326 Crystal Structure Of Human Uropepsin At 2.45 A Reso 6e-05
1pso_E326 The Crystal Structure Of Human Pepsin And Its Compl 6e-05
3cms_A323 Engineering Enzyme Sub-Site Specificity: Preparatio 7e-05
1czi_E323 Chymosin Complex With The Inhibitor Cp-113972 Lengt 7e-05
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 2e-04
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 2e-04
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 2e-04
3fv3_A339 Secreted Aspartic Protease 1 From Candida Parapsilo 4e-04
1smr_A335 The 3-D Structure Of Mouse Submaxillary Renin Compl 5e-04
3psg_A370 The High Resolution Crystal Structure Of Porcine Pe 6e-04
2psg_A370 Refined Structure Of Porcine Pepsinogen At 1.8 Angs 6e-04
1htr_B329 Crystal And Molecular Structures Of Human Progastri 6e-04
5pep_A326 X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim 6e-04
1f34_A326 Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou 7e-04
1psa_A326 Structure Of A Pepsin(Slash)renin Inhibitor Complex 7e-04
3pep_A326 Revised 2.3 Angstroms Structure Of Porcine Pepsin. 7e-04
4pep_A326 The Molecular And Crystal Structures Of Monoclinic 7e-04
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 341 YYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVR--L 398
           Y++G+    +  + V +  SL  +  AG GG  +      T L+T  Y ++ ++F++   
Sbjct: 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA 296
Query: 399 AGNLKPTSGVALFDTCYDFSGLRSVR----VPTVSLHFGAGKAL-DLPAKNYLIPVDSAG 453
           A N+   + VA F  C+    + S R    VP++ L   +   +  +   N ++ ++   
Sbjct: 297 ARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND-N 355
Query: 454 TFCFAFAPTSSALS---IIGNVQQQGTRVSFDLANNRVGFT 491
             C       S L    +IG  Q +   V FDLA +RVGF+
Sbjct: 356 VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFS 396
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L. Length = 239 Back     alignment and structure
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin Inhibitors Length = 166 Back     alignment and structure
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 Back     alignment and structure
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 Back     alignment and structure
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 Back     alignment and structure
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 Back     alignment and structure
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 Back     alignment and structure
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 Back     alignment and structure
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 Back     alignment and structure
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution Length = 326 Back     alignment and structure
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With Pepstatin Length = 326 Back     alignment and structure
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation, Kinetic Characterization And X-Ray Analysis At 2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf Chymosin Length = 323 Back     alignment and structure
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 Back     alignment and structure
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 Back     alignment and structure
>pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed With A Decapeptide Inhibitor Ch-66 Based On The 4-16 Fragment Of Rat Angiotensinogen Length = 335 Back     alignment and structure
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 Back     alignment and structure
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 Back     alignment and structure
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 Back     alignment and structure
>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 Back     alignment and structure
>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 Back     alignment and structure
>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query495
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 7e-98
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 5e-88
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 2e-82
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-28
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 5e-28
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 5e-27
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 3e-26
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 5e-26
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 6e-25
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-24
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 2e-24
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 4e-24
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 6e-23
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 2e-22
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 3e-22
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 5e-22
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 6e-22
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-21
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 3e-21
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 4e-21
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 4e-21
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 7e-21
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 8e-21
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 8e-21
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 3e-20
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 1e-19
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 2e-19
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 2e-19
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 2e-18
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 1e-15
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 3e-14
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-13
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 2e-05
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 5e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  300 bits (768), Expect = 7e-98
 Identities = 64/383 (16%), Positives = 122/383 (31%), Gaps = 36/383 (9%)

Query: 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDP 203
              PV +  S  +G +++ +   TP  Q  +++D   +  W+ C           P    
Sbjct: 10  VVLPVQNDGS--TGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHS 67

Query: 204 KTSSSYSPLPCAAPQCKSLDVSACRANRC-LYQVAYGDGSFTVGDLVTETVSFG------ 256
              S  +   C    C +     C  N C L           +G+L  + ++        
Sbjct: 68  TQCSRANTHQC--LSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGST 125

Query: 257 ----NSGSVKGIALGCGHD---NEGLFVGSAGLLGLGGGMLSLTKQIKAT-----SLAYC 304
                  +V      C       +GL   + G+ GLG   +SL  Q+ +          C
Sbjct: 126 QQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTC 185

Query: 305 LVDRDSPASGVLEFNSARGGDAVTAPLIRNKKVDT--------FYYVGLTGFSVGGQAVQ 356
           L    +    ++  ++           I +    T         Y V +    +   +V 
Sbjct: 186 LSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVF 245

Query: 357 -IPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCY 415
            +      +  +  GG ++   T    LQ   Y +    F +          VA F  C+
Sbjct: 246 PLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCF 305

Query: 416 DFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSS---ALSIIGNV 472
           + + + +     + +    G    +  ++ ++     G  C           A   +G  
Sbjct: 306 NSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP-GVTCLGVMNGGMQPRAEITLGAR 364

Query: 473 QQQGTRVSFDLANNRVGFTPNKC 495
           Q +   V FDLA +RVGF+ +  
Sbjct: 365 QLEENLVVFDLARSRVGFSTSSL 387
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 87 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query495
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.86
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.66
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.85
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 92.2
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.17
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 80.2
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=5.4e-63  Score=517.25  Aligned_cols=337  Identities=24%  Similarity=0.462  Sum_probs=286.8

Q ss_pred             CCCceeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccc
Q 011045          140 LPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQC  219 (495)
Q Consensus       140 ~~~~~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C  219 (495)
                      +...+..||..+.  .+++|+++|.||||||++.|+|||||+++||+|.+|             .+|+||+.+.|.++.|
T Consensus         5 ~~~~~~~pv~~d~--~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C   69 (413)
T 3vla_A            5 RPSALVVPVKKDA--STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQC   69 (413)
T ss_dssp             CCSEEEEEEEECT--TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHH
T ss_pred             CCccEEEEeeecC--CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccc
Confidence            4567889999885  579999999999999999999999999999999875             2799999999999999


Q ss_pred             cCCCCC-----------CcCCCCcceeeecC-CCceEEEEEEEEEEEECC--------CccccceEEeEEecC--CCCcc
Q 011045          220 KSLDVS-----------ACRANRCLYQVAYG-DGSFTVGDLVTETVSFGN--------SGSVKGIALGCGHDN--EGLFV  277 (495)
Q Consensus       220 ~~~~~~-----------~C~~~~c~y~~~Yg-dgs~~~G~~~~Dtlt~g~--------~~~v~~~~fG~~~~~--~g~~~  277 (495)
                      ......           .|.++.|.|.+.|+ |++.+.|++++|+|+|+.        ...++++.|||++.+  .+.+.
T Consensus        70 ~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~  149 (413)
T 3vla_A           70 SLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLAS  149 (413)
T ss_dssp             HHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCT
T ss_pred             cccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccc
Confidence            876433           35555699999995 888788999999999962        257889999999986  45567


Q ss_pred             CcceeEeccCCCCCcccccC-----CCeEEEEecCCCCCCcceEEeccCCC---------CC-ceeeeeecCCCC-----
Q 011045          278 GSAGLLGLGGGMLSLTKQIK-----ATSLAYCLVDRDSPASGVLEFNSARG---------GD-AVTAPLIRNKKV-----  337 (495)
Q Consensus       278 ~~~GIlGLg~~~~S~~sQl~-----~~~FS~~L~~~~~~~~g~L~fGg~d~---------~~-~~~tpl~~~~~~-----  337 (495)
                      .++||||||++++|+++||.     .++|||||.+. ....|.|+||+.+.         ++ ++|+||+.++..     
T Consensus       150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~-~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~  228 (413)
T 3vla_A          150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS-TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATS  228 (413)
T ss_dssp             TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC-SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSC
T ss_pred             ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCC-CCCceEEEECCCcccccccccccCCceeEeecccCCccccccc
Confidence            79999999999999999987     48999999874 34479999999874         15 999999987533     


Q ss_pred             -----CeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhc--CCCCCCCCcc
Q 011045          338 -----DTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAG--NLKPTSGVAL  410 (495)
Q Consensus       338 -----~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~--~~~~~~~~~~  410 (495)
                           ..+|+|+|++|+||++.+.+++..|..+.++++++||||||++|+||+++|++|+++|++.+.  ++++..+...
T Consensus       229 ~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~  308 (413)
T 3vla_A          229 TQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAP  308 (413)
T ss_dssp             CTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTT
T ss_pred             cccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCC
Confidence                 279999999999999999999888888777788999999999999999999999999998864  4444444445


Q ss_pred             cccccccCCCcc----cccceEEEEEcC-CcEEEeCCCCceEEecCCCcEEEEEEecC---CCceeecHHhhcceEEEEe
Q 011045          411 FDTCYDFSGLRS----VRVPTVSLHFGA-GKALDLPAKNYLIPVDSAGTFCFAFAPTS---SALSIIGNVQQQGTRVSFD  482 (495)
Q Consensus       411 ~~~C~~~~~~~~----~~~P~ltf~f~g-g~~~~lp~~~y~~~~~~~g~~Cl~~~~~~---~~~~IlG~~fl~~~yvvfD  482 (495)
                      ++.||++++...    ..+|+|+|+|.| ++.|+|++++|+++.+ ++..|++|...+   ++.||||+.|||++|+|||
T Consensus       309 ~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD  387 (413)
T 3vla_A          309 FGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN-DNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFD  387 (413)
T ss_dssp             CSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE-TTEEEECEEEEESSCSSSEEECHHHHTTEEEEEE
T ss_pred             CcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC-CCcEEEEEEecCCCcccceeEehhhhcCeEEEEE
Confidence            788999876532    479999999954 3899999999999876 477899888753   2579999999999999999


Q ss_pred             CCCCEEEEeeC
Q 011045          483 LANNRVGFTPN  493 (495)
Q Consensus       483 ~~~~rIGFa~~  493 (495)
                      ++++|||||++
T Consensus       388 ~~~~riGfa~~  398 (413)
T 3vla_A          388 LATSRVGFSGT  398 (413)
T ss_dssp             TTTTEEEEEEE
T ss_pred             CCCCEEEEEEe
Confidence            99999999985
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 495
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-55
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 4e-43
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 1e-42
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 2e-41
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 5e-41
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 5e-41
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 9e-41
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 2e-40
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 8e-40
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 6e-38
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-37
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-37
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 4e-37
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 9e-37
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 2e-36
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 3e-36
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 4e-36
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 5e-36
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 1e-35
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 2e-32
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 2e-32
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 2e-26
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  187 bits (476), Expect = 2e-55
 Identities = 75/386 (19%), Positives = 113/386 (29%), Gaps = 56/386 (14%)

Query: 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDP 203
              PV    +  +  Y      G       +VLD    + W  C       +        
Sbjct: 3   VLAPVTKDPA--TSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTC 55

Query: 204 KTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNS----- 258
             +++Y    C AP C S            Y      G+   G L         +     
Sbjct: 56  LLANAYPAPGCPAPSCGS---DKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKP 112

Query: 259 --GSVKGIALGCGHDNE--GLFVGSAGLLGLGGGMLSLTKQIKAT-----SLAYCLVDRD 309
                 G+   C        L  GS G+ GL    L+L  Q+ +          CL    
Sbjct: 113 VSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCL-PTG 171

Query: 310 SPASGVLEFNSAR----GGDAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMD 365
            P   +                  PL+        +Y+      VG   V +P       
Sbjct: 172 GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGG-SPAHYISARSIVVGDTRVPVPEGAL--- 227

Query: 366 EAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGN--------LKPTSGVALFDTCYDF 417
               GG+++        L+   Y  L D+F +             +    VA F  CYD 
Sbjct: 228 --ATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDT 285

Query: 418 SGLRS----VRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPT--------SSA 465
             L +      VP V L    G    +  KN ++ V   GT C AF            + 
Sbjct: 286 KTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ-GTACVAFVEMKGVAAGDGRAP 344

Query: 466 LSIIGNVQQQGTRVSFDLANNRVGFT 491
             I+G  Q +   + FD+   R+GF+
Sbjct: 345 AVILGGAQMEDFVLDFDMEKKRLGFS 370
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query495
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=3.9e-55  Score=449.32  Aligned_cols=344  Identities=24%  Similarity=0.373  Sum_probs=272.7

Q ss_pred             eEEEEEcccCCCCCCCCChhHHHHHHHHHhHHHHHHHHHHhhhhhcccccccCcccccccCCCceeeccccCCCCCceeE
Q 011045           80 FSLPLHSREILHKTRHNDYRSLVLSRLERDSARVNTLITKLQLAIYNVDRHELKPAEAQILPEDFSTPVVSGASQGSGEY  159 (495)
Q Consensus        80 ~~l~l~hr~~~~~~~~~~~~~~~~~~~~~d~~R~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~Y  159 (495)
                      +++||+++.+            +++.+.++..+.++++.|..... ....       ..........|+.+.   .+.+|
T Consensus         2 v~ipl~k~~~------------~r~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~l~n~---~d~~Y   58 (370)
T d3psga_           2 VKVPLVRKKS------------LRQNLIKDGKLKDFLKTHKHNPA-SKYF-------PEAAALIGDEPLENY---LDTEY   58 (370)
T ss_dssp             EEEEEEECCC------------HHHHHHHTTCHHHHHHHCCCCGG-GGTC-------TTSCCSSCCCTTGGG---TTCCE
T ss_pred             EEEecccCcc------------HHHHHHHcCcHHHHHHhcccchh-hhhc-------ccccCcccccccccc---cCCEE
Confidence            5788888644            67777888777777766522100 0000       011233345677764   36899


Q ss_pred             EEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCcceeeecC
Q 011045          160 FSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQVAYG  239 (495)
Q Consensus       160 ~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y~~~Yg  239 (495)
                      +++|.||||||++.|++||||+++||+|.+|..|.++.++.|||++|+||+..+                  |.|.+.|+
T Consensus        59 ~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~------------------~~~~~~Yg  120 (370)
T d3psga_          59 FGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS------------------QELSITYG  120 (370)
T ss_dssp             EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE------------------EEEEEESS
T ss_pred             EEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccCC------------------CcEEEEeC
Confidence            999999999999999999999999999999999999999999999999999887                  89999999


Q ss_pred             CCceEEEEEEEEEEEECCCccccceEEeEEecCCCCc---cCcceeEeccCCCCCccc------c------cCCCeEEEE
Q 011045          240 DGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF---VGSAGLLGLGGGMLSLTK------Q------IKATSLAYC  304 (495)
Q Consensus       240 dgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~~s------Q------l~~~~FS~~  304 (495)
                      +|+.. |.++.|++.++ +..++++.|||++...+.+   ...+||+|||++..+...      +      +..+.||+|
T Consensus       121 ~Gs~~-G~~~~d~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~  198 (370)
T d3psga_         121 TGSMT-GILGYDTVQVG-GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVY  198 (370)
T ss_dssp             SCEEE-EEEEEEEEEET-TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEE
T ss_pred             CceEE-EEEEEEEEeee-ceeeeeeEEEEEeeccCceecccccccccccccCcccccCCCchhhhhhhhcccccceeEEE
Confidence            99876 99999999999 9999999999999887754   467999999987654321      1      448999999


Q ss_pred             ecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccc
Q 011045          305 LVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAI  380 (495)
Q Consensus       305 L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~  380 (495)
                      +.+.. ...|.|+||++|+.    +++|+|+...    .+|.|.+++|.|+++.+...         ++..+||||||++
T Consensus       199 l~~~~-~~~g~l~~Gg~d~~~~~~~l~~~p~~~~----~~w~v~~~~i~v~g~~~~~~---------~~~~aiiDSGTs~  264 (370)
T d3psga_         199 LSSND-DSGSVVLLGGIDSSYYTGSLNWVPVSVE----GYWQITLDSITMDGETIACS---------GGCQAIVDTGTSL  264 (370)
T ss_dssp             EC------CEEEEETCCCGGGBSSCCEEEECSEE----TTEEEEECEEESSSSEEECT---------TCEEEEECTTCCS
T ss_pred             eecCC-CCCceEecCCcCchhcccceeEEeeccc----ceEEEEEeeEEeCCeEEecC---------CCccEEEecCCce
Confidence            97543 34799999999976    8999999764    78999999999999887642         3457999999999


Q ss_pred             eeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecCCCcEEE-EE
Q 011045          381 TRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCF-AF  459 (495)
Q Consensus       381 t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~g~~Cl-~~  459 (495)
                      ++||+++|++|++++.+...    ..+. +...|+.     ...+|+|+|+| ||+++.|++++|+++.+  + .|+ +|
T Consensus       265 ~~lp~~~~~~i~~~l~~~~~----~~~~-~~~~C~~-----~~~~P~l~f~f-~g~~~~l~~~~yi~~~~--~-~c~~~~  330 (370)
T d3psga_         265 LTGPTSAIANIQSDIGASEN----SDGE-MVISCSS-----IDSLPDIVFTI-DGVQYPLSPSAYILQDD--D-SCTSGF  330 (370)
T ss_dssp             EEEEHHHHHHHHHHTTCEEC----TTCC-EECCGGG-----GGGCCCEEEEE-TTEEEEECHHHHEEECS--S-CEEESE
T ss_pred             EeCCHHHHHHHHHHhCCeee----cCCc-EEEeccc-----cCCCceEEEEE-CCEEEEEChHHeEEEcC--C-eEEEEE
Confidence            99999999999999865432    2222 2333543     46799999999 89999999999999754  2 364 55


Q ss_pred             Eec-----CCCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045          460 APT-----SSALSIIGNVQQQGTRVSFDLANNRVGFTPNK  494 (495)
Q Consensus       460 ~~~-----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~  494 (495)
                      ...     .++.||||+.|||++|+|||++|+||||||+.
T Consensus       331 ~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         331 EGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             EEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             EEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence            432     34579999999999999999999999999973
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure