Citrus Sinensis ID: 011130
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 493 | 2.2.26 [Sep-21-2011] | |||||||
| Q8S528 | 534 | Aldehyde dehydrogenase fa | yes | no | 0.916 | 0.846 | 0.712 | 0.0 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 0.981 | 0.899 | 0.658 | 0.0 | |
| Q2XQV4 | 521 | Aldehyde dehydrogenase, m | yes | no | 0.864 | 0.817 | 0.527 | 1e-138 | |
| P20000 | 520 | Aldehyde dehydrogenase, m | yes | no | 0.894 | 0.848 | 0.514 | 1e-138 | |
| Q66HF8 | 519 | Aldehyde dehydrogenase X, | yes | no | 0.894 | 0.849 | 0.502 | 1e-136 | |
| P81178 | 500 | Aldehyde dehydrogenase, m | N/A | no | 0.886 | 0.874 | 0.516 | 1e-136 | |
| P11884 | 519 | Aldehyde dehydrogenase, m | no | no | 0.894 | 0.849 | 0.510 | 1e-136 | |
| P47738 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.894 | 0.849 | 0.512 | 1e-136 | |
| P05091 | 517 | Aldehyde dehydrogenase, m | yes | no | 0.929 | 0.885 | 0.498 | 1e-135 | |
| Q5R6B5 | 517 | Aldehyde dehydrogenase X, | yes | no | 0.894 | 0.852 | 0.495 | 1e-135 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function desciption |
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Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/505 (71%), Positives = 408/505 (80%), Gaps = 53/505 (10%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G S+ AAA E+ ITPPVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI V+EG+
Sbjct: 30 GAQRYSNLAAAVENTITPPVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGD 89
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
AEDVNRAV+AARKAFDEGPWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQ
Sbjct: 90 AEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQ 149
Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG------------- 208
SAQ EVPM R+FRYYAGWADKI G+T P DGP+HVQTLHEPIGVAG
Sbjct: 150 SAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLS 209
Query: 209 ----------------------------------------VLNIVSGYGPTAGAALASHM 228
V+NIVSG+G TAGAA+ASHM
Sbjct: 210 WKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHM 269
Query: 229 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 288
+VDK+AFTGST GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFF
Sbjct: 270 DVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFF 329
Query: 289 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 348
NQGQCCCAGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKY
Sbjct: 330 NQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKY 389
Query: 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408
I+ GV+ GA L+ GG+RLG+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEV
Sbjct: 390 IKHGVEAGATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEV 449
Query: 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 468
I R+N S+YGLAAGVFT NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GRE
Sbjct: 450 IARANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGRE 509
Query: 469 KGSYSLSNYLQVKAVVTALKNPAWL 493
KG YSL+NYLQVKAVVT+LKNPAWL
Sbjct: 510 KGIYSLNNYLQVKAVVTSLKNPAWL 534
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
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Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/547 (65%), Positives = 425/547 (77%), Gaps = 63/547 (11%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MAARR+ LLSRSF++SSP LF S+GR+ C +++AAAE+ I P
Sbjct: 1 MAARRVSSLLSRSFSASSPLLFRSQGRN---CYNGGI------LRRFGTSSAAAEEIINP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct: 52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAG
Sbjct: 112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAG------------------------------- 208
WADKI GLT PADG Y V TLHEPIGVAG
Sbjct: 172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 209 ----------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246
VLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291
Query: 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
YD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++
Sbjct: 352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQI 411
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+DEVI+R+N ++YGLAAGVFT
Sbjct: 412 GDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTK 471
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
NLDTAN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+NYLQ+KAVVTA
Sbjct: 472 NLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTA 531
Query: 487 LKNPAWL 493
L PAW+
Sbjct: 532 LNKPAWI 538
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
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Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/480 (52%), Positives = 311/480 (64%), Gaps = 54/480 (11%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF G P
Sbjct: 37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAG-------------------------------- 208
ADK G T P DG Y T HEP+GV G
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216
Query: 209 ---------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247
V+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
+FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S+YGLAA VFT +
Sbjct: 397 DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKD 456
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 457 LDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVTVKV 516
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Is capable of converting retinaldehyde to retinoic acid. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
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Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/496 (51%), Positives = 316/496 (63%), Gaps = 55/496 (11%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G S+A A P P +V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+
Sbjct: 17 GRRLLSAATQAVPTPNQQP-EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGD 75
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR AF G PW RM A ER +++ R ADL+ER +AALET DNGKP+
Sbjct: 76 KADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYI 135
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG------------ 208
S ++ M + RYYAGWADK G T P DG Y T HEP+GV G
Sbjct: 136 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQ 195
Query: 209 -----------------------------------------VLNIVSGYGPTAGAALASH 227
V+N++ G+GPTAGAA+ASH
Sbjct: 196 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASH 255
Query: 228 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 287
+VDK+AFTGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALF
Sbjct: 256 EDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 315
Query: 288 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347
FNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+L
Sbjct: 316 FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLG 375
Query: 348 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407
YI+SG + GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++E
Sbjct: 376 YIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEE 435
Query: 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 467
V+ R+N S+YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GR
Sbjct: 436 VVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGR 495
Query: 468 EKGSYSLSNYLQVKAV 483
E G Y L Y +VK V
Sbjct: 496 ELGEYGLQAYTEVKTV 511
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Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q66HF8|AL1B1_RAT Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/496 (50%), Positives = 320/496 (64%), Gaps = 55/496 (11%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G +T+ S AAA +PI P ++ Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 16 GRTTSYSTAAALPNPIPNP-EIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGD 74
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+ AV AAR+AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF+
Sbjct: 75 RADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQ 134
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG------------ 208
+S ++ +++RY AGWADK G T P DG + T HEP+GV G
Sbjct: 135 ESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQ 194
Query: 209 -----------------------------------------VLNIVSGYGPTAGAALASH 227
V+NI++GYGPTAGAA+A H
Sbjct: 195 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 254
Query: 228 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 287
M+VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD+D A + H ALF
Sbjct: 255 MDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALF 314
Query: 288 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347
FN GQCCCAGSRTFV ES+Y +F+E+ A KR VG+PF+ QQGPQ+D EQFEKIL
Sbjct: 315 FNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILG 374
Query: 348 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407
YIR G GAKL GGER G +G++IKPTVF V+DDM IA++EIFGPVQ + K+K ++E
Sbjct: 375 YIRLGQKEGAKLLCGGERFGERGFFIKPTVFGNVQDDMRIAREEIFGPVQPLFKFKKIEE 434
Query: 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 467
VIQR+N ++YGLAA VFT +LD A +AL+ G+VW+N +++ PFGG+K+SG GR
Sbjct: 435 VIQRANNTRYGLAAAVFTRDLDKALYFSQALQAGTVWVNTYNIVTCHTPFGGFKESGNGR 494
Query: 468 EKGSYSLSNYLQVKAV 483
E G L Y +VK V
Sbjct: 495 ELGEDGLKAYTEVKTV 510
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/492 (51%), Positives = 314/492 (63%), Gaps = 55/492 (11%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+++A +A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV
Sbjct: 1 SAAATSAVPAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDV 59
Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++AV AAR AF G PW RM A +R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 60 DKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYL 119
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG---------------- 208
++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 120 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179
Query: 209 -------------------------------------VLNIVSGYGPTAGAALASHMEVD 231
V+NIV G+GPTAGAA+ASH +VD
Sbjct: 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 239
Query: 232 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 291
K+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQG
Sbjct: 240 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 299
Query: 292 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351
QCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+S
Sbjct: 300 QCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKS 359
Query: 352 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411
G GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R
Sbjct: 360 GQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419
Query: 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 471
+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G
Sbjct: 420 ANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGE 479
Query: 472 YSLSNYLQVKAV 483
Y L Y +VK V
Sbjct: 480 YGLQAYTEVKTV 491
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Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/496 (51%), Positives = 315/496 (63%), Gaps = 55/496 (11%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+++A +A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV
Sbjct: 20 SAAATSAVPAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGNKEDV 78
Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++AV AA+ AF G PW RM A +R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 79 DKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYL 138
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG---------------- 208
++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 139 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 198
Query: 209 -------------------------------------VLNIVSGYGPTAGAALASHMEVD 231
V+NIV G+GPTAGAA+ASH +VD
Sbjct: 199 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 258
Query: 232 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 291
K+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQG
Sbjct: 259 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 318
Query: 292 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351
QCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+S
Sbjct: 319 QCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKS 378
Query: 352 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411
G GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R
Sbjct: 379 GQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGR 438
Query: 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 471
+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G
Sbjct: 439 ANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGE 498
Query: 472 YSLSNYLQVKAVVTAL 487
Y L Y +VK V +
Sbjct: 499 YGLQAYTEVKTVTVKV 514
|
Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/496 (51%), Positives = 315/496 (63%), Gaps = 55/496 (11%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+++A +A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV
Sbjct: 20 SAAATSAVPAPNHQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDV 78
Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++AV AAR AF G PW RM A +R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 79 DKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYL 138
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG---------------- 208
++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 139 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 198
Query: 209 -------------------------------------VLNIVSGYGPTAGAALASHMEVD 231
V+NIV G+GPTAGAA+ASH VD
Sbjct: 199 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVD 258
Query: 232 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 291
K+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQG
Sbjct: 259 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 318
Query: 292 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351
QCCCAGSRTFV E+VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+S
Sbjct: 319 QCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKS 378
Query: 352 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411
G GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R
Sbjct: 379 GQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGR 438
Query: 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 471
+N S+YGLAA VFT +LD AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G
Sbjct: 439 ANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGE 498
Query: 472 YSLSNYLQVKAVVTAL 487
Y L Y +VK V +
Sbjct: 499 YGLQAYTEVKTVTVKV 514
|
Is capable of converting retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/512 (49%), Positives = 317/512 (61%), Gaps = 54/512 (10%)
Query: 30 LCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR 89
+ RAAA G S+AA A +V Q+ IN ++ D+ S KTFPT++P
Sbjct: 1 MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS 60
Query: 90 TGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIA 148
TG+VI VAEG+ EDV++AV AAR AF G PW RM A R +++ R ADL+ER +A
Sbjct: 61 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA 120
Query: 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG 208
ALET DNGKP+ S ++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 121 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 180
Query: 209 -----------------------------------------------------VLNIVSG 215
V+NIV G
Sbjct: 181 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 240
Query: 216 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 275
+GPTAGAA+ASH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+
Sbjct: 241 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 300
Query: 276 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 335
D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGP
Sbjct: 301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 360
Query: 336 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGP 395
Q+D QF+KIL YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGP
Sbjct: 361 QVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGP 420
Query: 396 VQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI 455
V ILK+K ++EV+ R+N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A
Sbjct: 421 VMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS 480
Query: 456 PFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 481 PFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5R6B5|AL1B1_PONAB Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/496 (49%), Positives = 320/496 (64%), Gaps = 55/496 (11%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G + S+AAA PI P + Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 14 GRTARYSSAAALPSPILNP-DIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGD 72
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR+AF G PW RM A ER +++ ADL+ER +A+LET DNGKPF+
Sbjct: 73 RADVDRAVKAAREAFRLGSPWRRMDASERGRLLNCLADLVERDRVYLASLETLDNGKPFQ 132
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG------------ 208
+S ++ +++RY+AGWADK G T P DG + T HEPIGV G
Sbjct: 133 ESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPIGVCGQIIPWNFPLVMQ 192
Query: 209 -----------------------------------------VLNIVSGYGPTAGAALASH 227
V+NI++GYGPTAGAA+A H
Sbjct: 193 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 252
Query: 228 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 287
M+VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD++ A E H ALF
Sbjct: 253 MDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALF 312
Query: 288 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347
FN GQCCCAGSRTFV ES+Y++F+E+ A +R VG+PF+ QQGPQ+D EQFE++L
Sbjct: 313 FNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLG 372
Query: 348 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407
YI+ G GAKL GGER G +G++IKPTVF GV+DDM IAK+EIFGPVQ + K+K ++E
Sbjct: 373 YIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKMEE 432
Query: 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 467
VI+R+N ++YGLAA VFT +LD A +AL+ G+VW+N +++ PFGG+K+SG GR
Sbjct: 433 VIERANTTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGR 492
Query: 468 EKGSYSLSNYLQVKAV 483
E G L Y +VK V
Sbjct: 493 ELGEDGLKAYTEVKTV 508
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 493 | ||||||
| 224064707 | 540 | predicted protein [Populus trichocarpa] | 0.983 | 0.898 | 0.706 | 0.0 | |
| 356497822 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.977 | 0.895 | 0.695 | 0.0 | |
| 223452696 | 534 | mitochondrial benzaldehyde dehydrogenase | 0.975 | 0.900 | 0.701 | 0.0 | |
| 356501653 | 539 | PREDICTED: aldehyde dehydrogenase family | 0.971 | 0.888 | 0.696 | 0.0 | |
| 356567618 | 536 | PREDICTED: aldehyde dehydrogenase family | 0.912 | 0.839 | 0.727 | 0.0 | |
| 356526813 | 536 | PREDICTED: aldehyde dehydrogenase family | 0.912 | 0.839 | 0.721 | 0.0 | |
| 225424691 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.904 | 0.828 | 0.735 | 0.0 | |
| 297850852 | 534 | hypothetical protein ARALYDRAFT_472641 [ | 0.973 | 0.898 | 0.696 | 0.0 | |
| 225452510 | 535 | PREDICTED: aldehyde dehydrogenase family | 0.977 | 0.900 | 0.690 | 0.0 | |
| 449482989 | 540 | PREDICTED: aldehyde dehydrogenase family | 0.906 | 0.827 | 0.720 | 0.0 |
| >gi|224064707|ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|222843266|gb|EEE80813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/548 (70%), Positives = 433/548 (79%), Gaps = 63/548 (11%)
Query: 1 MAARRIPLLLSRSFTSSS--PTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPIT 58
MAA++I +LSRSF+S++ P FSR R S S ++ AA EDPIT
Sbjct: 1 MAAKKISTVLSRSFSSAAAPPCFFSRVR--------GGGGQSRLISRYNTTLAAVEDPIT 52
Query: 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
PPV V Y QLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+ EDVNRAVSAARKAFDE
Sbjct: 53 PPVSVKYNQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDVEDVNRAVSAARKAFDE 112
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
GPWPRMTAYERS+II RFADLLE+H DEIAALETWDNGKP+EQSA+ E+PMT R+FRYYA
Sbjct: 113 GPWPRMTAYERSRIIWRFADLLEKHTDEIAALETWDNGKPYEQSAKIEIPMTVRIFRYYA 172
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAG------------------------------ 208
GWADKI GLT PADGPYHVQTLHEPIGVAG
Sbjct: 173 GWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPMLMFSWKVGPALACGNTVVIKT 232
Query: 209 -----------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245
VLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIV
Sbjct: 233 AEQTPLSAVYAAKLFHEAGLPDGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIV 292
Query: 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 305
L+LA+KSNLKPVTLELGGKSPFIVCEDADVD+A EL+H A+FFNQGQCCCAGSRTFVHE
Sbjct: 293 LELASKSNLKPVTLELGGKSPFIVCEDADVDQAVELSHSAVFFNQGQCCCAGSRTFVHER 352
Query: 306 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 365
VYD+FVEKA A A +R VGDPFK GI+QGPQ+DS+QFEKIL+ IRSGV+ GA L+ GG+R
Sbjct: 353 VYDEFVEKAKARANQRAVGDPFKEGIEQGPQVDSDQFEKILRIIRSGVESGANLKAGGDR 412
Query: 366 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425
G GYYI+PTVF+ V+DDMLIAK+EIFGPVQSI K+KDLDEVIQRSN S+YGLAAG+FT
Sbjct: 413 FGTTGYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNNSRYGLAAGIFT 472
Query: 426 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
HNLDTANTL RAL+VG+VWINC+DVFDAAIPFGGYK SG GREKG YSL+NYLQVKAVVT
Sbjct: 473 HNLDTANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQVKAVVT 532
Query: 486 ALKNPAWL 493
+LKNPAWL
Sbjct: 533 SLKNPAWL 540
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/546 (69%), Positives = 434/546 (79%), Gaps = 64/546 (11%)
Query: 2 AARRIPLLLSRSFTSSSPT-LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
++ RI LLSRSF S+S T LFSR + A + S AAA E+PI PP
Sbjct: 3 SSMRISRLLSRSFLSASTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPP 52
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
VKV++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GP
Sbjct: 53 VKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDHGP 112
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+MTAYER +I+LR ADL E+HNDE+AALETWDNGKP+EQSAQ E+PM RLFRYYAGW
Sbjct: 113 WPKMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGW 172
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAG-------------------------------- 208
ADKI GLT PADGPYHVQTLHEPIGVAG
Sbjct: 173 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAE 232
Query: 209 ---------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247
VLN++SG+GPTAGAA+ASHM++DKLAFTGST TGK+VL+
Sbjct: 233 QTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLE 292
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 293 LAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVY 352
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
D+F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G
Sbjct: 353 DEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFG 412
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
G+YI+PTVF+ VKDDMLIAK+EIFGPVQ+ILK+KDLD+VIQR+N + YGLAAGVFT N
Sbjct: 413 NSGFYIQPTVFSNVKDDMLIAKEEIFGPVQTILKFKDLDDVIQRANNTHYGLAAGVFTKN 472
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
++TANTL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG YSL NYLQVKAVVT+L
Sbjct: 473 INTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSL 532
Query: 488 KNPAWL 493
KNPAWL
Sbjct: 533 KNPAWL 538
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223452696|gb|ACM89738.1| mitochondrial benzaldehyde dehydrogenase [Antirrhinum majus] | Back alignment and taxonomy information |
|---|
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/546 (70%), Positives = 426/546 (78%), Gaps = 65/546 (11%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
MAA R LLSRS P L G+ S L R Y ++AAAA E+PI PP
Sbjct: 1 MAAHRFSSLLSRSV----PLLSRGGKQSYLGRGV--------YRYGTAAAAALEEPIKPP 48
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
V V Y +LLINGQFVD+ASGKTFPTLDPR+G+VI HVAEG+AED+NRAV+AARKAFDEGP
Sbjct: 49 VSVQYDKLLINGQFVDAASGKTFPTLDPRSGEVIAHVAEGDAEDINRAVAAARKAFDEGP 108
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+M AYER KI+LRFADL+E+HNDE+AALE WD+GKP+EQ AQ E+PM RLFRYYAGW
Sbjct: 109 WPKMPAYERQKIMLRFADLVEKHNDEVAALEAWDSGKPYEQCAQVEIPMFVRLFRYYAGW 168
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAG-------------------------------- 208
ADKI GLT PADGP+HVQTLHEPIGVAG
Sbjct: 169 ADKIHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLVMFGWKVGPALACGNSVVLKTAE 228
Query: 209 ---------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247
VLNIVSG+GPTAGAAL HM+VDKLAFTGST TGKIVL+
Sbjct: 229 QTPLSALLVSKLFHEAGLPEGVLNIVSGFGPTAGAALCRHMDVDKLAFTGSTETGKIVLE 288
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
L+AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 289 LSAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHEKVY 348
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
D+FVEKA A A+KR VGDPFK G++QGPQ+D++QFEKILKYIRSG + GA LETGG+RLG
Sbjct: 349 DEFVEKAKARALKRTVGDPFKAGMEQGPQVDADQFEKILKYIRSGAESGATLETGGDRLG 408
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
KGYYI+PTVF+ VKDDMLIAKDEIFGPVQ+ILK+K+LDEVI+R+N S YGLAAGVFT N
Sbjct: 409 TKGYYIQPTVFSDVKDDMLIAKDEIFGPVQTILKFKELDEVIRRANNSSYGLAAGVFTQN 468
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
LDTANT+MRALR G+VWINCFD FDAAIPFGGYK SG GREKG YSL NYLQVKAVVTAL
Sbjct: 469 LDTANTMMRALRAGTVWINCFDTFDAAIPFGGYKMSGIGREKGEYSLKNYLQVKAVVTAL 528
Query: 488 KNPAWL 493
KNPAWL
Sbjct: 529 KNPAWL 534
|
Source: Antirrhinum majus Species: Antirrhinum majus Genus: Antirrhinum Family: Plantaginaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501653|ref|XP_003519638.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/544 (69%), Positives = 431/544 (79%), Gaps = 65/544 (11%)
Query: 5 RIPLLLSRSFTSSSPT--LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVK 62
RI LLSRSF S+S T LFSR + A + S AAA E+PI PP+K
Sbjct: 6 RISRLLSRSFLSASTTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPPLK 55
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
V++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GPWP
Sbjct: 56 VEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDRGPWP 115
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
+MTAYER +I+LR ADL E+HND++AALETWDNGKP+EQSAQ E+PM RLFRYYAGWAD
Sbjct: 116 KMTAYERQRILLRAADLFEKHNDDLAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWAD 175
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAG---------------------------------- 208
KI GLT PADGPYHVQTLHEPIGVAG
Sbjct: 176 KIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQT 235
Query: 209 -------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
VLNI+SG+GPTAGAA+ASHM++DKLAFTGST TGKIVL+LA
Sbjct: 236 PLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAFTGSTETGKIVLELA 295
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+
Sbjct: 296 ARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDE 355
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G
Sbjct: 356 FIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNS 415
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
G+YI+PTVF+ VKDDMLIAK+EIFGPVQSILK+KDLD+VIQR+N + YGLAAGVFT N++
Sbjct: 416 GFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDLDDVIQRANNTHYGLAAGVFTKNIN 475
Query: 430 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 489
TANTL RALR G+VW+NCFD FDAAIPFGGYK SGQGREKG YSL NYLQVKAVVT+LKN
Sbjct: 476 TANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKN 535
Query: 490 PAWL 493
PAWL
Sbjct: 536 PAWL 539
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567618|ref|XP_003552014.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/506 (72%), Positives = 414/506 (81%), Gaps = 56/506 (11%)
Query: 41 CGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
C YST+S A E+P+ P V+V++TQLLI+G+FVD+ASGKTFPTLDPRTG+VI HVAEG
Sbjct: 34 CKYSTSS---AIEEEPVKPSVQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEG 90
Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
+EDV+RAV+AARKAFD GPWP+MTAYER +I+LR ADLLE+HNDE+AALETWDNGKP+E
Sbjct: 91 HSEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYE 150
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG------------ 208
Q+A+ EVPM RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAG
Sbjct: 151 QAAKIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 210
Query: 209 -----------------------------------------VLNIVSGYGPTAGAALASH 227
VLN+VSG+GPTAGAALASH
Sbjct: 211 AWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASH 270
Query: 228 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 287
MEVDKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALF
Sbjct: 271 MEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALF 330
Query: 288 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347
FNQGQCCCAGSRTFVHESVYD+FVEKA A A+KRVVGDPFKGGI+QGPQIDS+QFEKIL+
Sbjct: 331 FNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILR 390
Query: 348 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407
YIRSGV+ GA LETGG++LG KG+YI+PTVF+ VKD MLIA+DEIFGPVQSILK+KDL E
Sbjct: 391 YIRSGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIARDEIFGPVQSILKFKDLGE 450
Query: 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 467
V+QR+N ++YGLAAGVFT N+DTA TL RALRVG+VWINCFD FDAAIPFGGYK SGQGR
Sbjct: 451 VVQRANNTRYGLAAGVFTTNMDTAYTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGR 510
Query: 468 EKGSYSLSNYLQVKAVVTALKNPAWL 493
EKG YSL NYLQVKAVV LKNPAWL
Sbjct: 511 EKGEYSLKNYLQVKAVVNPLKNPAWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526813|ref|XP_003532011.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/503 (72%), Positives = 413/503 (82%), Gaps = 53/503 (10%)
Query: 44 STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
S S++AA E+PI P ++V++TQLLI+G+FVD+ASGKTF TLDPRTG+VI HVAEG +E
Sbjct: 34 SKFSTSAAIEEEPIKPSIQVEHTQLLIDGKFVDAASGKTFQTLDPRTGEVIAHVAEGHSE 93
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV+RAVSAARKAFD GPWP+MTAYER +I+LR ADL+E+HNDE+AALETWDNGKP+EQ+A
Sbjct: 94 DVDRAVSAARKAFDHGPWPKMTAYERQRILLRVADLIEKHNDELAALETWDNGKPYEQAA 153
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG--------------- 208
+ EVPM RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAG
Sbjct: 154 KIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 213
Query: 209 --------------------------------------VLNIVSGYGPTAGAALASHMEV 230
VLN+VSG+GPTAGAALASHMEV
Sbjct: 214 VGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEV 273
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
DKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQ
Sbjct: 274 DKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQ 333
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350
GQCCCAGSRTFVHE+VY++FV+KA A A++RVVGDPFKGGI+QGPQIDS+QFEKIL+YIR
Sbjct: 334 GQCCCAGSRTFVHENVYEEFVQKAKARALRRVVGDPFKGGIEQGPQIDSDQFEKILRYIR 393
Query: 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
SGV+ GA LETGG++LG KG+YI+PTVF+ VKD MLIAKDEIFGPVQSILK+KDL EV+Q
Sbjct: 394 SGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIAKDEIFGPVQSILKFKDLGEVVQ 453
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 470
R+N ++YGLAAGVFT N+DTANTL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG
Sbjct: 454 RANNTRYGLAAGVFTKNMDTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKG 513
Query: 471 SYSLSNYLQVKAVVTALKNPAWL 493
YSL NYLQVKAVV LKNPAWL
Sbjct: 514 EYSLKNYLQVKAVVNPLKNPAWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424691|ref|XP_002263479.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296086543|emb|CBI32132.3| unnamed protein product [Vitis vinifera] gi|426204222|gb|AFY12671.1| mitochondrial aldehyde dehydrogenase 2B8 [Vitis quinquangularis] | Back alignment and taxonomy information |
|---|
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/499 (73%), Positives = 407/499 (81%), Gaps = 53/499 (10%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S AA E+PI P V V+YTQLLINGQFVD+A+GKTF TLDPRTG+VI VAEG+AEDVNR
Sbjct: 40 STAAVVEEPINPSVNVNYTQLLINGQFVDAATGKTFETLDPRTGNVIASVAEGDAEDVNR 99
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AVSAARKAFDEGPWPRM+ YERSKI+LRFADLLE+HNDEIAALETWDNGKPFEQ+A+ EV
Sbjct: 100 AVSAARKAFDEGPWPRMSPYERSKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEV 159
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG------------------- 208
P+ RL RYYAGWADKI GLT PADG + VQTLHEPIGVAG
Sbjct: 160 PLVIRLMRYYAGWADKIHGLTVPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPA 219
Query: 209 ----------------------------------VLNIVSGYGPTAGAALASHMEVDKLA 234
VLN+VSGYGPTAGAALASHM+VDKLA
Sbjct: 220 LACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLA 279
Query: 235 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 294
FTGST TGKIVLQLAA+SNLKPVTLELGGKSPFIVCEDA+VD+A ELAH+ALFFNQGQCC
Sbjct: 280 FTGSTATGKIVLQLAARSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCC 339
Query: 295 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 354
CAGSRTFVHES+YD+FVEKA A A++R VGDPFK GI+QGPQIDS+QFEKIL+YIRSGV+
Sbjct: 340 CAGSRTFVHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVE 399
Query: 355 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 414
GA LETGGER G +G++IKPTVF+ V+D MLIA+DEIFGPVQSILK+KDL EVI+R+NA
Sbjct: 400 NGATLETGGERFGKEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLGEVIRRANA 459
Query: 415 SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSL 474
+ YGLAAGVFT NLDTANTL RAL+VG+VWINCFDVFDAAIPFGGYK SG GREKG YSL
Sbjct: 460 TSYGLAAGVFTQNLDTANTLTRALKVGTVWINCFDVFDAAIPFGGYKMSGHGREKGIYSL 519
Query: 475 SNYLQVKAVVTALKNPAWL 493
NYLQVKAV+T LKNPAWL
Sbjct: 520 QNYLQVKAVITPLKNPAWL 538
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850852|ref|XP_002893307.1| hypothetical protein ARALYDRAFT_472641 [Arabidopsis lyrata subsp. lyrata] gi|297339149|gb|EFH69566.1| hypothetical protein ARALYDRAFT_472641 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/547 (69%), Positives = 432/547 (78%), Gaps = 67/547 (12%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFS-RGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MA+RR+ LLSRSF SSSP+LFS RG + G S+AAAA E+ ITP
Sbjct: 1 MASRRVSSLLSRSFMSSSPSLFSLRGMNR-------------GAQRYSNAAAAVENTITP 47
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI VAEG+AEDVNRAV+AARKAFDEG
Sbjct: 48 PVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVAEGDAEDVNRAVAAARKAFDEG 107
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWPRMTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQS Q EVPM R+FRYYAG
Sbjct: 108 PWPRMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSVQIEVPMLARVFRYYAG 167
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAG------------------------------- 208
WADKI G+T P DGP+HVQTLHEPIGVAG
Sbjct: 168 WADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTIVLKTA 227
Query: 209 ----------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246
V+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L
Sbjct: 228 EQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIIL 287
Query: 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 288 ELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERV 347
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
YD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF+KILKYI+ GV+ GA L+ GG+RL
Sbjct: 348 YDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFKKILKYIKYGVEAGATLQAGGDRL 407
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
G+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEVI R+N S+YGLAAGVFT
Sbjct: 408 GSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQ 467
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
NLDTA+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GREKG YSL+NYLQVKAVVT+
Sbjct: 468 NLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGLYSLNNYLQVKAVVTS 527
Query: 487 LKNPAWL 493
LKNPAWL
Sbjct: 528 LKNPAWL 534
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452510|ref|XP_002274863.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296087691|emb|CBI34947.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/546 (69%), Positives = 425/546 (77%), Gaps = 64/546 (11%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
MAA RI LLS S T++S L S GR S R G S S+A A E+PITPP
Sbjct: 1 MAAPRIFSLLSASSTAAS--LRSFGRYSRWGR---------GSSRFSTAVATEEEPITPP 49
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
V++DYTQLLING+FVD+ASGKTFPTLDPRTGDVI HVAEGEAED+NRAVSAARKAFDEGP
Sbjct: 50 VQIDYTQLLINGRFVDAASGKTFPTLDPRTGDVIAHVAEGEAEDINRAVSAARKAFDEGP 109
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+MT YERS I+ RFADLLE+H EIAALE+WDNGKP+EQ+A E+PM R+FRYYAGW
Sbjct: 110 WPKMTPYERSCILFRFADLLEKHCSEIAALESWDNGKPYEQAANVEIPMVIRVFRYYAGW 169
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAG-------------------------------- 208
ADKI GLT PADG +HVQTLHEPIGVAG
Sbjct: 170 ADKIHGLTVPADGLHHVQTLHEPIGVAGQIIPWNFPLLLYGWKVGPALACGNTIVLKTAE 229
Query: 209 ---------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247
VLN+VSG+GPTAGAAL+SHM+VDKLAFTGST TGKIVL
Sbjct: 230 QTPLSALYASKLLYEAGLPPGVLNVVSGFGPTAGAALSSHMDVDKLAFTGSTGTGKIVLG 289
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
LAAKSNLKPVTLELGGKSPFIVCEDADVDKA EL+H ALF+NQGQ CC+GSRTFVHES+Y
Sbjct: 290 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELSHTALFYNQGQSCCSGSRTFVHESIY 349
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
D+F+EKA A A+KRVVGDPFK G++QGPQIDS+QF KIL YI+SG++ GA LE GGE+
Sbjct: 350 DEFIEKAKARALKRVVGDPFKKGVEQGPQIDSQQFNKILGYIKSGIEAGATLEAGGEKFS 409
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+KGYYI+PTVF+ V D+MLIAK+EIFGPVQSILK+KDLDEVI+R+NA+ YGLAAG+FT N
Sbjct: 410 SKGYYIQPTVFSNVHDNMLIAKEEIFGPVQSILKFKDLDEVIRRANATHYGLAAGIFTQN 469
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
LDTANTL RALRVG+VWINCF VFDAAIPFGG K SG GREKG Y LSNY+QVKAVVT L
Sbjct: 470 LDTANTLTRALRVGTVWINCFFVFDAAIPFGGRKMSGHGREKGIYGLSNYMQVKAVVTPL 529
Query: 488 KNPAWL 493
KNPAWL
Sbjct: 530 KNPAWL 535
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449482989|ref|XP_004156463.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/504 (72%), Positives = 407/504 (80%), Gaps = 57/504 (11%)
Query: 43 YSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEA 102
YSTAS A EDPITP VKV+Y QLLINGQFVDS SGKTFPTLDPRTG+VI VAEG+A
Sbjct: 41 YSTAS----AVEDPITPSVKVNYNQLLINGQFVDSVSGKTFPTLDPRTGEVIAEVAEGDA 96
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
D++ AVSAARKAFDEGPWP+MTAYERSKI+LRFADL+E+H +E+AALETWDNGK +EQS
Sbjct: 97 RDIDIAVSAARKAFDEGPWPKMTAYERSKIMLRFADLVEKHAEEVAALETWDNGKTYEQS 156
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG-------------- 208
+ E+PM RLFRYY GWADKI GLT PADG YHVQTLHEPIGVAG
Sbjct: 157 LKIEIPMFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLVMFAW 216
Query: 209 ---------------------------------------VLNIVSGYGPTAGAALASHME 229
VLNIVSGYGPTAGAALASHME
Sbjct: 217 KVGPALACGNTIVLKTAEQTPLSALLVAKLFHEAGLPEGVLNIVSGYGPTAGAALASHME 276
Query: 230 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 289
VDKLAFTGST TGK+VL+LA+KSNLKPVTLELGGKSPFIVCEDADVDKA E+AH+ALFFN
Sbjct: 277 VDKLAFTGSTETGKVVLELASKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFN 336
Query: 290 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 349
QGQCCCAGSRTFVHE V+D+FVEKA A RVVGDPF GGI+QGPQ+D+EQF+KILKYI
Sbjct: 337 QGQCCCAGSRTFVHEKVHDEFVEKARNRAANRVVGDPFLGGIEQGPQVDAEQFKKILKYI 396
Query: 350 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409
+ G++GGA LE GG+R G+KGYY++PTVF+ VKDDM IA+DEIFGPVQ+ILKYKD+DEVI
Sbjct: 397 KYGIEGGATLEAGGDRFGSKGYYVQPTVFSNVKDDMKIAEDEIFGPVQTILKYKDIDEVI 456
Query: 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 469
+R+NAS+YGLAAGVFT N++TAN L R+LRVGSVWINCFDVFDAA+PFGGYK SG GREK
Sbjct: 457 RRANASRYGLAAGVFTQNINTANRLTRSLRVGSVWINCFDVFDAAVPFGGYKMSGHGREK 516
Query: 470 GSYSLSNYLQVKAVVTALKNPAWL 493
G YSLSNYLQVKAVVT L+NPAWL
Sbjct: 517 GIYSLSNYLQVKAVVTPLENPAWL 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 493 | ||||||
| MGI|MGI:99600 | 519 | Aldh2 "aldehyde dehydrogenase | 0.559 | 0.531 | 0.634 | 2.3e-129 | |
| UNIPROTKB|E1BT93 | 519 | ALDH2 "Uncharacterized protein | 0.596 | 0.566 | 0.568 | 4.3e-128 | |
| UNIPROTKB|F1ST54 | 517 | ALDH1B1 "Uncharacterized prote | 0.584 | 0.557 | 0.567 | 7.1e-126 | |
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 0.596 | 0.550 | 0.795 | 1.6e-125 | |
| UNIPROTKB|O94788 | 518 | ALDH1A2 "Retinal dehydrogenase | 0.567 | 0.540 | 0.578 | 2.4e-123 | |
| TAIR|locus:505006369 | 501 | ALDH2C4 "AT3G24503" [Arabidops | 0.596 | 0.586 | 0.528 | 6.5e-123 | |
| UNIPROTKB|F1PGT3 | 518 | ALDH1A2 "Uncharacterized prote | 0.567 | 0.540 | 0.575 | 1.3e-122 | |
| WB|WBGene00000107 | 510 | alh-1 [Caenorhabditis elegans | 0.584 | 0.564 | 0.553 | 2.2e-122 | |
| UNIPROTKB|P00352 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.592 | 0.582 | 0.566 | 3.5e-122 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.580 | 0.531 | 0.772 | 4e-122 |
| MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 905 (323.6 bits), Expect = 2.3e-129, Sum P(2) = 2.3e-129
Identities = 175/276 (63%), Positives = 209/276 (75%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267
GV+NIV G+GPTAGAA+ASH VDK+AFTGST G ++ A SNLK VTLELGGKSP
Sbjct: 235 GVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPN 294
Query: 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327
I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E+VYD+FVE++ A A RVVG+PF
Sbjct: 295 IIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPF 354
Query: 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 387
+QGPQ+D QF+KIL YI+SG GAKL GG +GY+I+PTVF VKD M I
Sbjct: 355 DSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTI 414
Query: 388 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 447
AK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD AN L +AL+ G+VWINC
Sbjct: 415 AKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINC 474
Query: 448 FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 475 YDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 510
|
|
| UNIPROTKB|E1BT93 ALDH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 892 (319.1 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
Identities = 167/294 (56%), Positives = 219/294 (74%)
Query: 190 PADGPYHVQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
P Y + E GV+NI+ GYGPTAGAA+++HM+VDK+AFTGST G ++ + A
Sbjct: 217 PLSALYVANLIKEAGFPPGVVNIIPGYGPTAGAAISAHMDVDKVAFTGSTEVGHLIKKAA 276
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A+SNLK VTLELGGKSP I+ DAD+D A + AH+ALFFNQGQCCCAGSRT+V E +Y++
Sbjct: 277 AESNLKRVTLELGGKSPNIIMSDADMDWAVDQAHFALFFNQGQCCCAGSRTYVQEDIYNE 336
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
FVE++ A RVVG+PF +QGPQ+D EQF+KIL YI +G GAKL GG +
Sbjct: 337 FVERSVEKAKSRVVGNPFDFKTEQGPQVDEEQFKKILGYISTGKREGAKLLCGGNPAADR 396
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
GY+++PTVF V+D+M IA++EIFGPV I+K+K ++E+I+R+N S+YGLAA VFT ++D
Sbjct: 397 GYFVQPTVFGDVQDNMTIAREEIFGPVMQIMKFKTIEEIIERANNSKYGLAAAVFTKDID 456
Query: 430 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
AN + +ALR G+VW+NC++VF A PFGGYK SG GRE G Y L YL+VK V
Sbjct: 457 KANYVSQALRAGTVWVNCYNVFGAQAPFGGYKASGNGRELGEYGLEAYLEVKNV 510
|
|
| UNIPROTKB|F1ST54 ALDH1B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 861 (308.1 bits), Expect = 7.1e-126, Sum P(2) = 7.1e-126
Identities = 164/289 (56%), Positives = 215/289 (74%)
Query: 196 HVQTLHEPIGVA-GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
++ +L + +G GV+NI++GYGPTAG A+A HM+V+K+AFTGST G ++ + A SNL
Sbjct: 220 YLASLIKEVGFPPGVVNILTGYGPTAGTAIAHHMDVNKVAFTGSTEVGHLIQKAAGDSNL 279
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
K VTLELGGKSP IV DAD+D A E H ALFFN GQCCCAGSRTFV ES+YD+F+E+
Sbjct: 280 KRVTLELGGKSPSIVLADADMDHAVEQCHEALFFNMGQCCCAGSRTFVEESIYDEFLERT 339
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 374
A +R VG+PF+ QQGPQ++ EQFE+IL YI+ G GAKL GGER G +G++IK
Sbjct: 340 VEKAKRRKVGNPFELDTQQGPQVNKEQFERILGYIQLGQKEGAKLLCGGERFGERGFFIK 399
Query: 375 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 434
PTVF GV+DDM IAK+EIFGPVQ + K+K ++EVI+R+N ++YGLAA VFT +LD A
Sbjct: 400 PTVFGGVQDDMRIAKEEIFGPVQPLFKFKRIEEVIERANNTRYGLAAAVFTQDLDKAMYF 459
Query: 435 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+AL+ G+VW+N +++ PFGG+K+SG GRE G L Y +VK V
Sbjct: 460 TQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTV 508
|
|
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1233 (439.1 bits), Expect = 1.6e-125, P = 1.6e-125
Identities = 234/294 (79%), Positives = 264/294 (89%)
Query: 200 LHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 259
LHE GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L+LA+KSNLK VTL
Sbjct: 241 LHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELASKSNLKAVTL 300
Query: 260 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 319
ELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+FVEKA A A+
Sbjct: 301 ELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARAL 360
Query: 320 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT 379
KR VGDPFK GI+QGPQ+DSEQF KILKYI+ GV+ GA L+ GG+RLG+KGYYI+PTVF+
Sbjct: 361 KRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGSKGYYIQPTVFS 420
Query: 380 GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 439
VKDDMLIA DEIFGPVQ+ILK+KDLDEVI R+N S+YGLAAGVFT NLDTA+ LMRALR
Sbjct: 421 DVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDTAHRLMRALR 480
Query: 440 VGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 493
VG+VWINCFDV DA+IPFGGYK SG GREKG YSL+NYLQVKAVVT+LKNPAWL
Sbjct: 481 VGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTSLKNPAWL 534
|
|
| UNIPROTKB|O94788 ALDH1A2 "Retinal dehydrogenase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 872 (312.0 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 162/280 (57%), Positives = 213/280 (76%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267
GV+NI+ GYGPTAGAA+ASH+ +DK+AFTGST GK++ + A +SNLK VTLELGGKSP
Sbjct: 234 GVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPN 293
Query: 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327
I+ DAD+D A E AH +FFNQGQCC AGSR FV ES+Y++FV ++ A +RVVG PF
Sbjct: 294 IIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPF 353
Query: 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 387
+QGPQID +Q+ KIL+ I+SGV GAKLE GG+ LG KG++I+PTVF+ V DDM I
Sbjct: 354 DPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 413
Query: 388 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 447
AK+EIFGPVQ IL++K +DEVI+R+N S +GL A VFT++++ A T+ A++ G+VWINC
Sbjct: 414 AKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINC 473
Query: 448 FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
++ +A PFGG+K SG GRE G + L Y +VK V +
Sbjct: 474 YNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKI 513
|
|
| TAIR|locus:505006369 ALDH2C4 "AT3G24503" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 830 (297.2 bits), Expect = 6.5e-123, Sum P(2) = 6.5e-123
Identities = 156/295 (52%), Positives = 211/295 (71%)
Query: 200 LHEPIGVA-GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVT 258
L + G+ GVLNIV+G+G TAGAA+ASHM+VDK++FTGST G+ ++Q AA SNLK V+
Sbjct: 207 LSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVS 266
Query: 259 LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 318
LELGGKSP ++ DAD+DKAA+LA F+N+G+ C A SR FV E +YD+ VEK A
Sbjct: 267 LELGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKA 326
Query: 319 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF 378
VGDPF +QGPQ+D QFEKIL YI G + GA L TGG+ +G KGY+I+PT+F
Sbjct: 327 KDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIF 386
Query: 379 TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 438
V +DM I +DEIFGPV S++K+K ++E I+ +N ++YGLAAG+ + ++D NT+ R++
Sbjct: 387 ADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSI 446
Query: 439 RVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 493
+ G +W+NC+ FD P+GGYK SG RE G +L NYLQ K+VV L N W+
Sbjct: 447 KAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501
|
|
| UNIPROTKB|F1PGT3 ALDH1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 871 (311.7 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 161/280 (57%), Positives = 213/280 (76%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267
GV+NI+ GYGPTAGAA+ASH+ +DK+AFTGST GK++ + A +SNLK VTLELGGKSP
Sbjct: 234 GVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPN 293
Query: 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327
I+ DAD+D A E AH +FFNQGQCC AGSR FV ES+Y++FV ++ A +R+VG PF
Sbjct: 294 IIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPF 353
Query: 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 387
+QGPQID +Q+ KIL+ I+SGV GAKLE GG+ LG KG++I+PTVF+ V DDM I
Sbjct: 354 DPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 413
Query: 388 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 447
AK+EIFGPVQ IL++K +DEVI+R+N S +GL A VFT++++ A T+ A++ G+VWINC
Sbjct: 414 AKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINC 473
Query: 448 FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
++ +A PFGG+K SG GRE G + L Y +VK V +
Sbjct: 474 YNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKI 513
|
|
| WB|WBGene00000107 alh-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 860 (307.8 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 160/289 (55%), Positives = 214/289 (74%)
Query: 196 HVQTLHEPIGVA-GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
HV L + G GV+NI+ GYG TAG A++SHM+VDK+AFTGST G++V++ AA+SN+
Sbjct: 213 HVAALTKEAGFPDGVVNIIPGYGHTAGQAISSHMDVDKVAFTGSTEVGRLVMKAAAESNV 272
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
K VTLELGGKSP I+ DAD++ + A++ LFFNQGQCCCAGSRTFV +YD FV ++
Sbjct: 273 KKVTLELGGKSPNIIFADADLNDSVHQANHGLFFNQGQCCCAGSRTFVEGKIYDDFVARS 332
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 374
LA K V+GDPF QGPQ+D +Q E ILKYI +G GA+L TGG + G +G+++K
Sbjct: 333 KELAEKAVIGDPFDLKTTQGPQVDGKQVETILKYIAAGKKDGAQLVTGGAKHGDQGHFVK 392
Query: 375 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 434
PT+F VKD M IA++EIFGPV +I+++ ++E+++++N + YGLAAGV T ++D A +
Sbjct: 393 PTIFANVKDQMTIAQEEIFGPVMTIIRFDTMEELVEKANNTIYGLAAGVMTKDIDKALHI 452
Query: 435 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
A R GSVW+NC+DVFDAA PFGG+KQSG GRE G Y L Y +VK V
Sbjct: 453 ANATRAGSVWVNCYDVFDAAAPFGGFKQSGIGRELGEYGLEAYTEVKTV 501
|
|
| UNIPROTKB|P00352 ALDH1A1 "Retinal dehydrogenase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 882 (315.5 bits), Expect = 3.5e-122, Sum P(2) = 3.5e-122
Identities = 166/293 (56%), Positives = 215/293 (73%)
Query: 196 HVQTLHEPIGVA-GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
HV +L + G GV+NIV GYGPTAGAA++SHM++DK+AFTGST GK++ + A KSNL
Sbjct: 204 HVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNL 263
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
K VTLELGGKSP IV DAD+D A E AH+ +F++QGQCC A SR FV ES+YD+FV ++
Sbjct: 264 KRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRS 323
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 374
A K ++G+P G+ QGPQID EQ++KIL I SG GAKLE GG G KGY+++
Sbjct: 324 VERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQ 383
Query: 375 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 434
PTVF+ V D+M IAK+EIFGPVQ I+K+K LD+VI+R+N + YGL+AGVFT ++D A T+
Sbjct: 384 PTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITI 443
Query: 435 MRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
AL+ G+VW+NC+ V A PFGG+K SG GRE G Y Y +VK V +
Sbjct: 444 SSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
Identities = 221/286 (77%), Positives = 258/286 (90%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267
GVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L LAA SNLKPVTLELGGKSPF
Sbjct: 253 GVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTLELGGKSPF 312
Query: 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327
IV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE VYD+FVEK+ A A+KRVVGDPF
Sbjct: 313 IVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARALKRVVGDPF 372
Query: 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 387
+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++G KGY+I+PTVF+ VKDDMLI
Sbjct: 373 RKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPTVFSNVKDDMLI 432
Query: 388 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 447
A+DEIFGPVQSILK+ D+DEVI+R+N ++YGLAAGVFT NLDTAN + RAL+ G+VW+NC
Sbjct: 433 AQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNC 492
Query: 448 FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 493
FDVFDAAIPFGGYK SG GREKG YSL+NYLQ+KAVVTAL PAW+
Sbjct: 493 FDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKPAWI 538
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.4409 | 0.8620 | 0.8551 | yes | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.4516 | 0.8559 | 0.8525 | yes | no |
| P47738 | ALDH2_MOUSE | 1, ., 2, ., 1, ., 3 | 0.5120 | 0.8945 | 0.8497 | yes | no |
| Q8S528 | AL2B7_ARATH | 1, ., 2, ., 1, ., 3 | 0.7128 | 0.9168 | 0.8464 | yes | no |
| P81178 | ALDH2_MESAU | 1, ., 2, ., 1, ., 3 | 0.5162 | 0.8864 | 0.874 | N/A | no |
| P46367 | ALDH4_YEAST | 1, ., 2, ., 1, ., 3 | 0.4186 | 0.8722 | 0.8285 | yes | no |
| Q5R6B5 | AL1B1_PONAB | 1, ., 2, ., 1, ., 3 | 0.4959 | 0.8945 | 0.8529 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.4668 | 0.8559 | 0.8490 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.4338 | 0.8640 | 0.8469 | yes | no |
| P20000 | ALDH2_BOVIN | 1, ., 2, ., 1, ., 3 | 0.5141 | 0.8945 | 0.8480 | yes | no |
| P05091 | ALDH2_HUMAN | 1, ., 2, ., 1, ., 3 | 0.4980 | 0.9290 | 0.8858 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.5270 | 0.8640 | 0.8176 | yes | no |
| Q66HF8 | AL1B1_RAT | 1, ., 2, ., 1, ., 3 | 0.5020 | 0.8945 | 0.8497 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1.3 | 0.991 |
| 3rd Layer | 1.2.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 493 | |||
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-180 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-170 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-167 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-166 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-160 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-159 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-155 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-152 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-148 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-145 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-143 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-141 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-139 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-138 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-136 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-136 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-134 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-132 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-132 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-127 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-126 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-125 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-121 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-121 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-119 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-117 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-117 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-117 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-113 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-112 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-112 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-111 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-109 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-107 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-105 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-102 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 4e-99 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 5e-99 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 3e-98 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 2e-97 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 2e-97 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 7e-96 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 4e-94 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-92 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 9e-90 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 5e-89 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-88 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 2e-87 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 7e-87 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 4e-85 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 8e-85 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 5e-84 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-81 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 4e-81 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 3e-80 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 5e-79 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 2e-75 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 7e-75 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 4e-73 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 4e-73 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 6e-73 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-72 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 4e-72 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 3e-70 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 1e-64 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 4e-63 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-59 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 3e-59 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 8e-55 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-54 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 1e-51 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-50 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 4e-49 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 8e-49 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-48 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 2e-47 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 5e-47 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-46 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 5e-46 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 7e-45 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 1e-44 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-42 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 3e-42 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 4e-42 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-41 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 3e-40 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 7e-40 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 4e-37 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 3e-36 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 6e-34 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 6e-34 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 2e-31 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-30 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 1e-28 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 6e-28 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 1e-27 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 3e-27 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 4e-22 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 8e-21 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 3e-20 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-19 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-16 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-16 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 7e-15 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-14 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 4e-14 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 1e-12 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 2e-12 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 3e-12 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-11 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 9e-11 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 3e-10 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-09 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-09 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 8e-09 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 2e-08 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 8e-08 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 9e-06 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 8e-05 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 2e-04 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 5e-04 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 929 bits (2404), Expect = 0.0
Identities = 399/547 (72%), Positives = 444/547 (81%), Gaps = 63/547 (11%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MAARRI LLSRS ++SS L SRGR+ R G S+AAAA E+PITP
Sbjct: 1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGR---------GIRRFSTAAAAVEEPITP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PV+V YTQLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+AEDVNRAV+AARKAFDEG
Sbjct: 52 PVQVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+MTAYERS+I+LRFADLLE+HNDE+AALETWDNGKP+EQSA+ E+PM RLFRYYAG
Sbjct: 112 PWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAG------------------------------- 208
WADKI GLT PADGP+HVQTLHEPIGVAG
Sbjct: 172 WADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 209 ----------------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246
VLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIVL
Sbjct: 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVL 291
Query: 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERV 351
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
YD+FVEKA A A+KRVVGDPFK G++QGPQIDSEQFEKIL+YI+SGV+ GA LE GG+R
Sbjct: 352 YDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF 411
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
G+KGYYI+PTVF+ V+DDMLIA+DEIFGPVQSILK+KDLDEVI+R+N ++YGLAAGVFT
Sbjct: 412 GSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQ 471
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
NLDTANTL RALRVG+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+NYLQVKAVVT
Sbjct: 472 NLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTP 531
Query: 487 LKNPAWL 493
LKNPAWL
Sbjct: 532 LKNPAWL 538
|
Length = 538 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 787 bits (2035), Expect = 0.0
Identities = 329/476 (69%), Positives = 382/476 (80%), Gaps = 53/476 (11%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
V +T+L INGQFVD+ASGKTFPT+DPR G+VI HVAEG+AEDV+RAV AARKAFDEGPWP
Sbjct: 1 VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
RMT YERS+I+LRFADLLE+H DE+AALETWDNGKP+EQ+ EVP+ RLFRYYAGWAD
Sbjct: 61 RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVA----------------------------------- 207
KI G+T PADGP+HV TLHEPIGV
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180
Query: 208 ------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
GVLNIV+G+GPTAGAA+ASHM+VDK+AFTGST GKI++QLA
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHES+YD+
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
FVEKA A A+KRVVGDPF+ G++QGPQ+D EQFEKIL YI G + GA L TGG+R+G+K
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
GYYI+PT+F+ VKDDM IA+DEIFGPVQSILK+K +DEVI+R+N S+YGLAAGVF+ N+D
Sbjct: 361 GYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNID 420
Query: 430 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
TANTL RAL+ G+VW+NC+DVFDA+IPFGGYK SG GREKG Y+L+NYLQVKAVV
Sbjct: 421 TANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 692 bits (1787), Expect = 0.0
Identities = 261/472 (55%), Positives = 322/472 (68%), Gaps = 53/472 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T L IN +FVDS SGKTFPT++P T +VI VAE + EDV+ AV AAR AF+ G W +M
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER +++ + ADL+ER DE+AALE+ DNGKP E+SA+ +V ++ + RYYAGWADKIQ
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 186 GLTAPADGPYHVQTLHEPIGV--------------------------------------- 206
G T P DG + T EPIGV
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 207 --------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
GV+NIV G+GPTAGAA++SHM+VDK+AFTGST G+ +++ AAKS
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
NLK VTLELGGKSP IV +DAD+DKA E A + +FFNQGQCCCAGSR FV ES+YD+FVE
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
K A A KRVVGDPF QGPQ+ QF+KIL YI SG GA L TGGER G+KGY+
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYF 363
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
I+PTVFT VKDDM IAK+EIFGPV +ILK+K DEVI+R+N ++YGLAAGVFT +++ A
Sbjct: 364 IQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKAL 423
Query: 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
+ RAL+ G+VW+N ++VFDAA+PFGG+KQSG GRE G L Y QVKAV
Sbjct: 424 RVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 643 bits (1660), Expect = 0.0
Identities = 250/478 (52%), Positives = 312/478 (65%), Gaps = 54/478 (11%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
++ YT++ IN ++ DS SGKTFPT++P TG+ I V EG+ DV++AV AAR AF G
Sbjct: 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PW M A ER +++ + ADL+ER +A+LET DNGKPF +S ++P ++ RYYAG
Sbjct: 62 PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGV--------------------------------- 206
WADKI G T P DG + T HEP+GV
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181
Query: 207 --------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246
GV+N+V GYGPTAGAA++SH ++DK+AFTGST GK++
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
Q A KSNLK VTLELGGKSP IV DAD+D A E AH ALFFN GQCCCAGSRTFV ES+
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
YD+FV+++ A KRVVG+PF +QGPQID EQF+KIL+ I SG GAKLE GG+R
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I K+K +DEVI+R+N + YGLAA VFT
Sbjct: 362 GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTK 421
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
++D A T ALR G+VW+NC++V PFGGYK SG GRE G Y L Y +VK V
Sbjct: 422 DIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 577 bits (1488), Expect = 0.0
Identities = 242/485 (49%), Positives = 320/485 (65%), Gaps = 53/485 (10%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
++ +T+L ING+FVD+ASGKTF T DPRTG+VI +AEG+ EDV+ AV AAR+AFD GPW
Sbjct: 17 EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPW 76
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
PRM+ +ER +I+++FADL+E H +E+AAL+T D GK F ++P L RYYAG A
Sbjct: 77 PRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAA 136
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------- 207
DKI G T TL EPIGV
Sbjct: 137 DKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196
Query: 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
GV+N+V+G+GPTAGAA+ASHM+VDK++FTGST G+ ++Q
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
AA SNLK V+LELGGKSP ++ +DADVD A +LA +F+N+G+ C A SR +V E +YD
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYD 316
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368
+FV+K A VVGDPF +QGPQ+D +QFEKIL YI G GA L TGG+ G
Sbjct: 317 EFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD 376
Query: 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428
KGYYI+PT+FT V +DM IA+DEIFGPV S++K+K ++E I+++N ++YGLAAG+ T +L
Sbjct: 377 KGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDL 436
Query: 429 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
D ANT+ R++R G++W+NC+ FD PFGGYK SG GR++G +L YLQVK+VVT L
Sbjct: 437 DVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLY 496
Query: 489 NPAWL 493
N WL
Sbjct: 497 NSPWL 501
|
Length = 501 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 512 bits (1322), Expect = e-180
Identities = 202/464 (43%), Positives = 260/464 (56%), Gaps = 59/464 (12%)
Query: 74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
+VDS S +T ++P TG+VI V AEDV+ AV+AAR AF W + ER+ I+
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKA--WAKTPPSERAAIL 57
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
L+ ADLLE DE+A LET + GKP + A+ EVP RYYAG A K++G T P+D
Sbjct: 58 LKAADLLEERRDELAELETLETGKPLAE-ARGEVPRAIDTLRYYAGLARKLEGETLPSDP 116
Query: 194 PYHVQT----------------------------------------------------LH 201
T L
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 202 EPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 260
E G+ GVLN+V+G G G AL H +VDK++FTGST G+ + + AAK NLK VTLE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRVTLE 235
Query: 261 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 320
LGGK+P IV +DAD+D A E A + F N GQ C AGSR VHES+YD+FVE+ A
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295
Query: 321 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 380
VGDP GP I +Q E++L YI + GAKL GGE KGY+++PTV
Sbjct: 296 LKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355
Query: 381 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 440
V DM IA++EIFGPV S++ +KD DE I+ +N ++YGLAAGVFT++L+ A + R L
Sbjct: 356 VTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEA 415
Query: 441 GSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
G VWIN + D A+PFGG+KQSG GRE G L Y + K V
Sbjct: 416 GMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 487 bits (1255), Expect = e-170
Identities = 215/472 (45%), Positives = 286/472 (60%), Gaps = 55/472 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-M 124
T L ING+FVDS G T +P TG +IT +AE DV+ AV A AF E W +
Sbjct: 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAF-ETDWGLKV 65
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
+ +R + + + ADL+ER+ D +A++E DNGK F + + +V + FRYY GWADKI
Sbjct: 66 SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125
Query: 185 QGLTAPADGPYHVQTLHEPIGV-------------------------------------- 206
G D T HEPIGV
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
GV+N+VSGYG T G A++SHM++DK+AFTGST G+ V++ AAK
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
SNLK VTLELGGKSP IV +DAD++ A Y +FFN GQ CCAGSR +V E +YD+FV
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
++ A K VGDPF QGPQ+ Q+E+I+ YI SG GA +ETGG+R G +GY
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY 365
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+I+PT+FT V +DM I K+EIFGPV +++K+K +E I+R+N S YGLAA VFT+N++ A
Sbjct: 366 FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNA 425
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ AL+ G+VW+NC+++ +PFGGYKQSG GRE G Y+L NY Q+KAV
Sbjct: 426 IRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 481 bits (1240), Expect = e-167
Identities = 209/482 (43%), Positives = 275/482 (57%), Gaps = 62/482 (12%)
Query: 62 KVDYTQ---LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
Y Q L IN +FV S+ G+T T++P TG+VI V EDV++AV AARKAF E
Sbjct: 1 GKSYDQPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAF-E 59
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
W ++T ER +++ + ADL+E++ D +AA+E D+GKP+ +A ++ + RYYA
Sbjct: 60 SWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYA 119
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGV-------------------------------- 206
GWADKIQG T P TLHEP GV
Sbjct: 120 GWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKP 179
Query: 207 ---------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245
GV+NI+ GYG AG+ALA H +VDK+AFTGST TG++V
Sbjct: 180 AENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLV 239
Query: 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 305
++ AA NLK VTLE GGKSP +V EDAD+D+A + A + +N GQ C A SR +V ES
Sbjct: 240 MKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQES 298
Query: 306 VYDQFVEKANALAMKR-VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 364
+YD+FVEK + VG PF GPQ+ Q++++L YI G GAKL GGE
Sbjct: 299 IYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGE 358
Query: 365 RLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 421
+ KGY+I PT+FT V DM I K+EIFGPV I K+K +E I+++N + YGLAA
Sbjct: 359 KAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAA 418
Query: 422 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481
VFT ++ A+ + R L G VWIN + D +PFGG+K SG GRE G Y L Y Q K
Sbjct: 419 AVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTK 478
Query: 482 AV 483
AV
Sbjct: 479 AV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 477 bits (1231), Expect = e-166
Identities = 198/462 (42%), Positives = 264/462 (57%), Gaps = 60/462 (12%)
Query: 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139
G+TF T++P TG V+ VA +A DV+RAV+AAR+AF+ G W R++ ER ++LR ADL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT 199
+E H DE+A LET D GKP + +VP FR+YA DK+ G AP
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPT--GPDALA 118
Query: 200 L--HEPIGV--------------------------------------------------- 206
L EP+GV
Sbjct: 119 LITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAG 178
Query: 207 --AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264
AGVLN+V G+G TAG AL HM+VD LAFTGST G+ L+ + +SNLK V LE GGK
Sbjct: 179 LPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGK 238
Query: 265 SPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323
SP IV DA D+D AAE A +F+NQG+ C AGSR VHES+ D+F+EK A A +
Sbjct: 239 SPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKP 298
Query: 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGV 381
GDP + G + F+K+L YI SG GA+L GG+R+ G++++PTVF GV
Sbjct: 299 GDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGV 358
Query: 382 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 441
DM IA++EIFGPV S++ + +E + +N S YGLAA V+T +L A+ + R LR G
Sbjct: 359 TPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAG 418
Query: 442 SVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+VW+NCFD D PFGG+KQSG GR+K ++L Y ++K
Sbjct: 419 TVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 461 bits (1189), Expect = e-160
Identities = 200/473 (42%), Positives = 263/473 (55%), Gaps = 63/473 (13%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+LLI+G++VD AS T ++P TG+VI V AEDV+ AV+AAR AF+ W R++
Sbjct: 1 YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R ADLLE +E+AAL T + GKP + A+ E+ RYYA A +++
Sbjct: 57 AEERAAILRRIADLLEARAEELAALITLETGKPISE-ARGEIARAADFIRYYAEEARRLE 115
Query: 186 GLTAPADGPYHVQTLHEPIGV--------------------------------------- 206
G T P D EP+GV
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175
Query: 207 --------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
AGVLN+V+G G G AL +H +VD ++FTGST G+ + AA
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA- 234
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
NLKPVTLELGGKSP IV EDAD+D A + A + FFN GQ C A SR VHESVYD+FVE
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
+ A A VGDP GP I EQ +++ YI V GA+L GG+R G GY+
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYF 352
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
++PT+ GV DM IA++EIFGPV ++++KD +E I+ +N ++YGLAA +FT +L A
Sbjct: 353 VEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAF 412
Query: 433 TLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ R L G V IN A +PFGG KQSG GRE G Y L + +VK V
Sbjct: 413 RVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 458 bits (1181), Expect = e-159
Identities = 183/436 (41%), Positives = 239/436 (54%), Gaps = 60/436 (13%)
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+ AV+AAR AF W + ER+ I+ + ADLLE +E+AALET + GKP + A
Sbjct: 1 DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALG 57
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGV------------------ 206
EV FRYYAG A ++ G P+ P + EP+GV
Sbjct: 58 EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117
Query: 207 -----------------------------------AGVLNIVSGYGPTAGAALASHMEVD 231
GVLN+V+G G GAALASH VD
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177
Query: 232 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 291
K++FTGST GK +++ AA+ NLK VTLELGGKSP IV +DAD+D A + A + F N G
Sbjct: 178 KISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236
Query: 292 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351
Q C A SR VHES+YD+FVE+ VG+P GP I + Q +++L YI
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIED 296
Query: 352 GVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
GAKL GG+RL G KGY++ PTV T V DM IA++EIFGPV ++ +KD +E I+
Sbjct: 297 AKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIE 356
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREK 469
+N ++YGLAAGVFT +L+ A + L G+VWIN + V + + PFGG KQSG GRE
Sbjct: 357 LANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREG 416
Query: 470 GSYSLSNYLQVKAVVT 485
G Y L Y + K V
Sbjct: 417 GPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 449 bits (1158), Expect = e-155
Identities = 187/459 (40%), Positives = 253/459 (55%), Gaps = 62/459 (13%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG+ V E A DV+RAV+AAR AF+ G W ++T ER K++ R ADL+E +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 145 DEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 202
+E+A LET DNGK E AQ V +RYYAG ADKI+G P D G Y T E
Sbjct: 61 EELAELETRDNGKLIRETRAQ--VRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118
Query: 203 PIGV-------------------------------------------------AG----V 209
P+GV AG V
Sbjct: 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV 178
Query: 210 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 269
+N+V+G+GP G AL H V K+AFTG T TG+ + + AA+ NL PVTLELGGKSP IV
Sbjct: 179 VNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIV 237
Query: 270 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329
+DAD+D A +F GQ C AGSR V S+YD+FVE+ A A VGDP
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297
Query: 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 385
Q GP Q EK+ +Y+ + GA++ TGGER GY+ +PT+ V +DM
Sbjct: 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDM 357
Query: 386 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 445
IA++E+FGPV S++ + D +E I +N S+YGLAAG++T +L A+ + RA+ G+VW+
Sbjct: 358 RIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWV 417
Query: 446 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
N + + PFGG+K SG GRE G ++ Y Q K+V
Sbjct: 418 NTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 441 bits (1137), Expect = e-152
Identities = 181/476 (38%), Positives = 259/476 (54%), Gaps = 59/476 (12%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V++ASGKT ++P G+VI V EG AED RA++AAR+AFD G WP + A ER
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ ++ R AD + +E+A LET + GK +S + ++ FRYYAG A K G
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVY 120
Query: 190 PADGPYHVQTLHEPIGVAG----------------------------------------- 208
+T+ EP+GV G
Sbjct: 121 DVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 209 ------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 256
V+N+V+G G T GA LA +VD ++FTG T TG+ +++ AA N+K
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKK 239
Query: 257 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 316
V LELGGK+P IV DAD + A + A +FFN GQ C AGSR V ES++D+FV
Sbjct: 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAE 299
Query: 317 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYY 372
A K +G+ + GP + +E EK+L YI+ G + GA+L GG+R AKGY+
Sbjct: 300 RAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYF 359
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
++PT+F V M I ++EIFGPV ++ ++ +E I+ +N + YGLA V+T ++ AN
Sbjct: 360 VEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARAN 419
Query: 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
+ R LR G+VWIN + + A P+GGYKQSG GRE G L Y + K + L
Sbjct: 420 RVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININLS 475
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 431 bits (1111), Expect = e-148
Identities = 198/456 (43%), Positives = 275/456 (60%), Gaps = 56/456 (12%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
TL+P TG++I VA+ AEDV+ AV+AAR AF+ W M ER +I+ R A+L+ +
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DE+A LE+ D GKP + + +VP FRYYAGWADKI+G P GP+ T+ EP+
Sbjct: 59 DELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPV 118
Query: 205 GV-----------------------------------------------------AGVLN 211
GV AGVLN
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178
Query: 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271
+V+G+G AGAAL H +VDK+ FTGST G+ ++Q A NLK V+LELGGKS IV
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQ-GAAGNLKRVSLELGGKSANIVFA 237
Query: 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331
DAD+D A A +F+NQGQ C AGSR VHES+YD+F+E+ +LA GDP
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297
Query: 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 391
Q GP + QF+++L Y+ G + GA+L TGG+R GA+G++++PT+F V +M IA++E
Sbjct: 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEE 357
Query: 392 IFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 451
IFGPV S+++++D +E ++ +N ++YGLAAGV+T +L A+ + AL+ G+VWIN ++ F
Sbjct: 358 IFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRF 417
Query: 452 DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
D PFGGYKQSG GRE G +L Y +VK+V L
Sbjct: 418 DPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVNL 453
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 423 bits (1091), Expect = e-145
Identities = 185/474 (39%), Positives = 255/474 (53%), Gaps = 61/474 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L I+G +V++ SG+TF ++P TG+V+ V DV AV++A++ W MTA
Sbjct: 8 SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKI--WAAMTA 65
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ERS+I+ R D+L NDE+AALET D GKP ++++ ++ + YYAG A ++G
Sbjct: 66 MERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEG 125
Query: 187 LTAPADGPYHVQTLHEPIGV---------------------------------------- 206
P G V T EP+GV
Sbjct: 126 EQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 207 -------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253
GV N+V G G GA L H ++ K++FTG TGK V+ AA S
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS- 243
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
LK VT+ELGGKSP IV +DAD+D+AA++A A F++ GQ C G+R FV +S+ F +
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEAR 303
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAK 369
+ +GDP GP + +K+L YI G GA+L GGERL A
Sbjct: 304 LLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFAN 363
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
G ++ PTVFT DDM I ++EIFGPV S+L + D DEVI R+N ++YGLAAGVFT +L
Sbjct: 364 GAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLS 423
Query: 430 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
A+ ++ L G WIN + A +P GGYKQSG GRE G +L +Y Q+K+V
Sbjct: 424 RAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 418 bits (1077), Expect = e-143
Identities = 176/456 (38%), Positives = 254/456 (55%), Gaps = 60/456 (13%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+P TG+V+ V EG A +V+ AV+AA++AF W RM+ ER++I+ + ADL+E
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DE+A LE+ D GKP + ++P FR++A + ++ G + P DG L +P+
Sbjct: 59 DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118
Query: 205 GV-----------------------------------------------------AGVLN 211
GV GV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271
+V G+GP AGAAL +H +VD ++FTG T TG+ +++ AA NLKPV+LELGGK+P IV
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237
Query: 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331
DAD+D+A + A + F N G+ C AGSR V S+YD+F+E+ A VGDP
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLI 387
+ GP I E EK+L Y+ GA + TGG R GY+++PTV TG+ +D +
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRV 357
Query: 388 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 447
A++EIFGPV +++ + D +E I+ +N + YGLAA V+T +L A+ + R L G+VW+NC
Sbjct: 358 AQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNC 417
Query: 448 FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ V D PFGG K SG GRE G YSL Y ++K V
Sbjct: 418 WLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 414 bits (1066), Expect = e-141
Identities = 176/476 (36%), Positives = 252/476 (52%), Gaps = 64/476 (13%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
ING++V + G+ F +P G V+ + AEDV+ AV AA +AF W + +
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT--WGKTSV 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + AD +E + + +A ET DNGKP ++ ++P+ FRY+AG +G
Sbjct: 60 AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119
Query: 187 LTAPADGPYHVQTLHEPIGV---------------------------------------- 206
+ D HEP+GV
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179
Query: 207 ------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
GV+N+V+G+G AG LASH + KLAFTGSTT G++++Q AA+ NL
Sbjct: 180 LVLMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-NL 238
Query: 255 KPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
PVTLELGGKSP I +DA D D AE FNQG+ C SR V ES+YD+
Sbjct: 239 IPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDE 298
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--- 366
F+E+A VG+P G Q+ +Q EKIL Y+ G + GA++ TGGERL
Sbjct: 299 FIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLG 358
Query: 367 -GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425
KGY+ +PT+ G +DM I ++EIFGPV +++ +KD +E I +N ++YGL GV+T
Sbjct: 359 GLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWT 418
Query: 426 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481
+++ A + R ++ G VW+NC+ + A PFGGYK+SG GRE L +Y Q K
Sbjct: 419 RDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 410 bits (1055), Expect = e-139
Identities = 189/477 (39%), Positives = 274/477 (57%), Gaps = 59/477 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
QL ING+FVD+ GKT+ T++P G VI V+ EDV+RAV+AA++AF+ G W +M
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +++ R ADL+E H +E+A +E+ D+G + + +T V M+ + FRY+AGW DKIQ
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 125
Query: 186 GLTAPADG--PYHVQTL--HEPIGVAGVL------------------------------- 210
G T P + P TL EPIGV G++
Sbjct: 126 GKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQV 185
Query: 211 ----------------------NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
NI+ G G G L+ H +V KL FTGST GK +++
Sbjct: 186 TPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
A SNLK V+LELGGKSP I+ D D+DKA + ++FFN+G+ C A R FV ES++D
Sbjct: 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHD 305
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368
+FV + K +GDP GPQ +K+++Y GV GA L GG+++
Sbjct: 306 EFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDR 365
Query: 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTH 426
G++ +PTVFT V+D M IAK+E FGP+ I K+ D+D V+QR+N ++YGLA+GVFT
Sbjct: 366 PGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTK 425
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+++ A + L G+V++N ++ D A PFGG+KQSG G++ G +L+ YL+ K V
Sbjct: 426 DINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 404 bits (1041), Expect = e-138
Identities = 174/452 (38%), Positives = 236/452 (52%), Gaps = 58/452 (12%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P TG+VI V + A D + A+ AA AF W + TA ER+ I+ R+ADL+ +
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFKT--WRKTTARERAAILRRWADLIRERAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPI 204
++A L T + GKP + A+ EV ++A A +I G T P+ P + + +P+
Sbjct: 60 DLARLLTLEQGKPLAE-ARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPV 118
Query: 205 GV-----------------------------------------------------AGVLN 211
GV AGVLN
Sbjct: 119 GVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLN 178
Query: 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271
+V+G G AL + V K++FTGST GK+++ AA +K V+LELGG +PFIV +
Sbjct: 179 VVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFD 237
Query: 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331
DAD+DKA + A + F N GQ C +R +VHES+YD+FVEK K VG+ G
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297
Query: 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 391
GP I+ EK+ + V GAK+ TGG+RLG GY+ +PTV T V DDMLI +E
Sbjct: 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEE 357
Query: 392 IFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 451
FGPV I+ + DEVI R+N + YGLAA VFT +L A + AL G V IN +
Sbjct: 358 TFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS 417
Query: 452 DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
DA PFGG K+SG GRE G L YL+ K V
Sbjct: 418 DAEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 401 bits (1033), Expect = e-136
Identities = 187/451 (41%), Positives = 255/451 (56%), Gaps = 57/451 (12%)
Query: 88 PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
P G V+ AEG EDV+ AV+AARKAFD+GPWPRM+ ER+ ++L+ ADL+ + +
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGV 206
A +ET ++GKP Q A+ E+ L+RY A A + G + G + L EPIGV
Sbjct: 64 ALIETLESGKPISQ-ARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGV 122
Query: 207 -----------------------------------------------------AGVLNIV 213
AGV+NIV
Sbjct: 123 VGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIV 182
Query: 214 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 273
+GYG T G A+ H +VD ++FTGST GK + AA+ NLK V+LELGGK+P IV DA
Sbjct: 183 TGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADA 241
Query: 274 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 333
D+D AA+ + ++FN G+CC +GSR VHES+ D FV A + K VGDP +
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 334 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEI 392
G I+ Q KI Y+ +G GA L GGERL A G + +PT+FT V DM IA++EI
Sbjct: 302 GAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEI 361
Query: 393 FGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD 452
FGPV S+L + +DE I +N + YGL+AGV++ ++DTA T+ R +R G+VW+N F
Sbjct: 362 FGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGS 421
Query: 453 AAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+PFGG+KQSG GRE G Y + Y ++K V
Sbjct: 422 PELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 399 bits (1027), Expect = e-136
Identities = 177/458 (38%), Positives = 240/458 (52%), Gaps = 65/458 (14%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
DP TG+V +A G A DV+RAV AAR+AF E W R++ ER +++LR A L+ H D
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAF-ESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIG 205
E+A LE+ D GKP Q A+ +V R F YY G ADK+ G T P Y V T+ EP G
Sbjct: 61 ELARLESLDTGKPLTQ-ARADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHG 119
Query: 206 V-----------------------------------------------------AGVLNI 212
V AG LN+
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 213 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 272
V+G G AGAAL +H VD ++FTGS TG V++ AA+ N+ PVTLELGGKSP IV D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFAD 238
Query: 273 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332
AD++ A + A+ N GQ C AGSR VH S+YD+ +E+ VG P
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG-PGLEDPD 297
Query: 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAK 389
GP I ++Q +++ ++ GA++ GG A GY++ PT+ V D +A+
Sbjct: 298 LGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQ 357
Query: 390 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 449
+EIFGPV +++ + D E I +N + YGL AGV+T + D A + R LR G V++N +
Sbjct: 358 EEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNY- 416
Query: 450 VFDAA---IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
+PFGG K+SG GREKG +L NY Q K V
Sbjct: 417 -GAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 396 bits (1021), Expect = e-134
Identities = 175/471 (37%), Positives = 241/471 (51%), Gaps = 60/471 (12%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G +V A +T ++P T +VI V G A DV+RAV+AAR+AF W +
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVE 58
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ-- 185
ER+ ++ R A+ E DE+A T + G P + +V + R A +
Sbjct: 59 ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFE 118
Query: 186 ----------------GLTAPADGPYH-------------------------------VQ 198
GL P + P + +
Sbjct: 119 ERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAE 178
Query: 199 TLHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 257
L E G+ AGV N+V+G GP G AL++H +VD ++FTGST GK V + AA + +K V
Sbjct: 179 ILDE-AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-VKRV 236
Query: 258 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 317
LELGGKS I+ +DAD++KA A F N GQ C A +R V S Y + E A A
Sbjct: 237 ALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAA 296
Query: 318 AMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGAKGYYI 373
A VVGDP GP + QF+++ YI+ G++ GA+L GG E L +GY++
Sbjct: 297 AEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGL-ERGYFV 355
Query: 374 KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 433
KPTVF V DM IA++EIFGPV SI+ Y D DE I +N + YGLA V++ + + A
Sbjct: 356 KPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARA 415
Query: 434 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
+ R LR G V IN F+ PFGGYKQSG GRE G Y L +L+VK++
Sbjct: 416 VARRLRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 392 bits (1008), Expect = e-132
Identities = 182/477 (38%), Positives = 259/477 (54%), Gaps = 59/477 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L ING++V +SG+T + +P G+ ++ + + DV+RAV AA++AF W + T
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKT--WRKTTV 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + AD+++ + + +A +ET DNGKP ++ ++P+ FRY+AG +G
Sbjct: 60 AERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG 119
Query: 187 LTAPADGPYHVQTLHEPIGV---------------------------------------- 206
D L EPIGV
Sbjct: 120 SANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSL 179
Query: 207 ------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254
GV+NIV+G G +G L +H +DKLAFTGST G+ V AAK L
Sbjct: 180 LELAKIIQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-KL 238
Query: 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314
P TLELGGKS I+ +DA+ DKA E A + FNQGQ CCAGSR FV E +YD+FV K
Sbjct: 239 IPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKL 298
Query: 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKG 370
VG+P Q G Q++ +Q +KIL Y+ + GAK+ TGG RL KG
Sbjct: 299 KEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKG 358
Query: 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
++I+PT+ V +DM +A++EIFGPV +++K+K DEVI +N S+YGL GVFT +++
Sbjct: 359 FFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINR 418
Query: 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
A + RA+ G VW+N ++ A PFGGYK+SG GRE L Y Q+K + L
Sbjct: 419 ALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYIDL 475
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 391 bits (1006), Expect = e-132
Identities = 183/457 (40%), Positives = 242/457 (52%), Gaps = 63/457 (13%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG+V+ V AEDV+ AV +A+ A E W + ER +I+ + ADLL N
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DEIA LET DNGKP E A+ ++ + YYAG A + G P G T EP+
Sbjct: 59 DEIARLETIDNGKPIE-EARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117
Query: 205 GV-------------------------------------------------AG----VLN 211
GV AG V N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177
Query: 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271
+V G G T G L H +V K++FTGS TGK V+ AAK +K VTLELGGKSP I+ +
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235
Query: 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331
DAD++ A A A F +QGQ C G+R FV S+ D+F E+ K +GDP
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDML 386
Q G I E EK+L YI S GAK+ GGER+ G+Y+ P V T DDM
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMT 355
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 446
I ++EIFGPV SIL + +EVI+R+N + YGLAAGVFT +L A+ ++ L+ G+ WIN
Sbjct: 356 IVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWIN 415
Query: 447 CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+++ +PFGGYKQSG GRE G+ +L +Y Q+K V
Sbjct: 416 TYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 378 bits (972), Expect = e-127
Identities = 174/469 (37%), Positives = 254/469 (54%), Gaps = 60/469 (12%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V+ ++G T ++P G+VI V EDV RA++AAR+A E W M+ ER
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGE--WAAMSPMER 59
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+I+ R ADL+ N+E+A LET D GK +++ ++ +F ++AG A + G
Sbjct: 60 GRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEII 119
Query: 190 PADGPYHVQTLHEPIGVAG----------------------------------------- 208
P GP T+ EP+GV
Sbjct: 120 PLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 209 ------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 256
V N+V G G G L +H +V K++FTG TGK ++ AA +LK
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMA-AAAGHLKH 238
Query: 257 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 316
VT+ELGGKSP IV +DAD++ A + A FF+ GQ C G+R FVH+ + ++F+ +
Sbjct: 239 VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVE 298
Query: 317 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYY 372
+ +GDPF + GP I + +K+L YI G GA L TGG R G++
Sbjct: 299 RTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFF 358
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
++PTVF DDM I ++EIFGPV ++L + D DEVI R+N ++YGLA GVFT +L A+
Sbjct: 359 VEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAH 418
Query: 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481
+ L G+VWIN ++++ A PFGGYKQSG GRE G +L++Y +VK
Sbjct: 419 RVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 374 bits (962), Expect = e-126
Identities = 173/471 (36%), Positives = 244/471 (51%), Gaps = 61/471 (12%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING+FV S+SG+T L+P TG+V+ V AED +RAV AA A W R+ A ER
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIER 59
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ + + ADL+ + DE+A L + GK A+ EV T Y A WA +I+G
Sbjct: 60 AAYLRKLADLIRENADELAKLIVEEQGKTLSL-ARVEVEFTADYIDYMAEWARRIEGEII 118
Query: 190 PADGPY-HVQTLHEPIGV------------------------------------------ 206
P+D P ++ PIGV
Sbjct: 119 PSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178
Query: 207 -----------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 255
AGVLNIV+G G G AL +H +V ++ TGST G+ +++ AA+ N+
Sbjct: 179 FAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NIT 237
Query: 256 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 315
V+LELGGK+P IV +DAD+D A + + N GQ C R +VHE +YD+F+EK
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLV 297
Query: 316 ALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIK 374
VGDPF GP ++ +K+ + + V+ GA L TGG+R G KGY+ +
Sbjct: 298 EKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYE 357
Query: 375 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 434
PTV T V+ DM I ++EIFGPV ++K+ LDE I+ +N S+YGL + ++T NL+TA
Sbjct: 358 PTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRA 417
Query: 435 MRALRVGSVWINCFDVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAVV 484
L G +IN + F+A F G+K+SG G G + L YLQ K V
Sbjct: 418 TNELEFGETYINREN-FEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 373 bits (961), Expect = e-125
Identities = 169/475 (35%), Positives = 234/475 (49%), Gaps = 63/475 (13%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I G++V + +T + P T +V+ V E DV+ AV+AAR+AFD GPWPR++
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK---I 184
ER+ ++ R AD LE DE+A L T +NG P S + + P L RYYA A
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120
Query: 185 QGLTAPADGPYHVQTLHEPIGV-------------------------------------- 206
+ G V EP+GV
Sbjct: 121 ERRPGSGGGHVLV--RREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPL 178
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
GV+N+V G L H VDK++FTGST G+ + +
Sbjct: 179 DAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG- 236
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
L VTLELGGKS IV +DAD+D A A N GQ C A +R V S YD+ V
Sbjct: 237 ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVV 296
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--K 369
E A VGDP Q GP + Q E++ YI G GA+L TGG R +
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDR 356
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
G++++PT+F V +DM IA++EIFGPV S++ Y D D+ ++ +N S YGL+ V+T +++
Sbjct: 357 GWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVE 416
Query: 430 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
+ R +R G+V +N F + D PFGG+KQSG GRE G L YL+ K++
Sbjct: 417 RGLAVARRIRTGTVGVNGFRL-DFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 363 bits (933), Expect = e-121
Identities = 164/461 (35%), Positives = 229/461 (49%), Gaps = 66/461 (14%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P T +VI + A DV+ A++AAR+AFD G W A ER++ + + + LE +
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARKE 60
Query: 146 EIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPAD--GPYHVQ 198
E+ AL + G P ++ Q + P+ RY+A AD L PA GP
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGH--LRYFADLADSFPWEFDLPVPALRGGPGRRV 118
Query: 199 TLHEPIGV---------------------------------------------------- 206
EP+GV
Sbjct: 119 VRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDL 178
Query: 207 -AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 265
AGV+N+V+G G AL + VD ++FTGST G+ ++ AA + LK V LELGGKS
Sbjct: 179 PAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKS 237
Query: 266 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325
IV +DAD+ AA A N GQ C +R V S YD+ VE A VGD
Sbjct: 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGD 297
Query: 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGVKD 383
P G GP I + Q +++ YI G D GA+L TGG R KG+Y++PT+F V +
Sbjct: 298 PADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDN 357
Query: 384 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 443
DM IA++EIFGPV ++ Y D DE ++ +N S YGL+ GV++ ++D A + R +R GSV
Sbjct: 358 DMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSV 417
Query: 444 WINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
IN + PFGGYKQSG GRE G L +L+ K++
Sbjct: 418 GINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 362 bits (930), Expect = e-121
Identities = 175/460 (38%), Positives = 241/460 (52%), Gaps = 63/460 (13%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P T I + AEDV+ AV AAR+AF W + T ER+K + A+ +
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTL 200
+E+A LE DNGKP ++ A +V F YYA A+++ A + +
Sbjct: 59 EELAELEARDNGKPLDE-AAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117
Query: 201 HEPIGV-----------------------------------------------------A 207
EP+GV
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267
GVLN+V+G G AGA LA+H +DK++FTGST TG V+Q AA+ ++KPV+LELGGKSP
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236
Query: 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327
IV +DAD++KA E A + F+N GQ C A SR VHES+ D F+E+ A VGDP
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296
Query: 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGAKGYYIKPTVFTGVKDDM 385
+ G++ GP + Q+EK+L +I G + GA+L GG R KGY+I PTVF V D
Sbjct: 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDS 356
Query: 386 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 445
I ++EIFGPV + + DE I +N S+YGLAA V + + + + + AL G VWI
Sbjct: 357 RIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWI 416
Query: 446 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
NC P+GGYK+SG GRE G + L NYL+VK +
Sbjct: 417 NCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 358 bits (920), Expect = e-119
Identities = 159/472 (33%), Positives = 236/472 (50%), Gaps = 58/472 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T+LLING+ V G+ P +P TG+V+ +AE A V+ AV+AA AF E W + T
Sbjct: 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQTT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER++ +L+ AD +E + DE A LE+ + GKP + E+P +FR++AG A ++
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 186 GLTAPADGPYHVQTLH-EPIGV-------------------------------------- 206
G A H + +P+GV
Sbjct: 120 GKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPL 179
Query: 207 --------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
GVLN+V+G G T G AL H +V ++ TGS TGK VL AA S
Sbjct: 180 TALKLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADS 239
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
+K LELGGK+P IV +DAD+D E ++N GQ C A R + +YD V
Sbjct: 240 -VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVA 298
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKGY 371
K A VGDP + GP I + +++ ++ R+ G ++ TGGE KGY
Sbjct: 299 KLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGY 358
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
Y +PT+ G + D I + E+FGPV S+ + D D+ ++ +N S YGLA+ V+T ++ A
Sbjct: 359 YYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRA 418
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ + L+ G W+N + + +P GG KQSG G++ Y L +Y V+ V
Sbjct: 419 HRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 354 bits (909), Expect = e-117
Identities = 181/499 (36%), Positives = 250/499 (50%), Gaps = 68/499 (13%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
I P + QL I G++ + GK P ++P T + I + AEDV+ AV AARKA
Sbjct: 2 AIPVPRR----QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKA 57
Query: 116 FDE---GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR 172
F W R T R+K + A + E+A LET D GKP +++A +
Sbjct: 58 FKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAG- 116
Query: 173 LFRYYAGWADKIQGL-TAPADGP---YHVQTLHEPIG------------------VA--- 207
F YYA A+ + AP P + L EP+G VA
Sbjct: 117 CFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPAL 176
Query: 208 --------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAF 235
GVLN+V+G G AGA LASH VDK+AF
Sbjct: 177 AAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAF 236
Query: 236 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 295
TGST TG+ ++ AA+ +KPV+LELGGKSP IV +D D+DKA E A + F+ GQ C
Sbjct: 237 TGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICS 295
Query: 296 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 355
A SR VHE + +F+EK A + DP + G + GP + Q+EK+LK+I +
Sbjct: 296 ATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSE 355
Query: 356 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 413
GA + GG+R KG++I+PT+ T V M I ++E+FGPV + + DE I+ +N
Sbjct: 356 GATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELAN 415
Query: 414 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 473
S YGLA V +++L+ + A + G VWINC P+GG K+SG GRE G +
Sbjct: 416 DSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWG 475
Query: 474 LSNYLQVKAVVTALKNPAW 492
L NYL VK V + + W
Sbjct: 476 LENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 352 bits (904), Expect = e-117
Identities = 164/453 (36%), Positives = 230/453 (50%), Gaps = 57/453 (12%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+DP TG+ I V + A DV+ AV+AA AF W R T ERSK +L+ AD +E + +
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPI 204
E+AALE+ + GKP E+P FR++AG A ++G A P H + EPI
Sbjct: 60 ELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPI 119
Query: 205 GV----------------------------------------------------AGVLNI 212
GV GV+N+
Sbjct: 120 GVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAEVLPPGVVNV 179
Query: 213 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 272
V G G +AG AL +H V ++ TGS TGK V + AA LK V LELGGK+P IV +D
Sbjct: 180 VCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFDD 238
Query: 273 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332
AD+D A A ++N GQ C A R +VHESVYD+FV VGDP +
Sbjct: 239 ADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTE 298
Query: 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEI 392
GP + Q E++ ++ A++ TGG R GY+ +PTV GV D I ++EI
Sbjct: 299 MGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEI 357
Query: 393 FGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD 452
FGPV ++ + D DE I+ +N +YGLA+ V+T ++ A L L G+VW+N
Sbjct: 358 FGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLA 417
Query: 453 AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
A +P GG+KQSG G++ Y+L +Y ++K V+
Sbjct: 418 AEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 351 bits (902), Expect = e-117
Identities = 164/453 (36%), Positives = 217/453 (47%), Gaps = 65/453 (14%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P TG+V +++AV+AA+ AF W ER +L AD +E + +
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--DKIQGLTAPADGPYHVQTLHEP 203
E+A L T + GKP + AQ EV RY A D++ V+ +P
Sbjct: 60 ELARLLTLEQGKPLAE-AQFEVGGAVAWLRYTASLDLPDEVIEDDDTR----RVELRRKP 114
Query: 204 IGV----------------------------------------------------AGVLN 211
+GV GVLN
Sbjct: 115 LGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVLPPGVLN 174
Query: 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271
+VSG G G AL SH ++ K++FTGST TGK V+ AAK LK VTLELGG IV
Sbjct: 175 VVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP 232
Query: 272 DADVDKAAE-LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330
D D+D A L A F N GQ C A R +VHES+YD+F E ALA VVGD G
Sbjct: 233 DVDIDAVAPKLFWGA-FINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPG 291
Query: 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 390
GP + Q++K+ + + GAK+ GGE L GY+I PT+ + I +
Sbjct: 292 TTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDE 351
Query: 391 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 450
E FGPV +LKY D DEVI R+N S+YGL A V++ +L+ A + R L G+VWIN
Sbjct: 352 EQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGA 411
Query: 451 FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
D PFGG+KQSG G E G L Y Q + +
Sbjct: 412 LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 342 bits (880), Expect = e-113
Identities = 168/474 (35%), Positives = 237/474 (50%), Gaps = 65/474 (13%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G++V G+ +P T DV+ A AED + A++AA AF W R +
Sbjct: 4 YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPE 59
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R+ I+ + D LE +E+A L T + GK + A+ EV ++FRYYAG A ++ G
Sbjct: 60 ARADILDKAGDELEARKEELARLLTREEGKTLPE-ARGEVTRAGQIFRYYAGEALRLSGE 118
Query: 188 TAPADGP-YHVQTLHEPIGV---------------------------------------- 206
T P+ P V+T EP+GV
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 207 -------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253
AGV N+V G G G AL H +VD ++FTGST G+ + AA +
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA-AR 237
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
V LE+GGK+P +V +DAD+D A E A FF+ GQ C A SR V E ++D+FVE
Sbjct: 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGY 371
VGD G+ GP + Q EK L+YI GAKL GGERL +GY
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
Y+ P +F GV +DM IA++EIFGPV ++++ +D DE + +N +++GL+AG+ T +L A
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHA 417
Query: 432 NTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 483
R + G V +N D +PFGG K S G RE+G +L Y +K V
Sbjct: 418 THFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 340 bits (873), Expect = e-112
Identities = 172/454 (37%), Positives = 245/454 (53%), Gaps = 47/454 (10%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
ING++V + K+FPT++P TG+V+ V + E EDV+ AV+AAR AF+ W + +
Sbjct: 24 HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGH 81
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ-- 185
R++ + R A +++H A LE+ DNGKP +S ++P+ R F ++AGWA +
Sbjct: 82 VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDTE 141
Query: 186 ----------GLTAPADGPY-------------------------------HVQTLHEPI 204
G P + P + E
Sbjct: 142 LAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAG 201
Query: 205 GVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264
GVLNIV+G G G+ALA+H VDK+AFTGST G+ + + A + K ++LELGGK
Sbjct: 202 LPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGSTEVGRALRRATAGTG-KKLSLELGGK 259
Query: 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 324
SPFIV +DAD+D A E A++FNQGQ CCAGSR V ESV ++ + K VG
Sbjct: 260 SPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVG 319
Query: 325 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 384
DP I G +D Q ++I + + G GA + G L +KG + PT+FT V
Sbjct: 320 DPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPA 379
Query: 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 444
IA++EIFGPV +L ++ E + +N + YGLAA V++ NL A + +L+ G VW
Sbjct: 380 SRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVW 439
Query: 445 INCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 478
IN ++FDAA FGGY++SG GRE G L YL
Sbjct: 440 INGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 339 bits (871), Expect = e-112
Identities = 174/484 (35%), Positives = 251/484 (51%), Gaps = 66/484 (13%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G+FV S SG+TF TL P T +V+ VA G A DV+RA AA++AF W + A
Sbjct: 3 HFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKAA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER + + + ADL+E+H DEIA LE D G+P Q+ Q +V FR++A + + G
Sbjct: 61 ERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ-QVIRAAENFRFFADKCEEAMDG 119
Query: 187 LTAPADGPYHVQTLHEPIGVA--------------------------------------- 207
T P D + T+ P+G
Sbjct: 120 RTYPVDTHLNY-TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTA 178
Query: 208 --------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253
GV N+V G+G AG AL +H +V ++FTG T TG I+++ A +
Sbjct: 179 ARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT- 237
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
LK ++ELGGKSP IV +DAD+++A + + +F G+ C A SR V ES+ + FVEK
Sbjct: 238 LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEK 297
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA----- 368
VG P + GP I E K+L Y+ + GA + GGER
Sbjct: 298 LVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGED 357
Query: 369 --KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
+G Y+ PTVFTG + M IA++EIFGPV +++ +KD +E I+++N ++YGLA V+T+
Sbjct: 358 LGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTN 417
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
++ A+ + AL G +W+N +V PFGG K SG GRE G+YS Y + K V A
Sbjct: 418 DVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALA 477
Query: 487 LKNP 490
L
Sbjct: 478 LGPH 481
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 336 bits (864), Expect = e-111
Identities = 170/480 (35%), Positives = 244/480 (50%), Gaps = 69/480 (14%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I G++V G+ F + P TG V V AED+ A+ AA A + W + + ER
Sbjct: 5 IGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAER 62
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ I+ + AD +E + + +A ETWDNGKP ++ ++P+ FRY+AG +G +
Sbjct: 63 ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSIS 122
Query: 190 PADGPYHVQTLHEPIGVAG----------------------------------------- 208
D HEP+GV G
Sbjct: 123 EIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVL 182
Query: 209 -----------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 257
V+N+V+G+G AG LAS + K+AFTG TTTG++++Q A++ N+ PV
Sbjct: 183 MELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-NIIPV 241
Query: 258 TLELGGKSPFIVCE------DADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQF 310
TLELGGKSP I DA DKA E + +F NQG+ C SR + ES+YD+F
Sbjct: 242 TLELGGKSPNIFFADVMDADDAFFDKALE--GFVMFALNQGEVCTCPSRALIQESIYDRF 299
Query: 311 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----L 366
+E+A G+P G Q EQ EKIL YI G + GA++ TGGER
Sbjct: 300 MERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGG 359
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
G Y PT F G + M I ++EIFGPV ++ +KD +E ++ +N + YGL AGV+T
Sbjct: 360 LLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTR 418
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486
+ +TA + R ++ G VW NC+ ++ A FGGYKQSG GRE L +Y Q K ++ +
Sbjct: 419 DGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLVS 478
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 331 bits (851), Expect = e-109
Identities = 160/456 (35%), Positives = 230/456 (50%), Gaps = 61/456 (13%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG V+ V A DV+RAV+AAR AF E W T ER++++ A L H
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
+E+A ++ D G P + +V + L Y+AG +++G T P G TL EP
Sbjct: 59 EELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117
Query: 205 GV----------------------------------------------------AGVLNI 212
GV GV NI
Sbjct: 118 GVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVLPPGVFNI 177
Query: 213 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 272
+ G G TAGAAL H +V ++A GS TG+ +++ AA+ +K VTLELGGK+ IV D
Sbjct: 178 LPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFPD 236
Query: 273 ADVDKAAELAHYALFFN-QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331
AD + AA+ A + F GQ C + SR FVHES+YD+ + + VGDP
Sbjct: 237 ADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPAT 296
Query: 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGYYIKPTVFTGVKDDMLI 387
GP + +Q+++++ YI S GA+L TGG R G+Y++PTVF V M I
Sbjct: 297 TMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRI 356
Query: 388 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 447
A++EIFGPV S+L+++D E++ ++N +YGL A ++T+++ A+ R + G VWIN
Sbjct: 357 AREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWING 416
Query: 448 FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
PFGG K SG GRE+ L +Y Q K V
Sbjct: 417 SSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 327 bits (839), Expect = e-107
Identities = 180/463 (38%), Positives = 237/463 (51%), Gaps = 70/463 (15%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG VI V A DV+RAV+AA+ AF W A ER K++ R AD LE +
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEP 203
+E+A L + G A+ E + LFRY+ G A +++G T P GP + T+ EP
Sbjct: 59 EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREP 117
Query: 204 IGV----------------------------------------------------AGVLN 211
+GV AGVLN
Sbjct: 118 LGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVLPAGVLN 177
Query: 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271
+++GYG GAAL H +VDK+ FTGST GKI+ + AA L PV+LELGGKSP IV
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFP 236
Query: 272 DADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330
DAD+D A + A + F QGQ C AGSR FVHE +YD F+EK A K +GDP
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEA 296
Query: 331 IQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG----ERLGAKGYYIKPTVFTGVKDDM 385
G I +QF K+ YI G+ GA + GG E A G++++PT+F+GV ++
Sbjct: 297 TDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEW 356
Query: 386 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 445
+A++EIFGPV + +KD DEVI +N S YGLAA V+T +L A AL G V +
Sbjct: 357 RLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQV 416
Query: 446 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL----QVKAVV 484
N +GG+KQSG GRE SL L Q K V
Sbjct: 417 NQGGGQQPGQSYGGFKQSGLGRE---ASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 323 bits (830), Expect = e-105
Identities = 161/477 (33%), Positives = 244/477 (51%), Gaps = 56/477 (11%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L ING++ +A +TF T+DP T + +A G++ D++RAVSAAR F+ G W +
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R ++ + ADL+E H +E+A LET D GKP S + ++P R R+YA DK+
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 186 GLTAPADGPYHVQTLHEPIGVAGVL----------------------------------- 210
G A + EP+GV +
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199
Query: 211 ------------------NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
N+V+G+G AG AL+ H ++D +AFTGST TGK +L+ A S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259
Query: 253 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
N+K V LE GGKS IV D D+ +AA +F+NQGQ C AG+R + ES+ D+F+
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
A G P G ID + + +IR G G L G R
Sbjct: 320 ALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDG--RNAGLAA 377
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
I PT+F V + ++++EIFGPV + ++ ++ +Q +N SQYGL A V+T +L A
Sbjct: 378 AIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRA 437
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
+ + R L+ GSV++N ++ D +PFGGYKQSG GR+K ++L + ++K + +L+
Sbjct: 438 HRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLE 494
|
Length = 494 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-102
Identities = 168/475 (35%), Positives = 235/475 (49%), Gaps = 62/475 (13%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G+ V S K +P T VI VA DV+ AV++A +AF W + T
Sbjct: 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-SAWAKTTPA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER +I+LR ADL+E+H +E+A LET +GK S EV + RY+AGWA KI G
Sbjct: 61 ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE 120
Query: 188 T------APADGPYHVQTLHEPIGV----------------------------------- 206
T + Y T EP+GV
Sbjct: 121 TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180
Query: 207 ------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
GVLN+V+G G GA L SH +V K++FTGS TGK + +
Sbjct: 181 TPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKIGRQ 239
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
AA S+L VTLELGGK+ +DAD+D E A F +QGQ C A R +VH S +D
Sbjct: 240 AA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368
+ V K VG P + GP + F+K+ Y+ G ++ GGE L
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG 358
Query: 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428
+GY+++PT+ D + ++E FGPV S + Y+D +E+IQ N + +GL A V+T+NL
Sbjct: 359 EGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNL 418
Query: 429 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
A + + G+VW+N D A+PFGG KQSG GRE GS + +Y ++K+V
Sbjct: 419 SKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 305 bits (783), Expect = 4e-99
Identities = 162/463 (34%), Positives = 222/463 (47%), Gaps = 72/463 (15%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+ P G+VI V EDV +A++AA++ E + AYER++I+ R A LLE
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMK--SLPAYERAEILERAAQLLEE 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ---- 198
+E A + GKP + A+ EV R A A ++ G T P D +
Sbjct: 59 RREEFARTIALEAGKPIKD-ARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIG 117
Query: 199 -TLHEPIGV--------------------------------------------------- 206
T+ EPIGV
Sbjct: 118 FTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAG 177
Query: 207 --AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264
G LN+V+G G T G AL + V ++FTGS G+ +A K+ LK VTLELG
Sbjct: 178 LPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEA---IARKAGLKKVTLELGSN 234
Query: 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 324
+ IV DAD++KA E F N GQ C + R FVHE +YD+F+E+ A K VVG
Sbjct: 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVG 294
Query: 325 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 384
DP GP I + E+I +++ V+GGA+L TGG+R GA ++PTV T V D
Sbjct: 295 DPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPPD 351
Query: 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 444
M + +E+F PV S+ + LDE I +N S YGL AGVFT++L A R L VG V
Sbjct: 352 MKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVM 411
Query: 445 INCFDVFDA---AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
IN D +P+GG K+SG GRE Y++ ++K V
Sbjct: 412 IN--DSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 305 bits (782), Expect = 5e-99
Identities = 160/456 (35%), Positives = 225/456 (49%), Gaps = 62/456 (13%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
F L+P G V VA G +D RA++AA AF W T ER +I+L+ A+++ER
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLH 201
D++ L + G + A E T L R AG +++G T P+D P V ++
Sbjct: 59 RADDLIDLLIDEGGSTY-GKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117
Query: 202 EPIGV-----------------------------------------------------AG 208
P+GV G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268
V N+V+G G G L V + FTGST G+ + + A + +LK +TLELGGK+P I
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236
Query: 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328
V DAD+D A A + F +QGQ C + SR V E VYD+FV+K A A K VGDP
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 388
GP I Q E+I + + V GAKL TGG+ G + +PTV T V DM I
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIF 353
Query: 389 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 448
++E FGPV S++ KD +E ++ +N ++YGL+A + T++L A L L G V IN
Sbjct: 354 REETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDP 413
Query: 449 DVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ D A +PFGG K SG GRE G +S+ + ++K +
Sbjct: 414 TILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 304 bits (781), Expect = 3e-98
Identities = 166/472 (35%), Positives = 243/472 (51%), Gaps = 58/472 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
TQ LI G++ D+ GKTFP +P TG+VI +V + N A+++A AF W ++T
Sbjct: 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERSKI+ R+ DL+ + +++A L T + GKP + A EV Y+A A ++
Sbjct: 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL-KEAIGEVAYGASFLEYFAEEAKRVY 141
Query: 186 G-LTAPADGPYHVQTLHEPIGVAG------------------------------------ 208
G + + L +P+GV G
Sbjct: 142 GDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPL 201
Query: 209 -----------------VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
VLN+V G P G AL + +V K+ FTGST GK ++ AA
Sbjct: 202 TALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+ +K V+LELGG +PFIV +DAD+D A + A + F N GQ C +R V E +YD+F
Sbjct: 262 T-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFA 320
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
E + K VVGD F+ G+ QGP I+ +K+ +++ V GAK+ GG+R G
Sbjct: 321 EAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGT 380
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+ +PTV V +DMLI ++E+FGPV + ++K +E I +N ++ GLAA +FT +L A
Sbjct: 381 FYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRA 440
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ AL G V +N + PFGG KQSG GRE Y + YL++K V
Sbjct: 441 WRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 301 bits (774), Expect = 2e-97
Identities = 168/476 (35%), Positives = 253/476 (53%), Gaps = 65/476 (13%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I G++VDSASG+TF + +P +V+ A DV+ AV AAR+AF E W ++ A
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPAP 59
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ + R A+LL++ +E+A L T + GKP + + +V + +Y AG ++ G
Sbjct: 60 RRAEYLFRAAELLKKRKEELARLVTREMGKPLAE-GRGDVQEAIDMAQYAAGEGRRLFGE 118
Query: 188 TAPADGPYHVQ-TLHEPIGVAGVL------------------------------------ 210
T P++ P T +PIGV ++
Sbjct: 119 TVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA 178
Query: 211 -----------------NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253
N+V G G G AL H +VD ++FTGST G+ + + A+ N
Sbjct: 179 LKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
K V LE+GGK+P IV +DAD+D A E A ++ F GQ C A SR VHESVYD+F+++
Sbjct: 239 -KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKR 297
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAK 369
A + VGD GP I+ Q EK+L Y G + GA L GGERL K
Sbjct: 298 FVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEK 357
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
GY+++PTVFT V DM IA++EIFGPV ++++ L+E I+ +N ++YGL++ ++T +++
Sbjct: 358 GYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVN 417
Query: 430 TANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 483
A R L G ++N + + +PFGG K+SG G RE G+ +L + + KAV
Sbjct: 418 KAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 300 bits (770), Expect = 2e-97
Identities = 147/436 (33%), Positives = 205/436 (47%), Gaps = 63/436 (14%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV+RA +AA A W ER+ I+ + A++LE DEIA ++G A
Sbjct: 1 DVDRAYAAAAAAQKA--WAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTR-PKA 57
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGVL------------ 210
EV + R AG + +G P+D P P+GV GV+
Sbjct: 58 AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMR 117
Query: 211 ---------NIV-----SGYGPTAGAALASHME--------------------------- 229
N V S T G +A E
Sbjct: 118 SVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHP 177
Query: 230 -VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 288
V ++FTGST G+ + +LA + +LK V LELGG +P IV +DAD+D A A + F
Sbjct: 178 RVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236
Query: 289 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 348
+QGQ C A R VHESVYD+FVEK A A VGDP GP I+ Q +++
Sbjct: 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAI 296
Query: 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408
+ V GA+L TGG +G + +PTV + V DM I ++EIFGPV ++ + D +E
Sbjct: 297 VEDAVAAGARLLTGGT---YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEA 353
Query: 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGR 467
++ +N ++YGL+A VFT +L+ A L G V IN V D +PFGG K SG GR
Sbjct: 354 VELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGR 413
Query: 468 EKGSYSLSNYLQVKAV 483
G SL + + + +
Sbjct: 414 FGGPASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 7e-96
Identities = 152/480 (31%), Positives = 223/480 (46%), Gaps = 70/480 (14%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ V + + + +P +V+ V + E+ AV AAR AF W R
Sbjct: 35 LVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPP 90
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER++++LR A LL R E+AA + GK + + A +V YYA +++G
Sbjct: 91 EERARLLLRAAALLRRRRFELAAWMVLEVGKNWAE-ADADVAEAIDFLEYYAREMLRLRG 149
Query: 187 LTAPADGPYHVQTLHEPIGVAGVL------------------------------------ 210
+ ++ P+GV V+
Sbjct: 150 FPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIA 209
Query: 211 -----------------NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 251
N + G G G L H +V +AFTGS G + + AAK
Sbjct: 210 AKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQ 269
Query: 252 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
LK V E+GGK+ IV EDAD+D+AAE + F QGQ C A SR VHESVYD
Sbjct: 270 PGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYD 329
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG- 367
+F+E+ VGDP + GP ID ++I +YI G G +L GGE L
Sbjct: 330 EFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLEL 388
Query: 368 -AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
A+GY+++PT+F V D +A++EIFGPV +++K KD DE ++ +N ++YGL GVF+
Sbjct: 389 AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSR 448
Query: 427 NLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 483
+ + R VG+++ N PFGG+K SG G + G L ++Q K V
Sbjct: 449 SPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = 4e-94
Identities = 148/450 (32%), Positives = 233/450 (51%), Gaps = 59/450 (13%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
+P TG++I V + ++ A+ AA +AF W TA ERS ++ ++ +L+ + D+
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFKT--WRATTAKERSSLLRKWYNLMMENKDD 60
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPIG 205
+A L T +NGKP ++ A+ E+ ++A A ++ G T P+ + + +P+G
Sbjct: 61 LARLITLENGKPLKE-AKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVG 119
Query: 206 V-----------------------------------------------------AGVLNI 212
V GVLN+
Sbjct: 120 VCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179
Query: 213 VSG-YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271
++G G L + V K++FTGST GKI+++ +A + +K V++ELGG +PFIV +
Sbjct: 180 ITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSAST-VKKVSMELGGNAPFIVFD 238
Query: 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331
DAD+D+A E A + F N GQ C +R +VH+ +YD+F +K K VG+ G+
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298
Query: 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 391
QGP I+ + EK+ K+I V+ GAK+ TGG+R G + +PTV + V DML++K+E
Sbjct: 299 TQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEE 358
Query: 392 IFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 451
FGP+ + K+ D +EVI +N ++ GLAA F+ +L + AL G V IN +
Sbjct: 359 TFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLIS 418
Query: 452 DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481
+ PFGG KQSG GRE Y + YL+ K
Sbjct: 419 NVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 289 bits (742), Expect = 1e-92
Identities = 160/479 (33%), Positives = 225/479 (46%), Gaps = 71/479 (14%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING FV SGKTF ++P G VI V E A +V+ AV+AAR A +GPW +MT ER
Sbjct: 5 INGAFV--ESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTVAER 61
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--- 186
+ ++ AD +ER D+ A E D GKP ++ ++P FR +A
Sbjct: 62 ADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF 121
Query: 187 -LTAPADGPYHVQTLHEPIGV--------------------------------------- 206
+ P + +P+GV
Sbjct: 122 EMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181
Query: 207 --------------AGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
GV N+V G+GP +AG L H VD + FTG T TG +++ AA
Sbjct: 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD 241
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+KPV+ ELGGK+ IV D D D A + F N GQ C R +V ++D+FV
Sbjct: 242 G-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFV 300
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-------E 364
A A +G P GP I +E +K+L Y V+ GA + TGG
Sbjct: 301 AALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDA 360
Query: 365 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424
A G +++PT++TG+ D + +EIFGP I + +EVI +N + YGLAA V+
Sbjct: 361 L--AGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVW 418
Query: 425 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
T +L A+ + R + VG VW+N + + D PFGG K SG GRE G +SL Y ++ V
Sbjct: 419 TEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 280 bits (719), Expect = 9e-90
Identities = 140/439 (31%), Positives = 196/439 (44%), Gaps = 68/439 (15%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
+ A+ A AF W + + ER+ ++ + ADLL DE+A L T + GKP + A+
Sbjct: 1 IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAE-AR 57
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGVL---------- 210
EV + RYYA + + A D +EP+GV VL
Sbjct: 58 AEVEKCAWICRYYA---ENAEAFLADEPIETDAG-KAYVRYEPLGV--VLGIMPWNFPFW 111
Query: 211 --------NIVSGYG---------PTAGAA------------------LASHMEVDKL-- 233
N+++G P A L +V+ +
Sbjct: 112 QVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIA 171
Query: 234 -------AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 286
TGS G+ V A K NLK LELGG PFIV +DAD+DKA + A
Sbjct: 172 DPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGR 230
Query: 287 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 346
N GQ C A R VHE VYD+F+EK VGDP GP + +++
Sbjct: 231 LQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELH 290
Query: 347 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406
+ + V GA L GG+R G + PTV T V M +E+FGPV +++K KD +
Sbjct: 291 EQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEE 350
Query: 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 466
E I +N S +GL VFT +L+ A + R L G V+IN D +PFGG K+SG G
Sbjct: 351 EAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYG 410
Query: 467 REKGSYSLSNYLQVKAVVT 485
RE G + + ++ +K V
Sbjct: 411 RELGRFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 279 bits (716), Expect = 5e-89
Identities = 157/463 (33%), Positives = 228/463 (49%), Gaps = 69/463 (14%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+P G+VI V E+V A+ A KA D + AY+R KI+++ A+L+ER
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG-PYH----V 197
+E+A L T + GKP +QS + EV T RLF+ A A ++G T P D Y+
Sbjct: 59 RKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117
Query: 198 QTLHEPIGVAG------------------------------------------------- 208
T+ EPIGV G
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177
Query: 209 ----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK--SNLKPVTLELG 262
V+N+V+GYG G + ++ +V+ ++FTGST G L +A+K K V LELG
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVG---LLIASKAGGTGKKVALELG 234
Query: 263 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322
G P IV +DAD+++A +A F N GQ C A R V E VYD+F++ K
Sbjct: 235 GSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLK 294
Query: 323 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 382
VGDP GP I E E++ + V+ G K+ GG+R G + PTV
Sbjct: 295 VGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDE--GSFFPPTVLENDT 352
Query: 383 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 442
DM++ K+E+FGPV I K KD +E ++ +N+++YGL A VFT++++ A + R L G
Sbjct: 353 PDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGG 412
Query: 443 VWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
V IN F +PFGG+K+SG GRE Y++ + K +V
Sbjct: 413 VVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 278 bits (714), Expect = 1e-88
Identities = 150/457 (32%), Positives = 210/457 (45%), Gaps = 61/457 (13%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+P TG+V+ V + +V AV+ AR A W + R++ +LR+ L H D
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRA--WAALGVEGRAQRLLRWKRALADHAD 58
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPADGPYHVQTL-H 201
E+A L + GKP A EV + + A A ++ + + P T+ +
Sbjct: 59 ELAELLHAETGKPRA-DAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEY 117
Query: 202 EPIGVAGVL---------------------NIV----SGYGPTAGAALASHME------- 229
P GV GV+ N V S P G LA
Sbjct: 118 RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQG 177
Query: 230 -------------------VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270
VDK+AFTGS TG+ V+ AA+ L PV LELGGK P IV
Sbjct: 178 VLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMIVL 236
Query: 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330
DAD+++AA A + N GQ C + R +VHESVYD+FV + A A G G
Sbjct: 237 ADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGD 296
Query: 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 390
GP + Q + + +++ V GAK TGG R G + +PTV T V DM + ++
Sbjct: 297 ADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMRE 356
Query: 391 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 450
E FGPV ++ D DE I +N S+YGL+A VF+ +L A + R L G+V IN +
Sbjct: 357 ETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLL 416
Query: 451 FDA--AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
A+PFGG K SG GR G+ L + + KA+
Sbjct: 417 TAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 2e-87
Identities = 118/289 (40%), Positives = 148/289 (51%), Gaps = 62/289 (21%)
Query: 197 VQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 256
+ L E GV+N+V G G GAAL SH VDK++FTGST GK +++ AA+ NLKP
Sbjct: 139 AELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKP 197
Query: 257 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 316
VTLELGGKSP IV EDAD+D A E A + FFN GQ C A SR VHES
Sbjct: 198 VTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHES----------- 246
Query: 317 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 376
+ D F E+L T
Sbjct: 247 ------IYDEFV-----------------------------------EKLV--------T 257
Query: 377 VFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 436
V V DM IA++EIFGPV ++++KD +E I +N ++YGL AGVFT +L+ A +
Sbjct: 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAE 317
Query: 437 ALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
LR G+V+IN + PFGG K SG GRE G Y L Y + K VV
Sbjct: 318 RLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 7e-87
Identities = 156/472 (33%), Positives = 223/472 (47%), Gaps = 71/472 (15%)
Query: 72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSK 131
G++ D S +T L+P TG+ + + EDV+ A AA A E W ER++
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKE--WAATLPQERAE 58
Query: 132 IILRFADLLERHNDEI--------------AALETWDNGKPFEQSAQT--------EVPM 169
I+ + A +LE DEI A +E W + A T +P
Sbjct: 59 ILEKAAQILEERRDEIVEWLIRESGSTRIKANIE-WGAAMAITREAATFPLRMEGRILPS 117
Query: 170 TT-----RLFRYYAGWADKIQGLTAPADGPYHVQT------------------------- 199
R++R G + G+ +P + P H+
Sbjct: 118 DVPGKENRVYREPLG----VVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITG 173
Query: 200 ------LHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
+ E G+ GVLN+V G G G A H ++FTGST G+ + +LA +
Sbjct: 174 GLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR- 232
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
+LK V LELGG +PF+V EDAD+D A A + F +QGQ C A +R VHE VYD+FVE
Sbjct: 233 HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVE 292
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
K GDP GP I+ Q + +L I V+ GA L GGE A+G
Sbjct: 293 KFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE---AEGNV 349
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
++PTV + V +DM IA++EIFGPV I+K D +E ++ +N ++YGL+ VFT +L+
Sbjct: 350 LEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGV 409
Query: 433 TLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
R + G IN V D +PFGG K SG GR G ++L + K +
Sbjct: 410 QFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 269 bits (691), Expect = 4e-85
Identities = 156/481 (32%), Positives = 216/481 (44%), Gaps = 77/481 (16%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
LING++ +S SGKT P G+VI V A ++ A A A G WP M E
Sbjct: 5 LINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAG-RGWWPTMPLEE 62
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R + +FADLL+ + +E+A L W+ GK + A EV T R ++ G +
Sbjct: 63 RIDCLHKFADLLKENKEEVANLLMWEIGKTL-KDALKEVDRTIDYIRDTIEELKRLDGDS 121
Query: 189 APADGPYHVQTL-----HEPIGV------------------------------------- 206
P D + EP+GV
Sbjct: 122 LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGV 181
Query: 207 ----------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250
GV+N+V+G G G L +H +D ++FTGST G + +
Sbjct: 182 LLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP 241
Query: 251 KSNLKPVTLELGGKSPFIVCEDADVDKAA-ELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
K + LELGGK P IV DAD++ AA E+ AL ++ GQ C A R VHESV D+
Sbjct: 242 M---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESVADE 297
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369
VE K VG P+ G+ P ID + + + I V GA + GG R G
Sbjct: 298 LVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREG-- 355
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
G I PT+ V DM +A +E FGPV I++ D++E I+ +N S YGL A +FT +++
Sbjct: 356 GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDIN 415
Query: 430 TANTLMRALRVGSVWINCF-----DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
A L AL VG+V IN D F PF G K SG G + +L + + K +V
Sbjct: 416 KARKLADALEVGTVNINSKCQRGPDHF----PFLGRKDSGIGTQGIGDALRSMTRRKGIV 471
Query: 485 T 485
Sbjct: 472 I 472
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 267 bits (686), Expect = 8e-85
Identities = 143/440 (32%), Positives = 202/440 (45%), Gaps = 70/440 (15%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
D ++AV AA AF W + ER I+L+ ADLLE DE + G A
Sbjct: 1 DADQAVEAAAAAFPA--WSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWA 57
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----------------------GPYH---- 196
V + + R A +I G + P+D P
Sbjct: 58 GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117
Query: 197 ---------------------------VQTLHEPIGV-AGVLNIVSGY---GPTAGAALA 225
+ HE G+ GVLN+V+ P AL
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEA-GLPKGVLNVVTHSPEDAPEVVEALI 176
Query: 226 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 285
+H V K+ FTGST G+I+ + AAK +LKPV LELGGK+P IV EDAD+D AA A +
Sbjct: 177 AHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFG 235
Query: 286 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 345
F N GQ C + R VHES+ D+FVEK +K F G + G + + +++
Sbjct: 236 AFLNSGQICMSTERIIVHESIADEFVEK-----LKAAAEKLFAGPVVLGSLVSAAAADRV 290
Query: 346 LKYIRSGVDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404
+ + + GAKL GG G + PT+ V DM I +E FGPV SI++ KD
Sbjct: 291 KELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKD 350
Query: 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQS 463
+E ++ +N S+YGL+A VFT +L A + + + G+V IN V D +P GG K S
Sbjct: 351 EEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSS 410
Query: 464 GQGREKGSYSLSNYLQVKAV 483
G GR G + + + + K +
Sbjct: 411 GYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 266 bits (682), Expect = 5e-84
Identities = 148/459 (32%), Positives = 225/459 (49%), Gaps = 64/459 (13%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++DP TG+VI A+G + A++AAR+AFDE W R++++L AD E +
Sbjct: 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANA 59
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEP 203
+ +A L +NGK + A+ E+ RYYAG A G P G + + L EP
Sbjct: 60 ERLARLLALENGKILGE-ARFEISGAISELRYYAGLARTEAGRMIEPEPGSFSL-VLREP 117
Query: 204 IGVAGVL-----------------------NIVSGYGPTA-------------------- 220
+GVAG++ +V G TA
Sbjct: 118 MGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGV 177
Query: 221 -------GAALASHM----EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 269
G+ A+H+ +VD ++FTGST TG+ + AA LK + LELGGK+P IV
Sbjct: 178 VNLFTESGSEGAAHLVASPDVDVISFTGSTATGR-AIMAAAAPTLKRLGLELGGKTPCIV 236
Query: 270 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK-ANALAMKRVVGDPFK 328
+DAD+D A AL GQ C AGSR V S+ D+ ++ A LA + VG
Sbjct: 237 FDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVK-VGPGLD 295
Query: 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDM 385
GP ID +++ + + + GA++ G + AKG +++PT+ D
Sbjct: 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDA 355
Query: 386 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 445
I ++EIFGPV ++ + D E + +N + YGLAA V+T +L A + RA+R G+VWI
Sbjct: 356 DIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWI 415
Query: 446 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
N ++ A GGY+QSG GR G +L ++++ K +
Sbjct: 416 NDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 261 bits (670), Expect = 2e-81
Identities = 145/483 (30%), Positives = 218/483 (45%), Gaps = 78/483 (16%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ + + +++P +V+ V++ E +A+ AA +AF+ W + +
Sbjct: 39 LIIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFET--WKKWSP 94
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA----GWAD 182
+R++I+LR A ++ R E +A + GKP+ + A + YYA AD
Sbjct: 95 EDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAE-ADADTAEAIDFLEYYARQMLKLAD 153
Query: 183 KIQGLTAPADGPYHVQTLHEPIGV------------------------------------ 206
+ P + H + + P+GV
Sbjct: 154 GKPVESRPGE---HNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDT 210
Query: 207 -----------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
AGV+N V G G G L H + + FTGS G + + A
Sbjct: 211 PVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270
Query: 250 AKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 304
AK LK V E+GGK +V EDAD+D AAE + F GQ C A SR VHE
Sbjct: 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHE 330
Query: 305 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 364
VYD+ +EK L + VG+P GP I+ F+KI+ YI G + G +L GGE
Sbjct: 331 DVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEEG-RLVLGGE 388
Query: 365 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424
+KGY+I+PT+F V I ++EIFGPV + +K KD D ++ +N ++YGL V
Sbjct: 389 GDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVI 448
Query: 425 THNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS--YSLSNYLQV 480
++N + R VG+++ N C PFGG+ SG + G Y L +LQ
Sbjct: 449 SNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDY-LLLFLQA 507
Query: 481 KAV 483
K V
Sbjct: 508 KTV 510
|
Length = 514 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 4e-81
Identities = 149/469 (31%), Positives = 236/469 (50%), Gaps = 58/469 (12%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +TA
Sbjct: 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 69
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ R+ +L+ H D++A L T + GKP + A+ E+ ++A +I G
Sbjct: 70 KERANILRRWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 128
Query: 187 LTAPADGP-YHVQTLHEPIGV--------------------------------------- 206
T P + + +PIGV
Sbjct: 129 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 188
Query: 207 --------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
AGV N+V+G G L S+ V KL+FTGST G+ +++ AK
Sbjct: 189 ALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 247
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F E
Sbjct: 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 307
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 372
K K +GD + G+ GP ID + K+ ++I ++ GA++ GG+ G +
Sbjct: 308 KLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNF 367
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
+PT+ V + +AK+E FGP+ + ++KD +VI ++N +++GLAA + +L
Sbjct: 368 FQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVF 427
Query: 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481
+ AL G V IN + + PFGG K SG GRE Y + +YL++K
Sbjct: 428 RVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 3e-80
Identities = 155/483 (32%), Positives = 219/483 (45%), Gaps = 90/483 (18%)
Query: 75 VDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
VD A+G T P TG+ + V A DV A + AR A + W ER+ ++L
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTE---VPMTTRLFRYYAGWADKIQGLTAPA 191
RF DL+ + +E+ L + GK + A E V +T R YY A + L AP
Sbjct: 84 RFHDLVLENREELLDLVQLETGKA-RRHAFEEVLDVALTAR---YY---ARRAPKLLAPR 136
Query: 192 D--GPYHVQT----LHEPIGV--------------------------------------- 206
G V T L +P GV
Sbjct: 137 RRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT 196
Query: 207 --------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
+ +V+G GP G AL + D L FTGST TG+++ + A
Sbjct: 197 ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-R 253
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
L +LELGGK+P IV +DAD+DKAA A A F N GQ C + R +VHES+YD+FV
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVR 313
Query: 313 K--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LG 367
A AM+ +G + G I Q E + ++ V GA + GG+ LG
Sbjct: 314 AFVAAVRAMR--LGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG 371
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+ +PTV TGV DM +A++E FGPV S+ D+DE ++R+N + YGL A V+T +
Sbjct: 372 P--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGD 429
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAA-----IPFGGYKQSGQGREKGSYSLSNYLQVKA 482
+ +R G+V +N + + AA P GG K SG GR G+ L Y + +
Sbjct: 430 TARGRAIAARIRAGTVNVN--EGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQT 487
Query: 483 VVT 485
+ T
Sbjct: 488 IAT 490
|
Length = 524 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 254 bits (649), Expect = 5e-79
Identities = 157/475 (33%), Positives = 229/475 (48%), Gaps = 64/475 (13%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+LLING+ V G+ P +P TG+VI +AE AE V+ AV AA AF E W + T
Sbjct: 3 KLLINGELVS-GEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R++ +L+ AD++E + A LE+ + GKP E+P +FR++AG A + G
Sbjct: 60 KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119
Query: 187 LTAPADGPY---HVQTLH-EPIGV------------------------------------ 206
L A G Y H + +P+GV
Sbjct: 120 LAA---GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 176
Query: 207 ----------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250
AGV+NI+ G G T G L H +V ++ TGS TG+ +L A
Sbjct: 177 PLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236
Query: 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 310
S +K +ELGGK+P IV +DAD+D E F+N GQ C A R + +YD
Sbjct: 237 PS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTL 295
Query: 311 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAK 369
VEK A G P + GP E+++K + + G K+ TGGE+
Sbjct: 296 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGN 355
Query: 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
GYY PT+ G K D I + E+FGPV SI + D ++V+ +N SQYGLA+ V+T ++
Sbjct: 356 GYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVG 415
Query: 430 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
A+ L L+ G W+N + + +P GG K SG G++ Y L +Y V+ ++
Sbjct: 416 RAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 2e-75
Identities = 147/457 (32%), Positives = 210/457 (45%), Gaps = 68/457 (14%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
+P G+VI V + D A++ AR + + +ER I+ R ADLL++ +E
Sbjct: 5 NPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKRAEE 62
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-----TLH 201
A + + GKP + A+ EV R A A++I+G P D T+
Sbjct: 63 FAKIIACEGGKPIKD-ARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIR 121
Query: 202 EPIGVAG----------------------------------------------------- 208
EP+GV
Sbjct: 122 EPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEG 181
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268
VL +V+G G A A+ V L+FTGS G+ L A + K + LELGG +P I
Sbjct: 182 VLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGE---ALRANAGGKRIALELGGNAPVI 238
Query: 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328
V DAD+D A E F++ GQ C + R +VHE +YD+F+E A K VGDP
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 388
GP I E E++ +++ V+ GA+L GGER GA KPTV V D ++
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGA---LFKPTVLEDVPRDTKLS 355
Query: 389 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 448
+E FGPV I++Y D +E I+ +N++ YGL AG+FT +L+ A L VG V +N
Sbjct: 356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDS 415
Query: 449 DVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
F +PFGG K+SG GRE Y++ + K VV
Sbjct: 416 SAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 242 bits (620), Expect = 7e-75
Identities = 134/454 (29%), Positives = 184/454 (40%), Gaps = 64/454 (14%)
Query: 88 PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
P G VI E V A+ AR A W + ER I+ R +LL + DEI
Sbjct: 3 PIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGV 206
A TW G+P Q+ E+ RY A++ + + P + EP+GV
Sbjct: 61 AEELTWQMGRPIAQAGG-EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGV 119
Query: 207 AGVLNI------------------VSG----YGPTAGAALASHMEV-------------- 230
VL I ++G + L
Sbjct: 120 --VLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQ 177
Query: 231 ------------------DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 272
D ++FTGS G+ + Q AA V LELGGK P V D
Sbjct: 178 VLHLSHETSAALIADPRIDHVSFTGSVAGGRAI-QRAAAGRFIKVGLELGGKDPAYVRPD 236
Query: 273 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332
AD+D AAE FFN GQ CC+ R +VHES+YD FVE A+ +GDP
Sbjct: 237 ADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTT 296
Query: 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAK 389
GP + + + + I + GA+ G A G Y+ PTV T V M + +
Sbjct: 297 LGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMR 356
Query: 390 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 449
+E FGPV I+K K E I N S+YGL A V+T ++ A L L G+V++N D
Sbjct: 357 EETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCD 416
Query: 450 VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
D A+ + G K SG+G + K+
Sbjct: 417 YLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 4e-73
Identities = 108/257 (42%), Positives = 131/257 (50%), Gaps = 58/257 (22%)
Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
AAR AF W + ER+ I+ + ADLLE +E+AALET + GKP + A EV
Sbjct: 2 AARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARA 58
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGV-------------------- 209
FRY AG ADK+ G P+ P EP+GV GV
Sbjct: 59 IDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118
Query: 210 ---------------------------------LNIVSGYGPTAGAALASHMEVDKLAFT 236
+N+V G G GAAL SH VDK++FT
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFT 178
Query: 237 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 296
GST GK +++ AA+ NLKPVTLELGGKSP IV EDAD+D A E A + FFN GQ C A
Sbjct: 179 GSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237
Query: 297 GSRTFVHESVYDQFVEK 313
SR VHES+YD+FVEK
Sbjct: 238 ASRLLVHESIYDEFVEK 254
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 4e-73
Identities = 144/459 (31%), Positives = 204/459 (44%), Gaps = 72/459 (15%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+P TG+V+ V G E + A++ A +T Y+RS I+ + A LLE +
Sbjct: 4 RNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEARRE 58
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTL 200
E A L T ++G + + EV + R+ A A + G + D + TL
Sbjct: 59 EFARLITLESGLCL-KDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTL 117
Query: 201 HEPIG-VAGV------LNIV------------------SGYGPTAGAALA---------- 225
EP+G V + LN V S P + LA
Sbjct: 118 REPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPP 177
Query: 226 ------------------SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267
+H +VD + FTG GK + AA + K LELGG P
Sbjct: 178 DMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGNDPL 234
Query: 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327
IV +DAD+++AA LA + N GQ C A R VHESV D+FV+ + VVGDP
Sbjct: 235 IVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294
Query: 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 387
G ID E +I + + GA++ G +R GA PTV V D +
Sbjct: 295 DPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGA---LYAPTVLDHVPPDAEL 351
Query: 388 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 447
+E FGPV +++ KDLDE I SN++ YGL++GV T++LDT L+ L VG+V +N
Sbjct: 352 VTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNE 411
Query: 448 FDVFDAA-IPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 484
F + PFGG K SG G +E ++ VK
Sbjct: 412 VPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 236 bits (603), Expect = 6e-73
Identities = 123/396 (31%), Positives = 190/396 (47%), Gaps = 61/396 (15%)
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEP 203
EI+AL + GK +Q A+ EV T Y A WA + +G +D P ++
Sbjct: 13 SEISALIVEEGGKI-QQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRA 71
Query: 204 IGV-----------------------------------------------------AGVL 210
+GV GV
Sbjct: 72 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVF 131
Query: 211 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270
N+V G G T G LA + +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV
Sbjct: 132 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVM 190
Query: 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKG 329
+DAD+D A + + N GQ C R +V + +YDQFV + AM+ V G+P +
Sbjct: 191 DDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQAVQFGNPAER 249
Query: 330 G-IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 388
I GP I++ E++ + + V+ GA++ GG+ + KGYY PT+ V+ +M I
Sbjct: 250 NDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIM 309
Query: 389 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 448
+E FGPV ++ + L+E I +N S YGL + ++T NL+ A ++ L+ G +IN
Sbjct: 310 HEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN-R 368
Query: 449 DVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAV 483
+ F+A F G+++SG G G + L YLQ + V
Sbjct: 369 ENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 2e-72
Identities = 139/478 (29%), Positives = 207/478 (43%), Gaps = 95/478 (19%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
DP TG + V EDV+ A++AAR A E W + + ER K++ + + +E
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEE 59
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-------PADGPYHVQT 199
I + D GK ++ E+ + T +KI+ P P +
Sbjct: 60 ICRVACRDTGKTMVDASLGEI-LVT---------CEKIRWTLKHGEKALRPESRPGGLLM 109
Query: 200 LH-------EPIGVAGVL--------NIVS------------------------------ 214
+ EP+GV G + N++
Sbjct: 110 FYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSI 169
Query: 215 --------GYGP----------TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 256
G+ P AL SH +D + F GS GK V+ AA+S L P
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LTP 228
Query: 257 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 316
V LELGGK P IV +DAD+D+ A + F + GQ C R VHE +YD+ +E
Sbjct: 229 VVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTD 288
Query: 317 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGYY 372
G P G + G I +F+++ + + V+ GA+L GG+R +G+Y
Sbjct: 289 RVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHY 348
Query: 373 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432
PT+ V DM IA++E+FGPV ++K D +E ++ +N+++YGL A VF ++ A
Sbjct: 349 FPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRAR 408
Query: 433 TLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR---EKGSYSLSNYLQVKAVVT 485
+ L G V IN F V +PFGG K SG GR E+G L N K+V
Sbjct: 409 RIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCN---PKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 235 bits (601), Expect = 4e-72
Identities = 105/261 (40%), Positives = 146/261 (55%), Gaps = 6/261 (2%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
AGVL+++ G G AG AL V ++FTGST G+ V + A + +LK V+LELGGK+
Sbjct: 168 AGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNA 225
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
IV +DAD+D AA + F +QGQ C A R VHESV D + K A A VGDP
Sbjct: 226 LIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDP 285
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 386
G + GP I++ Q +++ + V GA+LE GG G + +PTV +GVK M
Sbjct: 286 ATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMP 342
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 446
+EIFGPV + + +E + +N ++YGL+AG+ + ++ A L LR G + IN
Sbjct: 343 AFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHIN 402
Query: 447 CFDVFDAAI-PFGGYKQSGQG 466
V D PFGG SG G
Sbjct: 403 DQTVNDEPHNPFGGMGASGNG 423
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 3e-70
Identities = 101/283 (35%), Positives = 144/283 (50%), Gaps = 9/283 (3%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
GV+N+V+G G G L V ++FTGST G+ V + A+ V LELGG +
Sbjct: 194 PGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVARRF-GRVLLELGGNNA 251
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
IV +DAD+D A +A GQ C R VHESVYD+F+E+ + +GDP
Sbjct: 252 IIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDP 311
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGVKDD 384
G GP I+ EK L I G + TGG+R+ G G Y++PT+ TGV DD
Sbjct: 312 LDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDD 371
Query: 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV--GS 442
I ++E F P+ ++K+ L+E I +N GL++ +FT +L A + G
Sbjct: 372 ARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGI 431
Query: 443 VWINCFDVFDAAI--PFGGYKQSGQGREKGSYSLSNYLQVKAV 483
V +N A I FGG K++G GRE GS + Y++
Sbjct: 432 VNVN-IPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 217 bits (553), Expect = 1e-64
Identities = 143/479 (29%), Positives = 221/479 (46%), Gaps = 69/479 (14%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L+ING+ V++ K +V+ V++ E A+ AA KAF+ W +
Sbjct: 35 LVINGERVETE-NKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEA--WKKTDPE 91
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--Q 185
ER+ I+ + A ++ R E +AL + GKP+ + A EV YYA ++
Sbjct: 92 ERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNE-ADAEVAEAIDFMEYYARQMIELAKG 150
Query: 186 GLTAPADGPYHVQTLHEPIGVAGVLN----------------IVSG-------------- 215
+G + Q ++ P GV V++ IV+G
Sbjct: 151 KPVNSREGETN-QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVI 209
Query: 216 -------------------YGPTAGAALASHM----EVDKLAFTGSTTTGKIVLQLAAK- 251
+ P +G+ + ++ + + FTGS G + + AAK
Sbjct: 210 AAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKV 269
Query: 252 ----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
+LK V E+GGK IV EDAD++ AA+ A + F GQ C AGSR VHE VY
Sbjct: 270 QPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVY 329
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
D+ VE+ + VG P + GP ID + F KI++YI G G +L +GG
Sbjct: 330 DEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDD 388
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+KGY+I PT+F V +A++EIFGPV + ++ D DE ++ +N ++YGL GV ++N
Sbjct: 389 SKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNN 448
Query: 428 LDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAV 483
D N VG+++ N PFGG+K SG + G L+ ++Q K V
Sbjct: 449 RDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 4e-63
Identities = 109/287 (37%), Positives = 151/287 (52%), Gaps = 15/287 (5%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
+ +V+G G G A+ + D + FTGST TG++V + A L +LELGGK+P
Sbjct: 175 RDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNP 231
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
IV EDAD+DKAA A A F N GQ C + R +VHESVYD+FV + A +G
Sbjct: 232 MIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAA 291
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LGAKGYYIKPTVFTGVKD 383
G G I Q +++ ++ V GA + GG LG Y+ +PTV TGV +
Sbjct: 292 LDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGP--YFYEPTVLTGVTE 349
Query: 384 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 443
DM + +E FGPV SI + D DE I+ +N + YGL A V+T + + LR G+V
Sbjct: 350 DMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTV 409
Query: 444 WINCFDVFDAA-----IPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
+N + + AA P GG K SG GR G+ L Y + + V
Sbjct: 410 NVN--EGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 2e-59
Identities = 107/283 (37%), Positives = 158/283 (55%), Gaps = 3/283 (1%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
GV+NIV+ GA LA VD ++FTGST TG+ V+ AA + LK V LELGGKS
Sbjct: 199 PGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAAT-LKKVFLELGGKSA 257
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
FIV +DAD+ A +A + + + GQ C +R V + YD+ V A A GDP
Sbjct: 258 FIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSIKPGDP 317
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDD 384
G GP I + Q +++ Y+ V G + GG R +G++++PTV G+ ++
Sbjct: 318 ADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFFVEPTVIAGLDNN 377
Query: 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 444
+A++EIFGPV +++ + D+ ++ +N S YGL+ VF + + A + +R G+V
Sbjct: 378 ARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTVN 437
Query: 445 INCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+N + A PFGGYKQSG GRE G YL+ K + TA
Sbjct: 438 VNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLIATAA 480
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 3e-59
Identities = 98/265 (36%), Positives = 136/265 (51%), Gaps = 7/265 (2%)
Query: 221 GAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 280
L + + L+FTGS G + A K K V LELGG + IV DAD+D AA+
Sbjct: 193 ADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGNAAVIVDSDADLDFAAQ 249
Query: 281 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 340
+ F+ GQ C + R VH SVYD+F + A GDP GP I
Sbjct: 250 RIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISES 309
Query: 341 QFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 400
+ E++ ++ VD GAKL TGG+R G ++PT+ V DM + +E+FGPV ++
Sbjct: 310 EAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVE 366
Query: 401 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGG 459
Y D DE + N S++GL AGVFT +L+ A L VG V IN F +P+GG
Sbjct: 367 PYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGG 426
Query: 460 YKQSGQGREKGSYSLSNYLQVKAVV 484
K SG GRE Y++ + + +V
Sbjct: 427 VKDSGIGREGVRYAIEEMTEPRLLV 451
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 8e-55
Identities = 101/244 (41%), Positives = 130/244 (53%), Gaps = 11/244 (4%)
Query: 235 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 294
FTGS GKIV+ AAK +L VTLELGGKSP IV E AD+ KAA+ + F N GQ C
Sbjct: 182 FTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTC 240
Query: 295 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYIR 350
A FVHESV D FVE A +++ G + P ++ F+++ +
Sbjct: 241 IAPDYVFVHESVKDAFVEHLKA-EIEKFYGK--DAARKASPDLARIVNDRHFDRLKGLLD 297
Query: 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
V GAK+E GG+ A YI PTV T V DM I ++EIFGPV I+ Y+DLDEVI+
Sbjct: 298 DAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIE 356
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGRE 468
NA LA VF+ + N ++ G V +N + +PFGG SG G
Sbjct: 357 YINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSY 416
Query: 469 KGSY 472
G Y
Sbjct: 417 HGVY 420
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 2e-54
Identities = 143/484 (29%), Positives = 224/484 (46%), Gaps = 76/484 (15%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G++VD+ ++ P +V+ A+ + + A+ AA AF W
Sbjct: 21 LVIGGEWVDTKERMV--SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKT--WKDWPQ 76
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R++++L+ ADLL R E+ A T++ GK + + A +V RYYA A +++
Sbjct: 77 EDRARLLLKAADLLRRRRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRY 135
Query: 187 --------------------------------------------------LTAPAD---- 192
+ PA+
Sbjct: 136 PAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVV 195
Query: 193 -GPYHVQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
G + HE GV+ + G G GA L H + + FTGS TGK + + AA+
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255
Query: 252 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
+ K + +E GGK+ IV E AD + E + F QGQ C A SR + +
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGA 315
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
Y+ +E+ A + VG P + G GP ID+EQ K+L YI G + G +L GG+RL
Sbjct: 316 YEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL 374
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD--EVIQRSNASQYGLAAGVF 424
+GY++ PTV V IA++EIFGPV S+++YKD D E ++ +N++ YGL GV+
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434
Query: 425 THNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQGREKGS-YSLSNYLQ 479
+ + R VG+++IN A+ PFGG+K SG + G + L +L+
Sbjct: 435 SRKREHLEEARREFHVGNLYIN--RKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLE 492
Query: 480 VKAV 483
+KAV
Sbjct: 493 MKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 180 bits (460), Expect = 1e-51
Identities = 85/261 (32%), Positives = 130/261 (49%), Gaps = 18/261 (6%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
D + FTGS GKIV++ AAK +L PVTLELGGKSP IV +DA+++ AA + F N
Sbjct: 178 DHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNA 236
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKIL 346
GQ C A VHES+ D+ +E +K+ + + + ++ P I+ F+++
Sbjct: 237 GQTCIAPDYVLVHESIKDELIE-----ELKKAIKEFYGEDPKESPDYGRIINERHFDRLA 291
Query: 347 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406
+ K+ GG+ + YI PT+ V D + ++EIFGP+ IL Y DLD
Sbjct: 292 SLL-----DDGKVVIGGQV-DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLD 345
Query: 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSG 464
E I+ N+ LA +F+ + ++ G V +N +PFGG SG
Sbjct: 346 EAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSG 405
Query: 465 QGREKGSYSLSNYLQVKAVVT 485
G G + +K+V+
Sbjct: 406 MGAYHGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 2e-50
Identities = 90/274 (32%), Positives = 135/274 (49%), Gaps = 31/274 (11%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
D + FTGS GKIV++ AAK +L PVTLELGGKSP IV EDA++ AA+ + F N
Sbjct: 178 DYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNA 236
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP---QIDSEQ-FEKIL 346
GQ C A VHESV ++F++ +K + + + P +I +E+ F+++
Sbjct: 237 GQTCVAPDYVLVHESVKEKFIK-----ELKEEIKKFYGEDPLESPDYGRIINEKHFDRLA 291
Query: 347 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406
+ +G K+ GG + YI+PT+ V D + ++EIFGP+ +L Y LD
Sbjct: 292 GLLDNG-----KIVFGGNT-DRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLD 345
Query: 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-------PFGG 459
E I+ + LA +F+ + ++ L G IN D + PFGG
Sbjct: 346 EAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIN-----DTIMHLANPYLPFGG 400
Query: 460 YKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 493
SG G G YS + K+++ K W
Sbjct: 401 VGNSGMGSYHGKYSFDTFSHKKSIL---KKSTWF 431
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 174 bits (444), Expect = 4e-49
Identities = 92/248 (37%), Positives = 129/248 (52%), Gaps = 1/248 (0%)
Query: 236 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 295
TGS G+ V +A +K LELGG PFIV AD+D+AAE A A N GQ C
Sbjct: 208 TGSEPAGRAVAAIAGDE-IKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCI 266
Query: 296 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 355
A R VH VYD F EK A VGDP GP + +++ K + V
Sbjct: 267 AAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAA 326
Query: 356 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 415
GA + GG+R G++ PTV T + DM + +E+FGPV S+ + D+DE I+ +NA+
Sbjct: 327 GATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANAT 386
Query: 416 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 475
+GL + +T + + L G V+IN V +PFGG K+SG GRE ++ +
Sbjct: 387 TFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIR 446
Query: 476 NYLQVKAV 483
+ +K V
Sbjct: 447 EFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 8e-49
Identities = 95/270 (35%), Positives = 129/270 (47%), Gaps = 23/270 (8%)
Query: 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271
+V+G G AA S + D L FTGST G+ V++ AA+ NL PVTLELGGKSP I+
Sbjct: 162 VVTG-GADVAAAF-SSLPFDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAP 218
Query: 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331
DAD+ KAAE + N GQ C A V E ++FV A A A+ ++ +
Sbjct: 219 DADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKA-AVAKMYPT-----L 272
Query: 332 QQGPQ----IDSEQFEKILKYIRSGVDGGAKLET---GGERLGAKGYYIKPTVFTGVKDD 384
P I+ + ++ + GA++ GE A + PT+ V DD
Sbjct: 273 ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATR-KLPPTLVLNVTDD 331
Query: 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 444
M + ++EIFGP+ IL Y LDE I NA LA F + + ++R G V
Sbjct: 332 MRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVT 391
Query: 445 INCFDV-FDAA---IPFGGYKQSGQGREKG 470
IN D A +PFGG SG G G
Sbjct: 392 IN--DTLLHVAQDDLPFGGVGASGMGAYHG 419
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 2e-48
Identities = 95/292 (32%), Positives = 134/292 (45%), Gaps = 28/292 (9%)
Query: 200 LHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 259
L + + ++V G G G AL V ++FTGST G+ V Q A L
Sbjct: 186 LEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRSLL 243
Query: 260 ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 319
ELGG + IV EDAD+D A +A GQ C R VHES+YD+ +E+ A
Sbjct: 244 ELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK-AY 302
Query: 320 KRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF 378
K+V +GDP G GP + L I G + GG+ + G Y++PT+
Sbjct: 303 KQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIV 362
Query: 379 TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 438
G+ D I K+E F P+ +LK+ L+E I +N GL++ +FT +L A +
Sbjct: 363 EGLS-DAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPK 421
Query: 439 RVGS----VWINCFDVFDAAIP---------FGGYKQSGQGREKGSYSLSNY 477
GS V +N I FGG K++G GRE GS + Y
Sbjct: 422 --GSDCGIVNVN--------IGTSGAEIGGAFGGEKETGGGRESGSDAWKQY 463
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 2e-47
Identities = 97/286 (33%), Positives = 139/286 (48%), Gaps = 22/286 (7%)
Query: 208 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267
+V G P A L DK+ +TGS G+I+ + AAK +L PVTLELGGKSP
Sbjct: 165 DAFQVVQGGVPETTALLEQKF--DKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPV 221
Query: 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327
IV ++AD++ AA+ + F N GQ C A V SVYD+FVE +K+V+ + +
Sbjct: 222 IVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVE-----ELKKVLDEFY 276
Query: 328 KGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 383
GG P ++ F ++ + + K+ GGE A +I PT+ + V
Sbjct: 277 PGGANASPDYTRIVNPRHFNRLKSLLDT---TKGKVVIGGEMDEAT-RFIPPTIVSDVSW 332
Query: 384 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 443
D + +E+FGPV I+K DLDE I+ N+ LA +FT + + ++ R G V
Sbjct: 333 DDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGV 392
Query: 444 WINCFDVFDAA----IPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
IN D PFGG SG G G Y + + VV
Sbjct: 393 VIN--DTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVVK 436
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 5e-47
Identities = 96/271 (35%), Positives = 127/271 (46%), Gaps = 19/271 (7%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
GVLN+V G G A AL H ++ ++F GST G+ + + AA + K V G K+
Sbjct: 193 DGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANG-KRVQALGGAKNH 250
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
+V DAD+++ A A F GQ C A S D+++ K A K VG
Sbjct: 251 AVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAG 310
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVK 382
G GP I E+I I SGV+ GAKL G + G ++ PT+ V
Sbjct: 311 DDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVT 370
Query: 383 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 442
DM I K+EIFGPV SI++ LDE I NA+ YG A +FT + A R + G
Sbjct: 371 PDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGM 430
Query: 443 VWINCFDVFDAAIP-------FGGYKQSGQG 466
V IN IP FGG+K S G
Sbjct: 431 VGIN------VPIPVPLAFFSFGGWKGSFFG 455
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 2e-46
Identities = 117/432 (27%), Positives = 181/432 (41%), Gaps = 76/432 (17%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
V+ AV+AAR AF W ++ ER+ I+ RFA+LL+ + +E+A L + + GKP + A
Sbjct: 1 QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWE-A 57
Query: 164 QTEVP-------MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGVL------ 210
QTEV ++ + + G + T A G ++ H P GV V
Sbjct: 58 QTEVAAMAGKIDISIKAYHERTG-----ERATPMAQGRAVLR--HRPHGVMAVFGPFNFP 110
Query: 211 ------NIV-------------SGYGPTAGAALA-------------------------- 225
+IV S P +
Sbjct: 111 GHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEAL 170
Query: 226 -SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 284
+H +D L FTGS TG ++ + A K + LE+GG +P +V + AD+D AA L
Sbjct: 171 AAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQ 230
Query: 285 ALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 343
+ F GQ C R V + V D F+E+ A + +G P GP I +
Sbjct: 231 SAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAA 290
Query: 344 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILK 401
+ L + + G + ERL A ++ P + T D + +EIFGP+ + +
Sbjct: 291 RYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVYR 347
Query: 402 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGY 460
Y D DE I +NA+++GL+AG+ + + + +R G V N + PFGG
Sbjct: 348 YDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGV 407
Query: 461 KQSGQGREKGSY 472
SG R Y
Sbjct: 408 GLSGNHRPSAYY 419
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 5e-46
Identities = 94/265 (35%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268
+L +V+G L ++ VD + FTG GK + AA++ + LELGG P I
Sbjct: 198 MLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI---AARAGYRRQVLELGGNDPLI 254
Query: 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328
V EDAD+D+AA+LA + N GQ C A R V ESV D+F E GDP
Sbjct: 255 VMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMD 314
Query: 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 388
+ G ID + + GA+L G R GA PTV V M +
Sbjct: 315 PSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGA---LYAPTVLDRVDPSMTLV 371
Query: 389 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 448
++E FGPV ++++ D+D+ I+ SN++ YGL++GV T+ LD + L+VG+V N +
Sbjct: 372 REETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTV--NVW 429
Query: 449 DVFDAAI---PFGGYKQSGQGREKG 470
+V + PFGG K SG G ++G
Sbjct: 430 EVPGYRLELTPFGGIKDSGLGYKEG 454
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 7e-45
Identities = 135/477 (28%), Positives = 189/477 (39%), Gaps = 104/477 (21%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHN 144
++P I V + +++A+ A F D W + A+ER I+ R ADL+E
Sbjct: 4 VNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEERA 61
Query: 145 DEIAALETWDNGKPF---------------------EQSAQTEVPMTTRLFRYYAGWADK 183
DE+A L + GKP Q E+PM
Sbjct: 62 DELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPM-------------- 107
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGV-------LN-IVSGYGPT---------------- 219
GLT + G T EPIGV LN IV P
Sbjct: 108 --GLTPASAGRI-AFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATP 164
Query: 220 ------------AG------------AALASHMEVDK----LAFTGSTTTGKIVLQLAAK 251
AG A+A + D +F GS G ++ +
Sbjct: 165 LSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWML-----R 219
Query: 252 SNLKPVT---LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
S L P T LE GG +P IV AD+D F++ GQ C + R FV + D
Sbjct: 220 SKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIAD 279
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368
F ++ A A K VVGDP + GP I + +++ +++ V GA+L GG+RL
Sbjct: 280 DFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSD 339
Query: 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428
Y PTV D ++ EIFGPV + Y DLDE I ++N+ A VFT +L
Sbjct: 340 TTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397
Query: 429 DTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
D A +R L +V +N F +PF G +QSG G Y++ + Q K V
Sbjct: 398 DVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 1e-44
Identities = 131/484 (27%), Positives = 200/484 (41%), Gaps = 96/484 (19%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ING+ ++ G P +DP I V+ +AEDV+ A++ A AF W
Sbjct: 36 IINGEETETGEGA--PVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG--WSATPVE 91
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER++I+ + ADLLE + E+ AL + GK A EV RYYA A ++
Sbjct: 92 ERAEILEKAADLLEANRGELIALAAAEAGKTLAD-ADAEVREAIDFCRYYAAQARELFSD 150
Query: 188 TAPADGPYHVQTLH-EPIGV---------------------------------------- 206
+ L GV
Sbjct: 151 PELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210
Query: 207 ---------AG----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKS 252
AG VL +V G G G AL +H +D + FTGST T K++ + LA +
Sbjct: 211 ARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERD 270
Query: 253 N-LKPVTLELGGKSPFIVCEDADVDKA-AELAHYALFFNQGQCCCAGSRTFVHESVYDQF 310
+ P+ E GGK+ IV A ++A ++ A F + GQ C A ++ E + ++F
Sbjct: 271 GPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEIAERF 329
Query: 311 VE--KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 366
+E K ++K VGDP+ GP ID + + + +L G L
Sbjct: 330 IEMLKGAMASLK--VGDPWDLSTDVGPLIDKPAGKLLRAHT--------ELMRGEAWLIA 379
Query: 367 -----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGL 419
GY++ P + V L E+FGP+ ++++K DLDE I+ NA+ YGL
Sbjct: 380 PAPLDDGNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGL 437
Query: 420 AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQGREKGSYSLS 475
G+ + + + G+++IN AI PFGG+ SG G + G
Sbjct: 438 TLGIHSRDEREIEYWRERVEAGNLYINRNIT--GAIVGRQPFGGWGLSGTGPKAGGP--- 492
Query: 476 NYLQ 479
NYL
Sbjct: 493 NYLL 496
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 2e-42
Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 8/256 (3%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
D + FTGS GK+V+Q AA+ NL P TLELGGKSP IV + ++ AA + F N
Sbjct: 187 DHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNA 245
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350
GQ C A VH S+ D+F+E A A+K G+ K ++ +++ + I+
Sbjct: 246 GQTCVAPDYVLVHRSIKDKFIE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK 304
Query: 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
D G K+ GGE + + Y+ PT+ D + ++EIFGP+ IL Y+++DEV++
Sbjct: 305 ---DHGGKVVYGGE-VDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLE 360
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGRE 468
N+ LA F + ++ G+V IN F + + +PFGG SG G
Sbjct: 361 FINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAY 420
Query: 469 KGSYSLSNYLQVKAVV 484
G Y + K V+
Sbjct: 421 HGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 3e-42
Identities = 130/485 (26%), Positives = 198/485 (40%), Gaps = 77/485 (15%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
I G+F + ASG P +P T +V T VA ++V+ AV++AR+ F W + +
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R+ ++LR+ LL+ H DEIA L T ++GK A +V + + G ++G
Sbjct: 60 AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHS-DALGDVARGLEVVEHACGVNSLLKG 118
Query: 187 LTAPADGP-YHVQTLHEPIGV-AGV---------------LNIVSGYG---------PTA 220
T+ V ++ +P+GV AG+ + I G P+A
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178
Query: 221 GAALAS---------------------------HMEVDKLAFTGSTTTGKIVLQLAAKSN 253
LA H +V ++F GST G+ + +
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHG 238
Query: 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313
K V G K+ +V DAD D AA+ A + GQ C A S V D++V +
Sbjct: 239 -KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVPE 296
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-- 371
A K +G G + GP I + +++ I G GA++ G GY
Sbjct: 297 IRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEE 356
Query: 372 --YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
++ PT+ V M ++EIFGPV +L+ L+E I NAS YG +FT +
Sbjct: 357 GNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGA 416
Query: 430 TANTLMRALRVGSVWINCFDVFDAAIP-------FGGYKQS--GQGREKGSYSLSNYLQV 480
A + VG V +N IP F G+K S G G Y +
Sbjct: 417 AARRFQHEIEVGQVGVN------VPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRG 470
Query: 481 KAVVT 485
K V T
Sbjct: 471 KTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 4e-42
Identities = 91/247 (36%), Positives = 124/247 (50%), Gaps = 14/247 (5%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
D + +TGST+ GKIV+Q AAK +L PVTLELGGKSP V + D+D AA + F N
Sbjct: 178 DYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350
GQ C A V ++FVE +K G+ K G I+ F+++ K +
Sbjct: 237 GQTCIAPDYVLCTPEVQEKFVEALKK-TLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS 295
Query: 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
G K+ GG+ K YI PTV T VK + ++EIFGP+ I+ +LDE I+
Sbjct: 296 GG-----KVAIGGQ-TDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIE 349
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQG 466
N+ + LA VF++N N ++ G V +N D PFGG SG G
Sbjct: 350 FINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN--DTIMHYTLDSLPFGGVGNSGMG 407
Query: 467 REKGSYS 473
G YS
Sbjct: 408 AYHGKYS 414
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 3e-41
Identities = 84/248 (33%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 236 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 295
TGS G + A + LK LELGG PFIV DAD++ A + A + N GQ C
Sbjct: 211 TGSVRAGAAIGAQAGAA-LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCA 269
Query: 296 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 355
A R + E + F E+ A A +GDP GP + +++ + + +
Sbjct: 270 AAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAE 329
Query: 356 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 415
GA+L GGE++ G Y PTV V +M ++E+FGPV +I KD + ++ +N S
Sbjct: 330 GARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDS 389
Query: 416 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLS 475
++GL+A +FT + A + L G V+IN + DA + FGG K+SG GRE + L
Sbjct: 390 EFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLH 449
Query: 476 NYLQVKAV 483
+ ++ V
Sbjct: 450 EFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 154 bits (390), Expect = 3e-40
Identities = 134/463 (28%), Positives = 197/463 (42%), Gaps = 64/463 (13%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
++NG V A G+ P ++P D++ V E DV +A+ AA A W
Sbjct: 117 IVNGAPV--AGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPI--WSATPPA 172
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER+ I+ R ADL+E ++ L + GK +A EV RYYAG A D
Sbjct: 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTL-SNAIAEVREAVDFLRYYAGQARDTFGN 231
Query: 187 LTAPADGP-----------------------------------------YHVQTLHEPIG 205
LT GP V+ LHE G
Sbjct: 232 LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEA-G 290
Query: 206 V-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL--ELG 262
V GVL ++ G G T GAAL + V + FTGST +++ + AK +P+ L E G
Sbjct: 291 VPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETG 350
Query: 263 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322
G++ IV A ++ + F + GQ C A + E V D+ + +
Sbjct: 351 GQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELR 410
Query: 323 VGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 381
VG+P + GP ID+E I K+I G + KG ++ PT+
Sbjct: 411 VGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELE 470
Query: 382 KDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR 439
D L + E+FGPV +++YK +LDEVI + NA+ YGL GV T +T +
Sbjct: 471 NLDEL--QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAH 528
Query: 440 VGSVWINCFDVFDAAI---PFGGYKQSGQGREKGSYSLSNYLQ 479
G++++N ++ A + PFGG SG G + G YL
Sbjct: 529 AGNLYVN-RNIVGAVVGVQPFGGEGLSGTGPKAGG---PLYLL 567
|
Length = 769 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 7e-40
Identities = 123/467 (26%), Positives = 192/467 (41%), Gaps = 62/467 (13%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+I + + P +P D++ V V A+ +A++AF W A
Sbjct: 41 IIGHSYKADGEAQ--PVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPT--WNATPAK 96
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER+ + R ADLLE H E+ AL + GK +A EV RYYA D +
Sbjct: 97 ERAAKLDRLADLLELHMPELMALCVREAGKTI-HNAIAEVREAVDFCRYYAKQVRDVLGE 155
Query: 187 LTAPADGP-----------------------------------------YHVQTLHEPIG 205
+ + G V+ + E
Sbjct: 156 FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGF 215
Query: 206 VAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL--ELGG 263
AG + ++ G G GAAL S + +AFTGST +++ Q A+ PV L E GG
Sbjct: 216 PAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGG 275
Query: 264 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323
++ IV A ++ + F + GQ C A V E V D+ + + V
Sbjct: 276 QNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKV 335
Query: 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG---AKLETGGERLGAKGYYIKPTVFTG 380
G P GP ID+E + +L +I A+L R G ++ PT+F
Sbjct: 336 GVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFE- 394
Query: 381 VKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 438
DD+ +E+FGPV +++YK +LD+++ + N + YGL GV + T + +
Sbjct: 395 -LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHA 453
Query: 439 RVGSVWINCFDVFDAAI---PFGGYKQSGQG-REKGSYSLSNYLQVK 481
RVG+ ++N + A + PFGG SG G + G + L QV+
Sbjct: 454 RVGNCYVN-RNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 4e-37
Identities = 142/519 (27%), Positives = 212/519 (40%), Gaps = 103/519 (19%)
Query: 51 AAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVS 110
A + D + +G++ S+SGK+ +P T V E+VN+A+
Sbjct: 1 MAGTGFFAEILDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAME 60
Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
+A+ A + W + ++R++++ + A +L+ H IA + KP + A TEV +
Sbjct: 61 SAKAA--QKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVVRS 117
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQ-------------TLHEPIGVAGVLNI----- 212
L Y A +G+ +G + V T P+GV VL I
Sbjct: 118 GDLISYTAE-----EGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGV--VLAIPPFNY 170
Query: 213 -----VSGYGP-------------TAGAALASHM-------------------------- 228
VS P T GA A HM
Sbjct: 171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGD 230
Query: 229 ------EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 282
V+ ++FTG T + ++ K+ + P+ +ELGGK IV EDAD+D AA
Sbjct: 231 FLTMHPGVNCISFTGGDTG----IAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANI 286
Query: 283 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 342
F GQ C A V ESV D VEK NA K VG P + I
Sbjct: 287 IKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP-----EDDCDITPVVS 341
Query: 343 EKILKYIRSGVDG----GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 398
E +I V GA +R +G I P + V+ DM IA +E FGPV
Sbjct: 342 ESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLP 398
Query: 399 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-----DVFDA 453
+++ ++E I NAS +GL VFT +++ A + A+ G+V IN D F
Sbjct: 399 VIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHF-- 456
Query: 454 AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAW 492
PF G K SG G + + S++ +VK+ V L P++
Sbjct: 457 --PFQGLKDSGIGSQGITNSINMMTKVKSTVINLPKPSY 493
|
Length = 496 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 3e-36
Identities = 123/474 (25%), Positives = 203/474 (42%), Gaps = 89/474 (18%)
Query: 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVN---RAVSAARKAFDEGPWPRMTAYERSKIIL 134
A+G +++P I V E ED RA A K W ++ A +R +I+
Sbjct: 31 ANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKI-----WMQVPAPKRGEIVR 85
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
+ D L D + L + + GK + EV + + G + ++ G P++ P
Sbjct: 86 QIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERP 144
Query: 195 YHVQT-LHEPIGVAGVL---------------------NIVSGYG-PT------------ 219
H+ + P+G+ GV+ N V G PT
Sbjct: 145 NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLV 204
Query: 220 ------------------AGAALASHMEVDK----LAFTGSTTTGKIVLQLAAKSNLKPV 257
GA + + D ++FTGS+ G +V Q +
Sbjct: 205 AEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMV-QQTVNARFGKC 263
Query: 258 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 317
LEL G + IV +DAD+ A +A GQ C R +HES+YD +E+ +
Sbjct: 264 LLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTV 323
Query: 318 AMKRVVGDPFKGGIQQGP---QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 374
+ +GDP + G GP + FEK ++ I+S G K+ TGG + ++G +++
Sbjct: 324 YKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS---QGGKILTGGSAIESEGNFVQ 380
Query: 375 PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTL 434
PT+ + D + K+E+FGPV ++K+K L+E I+ +N+ GL++ +FT N +T
Sbjct: 381 PTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKW 439
Query: 435 MRALRVGSVWINCFDVFDAAIP---------FGGYKQSGQGREKGSYSLSNYLQ 479
+G + +C + + IP FGG K +G GRE GS S Y++
Sbjct: 440 -----IGPLGSDC-GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 134 bits (338), Expect = 6e-34
Identities = 128/475 (26%), Positives = 185/475 (38%), Gaps = 76/475 (16%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ V + SG+ + P V+ E N+AV AA A E W +
Sbjct: 34 LVIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKE--WSLLPF 90
Query: 127 YERSKIILRFADLLE---RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
Y+R+ I L+ ADLL R EI A K Q+ V FR+ A +A +
Sbjct: 91 YDRAAIFLKAADLLSGPYRA--EILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARE 148
Query: 184 IQG-------------------------------------LTAPA--------------- 191
+ APA
Sbjct: 149 LYEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALMGNTVIWKPSDTAM 208
Query: 192 DGPYHVQTLHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKIV 245
Y V + E G+ GV+N V G GP + + ++ + FTGST T ++
Sbjct: 209 LSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVA 268
Query: 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 305
L N + E GGK +V ADV+ F QGQ C A SR +V S
Sbjct: 269 QNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHS 328
Query: 306 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET--GG 363
++ +F + A + VGDP G G ID + F KI+KYI + L GG
Sbjct: 329 LWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGG 388
Query: 364 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQR-SNASQYGLA 420
+ + GY+++PTV + K+EIFGPV ++ Y D E++ + + YGL
Sbjct: 389 KYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLT 448
Query: 421 AGVFTHNLDTANTLMRALR--VGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS 471
VF + D + LR G+ +IN PFGG + SG + G
Sbjct: 449 GAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGG 503
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 6e-34
Identities = 136/465 (29%), Positives = 198/465 (42%), Gaps = 103/465 (22%)
Query: 76 DSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
G T P L+P DV+ V E AEDV RA++AA+ AF E W A ER+ I+
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILE 619
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-QGLTAPADG 193
R ADL+E H E+ AL + GK +A EV RYYA A ++ G G
Sbjct: 620 RAADLMEAHMPELFALAVREAGKTL-ANAIAEVREAVDFLRYYAAQARRLLNGPGHKPLG 678
Query: 194 P-----------------------------------------YHVQTLHEPIGV-AGVLN 211
P V+ LHE GV L
Sbjct: 679 PVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHE-AGVPKDALQ 737
Query: 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL--ELGGKSPFIV 269
++ G G T GAAL + + + FTGST +++ + AK + PV L E GG++ IV
Sbjct: 738 LLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIV 797
Query: 270 CED---------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL--A 318
D ADV +A F + GQ C A + E V D+ + L A
Sbjct: 798 --DSSALPEQVVADVIASA-------FDSAGQRCSALRVLCLQEDVADRVLT---MLKGA 845
Query: 319 MK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--------GAK 369
M +GDP++ GP ID+E I +I + G + K
Sbjct: 846 MDELRIGDPWRLSTDVGPVIDAEAQANIEAHI-------EAMRAAGRLVHQLPLPAETEK 898
Query: 370 GYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFT 425
G ++ PT+ + D+ + E+FGPV ++++K +LD VI NA+ YGL G+ +
Sbjct: 899 GTFVAPTLIE-IDSISDL---EREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHS 954
Query: 426 HNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQG 466
+T + +R G++++N + A+ PFGG SG G
Sbjct: 955 RIDETIAHVTSRIRAGNIYVNRNII--GAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 2e-31
Identities = 146/543 (26%), Positives = 223/543 (41%), Gaps = 78/543 (14%)
Query: 11 SRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLI 70
S S T+++ T+ R ++L R + S S++ + P PP + LI
Sbjct: 64 SSSTTTTTTTMLLRISGNNL-RPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPN----LI 118
Query: 71 NGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
G FV+S S ++P T +V++ V E+ AVSAA++AF W R
Sbjct: 119 GGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL--WRNTPITTRQ 176
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
+++L+F +L+ ++ D++A T + GK + S ++ + + G A G P
Sbjct: 177 RVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEYLP 235
Query: 191 -ADGPYHVQTLHEPIGV-AGV--------------------------------------- 209
++ EP+GV AG+
Sbjct: 236 NVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVIL 295
Query: 210 -------------LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 256
LNIV G T A+ ++ ++F GS T G + AA K
Sbjct: 296 AELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KR 353
Query: 257 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHE--SVYDQFVEK 313
+ +G K+ +V DA++D A F GQ C A S FV + S D+ VE+
Sbjct: 354 IQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVER 413
Query: 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-- 371
A AL K G + GP I + E+I + I+SGVD GAKL G + GY
Sbjct: 414 AKAL--KVTCGSEPDADL--GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEK 469
Query: 372 --YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
+I PT+ +GV DM K+EIFGPV ++ DE I N ++YG A +FT +
Sbjct: 470 GNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGA 529
Query: 430 TANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREK--GSYSLSNYLQVKAVVTA 486
A + G + IN V F G K S G G + + Q+K V
Sbjct: 530 AARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQK 589
Query: 487 LKN 489
K+
Sbjct: 590 QKD 592
|
Length = 604 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 2e-30
Identities = 89/290 (30%), Positives = 130/290 (44%), Gaps = 24/290 (8%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKIVLQLAAKSNLKPVTLEL 261
GV+N V G GP G + + + L FTGST T +I L + E
Sbjct: 226 PGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGET 285
Query: 262 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 321
GGK+ +V ADVD F QGQ C A SR +V ES++ + E+ +
Sbjct: 286 GGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI 345
Query: 322 VVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKGYYIKPTVF-- 378
+GDP G ID + F++I YI + D A++ GG+ + GY+++PTV
Sbjct: 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIET 405
Query: 379 TGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQR-SNASQYGLAAGVFTHNLDTANTLM 435
T K ++ +EIFGPV ++ Y D +E ++ S Y L +F +
Sbjct: 406 TDPKHKLM--TEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREAT 463
Query: 436 RALR--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKGSYSLSNYLQ 479
ALR G+ +IN D A+ PFGG + SG + GS L
Sbjct: 464 DALRNAAGNFYIN--DKPTGAVVGQQPFGGARASGTNDKAGS---PLNLL 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-28
Identities = 84/288 (29%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 189 APADGPYHVQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
P V+ + AGVLN+V G G G ALA+H ++D L FTGS TG ++ +
Sbjct: 173 TPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQ 231
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY- 307
A K + LE+GG +P ++ E AD+D A L + F + GQ C R V +
Sbjct: 232 FAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQG 291
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQ-----GPQIDSEQFEKILKYIRSGVDGGAKLETG 362
D F+ + A+A + VG + G I + + ++ + G K
Sbjct: 292 DAFLARLVAVAKRLTVGRWD----AEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLE 347
Query: 363 GERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 420
+L A + P + TGV + + +E FGP+ +++Y D DE I+ +N +++GL+
Sbjct: 348 MTQLQAGTGLLTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLS 404
Query: 421 AGVFTHNLDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYKQSGQGR 467
AG+ + + + + + +R G V W +A PFGG SG R
Sbjct: 405 AGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR 452
|
Length = 487 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 6e-28
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 19/277 (6%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
AGVLN+V G G ALA+H ++D L FTGS+ TG ++ + A K + LE+GG +P
Sbjct: 189 AGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNP 247
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGD 325
IV E AD+D A L + F + GQ C R V + D F+ + +A + VG
Sbjct: 248 LIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGA 307
Query: 326 ------PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF- 378
PF G + I + +++L + G K +L + P +
Sbjct: 308 WDAEPQPFMGAV-----ISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIID 362
Query: 379 -TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 437
TGV + + +E FGP+ +++Y D DE I +N +++GL+AG+ + + + + +
Sbjct: 363 VTGVAE---LPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLE 419
Query: 438 LRVGSV-WINCFDVFDAAIPFGGYKQSGQGREKGSYS 473
+R G V W +A PFGG SG R Y+
Sbjct: 420 IRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYA 456
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 116 bits (294), Expect = 1e-27
Identities = 97/291 (33%), Positives = 147/291 (50%), Gaps = 37/291 (12%)
Query: 197 VQTLHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKSNL 254
V+ LHE G+ VL ++ G G T GAAL + + +AFTGST T +I+ + LAA+
Sbjct: 731 VKLLHEA-GIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG- 788
Query: 255 KPVTL--ELGGKSPFIVCEDA---------DVDKAAELAHYALFFNQGQCCCAGSRTFVH 303
V L E GG++ IV D+ DV +A F + GQ C A FV
Sbjct: 789 PIVPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA-------FRSAGQRCSALRVLFVQ 839
Query: 304 ESVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL--E 360
E + D+ +E A+A + VGDP GP ID+E + +I + A+L +
Sbjct: 840 EDIADRVIEMLKGAMA-ELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLLAQ 897
Query: 361 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYG 418
G+++ PT F D + + E+FGP+ +++YK DLD+VI NA+ YG
Sbjct: 898 LPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYG 955
Query: 419 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQG 466
L G+ + +TA+ + +RVG+V++N + A + PFGG SG G
Sbjct: 956 LTLGIHSRIEETADRIADRVRVGNVYVN-RNQIGAVVGVQPFGGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 3e-27
Identities = 121/456 (26%), Positives = 176/456 (38%), Gaps = 99/456 (21%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILR-FADLLERHNDEI-AALETWDNGKPFEQS 162
R V R+ F G R + E K L+ L++ + D+I AAL D GKP +S
Sbjct: 1 APRLVRELRETFRSG---RTRSAEWRKSQLKGLLRLVDENEDDIFAALRQ-DLGKPSAES 56
Query: 163 AQTEVPMTTR--------LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGVLN--- 211
+ EV + L ++ A K T PA + + EP+GV V++
Sbjct: 57 FRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKA----EIVSEPLGVVLVISAWN 112
Query: 212 -------------------------------------------------IVSGYGPTAGA 222
++ G G
Sbjct: 113 FPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKVIEG-GVPETT 171
Query: 223 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE-- 280
AL + DK+ FTGS G+I++ AAK +L PVTLELGGK P IV D+ A
Sbjct: 172 ALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRI 229
Query: 281 -LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQG--PQ 336
+ N GQ C A V ES ++ A+K + F + + +
Sbjct: 230 AGGKWGC--NNGQACIAPDYVLVEESFAPTLID-----ALKNTLEKFFGENPKESKDLSR 282
Query: 337 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPV 396
I + + L + K+ GGER K YI+PT+ D I +EIFGP+
Sbjct: 283 IVNSHHFQRLSRLLDDPSVADKIVHGGER-DEKNLYIEPTILLDPPLDSSIMTEEIFGPL 341
Query: 397 QSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI- 455
I+ K ++E I+ N+ LAA VFT N + ++ G V N D +
Sbjct: 342 LPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFN-----DTVVQ 396
Query: 456 ------PFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
PFGG +SG G G +S + KAV+
Sbjct: 397 YAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 98.7 bits (247), Expect = 4e-22
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L ING++V+S + + +P TG+VI V AE+V+ AV+AA+ AF W
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPA--WSATP 58
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
+R +++ +F LLE + DE+A L T ++GK +
Sbjct: 59 VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADA 95
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 8e-21
Identities = 131/460 (28%), Positives = 190/460 (41%), Gaps = 105/460 (22%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145
DPR D++ +V E +V +A+ +A A P W ER+ I+ R ADL+E
Sbjct: 668 DPR--DIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILERAADLMEAQMQ 722
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG----------------------W--- 180
+ L + GK F +A EV RYYAG W
Sbjct: 723 TLMGLLVREAGKTF-SNAIAEVREAVDFLRYYAGQVRDDFDNDTHRPLGPVVCISPWNFP 781
Query: 181 ---------ADKIQG---LTAPADGPYHVQT----------LHEPIGV-AGVLNIVSGYG 217
A G L PA+ QT L E GV AGV+ ++ G G
Sbjct: 782 LAIFTGQVAAALAAGNSVLAKPAE-----QTPLIAAQAVRILLEA-GVPAGVVQLLPGRG 835
Query: 218 PTAGAALASHMEVDKLAFTGSTTTGKIVLQ------LAAKSNLKPVTLELGGKSPFIVCE 271
T GAAL + V + FTGST ++ LQ L + P+ E GG++ IV
Sbjct: 836 ETVGAALVADARVRGVMFTGSTEVARL-LQRNLAGRLDPQGRPIPLIAETGGQNAMIVDS 894
Query: 272 DA-------DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR--- 321
A DV +A F + GQ C A + + V D+ L M R
Sbjct: 895 SALTEQVVADVLASA-------FDSAGQRCSALRVLCLQDDVADR------TLKMLRGAM 941
Query: 322 ---VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK---LETGGERLGAKGYYIKP 375
+G+P + GP ID+E I ++I++ G G ++ P
Sbjct: 942 AECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPP 1001
Query: 376 TVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANT 433
T+ D L K E+FGPV +++Y LDE+I++ NAS YGL GV T +T
Sbjct: 1002 TLIELDSFDEL--KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQ 1059
Query: 434 LMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKG 470
+ + VG++++N ++ A + PFGG SG G + G
Sbjct: 1060 VTGSAHVGNLYVN-RNMVGAVVGVQPFGGEGLSGTGPKAG 1098
|
Length = 1318 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 92.8 bits (230), Expect = 3e-20
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-FN 289
DK+ +TGS+ G++++ AAK +L PV LELGGKSP +V D D+ + N
Sbjct: 190 DKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCN 248
Query: 290 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 349
GQ C + + + ++ A ++ G ++S F+++ K +
Sbjct: 249 NGQACISPDYILTTKEYAPKVID-AMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLL 307
Query: 350 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409
+ K+ GGE+ + I PT+ V D LI +EIFGP+ IL +L+E
Sbjct: 308 DEK-EVSDKIVYGGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESF 365
Query: 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA--AIPFGGYKQSGQGR 467
+ LAA +FTHN + G + +N V A +PFGG +SG G
Sbjct: 366 DVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGA 425
Query: 468 EKGSYSLSNYLQVKAVV 484
G +S + KAV+
Sbjct: 426 YHGKFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 1e-19
Identities = 84/291 (28%), Positives = 126/291 (43%), Gaps = 43/291 (14%)
Query: 217 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV-CEDADV 275
GP G L H + DK+ FTGS G+I++ AAK +L PV LELGGK P IV +
Sbjct: 173 GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSR 230
Query: 276 DK--------AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327
D + A GQ C A V E +E + +K+ G+
Sbjct: 231 DTKVAVNRIVGGKWGSCA-----GQACIAIDYVLVEERFAPILIELLKST-IKKFFGENP 284
Query: 328 KGGIQQGPQIDSEQFEKILKYIR------SGVDGGAKLETGGERLGAKGYYIKPTVFTGV 381
+ ++ + F+++ ++ S V GG+ + K +I+PT+
Sbjct: 285 RESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGS--------IDEKKLFIEPTILLNP 336
Query: 382 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 441
D I +EIFGP+ I+ K +++ I N+ LA FT+N ++ G
Sbjct: 337 PLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSG 396
Query: 442 SVWINCFDVFDA-------AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
SV N DA ++PFGG +SG GR G YS + KAV+
Sbjct: 397 SVTFN-----DAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLR 442
|
Length = 484 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 81.8 bits (203), Expect = 1e-16
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
+I G++V S G+TF + +P G+ I V EDV AV+AAR+AF E W ++ A
Sbjct: 2 VIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAPR 58
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R +I+ + + L + + + L + + GK EV + Y G + + GLT
Sbjct: 59 RGEIVRQIGEALRKKKEALGRLVSLEMGKIL-PEGLGEVQEMIDICDYAVGLSRMLYGLT 117
Query: 189 APADGPYHVQ-TLHEPIGVAGV 209
P++ P H P+GV GV
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGV 139
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 1e-16
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
++LLI+G+ V ++G TFPT++P T +V+ A+ A D++ A++AAR+AFDE W R T
Sbjct: 1 SRLLIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADK 183
A R + + + D L H +E+ L + G P AQ E P+ + A A+
Sbjct: 60 AL-RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDD--LGFAADLAES 116
Query: 184 IQ-----GLTAPADGPYHVQTLHEPIGVAG 208
G+ +P P E +GV G
Sbjct: 117 YAWTTDLGVASPMGIPTRRTLRREAVGVVG 146
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 7e-15
Identities = 64/231 (27%), Positives = 90/231 (38%), Gaps = 32/231 (13%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYAL 286
D +AFTGS T +L A N+ E + I+ DA + L
Sbjct: 223 DVVAFTGSAATAA---KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPE----FDL 275
Query: 287 FFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQI 337
F + GQ C A R FV E+ D +E A K VVGDP G++ GP +
Sbjct: 276 FVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLV 335
Query: 338 DSEQFEKILKYI---RSG---VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD- 390
EQ E + + + V GG KG + PT+ DD A
Sbjct: 336 SREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLC--DDPDAATAV 393
Query: 391 ---EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 438
E FGPV +++ Y L E I+ + + L A V T++ A L+
Sbjct: 394 HDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 3e-14
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L ING ++ G+ F + +P +G+V+ + A V+ AV AAR AF W R++
Sbjct: 3 LWINGDWIA-GQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFE 59
Query: 128 ERSKIILRFADLLERHNDEIA---ALETWDNGKPFEQSAQTEV 167
ER I+ RFA LLE + +E+A A ET GKP ++A TEV
Sbjct: 60 ERQAIVERFAALLEENKEELAEVIARET---GKPLWEAA-TEV 98
|
Length = 487 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 4e-14
Identities = 73/390 (18%), Positives = 125/390 (32%), Gaps = 82/390 (21%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
RA+ AA R+ +R+ + R L + +IAA GK + +
Sbjct: 1 PERALLAADI--STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAEN 58
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE---PIGVAGVLNI----VSGYG 217
R + ++ +I G Q H P G V+ +
Sbjct: 59 ICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPL 118
Query: 218 PTAGAALAS-------------------------------------------------HM 228
ALA H
Sbjct: 119 LQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQALLLHP 178
Query: 229 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALF 287
+ FTGS+ + +LA + + LEL G + ++ DA VD A +
Sbjct: 179 NPKMVLFTGSSRVAE---KLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT 235
Query: 288 FNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 346
GQ C A S FV E+ VEK AL +R + D G +Q + ++
Sbjct: 236 ACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQ------TFTTLAMI 289
Query: 347 KYIRSGVDGGAKLETGGERLGAK------GYYIKPTVFTGVKDDMLIAK---DEIFGPVQ 397
++ + G+ L G+ L G + +F + + + + +EIFGP
Sbjct: 290 AHMEN--LLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFA 347
Query: 398 SILKYKDLDE--VIQRSNASQYGLAAGVFT 425
+++YK V++ L A +++
Sbjct: 348 IVVEYKKDQLALVLELLERMHGSLTAAIYS 377
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I+G++ G++F + +P T +V+ A A V AV+AAR AF W R++
Sbjct: 1 LFIDGKWRAGQ-GESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPA--WARLSLE 57
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
ER ++ RFA LLE + +A + + GKP ++ TEV
Sbjct: 58 ERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEV 96
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 62/244 (25%), Positives = 102/244 (41%), Gaps = 40/244 (16%)
Query: 207 AGVLNIVSGYGPTAGAALASHM-EVDKLAFTGSTTTGKI------VLQLAAKSNLKPVTL 259
AG L++V G + A L H+ D ++FTGS T + V+Q + + N++ +L
Sbjct: 206 AGALSVVCG----SSAGLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSL 261
Query: 260 ELGGKSPFIVCEDADVDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQF 310
++ DA A + LF + GQ C A R FV E++YD
Sbjct: 262 NSA-----LLGPDAAPGSEA----FDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAV 312
Query: 311 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--- 367
E A K VG+P G++ GP + Q + + + + A++ G
Sbjct: 313 AEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGL-AALRAQAEVLFDGGGFALVD 371
Query: 368 ---AKGYYIKPTVFTGVKDDM---LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 421
A + PT+ G D + E+FGPV ++L Y+D + + Q L A
Sbjct: 372 ADPAVAACVGPTLL-GASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVA 430
Query: 422 GVFT 425
V++
Sbjct: 431 SVYS 434
|
Length = 521 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 3e-12
Identities = 72/277 (25%), Positives = 114/277 (41%), Gaps = 30/277 (10%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYA- 285
D +AFTGS T +L A N+ E + I+ EDA D+ E +A
Sbjct: 223 DVVAFTGSAATAD---RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEP-EFDLFAQ 278
Query: 286 -----LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 340
L GQ C A R V +++ + ++ A K V+GDP + G+ GP + E
Sbjct: 279 EIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLE 338
Query: 341 QFEKILKYIRSGVDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKD-EIFGPVQS 398
Q + + + + GA++ GG RL G + PT+ E FGPV +
Sbjct: 339 QRADVEAAVAALLAAGAEVRLGGPGRL--DGAFFPPTLLLAEDPWAGAVHATEAFGPVAT 396
Query: 399 ILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA---- 454
Y D E + + L A + T + + A + L ++ + DAA
Sbjct: 397 FFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTG 456
Query: 455 ----IP---FGGYKQSGQGREKGSY-SLSNYLQVKAV 483
+P GG ++G G E G S+ +Y+Q A+
Sbjct: 457 HGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAI 493
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 1e-11
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
P TG+ + + + DV A + AR A W ER+ + LRF DL+ DE
Sbjct: 2 APFTGEPLGELPQSTPADVEAAFARARAAQRA--WAARPFAERAAVFLRFHDLVLERRDE 59
Query: 147 IAALETWDNGK----PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT--- 199
+ L + GK FE+ V + RYYA A+++ G V T
Sbjct: 60 LLDLIQLETGKARRHAFEEVLD--VAIVA---RYYARRAERLLK-PRRRRGAIPVLTRTT 113
Query: 200 -LHEPIGVAGVL 210
P GV GV+
Sbjct: 114 VNRRPKGVVGVI 125
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 9e-11
Identities = 66/236 (27%), Positives = 99/236 (41%), Gaps = 42/236 (17%)
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD--------VDKAAELA 282
D + FTGS T + +L A N+ + PF +AD D
Sbjct: 227 DVVTFTGSAATAQ---KLRAHPNV------VANSVPFTA--EADSLNAAILGPDATPGTP 275
Query: 283 HYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 333
+ LF + GQ C A R V ++ D +E A K VVGDP G++
Sbjct: 276 EFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRM 335
Query: 334 GPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGA---KGYYIKPTVFTGVKDDML 386
G EQ E + + + + + A++ GG E +GA KG + PT+ DD L
Sbjct: 336 GALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYC--DDPL 392
Query: 387 IAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 438
A E FGPV +++ Y DLDE I+ + + L A + T + + A L+
Sbjct: 393 EAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGA 448
|
Length = 675 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 3e-10
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
G ++ P G+ I V + ED + AA++AF E W + A +R +I+ +
Sbjct: 9 GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--WRDVPAPKRGEIVRQIG 66
Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHV 197
D L + + + L + + GK EV + + G + ++ GLT P++ P H
Sbjct: 67 DALRKKKEALGKLVSLEMGKIL-PEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHR 125
Query: 198 QTLHE---PIGVAGVL 210
+ E P+GV GV+
Sbjct: 126 --MMEQWNPLGVVGVI 139
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+P TG+V+ VA +D+ A++AA KAF P + A+ R+ I+L LE
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD 192
+E+A + GKP + A+ EV FR A A +I G P D
Sbjct: 59 RFEELAETIVLEAGKPIKD-ARGEVARAIDTFRIAAEEATRIYGEVLPLD 107
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
T++P TG+ + ++V+ A++ A F + + T +R++ ADLLE
Sbjct: 5 TINPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEA 62
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PAD----GPYHVQ 198
D++AAL T + GK SA+ E + FRYY A+ + L A PAD G
Sbjct: 63 DQVAALMTLEMGKTL-ASAKAEALKCAKGFRYY---AEHAEALLADEPADAAAVGASRAY 118
Query: 199 TLHEPIGV 206
++P+GV
Sbjct: 119 VRYQPLGV 126
|
Length = 457 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 57.9 bits (141), Expect = 8e-09
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 75 VDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
+ + G+ P + P V+ VA +AE V +A++AAR AF W R ER+ I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA--WSRTPVEERAAIL 613
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
R ADLLE + E+ AL + GK Q A EV RYYA A ++
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTL-QDAIAEVREAVDFCRYYAAQARRL 663
|
Length = 1038 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 2e-08
Identities = 58/253 (22%), Positives = 89/253 (35%), Gaps = 24/253 (9%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLELGGKS 265
AGV +++ G G G AL H + + FTGS G+ + AA P ELG +
Sbjct: 168 AGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVN 227
Query: 266 PFIVCEDADVDKAAELA---HYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKR 321
P + A ++ +A +L GQ C V D F+
Sbjct: 228 PVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAA 287
Query: 322 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 381
GI + + E + G L G G PT+F V
Sbjct: 288 PAQTMLTPGIAEAYRQGVEA--------LAAAPGVRVLAGGAAAEGGNQA--APTLFK-V 336
Query: 382 KDDMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN--LDTANTLM 435
+A E+FGP +++Y D E++ + A + L A + L A L+
Sbjct: 337 DAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELL 396
Query: 436 RAL--RVGSVWIN 446
L + G + N
Sbjct: 397 PVLERKAGRLLFN 409
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 8e-08
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL 150
G V+ V +A DV+RA + A A W ER+ ++ R ADLLE H DEIA
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAAQRA--WAATPPRERAAVLRRAADLLEEHADEIADW 58
Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGVL 210
++G A EV AG + QG P+ P+GV GV+
Sbjct: 59 IVRESGS-IRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVI 117
Query: 211 N 211
+
Sbjct: 118 S 118
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 9e-06
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I G+ V + P G V+ V + +DV RA + A A+ P +T Y
Sbjct: 6 LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR----PTLTRY 58
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNG 156
ERS I+ R A LL +EI+ L T ++G
Sbjct: 59 ERSAILDRAAALLAARKEEISDLITLESG 87
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 8e-05
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 27/230 (11%)
Query: 210 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 269
++++ GPT L FTGS+ K+ +LA + + K V LE G I+
Sbjct: 202 VDLIHSDGPTMNKIL-LEANPRMTLFTGSS---KVAERLALELHGK-VKLEDAGFDWKIL 256
Query: 270 CED-ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPF 327
D +DVD A + GQ C A S F HE+ ++K ALA +R + D
Sbjct: 257 GPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED-- 314
Query: 328 KGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAK------GYYIKPTVFTG 380
+ GP + + E+IL ++ + GAK+ GG+ L G Y VF
Sbjct: 315 ---LTIGP-VLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVP 370
Query: 381 VKDDML-----IAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGV 423
+++ + + E+FGP Q + +YKD L V++ L A V
Sbjct: 371 LEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAV 420
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 51/255 (20%), Positives = 81/255 (31%), Gaps = 73/255 (28%)
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL----------F 174
+R II A+ L +A+ + G + M
Sbjct: 14 HDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTE 73
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGV-----------AGVLNIVSGY------- 216
R IQ + P +G +V+ PIGV +G+ + + G
Sbjct: 74 RGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGITSALRGIATRNQCI 131
Query: 217 ---GPTAGA----------------------------------ALASHMEVDKLAFTGST 239
P+A L SH ++D + TG
Sbjct: 132 FRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATG-- 189
Query: 240 TTGKIVLQLAAK-SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 298
G+ + A K S PV G SP +V E AD ++A+ H + FF+Q C +
Sbjct: 190 --GRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACASEQ 246
Query: 299 RTFVHESVYDQFVEK 313
+V + V D E+
Sbjct: 247 NLYVVDDVLDPLYEE 261
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG+ ++ + A+D+ A+ A F + W R++ + L +
Sbjct: 11 SVNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARS 68
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
+E+A + T + GKP Q A+ EV + L +YA
Sbjct: 69 EEMAQMITREMGKPINQ-ARAEVAKSANLCDWYA 101
|
Length = 462 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 493 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.96 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.9 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 99.87 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.48 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.32 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.06 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 92.46 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 89.33 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 83.07 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-100 Score=762.67 Aligned_cols=426 Identities=59% Similarity=0.969 Sum_probs=416.6
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+++.++++++++||+||+++++|++++.+|++.||++||+||+.+.|++++..+|.++|+++++++++++++
T Consensus 22 ~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~ 101 (501)
T KOG2450|consen 22 GLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADV 101 (501)
T ss_pred heeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHH
Confidence 89999999999999999999999999999999999999999999999999966799999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------- 207 (493)
|+.+.+++.|||+.+++..++..+++.+|||++|++++++..++.+..+..|+.++|+|||
T Consensus 102 lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaP 181 (501)
T KOG2450|consen 102 LAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAP 181 (501)
T ss_pred HhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhh
Confidence 9999999999999999967999999999999999999999888888889999999999999
Q ss_pred ----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC
Q 011130 208 ----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253 (493)
Q Consensus 208 ----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~ 253 (493)
||+|+|+|.|.+++++|.+||+|++|+||||+.+|+.|++.++.++
T Consensus 182 ALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n 261 (501)
T KOG2450|consen 182 ALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESN 261 (501)
T ss_pred HHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcC
Confidence 9999999999999999999999999999999999999999999878
Q ss_pred CCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhh-cccCCCCCCCCc
Q 011130 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQ 332 (493)
Q Consensus 254 ~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~vg~p~~~~~~ 332 (493)
+||++||||||+|.||++|||+|.|++.++.+.|+|+||+|++.+|+|||+++||+|+++++++..+ +++|||+++.+.
T Consensus 262 ~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~ 341 (501)
T KOG2450|consen 262 LKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTE 341 (501)
T ss_pred CceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999966 999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 412 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 412 (493)
+||++++.|+++++.||+.++++|+++++||.+.+++||||.|||+.++.++|.+++||+||||++|++|++.||+|+++
T Consensus 342 qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~A 421 (501)
T KOG2450|consen 342 QGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERA 421 (501)
T ss_pred cccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHh
Confidence 99999999999999999999999999999998877899999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCC
Q 011130 413 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAW 492 (493)
Q Consensus 413 n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~ 492 (493)
|++.|||+++|||+|.+++++++.++++|+||||++..+++.+||||+|+||+||+.|.+++.+|++.|+|+++++.+.|
T Consensus 422 N~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~~~~~~ 501 (501)
T KOG2450|consen 422 NNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKLPQKNS 501 (501)
T ss_pred cCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988765
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-99 Score=800.50 Aligned_cols=484 Identities=82% Similarity=1.303 Sum_probs=457.3
Q ss_pred CCcccccccccccccCCCC-ccccCCCCchhhHHhHHhhhhcccccccccccccCCCCCCCCCCccccceeCCEeeeCCC
Q 011130 1 MAARRIPLLLSRSFTSSSP-TLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSAS 79 (493)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~ 79 (493)
||+||+++||+|+++++++ ++++.+.++..++++. +|+| +.++.++.|++|+.++++++||||+|+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~ 71 (538)
T PLN02466 1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGRGIR------RFST---AAAAVEEPITPPVQVSYTQLLINGQFVDAAS 71 (538)
T ss_pred CCchHHHHHHHHHhhcccHHHhhhccccCCCCcccc------cccc---ccccccCcCCCccccccccceECCEEecCCC
Confidence 8999999999999977765 6777888888899999 9999 6577999999999999999999999998777
Q ss_pred CCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Q 011130 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF 159 (493)
Q Consensus 80 ~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~ 159 (493)
+++++++||+||+++++++.++.+|+++||++|++||+.+.|++++.++|.++|++++++|+++.++|++++++|+|||+
T Consensus 72 ~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 72 GKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 89999999999999999999999999999999999998556999999999999999999999999999999999999999
Q ss_pred hhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE--------------------------------
Q 011130 160 EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA-------------------------------- 207 (493)
Q Consensus 160 ~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv-------------------------------- 207 (493)
.++...|+..+++.++||+.|.++..+...+.......++.++|+|||
T Consensus 152 ~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs 231 (538)
T PLN02466 152 EQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECC
Confidence 998656999999999999999988877655544444668999999999
Q ss_pred ---------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCc
Q 011130 208 ---------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266 (493)
Q Consensus 208 ---------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p 266 (493)
|++|+|++.+.++++.|+.||+||+|+||||+++|+.|++.+++.++||+++|||||||
T Consensus 232 ~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp 311 (538)
T PLN02466 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSP 311 (538)
T ss_pred CCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCe
Confidence 99999999777889999999999999999999999999999884478999999999999
Q ss_pred eEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHH
Q 011130 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 346 (493)
Q Consensus 267 ~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~ 346 (493)
+||++|||++.|++.+++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.
T Consensus 312 ~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~ 391 (538)
T PLN02466 312 FIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKIL 391 (538)
T ss_pred EEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecC
Q 011130 347 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426 (493)
Q Consensus 347 ~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 426 (493)
++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 392 ~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~ 471 (538)
T PLN02466 392 RYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQ 471 (538)
T ss_pred HHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 99999999999999999865557899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCCC
Q 011130 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 493 (493)
Q Consensus 427 d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~~ 493 (493)
|.+.+.++++++++|+||||+++..++.+||||+|+||+|+++|.+++++|++.|++++..++|+|+
T Consensus 472 d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~~~~~ 538 (538)
T PLN02466 472 NLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL 538 (538)
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCCCCCC
Confidence 9999999999999999999998778888999999999999999999999999999999999999997
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-92 Score=672.04 Aligned_cols=418 Identities=37% Similarity=0.630 Sum_probs=400.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+.+.||+|+|+++.++++|+|.||++||+|+.|++++.+|.+.||++|.+||+ .|+.++..+|.++|+++.++|.+|.
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~ 100 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK 100 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence 45789999999998899999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
|+|++++++|+|||+.++.. ||.-+..+++||++.++++.+...+.. ......+.++|+||+
T Consensus 101 ddLa~iiTlE~GKpL~eA~g-Ev~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK 179 (503)
T KOG2451|consen 101 DDLATIITLENGKPLGEAKG-EVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK 179 (503)
T ss_pred HHHHHHHhhhcCCchhhccc-eeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence 99999999999999999985 999999999999999999999987644 456788999999998
Q ss_pred -------------------------------------eEEEeeeCC---ccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 -------------------------------------GVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~---~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++. ..+.+..|+.+|+|++|+||||+.+||.++.
T Consensus 180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~ 259 (503)
T KOG2451|consen 180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA 259 (503)
T ss_pred HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence 999999963 4478999999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
+++. +.|++.+|||||.|+||++|||+|+|++.....+|.++||.|.+..|+|||++|||+|+++|.++++++++||-+
T Consensus 260 qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 260 QSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred hhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 9998 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
|+++.+||||++++++++..+++||+.+|+++++||+...+ .++|++||||.+++++|-+..||+|||+.+|++|+|.|
T Consensus 339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdtee 418 (503)
T KOG2451|consen 339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEE 418 (503)
T ss_pred CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHH
Confidence 99999999999999999999999999999999999995544 45899999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|+|+++|++..||++|+||+|.++..+++++|++|.|.+|.--..++..||||+|+||+||+++.+++++|+..|.+++.
T Consensus 419 Evi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig 498 (503)
T KOG2451|consen 419 EVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIG 498 (503)
T ss_pred HHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeec
Confidence 99999999999999999999999999999999999999998766788999999999999999999999999999998875
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-89 Score=723.25 Aligned_cols=433 Identities=56% Similarity=0.974 Sum_probs=407.0
Q ss_pred CCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHH
Q 011130 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (493)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l 140 (493)
+.+...++||||+|+.+.++.+++++||+||+++++++.++.+|++++|++|++||+.+.|+++|.++|.++|++++++|
T Consensus 16 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 95 (501)
T PLN02766 16 PEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLI 95 (501)
T ss_pred CCcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHH
Confidence 44566788999999987677899999999999999999999999999999999999755699999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------
Q 011130 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------- 207 (493)
Q Consensus 141 ~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------- 207 (493)
+++.++|++++++|+|||+.++...|+..+++.++|++..++++.+...+.......++.++|+|||
T Consensus 96 ~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 175 (501)
T PLN02766 96 EEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMF 175 (501)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHH
Confidence 9999999999999999999888755999999999999998887766544433344567889999999
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++++.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 176 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 176 FMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 8999999987788999999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
.+++.++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|.
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~ 335 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPF 335 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 98833899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
++++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 336 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~de 415 (501)
T PLN02766 336 DPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEE 415 (501)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976545789999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
||+++|+++|||+++|||+|.+.+.++++++++|+|+||+....++.+||||+|+||+|+++|.+++++|++.|++++..
T Consensus 416 ai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (501)
T PLN02766 416 AIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL 495 (501)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999999999997777788999999999999999999999999999999999
Q ss_pred CCCCCC
Q 011130 488 KNPAWL 493 (493)
Q Consensus 488 ~~~~~~ 493 (493)
-+.||+
T Consensus 496 ~~~~~~ 501 (501)
T PLN02766 496 YNSPWL 501 (501)
T ss_pred cccccC
Confidence 999996
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-89 Score=716.40 Aligned_cols=417 Identities=35% Similarity=0.628 Sum_probs=393.5
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|+++++
T Consensus 11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 88 (482)
T PRK11241 11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQD 88 (482)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3689999999766788999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-----------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv----------------- 207 (493)
+|++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+...++.++|+|||
T Consensus 89 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (482)
T PRK11241 89 DLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167 (482)
T ss_pred HHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence 9999999999999999985 999999999999998887765544332 234567899999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|+|.+.++++.|+.||+|++|+||||+++|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~ 247 (482)
T PRK11241 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK 247 (482)
T ss_pred HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 99999999777889999999999999999999999999999998
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 248 -~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 326 (482)
T PRK11241 248 -DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV 326 (482)
T ss_pred -cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 406 (482)
T PRK11241 327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQ 406 (482)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999754346899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+|+++|||+++|||+|.+.++++++++++|+||||++....+.+||||+|+||+|+++|.+++++||+.|++++.
T Consensus 407 aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 407 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred hhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 999999999999999999999999999999999998766667789999999999999999999999999999765
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-88 Score=714.13 Aligned_cols=428 Identities=29% Similarity=0.396 Sum_probs=396.2
Q ss_pred CCCCCCCCCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHH
Q 011130 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133 (493)
Q Consensus 54 ~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL 133 (493)
+|+-.-+......++||||+|+.+.++++++++||+||++|++++.++.+|+++||++|++||+ .|+++|.++|.++|
T Consensus 102 ~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL 179 (604)
T PLN02419 102 PEQSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVM 179 (604)
T ss_pred CCcccCcccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHH
Confidence 3444444455577899999999866678899999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-----
Q 011130 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA----- 207 (493)
Q Consensus 134 ~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv----- 207 (493)
++++++|+++.++|++++++|+|||+.++.. |+..+++.++|++++++...+...+.. .+...++.++|+|||
T Consensus 180 ~k~a~~L~~~~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~P 258 (604)
T PLN02419 180 LKFQELIRKNMDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICP 258 (604)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECC
Confidence 9999999999999999999999999999985 999999999999999887766544322 344567899999999
Q ss_pred ------------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCc
Q 011130 208 ------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGST 239 (493)
Q Consensus 208 ------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~ 239 (493)
|++|+|+|.+ +.++.|+.|++|++|+||||+
T Consensus 259 wNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt 337 (604)
T PLN02419 259 FNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSN 337 (604)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCCh
Confidence 9999999854 678889999999999999999
Q ss_pred HHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHh
Q 011130 240 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 319 (493)
Q Consensus 240 ~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~ 319 (493)
.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++
T Consensus 338 ~vG~~I~~~Aa~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~ 415 (604)
T PLN02419 338 TAGMHIYARAAA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAK 415 (604)
T ss_pred HHHHHHHHHHhc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHH
Confidence 999999999988 89999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred hcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc----CCCCceeeceEEecCCCCccccccccccc
Q 011130 320 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGP 395 (493)
Q Consensus 320 ~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~~E~fgP 395 (493)
++++|+|.|+++++||++++.+++++.++|++|+++|+++++||... ...|+|++||||.+++++|.+++||+|||
T Consensus 416 ~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGP 495 (604)
T PLN02419 416 ALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGP 495 (604)
T ss_pred HhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCC
Confidence 99999999999999999999999999999999999999999999752 13689999999999999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcC-CCCCCCCccCCCCCCCC--CcchHH
Q 011130 396 VQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD-VFDAAIPFGGYKQSGQG--REKGSY 472 (493)
Q Consensus 396 vl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~-~~~~~~pfGG~~~SG~G--~~~g~~ 472 (493)
|++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.||||+.. ...+.+||||+|+||+| +++|.+
T Consensus 496 Vl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~ 575 (604)
T PLN02419 496 VLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKA 575 (604)
T ss_pred EEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHH
Confidence 999999999999999999999999999999999999999999999999999863 33477999999999999 799999
Q ss_pred HHHhhhhceEEEEeC
Q 011130 473 SLSNYLQVKAVVTAL 487 (493)
Q Consensus 473 ~l~~~~~~k~v~~~~ 487 (493)
++++|++.|+|+++.
T Consensus 576 gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 576 GVDFFTQIKLVTQKQ 590 (604)
T ss_pred HHHHhhCeEEEEEcc
Confidence 999999999998875
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-88 Score=703.32 Aligned_cols=413 Identities=48% Similarity=0.777 Sum_probs=392.0
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+...+ +++++||+||+++++++.++.+|+++|+++|+.+|+ .|+++++.+|.++|++++++|++|.++
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e 77 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE 77 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 6799999997644 899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------- 207 (493)
|+.++++|+|||+.+++. |+..+++.++|++++++++.+...+.......+++++|+|||
T Consensus 78 la~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap 156 (472)
T COG1012 78 LAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP 156 (472)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence 999999999999999986 799999999999999998888765544467889999999999
Q ss_pred ----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC
Q 011130 208 ----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253 (493)
Q Consensus 208 ----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~ 253 (493)
|++|+|++.+.+.++.|+.||+|++|+||||+++|+.|++.+++ +
T Consensus 157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~ 235 (472)
T COG1012 157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-N 235 (472)
T ss_pred HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-c
Confidence 89999999877799999999999999999999999999999998 9
Q ss_pred CCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhh-cccCCCCCCCCc
Q 011130 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQ 332 (493)
Q Consensus 254 ~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~vg~p~~~~~~ 332 (493)
+||+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++|||.|+.++
T Consensus 236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~ 314 (472)
T COG1012 236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD 314 (472)
T ss_pred CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 65 999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 412 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 412 (493)
+||++++.+++++.++|++++++|+++++||+. .. |+|++|||+.++.++|++++||+||||++|++|+|+||||+++
T Consensus 315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lA 392 (472)
T COG1012 315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELA 392 (472)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999983 33 9999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 011130 413 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488 (493)
Q Consensus 413 n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~ 488 (493)
|+++|||+++|||+|..++.++++++++|+||||++.. ..+.+||||+|+||+|+++|.+++++|++.|++.....
T Consensus 393 N~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 393 NDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 99999999999999999999999999999999998753 45779999999999999999999999999999988753
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-87 Score=701.09 Aligned_cols=421 Identities=45% Similarity=0.803 Sum_probs=395.2
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.+.|+++|..+|.++|++++++|+++.+
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999998767889999999999999999999999999999999999974469999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC----CCceeEEEeeeeeeE--------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~PlGVv-------------- 207 (493)
+|++++++|+|||..++...|+..+++.++|++.++++..+...+.. .....++.++|+|||
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 99999999999999998656999999999999999988776544422 222467889999999
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999777889999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|.+
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 88447899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC--CHH
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLD 406 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~ 406 (493)
+++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+ |++
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~ 405 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVD 405 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHH
Confidence 999999999999999999999999999999999997655578999999999999999999999999999999998 699
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|+++|||+++|||+|.+.++++++++++|.||||+++...+.+||||+|+||+|+++|.+++++|++.|+|+++
T Consensus 406 eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 406 GVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-86 Score=700.63 Aligned_cols=422 Identities=78% Similarity=1.297 Sum_probs=397.4
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
++++++||||+|+.+.++.+++++||+||++|++++.++.+|+++++++|++||+.+.|+++|.++|.++|++++++|++
T Consensus 1 ~~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 80 (476)
T cd07142 1 VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEK 80 (476)
T ss_pred CCcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHH
Confidence 35678999999997767789999999999999999999999999999999999974459999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------- 207 (493)
+.++|++++++|+|||..+++..|+..+++.++|++.++++..+...+...+...++.++|+|||
T Consensus 81 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 160 (476)
T cd07142 81 HADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAW 160 (476)
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHH
Confidence 99999999999999999988756999999999999999888776655533345567899999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|++.+.++++.|+.||++|.|+||||+.+|+.|++.+
T Consensus 161 ~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~a 240 (476)
T cd07142 161 KVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240 (476)
T ss_pred HHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 899999997777899999999999999999999999999998
Q ss_pred hhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 250 ~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
++.+++|+++|||||||+||++|||+|.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++
T Consensus 241 a~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 320 (476)
T cd07142 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRK 320 (476)
T ss_pred HHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 85478999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
++++||++++.+++++.++|++++++|+++++||...+..|+|+.|||+.+++++|++++||+||||++|++|+|++|||
T Consensus 321 ~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai 400 (476)
T cd07142 321 GVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVI 400 (476)
T ss_pred CCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999999998655578999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+++|+++|||+++|||+|.+.+.++++++++|+|+||+++..++.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 401 ~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 401 KRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 999999999999999999999999999999999999998878888999999999999999999999999999885
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=698.06 Aligned_cols=417 Identities=36% Similarity=0.627 Sum_probs=391.5
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+ ++.+++++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.+
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ 78 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 478999999975 578899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE-----------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv----------------- 207 (493)
+|++++++|+|||..++...|+..+++.++|++..++.+.+...+. ..+...++.++|+|||
T Consensus 79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 158 (472)
T TIGR03374 79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 158 (472)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence 9999999999999998865699999999999998887766542221 1234567899999999
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~ 252 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~- 237 (472)
T TIGR03374 159 APALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP- 237 (472)
T ss_pred HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHhCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence 99999999777889999999999999999999999999999998
Q ss_pred CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCc
Q 011130 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332 (493)
Q Consensus 253 ~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~ 332 (493)
++||+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|++++.++++|+|.+++++
T Consensus 238 ~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~ 317 (472)
T TIGR03374 238 SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTE 317 (472)
T ss_pred cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCC-CEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~g-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
+||+++..+++++.++|++++++| +++++||......|+|+.|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus 318 ~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 397 (472)
T TIGR03374 318 LGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNW 397 (472)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHH
Confidence 999999999999999999999999 7999999765446899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+|+++|||+++|||+|.+++.++++++++|+||||+.....+.+||||+|+||+|+++|.+++++|++.|+++.+
T Consensus 398 an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~~ 472 (472)
T TIGR03374 398 ANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK 472 (472)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEEC
Confidence 999999999999999999999999999999999999777778899999999999999999999999999998753
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-86 Score=696.22 Aligned_cols=418 Identities=42% Similarity=0.756 Sum_probs=396.3
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+.+.++.+++++||+||+++++++.++.+|++++|++|++||+ .|+++|.++|.++|++++++|++|.++
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL 79 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999877788999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------- 207 (493)
|++++++|+|||+.++...|+..+++.+++++++++...+...+...+...++.++|+|||
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 9999999999999998766999999999999998887766544444445678899999999
Q ss_pred ---------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCC
Q 011130 208 ---------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254 (493)
Q Consensus 208 ---------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~ 254 (493)
|++|+|++.+.++++.|+.||+|++|+||||+.+|+.|++.+++ ++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~ 238 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-NL 238 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHHhCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence 99999999777889999999999999999999999999999988 89
Q ss_pred CceeEecCCCCceEEccCC-----CHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 255 KPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 255 ~pv~lelgG~~p~iV~~da-----Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
||+++|||||||+||++|| |++.|++.+++++|+++||.|++++|||||++++|+|+++|+++++++++|+|.|+
T Consensus 239 ~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 318 (480)
T cd07559 239 IPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDP 318 (480)
T ss_pred CcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 398 (480)
T cd07559 319 ETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDE 398 (480)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCH
Confidence 99999999999999999999999999999999997643 46899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
+|+|+++|+++|||+++|||+|.+++.++++++++|+||||+++..++.+||||+|+||+|+++|.+++++||+.|++++
T Consensus 399 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 478 (480)
T cd07559 399 EEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILV 478 (480)
T ss_pred HHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999887777889999999999999999999999999999987
Q ss_pred eC
Q 011130 486 AL 487 (493)
Q Consensus 486 ~~ 487 (493)
++
T Consensus 479 ~~ 480 (480)
T cd07559 479 SY 480 (480)
T ss_pred eC
Confidence 54
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-86 Score=694.01 Aligned_cols=418 Identities=44% Similarity=0.763 Sum_probs=394.4
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL 79 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 579999999876778999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------- 207 (493)
|++++++|+|||+.+++..|+..+++.++|++.++++..+...+...+...++.++|+|||
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 9999999999999998756999999999999988877666544433344568899999999
Q ss_pred ---------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCC
Q 011130 208 ---------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254 (493)
Q Consensus 208 ---------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~ 254 (493)
|++|+|++.+.++++.|+.||++|.|+||||+.+|+.|++.+++ ++
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~ 238 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-KL 238 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHHhCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence 89999998777889999999999999999999999999999988 89
Q ss_pred CceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccc
Q 011130 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 334 (493)
Q Consensus 255 ~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~g 334 (493)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++|
T Consensus 239 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~g 318 (475)
T cd07117 239 IPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMG 318 (475)
T ss_pred CcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 335 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 335 pli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
|++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|.||||+
T Consensus 319 pli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~ 398 (475)
T cd07117 319 AQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVID 398 (475)
T ss_pred CcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHH
Confidence 999999999999999999999999999997543 3689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.+.+.++++++++|+|+||+++..++.+||||+|+||+|+++|.+++++||+.|++++.+
T Consensus 399 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~~ 475 (475)
T cd07117 399 MANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYIDL 475 (475)
T ss_pred HHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEeC
Confidence 99999999999999999999999999999999999998777788999999999999999999999999999998753
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=694.40 Aligned_cols=417 Identities=40% Similarity=0.650 Sum_probs=393.1
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++++|++|++||+ .|+++|.++|.++|++++++|+++.+
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIANKE 102 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4789999999766678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-----------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv----------------- 207 (493)
+|++++++|+|||..++.. |+..+++.++|++..+++..+...+.. .+...++.++|+|||
T Consensus 103 ~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i 181 (498)
T PLN02278 103 DLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181 (498)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence 9999999999999999985 999999999999999887766544432 234567889999998
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++++.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 261 (498)
T PLN02278 182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261 (498)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh
Confidence 99999998777788999999999999999999999999999988
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|+|||||+||++|||+|.|++.|++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 262 -~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~ 340 (498)
T PLN02278 262 -TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGV 340 (498)
T ss_pred -cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|+||||++
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~ 420 (498)
T PLN02278 341 TQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAI 420 (498)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999764446899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+|+++|||+++|||+|.+.++++++++++|+||||+.....+.+||||+|+||+|+++|++++++|++.|+|+..
T Consensus 421 ~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 421 ANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 999999999999999999999999999999999998765567799999999999999999999999999998764
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-85 Score=694.17 Aligned_cols=420 Identities=44% Similarity=0.752 Sum_probs=395.1
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
.+.++||||+|+.+.++.+++++||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRER 82 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 456889999999776788999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE----------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv---------------- 207 (493)
.++|++++++|+|||..+++..|+..+++.+++++++++.+.+...+...+...++.++|+|||
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~ 162 (488)
T PRK13252 83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWK 162 (488)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHH
Confidence 9999999999999999998756999999999999998887766544433344568899999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+. +++.|+.||+||+|+||||+++|+.|.+.++
T Consensus 163 ~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa 241 (488)
T PRK13252 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241 (488)
T ss_pred HHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 89999998665 8899999999999999999999999999998
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
. +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||+++||+|+++|+++++++++|||.+++
T Consensus 242 ~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 242 A-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred h-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
+++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|++
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ 400 (488)
T PRK13252 321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDED 400 (488)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHH
Confidence 9999999999999999999999999999999996432 358999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 401 eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 401 EVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999998766677899999999999999999999999999999886
Q ss_pred C
Q 011130 487 L 487 (493)
Q Consensus 487 ~ 487 (493)
.
T Consensus 481 ~ 481 (488)
T PRK13252 481 M 481 (488)
T ss_pred C
Confidence 4
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-85 Score=692.14 Aligned_cols=415 Identities=40% Similarity=0.665 Sum_probs=390.2
Q ss_pred ceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCC-CCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~-w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
+||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ . |+++|..+|.++|++++++|++++++
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV--SAWAKTTPAERGRILLRLADLIEQHGEE 79 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH--hhhccCCHHHHHHHHHHHHHHHHHCHHH
Confidence 68999999876678899999999999999999999999999999999997 5 99999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC------CCCceeEEEeeeeeeE-------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA------DGPYHVQTLHEPIGVA------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~------~~~~~~~~~~~PlGVv------------- 207 (493)
|++++++|+|||..+++..|+..+++.++++++++++..+...+. ......++.++|+|||
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 159 (477)
T cd07113 80 LAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIA 159 (477)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHH
Confidence 999999999999999875599999999999999988766543321 1224567899999999
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++.+. +++.|+.||+||+|+||||+++|+.|++
T Consensus 160 ~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 238 (477)
T cd07113 160 VWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGR 238 (477)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 89999998766 8899999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.
T Consensus 239 ~aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 317 (477)
T cd07113 239 QAAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPM 317 (477)
T ss_pred HHHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9988 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
|+++++||++++.+++++.++|++++++|+++++||....+.|+|++|||+.+++++|.++++|+||||++|++|+|+||
T Consensus 318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976544689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
||+++|+++|||+++|||+|.+.++++++++++|+|+||+++..++.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999998777778899999999999999999999999999999865
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-85 Score=692.03 Aligned_cols=425 Identities=59% Similarity=0.999 Sum_probs=398.3
Q ss_pred CCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC-CCCCCCHHHHHHHHHHHHHH
Q 011130 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL 139 (493)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~-~w~~~~~~~R~~iL~~la~~ 139 (493)
+.++.+++||||+|+.+.++.+++++||+||+++++++.++.+++++++++|++||+.+ .|+++|.++|.++|++++++
T Consensus 2 ~~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~ 81 (481)
T cd07141 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADL 81 (481)
T ss_pred cccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHH
Confidence 34667789999999987678899999999999999999999999999999999999742 69999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------
Q 011130 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------ 207 (493)
Q Consensus 140 l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------ 207 (493)
|+++.++|++++++|+|||..++...|+..+++.++++++++++..+...+.......++.++|+|||
T Consensus 82 l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 161 (481)
T cd07141 82 IERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLM 161 (481)
T ss_pred HHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHH
Confidence 99999999999999999999766545999999999999999888877554433445567899999999
Q ss_pred -----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHH
Q 011130 208 -----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246 (493)
Q Consensus 208 -----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 246 (493)
|++|+|++++.++++.|+.||+||+|+||||+.+|+.|+
T Consensus 162 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 241 (481)
T cd07141 162 AAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241 (481)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999997777889999999999999999999999999
Q ss_pred HHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCC
Q 011130 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326 (493)
Q Consensus 247 ~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p 326 (493)
+.++..++||+++|+|||||+||++|||++.|++.|++++|.++||.|+++++||||+++||+|+++|+++++++++|+|
T Consensus 242 ~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 98874478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 327 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
+|+++++||++++.+++++.++|++++++|+++++||+..+..|+|++|||+.+++++|++++||+||||++|++|+|++
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 99999999999999999999999999999999999998755578999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
|||+++|+++|||+++|||+|.+++.++++++++|+||||++...++.+||||+|+||+|+++|.+++++||+.|++++
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 9999999999999999999999999999999999999999987778889999999999999999999999999999875
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-84 Score=686.04 Aligned_cols=420 Identities=42% Similarity=0.715 Sum_probs=394.8
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHc-----cCCCCCCCCHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-----DEGPWPRMTAYERSKIILRFAD 138 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~-----~~~~w~~~~~~~R~~iL~~la~ 138 (493)
...++||||+|+.+.++.+++++||+||++|++++.++.+|+++||++|++|| + .|+++|..+|.++|+++++
T Consensus 6 ~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a~ 83 (503)
T PLN02467 6 PRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIAA 83 (503)
T ss_pred CccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHHH
Confidence 34578999999987677899999999999999999999999999999999999 6 8999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccC-CCC---CCceeEEEeeeeeeE-------
Q 011130 139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PAD---GPYHVQTLHEPIGVA------- 207 (493)
Q Consensus 139 ~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~---~~~~~~~~~~PlGVv------- 207 (493)
+|++++++|++++++|+|||+.++.. |+..+++.++|++.+++++.+... +.. .....++.++|+|||
T Consensus 84 ~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 162 (503)
T PLN02467 84 KITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWN 162 (503)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCC
Confidence 99999999999999999999999985 999999999999999888766432 111 234568899999999
Q ss_pred ----------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHH
Q 011130 208 ----------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 241 (493)
Q Consensus 208 ----------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~ 241 (493)
|++|+|++.+.++++.|+.||+|++|+||||+.+
T Consensus 163 ~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~ 242 (503)
T PLN02467 163 YPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTAT 242 (503)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHH
Confidence 8999999977788999999999999999999999
Q ss_pred HHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhc
Q 011130 242 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 321 (493)
Q Consensus 242 g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 321 (493)
|+.|++.+++ ++||+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++
T Consensus 243 g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 321 (503)
T PLN02467 243 GRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNI 321 (503)
T ss_pred HHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence 9999999988 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEE
Q 011130 322 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 399 (493)
Q Consensus 322 ~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v 399 (493)
++|||.|+++++||++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|
T Consensus 322 ~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v 401 (503)
T PLN02467 322 KISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCV 401 (503)
T ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEE
Confidence 9999999999999999999999999999999999999999997532 36899999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhh
Q 011130 400 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 479 (493)
Q Consensus 400 ~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~ 479 (493)
++|+|.||||+++|+++|||+++|||+|.+.+.++++++++|+||||+.+...+.+||||+|+||+|+++|.+++++|++
T Consensus 402 ~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 481 (503)
T PLN02467 402 KTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLS 481 (503)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999977667789999999999999999999999999
Q ss_pred ceEEEEeC
Q 011130 480 VKAVVTAL 487 (493)
Q Consensus 480 ~k~v~~~~ 487 (493)
.|+++..+
T Consensus 482 ~k~i~~~~ 489 (503)
T PLN02467 482 VKQVTKYI 489 (503)
T ss_pred eEEEEEec
Confidence 99999864
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-84 Score=683.01 Aligned_cols=421 Identities=51% Similarity=0.891 Sum_probs=393.9
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCC-CCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~-~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. .|+ ++|.++|.++|++++++|+++.
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~ 85 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL 85 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence 47899999998766788999999999999999999999999999999999972 399 9999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...++.++|+|||
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 999999999999998665445999999999999999988766544433344567899999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++.+.++++.|+.||++|.|+||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 89999999777888999999999999999999999999998874
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++||++++.+++++.++|++++.+|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|++|||++
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 405 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKR 405 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999865557899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+|+++|||+++|||+|.+.+.++++++++|+|+||+.+...+.+||||+|+||+|+++|.+++++||+.|++++.+
T Consensus 406 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~~ 481 (481)
T cd07143 406 ANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHINL 481 (481)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEeC
Confidence 9999999999999999999999999999999999998777888999999999999999999999999999998753
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-84 Score=684.43 Aligned_cols=417 Identities=27% Similarity=0.453 Sum_probs=389.4
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
+...++||||+|+. ++.+++++||.||+++++++.++.+|+++||++|++||+ .|++++..+|.++|++++++|++
T Consensus 18 ~~~~~~~I~G~~~~--~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 93 (508)
T PLN02315 18 SRNLGCYVGGEWRA--NGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRA 93 (508)
T ss_pred ccccCceECCEEec--CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 44568899999985 367899999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv-------------- 207 (493)
+.++|++++++|+|||+.++. .|+..+++.++|+++.++++.+...+.. .+...+..++|+|||
T Consensus 94 ~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 172 (508)
T PLN02315 94 KLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLG 172 (508)
T ss_pred HHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence 999999999999999999997 4999999999999998887766544432 234556789999999
Q ss_pred -------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHH
Q 011130 208 -------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 244 (493)
Q Consensus 208 -------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 244 (493)
|++|+|++ +.++++.|+.||++++|+||||+++|+.
T Consensus 173 ~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~ 251 (508)
T PLN02315 173 WNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLM 251 (508)
T ss_pred HHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 89999998 7788999999999999999999999999
Q ss_pred HHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccC
Q 011130 245 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 324 (493)
Q Consensus 245 v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg 324 (493)
|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|
T Consensus 252 v~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG 330 (508)
T PLN02315 252 VQQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIG 330 (508)
T ss_pred HHHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 9998887 889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 325 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 325 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
||.++++.+||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|.+++||+||||++|++|+|
T Consensus 331 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~ 409 (508)
T PLN02315 331 DPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKT 409 (508)
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCC
Confidence 999999999999999999999999999999999999999765557899999999 5999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHH--hcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMR--ALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~--~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 481 (493)
+||||+++|+++|||+++|||+|.+.++++++ ++++|.||||+.+. ..+.+||||+|+||+|+++|.+++++||+.|
T Consensus 410 ~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k 489 (508)
T PLN02315 410 LEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRS 489 (508)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEE
Confidence 99999999999999999999999999999985 79999999998644 3478999999999999999999999999999
Q ss_pred EEEEeC
Q 011130 482 AVVTAL 487 (493)
Q Consensus 482 ~v~~~~ 487 (493)
+|++..
T Consensus 490 ~v~~~~ 495 (508)
T PLN02315 490 TCTINY 495 (508)
T ss_pred EEEEec
Confidence 998775
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-84 Score=685.58 Aligned_cols=417 Identities=41% Similarity=0.684 Sum_probs=389.4
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
+++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|+++.+
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLE 78 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 3679999999877788999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------ 207 (493)
+|++++++|+|||..++...|+..+++.++++++.+++..+...+...+...++.++|+|||
T Consensus 79 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 158 (479)
T cd07116 79 MLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLA 158 (479)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHH
Confidence 99999999999999988756999999999999998877665544433445678899999999
Q ss_pred ----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC
Q 011130 208 ----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253 (493)
Q Consensus 208 ----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~ 253 (493)
|++|+|++.+.+++..|+.||+||+|+||||+++|+.|++.+++ +
T Consensus 159 ~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~ 237 (479)
T cd07116 159 PALAAGNCVVLKPAEQTPASILVLMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-N 237 (479)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHHCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-C
Confidence 89999998777889999999999999999999999999999988 8
Q ss_pred CCceeEecCCCCceEEccC------CCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 254 LKPVTLELGGKSPFIVCED------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 254 ~~pv~lelgG~~p~iV~~d------aDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
+||+++|||||||+||++| ||+|.|++.++.+. +|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (479)
T cd07116 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL 316 (479)
T ss_pred CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999988 79999999999864 6999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
++++.+||++++.+++++.++|++++++|+++++||.... ..|+|+.|||+.+++ +|.+++||+||||++|++|+
T Consensus 317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~ 395 (479)
T cd07116 317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFK 395 (479)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeC
Confidence 9999999999999999999999999999999999997532 368999999999874 99999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
|+||||+++|+++|||+++|||+|.+.+.++++++++|.||||+++...+.+||||+|+||+|+++|.++|++|++.|++
T Consensus 396 ~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~ 475 (479)
T cd07116 396 DEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNL 475 (479)
T ss_pred CHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999998877778899999999999999999999999999999
Q ss_pred EEeC
Q 011130 484 VTAL 487 (493)
Q Consensus 484 ~~~~ 487 (493)
++++
T Consensus 476 ~~~~ 479 (479)
T cd07116 476 LVSY 479 (479)
T ss_pred EEeC
Confidence 8753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-84 Score=684.17 Aligned_cols=415 Identities=38% Similarity=0.622 Sum_probs=388.4
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCC-CCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~-w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ . |+++|.++|.++|++++++|+++.+
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 77 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD 77 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 5799999996 568899999999999999999999999999999999998 7 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC----CCCceeEEEeeeeeeE--------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~PlGVv-------------- 207 (493)
+|++++++|+|||..++...|+..+++.+++++..+++..+...+. ..+...+..++|+|||
T Consensus 78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~ 157 (481)
T TIGR03216 78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT 157 (481)
T ss_pred HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence 9999999999999988865599999999999999887765544321 1134567889999999
Q ss_pred ---------------------------------------eEEEeeeCCcc-chhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~-~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++.+. ++++.|..||+||+|+||||+.+|+.|++
T Consensus 158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 89999998655 47888999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.
T Consensus 238 ~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9988 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-----CCCceeeceEEecCCCCccccccccccceEEEEEe
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 402 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 402 (493)
++++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999999997532 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 011130 403 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482 (493)
Q Consensus 403 ~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 482 (493)
+|.||||+++|+++|||+++|||+|.+.+.++++++++|.||||+....++.+||||+|+||+|+++|.+++++|++.|+
T Consensus 397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~ 476 (481)
T TIGR03216 397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTN 476 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999877777889999999999999999999999999999
Q ss_pred EEEe
Q 011130 483 VVTA 486 (493)
Q Consensus 483 v~~~ 486 (493)
++++
T Consensus 477 v~~~ 480 (481)
T TIGR03216 477 VCIK 480 (481)
T ss_pred EEEe
Confidence 9765
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-84 Score=683.85 Aligned_cols=419 Identities=37% Similarity=0.640 Sum_probs=393.2
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+.++||||+|+.+ ++++++++||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++++
T Consensus 2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 78 (475)
T PRK13473 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENA 78 (475)
T ss_pred CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999875 678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||..++...|+..+++.+++++..++.+.+...+. ..+...++.++|+|||
T Consensus 79 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~ 158 (475)
T PRK13473 79 DEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWK 158 (475)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHH
Confidence 99999999999999988865599999999999998888776543321 1233467889999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++.+.++++.|+.|++||+|+||||+++|+.|++.++.
T Consensus 159 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~ 238 (475)
T PRK13473 159 LAPALAAGNTVVLKPSEITPLTALKLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238 (475)
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHHHhCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 89999999777889999999999999999999999999999988
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 239 -~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 239 -SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCC-CEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~g-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
++||++++.+++++.++|+++.++| +++++||......|+|++|||+.++++++.++++|+||||++|++|+|+||||+
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~ 397 (475)
T PRK13473 318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVR 397 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHH
Confidence 9999999999999999999999999 999999986544689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.+.+.++++++++|+|+||++....+.+||||+|+||+|+++|.+++++||+.|++++..
T Consensus 398 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 398 WANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999999998777788999999999999999999999999999998753
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-84 Score=682.15 Aligned_cols=416 Identities=42% Similarity=0.718 Sum_probs=390.9
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+.+.++.+++++||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 79 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE 79 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876678899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhH-HhcCccCCCCCCceeEEEeeeeeeE------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD-KIQGLTAPADGPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~-~~~~~~~~~~~~~~~~~~~~PlGVv------------------ 207 (493)
|++++++|+|||..+++ .|+..+++.++++++.++ ...+...+.. ....++.++|+|||
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 99999999999999998 499999999999998877 3444333332 34567889999999
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~ 252 (493)
|++|+|++.+.+.++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~- 236 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD- 236 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-
Confidence 89999998777788899999999999999999999999999988
Q ss_pred CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCc
Q 011130 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332 (493)
Q Consensus 253 ~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~ 332 (493)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (488)
T TIGR02299 237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316 (488)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-------CCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
+||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 396 (488)
T TIGR02299 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDE 396 (488)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCH
Confidence 99999999999999999999999999999996532 25899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
+|||+++|+++|||+++|||+|.+.++++++++++|+||||+.....+.+||||+|+||+|+++|.+++++|++.|++++
T Consensus 397 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~ 476 (488)
T TIGR02299 397 EEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL 476 (488)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEE
Confidence 99999999999999999999999999999999999999999877667789999999999999999999999999999988
Q ss_pred eC
Q 011130 486 AL 487 (493)
Q Consensus 486 ~~ 487 (493)
++
T Consensus 477 ~~ 478 (488)
T TIGR02299 477 AL 478 (488)
T ss_pred ec
Confidence 75
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-83 Score=678.79 Aligned_cols=417 Identities=43% Similarity=0.745 Sum_probs=393.5
Q ss_pred eeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 011130 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (493)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela 148 (493)
||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+++.|+++|..+|.++|++++++|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 69999997666788999999999999999999999999999999999975569999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------------
Q 011130 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------------- 207 (493)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------------- 207 (493)
+++++|+|||..+++. |+..+++.+++++.+.++..+...+...+...++.++|+|||
T Consensus 81 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999985 999999999999998887666544433455678999999999
Q ss_pred --------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCC
Q 011130 208 --------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 255 (493)
Q Consensus 208 --------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~ 255 (493)
|++|+|++.+.+.++.|+.||++|+|+||||+.+|+.|++.+++ +++
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~ 238 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVK 238 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 99999998777788999999999999999999999999999988 899
Q ss_pred ceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCcccc
Q 011130 256 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 335 (493)
Q Consensus 256 pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gp 335 (493)
|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||
T Consensus 239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp 318 (482)
T cd07119 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP 318 (482)
T ss_pred cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 336 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 336 li~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|+||||++
T Consensus 319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 398 (482)
T cd07119 319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRL 398 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHH
Confidence 99999999999999999999999999997532 25899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+|+++|||+++|||+|.+.+.++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|++++.+
T Consensus 399 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 399 ANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999999999999999999999999999997777788999999999999999999999999999998876
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=678.48 Aligned_cols=420 Identities=62% Similarity=1.021 Sum_probs=393.5
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+...|+++|.++|.++|++++++|+++.+
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999997667789999999999999999999999999999999999992225599999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------ 207 (493)
+|++++++|+|||..++...|+..+++.++++++++++..+...+...+...++.++|+|||
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 163 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA 163 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence 99999999999998666556999999999999999887766654443455668899999998
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~ 252 (493)
|++|+|++++.++++.|..||++|+|+||||+.+|+.|++.++..
T Consensus 164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~ 243 (476)
T cd07091 164 PALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243 (476)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 899999997778889999999999999999999999999988865
Q ss_pred CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCc
Q 011130 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332 (493)
Q Consensus 253 ~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~ 332 (493)
+++|+++|+|||||+||++|||++.|++.|++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.+++++
T Consensus 244 ~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~ 323 (476)
T cd07091 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTF 323 (476)
T ss_pred CCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 412 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 412 (493)
+||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++
T Consensus 324 ~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 403 (476)
T cd07091 324 QGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERA 403 (476)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHH
Confidence 99999999999999999999999999999998655578999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 413 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 413 n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
|+++|||+++|||+|.+.+.++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++|++.|++++
T Consensus 404 n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 404 NDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999999999987778899999999999999999999999999999853
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-83 Score=677.67 Aligned_cols=420 Identities=39% Similarity=0.668 Sum_probs=392.9
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.+.|+++|..+|.++|++++++|+++.+
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 99 (494)
T PRK09847 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAE 99 (494)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 36899999998767889999999999999999999999999999999999974469999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------ 207 (493)
+|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 100 ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (494)
T PRK09847 100 ELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLG 179 (494)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHH
Confidence 99999999999999887656999999999999999888776654443444567899999999
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~ 252 (493)
|++|+|++.+.+.++.|+.||++|.|+||||+.+|+.|.+.++..
T Consensus 180 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~ 259 (494)
T PRK09847 180 PALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259 (494)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhh
Confidence 899999997778889999999999999999999999999988733
Q ss_pred CCCceeEecCCCCceEEccCC-CHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 253 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 253 ~~~pv~lelgG~~p~iV~~da-Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
+++|+++|+|||||.||++|+ |+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 260 ~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 339 (494)
T PRK09847 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPAT 339 (494)
T ss_pred CCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999997 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
.+||++++.+++++.++|++++++| ++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||++
T Consensus 340 ~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 417 (494)
T PRK09847 340 TMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQL 417 (494)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHH
Confidence 9999999999999999999999999 999998753 35789999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+|+++|||+++|||+|.+.+.++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|++..
T Consensus 418 ~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 493 (494)
T PRK09847 418 ANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISL 493 (494)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999998777788999999999999999999999999999998754
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-83 Score=678.88 Aligned_cols=418 Identities=50% Similarity=0.832 Sum_probs=392.0
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCC-CCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~-w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.++||||+|+.+.++.+++++||+||++|++++.++.+|+++++++|++||+ . |+++|.++|.++|++++++|++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 85 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKNR 85 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 4789999999766678899999999999999999999999999999999998 6 889999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
++|++++++|+|||..++...|+..+++.++++++++++..+...+...+...+..++|+|||
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 165 (484)
T cd07144 86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL 165 (484)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence 999999999999998775445999999999999999988866544433344568899999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++.+.++++.|+.||++|+|.||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~ 245 (484)
T cd07144 166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ 245 (484)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999777889999999999999999999999999999888
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhh-cccCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGG 330 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~vg~p~~~~ 330 (493)
++||+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.+ +++|+|.+++
T Consensus 246 -~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~ 324 (484)
T cd07144 246 -NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD 324 (484)
T ss_pred -cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999985 8999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
+++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|++|
T Consensus 325 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 404 (484)
T cd07144 325 TVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEE 404 (484)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHH
Confidence 9999999999999999999999999999999997543 3689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+..++.+||||+|+||+|+++|.+++++|++.|+|+++
T Consensus 405 ai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 405 AIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999999877778899999999999999999999999999999864
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-83 Score=677.32 Aligned_cols=415 Identities=34% Similarity=0.477 Sum_probs=387.2
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+.+.++++++++||+||++|++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE 79 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876678899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv------------------ 207 (493)
|++++++|+|||+.+++. |+..+++.++|++...+...+...+. ..+...+..++|+|||
T Consensus 80 l~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 158 (478)
T cd07085 80 LARLITLEHGKTLADARG-DVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP 158 (478)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 999999999999999985 99999999999998777666654432 2244568899999999
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~ 252 (493)
|++|+|++ +.+.+..|+.||+|+.|+||||+.+|+.|++.+++
T Consensus 159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~- 236 (478)
T cd07085 159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA- 236 (478)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence 89999998 45678899999999999999999999999999887
Q ss_pred CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCc
Q 011130 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332 (493)
Q Consensus 253 ~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~ 332 (493)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.+++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 316 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD 316 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 408 (493)
+||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|.++++|+||||++|++|+|+|||
T Consensus 317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 396 (478)
T cd07085 317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEA 396 (478)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999996432 36899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEE
Q 011130 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 409 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~ 485 (493)
|+++|+++|||+++|||+|.+.++++++++++|+||||++... .+.+||||+|+||+| +++|.+++++|++.|+|++
T Consensus 397 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~ 476 (478)
T cd07085 397 IAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTS 476 (478)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999986443 467899999999999 5789999999999999976
Q ss_pred e
Q 011130 486 A 486 (493)
Q Consensus 486 ~ 486 (493)
.
T Consensus 477 ~ 477 (478)
T cd07085 477 R 477 (478)
T ss_pred e
Confidence 4
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-83 Score=672.83 Aligned_cols=414 Identities=33% Similarity=0.555 Sum_probs=388.6
Q ss_pred ceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~el 147 (493)
+||||+|+.+. +.+++++||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL 77 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999764 67899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-------------------
Q 011130 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------------- 207 (493)
++++++|+|||+.++.. |+..+++.++|++.+.+++.+...+.. .+...++.++|+|||
T Consensus 78 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 78 GRLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred HHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 99999999999999885 999999999999998888776544322 234567899999998
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|++.+. +++.|..||++|+|+||||+++|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 89999998654 889999999999999999999999999999
Q ss_pred hhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 250 ~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus 236 a~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 314 (478)
T cd07086 236 AR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE 314 (478)
T ss_pred hc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 88 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC--CCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
++++||++++.+++++.++|++++++|+++++||..... .|+|++|||+.+++++|+++++|+||||++|++|+|+||
T Consensus 315 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~de 394 (478)
T cd07086 315 GTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEE 394 (478)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHH
Confidence 999999999999999999999999999999999976443 589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHh--cceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~--l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
||+++|+++|||+++|||+|.+.+++++++ +++|+||||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 395 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~ 474 (478)
T cd07086 395 AIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCT 474 (478)
T ss_pred HHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEE
Confidence 999999999999999999999999999999 9999999998754 3578999999999999999999999999999998
Q ss_pred EeC
Q 011130 485 TAL 487 (493)
Q Consensus 485 ~~~ 487 (493)
+.+
T Consensus 475 ~~~ 477 (478)
T cd07086 475 INY 477 (478)
T ss_pred EeC
Confidence 763
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-83 Score=677.61 Aligned_cols=423 Identities=29% Similarity=0.417 Sum_probs=389.7
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHH-
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE- 141 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~- 141 (493)
.++++||||+|+.+ ++.+++++||.| |+++++++.++.+|+++||++|++||+ .|+++|..+|.++|++++++|+
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~~ 106 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLSG 106 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHh
Confidence 56788999999974 567899999997 899999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccC-CCCCCceeEEEeeee-eeE------------
Q 011130 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEPI-GVA------------ 207 (493)
Q Consensus 142 ~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~Pl-GVv------------ 207 (493)
+++++|++++++|+|||+.+++..++..+++.++|++.+++++.+... +...+...++.++|+ |||
T Consensus 107 ~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~ 186 (533)
T TIGR01236 107 PYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIA 186 (533)
T ss_pred hcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHH
Confidence 599999999999999999998763499999999999999887765433 222344568889999 998
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|+|.+.++++.|+.||+|++|+||||+++|+.|++
T Consensus 187 ~~~~~a~ALaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~ 266 (533)
T TIGR01236 187 GNLPGAPALMGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWK 266 (533)
T ss_pred HHHHHHHHHhCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999977788999999999999999999999999999
Q ss_pred HHhhcCCC------ceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhc
Q 011130 248 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 321 (493)
Q Consensus 248 ~a~~~~~~------pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 321 (493)
.+++ +++ ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 267 ~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 345 (533)
T TIGR01236 267 WVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEV 345 (533)
T ss_pred HHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcC
Confidence 9988 776 399999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCC--CEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEE
Q 011130 322 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG--AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 399 (493)
Q Consensus 322 ~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~g--a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v 399 (493)
++|+|.|+++++||++++.+++++.++|++++++| +++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v 425 (533)
T TIGR01236 346 KVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTV 425 (533)
T ss_pred CcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEE
Confidence 99999999999999999999999999999999986 7999999764446899999999999999999999999999999
Q ss_pred EEeCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHHhcc--eeEEEECCcCCC--CCCCCccCCCCCCCC-CcchH
Q 011130 400 LKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGS 471 (493)
Q Consensus 400 ~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~ 471 (493)
++|+| ++|||+++ |+++|||+++|||+|.+.+.+++++++ +|+||||..... .+.+||||+|.||+| +++|.
T Consensus 426 ~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~ 505 (533)
T TIGR01236 426 YVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGP 505 (533)
T ss_pred EEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCH
Confidence 99998 59999999 889999999999999999999999977 999999976543 367899999999998 99999
Q ss_pred HHHHhhhhceEEEEeCCCC
Q 011130 472 YSLSNYLQVKAVVTALKNP 490 (493)
Q Consensus 472 ~~l~~~~~~k~v~~~~~~~ 490 (493)
+++++|++.|++++....+
T Consensus 506 ~~l~~f~~~k~v~~~~~~~ 524 (533)
T TIGR01236 506 LNLLRWTSARSIKETFVPL 524 (533)
T ss_pred HHHHHhcceEEEEEEcccc
Confidence 9999999999998887554
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-83 Score=670.17 Aligned_cols=411 Identities=29% Similarity=0.498 Sum_probs=383.0
Q ss_pred eeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 011130 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (493)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela 148 (493)
+|||+|+.+ +++++++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++++++|+
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 77 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG 77 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999974 57899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE--------------------
Q 011130 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA-------------------- 207 (493)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv-------------------- 207 (493)
+++++|+|||+.++.. |+..+++.++|++.+.+.+.+...+.. .+...++.++|+|||
T Consensus 78 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 78 KLVSLEMGKILPEGLG-EVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 9999999999999874 999999999999988776665543322 234567889999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++. .+.++.|+.||+||+|+||||+++|+.|++.++
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 899999984 457899999999999999999999999999988
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.+++
T Consensus 236 ~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred h-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.++.+ |++++||+||||++|++|+|++|||+
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~ 393 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIA 393 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999986555689999999998766 99999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHh--cceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~--l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.+.+++++++ +++|+||||+.+. ..+.+||||+|+||+|+++|.+++++|++.|++++.+
T Consensus 394 ~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 394 WNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY 473 (474)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEec
Confidence 999999999999999999999999987 8999999998654 4578999999999999999999999999999988753
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-83 Score=671.48 Aligned_cols=413 Identities=40% Similarity=0.652 Sum_probs=386.6
Q ss_pred ccceeCCEeeeCCCCCeeeeecCC-CCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+++||||+|+.+. ..++++||. ||+++++++.++.+|++++|++|++||+ .|++++.++|.++|++++++|++|.
T Consensus 1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 76 (473)
T cd07097 1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARK 76 (473)
T ss_pred CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3679999999753 346999999 5999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.+++. |+..+++.++|++...++..+...+.. .+...++.++|+|||
T Consensus 77 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~ 155 (473)
T cd07097 77 EELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWK 155 (473)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHH
Confidence 99999999999999999986 999999999999998887766543322 345568899999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++++.+++..|+.|++|++|+||||+.+|+.|++.++
T Consensus 156 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (473)
T cd07097 156 IAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA 235 (473)
T ss_pred HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999977778999999999999999999999999999998
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+++
T Consensus 236 ~-~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 314 (473)
T cd07097 236 A-RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEG 314 (473)
T ss_pred c-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 408 (493)
+++|||+++.+++++.++|++++++|+++++||.... +.|+|++|||+.++++++++++||+||||++|++|+|++||
T Consensus 315 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 394 (473)
T cd07097 315 VDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEA 394 (473)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHH
Confidence 9999999999999999999999999999999997543 35899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEEE
Q 011130 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 409 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~ 484 (493)
|+++|+++|||+++|||+|.+.+.++++++++|+||||+++. ..+.+||||+|.||+| +++|.+++++|++.|+|+
T Consensus 395 i~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 395 LAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999999998654 3478999999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-83 Score=670.56 Aligned_cols=410 Identities=43% Similarity=0.759 Sum_probs=386.7
Q ss_pred eeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 011130 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (493)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela 148 (493)
||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 78 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA 78 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999766678999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------------
Q 011130 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------------- 207 (493)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------------- 207 (493)
+++++|+|||..++...|+..+++.++++++.+++..+...+...+...+..++|+|||
T Consensus 79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 158 (467)
T TIGR01804 79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158 (467)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999998445999999999999998888766544433334567899999998
Q ss_pred --------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCC
Q 011130 208 --------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 255 (493)
Q Consensus 208 --------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~ 255 (493)
|++|+|++.+.++++.|+.||++|+|+||||+++|+.|++.+++ ++|
T Consensus 159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~ 237 (467)
T TIGR01804 159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLK 237 (467)
T ss_pred hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 99999998767889999999999999999999999999999988 899
Q ss_pred ceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCcccc
Q 011130 256 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 335 (493)
Q Consensus 256 pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gp 335 (493)
|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||
T Consensus 238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 317 (467)
T TIGR01804 238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP 317 (467)
T ss_pred cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 336 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 336 li~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus 318 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~ 397 (467)
T TIGR01804 318 LISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIAR 397 (467)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHH
Confidence 99999999999999999999999999997543 25899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 481 (493)
+|+++|||+++|||+|.+++.++++++++|+||||+++...+.+||||+|+||+|+++|.+++++||+.|
T Consensus 398 ~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 398 ANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9999999999999999999999999999999999998777778999999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-82 Score=675.00 Aligned_cols=419 Identities=27% Similarity=0.413 Sum_probs=385.8
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
...++||||+|+. ++.+++++||+| |+++++++.++.+|++++|++|++||+ .|+++|..+|.++|++++++|++
T Consensus 31 ~~~~~~i~G~~~~--~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 106 (522)
T cd07123 31 VEIPLVIGGKEVR--TGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSG 106 (522)
T ss_pred cccCeeECCEEcC--CCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 3467899999996 467899999995 999999999999999999999999999 99999999999999999999996
Q ss_pred -hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeee-eeE------------
Q 011130 143 -HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPI-GVA------------ 207 (493)
Q Consensus 143 -~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~Pl-GVv------------ 207 (493)
++++|++++++|+|||..++...|+..+++.++|++.+++++.+...+.. .+...++.++|+ |||
T Consensus 107 ~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~ 186 (522)
T cd07123 107 KYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIG 186 (522)
T ss_pred hCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHH
Confidence 89999999999999999988655888999999999998887765433322 134568899998 998
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|+|.+.++++.|+.||+|++|+||||+++|+.|++
T Consensus 187 ~~~~~~palaGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~ 266 (522)
T cd07123 187 GNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK 266 (522)
T ss_pred HHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999977778999999999999999999999999999
Q ss_pred HHhhcCCC------ceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhc
Q 011130 248 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 321 (493)
Q Consensus 248 ~a~~~~~~------pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 321 (493)
.+++ +++ ++++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++
T Consensus 267 ~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 345 (522)
T cd07123 267 QIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI 345 (522)
T ss_pred HHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence 9987 776 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhC-CCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEE
Q 011130 322 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 400 (493)
Q Consensus 322 ~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 400 (493)
++|+|.|+++++||++++.+++++.++|++++++ |+++++||......|+|++|||+.+++++|++++||+||||++|+
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 425 (522)
T cd07123 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVY 425 (522)
T ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEE
Confidence 9999999999999999999999999999999999 999999997544468999999999999999999999999999999
Q ss_pred EeCC--HHHHHHHHHcCC-CCcEEEEecCCHHHHHHHHHhc--ceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHH
Q 011130 401 KYKD--LDEVIQRSNASQ-YGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSY 472 (493)
Q Consensus 401 ~~~~--~~eai~~~n~~~-~gl~a~v~t~d~~~~~~~~~~l--~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~ 472 (493)
+|++ +||+|+++|++. |||++||||+|.+.+.++++++ ++|+||||+.+.. .+.+||||+|+||+| +++|.+
T Consensus 426 ~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~ 505 (522)
T cd07123 426 VYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPL 505 (522)
T ss_pred EeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHH
Confidence 9984 799999999985 9999999999999999999996 5999999986543 357899999999996 999999
Q ss_pred HHHhhhhceEEEEeC
Q 011130 473 SLSNYLQVKAVVTAL 487 (493)
Q Consensus 473 ~l~~~~~~k~v~~~~ 487 (493)
++++|++.|++++..
T Consensus 506 ~l~~~~~~k~~~~~~ 520 (522)
T cd07123 506 NLLRWVSPRTIKETF 520 (522)
T ss_pred HHHHhcceEEEEEec
Confidence 999999999987653
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-82 Score=669.85 Aligned_cols=412 Identities=40% Similarity=0.669 Sum_probs=389.1
Q ss_pred eeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 011130 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (493)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela 148 (493)
||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 78 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA 78 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999766788999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE--------------------
Q 011130 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA-------------------- 207 (493)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv-------------------- 207 (493)
+++++|+|||..+++. |+..+++.+++++.++++..+...+.. .+...+..++|+|||
T Consensus 79 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 79 KLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred HHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 9999999999999985 999999999999999887766544432 234567889999998
Q ss_pred ---------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCC
Q 011130 208 ---------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254 (493)
Q Consensus 208 ---------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~ 254 (493)
|++|+|++.+.++++.|+.||++|+|+||||+.+|+.|++.+++ ++
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~ 236 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NI 236 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cC
Confidence 89999999777788999999999999999999999999999988 89
Q ss_pred CceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccc
Q 011130 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 334 (493)
Q Consensus 255 ~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~g 334 (493)
||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++.+|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHH
Q 011130 335 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 413 (493)
Q Consensus 335 pli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n 413 (493)
|++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|
T Consensus 317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 396 (468)
T cd07088 317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAN 396 (468)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHh
Confidence 999999999999999999999999999997643 4689999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 414 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 414 ~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+++|||+++|||+|.+.++++++++++|+||||++....+..||||+|.||+|+++|++++++||+.|+|+
T Consensus 397 ~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 397 DSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999987765666799999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-82 Score=672.43 Aligned_cols=416 Identities=36% Similarity=0.566 Sum_probs=388.9
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+++||||+|+. ++.+++++||+| |++|++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.
T Consensus 33 ~~~~i~g~~~~--~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 33 YPLVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred cceeECCEEec--CCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 47899999996 457899999998 999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
++|++++++|+|||..+++. |+..+++.++|++.++++..+...+...+...++.++|+|||
T Consensus 109 ~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 187 (512)
T cd07124 109 FELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMT 187 (512)
T ss_pred HHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 99999999999999999985 999999999999999888765544433344678899999998
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++.+.++++.|+.||++|.|+||||+.+|+.|++.+++
T Consensus 188 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 267 (512)
T cd07124 188 TAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAK 267 (512)
T ss_pred HHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhc
Confidence 89999999777889999999999999999999999999998886
Q ss_pred c-----CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCC
Q 011130 252 S-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326 (493)
Q Consensus 252 ~-----~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p 326 (493)
. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|
T Consensus 268 ~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 347 (512)
T cd07124 268 VQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDP 347 (512)
T ss_pred ccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 3 58999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC--CCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 327 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
.|+++++||++++.+++++.++|++++. |+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~ 426 (512)
T cd07124 348 EDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKD 426 (512)
T ss_pred CCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCC
Confidence 9999999999999999999999999988 8999999976442 689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhce
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 481 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k 481 (493)
+||+|+++|+++|||+++|||+|.+.+.++++++++|+||||+.+.. .+.+||||+|+||+| +++|.+++++||+.|
T Consensus 427 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k 506 (512)
T cd07124 427 FDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPK 506 (512)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEE
Confidence 99999999999999999999999999999999999999999986543 367999999999999 889999999999999
Q ss_pred EEEEeC
Q 011130 482 AVVTAL 487 (493)
Q Consensus 482 ~v~~~~ 487 (493)
+|++++
T Consensus 507 ~v~~~~ 512 (512)
T cd07124 507 TVTENF 512 (512)
T ss_pred EEEEeC
Confidence 998763
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-82 Score=666.69 Aligned_cols=414 Identities=41% Similarity=0.682 Sum_probs=386.1
Q ss_pred ceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~el 147 (493)
+||||+|+.+.++++++++||+||++|++++.++.+|+++++++|++||+.+.|+++|..+|.++|++++++|++|.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999766678899999999999999999999999999999999998445999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccC-CCCCCceeEEEeeeeeeE-------------------
Q 011130 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~PlGVv------------------- 207 (493)
++++++|+|||..++...|+..+++.+++++..+++...... +...+...++.++|+|||
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 999999999999777656999999999999998877654322 222244568899999998
Q ss_pred ----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC
Q 011130 208 ----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253 (493)
Q Consensus 208 ----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~ 253 (493)
|++|+|++ +.+.++.|+.|++++.|+||||+.+|+.|++.+++ +
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~ 238 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-R 238 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-c
Confidence 89999998 56688999999999999999999999999999988 8
Q ss_pred CCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCcc
Q 011130 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 333 (493)
Q Consensus 254 ~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~ 333 (493)
+||+++|+|||||+||++|||++.|++.|++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.++++++
T Consensus 239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (471)
T cd07139 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI 318 (471)
T ss_pred CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 334 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 334 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 398 (471)
T cd07139 319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI 398 (471)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHH
Confidence 9999999999999999999999999999997543 35899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+|+++|||+++|||+|.+.+.++++++++|+|+||++. .++.+||||+|+||+|+++|.+++++||+.|+|+
T Consensus 399 ~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999865 5678999999999999999999999999999986
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-82 Score=663.00 Aligned_cols=401 Identities=28% Similarity=0.460 Sum_probs=375.8
Q ss_pred CeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 011130 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (493)
Q Consensus 81 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~ 160 (493)
++++++||+||++|++++.++.+|+++++++|++||+ .|++++.++|.++|++++++|++|.++|++++++|+|||..
T Consensus 7 ~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T PRK13968 7 THAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN 84 (462)
T ss_pred CceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH
Confidence 5788999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------------------------
Q 011130 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------------------------- 207 (493)
Q Consensus 161 ~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------------------------- 207 (493)
+++. |+..+++.++|++...++..............++.++|+|||
T Consensus 85 ~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~ 163 (462)
T PRK13968 85 QARA-EVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAP 163 (462)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9885 999999999999988776544322222345668899999999
Q ss_pred --------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCce
Q 011130 208 --------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267 (493)
Q Consensus 208 --------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~ 267 (493)
|++|+|++.+.+. ..|+.||++|+|+||||+++|+.|++.++. ++||+++|+|||||+
T Consensus 164 ~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~-~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p~ 241 (462)
T PRK13968 164 NVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGV-SQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPF 241 (462)
T ss_pred cChHHHHHHHHHHHHcCcCcCcEEEEecCchhh-HHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCce
Confidence 8999999865544 458899999999999999999999999988 899999999999999
Q ss_pred EEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHH
Q 011130 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347 (493)
Q Consensus 268 iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~ 347 (493)
||++|||++.|++.+++++|+++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+
T Consensus 242 iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 321 (462)
T PRK13968 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHH 321 (462)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCC
Q 011130 348 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427 (493)
Q Consensus 348 ~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 427 (493)
++++++.+|+++++||......|+|++|||+.+++++|.++++|+||||++|++|+|.||||+++|+++|||+++|||+|
T Consensus 322 ~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d 401 (462)
T PRK13968 322 QVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTD 401 (462)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCC
Confidence 99999999999999997644468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 428 ~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
.+.+.++++++++|+||||+....++.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 402 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 402 ETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 99999999999999999999877778899999999999999999999999999999764
|
|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-82 Score=665.06 Aligned_cols=416 Identities=40% Similarity=0.661 Sum_probs=389.8
Q ss_pred ceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
+||||+|+.+.++++++++||+| ++++++++.++.+|+++++++|++||+ .|++++.++|.++|++++++|+++.++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e 78 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE 78 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999766678999999998 689999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------------ 207 (493)
|++++++|+|||+.+++. |+..+++.+++++...+++.+...+.. .....+..++|+|||
T Consensus 79 la~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 157 (478)
T cd07131 79 LARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF 157 (478)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence 999999999999999885 999999999999998887665543322 234568899999999
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~ 252 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~- 236 (478)
T cd07131 158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR- 236 (478)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-
Confidence 89999998777789999999999999999999999999999988
Q ss_pred CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCc
Q 011130 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332 (493)
Q Consensus 253 ~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~ 332 (493)
++||+++|+|||||+||++|||++.|++.+++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 408 (493)
+||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|+|||
T Consensus 317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea 396 (478)
T cd07131 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEA 396 (478)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997542 36899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEe
Q 011130 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 409 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~ 486 (493)
|+++|+++|||+++|||+|.+.++++++++++|+||||++... .+.+||||+|+||+| +++|.+++++|++.|+|+++
T Consensus 397 i~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 397 IEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 9999999999999999999999999999999999999987653 578999999999999 88999999999999999875
Q ss_pred C
Q 011130 487 L 487 (493)
Q Consensus 487 ~ 487 (493)
+
T Consensus 477 ~ 477 (478)
T cd07131 477 Y 477 (478)
T ss_pred C
Confidence 3
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-82 Score=664.20 Aligned_cols=409 Identities=42% Similarity=0.654 Sum_probs=384.5
Q ss_pred ceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~el 147 (493)
+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l 78 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL 78 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999876678899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE--------------------
Q 011130 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA-------------------- 207 (493)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv-------------------- 207 (493)
++++++|+|||..++...|+..+++.++++++..+++..... ....+..++|+|||
T Consensus 79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999887655899999999999988877654322 23456789999998
Q ss_pred ---------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCC
Q 011130 208 ---------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254 (493)
Q Consensus 208 ---------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~ 254 (493)
|++|+|++.+.++++.|+.||+++.|+||||+.+|+.|++.++. ++
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~ 233 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TV 233 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence 89999998777789999999999999999999999999999988 89
Q ss_pred CceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccc
Q 011130 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 334 (493)
Q Consensus 255 ~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~g 334 (493)
+|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|||.++++++|
T Consensus 234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 313 (466)
T cd07138 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG 313 (466)
T ss_pred CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 335 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 335 pli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
|++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus 314 pli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 393 (466)
T cd07138 314 PLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAI 393 (466)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHH
Confidence 999999999999999999999999999986322 36899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+|+++|||+++|||+|.+.+.++++++++|+||||+.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 394 ~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 394 ANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999999999999863 5678999999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-81 Score=661.93 Aligned_cols=408 Identities=37% Similarity=0.587 Sum_probs=384.5
Q ss_pred CEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 011130 72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE 151 (493)
Q Consensus 72 G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~ 151 (493)
|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++ .|+++|..+|.++|++++++|+++.++|++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 78 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL 78 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 6788766677899999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-----------------------
Q 011130 152 TWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA----------------------- 207 (493)
Q Consensus 152 ~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv----------------------- 207 (493)
++|+|||..++.. |+..+++.+++++.+.++..+...+.. .+...++.++|+|||
T Consensus 79 ~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 157 (465)
T cd07151 79 IRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL 157 (465)
T ss_pred HHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence 9999999999885 999999999999988877765544432 244567889999999
Q ss_pred -------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCc
Q 011130 208 -------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 256 (493)
Q Consensus 208 -------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~p 256 (493)
|++|+|++++.++++.|+.||.+++|.||||+.+|+.|++.+++ ++||
T Consensus 158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~ 236 (465)
T cd07151 158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKK 236 (465)
T ss_pred CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCc
Confidence 89999998777888999999999999999999999999999998 8999
Q ss_pred eeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccC
Q 011130 257 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 336 (493)
Q Consensus 257 v~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpl 336 (493)
+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|.++++.+||+
T Consensus 237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 316 (465)
T cd07151 237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL 316 (465)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCC
Q 011130 337 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 416 (493)
Q Consensus 337 i~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 416 (493)
+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 317 i~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 393 (465)
T cd07151 317 INESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTE 393 (465)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCC
Confidence 99999999999999999999999999964 589999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 417 YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 417 ~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|||+|.+++.++++++++|+|+||+++.. .+.+||||+|+||+|+++|+++|++|++.|++++.
T Consensus 394 ~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 394 YGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred ccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999999999999999999999999999987654 46799999999999999999999999999999765
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-81 Score=658.57 Aligned_cols=398 Identities=33% Similarity=0.523 Sum_probs=375.0
Q ss_pred eeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 011130 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (493)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a 162 (493)
++++||.||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|++++++|++++++|+|||+.++
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 80 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA 80 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence 67899999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hhccHHHHHHHHHHHHHhhHHhcCccCCC---CCCceeEEEeeeeeeE--------------------------------
Q 011130 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVA-------------------------------- 207 (493)
Q Consensus 163 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~PlGVv-------------------------------- 207 (493)
.. |+..+++.++|++..+++........ ......++.++|+|||
T Consensus 81 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 81 KA-EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 75 99999999999999887765443211 1234568889999999
Q ss_pred ---------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCc
Q 011130 208 ---------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266 (493)
Q Consensus 208 ---------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p 266 (493)
|++|+|++ +.+.+..|+.|+++++|+||||+++|+.|++.+++ ++||+++|+|||||
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~ 237 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP 237 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence 89999986 44567889999999999999999999999999888 89999999999999
Q ss_pred eEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHH
Q 011130 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 346 (493)
Q Consensus 267 ~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~ 346 (493)
+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.
T Consensus 238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~ 317 (457)
T PRK09406 238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE 317 (457)
T ss_pred eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecC
Q 011130 347 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426 (493)
Q Consensus 347 ~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 426 (493)
++|++++++|+++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+|++|+|+++|+++|||+++|||+
T Consensus 318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 397 (457)
T PRK09406 318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTR 397 (457)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 99999999999999999865557999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 427 d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
|.+.+.++++++++|+||||+++...+.+||||+|+||+|+++|.+++++||+.|+|++
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 99999999999999999999988778889999999999999999999999999999865
|
|
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=660.59 Aligned_cols=404 Identities=42% Similarity=0.708 Sum_probs=381.5
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.
T Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (480)
T cd07111 21 SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQKHQ 98 (480)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999999866678899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
++|++++++|+|||+.+++..|+..+++.+++++++.+...+. +..++|+|||
T Consensus 99 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~----------~~~~~P~GVV~~I~PwN~P~~~~~~~i 168 (480)
T cd07111 99 RLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDTE----------LAGWKPVGVVGQIVPWNFPLLMLAWKI 168 (480)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----------cccceecceEEEECCCccHHHHHHHHH
Confidence 9999999999999999987558999999999999887754321 3457899998
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++.+ +.+..|+.||++|.|+||||+.+|+.|++.+++
T Consensus 169 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 169 CPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999854 678899999999999999999999999999988
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|+|||||+||++|+|+|.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 248 -~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 -TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred -cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 327 ~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 406 (480)
T cd07111 327 DMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVAL 406 (480)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHH
Confidence 99999999999999999999999999999998754456899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 482 (493)
+|+++|||+++|||+|.+.+.++++++++|+|+||+.....+.+||||+|+||+|+++|.+++++||+.|+
T Consensus 407 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 407 ANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 99999999999999999999999999999999999987777889999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-81 Score=660.43 Aligned_cols=416 Identities=30% Similarity=0.455 Sum_probs=381.9
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
.+||||+|+.+ ++++++++||+||+++++++.++.+++++++++|++||+ .|+++|..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE 78 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence 47999999975 467899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------- 207 (493)
|++++++|+|||..+++. |+..+++.+++++.+..+..+...+...+...++.++|+|||
T Consensus 79 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 79 LAEVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 999999999999999985 999999999999887766555433322344568899999999
Q ss_pred ----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC
Q 011130 208 ----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253 (493)
Q Consensus 208 ----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~ 253 (493)
|++|+|++ +.+.++.|+.||+||+|+||||+++|+.|++.++...
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 89999998 6678899999999999999999999999999877634
Q ss_pred CCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhH-HHHHHHHHHHHhhcccCCCC-CCCC
Q 011130 254 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPF-KGGI 331 (493)
Q Consensus 254 ~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~vg~p~-~~~~ 331 (493)
.+++++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++| |+|+++|+++++++++|||+ ++.+
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 678999999999999999999999999999999999999999999999999998 99999999999999999996 7889
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++||+++..+++++.++|++++++|+++++||...++.|+|++|||+ +++++|++++||+||||++|++|+|+||||++
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~ 395 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRL 395 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999988655556899999999 68999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 489 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~ 489 (493)
+|+++|||+++|||+|.+.++++++++++|+|+||+... ..+.+||||+|+||+|+++|..+ .+|++.|+++..+..
T Consensus 396 ~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~~~ 473 (487)
T PRK09457 396 ANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLESDS 473 (487)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEeccc
Confidence 999999999999999999999999999999999997644 34678999999999999999544 559999999988644
|
|
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-81 Score=663.41 Aligned_cols=417 Identities=33% Similarity=0.526 Sum_probs=386.0
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCC-CCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
...++||||+|+.+ +.++.++||+ ||+++++++.++.+|++++|++|++||+ .|+++|.++|.++|++++++|++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 106 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMER 106 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 44578999999964 4678999999 5999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv-------------- 207 (493)
++++|++++++|+|||..++.. |+..+++.++|+++++++..+...+. ..+...++.++|+|||
T Consensus 107 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~ 185 (511)
T TIGR01237 107 RRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV 185 (511)
T ss_pred CHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence 9999999999999999999885 99999999999999888776543322 2234567889999999
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||++++|.||||+.+|+.|++.
T Consensus 186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999777889999999999999999999999999998
Q ss_pred Hhh-----cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc
Q 011130 249 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323 (493)
Q Consensus 249 a~~-----~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v 323 (493)
++. .+++|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 872 278999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 324 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
|+|.++.+++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|+++++|+||||++|++|+
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 999999999999999999999999999999888 8999886544468999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCCC-cchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR-EKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~ 480 (493)
|+||||+++|+++|||+++|||+|.+.+.++++++++|+||||++... .+.+||||+|+||+|+ ++|.+++++|++.
T Consensus 425 ~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~ 504 (511)
T TIGR01237 425 DFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQP 504 (511)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcce
Confidence 999999999999999999999999999999999999999999987543 3568999999999995 7999999999999
Q ss_pred eEEEEe
Q 011130 481 KAVVTA 486 (493)
Q Consensus 481 k~v~~~ 486 (493)
|+++.+
T Consensus 505 k~v~~~ 510 (511)
T TIGR01237 505 KTVTEN 510 (511)
T ss_pred EEEEEe
Confidence 999765
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-81 Score=656.85 Aligned_cols=393 Identities=38% Similarity=0.661 Sum_probs=371.9
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG 78 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999985
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------------------------------ 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------------------------------ 207 (493)
|+..+++.++|++.+.+++.+...+.. .+...+..++|+|||
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (448)
T TIGR01780 79 -EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP 157 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence 999999999999988877766544322 344567789999999
Q ss_pred -----------------eEEEeeeCC-ccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEE
Q 011130 208 -----------------GVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 269 (493)
Q Consensus 208 -----------------gvv~vv~~~-~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV 269 (493)
|++|+|++. +.+.++.|+.||++++|+||||+.+|+.|++.++. ++||+++|+|||||+||
T Consensus 158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEE
Confidence 999999987 67788999999999999999999999999999988 89999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 011130 270 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 349 (493)
Q Consensus 270 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i 349 (493)
++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 011130 350 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429 (493)
Q Consensus 350 ~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 429 (493)
++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|++|+|+++|+++|||+++|||+|.+
T Consensus 317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~ 396 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA 396 (448)
T ss_pred HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 99999999999999765456899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 011130 430 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481 (493)
Q Consensus 430 ~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 481 (493)
.++++++++++|.||||+....++.+||||+|+||+|+++|.+++++|++.|
T Consensus 397 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 397 TIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 9999999999999999997766778999999999999999999999999876
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-81 Score=656.38 Aligned_cols=399 Identities=40% Similarity=0.677 Sum_probs=377.0
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||.||++|++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||+.++..
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLG 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 579999999999999999999999999999999 999999999999999999999999999999999999999999874
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------- 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------- 207 (493)
|+..+++.++|++.+.+.+.+...+.......++.++|+|||
T Consensus 79 -ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~ 157 (456)
T cd07107 79 -DVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence 999999999999988877776655544445667899999999
Q ss_pred ---------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccC
Q 011130 208 ---------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 272 (493)
Q Consensus 208 ---------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~d 272 (493)
|++|+|++++.++++.|+.||++++|+||||+++|+.|++.+++ +++|+++|+|||||+||++|
T Consensus 158 ~~~~l~~~~~~~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~d 236 (456)
T cd07107 158 SALRLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFPD 236 (456)
T ss_pred HHHHHHHHHHHhCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECCC
Confidence 99999998777788999999999999999999999999999888 89999999999999999999
Q ss_pred CCHHHHHHHHHHHH-HhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 273 ADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 273 aDl~~aa~~i~~~~-~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
||+|.|++.|++++ |.++||.|+++++||||+++||+|+++|++++.++++|+|.++++++||++++.+++++.++|++
T Consensus 237 adl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~ 316 (456)
T cd07107 237 ADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDS 316 (456)
T ss_pred CCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHH
Confidence 99999999999995 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCC
Q 011130 352 GVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427 (493)
Q Consensus 352 a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 427 (493)
++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d 396 (456)
T cd07107 317 AKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTND 396 (456)
T ss_pred HHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCC
Confidence 9999999999996532 358999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 428 ~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+++++||+.|++++++
T Consensus 397 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 456 (456)
T cd07107 397 ISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVRL 456 (456)
T ss_pred HHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEeC
Confidence 999999999999999999998777788999999999999999999999999999998753
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-80 Score=656.82 Aligned_cols=417 Identities=31% Similarity=0.450 Sum_probs=384.7
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~ 91 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH 91 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 556899999999766678899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCc--cC-----CCC-CCceeEEEeeeeeeE--------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TA-----PAD-GPYHVQTLHEPIGVA-------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~--~~-----~~~-~~~~~~~~~~PlGVv-------- 207 (493)
+++|++++++|+|||..++.. |+..+++.++|++..+.+.... .. +.. .+...++.++|+|||
T Consensus 92 ~~el~~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~ 170 (496)
T PLN00412 92 KAPIAECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY 170 (496)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence 999999999999999999974 9999999999998776654321 11 111 123457889999999
Q ss_pred ---------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHH
Q 011130 208 ---------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 242 (493)
Q Consensus 208 ---------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g 242 (493)
|++|+|++.+.+.++.|..||+|+.|.|||| .+|
T Consensus 171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g 249 (496)
T PLN00412 171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249 (496)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence 9999999877778999999999999999999 999
Q ss_pred HHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcc
Q 011130 243 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322 (493)
Q Consensus 243 ~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 322 (493)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++++++
T Consensus 250 ~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 250 IAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 99998764 589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEe
Q 011130 323 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 402 (493)
Q Consensus 323 vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 402 (493)
+|+|.+ ++++||++++.+++++.++|++++..|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 999987 789999999999999999999999999999997753 6899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 011130 403 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481 (493)
Q Consensus 403 ~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 481 (493)
+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus 403 ~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k 482 (496)
T PLN00412 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVK 482 (496)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceE
Confidence 999999999999999999999999999999999999999999998754 3457999999999999999999999999999
Q ss_pred EEEEeCCCCC
Q 011130 482 AVVTALKNPA 491 (493)
Q Consensus 482 ~v~~~~~~~~ 491 (493)
++++++..+.
T Consensus 483 ~i~~~~~~~~ 492 (496)
T PLN00412 483 STVINLPKPS 492 (496)
T ss_pred EEEEecCCCC
Confidence 9998875543
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-80 Score=655.31 Aligned_cols=414 Identities=30% Similarity=0.440 Sum_probs=386.0
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+.+.++++++++||.||++|++++.++.+|+++++++|++||+ .|+++|..+|.++|.+++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE 79 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999776678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------------ 207 (493)
|+++++.|+|||+.++.. |+..+++.++|++...+.+.+...+.. .+...+..++|+|||
T Consensus 80 l~~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 80 IAELITAEHGKTHSDALG-DVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred HHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 999999999999999985 999999999999988877766543321 234567889999998
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~ 252 (493)
|++|+|++ +.+.++.|+.||+|++|+||||+.+|+.|++.++.
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~- 236 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA- 236 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-
Confidence 89999998 45668889999999999999999999999999887
Q ss_pred CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCc
Q 011130 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 332 (493)
Q Consensus 253 ~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~ 332 (493)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++ |+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~ 315 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE 315 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc--C--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 408 (493)
+||+++..+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|.++++|+||||++|++|+|++||
T Consensus 316 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ea 395 (477)
T TIGR01722 316 MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEA 395 (477)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHH
Confidence 9999999999999999999999999999999752 1 35899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEE
Q 011130 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 409 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~ 485 (493)
|+++|+++|||+++|||+|.+.++++++++++|.||||+.... .+.+||||+|+||+| +++|.+++++||+.|++++
T Consensus 396 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~ 475 (477)
T TIGR01722 396 IALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTT 475 (477)
T ss_pred HHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEE
Confidence 9999999999999999999999999999999999999985443 467899999999999 5889999999999999987
Q ss_pred e
Q 011130 486 A 486 (493)
Q Consensus 486 ~ 486 (493)
.
T Consensus 476 ~ 476 (477)
T TIGR01722 476 R 476 (477)
T ss_pred e
Confidence 5
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-81 Score=651.57 Aligned_cols=398 Identities=35% Similarity=0.587 Sum_probs=374.6
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||+++++++.++.+|+++||+.|++||+.+.|+. +..+|.++|++++++|++|+++|++++++|+|||..++..
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999998434998 9999999999999999999999999999999999999985
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------- 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------- 207 (493)
|+..+++.++|+++++++..+...+...+...++.++|+|||
T Consensus 80 -Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 -EISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 999999999999998888766544333345678899999999
Q ss_pred -----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 -----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 -----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++|+|++.+.++++.|+.||+++.|.||||+.+|+.|++.++. ++||+++|+|||||+||+
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~ 237 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF 237 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEEC
Confidence 88999998777789999999999999999999999999999988 899999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
+|+|+|.|++.|++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 317 (455)
T cd07120 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE 317 (455)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEeCCcccC---CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCC
Q 011130 351 SGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427 (493)
Q Consensus 351 ~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 427 (493)
+++++|+++++||...+ ..|+|++|||+.+++++|.++++|+||||++|++|+|.||||+++|.++|||+++|||+|
T Consensus 318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d 397 (455)
T cd07120 318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRD 397 (455)
T ss_pred HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999886433 268999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 428 ~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
.+.++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|++++
T Consensus 398 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 398 LARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 9999999999999999999987777889999999999999999999999999999863
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-80 Score=653.03 Aligned_cols=408 Identities=32% Similarity=0.473 Sum_probs=378.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++|+. .++..+|.++|.+++++|+++.
T Consensus 3 ~~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~ 75 (472)
T TIGR03250 3 AEALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARK 75 (472)
T ss_pred CCCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhH
Confidence 347899999985 457899999999999999999999999999999998764 6789999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC-----CCCCceeEEEeeee-eeE-----------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPI-GVA----------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~Pl-GVv----------- 207 (493)
++|++++++|+|||+.++.. |+..+++.++|++.++.+..+...+ .......++.++|+ |||
T Consensus 76 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~ 154 (472)
T TIGR03250 76 EEISDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMN 154 (472)
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHH
Confidence 99999999999999999885 9999999999999988776654322 12234568899998 998
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++.+.+.+..|+.||++++|.||||+.+|+.|
T Consensus 155 ~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i 234 (472)
T TIGR03250 155 QVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI 234 (472)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 99999998777788999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 235 ~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~ 311 (472)
T TIGR03250 235 AARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGD 311 (472)
T ss_pred HHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCC
Confidence 98764 589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
|.++++++||++++.++++++++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|.
T Consensus 312 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 388 (472)
T TIGR03250 312 PMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDI 388 (472)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCH
Confidence 9999999999999999999999999999999999999864 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCC-CCCCccCCCCCCCC-CcchHHHHHhhhhceEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 483 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~-~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v 483 (493)
+|||+++|+++|||+++|||+|.+.+.++++++++|+||||+.+... +.+||||+|+||+| +++|.+++++|++.|++
T Consensus 389 ~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i 468 (472)
T TIGR03250 389 DDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTY 468 (472)
T ss_pred HHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999876544 55899999999999 67889999999999999
Q ss_pred EEe
Q 011130 484 VTA 486 (493)
Q Consensus 484 ~~~ 486 (493)
+++
T Consensus 469 ~~~ 471 (472)
T TIGR03250 469 SLP 471 (472)
T ss_pred EEe
Confidence 765
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=658.45 Aligned_cols=416 Identities=33% Similarity=0.550 Sum_probs=384.3
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCC-CCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
...++||||+|+.+ +.+++++||+ ||++|++++.++.+|++++|++|++||+ .|++++..+|.++|++++++|++
T Consensus 35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 110 (514)
T PRK03137 35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRR 110 (514)
T ss_pred cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 34578999999963 5789999999 6999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhc-CccCCCCCCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ-GLTAPADGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~-~~~~~~~~~~~~~~~~~PlGVv-------------- 207 (493)
+.++|++++++|+|||+.+++. |+..+++.++|++..+++.. +.......+...++.++|+|||
T Consensus 111 ~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~ 189 (514)
T PRK03137 111 RKHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMA 189 (514)
T ss_pred CHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence 9999999999999999999985 99999999999999887764 2222222344568899999999
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 269 (514)
T PRK03137 190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYER 269 (514)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHH
Confidence 99999999777889999999999999999999999999998
Q ss_pred Hhhc-----CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc
Q 011130 249 AAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323 (493)
Q Consensus 249 a~~~-----~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v 323 (493)
+++. ++||+++|+|||||+||++|||++.|++.|++++|.++||.|+++++||||++++|+|+++|+++++++++
T Consensus 270 aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~ 349 (514)
T PRK03137 270 AAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTV 349 (514)
T ss_pred HhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence 8741 57999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 324 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
|+|.++. ++||++++.+++++.++|+++++. +++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 350 g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 427 (514)
T PRK03137 350 GNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427 (514)
T ss_pred CCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecC
Confidence 9999998 999999999999999999999887 69999997655568999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~ 480 (493)
|++|||+++|+++|||+++|||+|.+.++++++++++|+||||+.+.. .+.+||||+|.||+| +++|.+++++||+.
T Consensus 428 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~ 507 (514)
T PRK03137 428 DFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQA 507 (514)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceE
Confidence 999999999999999999999999999999999999999999986543 356899999999999 79999999999999
Q ss_pred eEEEEe
Q 011130 481 KAVVTA 486 (493)
Q Consensus 481 k~v~~~ 486 (493)
|+|+..
T Consensus 508 k~v~~~ 513 (514)
T PRK03137 508 KTVSEM 513 (514)
T ss_pred EEEEEe
Confidence 998754
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-80 Score=655.17 Aligned_cols=417 Identities=33% Similarity=0.540 Sum_probs=387.4
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCC-CCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~ 141 (493)
+..+++||||+|+. ++.+++++||. ||+++++++.++.+|++++|++|++||+ .|+++|.++|.++|++++++|+
T Consensus 16 ~~~~~~~i~g~~~~--~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 91 (500)
T cd07083 16 GRAYPLVIGGEWVD--TKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADLLR 91 (500)
T ss_pred cccccceECCEEec--CCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 44568899999996 35678999998 6999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccC--CCCCCceeEEEeeeeeeE------------
Q 011130 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVA------------ 207 (493)
Q Consensus 142 ~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~PlGVv------------ 207 (493)
++.++|++++++|+|||+.++.. |+..+++.++++++++.+..+... +...+...++.++|+|||
T Consensus 92 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 170 (500)
T cd07083 92 RRRRELIATLTYEVGKNWVEAID-DVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAI 170 (500)
T ss_pred hCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHH
Confidence 99999999999999999999875 999999999999998887765432 222344567889999998
Q ss_pred -----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHH
Q 011130 208 -----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246 (493)
Q Consensus 208 -----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 246 (493)
|++|+|++.+.++++.|+.||+||.|+||||+.+|+.|+
T Consensus 171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~ 250 (500)
T cd07083 171 FTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIY 250 (500)
T ss_pred HHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 899999997788899999999999999999999999999
Q ss_pred HHHhhcCC------CceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhh
Q 011130 247 QLAAKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 320 (493)
Q Consensus 247 ~~a~~~~~------~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 320 (493)
+.+++ ++ +|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.+
T Consensus 251 ~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 329 (500)
T cd07083 251 EAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAER 329 (500)
T ss_pred HHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHc
Confidence 99887 65 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEE
Q 011130 321 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 400 (493)
Q Consensus 321 ~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 400 (493)
+++|||.++++++||++++.+++++.++|+++++.| ++++||......|+|+.|||+.+++++|++++||+||||++|+
T Consensus 330 ~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~ 408 (500)
T cd07083 330 LSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVI 408 (500)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEE
Confidence 999999999999999999999999999999998887 9999997655568999999999999999999999999999999
Q ss_pred EeC--CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCC--CCCCccCCCCCCCC-CcchHHHHH
Q 011130 401 KYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLS 475 (493)
Q Consensus 401 ~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~ 475 (493)
+|+ |++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+... +.+||||+|.||+| +++|.++++
T Consensus 409 ~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~ 488 (500)
T cd07083 409 RYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLR 488 (500)
T ss_pred EeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHH
Confidence 999 9999999999999999999999999999999999999999999875543 56899999999999 689999999
Q ss_pred hhhhceEEEEe
Q 011130 476 NYLQVKAVVTA 486 (493)
Q Consensus 476 ~~~~~k~v~~~ 486 (493)
+|++.|+++..
T Consensus 489 ~~~~~k~~~~~ 499 (500)
T cd07083 489 RFLEMKAVAER 499 (500)
T ss_pred HhhheeEEEEc
Confidence 99999998765
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-80 Score=648.33 Aligned_cols=393 Identities=41% Similarity=0.656 Sum_probs=370.8
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF 78 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999875
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------- 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------- 207 (493)
|+..+++.++++++... .+...+...+...+..++|+|||
T Consensus 79 -ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 155 (446)
T cd07106 79 -EVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL 155 (446)
T ss_pred -HHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999988753 22222222345678999999998
Q ss_pred ---------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccC
Q 011130 208 ---------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 272 (493)
Q Consensus 208 ---------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~d 272 (493)
|++|+|++ +.+++..|+.|+++|.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|
T Consensus 156 ~~~~l~~~~~~~lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~d 233 (446)
T cd07106 156 CTLKLGELAQEVLPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLPD 233 (446)
T ss_pred HHHHHHHHHHHhCCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECCC
Confidence 89999998 45688999999999999999999999999999988 89999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHH
Q 011130 273 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 352 (493)
Q Consensus 273 aDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a 352 (493)
||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 234 ADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a 313 (446)
T cd07106 234 VDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDA 313 (446)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 011130 353 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432 (493)
Q Consensus 353 ~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 432 (493)
+.+|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus 314 ~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 393 (446)
T cd07106 314 KAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAE 393 (446)
T ss_pred HHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 99999999999765556899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 433 ~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
++++++++|+|+||++....+.+||||+|+||+|+++|.+++++||+.|+|+
T Consensus 394 ~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 394 AVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 9999999999999998877889999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-80 Score=647.81 Aligned_cols=404 Identities=48% Similarity=0.810 Sum_probs=379.5
Q ss_pred CeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 011130 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (493)
Q Consensus 81 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~ 160 (493)
.+++++||+||++|++++.++.+|+++++++|++||+.+.|+++|.++|.++|++++++|+++.++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 46889999999999999999999999999999999974469999999999999999999999999999999999999999
Q ss_pred hhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------------------------
Q 011130 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------------------------- 207 (493)
Q Consensus 161 ~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------------------------- 207 (493)
++...|+..+++.++|++.+++++.+...+...+...++.++|+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~ 161 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE 161 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence 88655999999999999999887766544433445677899999999
Q ss_pred --------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCce
Q 011130 208 --------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267 (493)
Q Consensus 208 --------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~ 267 (493)
|++|+|++.+.++++.|+.|+++++|.||||+.+|+.|++.++..++||+++|+|||||+
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~ 241 (462)
T cd07112 162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN 241 (462)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence 899999997778899999999999999999999999999988843889999999999999
Q ss_pred EEccCC-CHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHH
Q 011130 268 IVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 346 (493)
Q Consensus 268 iV~~da-Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~ 346 (493)
||++|+ |++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.
T Consensus 242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 321 (462)
T cd07112 242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVL 321 (462)
T ss_pred EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEe
Q 011130 347 KYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424 (493)
Q Consensus 347 ~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 424 (493)
++|++++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||+++||
T Consensus 322 ~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 401 (462)
T cd07112 322 GYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVW 401 (462)
T ss_pred HHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEE
Confidence 999999999999999987532 258999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 425 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 425 t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
|+|.+.+.++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 402 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 402 TSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred cCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 999999999999999999999998777788999999999999999999999999999885
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-80 Score=649.19 Aligned_cols=400 Identities=50% Similarity=0.876 Sum_probs=379.3
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||++|++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ 78 (453)
T cd07115 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARR 78 (453)
T ss_pred CCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 369999999999999999999999999999999 999999999999999999999999999999999999999999875
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------- 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------- 207 (493)
.|+..+++.+++++.++++..+...+...+...++.++|+|||
T Consensus 79 ~ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~ 158 (453)
T cd07115 79 LDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPL 158 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 6999999999999999888766554444455678899999999
Q ss_pred ----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++++|++++.++++.|+.||++|.|+||||+.+|+.|++.++. ++||+++|+|||||+||++
T Consensus 159 ~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~ 237 (453)
T cd07115 159 SALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFA 237 (453)
T ss_pred HHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECC
Confidence 88999999777788999999999999999999999999999988 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
|||++.|++.|++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++|++
T Consensus 238 dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (453)
T cd07115 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDV 317 (453)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 011130 352 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431 (493)
Q Consensus 352 a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 431 (493)
++++|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+.+
T Consensus 318 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~ 397 (453)
T cd07115 318 GREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRA 397 (453)
T ss_pred HHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHH
Confidence 99999999999976544689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 432 ~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+++++++++|+|+||+++.+.+.+||||+|+||+|+++|.+++++|++.|++++.+
T Consensus 398 ~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~~ 453 (453)
T cd07115 398 HRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVNL 453 (453)
T ss_pred HHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEeC
Confidence 99999999999999998778889999999999999999999999999999998753
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-80 Score=646.85 Aligned_cols=397 Identities=46% Similarity=0.789 Sum_probs=375.0
Q ss_pred ecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhc
Q 011130 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (493)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 165 (493)
+||+||++|++++.++.+|++++|+.|++||+.+.|+++|.++|.++|++++++|++|+++|++++++|+|||+.+++.
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARG- 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence 5999999999999999999999999999999855699999999999999999999999999999999999999999975
Q ss_pred cHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE-------------------------------------
Q 011130 166 EVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA------------------------------------- 207 (493)
Q Consensus 166 Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv------------------------------------- 207 (493)
|+..+++.++|++.+.+++.+...+. ..+...++.++|+|||
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~ 160 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG 160 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 99999999999999877776544332 2334567899999999
Q ss_pred ----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++|+|++++.++++.|+.|+++|+|.||||+++|+.|++.+++ +++++++|+|||||+||++
T Consensus 161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~ 239 (454)
T cd07118 161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFA 239 (454)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECC
Confidence 89999998777789999999999999999999999999999988 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
|||++.|++.|++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++|++
T Consensus 240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 319 (454)
T cd07118 240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA 319 (454)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 011130 352 GVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430 (493)
Q Consensus 352 a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 430 (493)
++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~ 399 (454)
T cd07118 320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDT 399 (454)
T ss_pred HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHH
Confidence 9999999999997654 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 431 ~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
++++++++++|.|+||++....+.+||||+|+||+|+++|++++++||+.|+++
T Consensus 400 ~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 400 ALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999998777788999999999999999999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-80 Score=649.18 Aligned_cols=396 Identities=39% Similarity=0.631 Sum_probs=373.4
Q ss_pred eeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 011130 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (493)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a 162 (493)
++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS 78 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 36889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHhhHHhcCccCCCCC-----CceeEEEeeeeeeE------------------------------
Q 011130 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADG-----PYHVQTLHEPIGVA------------------------------ 207 (493)
Q Consensus 163 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~PlGVv------------------------------ 207 (493)
+. |+..+++.+++++++++.+.+...+.+. +...++.++|+|||
T Consensus 79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K 157 (456)
T cd07145 79 RV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157 (456)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 86 9999999999999887766655433221 34567889999999
Q ss_pred -----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCC
Q 011130 208 -----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264 (493)
Q Consensus 208 -----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~ 264 (493)
|++|+|++++.++++.|+.||++++|.||||+.+|+.|++.+++ +++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~ 236 (456)
T cd07145 158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGS 236 (456)
T ss_pred CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCC
Confidence 89999999777889999999999999999999999999999998 899999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHH
Q 011130 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 344 (493)
Q Consensus 265 ~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 344 (493)
||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.++++
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEe
Q 011130 345 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424 (493)
Q Consensus 345 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 424 (493)
+.++|++++++|+++++||... .|+|++|||+.+++++|+++++|+||||++|++|+|+||+|+++|+++|||+++||
T Consensus 317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 394 (456)
T cd07145 317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF 394 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999753 38999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 425 THNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 425 t~d~~~~~~~~~~l~~g~V~VN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
|+|.+.+.++++++++|+||||+.+... +.+||||+|+||+|+++|++++++|++.|+|+
T Consensus 395 t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 395 TNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence 9999999999999999999999876543 57999999999999999999999999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-81 Score=659.56 Aligned_cols=405 Identities=48% Similarity=0.757 Sum_probs=382.9
Q ss_pred eeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 011130 74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW 153 (493)
Q Consensus 74 ~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~ 153 (493)
|+.+.+ ++++++||.||++|++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 77 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL 77 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence 787655 7799999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE--------------------------
Q 011130 154 DNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA-------------------------- 207 (493)
Q Consensus 154 e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv-------------------------- 207 (493)
|+|||+.+++. |+..+++.++|++++++++.+...+.+.+...++.++|+|||
T Consensus 78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 156 (462)
T PF00171_consen 78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT 156 (462)
T ss_dssp HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence 99999999997 999999999999999999877665555677889999999999
Q ss_pred ---------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEe
Q 011130 208 ---------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 260 (493)
Q Consensus 208 ---------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~le 260 (493)
|++|+|++.+.+++..|+.||++++|.||||+++|+.|.+.+++ +++|+++|
T Consensus 157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~le 235 (462)
T PF00171_consen 157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLE 235 (462)
T ss_dssp EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEE
T ss_pred ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-cccccccc
Confidence 89999999888999999999999999999999999999999887 89999999
Q ss_pred cCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHH
Q 011130 261 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 340 (493)
Q Consensus 261 lgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~ 340 (493)
+|||||+||++|||+|.|++.+++++|+++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEeCC---cccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCC
Q 011130 341 QFEKILKYIRSGVDGGAKLETGG---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 417 (493)
Q Consensus 341 ~~~~~~~~i~~a~~~ga~v~~gg---~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 417 (493)
+++++.++|++++.+|+++++|| ......|+|++|||+.++.++|+++++|+||||++|++|+|++|+|+++|+++|
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 395 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEY 395 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSE
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCC
Confidence 99999999999999999999999 334568999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCC-CCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 418 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 418 gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~-~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
||+++|||+|.+.++++++++++|+|+||+++..++. +||||+|+||+|+++|.+++++|++.|+|
T Consensus 396 gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 396 GLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp ESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred CceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 9999999999999999999999999999998776655 59999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-80 Score=647.80 Aligned_cols=397 Identities=45% Similarity=0.760 Sum_probs=375.7
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..+++.
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV 78 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 579999999999999999999999999999999 999999999999999999999999999999999999999999875
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------- 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------- 207 (493)
|+..+++.++|++++.+++.+...+...+...++.++|+|||
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~ 157 (457)
T cd07090 79 -DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence 999999999999998888766544433455678899999998
Q ss_pred ----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++|+|++.+ ++++.|+.|+++++|.||||+.+|+.|++.+++ ++||+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECC
Confidence 8999999854 588999999999999999999999999999988 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.++|++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEeCCcccC-----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecC
Q 011130 352 GVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426 (493)
Q Consensus 352 a~~~ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 426 (493)
++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~ 395 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR 395 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcC
Confidence 9999999999997532 35899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 427 d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|.+.++++++++++|+||||+.+...+.+||||+|+||+|+++|.+++++||+.|++++.
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 396 DLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 999999999999999999999877778899999999999999999999999999999764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-79 Score=647.85 Aligned_cols=413 Identities=29% Similarity=0.445 Sum_probs=378.8
Q ss_pred ceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~el 147 (493)
+||||+|+.+ ++++++++||.||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL 77 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 5899999865 468899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE--------------------
Q 011130 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA-------------------- 207 (493)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv-------------------- 207 (493)
++++++|+|||..++.. |+..+++.+++++....+..+...+...+...++.++|+|||
T Consensus 78 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 78 ARVIARETGKPLWETRT-EVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999885 999999999998877766655433222234567889999999
Q ss_pred ---------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCC
Q 011130 208 ---------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254 (493)
Q Consensus 208 ---------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~ 254 (493)
|++|+|++ +.+.++.|+.||++|+|+||||+++|+.|++.++....
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 89999998 56788999999999999999999999999998776346
Q ss_pred CceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhH-HHHHHHHHHHHhhcccCCC-CCCCCc
Q 011130 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDP-FKGGIQ 332 (493)
Q Consensus 255 ~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~vg~p-~~~~~~ 332 (493)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++ |+|+++|+++++++++|+| .+++++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 88999999999999999999999999999999999999999999999999985 9999999999999999997 578889
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHH
Q 011130 333 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 412 (493)
Q Consensus 333 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 412 (493)
+||+++..+++++.++|++++++|+++++||...+..|+|++|||+ +++++|.++++|+||||++|++|+|++|||+++
T Consensus 316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~ 394 (484)
T TIGR03240 316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIA 394 (484)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999988654456899999999 688999999999999999999999999999999
Q ss_pred HcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 413 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 413 n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
|+++|||+++|||+|.+.++++++++++|+||||+... ..+.+||||+|+||+|+++|..+++ |++.|++++.+
T Consensus 395 n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 395 NNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 99999999999999999999999999999999998654 3467899999999999999966655 99999999985
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-80 Score=648.60 Aligned_cols=407 Identities=26% Similarity=0.312 Sum_probs=365.7
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHH-ccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
++||||+|+.+ ++.+++++||+||+++++++.++ +|+++||++|++| |+ .|+++|..+|.++|++++++|+++++
T Consensus 2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~ 77 (513)
T cd07128 2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE 77 (513)
T ss_pred ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999975 36789999999999999999876 8999999999997 68 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcC--------ccCCCCC-C-ceeEEEeee-eeeE-------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--------LTAPADG-P-YHVQTLHEP-IGVA------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-lGVv------- 207 (493)
+|+++ ++|+|||+.+++. |+..+++.++||++++++... ...+... . ...++.++| +|||
T Consensus 78 ~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 155 (513)
T cd07128 78 DLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN 155 (513)
T ss_pred HHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence 99996 8999999999985 999999999999998877542 2222211 1 235677999 5998
Q ss_pred -----------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcH
Q 011130 208 -----------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 240 (493)
Q Consensus 208 -----------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~ 240 (493)
|++|+|++.+.++++.| +.+|+|+||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 68999998644444433 5789999999999
Q ss_pred HHHHHHHHH--hhcCCCceeEecCCCCceEEccCCC-----HHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHH
Q 011130 241 TGKIVLQLA--AKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313 (493)
Q Consensus 241 ~g~~v~~~a--~~~~~~pv~lelgG~~p~iV~~daD-----l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~ 313 (493)
+|+.|++.+ ++ +++|+++|||||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++
T Consensus 233 ~G~~i~~~a~~a~-~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~ 311 (513)
T cd07128 233 TAAKLRAHPNIVA-RSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEA 311 (513)
T ss_pred HHHHHHHHhhhhc-cCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHH
Confidence 999999985 35 7899999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc-------CCCCceeeceEEecCCC--C
Q 011130 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKD--D 384 (493)
Q Consensus 314 l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-------~~~g~~~~Ptvl~~~~~--~ 384 (493)
|+++++++++|||.++++++||++++.+++++.++|+++++. +++++||... ...|+|++|||+.++++ +
T Consensus 312 l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 390 (513)
T cd07128 312 LKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAA 390 (513)
T ss_pred HHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCccc
Confidence 999999999999999999999999999999999999999988 9999999652 13589999999998887 4
Q ss_pred ccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcc--eeEEEECCcCC---------CCC
Q 011130 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV---------FDA 453 (493)
Q Consensus 385 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~V~VN~~~~---------~~~ 453 (493)
|.+++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+.+++++++++ +|+||||+.++ ..+
T Consensus 391 ~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~ 470 (513)
T cd07128 391 TAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLP 470 (513)
T ss_pred chHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCC
Confidence 8999999999999999999999999999999999999999999999999999997 99999998642 246
Q ss_pred CCCccCCCCCCCCCc-chHHHHHhhhhceEEE
Q 011130 454 AIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVV 484 (493)
Q Consensus 454 ~~pfGG~~~SG~G~~-~g~~~l~~~~~~k~v~ 484 (493)
.+||||+|.||+|++ +|.+++++|++.|+|.
T Consensus 471 ~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 471 QLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 789999999999999 4799999999999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-80 Score=646.34 Aligned_cols=396 Identities=44% Similarity=0.762 Sum_probs=373.9
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999875
Q ss_pred ccHHHHHHHHHHHHHhhHHhcC---ccCCCC-CCceeEEEeeeeeeE---------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQG---LTAPAD-GPYHVQTLHEPIGVA--------------------------------- 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~---~~~~~~-~~~~~~~~~~PlGVv--------------------------------- 207 (493)
|+..+++.++|++++++++.. ...+.. .+...++.++|+|||
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 157 (456)
T cd07110 79 -DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 999999999999998887642 222221 244578899999999
Q ss_pred --------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCce
Q 011130 208 --------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 267 (493)
Q Consensus 208 --------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~ 267 (493)
|++|+|++++.+.++.|+.||++++|+||||+.+|+.|++.+++ +++|+++|+|||||+
T Consensus 158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~ 236 (456)
T cd07110 158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236 (456)
T ss_pred cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCee
Confidence 89999999777789999999999999999999999999999988 899999999999999
Q ss_pred EEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHH
Q 011130 268 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347 (493)
Q Consensus 268 iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~ 347 (493)
||++|+|++.|++.|++++|+++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEec
Q 011130 348 YIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425 (493)
Q Consensus 348 ~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 425 (493)
+|++++.+|+++++||.... +.|+|+.|||+.+++++|.++++|+||||++|++|+|.||||+++|+++|||+++|||
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 396 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVIS 396 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999997643 4689999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 426 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 426 ~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|++++++|++.|+++
T Consensus 397 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 397 RDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999997767788999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-79 Score=652.23 Aligned_cols=415 Identities=34% Similarity=0.505 Sum_probs=384.7
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
...++|.|.|. .++++++++||+||++|++++.++.+|++++|++|++|++ .|+++|..+|.++|++++++|+++.
T Consensus 18 ~~~~~~~~~~~--~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~ 93 (524)
T PRK09407 18 RLRRLTARVDG--AAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLENR 93 (524)
T ss_pred HHHHHHhhcCC--CCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhH
Confidence 45678888885 4788999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC-C--CCCceeEEEeeeeeeE--------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-A--DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~PlGVv-------------- 207 (493)
++|++++++|+|||..++.. |+..++..++|++..+++....... . ......+..++|+|||
T Consensus 94 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~ 172 (524)
T PRK09407 94 EELLDLVQLETGKARRHAFE-EVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAV 172 (524)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHH
Confidence 99999999999999999875 9999999999999888776543221 1 1124678899999999
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++++.++++.|+.| +|.|+||||+.+|+.|++.
T Consensus 173 ~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~ 250 (524)
T PRK09407 173 SDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQ 250 (524)
T ss_pred HHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHH
Confidence 99999999877888999986 7899999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
+++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.+
T Consensus 251 aa~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 329 (524)
T PRK09407 251 AGR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYD 329 (524)
T ss_pred HHh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 988 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
+++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|+||
T Consensus 330 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~de 409 (524)
T PRK09407 330 YSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDE 409 (524)
T ss_pred cCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHH
Confidence 999999999999999999999999999999999997433 2579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC---CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~---~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
||+++|+++|||+++|||+|.+++.++++++++|.||||+... .++.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 410 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 489 (524)
T PRK09407 410 AVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIA 489 (524)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEE
Confidence 9999999999999999999999999999999999999998643 3567899999999999999999999999999998
Q ss_pred EeC
Q 011130 485 TAL 487 (493)
Q Consensus 485 ~~~ 487 (493)
+..
T Consensus 490 ~~~ 492 (524)
T PRK09407 490 TQR 492 (524)
T ss_pred Ecc
Confidence 764
|
|
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-80 Score=645.41 Aligned_cols=397 Identities=40% Similarity=0.619 Sum_probs=374.6
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~-~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~ 163 (493)
++||+||++|++++.++.+|+++++++|++||+ .|+ ++|..+|.++|++++++|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~ 78 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR 78 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 479999999999999999999999999999999 899 99999999999999999999999999999999999997765
Q ss_pred hccHHHHHHHHHHHHHhhHHhcCccC-CCC----CCceeEEEeeeeeeE-------------------------------
Q 011130 164 QTEVPMTTRLFRYYAGWADKIQGLTA-PAD----GPYHVQTLHEPIGVA------------------------------- 207 (493)
Q Consensus 164 ~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~----~~~~~~~~~~PlGVv------------------------------- 207 (493)
..|+..+++.++|+++.+++..+... +.. .+...++.++|+|||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 158 (459)
T cd07089 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP 158 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 56999999999999998887655432 221 245678999999999
Q ss_pred ----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCC
Q 011130 208 ----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 265 (493)
Q Consensus 208 ----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~ 265 (493)
|++|+|++.+.+++..|+.||+++.|.||||+.+|+.|++.+++ ++||+++|+||||
T Consensus 159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n 237 (459)
T cd07089 159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKS 237 (459)
T ss_pred CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCC
Confidence 89999999777788999999999999999999999999999988 8999999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHH
Q 011130 266 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 345 (493)
Q Consensus 266 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~ 345 (493)
|+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEE
Q 011130 346 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 423 (493)
Q Consensus 346 ~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 423 (493)
.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v 397 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGV 397 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEE
Confidence 9999999999999999997543 36899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 424 FTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 424 ~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
||+|.+.++++++++++|+|+||+....++.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 398 ~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 398 WSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred EcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 9999999999999999999999998777788999999999999999999999999999986
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-79 Score=642.83 Aligned_cols=395 Identities=44% Similarity=0.717 Sum_probs=372.6
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~-~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~ 163 (493)
++||+||++|++++.++.+|+++++++|++||+ .|. ++|.++|.++|++++++|+++.++|++++++|+|||..+++
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 78 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR 78 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence 479999999999999999999999999999998 776 99999999999999999999999999999999999999988
Q ss_pred hccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------------------------
Q 011130 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------ 207 (493)
Q Consensus 164 ~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------ 207 (493)
. |+..+++.++|++++.+++.+...+...+...+..++|+|||
T Consensus 79 ~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (454)
T cd07109 79 A-DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP 157 (454)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 5 999999999999998888776555443455678999999999
Q ss_pred -----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 -----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 -----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++|+|++.+.+.++.|+.||++|.|+||||+.+|+.|++.+++ ++||+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~ 236 (454)
T cd07109 158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEEC
Confidence 99999998777888999999999999999999999999999888 899999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
+|||++.|++.|++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.++|+
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~ 315 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 689999999999999999999
Q ss_pred HHHhCCCEEEeCCcccC---CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCC
Q 011130 351 SGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427 (493)
Q Consensus 351 ~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 427 (493)
+++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d 395 (454)
T cd07109 316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRD 395 (454)
T ss_pred HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCC
Confidence 99999999999987533 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceeEEEECCcC-CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 428 LDTANTLMRALRVGSVWINCFD-VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 428 ~~~~~~~~~~l~~g~V~VN~~~-~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
.+.+.++++++++|+|+||++. ..++.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 396 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 396 GDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999976 45678999999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-79 Score=643.88 Aligned_cols=396 Identities=40% Similarity=0.648 Sum_probs=374.8
Q ss_pred eeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 011130 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (493)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a 162 (493)
++++||+||++|++++.++.+|++++|++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA 78 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------------------------
Q 011130 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------------------------- 207 (493)
Q Consensus 163 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------------------------- 207 (493)
.. |+..+++.+++++.++++..+...+.. .+...+..++|+|||
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 157 (451)
T cd07150 79 WF-ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE 157 (451)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 75 999999999999999888766554433 344567899999998
Q ss_pred -------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceE
Q 011130 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268 (493)
Q Consensus 208 -------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~i 268 (493)
|++|+|++.+.++++.|+.|++||+|.||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~i 236 (451)
T cd07150 158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236 (451)
T ss_pred CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeE
Confidence 89999998777889999999999999999999999999999988 8999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 011130 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 348 (493)
Q Consensus 269 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~ 348 (493)
|++|||+|.|++.|++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 316 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ 316 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 349 i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
|++++.+|+++++||.. .|+|++|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 99999999999999864 489999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 429 DTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
+.++++++++++|+|+||++.... +.+||||+|+||+|+++|.+++++||+.|+|++
T Consensus 394 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 394 QRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred HHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 999999999999999999976544 679999999999999999999999999999863
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-79 Score=646.40 Aligned_cols=413 Identities=29% Similarity=0.425 Sum_probs=381.4
Q ss_pred cceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
-.||+|+|.. ++++++++||+| |++|++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 34 ~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 109 (518)
T cd07125 34 IPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANRG 109 (518)
T ss_pred CceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4589999983 678999999999 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCcc-CCCCCCceeEEEeeeeeeE-----------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
+|++++++|+|||+.++.. |+..+++.++++++++++..+.. .+...+...++.++|+|||
T Consensus 110 ~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i 188 (518)
T cd07125 110 ELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQI 188 (518)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHH
Confidence 9999999999999999985 99999999999999888765432 2322345568899999998
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++.+.+++..|+.|+++|+|+||||+.+|+.|++.+++
T Consensus 189 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~ 268 (518)
T cd07125 189 AAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAE 268 (518)
T ss_pred HHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999998766688999999999999999999999999998875
Q ss_pred c--CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 252 S--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 252 ~--~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
. .++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++
T Consensus 269 ~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 348 (518)
T cd07125 269 RDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDL 348 (518)
T ss_pred ccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCC
Confidence 2 37899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC--CHHH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDE 407 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~e 407 (493)
++++||++++.+++++.++|++++. ++++++||......|+|++|||+.++ +|.++++|+||||++|++|+ |+||
T Consensus 349 ~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~de 425 (518)
T cd07125 349 STDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDE 425 (518)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHH
Confidence 9999999999999999999999987 47899998753336899999999888 89999999999999999999 9999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEE
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~ 484 (493)
||+++|+++|||+++|||+|.+.++++++++++|+||||+++.. .+.+||||+|+||+| +++|.+++++|++.|+++
T Consensus 426 Ai~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~ 505 (518)
T cd07125 426 AIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVS 505 (518)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999987653 367899999999999 578899999999999998
Q ss_pred EeC
Q 011130 485 TAL 487 (493)
Q Consensus 485 ~~~ 487 (493)
+.+
T Consensus 506 ~~~ 508 (518)
T cd07125 506 LNT 508 (518)
T ss_pred EEc
Confidence 875
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-79 Score=641.45 Aligned_cols=411 Identities=36% Similarity=0.514 Sum_probs=385.1
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCC-CHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM-TAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~-~~~~R~~iL~~la~~l~~~~ 144 (493)
+++||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++||+ .|+++ +..+|.++|++++++|++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~ 78 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK 78 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999764 68899999999999999999999999999999999999 99988 99999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-----CCceeEEEeeeeeeE------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVA------------ 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~PlGVv------------ 207 (493)
++|++++++|+|||..++.. |+..+++.++++++..+++.+...+.. .+...+..++|+|||
T Consensus 79 ~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 157 (473)
T cd07082 79 EEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL 157 (473)
T ss_pred HHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence 99999999999999999875 999999999999998887765543322 234567899999998
Q ss_pred -----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHH
Q 011130 208 -----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246 (493)
Q Consensus 208 -----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 246 (493)
|+++++++.+.++++.|..|+++|.|+||||+++|+.|.
T Consensus 158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 899999997777889999999999999999999999999
Q ss_pred HHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCC
Q 011130 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326 (493)
Q Consensus 247 ~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p 326 (493)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~ 314 (473)
T cd07082 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314 (473)
T ss_pred HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8875 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 327 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
.++++++||+++..+++++.+++++++.+|+++++||... .|+|+.|||+.+++++|+++++|+||||++|++|+|++
T Consensus 315 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 392 (473)
T cd07082 315 WDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIE 392 (473)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHH
Confidence 9999999999999999999999999999999999999753 38999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
|+|+++|+++|||+++|||+|.+.+.++++++++|+||||+++... +.+||||+|+||+|+++|.+++++|++.|++++
T Consensus 393 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 393 EAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 9999999999999999999999999999999999999999976544 568999999999999999999999999999875
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-79 Score=639.64 Aligned_cols=398 Identities=46% Similarity=0.793 Sum_probs=375.5
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||++|++++.++.+++++++++|++|++++.|+++|.++|.++|++++++|.+++++|++++++|+|||..++..
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 47999999999999999999999999999999744699999999999999999999999999999999999999999885
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------------------------------ 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------------------------------ 207 (493)
|+..+++.+++++.+.+++.+...+.. .+...++.++|+|||
T Consensus 81 -ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p 159 (457)
T cd07114 81 -QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP 159 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence 999999999999988877765544433 345678899999999
Q ss_pred -----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 -----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 -----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++|+|++.+.+.++.|+.|+++++|+||||+.+|+.|++.+++ ++||+++|+|||||+||+
T Consensus 160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 238 (457)
T cd07114 160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF 238 (457)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEEC
Confidence 89999999777788999999999999999999999999999988 899999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
+|||++.|++.|++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++|+
T Consensus 239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (457)
T cd07114 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA 318 (457)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecC
Q 011130 351 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426 (493)
Q Consensus 351 ~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 426 (493)
+++++|+++++||.... ..|+|++|||+.++.+++.++++|+||||++|++|+|.||||+++|+++|||+++|||+
T Consensus 319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~ 398 (457)
T cd07114 319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTR 398 (457)
T ss_pred HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECC
Confidence 99999999999997543 35899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 427 d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
|.+.++++++++++|+|+||+.+...+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 399 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 399 DLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999998777888999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-79 Score=636.45 Aligned_cols=379 Identities=27% Similarity=0.385 Sum_probs=350.1
Q ss_pred CCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 011130 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (493)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 179 (493)
....|+++++++|++||+ .|+++|..+|.++|++++++|++|.++|++++++|+|||..++...|+..+++.++|+++
T Consensus 7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999 999999999999999999999999999999999999999988876699999999999999
Q ss_pred hhHHhcC----ccCCCCCCceeEEEeeeeeeE------------------------------------------------
Q 011130 180 WADKIQG----LTAPADGPYHVQTLHEPIGVA------------------------------------------------ 207 (493)
Q Consensus 180 ~~~~~~~----~~~~~~~~~~~~~~~~PlGVv------------------------------------------------ 207 (493)
.+++..+ ...+...+...++.++|+|||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~ 164 (484)
T PLN02174 85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ 164 (484)
T ss_pred HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 8876655 222222234568899999999
Q ss_pred ----eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHH
Q 011130 208 ----GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 283 (493)
Q Consensus 208 ----gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~ 283 (493)
|++|+|+|. .+.+..|+. +++|+|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||++.|++.++
T Consensus 165 ~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~ 241 (484)
T PLN02174 165 YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRII 241 (484)
T ss_pred hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHH
Confidence 999999984 445666775 899999999999999999999998 9999999999999999999999999999999
Q ss_pred HHHH-hhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeC
Q 011130 284 YALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 362 (493)
Q Consensus 284 ~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~g 362 (493)
+++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++|
T Consensus 242 ~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~G 319 (484)
T PLN02174 242 AGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYG 319 (484)
T ss_pred HHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEEC
Confidence 9999 69999999999999999999999999999999999999987 78999999999999999999998 789999999
Q ss_pred CcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeE
Q 011130 363 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 442 (493)
Q Consensus 363 g~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~ 442 (493)
|... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.
T Consensus 320 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~ 398 (484)
T PLN02174 320 GEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGG 398 (484)
T ss_pred CCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcce
Confidence 9753 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCcCCCC--CCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 443 VWINCFDVFD--AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 443 V~VN~~~~~~--~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|+||++.... +.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 399 v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 399 IVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred EEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 9999875443 6789999999999999999999999999999876
|
|
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-79 Score=638.23 Aligned_cols=393 Identities=31% Similarity=0.441 Sum_probs=367.2
Q ss_pred eeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCC-CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 011130 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (493)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~-w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a 162 (493)
+++||+||+++++++.++.+|++++|++|++||+ . |+.+|.++|.++|++++++|+++.++|++++++|+|||..++
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 79 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA 79 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5789999999999999999999999999999998 6 567999999999999999999999999999999999999998
Q ss_pred hhccHHHHHHHHHHHHHhhHHhcCccCCCC-----CCceeEEEeeeeeeE------------------------------
Q 011130 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVA------------------------------ 207 (493)
Q Consensus 163 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~PlGVv------------------------------ 207 (493)
.. |+..+++.+++++..++++.+...+.. .+...++.++|+|||
T Consensus 80 ~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK 158 (455)
T cd07148 80 KV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158 (455)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence 85 999999999999998887765433321 234568899999998
Q ss_pred -----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCC
Q 011130 208 -----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264 (493)
Q Consensus 208 -----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~ 264 (493)
|++|+|++. .+.++.|+.||+||+|+||||+++|+.|++.++. + +|+++|+|||
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~-~~~~lElGG~ 235 (455)
T cd07148 159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-G-TRCALEHGGA 235 (455)
T ss_pred CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-C-CcEEEecCCC
Confidence 999999984 4678999999999999999999999999998875 4 8999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHH
Q 011130 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 344 (493)
Q Consensus 265 ~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 344 (493)
||+||++|||+|.|++.|++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.++++
T Consensus 236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 315 (455)
T cd07148 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDR 315 (455)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEe
Q 011130 345 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424 (493)
Q Consensus 345 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 424 (493)
+.++|++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 316 ~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~ 393 (455)
T cd07148 316 VEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVF 393 (455)
T ss_pred HHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999754 47899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 425 THNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 425 t~d~~~~~~~~~~l~~g~V~VN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
|+|.+.+.++++++++|+||||+++.+. +.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 394 t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 394 TKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 9999999999999999999999876544 46899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-79 Score=639.76 Aligned_cols=392 Identities=37% Similarity=0.605 Sum_probs=371.2
Q ss_pred eeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhh
Q 011130 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (493)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~ 163 (493)
+++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|.+++++|+++.++|++++++|+|||..+++
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 79 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR 79 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Confidence 5789999999999999999999999999999999 99999999999999999999999999999999999999999998
Q ss_pred hccHHHHHHHHHHHHHhhHHhcCccCCCC-----CCceeEEEeeeeeeE-------------------------------
Q 011130 164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVA------------------------------- 207 (493)
Q Consensus 164 ~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~PlGVv------------------------------- 207 (493)
. |+..+++.+++++..++++.+...+.. .+...+..++|+|||
T Consensus 80 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp 158 (453)
T cd07094 80 V-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP 158 (453)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5 999999999999998888766544433 245667889999998
Q ss_pred ----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCC
Q 011130 208 ----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 265 (493)
Q Consensus 208 ----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~ 265 (493)
|++++|++.+.++++.|+.||++|.|+||||+++|+.|++.+ +++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~ 235 (453)
T cd07094 159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNA 235 (453)
T ss_pred CCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCC
Confidence 899999997778899999999999999999999999999977 4689999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHH
Q 011130 266 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 345 (493)
Q Consensus 266 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~ 345 (493)
|+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++.+||++++.+++++
T Consensus 236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 315 (453)
T cd07094 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERV 315 (453)
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEec
Q 011130 346 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425 (493)
Q Consensus 346 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 425 (493)
.++|++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 316 ~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 392 (453)
T cd07094 316 ERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFT 392 (453)
T ss_pred HHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEEC
Confidence 99999999999999999864 588999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 426 HNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 426 ~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+|.+++.++++++++|+||||++... .+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 393 ~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 393 RDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 99999999999999999999997654 478999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-79 Score=638.55 Aligned_cols=394 Identities=35% Similarity=0.524 Sum_probs=367.2
Q ss_pred ecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhc
Q 011130 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (493)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 165 (493)
.||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++..
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~- 77 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFE- 77 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH-
Confidence 38999999999999999999999999999999 999999999999999999999999999999999999999999874
Q ss_pred cHHHHHHHHHHHHHhhHHhcCccC-CC--CCCceeEEEeeeeeeE-----------------------------------
Q 011130 166 EVPMTTRLFRYYAGWADKIQGLTA-PA--DGPYHVQTLHEPIGVA----------------------------------- 207 (493)
Q Consensus 166 Ev~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~PlGVv----------------------------------- 207 (493)
|+..++..++|++..+++...... +. ......+..++|+|||
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~ 157 (454)
T cd07101 78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 999999999999988876654322 11 1234668899999999
Q ss_pred ------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEE
Q 011130 208 ------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 269 (493)
Q Consensus 208 ------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV 269 (493)
|++|+|++.+.+.++.|+.| ++.|+||||+.+|+.|++.+++ +++|+++|||||||+||
T Consensus 158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV 234 (454)
T cd07101 158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIV 234 (454)
T ss_pred hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEE
Confidence 89999999888888999987 5789999999999999999988 89999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 011130 270 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 349 (493)
Q Consensus 270 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i 349 (493)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 350 RSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 350 ~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (454)
T cd07101 315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG 394 (454)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999986432 3579999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCC---CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 429 DTANTLMRALRVGSVWINCFDV---FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~---~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
+.++++++++++|+||||++.. .++.+||||+|.||+|+++|.+++++|++.|++++
T Consensus 395 ~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 395 ARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 9999999999999999998643 45678999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=638.30 Aligned_cols=396 Identities=44% Similarity=0.709 Sum_probs=372.2
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh-hhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF-EQSA 163 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~-~~a~ 163 (493)
++||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||. .+++
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~ 78 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR 78 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence 479999999999999999999999999999999 9999999999999999999999999999999999999997 6777
Q ss_pred hccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------------------------
Q 011130 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------ 207 (493)
Q Consensus 164 ~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------ 207 (493)
.|+..+++.+++++.+...+.+...+...+...+..++|+|||
T Consensus 79 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 157 (457)
T cd07108 79 -PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 4999999999999988877766555443445567889999999
Q ss_pred ----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++|+|++.+.++++.|+.||++|+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~~l~~~~~~~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~~ 236 (457)
T cd07108 158 LAVLLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFP 236 (457)
T ss_pred HHHHHHHHHHHHhCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEECC
Confidence 99999998777788999999999999999999999999999988 8999999999999999999
Q ss_pred CCCHHHHHHHHHHH-HHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYA-LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 272 daDl~~aa~~i~~~-~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
|||++.|++.++++ .|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++|+
T Consensus 237 dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 316 (457)
T cd07108 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYID 316 (457)
T ss_pred CCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 99999999999999 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh-CCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEec
Q 011130 351 SGVD-GGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425 (493)
Q Consensus 351 ~a~~-~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 425 (493)
++++ +|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 317 ~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft 396 (457)
T cd07108 317 LGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWT 396 (457)
T ss_pred HHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEc
Confidence 9998 9999999997542 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH-HHhhhhceEEE
Q 011130 426 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAVV 484 (493)
Q Consensus 426 ~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~-l~~~~~~k~v~ 484 (493)
+|.+.++++++++++|.|+||++....+.+||||+|+||+|+++|.++ +++||+.|+++
T Consensus 397 ~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 397 RDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred CCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 999999999999999999999987667889999999999999999866 79999999885
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-78 Score=655.82 Aligned_cols=409 Identities=24% Similarity=0.317 Sum_probs=367.4
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHH-ccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
++||||+|+.+. +++++++||+||+++++++.++ .|+++||++|++| |+ .|+++|..+|.++|++++++|+++.+
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 77 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE 77 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999753 5789999999999999999999 5999999999996 88 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhc--------CccCCCCC--CceeEEEeeee-eeE-------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPADG--PYHVQTLHEPI-GVA------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~--~~~~~~~~~Pl-GVv------- 207 (493)
+|++ +++|+|||+.+++. |+..+++.++||+.++++.. +...+... ....++.++|+ |||
T Consensus 78 ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 78 ALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred HHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence 9999 59999999999885 99999999999999887632 33333221 23467899997 999
Q ss_pred -----------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcH
Q 011130 208 -----------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 240 (493)
Q Consensus 208 -----------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~ 240 (493)
|++|+|++.. +..+..++.+++|+||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence 6899999842 33333347789999999999
Q ss_pred HHHHHHHHH--hhcCCCceeEecCCCCceEEccCCC-----HHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHH
Q 011130 241 TGKIVLQLA--AKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313 (493)
Q Consensus 241 ~g~~v~~~a--~~~~~~pv~lelgG~~p~iV~~daD-----l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~ 313 (493)
+|+.|++.+ ++ +++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 233 ~G~~i~~~aaaa~-~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~ 311 (663)
T TIGR02278 233 TADRLRAHPNVLE-RGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKA 311 (663)
T ss_pred HHHHHHHhHhHHh-cCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHH
Confidence 999999874 35 8899999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCc-ccccccc
Q 011130 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM-LIAKDEI 392 (493)
Q Consensus 314 l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~-~i~~~E~ 392 (493)
|++++.++++|+|.++++++||++++.+++++.++|++++++|+++++||... ..|+|++|||+.++.++| .+++||+
T Consensus 312 l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~ 390 (663)
T TIGR02278 312 LQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEA 390 (663)
T ss_pred HHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhccc
Confidence 99999999999999999999999999999999999999999999999999753 358999999999988876 7999999
Q ss_pred ccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc--ceeEEEE-CCc-------CC-CCCCCCccCCC
Q 011130 393 FGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWI-NCF-------DV-FDAAIPFGGYK 461 (493)
Q Consensus 393 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~V~V-N~~-------~~-~~~~~pfGG~~ 461 (493)
||||++|++|+|.+|||+++|+++|||+++|||+|.+.+++++++| ++|+||| |.. .. ..+.+||||+|
T Consensus 391 FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k 470 (663)
T TIGR02278 391 FGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPG 470 (663)
T ss_pred cCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999 8999999 642 11 23678999999
Q ss_pred CCCCCCc-chHHHHHhhhhceEEEEe
Q 011130 462 QSGQGRE-KGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 462 ~SG~G~~-~g~~~l~~~~~~k~v~~~ 486 (493)
+||+|++ +|.+++++|++.|+|..-
T Consensus 471 ~SG~G~~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 471 RAGGGEELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred cCcCCCccchHHHHHHhceeEEEEcC
Confidence 9999999 568999999999998654
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-78 Score=636.46 Aligned_cols=396 Identities=41% Similarity=0.661 Sum_probs=372.7
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|.++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 78 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD 78 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999977655
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA------------------------------------ 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv------------------------------------ 207 (493)
.|+..+++.+++++...+.+.+...+. ..+...++.++|+|||
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 158 (450)
T cd07092 79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 699999999999998877765543221 1233567899999999
Q ss_pred ----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++|+|++.+.+.++.|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 159 ~~~~~l~~~~~~glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~~ 237 (450)
T cd07092 159 LTTLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFD 237 (450)
T ss_pred HHHHHHHHHHHhcCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEECC
Confidence 99999998777788999999999999999999999999999998 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
|||+|.|++.|++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 238 dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~ 317 (450)
T cd07092 238 DADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVER 317 (450)
T ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 011130 352 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431 (493)
Q Consensus 352 a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 431 (493)
+. +|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 318 a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~ 396 (450)
T cd07092 318 AP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRA 396 (450)
T ss_pred HH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 98 99999999986555789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 432 ~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+++++++++|+|+||++....+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 397 ~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 397 MRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 99999999999999998777788999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-78 Score=634.56 Aligned_cols=394 Identities=34% Similarity=0.523 Sum_probs=371.7
Q ss_pred ecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhc
Q 011130 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (493)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 165 (493)
+||+||+++++++.++.+|++++|++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||..++..
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~- 77 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGG- 77 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHH-
Confidence 58999999999999999999999999999999 999999999999999999999999999999999999999999874
Q ss_pred cHHHHHHHHHHHHHhhHHhcCcc-CCCCCCceeEEEeeeeeeE-------------------------------------
Q 011130 166 EVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVA------------------------------------- 207 (493)
Q Consensus 166 Ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~PlGVv------------------------------------- 207 (493)
|+..+++.+++++..+++..+.. .+...+...++.++|+|||
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 157 (452)
T cd07102 78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 99999999999998887664442 2333445567899999999
Q ss_pred ----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++|+|++++ +.+..|+.||+|+.|.||||+++|+.|++.+++ +++|+.+|+|||||+||++
T Consensus 158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~ 235 (452)
T cd07102 158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP 235 (452)
T ss_pred HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcC
Confidence 8999999966 788999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
|||+|.|++.+++++|+++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.++|++
T Consensus 236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~ 315 (452)
T cd07102 236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD 315 (452)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEeCCccc---CCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 352 GVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 352 a~~~ga~v~~gg~~~---~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
++++|+++++||... +..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 395 (452)
T cd07102 316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDI 395 (452)
T ss_pred HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999753 24689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 429 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+.+.++++++++|+||||++...++..||||+|+||+|+++|.+++++|++.|+++
T Consensus 396 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 396 ARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 99999999999999999998767778999999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-78 Score=639.02 Aligned_cols=412 Identities=24% Similarity=0.330 Sum_probs=366.5
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHc-cCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~-~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
..++||||+|+.+ ++.+++++||+||+++++++. +.+|+++||++|++|+ + .|+++|..+|.++|++++++|+++
T Consensus 4 ~~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~ 79 (521)
T PRK11903 4 LLANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQAN 79 (521)
T ss_pred hhhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHH
Confidence 3468999999964 357899999999999999997 8899999999999995 7 899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC---------CCceeEEEeee-eeeE------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---------GPYHVQTLHEP-IGVA------ 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---------~~~~~~~~~~P-lGVv------ 207 (493)
.++|++++++|+|||+.+++. |+..+++.++||+.+++.+.+...... .....++.++| +|||
T Consensus 80 ~~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pw 158 (521)
T PRK11903 80 RDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAF 158 (521)
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCc
Confidence 999999999999999999985 999999999999998877654322111 12234667899 5998
Q ss_pred ------------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCc
Q 011130 208 ------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGST 239 (493)
Q Consensus 208 ------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~ 239 (493)
|++|+|+|.+.++++.| +++|+|+||||+
T Consensus 159 N~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~ 235 (521)
T PRK11903 159 NFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSA 235 (521)
T ss_pred chHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCH
Confidence 78999998665555444 789999999999
Q ss_pred HHHHHHHHHH--hhcCCCceeEecCCCCceEEccCCC-----HHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHH
Q 011130 240 TTGKIVLQLA--AKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312 (493)
Q Consensus 240 ~~g~~v~~~a--~~~~~~pv~lelgG~~p~iV~~daD-----l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~ 312 (493)
++|+.|++.+ +. +++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 236 ~~G~~v~~~aa~~~-~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~ 314 (521)
T PRK11903 236 ETAAVLRSHPAVVQ-RSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAE 314 (521)
T ss_pred HHHHHHHhhhhhhc-cCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHH
Confidence 9999999864 35 7899999999999999999999 59999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc------CCCCceeeceEEecCCC--C
Q 011130 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKD--D 384 (493)
Q Consensus 313 ~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~------~~~g~~~~Ptvl~~~~~--~ 384 (493)
+|+++++++++|+|.++++++||++++.+++++.++|+.. .+|+++++||... ...|+|++|||+.++.+ +
T Consensus 315 ~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~ 393 (521)
T PRK11903 315 ALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAA 393 (521)
T ss_pred HHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCcc
Confidence 9999999999999999999999999999999999999964 5799999999652 13589999999987654 4
Q ss_pred ccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc--ceeEEEECCcCC---------CCC
Q 011130 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV---------FDA 453 (493)
Q Consensus 385 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~V~VN~~~~---------~~~ 453 (493)
+.++++|+||||++|++|+|++|+|+++|+++|||+++|||+|.+.+.++++++ ++|+||||+.+. ..+
T Consensus 394 ~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~ 473 (521)
T PRK11903 394 TAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMP 473 (521)
T ss_pred chHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999 999999997532 346
Q ss_pred CCCccCCCCCCCCCcc-hHHHHHhhhhceEEEEe
Q 011130 454 AIPFGGYKQSGQGREK-GSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 454 ~~pfGG~~~SG~G~~~-g~~~l~~~~~~k~v~~~ 486 (493)
.+||||+|+||+|+++ |.+++++|++.|++..+
T Consensus 474 ~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~~ 507 (521)
T PRK11903 474 QSLHGGPGRAGGGEELGGLRALAFYHRRSAVQAS 507 (521)
T ss_pred CCCCCCCCcCcCCcccccHHHHHHHhccceeeCC
Confidence 7899999999999985 58999999998877543
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-78 Score=637.76 Aligned_cols=398 Identities=30% Similarity=0.440 Sum_probs=368.6
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCC-CeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTG-DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
..|+||||+|+. ++.+++++||.|+ ++|++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|+++
T Consensus 37 ~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~ 112 (500)
T TIGR01238 37 QAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLELH 112 (500)
T ss_pred ecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhH
Confidence 468999999986 5788999999995 89999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE----------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv---------------- 207 (493)
.++|++++++|+|||..++.. |+..+++.++++++..++..+. ..++|+|||
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~~-----------~~~~P~GVV~~I~pwN~P~~~~~~~ 180 (500)
T TIGR01238 113 MPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLGE-----------FSVESRGVFVCISPWNFPLAIFTGQ 180 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCc-----------eeccCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999975 9999999999999887654321 358899998
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||++|+|+||||+.+|+.|++.++
T Consensus 181 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa 260 (500)
T TIGR01238 181 ISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA 260 (500)
T ss_pred HHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh
Confidence 9999999877678999999999999999999999999999998
Q ss_pred hcCC---CceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 251 KSNL---KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 251 ~~~~---~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
+ ++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.
T Consensus 261 ~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~ 339 (500)
T TIGR01238 261 Q-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH 339 (500)
T ss_pred h-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence 7 54 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCc---ccCCCCceeeceEEecCCCCccccccccccceEEEEEeC-
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE---RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK- 403 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~---~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~- 403 (493)
++++++||++++.+++++.++|+++++.|++++.++. .....|+|++|||+.+ ++|.++++|+||||++|++|+
T Consensus 340 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~ 417 (500)
T TIGR01238 340 LLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKA 417 (500)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCC
Confidence 9999999999999999999999999999999875432 1223689999999984 688899999999999999998
Q ss_pred -CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhh
Q 011130 404 -DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQ 479 (493)
Q Consensus 404 -~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~ 479 (493)
++||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.... .+.+||||+|+||+| +++|.+++++|++
T Consensus 418 ~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~ 497 (500)
T TIGR01238 418 RELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQ 497 (500)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHh
Confidence 799999999999999999999999999999999999999999986543 255799999999999 8999999999999
Q ss_pred ce
Q 011130 480 VK 481 (493)
Q Consensus 480 ~k 481 (493)
.|
T Consensus 498 ~k 499 (500)
T TIGR01238 498 VQ 499 (500)
T ss_pred hc
Confidence 87
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-78 Score=633.97 Aligned_cols=393 Identities=35% Similarity=0.545 Sum_probs=367.5
Q ss_pred eeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 011130 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (493)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a 162 (493)
++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 36899999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hhccHHHHHHHHHHHHHhhHHhcCccCCCC-----CCceeEEEeeeeeeE------------------------------
Q 011130 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVA------------------------------ 207 (493)
Q Consensus 163 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~PlGVv------------------------------ 207 (493)
+. |+..++..+++++..+.+..+...+.. .+...++.++|+|||
T Consensus 79 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 79 RG-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 85 999999999999988776654432211 234567889999999
Q ss_pred -----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCC
Q 011130 208 -----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264 (493)
Q Consensus 208 -----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~ 264 (493)
|++|+|++. .+.+..|+.||++|+|+||||+.+|+.|++.++. +|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~ 233 (452)
T cd07147 158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGN 233 (452)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCC
Confidence 999999984 5678899999999999999999999999998764 6999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHH
Q 011130 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 344 (493)
Q Consensus 265 ~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 344 (493)
||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.++++|||.++++++||++++.++++
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 313 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER 313 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEe
Q 011130 345 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424 (493)
Q Consensus 345 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 424 (493)
+.++|++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++||
T Consensus 314 ~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~ 390 (452)
T cd07147 314 VEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVF 390 (452)
T ss_pred HHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 999999999999999999875 48999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 425 THNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 425 t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
|+|.++++++++++++|+||||+.+.. .+.+||||+|+||+|+++|.+++++|++.|+|++
T Consensus 391 t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 391 TRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 999999999999999999999987654 4679999999999999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-78 Score=631.19 Aligned_cols=393 Identities=38% Similarity=0.577 Sum_probs=368.2
Q ss_pred ecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhc
Q 011130 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (493)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 165 (493)
+||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||..++..
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~- 77 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGL- 77 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-
Confidence 58999999999999999999999999999999 999999999999999999999999999999999999999998775
Q ss_pred cHHHHHHHHHHHHHhhHHhcCcc-CCC---CCCceeEEEeeeeeeE----------------------------------
Q 011130 166 EVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVA---------------------------------- 207 (493)
Q Consensus 166 Ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~PlGVv---------------------------------- 207 (493)
|+..+++.++|+++.++++.+.. .+. ..+...+++++|+|||
T Consensus 78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~ 157 (453)
T cd07099 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999999887765432 221 1344678899999998
Q ss_pred -------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceE
Q 011130 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268 (493)
Q Consensus 208 -------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~i 268 (493)
|++|+|++.+ +.++.|+.| .+|+|+||||+++|+.|++.+++ +++|+++|+|||||+|
T Consensus 158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i 234 (453)
T cd07099 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234 (453)
T ss_pred chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence 9999999865 678888887 59999999999999999999988 8999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 011130 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 348 (493)
Q Consensus 269 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~ 348 (493)
|++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~ 314 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH 314 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 349 i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
|++++++|+++++||......|+|++|||+.++.++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+|.
T Consensus 315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (453)
T cd07099 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDL 394 (453)
T ss_pred HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCH
Confidence 99999999999999976534689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 429 DTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+.++++++++++|+||||+... ..+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 395 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 395 ARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 9999999999999999998754 3578999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-77 Score=628.89 Aligned_cols=396 Identities=43% Similarity=0.697 Sum_probs=375.1
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||.||++|++++.++.+|+++++++|++|++ .|+++|.++|.++|+++++.|+++.++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 78 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG 78 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999985
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------------------------------ 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------------------------------ 207 (493)
|+..+++.++|++..+++..+...+.. .+...+..++|+|||
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 157 (451)
T cd07103 79 -EVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP 157 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 999999999999988877666544432 344678899999999
Q ss_pred -----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 -----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 -----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++++|++.+.+.++.|+.|+++|+|+||||+.+|+.|.+.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEC
Confidence 89999998777788899999999999999999999999999998 899999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
+|||++.|++.|++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++.+||++++.+++++.++|+
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~ 316 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE 316 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 011130 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430 (493)
Q Consensus 351 ~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 430 (493)
+++.+|+++++||......|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 396 (451)
T cd07103 317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR 396 (451)
T ss_pred HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 99999999999997654468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 431 ~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
++++++++++|+|+||++....+.+||||+|+||+|+++|++++++|++.|+++
T Consensus 397 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 397 AWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 999999999999999998777788999999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-77 Score=629.14 Aligned_cols=397 Identities=33% Similarity=0.553 Sum_probs=369.2
Q ss_pred ecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhc
Q 011130 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (493)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 165 (493)
+||+||++|++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|.++.++|++++++|+|||+.++...
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 78 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG 78 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 59999999999999999999999999999999 9999999999999999999999999999999999999999998766
Q ss_pred cHHHHHHHHHHHHHhhHHhcCc-cCCCC---CCceeEEEeeeeeeE----------------------------------
Q 011130 166 EVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVA---------------------------------- 207 (493)
Q Consensus 166 Ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~PlGVv---------------------------------- 207 (493)
|+..+++.++|++..+++.... ..+.. .....++.++|+|||
T Consensus 79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 158 (465)
T cd07098 79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ 158 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999998876654322 22211 123457789999998
Q ss_pred -----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCC
Q 011130 208 -----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264 (493)
Q Consensus 208 -----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~ 264 (493)
|++|+|++.+ ++++.|+.||+|+.|.||||+.+|+.|.+.+++ ++||+++|+|||
T Consensus 159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~ 236 (465)
T cd07098 159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK 236 (465)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence 9999999855 788999999999999999999999999999988 899999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHH
Q 011130 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 344 (493)
Q Consensus 265 ~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 344 (493)
||+||++|||++.|++.|++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.++++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcE
Q 011130 345 ILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 420 (493)
Q Consensus 345 ~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 420 (493)
+.++|++++.+|+++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||+
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLs 396 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLG 396 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999986532 25899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 421 AGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 421 a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
++|||+|.+.+.++++++++|.||||..++ ..+.+||||+|+||+|+++|.+++++|++.|++++.
T Consensus 397 a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 397 ASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 999999999999999999999999998653 347899999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-79 Score=594.52 Aligned_cols=421 Identities=42% Similarity=0.774 Sum_probs=406.5
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
+.||+|+|+.+..++++.++||.|+.+|++++.++..|+++|+.+|+.||..|.|++++..+|.+.|.++++++++|.+|
T Consensus 423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee 502 (881)
T KOG2452|consen 423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE 502 (881)
T ss_pred hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence 56999999999889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCC----CceeEEEeeeeeeE---------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG----PYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~PlGVv--------------- 207 (493)
|+.+.+++.|.-+..+...-+...++.+||+++|.+++.+.++|... .....++++|+|||
T Consensus 503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw 582 (881)
T KOG2452|consen 503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW 582 (881)
T ss_pred hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence 99999999999888887777899999999999999999999888542 34678999999999
Q ss_pred -----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 -----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 -----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++|+++|.|.-+|+.|..||+|++|-||||+++|+.|++.++.++.|+|.|||||++|+||+
T Consensus 583 k~aaclaa~~~k~~e~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iif 662 (881)
T KOG2452|consen 583 KTAACLAAQVLKFAELTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIF 662 (881)
T ss_pred HHHHHHHHHHhhhhhhcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
.|+|+++|+.....+.|++-|..|++..|+||..+|.|+|++++.+.++++++|+|+|.+++.||.-...+..++.+|++
T Consensus 663 ad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~ 742 (881)
T KOG2452|consen 663 ADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQ 742 (881)
T ss_pred ecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC--CHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 351 ~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
.+++.||++.|||++.+..|+|++|||+.++.++|.+..||-||||++|.+|+ |+|++++.+|.+++||+++|||+|.
T Consensus 743 ~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~ 822 (881)
T KOG2452|consen 743 HGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDI 822 (881)
T ss_pred HHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeeccc
Confidence 99999999999999999999999999999999999999999999999999996 5899999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 429 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
.++.++++.|.+|+|+||.+...+...||||+|+||+|+..|..+|.+|.+.|+|++.+
T Consensus 823 ~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~ey 881 (881)
T KOG2452|consen 823 NKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFEY 881 (881)
T ss_pred chhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEeeC
Confidence 99999999999999999999888889999999999999999999999999999998753
|
|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-77 Score=625.16 Aligned_cols=386 Identities=37% Similarity=0.575 Sum_probs=364.0
Q ss_pred CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHH
Q 011130 91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170 (493)
Q Consensus 91 g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~ 170 (493)
|++|++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++.. |+..+
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~ 77 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAA 77 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHH
Confidence 688999999999999999999999999 999999999999999999999999999999999999999999875 99999
Q ss_pred HHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------------
Q 011130 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------------- 207 (493)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------------- 207 (493)
++.+++++.+.++..+...+...+...+..++|+|||
T Consensus 78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l 157 (443)
T cd07152 78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI 157 (443)
T ss_pred HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence 9999999987766555444433445567899999999
Q ss_pred -----------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHH
Q 011130 208 -----------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 276 (493)
Q Consensus 208 -----------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~ 276 (493)
|++|+|++ +.+.++.|+.||++|+|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++
T Consensus 158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHH
Confidence 89999998 56788999999999999999999999999999988 899999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCC
Q 011130 277 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 356 (493)
Q Consensus 277 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~g 356 (493)
.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++.+||++++.+++++.++|++++++|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHH
Q 011130 357 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 436 (493)
Q Consensus 357 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 436 (493)
+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+.+.++++
T Consensus 316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 999999974 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceeEEEECCcCCCC-CCCCccCCCCCCCC-CcchHHHHHhhhhceEEE
Q 011130 437 ALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 437 ~l~~g~V~VN~~~~~~-~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~ 484 (493)
++++|+||||++.... +.+||||+|+||+| +++|+++|++|++.|+++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 9999999999876544 67999999999999 889999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-77 Score=650.74 Aligned_cols=413 Identities=25% Similarity=0.326 Sum_probs=367.7
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHH-ccCCCCCCCCHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLE 141 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~~~w~~~~~~~R~~iL~~la~~l~ 141 (493)
+...++||||+|+.+ ++.+++++||.||+++++++.++ +|+++||++|++| |+ .|+++|..+|.++|++++++|+
T Consensus 2 ~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l~ 77 (675)
T PRK11563 2 MQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYLL 77 (675)
T ss_pred CccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHHH
Confidence 345579999999975 56789999999999999999987 6999999999998 67 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhc--------CccCCCCC-C-ceeEEEeeee-eeE---
Q 011130 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPADG-P-YHVQTLHEPI-GVA--- 207 (493)
Q Consensus 142 ~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~-~-~~~~~~~~Pl-GVv--- 207 (493)
++.++|++ +++|+|||+.+++. |+..+++.++||+.++++.. +...+... + ...+..++|+ |||
T Consensus 78 ~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I 155 (675)
T PRK11563 78 ERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHI 155 (675)
T ss_pred HhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEE
Confidence 99999999 58999999999985 99999999999999886542 32222211 1 2246788997 998
Q ss_pred ---------------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEe
Q 011130 208 ---------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFT 236 (493)
Q Consensus 208 ---------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fT 236 (493)
|++|+|+|.+ +..+..++.+++|.||
T Consensus 156 ~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~---~~~~~~~~~i~~v~FT 232 (675)
T PRK11563 156 NAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSA---GDLLDHLDGQDVVTFT 232 (675)
T ss_pred CCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCH---HHHhhcCCCCCEEEEE
Confidence 6899999853 2334444679999999
Q ss_pred cCcHHHHHHHHH--HhhcCCCceeEecCCCCceEEccCCC-----HHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHH
Q 011130 237 GSTTTGKIVLQL--AAKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309 (493)
Q Consensus 237 Gs~~~g~~v~~~--a~~~~~~pv~lelgG~~p~iV~~daD-----l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~ 309 (493)
||+++|+.|++. ++. +++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|||||+++||+
T Consensus 233 GS~~~G~~i~~~~~a~~-~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~ 311 (675)
T PRK11563 233 GSAATAQKLRAHPNVVA-NSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDA 311 (675)
T ss_pred CcHHHHHHHHhhhhhhh-CCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHH
Confidence 999999999985 335 8999999999999999999995 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc-------CCCCceeeceEEecCC
Q 011130 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVK 382 (493)
Q Consensus 310 f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-------~~~g~~~~Ptvl~~~~ 382 (493)
|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++ +++++||... ...|+|++|||+.+++
T Consensus 312 f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~ 390 (675)
T PRK11563 312 VIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDD 390 (675)
T ss_pred HHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccC
Confidence 9999999999999999999999999999999999999999999999 9999999531 1358999999999998
Q ss_pred C--CccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcc--eeEEEECCcCC--------
Q 011130 383 D--DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV-------- 450 (493)
Q Consensus 383 ~--~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~V~VN~~~~-------- 450 (493)
+ ++.++++|+||||++|++|+|.||||+++|+++|||+++|||+|.+.+.+++++++ +|.||||+.+.
T Consensus 391 ~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~ 470 (675)
T PRK11563 391 PLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHG 470 (675)
T ss_pred chhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCC
Confidence 8 57999999999999999999999999999999999999999999999999999997 99999997532
Q ss_pred C-CCCCCccCCCCCCCCCc-chHHHHHhhhhceEEEEe
Q 011130 451 F-DAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 451 ~-~~~~pfGG~~~SG~G~~-~g~~~l~~~~~~k~v~~~ 486 (493)
. .+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 471 ~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 471 SPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeecC
Confidence 1 26789999999999999 569999999999998654
|
|
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-77 Score=626.32 Aligned_cols=397 Identities=45% Similarity=0.787 Sum_probs=374.1
Q ss_pred eecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhh
Q 011130 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (493)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~ 164 (493)
++||+||+++++++.++.+++++++++|++|++ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ 78 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART 78 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 369999999999999999999999999999999 999999999999999999999999999999999999999988766
Q ss_pred ccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------
Q 011130 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------- 207 (493)
Q Consensus 165 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------- 207 (493)
.|+..+++.++++++...+..+...+...+...++.++|+|||
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~ 158 (455)
T cd07093 79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL 158 (455)
T ss_pred HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence 6999999999999988776554444433345667889999999
Q ss_pred ----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++++|++++.+.++.|+.|+++++|+||||+.+|+.|++.+++ ++||+++|+|||||+||++
T Consensus 159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~ 237 (455)
T cd07093 159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237 (455)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECC
Confidence 89999998777888999999999999999999999999999998 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
|||++.|++.|++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.++|++
T Consensus 238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (455)
T cd07093 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVEL 317 (455)
T ss_pred CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCC
Q 011130 352 GVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427 (493)
Q Consensus 352 a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 427 (493)
++++|+++++||.... ..|+|++|||+.+++++++++++|+||||++|++|+|.+|||+++|+++|||+++|||+|
T Consensus 318 a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d 397 (455)
T cd07093 318 ARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRD 397 (455)
T ss_pred HHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999999999997543 358999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 428 ~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
.+.++++++++++|+|+||++....+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 398 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 398 LGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 999999999999999999998777778999999999999999999999999999985
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-77 Score=621.85 Aligned_cols=389 Identities=36% Similarity=0.543 Sum_probs=363.0
Q ss_pred eeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhh
Q 011130 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (493)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~ 163 (493)
+++||+||+++++++.++.+++++++++|+++ |+++|..+|.++|++++++|++++++|++++++|+|||+.++.
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~-----~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 76 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY-----RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR 76 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 57899999999999999999999999999764 7789999999999999999999999999999999999999997
Q ss_pred hccHHHHHHHHHHHHHhhHHhcCccCCCC-----CCceeEEEeeeeeeE-------------------------------
Q 011130 164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVA------------------------------- 207 (493)
Q Consensus 164 ~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~PlGVv------------------------------- 207 (493)
. |+..+++.++|++....+..+...+.. .+...+..++|+|||
T Consensus 77 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 155 (451)
T cd07146 77 Y-EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155 (451)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5 999999999999988776655433321 344567899999998
Q ss_pred ----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCC
Q 011130 208 ----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 265 (493)
Q Consensus 208 ----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~ 265 (493)
|++|++++.+.++++.|+.||++|+|+||||+.+|+.|.+.++ ++++++|+||||
T Consensus 156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~ 232 (451)
T cd07146 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND 232 (451)
T ss_pred CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence 8999999877788999999999999999999999999998764 479999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHH
Q 011130 266 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 345 (493)
Q Consensus 266 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~ 345 (493)
|+||++|||++.|++.|++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.|+++.+||++++.+++++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEec
Q 011130 346 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425 (493)
Q Consensus 346 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 425 (493)
.++|++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 389 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999864 489999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCC-CCcchHHHHHhhhhceEEE
Q 011130 426 HNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQ-GREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 426 ~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~-G~~~g~~~l~~~~~~k~v~ 484 (493)
+|.+.++++++++++|+||||+.+.. .+.+||||+|+||+ |+++|++++++|++.|+++
T Consensus 390 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 390 NDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99999999999999999999986554 46799999999995 8999999999999999875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-76 Score=617.17 Aligned_cols=374 Identities=36% Similarity=0.566 Sum_probs=352.2
Q ss_pred HHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHh
Q 011130 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (493)
Q Consensus 105 v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~ 184 (493)
++++|++|++||+ .|+.+|.++|.++|.+++++|+++.++|++++++|+|||..++.. |+..+++.++|++..+++.
T Consensus 1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~ 77 (429)
T cd07100 1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAF 77 (429)
T ss_pred CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4789999999999 999999999999999999999999999999999999999999985 9999999999999988876
Q ss_pred cCc-cCCCCCCceeEEEeeeeeeE-----------------------------------------------------eEE
Q 011130 185 QGL-TAPADGPYHVQTLHEPIGVA-----------------------------------------------------GVL 210 (493)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~PlGVv-----------------------------------------------------gvv 210 (493)
... ..+.. +...++.++|+||| |++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv 156 (429)
T cd07100 78 LADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF 156 (429)
T ss_pred cCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence 432 23322 44567899999999 999
Q ss_pred EeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhc
Q 011130 211 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290 (493)
Q Consensus 211 ~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 290 (493)
|+|++.+ +.+..|+.|+++++|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||++.|++.|++++|.|+
T Consensus 157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 9999854 567889999999999999999999999999988 89999999999999999999999999999999999999
Q ss_pred CCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC
Q 011130 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 370 (493)
Q Consensus 291 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g 370 (493)
||.|+++++||||++++|+|+++|++++.++++|+|+|+++++||++++.+++++.++|++++++|+++++||...+..|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997654468
Q ss_pred ceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC
Q 011130 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 450 (493)
Q Consensus 371 ~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~ 450 (493)
+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+||||++..
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 451 FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 451 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
..+.+||||+|+||+|+++|++++++||+.|+++
T Consensus 395 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 395 SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 7788999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-76 Score=617.71 Aligned_cols=393 Identities=40% Similarity=0.634 Sum_probs=368.1
Q ss_pred eeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhh
Q 011130 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (493)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a 162 (493)
|+++||+||+++++++.++.+++++++++|++|++ .|+++|..+|.++|.++++.|+++.++|++++++|+|||..++
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence 46889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHhhHHhcCccCCCC-----CCceeEEEeeeeeeE------------------------------
Q 011130 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVA------------------------------ 207 (493)
Q Consensus 163 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~PlGVv------------------------------ 207 (493)
.. |+..+++.++++++.+++..+...+.+ .+...+..++|+|||
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K 157 (453)
T cd07149 79 RK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157 (453)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 85 999999999999988777655433321 233457889999998
Q ss_pred -----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCC
Q 011130 208 -----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264 (493)
Q Consensus 208 -----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~ 264 (493)
|++|+|++.+.+++..|+.||++|+|+||||+++|+.|++.++ ++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk 234 (453)
T cd07149 158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCC
Confidence 8999999876777899999999999999999999999998763 68999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHH
Q 011130 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 344 (493)
Q Consensus 265 ~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 344 (493)
||+||++|+|++.|++.|++++|.++||.|+++++||||++++|+|+++|++++.++++|+|.++++.+||++++.++++
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 314 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER 314 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEe
Q 011130 345 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 424 (493)
Q Consensus 345 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 424 (493)
+.++|++++.+|+++++||.. .|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||+++||
T Consensus 315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~ 391 (453)
T cd07149 315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF 391 (453)
T ss_pred HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 999999999999999999865 47899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 425 THNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 425 t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
|+|.+.+.++++++++|+||||+++.. .+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 392 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 392 TNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 999999999999999999999987654 467999999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-75 Score=607.68 Aligned_cols=380 Identities=27% Similarity=0.380 Sum_probs=351.3
Q ss_pred cCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 011130 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (493)
Q Consensus 99 ~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a 178 (493)
++..+|+++++++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++|++
T Consensus 2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~ 79 (484)
T PLN02203 2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL 79 (484)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999 99999999999999999999999999999999999999999986569999999999999
Q ss_pred HhhHHhcCcc---CCC-CCCceeEEEeeeeeeE-----------------------------------------------
Q 011130 179 GWADKIQGLT---APA-DGPYHVQTLHEPIGVA----------------------------------------------- 207 (493)
Q Consensus 179 ~~~~~~~~~~---~~~-~~~~~~~~~~~PlGVv----------------------------------------------- 207 (493)
+..++..+.. .+. ..+...++.++|+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~ 159 (484)
T PLN02203 80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP 159 (484)
T ss_pred HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 8777665431 121 1234668899999999
Q ss_pred -----eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc---CCCHHHHH
Q 011130 208 -----GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE---DADVDKAA 279 (493)
Q Consensus 208 -----gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~---daDl~~aa 279 (493)
|++|+|++ +.++++.|+.|+ +|.|+||||+++|+.|++.+++ +++|+++|+|||||+||++ |||++.|+
T Consensus 160 ~~lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~aa 236 (484)
T PLN02203 160 KYLDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVAV 236 (484)
T ss_pred HhCCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHHH
Confidence 99999998 778899999995 9999999999999999999988 8999999999999999997 69999999
Q ss_pred HHHHHHHHh-hcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCE
Q 011130 280 ELAHYALFF-NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 358 (493)
Q Consensus 280 ~~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~ 358 (493)
+.+++++|. |+||.|++++|+|||++++|+|+++|++++.++++|||.++ +++||++++.+++++.++|+++++. ++
T Consensus 237 ~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~ 314 (484)
T PLN02203 237 NRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-AS 314 (484)
T ss_pred HHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-Ce
Confidence 999999996 89999999999999999999999999999999999999986 6899999999999999999999876 78
Q ss_pred EEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc
Q 011130 359 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL 438 (493)
Q Consensus 359 v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 438 (493)
+++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++
T Consensus 315 ~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l 393 (484)
T PLN02203 315 IVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSET 393 (484)
T ss_pred EEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 9999865 346899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 439 RVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 439 ~~g~V~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
++|.|+||++.. ..+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 394 ~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~ 443 (484)
T PLN02203 394 SSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRR 443 (484)
T ss_pred CcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEc
Confidence 999999998743 346799999999999999999999999999999877
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-74 Score=644.64 Aligned_cols=410 Identities=32% Similarity=0.473 Sum_probs=376.4
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCC-eEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGD-VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~-~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.+.+||| ++.+++++||+|++ +|++++.++.+++++||++|++||+ .|+++|..+|.++|++++++|++++
T Consensus 553 ~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~~ 624 (1038)
T PRK11904 553 AGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEANR 624 (1038)
T ss_pred ecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 3457788 45779999999988 9999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCcc--CCCCCCceeEEEeeeeeeE---------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~PlGVv--------------- 207 (493)
++|+.++++|+|||+.++.. |+..++++|+||+..+++..+.. .+...+...+..++|+|||
T Consensus 625 ~eL~~l~~~E~GK~~~~a~~-EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~ 703 (1038)
T PRK11904 625 AELIALCVREAGKTLQDAIA-EVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLG 703 (1038)
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999975 99999999999999988775432 2333345667889999998
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+|+.|+||||+++|+.|.+.+
T Consensus 704 ~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~ 783 (1038)
T PRK11904 704 QVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTL 783 (1038)
T ss_pred HHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 999999998888999999999999999999999999999988
Q ss_pred hhc--CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 250 AKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 250 ~~~--~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
+.. .++|+++|+|||||+||++|||+|.|++.+++|+|.++||+|+++++||||++++|+|+++|++.++++++|+|.
T Consensus 784 A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~ 863 (1038)
T PRK11904 784 AARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPR 863 (1038)
T ss_pred hhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcc
Confidence 752 267999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeC--
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK-- 403 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~-- 403 (493)
+.++++||+|++.+++++.++|+++.+ |+++++||..++ ..|+|+.|||+.. +++.++++|+||||++|++|+
T Consensus 864 d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~ 940 (1038)
T PRK11904 864 LLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKAS 940 (1038)
T ss_pred cccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCC
Confidence 999999999999999999999999866 899999997643 3599999999963 577889999999999999998
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~ 480 (493)
+++|+|+++|+++|||+++|||+|.+.+.++++++++|+||||+..+. ...+||||+|.||+| +.+|+++|++|++.
T Consensus 941 ~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ 1020 (1038)
T PRK11904 941 DLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATE 1020 (1038)
T ss_pred CHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhce
Confidence 699999999999999999999999999999999999999999986553 345799999999999 78999999999999
Q ss_pred eEEEEeC
Q 011130 481 KAVVTAL 487 (493)
Q Consensus 481 k~v~~~~ 487 (493)
|+|+++.
T Consensus 1021 ktv~~~~ 1027 (1038)
T PRK11904 1021 KTVTVNT 1027 (1038)
T ss_pred EEEEEcc
Confidence 9998763
|
|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-75 Score=602.06 Aligned_cols=375 Identities=29% Similarity=0.384 Sum_probs=346.8
Q ss_pred CCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 011130 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (493)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 179 (493)
.+.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|++.
T Consensus 2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 578999999999999999 999999999999999999999999999999999999999999875599999999999999
Q ss_pred hhHHhcCccCCCC-----CCceeEEEeeeeeeE-----------------------------------------------
Q 011130 180 WADKIQGLTAPAD-----GPYHVQTLHEPIGVA----------------------------------------------- 207 (493)
Q Consensus 180 ~~~~~~~~~~~~~-----~~~~~~~~~~PlGVv----------------------------------------------- 207 (493)
.++++.....+.. .....++.++|+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~ 159 (436)
T cd07135 80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP 159 (436)
T ss_pred HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence 8877543322211 133567899999999
Q ss_pred -----eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHH
Q 011130 208 -----GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 282 (493)
Q Consensus 208 -----gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i 282 (493)
|++|+|++.+.+++ .|+.|| +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+
T Consensus 160 ~~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~i 236 (436)
T cd07135 160 KYLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKRI 236 (436)
T ss_pred HhCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHHH
Confidence 99999998666654 588899 9999999999999999999887 899999999999999999999999999999
Q ss_pred HHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeC
Q 011130 283 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 362 (493)
Q Consensus 283 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~g 362 (493)
++++|.++||.|+++++||||++++|+|+++|++++.++++|+| ++++.+||+++..+++++.++|+++ |+++++|
T Consensus 237 ~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~g 312 (436)
T cd07135 237 LWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIG 312 (436)
T ss_pred HHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEEC
Confidence 99999999999999999999999999999999999999999999 9999999999999999999999986 8899999
Q ss_pred CcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeE
Q 011130 363 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 442 (493)
Q Consensus 363 g~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~ 442 (493)
|... ..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+
T Consensus 313 g~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~ 391 (436)
T cd07135 313 GEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGG 391 (436)
T ss_pred CCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCe
Confidence 9754 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 443 VWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 443 V~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
|+||+.+. ..+.+||||+|+||+|+++|.+++++|++.|+|.
T Consensus 392 v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 392 VVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred EEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 99998654 3578999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-74 Score=597.39 Aligned_cols=374 Identities=32% Similarity=0.471 Sum_probs=345.5
Q ss_pred HHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHH
Q 011130 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (493)
Q Consensus 104 ~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~ 183 (493)
|++++|++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||+.++.. |+..++..+++++....+
T Consensus 1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~ 77 (431)
T cd07095 1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHE 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999999975 999999999999988777
Q ss_pred hcCccCCCCCCceeEEEeeeeeeE-----------------------------------------------------eEE
Q 011130 184 IQGLTAPADGPYHVQTLHEPIGVA-----------------------------------------------------GVL 210 (493)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~PlGVv-----------------------------------------------------gvv 210 (493)
..+...+...+...++.++|+||| |++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~ 157 (431)
T cd07095 78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL 157 (431)
T ss_pred hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence 665443323345678899999999 899
Q ss_pred EeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhc
Q 011130 211 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290 (493)
Q Consensus 211 ~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 290 (493)
|+|++ +.+.++.|+.|+++|.|+||||+++|+.|++.++...++++++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 236 (431)
T cd07095 158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236 (431)
T ss_pred eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence 99998 45678999999999999999999999999998775357999999999999999999999999999999999999
Q ss_pred CCcccCCCeeEecch-hHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCC
Q 011130 291 GQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369 (493)
Q Consensus 291 GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~ 369 (493)
||.|+++++||||++ ++|+|+++|++++.++++|+|.++++.+||+++..+++++.+++++++++|+++++||...+..
T Consensus 237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~ 316 (431)
T cd07095 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG 316 (431)
T ss_pred CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999765557
Q ss_pred CceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcC
Q 011130 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 449 (493)
Q Consensus 370 g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~ 449 (493)
|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+||||+..
T Consensus 317 g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~ 395 (431)
T cd07095 317 TAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPT 395 (431)
T ss_pred CeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999 6888999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred C-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 450 V-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 450 ~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
. ..+.+||||+|+||+|+++|.++++ |++.|++
T Consensus 396 ~~~~~~~PfGG~k~SG~G~~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 396 TGASSTAPFGGVGLSGNHRPSAYYAAD-YCAYPVA 429 (431)
T ss_pred CCCCCCCCCCCcccccCCCCChHHHHH-HHhhhhc
Confidence 4 3466899999999999999999999 5555543
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-74 Score=599.16 Aligned_cols=374 Identities=40% Similarity=0.623 Sum_probs=353.1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHH
Q 011130 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (493)
Q Consensus 104 ~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~ 183 (493)
|++++|+.|++|++ .|+++|..+|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++
T Consensus 1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (431)
T cd07104 1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRR 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999999875 999999999999988877
Q ss_pred hcCccCCCC-CCceeEEEeeeeeeE------------------------------------------------------e
Q 011130 184 IQGLTAPAD-GPYHVQTLHEPIGVA------------------------------------------------------G 208 (493)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~PlGVv------------------------------------------------------g 208 (493)
..+...+.. .+...++.++|+||| |
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g 157 (431)
T cd07104 78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG 157 (431)
T ss_pred hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence 655544433 345668899999999 8
Q ss_pred EEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHh
Q 011130 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 288 (493)
Q Consensus 209 vv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~ 288 (493)
++|+|++.+.+++..|+.|+++++|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.|++++|+
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 236 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 9999998777788999999999999999999999999999988 899999999999999999999999999999999999
Q ss_pred hcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 011130 289 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368 (493)
Q Consensus 289 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 368 (493)
|+||.|+++++||||++++|+|+++|++++.++++|+|.++++.+||++++.+++++.+++++++.+|+++++||..
T Consensus 237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--- 313 (431)
T cd07104 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--- 313 (431)
T ss_pred cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCc
Q 011130 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 448 (493)
Q Consensus 369 ~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~ 448 (493)
.|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 449 DVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 449 ~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+... +.+||||+|+||+|+++|++++++|++.|+++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 6554 78999999999999999999999999999985
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=600.74 Aligned_cols=379 Identities=28% Similarity=0.419 Sum_probs=347.8
Q ss_pred cCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 011130 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (493)
Q Consensus 99 ~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a 178 (493)
..+.+|+++++++|++||+ .|+.++..+|.++|++++++|++|.++|++++++|+|||..++...|+..++..+++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~ 80 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL 80 (493)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999 99999999999999999999999999999999999999999987679999999999998
Q ss_pred HhhHHhcCcc-CC---CCCCceeEEEeeeeeeE-----------------------------------------------
Q 011130 179 GWADKIQGLT-AP---ADGPYHVQTLHEPIGVA----------------------------------------------- 207 (493)
Q Consensus 179 ~~~~~~~~~~-~~---~~~~~~~~~~~~PlGVv----------------------------------------------- 207 (493)
+..++..... .. ...+...++.++|+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~ 160 (493)
T PTZ00381 81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT 160 (493)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence 8766653322 11 11234568899999999
Q ss_pred -----eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHH
Q 011130 208 -----GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 282 (493)
Q Consensus 208 -----gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i 282 (493)
|++++|+| +.+.+..|+.|+ +|+|+||||+.+|+.|++.+++ +++|+++|||||||+||++|||++.|++.|
T Consensus 161 ~~lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i 237 (493)
T PTZ00381 161 KYLDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARRI 237 (493)
T ss_pred HhCCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHHH
Confidence 99999998 677888898887 9999999999999999999988 899999999999999999999999999999
Q ss_pred HHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeC
Q 011130 283 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 362 (493)
Q Consensus 283 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~g 362 (493)
++++|.|+||.|+++++||||++++|+|+++|++.+.++. |+|.++++++||+++..+++++.++|+ ++|+++++|
T Consensus 238 ~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~g 313 (493)
T PTZ00381 238 AWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYG 313 (493)
T ss_pred HHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEEC
Confidence 9999999999999999999999999999999999999985 777788999999999999999999996 468999999
Q ss_pred CcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeE
Q 011130 363 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 442 (493)
Q Consensus 363 g~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~ 442 (493)
|.. +..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.
T Consensus 314 G~~-~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~ 392 (493)
T PTZ00381 314 GEV-DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGA 392 (493)
T ss_pred CCc-CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 975 3467899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCcC--CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 443 VWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 443 V~VN~~~--~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
|+||+.. ...+.+||||+|+||+|+++|.+++++||+.|+|+...
T Consensus 393 v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 393 VVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred EEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 9999864 34578999999999999999999999999999998774
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-74 Score=590.02 Aligned_cols=353 Identities=33% Similarity=0.567 Sum_probs=332.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----
Q 011130 133 ILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---- 207 (493)
Q Consensus 133 L~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---- 207 (493)
|++++++|++|+++|++++++|+|||+.++.. |+..+++.++|++.|++...+...+.. .+...++.++|+|||
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 57899999999999999999999999999985 999999999999999988766543322 234578899999999
Q ss_pred -------------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecC
Q 011130 208 -------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGS 238 (493)
Q Consensus 208 -------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs 238 (493)
|++|+|++.+.++++.|+.|+++|+|+||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 9999999977788999999999999999999
Q ss_pred cHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHH
Q 011130 239 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 318 (493)
Q Consensus 239 ~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~ 318 (493)
+.+|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 9999999999988 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCC-CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceE
Q 011130 319 MKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 397 (493)
Q Consensus 319 ~~~~vg~p~~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl 397 (493)
+++++|||.++ ++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|+++++|+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 99999999999999999999999999999999998655568999999999999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 011130 398 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 477 (493)
Q Consensus 398 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~ 477 (493)
+|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.||||+.....+..||||+|+||+|+++|.+++++|
T Consensus 319 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f 398 (409)
T PRK10090 319 PVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 398 (409)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999876666789999999999999999999999
Q ss_pred hhceEEEEeC
Q 011130 478 LQVKAVVTAL 487 (493)
Q Consensus 478 ~~~k~v~~~~ 487 (493)
++.|++++.+
T Consensus 399 ~~~k~v~~~~ 408 (409)
T PRK10090 399 LQTQVVYLQS 408 (409)
T ss_pred cceEEEEEec
Confidence 9999997753
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-73 Score=592.99 Aligned_cols=371 Identities=30% Similarity=0.428 Sum_probs=341.0
Q ss_pred HHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcC
Q 011130 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (493)
Q Consensus 107 ~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 186 (493)
+++++|++||+ .|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++|++..+.+...
T Consensus 3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 80 (432)
T cd07137 3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA 80 (432)
T ss_pred HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 58999999999 9999999999999999999999999999999999999999988655999999999999988766443
Q ss_pred cc---CCC-CCCceeEEEeeeeeeE----------------------------------------------------eEE
Q 011130 187 LT---APA-DGPYHVQTLHEPIGVA----------------------------------------------------GVL 210 (493)
Q Consensus 187 ~~---~~~-~~~~~~~~~~~PlGVv----------------------------------------------------gvv 210 (493)
.. .+. ..+...++.++|+||| |++
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv 160 (432)
T cd07137 81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAI 160 (432)
T ss_pred CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeE
Confidence 21 121 1233567899999999 999
Q ss_pred EeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHH-hh
Q 011130 211 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-FN 289 (493)
Q Consensus 211 ~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~-~~ 289 (493)
|+|++ +.+.+..|+.| .+++|+||||+.+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++| .|
T Consensus 161 ~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~ 237 (432)
T cd07137 161 KVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCN 237 (432)
T ss_pred EEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhcc
Confidence 99998 56678888887 69999999999999999999988 89999999999999999999999999999999999 59
Q ss_pred cCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCC
Q 011130 290 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369 (493)
Q Consensus 290 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~ 369 (493)
+||.|++++|+|||++++|+|+++|++++.++++||| ++++++||++++.+++++.++|++++. |+++++||.. +..
T Consensus 238 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-~~~ 314 (432)
T cd07137 238 NGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-DEK 314 (432)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-CCC
Confidence 9999999999999999999999999999999999999 568999999999999999999999988 8999999865 336
Q ss_pred CceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcC
Q 011130 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 449 (493)
Q Consensus 370 g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~ 449 (493)
|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.||||++.
T Consensus 315 g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~ 394 (432)
T cd07137 315 NLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTV 394 (432)
T ss_pred CCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred C--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 450 V--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 450 ~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
. ..+.+||||+|+||+|+++|.+++++|++.|+|++
T Consensus 395 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 395 VQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred ccccCCCCCCCCcCcCcCCccccHHHHHHhccCceeeC
Confidence 4 34779999999999999999999999999998853
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-73 Score=593.59 Aligned_cols=368 Identities=30% Similarity=0.437 Sum_probs=339.6
Q ss_pred HHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcC
Q 011130 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (493)
Q Consensus 107 ~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 186 (493)
+.+++|++||+ .|+++|..+|.++|.+++++|+++.++|++++++|+|||+.++...|+..+++.++|++..++++.+
T Consensus 2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (449)
T cd07136 2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK 79 (449)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56899999999 9999999999999999999999999999999999999999998756999999999999998877654
Q ss_pred c-cCCCC---CCceeEEEeeeeeeE----------------------------------------------------eEE
Q 011130 187 L-TAPAD---GPYHVQTLHEPIGVA----------------------------------------------------GVL 210 (493)
Q Consensus 187 ~-~~~~~---~~~~~~~~~~PlGVv----------------------------------------------------gvv 210 (493)
. ..+.. .+...++.++|+||| |++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~ 159 (449)
T cd07136 80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYV 159 (449)
T ss_pred CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEE
Confidence 3 22211 234568899999999 999
Q ss_pred EeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhc
Q 011130 211 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290 (493)
Q Consensus 211 ~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 290 (493)
|+|++ +.+.+..|+.|+ ||+|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+
T Consensus 160 ~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~ 236 (449)
T cd07136 160 AVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNA 236 (449)
T ss_pred EEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHccc
Confidence 99998 556788888775 9999999999999999999987 89999999999999999999999999999999999999
Q ss_pred CCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC
Q 011130 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 370 (493)
Q Consensus 291 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g 370 (493)
||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.++|++ +++++||... ..|
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~~-~~g 309 (449)
T cd07136 237 GQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTD-RET 309 (449)
T ss_pred CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhc-----ceEEECCCcC-CCC
Confidence 99999999999999999999999999999999999997 8899999999999999999986 3899999753 358
Q ss_pred ceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC
Q 011130 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 450 (493)
Q Consensus 371 ~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~ 450 (493)
+|++|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.||||+...
T Consensus 310 ~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~ 389 (449)
T cd07136 310 LYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIM 389 (449)
T ss_pred CEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred --CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 451 --FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 451 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
..+.+||||+|+||+|+++|.+++++||+.|+|++.
T Consensus 390 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 390 HLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred cccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 347899999999999999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-73 Score=591.72 Aligned_cols=388 Identities=24% Similarity=0.290 Sum_probs=347.2
Q ss_pred ceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCC--CCCCHHHH----HHHHHHHHHHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW--PRMTAYER----SKIILRFADLLE 141 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w--~~~~~~~R----~~iL~~la~~l~ 141 (493)
+||||+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+ .| +.++..+| .++|.+++++|+
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~ 76 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR 76 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence 4799999864 57899999999999999999999999999999999999 77 66789999 899999999999
Q ss_pred Hh--HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccC--CC-CCCceeEEEeeeeeeE---------
Q 011130 142 RH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PA-DGPYHVQTLHEPIGVA--------- 207 (493)
Q Consensus 142 ~~--~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~--~~-~~~~~~~~~~~PlGVv--------- 207 (493)
++ .++|++++++|+|||+.+++. |+..+++.++||++..++..+... +. ..+...++.++|+|||
T Consensus 77 ~~~~~~~la~~~~~e~GK~~~~a~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 77 KPEVEDFFARLIQRVAPKSDAQALG-EVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence 99 599999999999999999875 999999999999998877655432 21 1244678999999999
Q ss_pred --------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHH
Q 011130 208 --------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 243 (493)
Q Consensus 208 --------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~ 243 (493)
|++|+|+|.+.+ +..|+.|+++++|+||||+++|+
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr 234 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE 234 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence 999999986655 45578899999999999999999
Q ss_pred HHHHHHhhcCCCceeEecCCCCceEEccCC-CHHHHHHHHHHHHHhhcCCcccCCCeeEecchh-HHHHHHHHHHHHhhc
Q 011130 244 IVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKR 321 (493)
Q Consensus 244 ~v~~~a~~~~~~pv~lelgG~~p~iV~~da-Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~ 321 (493)
.|...++ +++.+|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++ +|+|+++|++.++++
T Consensus 235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~ 310 (489)
T cd07126 235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR 310 (489)
T ss_pred HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence 9988765 4789999999999999999 999999999999999999999999999999995 689999999999999
Q ss_pred ccCCCCCCCCccccCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCC----CC-ceeeceEEec------CCCCccccc
Q 011130 322 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGA----KG-YYIKPTVFTG------VKDDMLIAK 389 (493)
Q Consensus 322 ~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~----~g-~~~~Ptvl~~------~~~~~~i~~ 389 (493)
++|+ +++||+++.. .+++.++|+++++ +|+++++||...+. .| .|++|||+.. ++++|++++
T Consensus 311 ~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~ 384 (489)
T cd07126 311 KLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVT 384 (489)
T ss_pred ccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHh
Confidence 9885 4789999998 8999999999997 89999999976432 23 3899999842 567999999
Q ss_pred cccccceEEEEEeCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeE--EEECCcCCCCCC----CCccCCC
Q 011130 390 DEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS--VWINCFDVFDAA----IPFGGYK 461 (493)
Q Consensus 390 ~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~--V~VN~~~~~~~~----~pfGG~~ 461 (493)
||+||||++|++|+| ++|||+++|+++|||++||||+|.++++++++++++|+ |+||+.++..+. .||||+|
T Consensus 385 eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k 464 (489)
T cd07126 385 TEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPR 464 (489)
T ss_pred CCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCc
Confidence 999999999999999 99999999999999999999999999999999999999 668887765544 8999999
Q ss_pred CCCCCCcchH
Q 011130 462 QSGQGREKGS 471 (493)
Q Consensus 462 ~SG~G~~~g~ 471 (493)
+||+|+++..
T Consensus 465 ~sg~g~~~~~ 474 (489)
T cd07126 465 GAGIGTPEAI 474 (489)
T ss_pred ccCCCCHhHH
Confidence 9999998765
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-73 Score=591.36 Aligned_cols=373 Identities=38% Similarity=0.594 Sum_probs=346.3
Q ss_pred HHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHH
Q 011130 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (493)
Q Consensus 104 ~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~ 183 (493)
|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++.. |+..+++.++++++..++
T Consensus 1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (432)
T cd07105 1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQ 77 (432)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999878765 999999999999998877
Q ss_pred hcCccCCCC-CCceeEEEeeeeeeE-----------------------------------------------------eE
Q 011130 184 IQGLTAPAD-GPYHVQTLHEPIGVA-----------------------------------------------------GV 209 (493)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~PlGVv-----------------------------------------------------gv 209 (493)
..+...+.. .+...++.++|+||| |+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv 157 (432)
T cd07105 78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV 157 (432)
T ss_pred hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence 644444432 344567899999999 89
Q ss_pred EEeeeCCc---cchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHH
Q 011130 210 LNIVSGYG---PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 286 (493)
Q Consensus 210 v~vv~~~~---~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~ 286 (493)
+|+|++.. .++++.|+.||+++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+|++.|++.|++++
T Consensus 158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999742 3578899999999999999999999999999988 8999999999999999999999999999999999
Q ss_pred HhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc
Q 011130 287 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366 (493)
Q Consensus 287 ~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 366 (493)
|+|+||.|+++++||||++++|+|+++|++++.++++| ++++||++++.+++++.++|++++++|+++++||...
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999998 5789999999999999999999999999999999764
Q ss_pred C-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEE
Q 011130 367 G-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 445 (493)
Q Consensus 367 ~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~V 445 (493)
. ..|+|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|||
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~v 391 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHI 391 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence 2 368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 446 NCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 446 N~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
|+++.. .+.+||||+|+||+|+++|.+++++|++.|+|++
T Consensus 392 N~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 392 NGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred CCCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 997654 4789999999999999999999999999999863
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-72 Score=585.14 Aligned_cols=371 Identities=30% Similarity=0.392 Sum_probs=339.1
Q ss_pred HHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-hhhhhhccHHHHHHHHHHHHHhhHHhc
Q 011130 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP-FEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (493)
Q Consensus 107 ~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~-~~~a~~~Ev~~~~~~l~~~a~~~~~~~ 185 (493)
+.+++|++||+ .|+++|..+|.++|++++++|++|.++|++++++|+||+ ..++...|+..+++.++|++..+.+..
T Consensus 2 ~~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~ 79 (434)
T cd07133 2 ALLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWM 79 (434)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 36788999999 999999999999999999999999999999999999985 566655699999999999998876654
Q ss_pred CccC-CC---CCCceeEEEeeeeeeE----------------------------------------------------eE
Q 011130 186 GLTA-PA---DGPYHVQTLHEPIGVA----------------------------------------------------GV 209 (493)
Q Consensus 186 ~~~~-~~---~~~~~~~~~~~PlGVv----------------------------------------------------gv 209 (493)
.... .. ..+...++.++|+||| |+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~ 159 (434)
T cd07133 80 KPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDE 159 (434)
T ss_pred CCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCe
Confidence 4321 11 1234568899999998 99
Q ss_pred EEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhh
Q 011130 210 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 289 (493)
Q Consensus 210 v~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~ 289 (493)
+|+|++ +.++++.|+.|+ +|+|+||||+.+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|+|
T Consensus 160 ~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 160 VAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred EEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 999998 556788888765 9999999999999999999988 8999999999999999999999999999999999999
Q ss_pred cCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--
Q 011130 290 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 367 (493)
Q Consensus 290 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-- 367 (493)
+||.|+++++||||++++|+|+++|++++.++++|+ ++++++||++++.+++++.++|++++++|+++++||....
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~ 314 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDF 314 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCC
Confidence 999999999999999999999999999999999986 4678999999999999999999999999999999987543
Q ss_pred CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECC
Q 011130 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC 447 (493)
Q Consensus 368 ~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~ 447 (493)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+
T Consensus 315 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~ 394 (434)
T cd07133 315 AATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIND 394 (434)
T ss_pred CCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 448 FDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 448 ~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+.. .++.+||||+|+||+|+++|.+++++||+.|+|+
T Consensus 395 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 395 TLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 653 4478999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-72 Score=584.48 Aligned_cols=372 Identities=35% Similarity=0.448 Sum_probs=343.3
Q ss_pred HHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcC
Q 011130 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (493)
Q Consensus 107 ~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 186 (493)
+++++|++||+ .|+++|..+|.++|.+++++|+++.++|++++++|+|||+.++...|+..+++.+++++....+...
T Consensus 2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 79 (433)
T cd07134 2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK 79 (433)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57899999999 9999999999999999999999999999999999999999998655999999999999887655433
Q ss_pred c-cC--CC-CCCceeEEEeeeeeeE----------------------------------------------------eEE
Q 011130 187 L-TA--PA-DGPYHVQTLHEPIGVA----------------------------------------------------GVL 210 (493)
Q Consensus 187 ~-~~--~~-~~~~~~~~~~~PlGVv----------------------------------------------------gvv 210 (493)
. .. +. ..+...++.++|+||| |++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v 159 (433)
T cd07134 80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEV 159 (433)
T ss_pred CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEE
Confidence 2 11 11 1234568999999999 999
Q ss_pred EeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhc
Q 011130 211 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290 (493)
Q Consensus 211 ~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 290 (493)
+++++ +.+.+..|+.|+ ++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.++
T Consensus 160 ~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~ 236 (433)
T cd07134 160 AVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNA 236 (433)
T ss_pred EEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCc
Confidence 99998 557888899997 9999999999999999999887 88999999999999999999999999999999999999
Q ss_pred CCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCC-CCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCC
Q 011130 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 369 (493)
Q Consensus 291 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p-~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~ 369 (493)
||.|+++++||||++++|+|+++|++++.+++.|+| .+.++++||++++.+++++.++|++++++|+++++||.. +..
T Consensus 237 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~-~~~ 315 (433)
T cd07134 237 GQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-DAA 315 (433)
T ss_pred CCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc-CCC
Confidence 999999999999999999999999999999988887 889999999999999999999999999999999999975 335
Q ss_pred CceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcC
Q 011130 370 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD 449 (493)
Q Consensus 370 g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~ 449 (493)
|+|++|||+.+++++|++++||+||||++|++|+|.||+|+++|+++|||+++|||+|.+.++++++++++|.||||+++
T Consensus 316 g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 395 (433)
T cd07134 316 QRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVV 395 (433)
T ss_pred CCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred C--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 450 V--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 450 ~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
. ..+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 396 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 396 LHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred cccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 4 3478999999999999999999999999999875
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-72 Score=628.68 Aligned_cols=395 Identities=29% Similarity=0.443 Sum_probs=363.8
Q ss_pred ceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
.+|+|+. .++..++++||+| +++|++|+.++.+|+++||++|++||+ .|+++|..+|.++|++++++|+++.++
T Consensus 649 p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~~~e 723 (1318)
T PRK11809 649 PMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQMQT 723 (1318)
T ss_pred CcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 3567742 2467899999998 899999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------- 207 (493)
|+.++++|+|||+.++.. ||..++++|+||+..+++... ...++|+|||
T Consensus 724 L~~l~~~EaGKt~~~A~~-EV~eaidflryyA~~a~~~~~-----------~~~~~PlGVV~~IsPWNFPlai~~g~iaa 791 (1318)
T PRK11809 724 LMGLLVREAGKTFSNAIA-EVREAVDFLRYYAGQVRDDFD-----------NDTHRPLGPVVCISPWNFPLAIFTGQVAA 791 (1318)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------CceeecccEEEEECCCccHHHHHHHHHHH
Confidence 999999999999999875 999999999999987765311 2457899998
Q ss_pred ----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC
Q 011130 208 ----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253 (493)
Q Consensus 208 ----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~ 253 (493)
|++|+|+|.+.++++.|+.||+|++|+||||+++|+.|.+.+++ +
T Consensus 792 ALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~-~ 870 (1318)
T PRK11809 792 ALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAG-R 870 (1318)
T ss_pred HHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhh-h
Confidence 89999999888899999999999999999999999999998876 4
Q ss_pred C------CceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 254 L------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 254 ~------~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
+ +|+++|+|||||+||++|||+|.|++.++.|+|.++||+|+++++||||++++|+|+++|++.+.++++|||.
T Consensus 871 l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~ 950 (1318)
T PRK11809 871 LDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPD 950 (1318)
T ss_pred cccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 4 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeeceEEecCCCCccccccccccceEEEEEeC-
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK- 403 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~- 403 (493)
+.++++||+|++.+++++.++|+++++.|++++.|+.... ..|+|++|||+.. +++.++++|+||||++|++|+
T Consensus 951 ~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~ 1028 (1318)
T PRK11809 951 RLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNR 1028 (1318)
T ss_pred cccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCC
Confidence 9999999999999999999999999999999998875422 4699999999974 567889999999999999996
Q ss_pred -CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhh
Q 011130 404 -DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQ 479 (493)
Q Consensus 404 -~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~ 479 (493)
+++|+|+++|+++|||+++|||+|.+++.++++++++|+||||+.... ...+||||+|.||+| +.+|++++..|+.
T Consensus 1029 ~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~ 1108 (1318)
T PRK11809 1029 NQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLA 1108 (1318)
T ss_pred CCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhc
Confidence 799999999999999999999999999999999999999999986543 245799999999999 6899999999999
Q ss_pred ceE
Q 011130 480 VKA 482 (493)
Q Consensus 480 ~k~ 482 (493)
.+.
T Consensus 1109 ~~~ 1111 (1318)
T PRK11809 1109 TRP 1111 (1318)
T ss_pred cCC
Confidence 874
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-71 Score=627.21 Aligned_cols=401 Identities=31% Similarity=0.462 Sum_probs=367.7
Q ss_pred cceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
+.+|+|+.. .+..++++||+| +++|++++.++.+++++||++|++||+ .|+.+|..+|.++|++++++|+++++
T Consensus 556 ~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~~~ 630 (1208)
T PRK11905 556 APLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAHMP 630 (1208)
T ss_pred cceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 446677654 356789999999 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------ 207 (493)
+|+.++++|+||++.++.. |+..++++++||+..+++..+. ..++|+|||
T Consensus 631 eL~~l~~~E~GKt~~ea~~-Ev~eaid~lr~ya~~a~~~~~~-----------~~~~P~GVv~~IsPwNfPlai~~g~i~ 698 (1208)
T PRK11905 631 ELFALAVREAGKTLANAIA-EVREAVDFLRYYAAQARRLLNG-----------PGHKPLGPVVCISPWNFPLAIFTGQIA 698 (1208)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCC-----------ceecCccEEEEEcCCcCHHHHHHHHHH
Confidence 9999999999999999875 9999999999999987765321 245688887
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~ 252 (493)
|++|+|+|.+.++++.|+.||+|+.|+||||+++|+.|.+.++..
T Consensus 699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~ 778 (1208)
T PRK11905 699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKR 778 (1208)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhh
Confidence 999999998888999999999999999999999999999998862
Q ss_pred --CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 253 --NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 253 --~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
..+|+++|+|||||+||++|||+|.|++.+++++|.++||+|+++++||||++++|+|+++|++++.++++|||.+.+
T Consensus 779 ~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~ 858 (1208)
T PRK11905 779 SGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLS 858 (1208)
T ss_pred cCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhcc
Confidence 248999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeC--CHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDE 407 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~e 407 (493)
+++||+|++.+++++.++|+++++.|+.++.|+.... ..|+|+.|||+.. +++.++++|+||||++|++|+ +++|
T Consensus 859 t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dlde 936 (1208)
T PRK11905 859 TDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDR 936 (1208)
T ss_pred CCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHH
Confidence 9999999999999999999999999998887764222 4699999999973 578899999999999999997 6999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCC--CCCCccCCCCCCCC-CcchHHHHHhhhhceEEE
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~ 484 (493)
+|+++|+++|||+++|||+|.+.++++++++++|+||||+..+.. ..+||||+|.||+| +.+|+++|.+|++.|+++
T Consensus 937 aI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~ 1016 (1208)
T PRK11905 937 VIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTP 1016 (1208)
T ss_pred HHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceee
Confidence 999999999999999999999999999999999999999865533 45799999999999 599999999999999987
Q ss_pred Ee
Q 011130 485 TA 486 (493)
Q Consensus 485 ~~ 486 (493)
+.
T Consensus 1017 ~~ 1018 (1208)
T PRK11905 1017 IP 1018 (1208)
T ss_pred cc
Confidence 54
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-71 Score=578.64 Aligned_cols=370 Identities=31% Similarity=0.420 Sum_probs=337.0
Q ss_pred HHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcC
Q 011130 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (493)
Q Consensus 107 ~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 186 (493)
+|+++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.++++++++++...
T Consensus 2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (443)
T cd07132 2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK 79 (443)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 58999999999 9999999999999999999999999999999999999999998656999999999999988877643
Q ss_pred ccCCC----CCCceeEEEeeeeeeE----------------------------------------------------eEE
Q 011130 187 LTAPA----DGPYHVQTLHEPIGVA----------------------------------------------------GVL 210 (493)
Q Consensus 187 ~~~~~----~~~~~~~~~~~PlGVv----------------------------------------------------gvv 210 (493)
...+. ......++.++|+||| |++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~ 159 (443)
T cd07132 80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECY 159 (443)
T ss_pred CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeE
Confidence 32211 1123568899999999 999
Q ss_pred EeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhc
Q 011130 211 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290 (493)
Q Consensus 211 ~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 290 (493)
|+|++.+.+ +..|+. ++||.|.||||+++|+.|.+.++. +++|+++|+|||||+||++|||++.|++.|++++|.++
T Consensus 160 ~vv~g~~~~-~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~ 236 (443)
T cd07132 160 PVVLGGVEE-TTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236 (443)
T ss_pred EEEeCCHHH-HHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcC
Confidence 999985444 555665 589999999999999999999887 89999999999999999999999999999999999999
Q ss_pred CCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC
Q 011130 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 370 (493)
Q Consensus 291 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g 370 (493)
||.|+++++||||++++|+|+++|++.+.+++.|+| ++++++||++++.+++++.++|++ +++++||... ..|
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~ 309 (443)
T cd07132 237 GQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKE 309 (443)
T ss_pred CCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCC
Confidence 999999999999999999999999999999999988 788999999999999999999974 5899998753 358
Q ss_pred ceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC
Q 011130 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 450 (493)
Q Consensus 371 ~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~ 450 (493)
+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.||||++..
T Consensus 310 ~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~ 389 (443)
T cd07132 310 RYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIM 389 (443)
T ss_pred CEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred C--CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 011130 451 F--DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488 (493)
Q Consensus 451 ~--~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~ 488 (493)
. .+.+||||+|+||+|+++|.+++++|++.|++++..+
T Consensus 390 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 390 HYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred ccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccc
Confidence 3 3679999999999999999999999999999987753
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-70 Score=565.66 Aligned_cols=366 Identities=31% Similarity=0.456 Sum_probs=334.1
Q ss_pred HHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcC
Q 011130 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (493)
Q Consensus 107 ~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 186 (493)
+++++|++||+ .|+.+|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++..+++...
T Consensus 2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~ 79 (426)
T cd07087 2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK 79 (426)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48999999999 9999999999999999999999999999999999999998777656999999999999987765543
Q ss_pred cc-C--CC-CCCceeEEEeeeeeeE----------------------------------------------------eEE
Q 011130 187 LT-A--PA-DGPYHVQTLHEPIGVA----------------------------------------------------GVL 210 (493)
Q Consensus 187 ~~-~--~~-~~~~~~~~~~~PlGVv----------------------------------------------------gvv 210 (493)
.. . +. ..+...+..++|+||| |++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~ 159 (426)
T cd07087 80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAV 159 (426)
T ss_pred CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEE
Confidence 21 1 11 1234567889999998 899
Q ss_pred EeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhc
Q 011130 211 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290 (493)
Q Consensus 211 ~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 290 (493)
|+|++. .+.+..|+.|| ++.|.||||+.+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.++
T Consensus 160 ~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~ 236 (426)
T cd07087 160 AVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNA 236 (426)
T ss_pred EEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhcc
Confidence 999984 45688899998 9999999999999999999988 89999999999999999999999999999999999999
Q ss_pred CCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC
Q 011130 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 370 (493)
Q Consensus 291 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g 370 (493)
||.|+++++||||++++|+|+++|++++++++.|+| ++.+++||++++.+++++.++++++ ++++||... ..|
T Consensus 237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g 309 (426)
T cd07087 237 GQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEE 309 (426)
T ss_pred CCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCC
Confidence 999999999999999999999999999999976666 5789999999999999999999864 899998653 358
Q ss_pred ceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC
Q 011130 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 450 (493)
Q Consensus 371 ~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~ 450 (493)
+|++|||+.+++++|+++++|+||||++|++|+|++|+|+++|+++|||+++|||+|.+.+.++++++++|+||||+++.
T Consensus 310 ~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 389 (426)
T cd07087 310 RYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLL 389 (426)
T ss_pred CEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred --CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 451 --FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 451 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 390 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 390 HAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred ccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 3478999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-69 Score=517.05 Aligned_cols=406 Identities=31% Similarity=0.512 Sum_probs=377.3
Q ss_pred CCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 011130 77 SASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156 (493)
Q Consensus 77 ~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~G 156 (493)
..+.++++.+.|.||..++.+|..++.|+++-|..|++|++ .|.+.+...|.++|+.+.+.|-+|.|.+++..++|+|
T Consensus 60 ~~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtG 137 (583)
T KOG2454|consen 60 QQSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTG 137 (583)
T ss_pred cCCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccC
Confidence 34567899999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CChhhhhhccHHHHHHHHHHHHHhhHHhcCc-cCCCC---CCceeEEEeeeeeeE-------------------------
Q 011130 157 KPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVA------------------------- 207 (493)
Q Consensus 157 k~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~PlGVv------------------------- 207 (493)
|+..++..+|+..+++.+.|.....++.... ..|.. .-...++.++|+||+
T Consensus 138 KTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGN 217 (583)
T KOG2454|consen 138 KTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGN 217 (583)
T ss_pred chhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCC
Confidence 9999999999999999999987655443322 22211 112357899999998
Q ss_pred --------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCC
Q 011130 208 --------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 255 (493)
Q Consensus 208 --------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~ 255 (493)
.+++++++. ++.++.|++|+.|++|.|.||..+++.|++.+++ .++
T Consensus 218 aIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LT 295 (583)
T KOG2454|consen 218 AIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLT 295 (583)
T ss_pred eEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcC
Confidence 678888884 6789999999999999999999999999999999 999
Q ss_pred ceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCcccc
Q 011130 256 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 335 (493)
Q Consensus 256 pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gp 335 (493)
|+++|||||+++||++|+|++..+..++++.|..+||.|...+|++||+++||.|+..|.+++..++.|.|.-...+||.
T Consensus 296 Pv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGA 375 (583)
T KOG2454|consen 296 PVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGA 375 (583)
T ss_pred cEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 336 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 336 li~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
+++..+++.++..|+||+++||+++.||.+.. ..|.|++||++.++.++|+|++||.||||+.++++++.|++|++
T Consensus 376 m~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~l 455 (583)
T KOG2454|consen 376 MCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKL 455 (583)
T ss_pred hhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhh
Confidence 99999999999999999999999999998642 57899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+|+++|||.++||+.|..+..+++.+|++|.|.||++..+. -++||||+|.||+|+..|.+||.-.++.|+|.+.
T Consensus 456 AN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 456 ANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred ccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 99999999999999999999999999999999999987764 6799999999999999999999999999999665
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-66 Score=542.73 Aligned_cols=375 Identities=48% Similarity=0.791 Sum_probs=350.8
Q ss_pred HHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhc
Q 011130 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (493)
Q Consensus 106 ~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~ 185 (493)
++++++|++|++ .|++++.++|.++|.++++.|.++.++|++++++|+||+..++.. |+..+++.+++++.+.+++.
T Consensus 1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~-ei~~~i~~l~~~~~~~~~~~ 77 (432)
T cd07078 1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALG-EVARAADTFRYYAGLARRLH 77 (432)
T ss_pred CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 368999999999 999999999999999999999999999999999999999988775 99999999999998887765
Q ss_pred CccC-CCCCCceeEEEeeeeeeE-----------------------------------------------------eEEE
Q 011130 186 GLTA-PADGPYHVQTLHEPIGVA-----------------------------------------------------GVLN 211 (493)
Q Consensus 186 ~~~~-~~~~~~~~~~~~~PlGVv-----------------------------------------------------gvv~ 211 (493)
+... +...+...+..++|+||| |+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~ 157 (432)
T cd07078 78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN 157 (432)
T ss_pred CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence 5432 222345677889999998 7999
Q ss_pred eeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcC
Q 011130 212 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 291 (493)
Q Consensus 212 vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~G 291 (493)
++++.+.+.+..|..|+++|.|.||||..+++.|.+.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.++|
T Consensus 158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 9998666688899999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred CcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CC
Q 011130 292 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KG 370 (493)
Q Consensus 292 Q~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g 370 (493)
|.|+++++||||++++|+|+++|++++.++++|+|.|+++++||++++.+++++.++|+++.++|+++++||..... .|
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g 316 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG 316 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876433 58
Q ss_pred ceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC
Q 011130 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 450 (493)
Q Consensus 371 ~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~ 450 (493)
+|++|||+.++.++++++++|+||||++|++|++++|+|+++|+.++||+++|||+|.+.+++++.++++|+|+||+++.
T Consensus 317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~ 396 (432)
T cd07078 317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSV 396 (432)
T ss_pred cEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred C-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 451 F-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 451 ~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
. .+.+||||.|.||+|+++|++++++|++.|+++
T Consensus 397 ~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 397 GAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 6 788999999999999999999999999999875
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-66 Score=539.19 Aligned_cols=362 Identities=23% Similarity=0.328 Sum_probs=324.9
Q ss_pred HHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHh
Q 011130 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (493)
Q Consensus 105 v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~ 184 (493)
+++|+++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|+|||..++. .|+..+++.+++++..+++.
T Consensus 1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~ 77 (454)
T cd07129 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREG 77 (454)
T ss_pred ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999 99999999999999999999999999999999999999999887 49999999999999876643
Q ss_pred c--CccCCC-------CCCceeEEEeeeeeeE------------------------------------------------
Q 011130 185 Q--GLTAPA-------DGPYHVQTLHEPIGVA------------------------------------------------ 207 (493)
Q Consensus 185 ~--~~~~~~-------~~~~~~~~~~~PlGVv------------------------------------------------ 207 (493)
. +..... ......++.++|+|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~ 157 (454)
T cd07129 78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI 157 (454)
T ss_pred CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 2 111110 0122347889999998
Q ss_pred -----------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc-CCCceeEecCCCCceEEccCC--
Q 011130 208 -----------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDA-- 273 (493)
Q Consensus 208 -----------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~-~~~pv~lelgG~~p~iV~~da-- 273 (493)
|++|+|++++.+.++.|+.||+|++|+||||+.+|+.|++.+++. ++||+++|+|||||+||++|+
T Consensus 158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~ 237 (454)
T cd07129 158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA 237 (454)
T ss_pred HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence 899999987767889999999999999999999999999988862 589999999999999999999
Q ss_pred -CHHHHHHHHHHHHHhhcCCcccCCCeeEecch-hHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 274 -DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 274 -Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
|++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++ ||++++.+.+++.++|++
T Consensus 238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 999999999999998864 477787888888999999
Q ss_pred HHhC-CCEEEeCCcccCCCCceeeceEEecCC---CCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCC
Q 011130 352 GVDG-GAKLETGGERLGAKGYYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427 (493)
Q Consensus 352 a~~~-ga~v~~gg~~~~~~g~~~~Ptvl~~~~---~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 427 (493)
+++. |+++++||... ..|+|++|||+.... ++|.++++|+||||++|++|+|.||+|+++|++.|||+++|||+|
T Consensus 308 a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d 386 (454)
T cd07129 308 LAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEE 386 (454)
T ss_pred HHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccC
Confidence 9998 99999999754 468999999998665 689999999999999999999999999999999999999999999
Q ss_pred --HHHHHHHHHhc--ceeEEEECCcCCCC---CCCCccC-CCCCCCCCc--chHHHHHhhhhc
Q 011130 428 --LDTANTLMRAL--RVGSVWINCFDVFD---AAIPFGG-YKQSGQGRE--KGSYSLSNYLQV 480 (493)
Q Consensus 428 --~~~~~~~~~~l--~~g~V~VN~~~~~~---~~~pfGG-~~~SG~G~~--~g~~~l~~~~~~ 480 (493)
.+.+++++++| ++|+||||+++... +.+|||| +|.||+|++ +|.+++++|+++
T Consensus 387 ~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 387 DDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred chHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 79999999999 69999999865432 4899999 999999998 799999999987
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-65 Score=533.92 Aligned_cols=361 Identities=22% Similarity=0.230 Sum_probs=320.6
Q ss_pred HHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhc
Q 011130 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (493)
Q Consensus 106 ~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~ 185 (493)
++||++|++||+ .|+++|.++|.++|.+++++|+++.++|++++++|+|||. ++. .|+..++..++|++..++...
T Consensus 2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~ 77 (442)
T cd07084 2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYR 77 (442)
T ss_pred hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcc
Confidence 679999999999 9999999999999999999999999999999999999999 555 499999999999998876532
Q ss_pred --Cc---cCCCCCCceeEEEeeeeeeE-----------------------------------------------------
Q 011130 186 --GL---TAPADGPYHVQTLHEPIGVA----------------------------------------------------- 207 (493)
Q Consensus 186 --~~---~~~~~~~~~~~~~~~PlGVv----------------------------------------------------- 207 (493)
.. ..+.......+..++|+|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P 157 (442)
T cd07084 78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157 (442)
T ss_pred ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence 21 11111124568899999999
Q ss_pred -eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCC-CHHHHHHHHHHH
Q 011130 208 -GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYA 285 (493)
Q Consensus 208 -gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~da-Dl~~aa~~i~~~ 285 (493)
|++++|++++. .+..|+.||++++|+||||+++|+.|++.++. +|+++|+|||||+||++|| |+|.|++.++++
T Consensus 158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 77999999765 88999999999999999999999999998764 7999999999999999999 699999999999
Q ss_pred HHhhcCCcccCCCeeEecch-hHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhC-CCEEEeCC
Q 011130 286 LFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG 363 (493)
Q Consensus 286 ~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~v~~gg 363 (493)
+|.++||.|+++++||||++ ++|+|+++|+++++++++| ++.+||++++ ++.++|+++++. |+++++||
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCC
Confidence 99999999999999999999 9999999999999999998 6789999765 456667777777 59999999
Q ss_pred cccC------CCCceeeceEEecCCCCc---cccccccccceEEEEEeCC--HHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 011130 364 ERLG------AKGYYIKPTVFTGVKDDM---LIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTAN 432 (493)
Q Consensus 364 ~~~~------~~g~~~~Ptvl~~~~~~~---~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~ 432 (493)
.... ..|+|++|||+.+++++| ++++||+||||++|++|+| ++|+|+++|+++|||+++|||+|.+.++
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 384 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQ 384 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHH
Confidence 7522 258999999999999987 9999999999999999999 9999999999999999999999999999
Q ss_pred HHHHhc-ceeEEEECCc-CC-CCCCCCccC-CCCCCCCCcc-hHHHHHhhhhceEE
Q 011130 433 TLMRAL-RVGSVWINCF-DV-FDAAIPFGG-YKQSGQGREK-GSYSLSNYLQVKAV 483 (493)
Q Consensus 433 ~~~~~l-~~g~V~VN~~-~~-~~~~~pfGG-~~~SG~G~~~-g~~~l~~~~~~k~v 483 (493)
++++++ ++|+||||.. +. ..+..|||| .|.||+|++. |.+++++|++...+
T Consensus 385 ~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 385 ELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 999999 9999999976 33 445678877 8899999986 99999999988654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-64 Score=529.16 Aligned_cols=379 Identities=19% Similarity=0.258 Sum_probs=324.4
Q ss_pred eeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhh
Q 011130 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (493)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~ 163 (493)
.-+||+|++++++++.++. +++|++|++||+ .|+++++.+|.++|++++++|+++.++|++++++|+|||+.++.
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~ 142 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAF 142 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH
Confidence 3469999999999999986 899999999999 99999999999999999999999999999999999999998874
Q ss_pred h-c---cHHHHHHHHHHHHHhhHHhcCccC---CCC-CC---ceeEEEeeeeeeE-------------------------
Q 011130 164 Q-T---EVPMTTRLFRYYAGWADKIQGLTA---PAD-GP---YHVQTLHEPIGVA------------------------- 207 (493)
Q Consensus 164 ~-~---Ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~~---~~~~~~~~PlGVv------------------------- 207 (493)
. + ++...++.++|+++.+.++.+... +.. .+ ...+..++|+|||
T Consensus 143 e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN 222 (551)
T TIGR02288 143 QAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGN 222 (551)
T ss_pred hccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCC
Confidence 2 1 677889999999988877766533 211 11 1223478999998
Q ss_pred --------------------------------eEEEeeeCC-ccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCC
Q 011130 208 --------------------------------GVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 254 (493)
Q Consensus 208 --------------------------------gvv~vv~~~-~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~ 254 (493)
|++|+|++. +.++++.|+.||+|++|.||||+++|+.|++.++.
T Consensus 223 ~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~--- 299 (551)
T TIGR02288 223 PVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ--- 299 (551)
T ss_pred eEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc---
Confidence 899999985 67789999999999999999999999999998764
Q ss_pred CceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecch---------hHHHHHHHHHHHHhhcccCC
Q 011130 255 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 255 ~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~vg~ 325 (493)
+++++|||||||+||++|+|+|.+++.+++++|.|+||.|++++|||||++ +||+|+++|++++.++ +||
T Consensus 300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd 378 (551)
T TIGR02288 300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD 378 (551)
T ss_pred CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence 799999999999999999999999999999999999999999999999999 7999999999999999 999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCC-ceeeceEEecCCCCccccccccccceEEEEE
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKG-YYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 401 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 401 (493)
|.++.+++||++++.+++++ +++++.| ++++||.... ..| +|++|||+....++|++++||+||||++|++
T Consensus 379 p~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~ 453 (551)
T TIGR02288 379 PARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVA 453 (551)
T ss_pred cccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEE
Confidence 99999999999999999995 5666778 6666665321 135 6889999954445999999999999999999
Q ss_pred eCCHHHHHHHHHcC--CCC-cEEEEecCCHHHHHHHHHhc----------ceeEEEECCcCCCCCCCCccCCCCCCCC-C
Q 011130 402 YKDLDEVIQRSNAS--QYG-LAAGVFTHNLDTANTLMRAL----------RVGSVWINCFDVFDAAIPFGGYKQSGQG-R 467 (493)
Q Consensus 402 ~~~~~eai~~~n~~--~~g-l~a~v~t~d~~~~~~~~~~l----------~~g~V~VN~~~~~~~~~pfGG~~~SG~G-~ 467 (493)
|+|.||||+++|++ +|| |+++|||+|.+.++++.+++ ++|.|+||.. .||++.+.||.. .
T Consensus 454 ~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg~n~~ 527 (551)
T TIGR02288 454 VDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS------AAFSDFHGTGGNPA 527 (551)
T ss_pred ECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC------CCCCCCCCCCCCCc
Confidence 99999999999998 566 99999999999999999999 7888888874 357777777754 3
Q ss_pred cchHHHHHhhhhceE
Q 011130 468 EKGSYSLSNYLQVKA 482 (493)
Q Consensus 468 ~~g~~~l~~~~~~k~ 482 (493)
.+..++--.|...|-
T Consensus 528 a~~~~~~~~~~~~r~ 542 (551)
T TIGR02288 528 ANASLSDGAFVANRF 542 (551)
T ss_pred cCCcccchhhhhcce
Confidence 334444445555443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-64 Score=529.01 Aligned_cols=394 Identities=18% Similarity=0.223 Sum_probs=340.5
Q ss_pred CCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Q 011130 77 SASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156 (493)
Q Consensus 77 ~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~G 156 (493)
+.++...+++||+|++++++++.+ |++++|++|++|++ .|++++..+|.++|++++++|.+++++|++++++|+|
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G 135 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG 135 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence 456788999999999999999887 89999999999999 9999999999999999999999999999999999999
Q ss_pred CChhhhhhc----cHHHHHHHHHHHHHhhHHhcCccCC---CCC----CceeEEEeeeeeeE------------------
Q 011130 157 KPFEQSAQT----EVPMTTRLFRYYAGWADKIQGLTAP---ADG----PYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 157 k~~~~a~~~----Ev~~~~~~l~~~a~~~~~~~~~~~~---~~~----~~~~~~~~~PlGVv------------------ 207 (493)
|++.++... |+..+++.++|+++.+.++.+.... ... .......++|+||+
T Consensus 136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~ 215 (549)
T cd07127 136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF 215 (549)
T ss_pred CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence 999877632 6999999999999988776654221 110 01123477999998
Q ss_pred ---------------------------------------eEEEeeeCC-ccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~-~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|+||+|++. +.++++.|+.||+|++|.||||+.+|+.|++
T Consensus 216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~ 295 (549)
T cd07127 216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA 295 (549)
T ss_pred HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 899999975 4678999999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecch---------hHHHHHHHHHHHH
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALA 318 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~ 318 (493)
.++. +++++|+|||||+||++|+|++.+++.+++++|.++||.|++++|||||++ +||+|+++|++++
T Consensus 296 ~a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~ 372 (549)
T cd07127 296 NARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI 372 (549)
T ss_pred Hhcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence 8864 799999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred hhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCC-ceeeceEEecCCCCcccccccccc
Q 011130 319 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKG-YYIKPTVFTGVKDDMLIAKDEIFG 394 (493)
Q Consensus 319 ~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~i~~~E~fg 394 (493)
+++ +|||.+..+.+||++++.+++++.+ +++.|+ +++||.... ..| +|++|||+....++|++++||+||
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG 446 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG 446 (549)
T ss_pred HHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence 999 9999999999999999999999865 445565 778876432 134 566999999888999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHcCC--C-CcEEEEecCCHHHHHHHHHhc-cee-EEEECCcCCCCCCC--CccCCCCCCCC-
Q 011130 395 PVQSILKYKDLDEVIQRSNASQ--Y-GLAAGVFTHNLDTANTLMRAL-RVG-SVWINCFDVFDAAI--PFGGYKQSGQG- 466 (493)
Q Consensus 395 Pvl~v~~~~~~~eai~~~n~~~--~-gl~a~v~t~d~~~~~~~~~~l-~~g-~V~VN~~~~~~~~~--pfGG~~~SG~G- 466 (493)
||++|++|+|.+|+|+++|++. + ||+++|||+|.+.++++.+++ ++| +++||+.......+ ||||++.||..
T Consensus 447 PVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~ 526 (549)
T cd07127 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP 526 (549)
T ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc
Confidence 9999999999999999999973 4 699999999999999999995 555 99999654444444 59999999976
Q ss_pred CcchHHHHHhhhhceEEE
Q 011130 467 REKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 467 ~~~g~~~l~~~~~~k~v~ 484 (493)
..+..+..-.|...|-.+
T Consensus 527 ~a~~~~~~~~fv~~r~~~ 544 (549)
T cd07127 527 AANAALTDGAFVANRFRV 544 (549)
T ss_pred ccccccchhhhhhcceEE
Confidence 455666666777665433
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-64 Score=486.98 Aligned_cols=371 Identities=27% Similarity=0.397 Sum_probs=333.9
Q ss_pred HHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHh
Q 011130 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (493)
Q Consensus 105 v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~ 184 (493)
+++.++++|.+|.+| +.-|.+.|.+.|+++...+++|.++|.+++..|.+|+..++...|+...++.++++....++.
T Consensus 4 ~~~~v~~~R~~F~sG--rtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w 81 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSG--RTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW 81 (477)
T ss_pred HHHHHHHHHHHHhcC--CcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 556699999999954 888999999999999999999999999999999999999988889999988888877554443
Q ss_pred c----CccCCCCCCceeEEEeeeeeeE----------------------------------------------------e
Q 011130 185 Q----GLTAPADGPYHVQTLHEPIGVA----------------------------------------------------G 208 (493)
Q Consensus 185 ~----~~~~~~~~~~~~~~~~~PlGVv----------------------------------------------------g 208 (493)
. ............+++.+|+||| +
T Consensus 82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~ 161 (477)
T KOG2456|consen 82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQD 161 (477)
T ss_pred ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcc
Confidence 3 2222233345678999999999 8
Q ss_pred EEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHh
Q 011130 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 288 (493)
Q Consensus 209 vv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~ 288 (493)
.+.||.|.-+++++ |..| ++|+|+||||+.+|+.|+.++++ +++||+||||||+|++|++|+|++-+++.|+++++.
T Consensus 162 ~~~VV~Ggv~ETt~-LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~ 238 (477)
T KOG2456|consen 162 LIRVVNGGVPETTE-LLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWM 238 (477)
T ss_pred eEEEecCCCchHHH-HHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhc
Confidence 89999995555554 5555 89999999999999999999999 999999999999999999999999999999999999
Q ss_pred hcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 011130 289 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368 (493)
Q Consensus 289 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 368 (493)
|+||.|.++++|+++.+++.+|+++++..++++ +|+..+++.+++-+|+..+++|+...+++- .+|+.||..+.
T Consensus 239 N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~- 312 (477)
T KOG2456|consen 239 NSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE- 312 (477)
T ss_pred cCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch-
Confidence 999999999999999999999999999998886 788888999999999999999999998742 68999998644
Q ss_pred CCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCc
Q 011130 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 448 (493)
Q Consensus 369 ~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~ 448 (493)
...|++|||+.+++.++++|+||+||||++|+.+.+++|+|+.||+.+-+|++|+||+|.+...++..++.+|.|.+|+.
T Consensus 313 ~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~ 392 (477)
T KOG2456|consen 313 SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDV 392 (477)
T ss_pred hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecce
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 449 --DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 449 --~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+..-..+||||+|+||+|++||.++++.|++.|++..+
T Consensus 393 i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 393 IMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred EEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 33457899999999999999999999999999998765
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-63 Score=514.32 Aligned_cols=352 Identities=21% Similarity=0.222 Sum_probs=300.7
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhh
Q 011130 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181 (493)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~ 181 (493)
-+|+++|+++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..++. ++.+++++...
T Consensus 3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~ 73 (429)
T cd07121 3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT 73 (429)
T ss_pred hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence 4789999999999999 99999999999999999999999999999999999999987653 34566665422
Q ss_pred HHhcCc-cC-CCCCCceeEEEeeeeeeE----------------------------------------------------
Q 011130 182 DKIQGL-TA-PADGPYHVQTLHEPIGVA---------------------------------------------------- 207 (493)
Q Consensus 182 ~~~~~~-~~-~~~~~~~~~~~~~PlGVv---------------------------------------------------- 207 (493)
...... .. ........++.++|+|||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~ 153 (429)
T cd07121 74 PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE 153 (429)
T ss_pred CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence 111100 00 011223457888999999
Q ss_pred -----eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHH
Q 011130 208 -----GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 282 (493)
Q Consensus 208 -----gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i 282 (493)
|++|+|++++.+.++.|+.||+||+|+||||+.+|+.|++. .||+++|+|||||+||++|||+|.|++.|
T Consensus 154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i 228 (429)
T cd07121 154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDI 228 (429)
T ss_pred cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHH
Confidence 88999998777788999999999999999999999999873 48999999999999999999999999999
Q ss_pred HHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhC--CCEEE
Q 011130 283 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG--GAKLE 360 (493)
Q Consensus 283 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~--ga~v~ 360 (493)
++++|+|+||.|++++|||||+++||+|+++|++. . .++++..+++++.++|+++.+. |++++
T Consensus 229 ~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~ 293 (429)
T cd07121 229 VQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKW 293 (429)
T ss_pred HhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccc
Confidence 99999999999999999999999999999999885 1 2478999999999999998864 79999
Q ss_pred eCCcc---cCCCCceee---ceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCc--EEEEecCCHHHHH
Q 011130 361 TGGER---LGAKGYYIK---PTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTAN 432 (493)
Q Consensus 361 ~gg~~---~~~~g~~~~---Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d~~~~~ 432 (493)
+||.. ....|+|++ |||+.+++++|+++++|+||||++|++|+|+||||+++|+++||| +++|||+|.+.++
T Consensus 294 ~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~ 373 (429)
T cd07121 294 VGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLT 373 (429)
T ss_pred cCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHH
Confidence 98853 112478877 499999999999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHhcceeEEEECCcCCCCCCCCccCCCCCCC--CCcc--hHHHHHhhhhceEEE
Q 011130 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ--GREK--GSYSLSNYLQVKAVV 484 (493)
Q Consensus 433 ~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~--G~~~--g~~~l~~~~~~k~v~ 484 (493)
++++++++|+||||+++. +.+||||+|+|++ |..- |.-+-+.||+.|..+
T Consensus 374 ~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (429)
T cd07121 374 KMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTGEGLTSARTFTRRRRCV 427 (429)
T ss_pred HHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcCcCccChhhhheeeeec
Confidence 999999999999998644 6799999999998 5333 334455666655443
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-62 Score=503.43 Aligned_cols=355 Identities=17% Similarity=0.215 Sum_probs=295.8
Q ss_pred HHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHH--HHHHHHHhhH
Q 011130 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR--LFRYYAGWAD 182 (493)
Q Consensus 105 v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~--~l~~~a~~~~ 182 (493)
+++|+++|++||+ .|+++|+.+|.++|++++++|++|+++|+++++.|+|||+.+++. ++..... .+++++.
T Consensus 1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~--- 74 (439)
T cd07081 1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD--- 74 (439)
T ss_pred CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---
Confidence 4789999999999 999999999999999999999999999999999999999998874 5544333 2333332
Q ss_pred HhcCccCCCCCCceeEEEeeeeeeE-------------------------------------------------------
Q 011130 183 KIQGLTAPADGPYHVQTLHEPIGVA------------------------------------------------------- 207 (493)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------------------------- 207 (493)
...+...+...+...++.++|+|||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 2222222332334568899999999
Q ss_pred --eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHH
Q 011130 208 --GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 285 (493)
Q Consensus 208 --gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~ 285 (493)
|++|+|++.+.+.++.|+.||+|++|.||||+.+ ++.+++ ++||+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v----~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAV----VKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHH----HHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 8999999877778999999999999999999984 555666 789999999999999999999999999999999
Q ss_pred HHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCc-
Q 011130 286 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE- 364 (493)
Q Consensus 286 ~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~- 364 (493)
+|+++||.|++.+|||||+++||+|+++|++++ ||+++..+++++.++|+++.+.|++++.|+.
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~ 294 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY 294 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence 999999999999999999999999999998862 8999999999999999999999998754432
Q ss_pred c-cCCCCceeece---EEecCC--CCccccccccccceEEEEEeCCHHHHHHHHHcC----CCCcEEEEecCC---HHHH
Q 011130 365 R-LGAKGYYIKPT---VFTGVK--DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHN---LDTA 431 (493)
Q Consensus 365 ~-~~~~g~~~~Pt---vl~~~~--~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d---~~~~ 431 (493)
. ....|+|++|| ++.++. ++|.+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+++
T Consensus 295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a 374 (439)
T cd07081 295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENM 374 (439)
T ss_pred HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHH
Confidence 1 11358899998 998888 999999999999999999999999999999965 799999999999 9999
Q ss_pred HHHHHhcceeEEEECCcCCCC---CCCCccCCCCC--CCCCcchH-----HHHHhhhhceEEEE
Q 011130 432 NTLMRALRVGSVWINCFDVFD---AAIPFGGYKQS--GQGREKGS-----YSLSNYLQVKAVVT 485 (493)
Q Consensus 432 ~~~~~~l~~g~V~VN~~~~~~---~~~pfGG~~~S--G~G~~~g~-----~~l~~~~~~k~v~~ 485 (493)
+++++++++|.||||.+..+. -.--|||.+.+ |.|..+|. -+..+|++.|.|.+
T Consensus 375 ~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 375 NQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999999999765322 22346565544 22332222 14667788777654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-61 Score=469.67 Aligned_cols=419 Identities=25% Similarity=0.376 Sum_probs=376.2
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~ 141 (493)
....|+.|||+.+. +...+.+.+|++ +.++++|..++.+++++||++|.+|++ .|..+|..+|.+|++|.|++|.
T Consensus 57 ~~evP~vIg~~~v~--t~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlis 132 (561)
T KOG2455|consen 57 PLEVPLVIGDKEVY--TNDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIS 132 (561)
T ss_pred ceeccEEECCeeee--cCCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhc
Confidence 34568999999997 445578889986 789999999999999999999999998 9999999999999999999999
Q ss_pred -HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeee-eeE-----------
Q 011130 142 -RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVA----------- 207 (493)
Q Consensus 142 -~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~Pl-GVv----------- 207 (493)
+++-+|....++.+||...+|..+-..+.++++|+.+..+.++....++. ..+......++|+ |.|
T Consensus 133 tkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI 212 (561)
T KOG2455|consen 133 TKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAI 212 (561)
T ss_pred chHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeee
Confidence 88999999999999999999876447788999999999888877665443 3334444555555 444
Q ss_pred -----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHH
Q 011130 208 -----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246 (493)
Q Consensus 208 -----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 246 (493)
|++|+|+++++..++.+..+|.+..+-||||+.+-+.++
T Consensus 213 ~gnLa~aPaLMGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lw 292 (561)
T KOG2455|consen 213 GGNLAGAPALMGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLW 292 (561)
T ss_pred ccccccChhhhcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHH
Confidence 999999999999999999999999999999999999999
Q ss_pred HHHhhcC------CCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhh
Q 011130 247 QLAAKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 320 (493)
Q Consensus 247 ~~a~~~~------~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 320 (493)
++.++ + ..+++.|+||||..+|+++||++.++...++++|.++||.|.+.+|+||+++++..+.++|.+...+
T Consensus 293 k~V~~-n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q 371 (561)
T KOG2455|consen 293 KKVGE-NVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQ 371 (561)
T ss_pred HHHHh-hhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhh
Confidence 98876 4 4579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-CCCCCccccCCCHHHHHHHHHHHHHHHhC-CCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEE
Q 011130 321 RVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 398 (493)
Q Consensus 321 ~~vg~p-~~~~~~~gpli~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~ 398 (493)
+++||| .|.++.+||+|+.+.|.|+.++|+.|+.. ..++++||+.++..|+|+.|||+..-.|.++++.||+||||++
T Consensus 372 ~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLs 451 (561)
T KOG2455|consen 372 LKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLS 451 (561)
T ss_pred cccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeE
Confidence 999998 88999999999999999999999999763 5889999999999999999999999999999999999999999
Q ss_pred EEEeCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHHhcc--eeEEEECCcCCCC--CCCCccCCCCCCCC-Ccch
Q 011130 399 ILKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFD--AAIPFGGYKQSGQG-REKG 470 (493)
Q Consensus 399 v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~V~VN~~~~~~--~~~pfGG~~~SG~G-~~~g 470 (493)
|+.|+| ++|+++++ |.++|||+.+||++|.+.+.+..+.|+ +|+.|||+-.+.+ ...||||.+.||.. +.||
T Consensus 452 VyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGg 531 (561)
T KOG2455|consen 452 VYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGG 531 (561)
T ss_pred EEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCC
Confidence 999965 89999999 568999999999999999999999886 9999999876543 67899999999976 7899
Q ss_pred HHHHHhhhhceEEEEe
Q 011130 471 SYSLSNYLQVKAVVTA 486 (493)
Q Consensus 471 ~~~l~~~~~~k~v~~~ 486 (493)
++.+..|+.++.+-..
T Consensus 532 p~~l~RwtSp~~ikEt 547 (561)
T KOG2455|consen 532 PHYLLRWTSPLSIKET 547 (561)
T ss_pred ceEEEeecCcchhhhc
Confidence 9999999998776433
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-62 Score=504.09 Aligned_cols=335 Identities=21% Similarity=0.242 Sum_probs=292.8
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh----hhhh-------ccHHHHH
Q 011130 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMTT 171 (493)
Q Consensus 103 ~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~----~a~~-------~Ev~~~~ 171 (493)
+|+++++++|++||+ .|+++|..+|.++|++++++|++|.++|++++++|+||+.. ++.. .|+..++
T Consensus 4 ~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~ 81 (417)
T PRK00197 4 EYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIA 81 (417)
T ss_pred hHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHH
Confidence 689999999999999 99999999999999999999999999999999988877642 3321 3788899
Q ss_pred HHHHHHHHhhHHhcCccCCC---CCCceeEEEeeeeeeE-----------------------------------------
Q 011130 172 RLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVA----------------------------------------- 207 (493)
Q Consensus 172 ~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~PlGVv----------------------------------------- 207 (493)
+.+++++.+++.. +...+. ..+...++.++|+|||
T Consensus 82 ~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~ 160 (417)
T PRK00197 82 EGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160 (417)
T ss_pred HHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence 9999999877643 333322 2233578899999998
Q ss_pred --------------eEEEeeeCCc-cchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccC
Q 011130 208 --------------GVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 272 (493)
Q Consensus 208 --------------gvv~vv~~~~-~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~d 272 (493)
|++|+|++.+ .++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||++|
T Consensus 161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCC
Confidence 8999999644 45788899999999999999999999998853 5899999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHH
Q 011130 273 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 352 (493)
Q Consensus 273 aDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a 352 (493)
||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++++++
T Consensus 237 Adl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE---------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999876532
Q ss_pred HhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 011130 353 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432 (493)
Q Consensus 353 ~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 432 (493)
++ ||... .+ |+ |||+ .++|.++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus 288 ------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~ 353 (417)
T PRK00197 288 ------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAE 353 (417)
T ss_pred ------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHH
Confidence 22 11110 12 33 9998 467999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceeEEEECCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 011130 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 433 ~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++++++++|+||||++....+..||||.|+||+| +++|.+++++|++.|++++.+
T Consensus 354 ~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 354 RFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred HHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence 9999999999999998766778899999999999 999999999999999998754
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-62 Score=502.82 Aligned_cols=329 Identities=19% Similarity=0.229 Sum_probs=287.0
Q ss_pred HHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh----hhhh-------ccHHHHHHHHH
Q 011130 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMTTRLFR 175 (493)
Q Consensus 107 ~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~----~a~~-------~Ev~~~~~~l~ 175 (493)
.++++|++||+ .|+++|.++|.++|.++++.|++|.++|+++++.|+||+.. ++.. .|+..+++.++
T Consensus 2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~ 79 (406)
T cd07079 2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR 79 (406)
T ss_pred hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence 46889999999 99999999999999999999999999999999777666543 2221 38889999999
Q ss_pred HHHHhhHHhcCccCCC---CCCceeEEEeeeeeeE---------------------------------------------
Q 011130 176 YYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVA--------------------------------------------- 207 (493)
Q Consensus 176 ~~a~~~~~~~~~~~~~---~~~~~~~~~~~PlGVv--------------------------------------------- 207 (493)
+++...+. .+...+. ..+...++.++|+|||
T Consensus 80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 99876543 2332222 1223567899999999
Q ss_pred ----------eEEEeeeCCcc-chhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHH
Q 011130 208 ----------GVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 276 (493)
Q Consensus 208 ----------gvv~vv~~~~~-~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~ 276 (493)
|++|+|++.+. +.++.|..||++|+|+||||+++|+.|++.+ ++|+++|||||||+||++|||+|
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dADl~ 234 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESADLE 234 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHH
Confidence 99999998544 6788899999999999999999999998865 58999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCC
Q 011130 277 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 356 (493)
Q Consensus 277 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~g 356 (493)
.|++.+++++|.|+| .|++++|||||+++||+|+++|++++.+ .|
T Consensus 235 ~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~g 279 (406)
T cd07079 235 MAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AG 279 (406)
T ss_pred HHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CC
Confidence 999999999999999 9999999999999999999999997764 25
Q ss_pred CEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHH
Q 011130 357 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR 436 (493)
Q Consensus 357 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 436 (493)
++++.|+.. ..|++|| ++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++
T Consensus 280 a~~~~g~~~----~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~ 351 (406)
T cd07079 280 VELRGDEET----LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLR 351 (406)
T ss_pred CEEecCHHH----HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHH
Confidence 665533321 1377888 68899999999999999999999999999999999999999999999999999999
Q ss_pred hcceeEEEECCcCCCCCCCCccCCCCCCC----CCcchHHHHHhhhhceEEEE
Q 011130 437 ALRVGSVWINCFDVFDAAIPFGGYKQSGQ----GREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 437 ~l~~g~V~VN~~~~~~~~~pfGG~~~SG~----G~~~g~~~l~~~~~~k~v~~ 485 (493)
++++|+||||+++...+..||||.++||+ |+++|.+++++|++.|+++.
T Consensus 352 ~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 352 EVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred hCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 99999999999877677789999999998 89999999999999999875
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-61 Score=502.17 Aligned_cols=353 Identities=22% Similarity=0.214 Sum_probs=298.9
Q ss_pred CCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 011130 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (493)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 179 (493)
...+|+++++++|++||+ .|+.++..+|.++|+++++.|++|.++|++++++|+|||+.+++. ..+++++.
T Consensus 33 ~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~ 103 (465)
T PRK15398 33 GVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAE 103 (465)
T ss_pred cHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHH
Confidence 678999999999999999 999999999999999999999999999999999999999887653 23455544
Q ss_pred hhHH---hcCccCCCCCCceeEEEeeeeeeE-------------------------------------------------
Q 011130 180 WADK---IQGLTAPADGPYHVQTLHEPIGVA------------------------------------------------- 207 (493)
Q Consensus 180 ~~~~---~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------------------- 207 (493)
.... +...... ..+...++.++|+|||
T Consensus 104 ~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~ 182 (465)
T PRK15398 104 KTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEA 182 (465)
T ss_pred HhccccccccCccc-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHH
Confidence 3321 1111111 1224567888999999
Q ss_pred --------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHH
Q 011130 208 --------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 279 (493)
Q Consensus 208 --------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa 279 (493)
|++|+|++.+.+.++.|++||+||+|+||||+++|+.|++ ..||+++|+|||||+||++|||+|.|+
T Consensus 183 l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa 257 (465)
T PRK15398 183 IVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAA 257 (465)
T ss_pred HHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHH
Confidence 8999999866778899999999999999999999999988 358999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEE
Q 011130 280 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 359 (493)
Q Consensus 280 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v 359 (493)
+.|++++|.|+||.|+++++||||+++||+|+++|+++ .+|++++.+++++.++|+++.++++++
T Consensus 258 ~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~---------------~~~li~~~~~~~v~~~l~~~~~~~~~~ 322 (465)
T PRK15398 258 RDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN---------------GAVLLTAEQAEKLQKVVLKNGGTVNKK 322 (465)
T ss_pred HHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc---------------CCccCCHHHHHHHHHHHhhcccccchh
Confidence 99999999999999999999999999999999999885 137999999999999999654456677
Q ss_pred EeCCcc---cCCCCcee---eceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCc--EEEEecCCHHHH
Q 011130 360 ETGGER---LGAKGYYI---KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTA 431 (493)
Q Consensus 360 ~~gg~~---~~~~g~~~---~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d~~~~ 431 (493)
+.||.. ....|+++ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+++
T Consensus 323 ~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a 402 (465)
T PRK15398 323 WVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNL 402 (465)
T ss_pred hhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHH
Confidence 777642 12246666 3799999999999999999999999999999999999999999988 999999999999
Q ss_pred HHHHHhcceeEEEECCcCCCCCCCCccCCCCCCC--C-Cc-chHHHHHhhhhceEEE
Q 011130 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ--G-RE-KGSYSLSNYLQVKAVV 484 (493)
Q Consensus 432 ~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~--G-~~-~g~~~l~~~~~~k~v~ 484 (493)
+++++++++|+||||++.. +.+||||.|.|.+ | .. .|..+-..|+..+.++
T Consensus 403 ~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~~~~~~g~~~~~~~~~~~~~~~~ 457 (465)
T PRK15398 403 NKMARAIQTSIFVKNGPSY--AGLGLGGEGFTTFTIATPTGEGVTSARTFTRRRRCV 457 (465)
T ss_pred HHHHHhCCceEEEECCCCc--cccCcCCCCCceeeecccCCCCccchhhhhhheeec
Confidence 9999999999999997642 6799999999985 2 22 2444555666655544
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-62 Score=456.87 Aligned_cols=415 Identities=28% Similarity=0.470 Sum_probs=382.4
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
.-..+|+|. .+|..++.++|++.++|++|..++.+|.+.+++.|++|++ .|-..|..+|.+|.+.+.|.|+...+-
T Consensus 21 ~gvy~gkw~--a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~ 96 (507)
T KOG2453|consen 21 AGVYHGKWA--ASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQN 96 (507)
T ss_pred cceeeeeec--cCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHH
Confidence 345678996 4789999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCce-eEEEeeeeeeE------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPIGVA------------------ 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~-~~~~~~PlGVv------------------ 207 (493)
|-.++++|+||...+.. +|+..-++.|+|..++.+.+.+...|...+.+ ...+..|+|+|
T Consensus 97 lg~lvslemgkilaegv-gevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnna 175 (507)
T KOG2453|consen 97 LGKLVSLEMGKILAEGV-GEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNA 175 (507)
T ss_pred HhhhhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCch
Confidence 99999999999999987 59999999999999999999999888765444 45577899988
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
+......| +.+.+.++..+.+++.+.||||+++++.+.+.
T Consensus 176 iaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~ 254 (507)
T KOG2453|consen 176 IAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQ 254 (507)
T ss_pred hhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHH
Confidence 33444444 67789999999999999999999999999988
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
... ..-+..|||||||+.||.+|||+..++...++++...+||+|+...|++||+++||+.+++|++...++++|+|+|
T Consensus 255 vqa-rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld 333 (507)
T KOG2453|consen 255 VQA-RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLD 333 (507)
T ss_pred HHH-HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCC
Confidence 776 4567899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHH
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 408 (493)
+.+.+||+.++++..+.+..++++++.|.++++||+..+..|+|++|||++ ...|.++..+|.|.||+.|.+|++++|+
T Consensus 334 ~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea 412 (507)
T KOG2453|consen 334 SNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEA 412 (507)
T ss_pred CCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhh
Confidence 999999999999999999999999999999999999988899999999998 8899999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHH--hcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 409 IQRSNASQYGLAAGVFTHNLDTANTLMR--ALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 409 i~~~n~~~~gl~a~v~t~d~~~~~~~~~--~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
+.+-|+.+-||+++|||+|.+.+.++.. ..++|.|+||-++.. .-.-.|||.|++|.||+.|.+++.+|++..+.++
T Consensus 413 ~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstcti 492 (507)
T KOG2453|consen 413 IAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTI 492 (507)
T ss_pred heeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeee
Confidence 9999999999999999999999999985 458999999986442 2345899999999999999999999999999999
Q ss_pred eCCC
Q 011130 486 ALKN 489 (493)
Q Consensus 486 ~~~~ 489 (493)
++.+
T Consensus 493 nysk 496 (507)
T KOG2453|consen 493 NYSK 496 (507)
T ss_pred eccc
Confidence 8744
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-60 Score=494.43 Aligned_cols=364 Identities=16% Similarity=0.157 Sum_probs=310.5
Q ss_pred cCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHH
Q 011130 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (493)
Q Consensus 99 ~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a 178 (493)
..+.+|+++++++|++||+ .|++++.++|.++|++++++|++++++|++++++|+|||..+.+..+.......+.+++
T Consensus 4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~ 81 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI 81 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999 99999999999999999999999999999999999999987755322233444455454
Q ss_pred HhhHHhcCccCCCCCCceeEEEeeeeeeE---------------------------------------------------
Q 011130 179 GWADKIQGLTAPADGPYHVQTLHEPIGVA--------------------------------------------------- 207 (493)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------------------------------------------- 207 (493)
...+. .+. ...+.+...+..++|+|||
T Consensus 82 ~~~~~-~G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~ 159 (488)
T TIGR02518 82 KDMKT-IGI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE 159 (488)
T ss_pred hhCcc-cce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 42222 232 2223345578899999999
Q ss_pred ------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHH
Q 011130 208 ------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 281 (493)
Q Consensus 208 ------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~ 281 (493)
|++|+|++.+.+.++.|+.||+||+|.||||+.+++.+ .. ++||+++|+|||+|+||++|||+|.|++.
T Consensus 160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~ 234 (488)
T TIGR02518 160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----YS-SGTPAIGVGPGNGPAYIERTANVKKAVRD 234 (488)
T ss_pred HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence 99999998777889999999999999999999976544 33 67999999999999999999999999999
Q ss_pred HHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHH-------HhhcccCCC-CCCCCccccCCCHHHHHHHHHHHHHHH
Q 011130 282 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL-------AMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGV 353 (493)
Q Consensus 282 i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~-------~~~~~vg~p-~~~~~~~gpli~~~~~~~~~~~i~~a~ 353 (493)
++.++|+++||.|++.++||||+++||+|+++|+++ .+.+++|+| +++++++||+++..+++++.++++.++
T Consensus 235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av 314 (488)
T TIGR02518 235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTV 314 (488)
T ss_pred HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcccc
Confidence 999999999999999999999999999999999998 899999996 678899999999999999999999999
Q ss_pred hCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHc----CCCCcEEEEecCCHH
Q 011130 354 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVFTHNLD 429 (493)
Q Consensus 354 ~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v~t~d~~ 429 (493)
.+|+++++||.. .+.+++++ ++|+||||++|++|+|+||||+++|+ ++|||+++|||+|.+
T Consensus 315 ~~gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~ 379 (488)
T TIGR02518 315 PEDAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKD 379 (488)
T ss_pred CCCCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHH
Confidence 999999999852 24567775 79999999999999999999999887 689999999999999
Q ss_pred HHHHHHHhcceeEEEECCcCC---------CCCCCC--ccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 011130 430 TANTLMRALRVGSVWINCFDV---------FDAAIP--FGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 489 (493)
Q Consensus 430 ~~~~~~~~l~~g~V~VN~~~~---------~~~~~p--fGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~ 489 (493)
.+++|++++++|+||||++.. +.+.+- ||+++.++.. .+-+++++++.|+|...++.
T Consensus 380 ~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~~~ 447 (488)
T TIGR02518 380 IVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGVRE 447 (488)
T ss_pred HHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecccc
Confidence 999999999999999996432 223322 5555544444 27788999999999888744
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-59 Score=511.18 Aligned_cols=330 Identities=19% Similarity=0.230 Sum_probs=291.7
Q ss_pred HHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CChhhhh---hccHHHHHH
Q 011130 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE------TWDNG--KPFEQSA---QTEVPMTTR 172 (493)
Q Consensus 104 ~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~------~~e~G--k~~~~a~---~~Ev~~~~~ 172 (493)
++++++++|++||+ .|+++|..+|.++|++++++|+++.++|++++ ++|+| ||+.++. ..|+..+++
T Consensus 295 ~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~ 372 (718)
T PLN02418 295 GAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAA 372 (718)
T ss_pred HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHH
Confidence 59999999999999 99999999999999999999999999999996 77999 8877763 348999999
Q ss_pred HHHHHHHhhHHhcCccCC---CCCCceeEEEeeeeeeE------------------------------------------
Q 011130 173 LFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVA------------------------------------------ 207 (493)
Q Consensus 173 ~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~PlGVv------------------------------------------ 207 (493)
.++|+++. .+..+...+ ...+...++.++|+|||
T Consensus 373 ~~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~ 451 (718)
T PLN02418 373 SIRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHK 451 (718)
T ss_pred HHHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHH
Confidence 99999987 344444333 12234468899999999
Q ss_pred --------e----EEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCH
Q 011130 208 --------G----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 275 (493)
Q Consensus 208 --------g----vv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl 275 (493)
| ++|+|++ +.++++.|..||+|++|+||||+..++.+ ++. ++||+++|||||||+||++|||+
T Consensus 452 l~~eAlP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~i~~~---aa~-~~k~v~lELGGk~p~iV~~DADl 526 (718)
T PLN02418 452 VITDAIPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKLVSQI---KAS-TKIPVLGHADGICHVYVDKSADM 526 (718)
T ss_pred HHHHHccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHHHHHH---HHh-cCCCEEEeCCCcceEEEeCCCCH
Confidence 7 4999997 66789999999999999999999754444 555 78999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhC
Q 011130 276 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 355 (493)
Q Consensus 276 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 355 (493)
|.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|++++++
T Consensus 527 d~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~a~~~ 572 (718)
T PLN02418 527 DMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVALRSA 572 (718)
T ss_pred HHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHHHHHC
Confidence 99999999999999 9999999999999999997 1 258899999999
Q ss_pred CCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHH
Q 011130 356 GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM 435 (493)
Q Consensus 356 ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 435 (493)
|+++ +||.... | +|. + ++|++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.+.+.+++
T Consensus 573 Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a 641 (718)
T PLN02418 573 GVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFL 641 (718)
T ss_pred CCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHH
Confidence 9999 6886432 4 233 3 78999999999999999999999999999999999999999999999999999
Q ss_pred HhcceeEEEECCcCCCCCCCCccCCCCCCC--CCcc--hHHHHHhhhhceEEEEe
Q 011130 436 RALRVGSVWINCFDVFDAAIPFGGYKQSGQ--GREK--GSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 436 ~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~--G~~~--g~~~l~~~~~~k~v~~~ 486 (493)
+++++|.||||+++.+.+..||||+|+||+ |+++ |+++|++|++.|+|++.
T Consensus 642 ~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 642 RQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred HhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 999999999999876677889999999999 9875 99999999999999775
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-59 Score=466.95 Aligned_cols=408 Identities=30% Similarity=0.449 Sum_probs=353.1
Q ss_pred ceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
-.++|+.+. .|+..+++||.+ .+++++|.+++.+|+++|++.|.+++. .|..+|+.+|..+|++++|+++.+..+
T Consensus 116 p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~~ 191 (769)
T COG4230 116 PIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP--IWSATPPAERAAILERAADLMEAQMPQ 191 (769)
T ss_pred cccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 368888774 578889999997 679999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCc-cCCCCCCce-eEEEeeeeeeE-----------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPADGPYH-VQTLHEPIGVA----------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~-~~~~~~PlGVv----------------- 207 (493)
|..++++|.||+...+.. ||.+++++||||+..++.-.+. .....+... +.-+.-|+.+.
T Consensus 192 L~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g~~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAK 270 (769)
T COG4230 192 LMGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFGNLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAK 270 (769)
T ss_pred HHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccCccccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccC
Confidence 999999999999999875 9999999999999988763332 111001100 00111222111
Q ss_pred -----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC--CCceeEecC
Q 011130 208 -----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELG 262 (493)
Q Consensus 208 -----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~--~~pv~lelg 262 (493)
+++++++|.|+++|..|+.+++++.|+||||+++++.|-+..+.++ ..|++.|.|
T Consensus 271 PAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETG 350 (769)
T COG4230 271 PAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETG 350 (769)
T ss_pred ccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccC
Confidence 8899999999999999999999999999999999999998877644 468999999
Q ss_pred CCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHH
Q 011130 263 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 342 (493)
Q Consensus 263 G~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~ 342 (493)
|.|.+||+.+|--++++..++.|+|..+||+|++...+++++++.|..++.|+..+.++++|+|..-.+++||+|+.++.
T Consensus 351 GqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk 430 (769)
T COG4230 351 GQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAK 430 (769)
T ss_pred CcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeC--CHHHHHHHHHcCCCC
Q 011130 343 EKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYG 418 (493)
Q Consensus 343 ~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~g 418 (493)
..++++|+.++..|-.+..- .... .+|.|+.||+++-.. ..-++.|+||||+.|++|+ ++++.|+-+|.++||
T Consensus 431 ~~i~~Hi~~mr~~gr~v~q~-~~~~~~q~GtFv~Ptl~El~~--~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyG 507 (769)
T COG4230 431 ANIEKHIQTMRSKGRLVHQA-AAPNSLQKGTFVAPTLIELEN--LDELQREVFGPVLHVVRYKRDELDEVIDQINATGYG 507 (769)
T ss_pred HHHHHHHHHHHhcccchhhc-cCCCccCCceeeCceeEEcCC--HHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcc
Confidence 99999999988776444322 2222 379999999997543 3346899999999999995 689999999999999
Q ss_pred cEEEEecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEE
Q 011130 419 LAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 483 (493)
Q Consensus 419 l~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v 483 (493)
|+.+|+|+-.+++.++.+++++|++|||.-.. .-.-+||||.|.||.| +.||+.+|..|+..+..
T Consensus 508 LT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 508 LTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred eeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 99999999999999999999999999998543 2345899999999999 78999999999876653
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-59 Score=522.46 Aligned_cols=371 Identities=17% Similarity=0.274 Sum_probs=319.0
Q ss_pred EecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHH
Q 011130 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (493)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~ 176 (493)
....+.+|++++|++|++||+ .|+++|.++|.++|++++++|++++++|++++++|+|||+.+++..++..+...+++
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~ 83 (862)
T PRK13805 6 MAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYN 83 (862)
T ss_pred cCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999 999999999999999999999999999999999999999988764344444444444
Q ss_pred HHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------------------
Q 011130 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------------------- 207 (493)
Q Consensus 177 ~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------------------- 207 (493)
+.. .++..+. .+.+.....+..++|+|||
T Consensus 84 ~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 84 SYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred Hhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 432 1122222 2222344567899999999
Q ss_pred --------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHH
Q 011130 208 --------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 279 (493)
Q Consensus 208 --------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa 279 (493)
|++|+|++.+.+.++.|+.|++||+|+||||+.+++ .++. +++|+++|+|||||+||++|||++.|+
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~~-~~~pv~~e~gGk~p~iV~~dADl~~Aa 236 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVK----AAYS-SGKPALGVGAGNVPAYIDKTADIKRAV 236 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHH----HHHh-cCCCeEEECCCCCeEEEeCCCCHHHHH
Confidence 899999987778899999999999999999999754 3444 789999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEE
Q 011130 280 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 359 (493)
Q Consensus 280 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v 359 (493)
+.|++++|+|+||.|+++++||||++++|+|+++|+++ .+|+++..+++++.++|+++++.|++.
T Consensus 237 ~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~---------------g~~l~~~~~~~~v~~~i~~a~~~~~~~ 301 (862)
T PRK13805 237 NDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH---------------GAYFLNKKELKKLEKFIFGKENGALNA 301 (862)
T ss_pred HHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh---------------CCeeCCHHHHHHHHHHHhhccCCCcCc
Confidence 99999999999999999999999999999999999885 268999999999999999987665543
Q ss_pred -EeCCccc---CCCCceeeceE------EecCCCCccccccccccceEEEEEeCCHHHHHHHHHc----CCCCcEEEEec
Q 011130 360 -ETGGERL---GAKGYYIKPTV------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVFT 425 (493)
Q Consensus 360 -~~gg~~~---~~~g~~~~Ptv------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v~t 425 (493)
++||... ...|+|++|++ +.++.++|++++ |+||||++|++|+|+||||+++|+ ++|||+++|||
T Consensus 302 ~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t 380 (862)
T PRK13805 302 DIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYT 380 (862)
T ss_pred cccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 4466421 12488999987 677889999887 799999999999999999999988 48999999999
Q ss_pred CCHHHHHHHHHhcceeEEEECCcC----------CCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCCCCCC
Q 011130 426 HNLDTANTLMRALRVGSVWINCFD----------VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 493 (493)
Q Consensus 426 ~d~~~~~~~~~~l~~g~V~VN~~~----------~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~~ 493 (493)
+|.+++++|++++++|+||||.+. .+.+.+|||| |.||.|..+|+.++++|++.|+|..+...+-||
T Consensus 381 ~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 381 NDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred CCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 999999999999999999999875 3578899997 999999999999999999999999888777775
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-59 Score=481.55 Aligned_cols=321 Identities=19% Similarity=0.263 Sum_probs=283.3
Q ss_pred HHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHH-HHHHHHHhhHH
Q 011130 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR-LFRYYAGWADK 183 (493)
Q Consensus 105 v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~-~l~~~a~~~~~ 183 (493)
+++|+++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||+.+++..|+..+++ .+++++.. +
T Consensus 1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~ 76 (436)
T cd07122 1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K 76 (436)
T ss_pred ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence 4789999999999 99999999999999999999999999999999999999999887547777777 78888753 2
Q ss_pred hcCccCCCCCCceeEEEeeeeeeE--------------------------------------------------------
Q 011130 184 IQGLTAPADGPYHVQTLHEPIGVA-------------------------------------------------------- 207 (493)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~PlGVv-------------------------------------------------------- 207 (493)
..+.. ........++.++|+|||
T Consensus 77 ~~g~~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P 155 (436)
T cd07122 77 TVGVI-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP 155 (436)
T ss_pred ceeee-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence 22221 222234567899999998
Q ss_pred -eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHH
Q 011130 208 -GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 286 (493)
Q Consensus 208 -gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~ 286 (493)
|++|+|++.+.+.++.|+.||+|++|+||||+++++. ++. +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus 156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~----a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~ 230 (436)
T cd07122 156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKA----AYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK 230 (436)
T ss_pred chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHH----HHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence 8999999877778899999999999999999997653 444 7899999999999999999999999999999999
Q ss_pred HhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhc-------ccCCC-CCCCCccccCCCHHHHHHHHHHHHHHHhCCCE
Q 011130 287 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR-------VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 358 (493)
Q Consensus 287 ~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~-------~vg~p-~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~ 358 (493)
|.|+||.|++++|||||+++||+|+++|+++...+ ++|++ .+.++.+||+++..+++++..++..++..|++
T Consensus 231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~ 310 (436)
T cd07122 231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTK 310 (436)
T ss_pred hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCe
Confidence 99999999999999999999999999999998877 88998 46788899999999988888887777777777
Q ss_pred EEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcC----CCCcEEEEecCCHHHHHHH
Q 011130 359 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHNLDTANTL 434 (493)
Q Consensus 359 v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d~~~~~~~ 434 (493)
+++++ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||+++|||+|.+.++++
T Consensus 311 vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~ 375 (436)
T cd07122 311 VLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEF 375 (436)
T ss_pred EEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHH
Confidence 77555 35777889987 56799999999999999999999997 7999999999999999999
Q ss_pred HHhcceeEEEECCcCC
Q 011130 435 MRALRVGSVWINCFDV 450 (493)
Q Consensus 435 ~~~l~~g~V~VN~~~~ 450 (493)
++++++|+||||+++.
T Consensus 376 ~~~l~aG~V~IN~~~~ 391 (436)
T cd07122 376 ALRMPVSRILVNTPSS 391 (436)
T ss_pred HhhCCceEEEEeCCcc
Confidence 9999999999998765
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-55 Score=445.43 Aligned_cols=310 Identities=51% Similarity=0.804 Sum_probs=288.7
Q ss_pred HHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC
Q 011130 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190 (493)
Q Consensus 111 ~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~ 190 (493)
+|+++++ .|++++.++|.++|+++++.|.++.++|++++++|+|||+.++.. |+..+++.+++++.+.+++.+...+
T Consensus 2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~ 78 (367)
T cd06534 2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELP 78 (367)
T ss_pred hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5788998 999999999999999999999999999999999999999999875 9999999999999988777653222
Q ss_pred -CCCCceeEEEeeeeeeE-----------------------------------------------------eEEEeeeCC
Q 011130 191 -ADGPYHVQTLHEPIGVA-----------------------------------------------------GVLNIVSGY 216 (493)
Q Consensus 191 -~~~~~~~~~~~~PlGVv-----------------------------------------------------gvv~vv~~~ 216 (493)
...+...+..++|+||| |++++++++
T Consensus 79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~ 158 (367)
T cd06534 79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG 158 (367)
T ss_pred ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence 23345678899999998 889999997
Q ss_pred ccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccC
Q 011130 217 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 296 (493)
Q Consensus 217 ~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a 296 (493)
+.+.++.|..|+++|.|.||||+++++.|.+.+++ +++|+++|+||+|++||++|+|++.|++.+++++|.++||.|++
T Consensus 159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 76688999999999999999999999999999988 78999999999999999999999999999999999999999999
Q ss_pred CCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeece
Q 011130 297 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 376 (493)
Q Consensus 297 ~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Pt 376 (493)
+++||||++++|+|+++|+ |
T Consensus 238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t 257 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T 257 (367)
T ss_pred CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence 9999999999999999987 6
Q ss_pred EEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCC
Q 011130 377 VFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAI 455 (493)
Q Consensus 377 vl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~ 455 (493)
|+.+++++++++++|+||||++|++|++++|+|+++|+.++||+++|||+|.+.+++++..+++|+|+||+++.. .+.+
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~ 337 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEA 337 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 667778889999999999999999999999999999999999999999999999999999999999999998877 7889
Q ss_pred CccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 456 PFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 456 pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
||||.|+||+|+++|++++++|++.|+++
T Consensus 338 pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 338 PFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 99999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-55 Score=453.99 Aligned_cols=322 Identities=19% Similarity=0.179 Sum_probs=284.7
Q ss_pred HHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhh----------hccHHHHHHHHHHHHH
Q 011130 110 SAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA----------QTEVPMTTRLFRYYAG 179 (493)
Q Consensus 110 ~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~----------~~Ev~~~~~~l~~~a~ 179 (493)
++|++||+ .|+++|..+|.++|++++++|++++++|+++++.|+|||+.+.. ..|+..+++.+++++.
T Consensus 1 ~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~ 78 (397)
T cd07077 1 ESAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITA 78 (397)
T ss_pred ChHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 36889999 99999999999999999999999999999999999999965432 1278889999999987
Q ss_pred hhHHhcCccCCCCCCceeEEEeeeeeeE----------------------------------------------------
Q 011130 180 WADKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------------------------- 207 (493)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~PlGVv---------------------------------------------------- 207 (493)
...+..+...+. ....++.++|+|||
T Consensus 79 ~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 79 SVGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred hcCcccceEecC--CCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 655554433332 23568899999998
Q ss_pred ---eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHH
Q 011130 208 ---GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 284 (493)
Q Consensus 208 ---gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~ 284 (493)
|++++|++.+.+.+..|+.||++|+|+||||+++++.+.+.+. .+|+++|+||++|+||++|||++.|++.+++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence 7899999867778899999999999999999999999988663 4899999999999999999999999999999
Q ss_pred HHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCc
Q 011130 285 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 364 (493)
Q Consensus 285 ~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~ 364 (493)
++|+| ||.|+++++||||+++||+|+++|++++.. .|++++.||+
T Consensus 234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~ 278 (397)
T cd07077 234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK 278 (397)
T ss_pred hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce
Confidence 99999 999999999999999999999999997753 4677777663
Q ss_pred ccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHH----HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcce
Q 011130 365 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD----EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 440 (493)
Q Consensus 365 ~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 440 (493)
++|+.|| ++|.++++|+||||++|++|+|++ +|++++|+++|||+++|||+|.+.+.++++++++
T Consensus 279 -----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~ 347 (397)
T cd07077 279 -----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDT 347 (397)
T ss_pred -----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCE
Confidence 4677776 688999999999999999999996 6667889999999999999999999999999999
Q ss_pred eEEEECCcCCCC--CCCCccCCC--CCCCCCcch-HHHHHhhhhceEEE
Q 011130 441 GSVWINCFDVFD--AAIPFGGYK--QSGQGREKG-SYSLSNYLQVKAVV 484 (493)
Q Consensus 441 g~V~VN~~~~~~--~~~pfGG~~--~SG~G~~~g-~~~l~~~~~~k~v~ 484 (493)
|.|+||+..... +.+||||.+ .||+|+++| .+++++|++.|+++
T Consensus 348 G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 348 ASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 999999876544 678999999 899999999 99999999999986
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-54 Score=473.16 Aligned_cols=329 Identities=18% Similarity=0.194 Sum_probs=278.7
Q ss_pred HHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhc---------------cHH
Q 011130 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT---------------EVP 168 (493)
Q Consensus 104 ~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~---------------Ev~ 168 (493)
+++..+++|++||+ .|+.+|.++|.++|++++++|++|.++|+ .++||++.+++.. |+.
T Consensus 287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~ 360 (715)
T TIGR01092 287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS 360 (715)
T ss_pred HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence 38888999999999 99999999999999999999999999997 5888888776531 366
Q ss_pred HHHHHHHHHHHhhHHhcCccCC---CCCCceeEEEeeeeeeE--------------------------------------
Q 011130 169 MTTRLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVA-------------------------------------- 207 (493)
Q Consensus 169 ~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~PlGVv-------------------------------------- 207 (493)
.++..++++++. .+..+...+ ...+...+..++|+|||
T Consensus 361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 778888888873 333333222 11233457889999999
Q ss_pred ------------e----EEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ------------G----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ------------g----vv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
| ++++|++ +.++++.|..|++||+|+||||+.+|+.|++.++ +|+++|+|||||+||++
T Consensus 440 ~l~~l~~~alp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~iV~~ 514 (715)
T TIGR01092 440 ILHKVITEAIPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVYVDK 514 (715)
T ss_pred HHHHHHHHHcCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEEECC
Confidence 4 7899985 5677888999999999999999999999998763 89999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
|||++.|++.++.+.|.+ ||.|++++|||||++++|+ | .+.+++++
T Consensus 515 dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~ 560 (715)
T TIGR01092 515 SASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDM 560 (715)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHHH
Confidence 999999987777776555 9999999999999999985 0 25677788
Q ss_pred HHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 011130 352 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431 (493)
Q Consensus 352 a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 431 (493)
++++|++++ ||.... .|+. ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+
T Consensus 561 ~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a 631 (715)
T TIGR01092 561 LRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVA 631 (715)
T ss_pred HHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHH
Confidence 888999985 775422 2332 1356899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCC----cchHHHHHhhhhceEEEEeC
Q 011130 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR----EKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 432 ~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~----~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|++++++|.||||+++...+..||||+|+||+|+ ++|++++++|++.|+|++..
T Consensus 632 ~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 632 EFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred HHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 999999999999999876666788999999999995 48999999999999998763
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-54 Score=443.65 Aligned_cols=323 Identities=19% Similarity=0.174 Sum_probs=272.5
Q ss_pred HHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCh------hhhhhccHHHHHHHHHHHHH
Q 011130 112 ARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL------ETWDNGKPF------EQSAQTEVPMTTRLFRYYAG 179 (493)
Q Consensus 112 A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~------~~~e~Gk~~------~~a~~~Ev~~~~~~l~~~a~ 179 (493)
|++||+ .|+++|..+|.++|++++++|++|.++|+++ +++|+|||. .++. .|+..+++.++|+++
T Consensus 1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~ 77 (398)
T TIGR00407 1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIE 77 (398)
T ss_pred ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhc
Confidence 577888 8999999999999999999999999999999 999999994 2344 489999999999998
Q ss_pred hhHHhcCccCCC---CCCceeEEEeeeeeeE-------------------------------------------------
Q 011130 180 WADKIQGLTAPA---DGPYHVQTLHEPIGVA------------------------------------------------- 207 (493)
Q Consensus 180 ~~~~~~~~~~~~---~~~~~~~~~~~PlGVv------------------------------------------------- 207 (493)
.++.. +...+. ..+...++.++|+|||
T Consensus 78 ~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~ 156 (398)
T TIGR00407 78 LADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALA 156 (398)
T ss_pred CCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHH
Confidence 88654 443332 2345678899999999
Q ss_pred ------eEEEeeeCCc-cchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHH
Q 011130 208 ------GVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 280 (493)
Q Consensus 208 ------gvv~vv~~~~-~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~ 280 (493)
|++|+|++.+ .++++.|..||+||+|+||||+.+|+.+++. ..+|+++|+|||||+||++|||+|.|++
T Consensus 157 eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa~ 232 (398)
T TIGR00407 157 QTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAIK 232 (398)
T ss_pred HcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHHH
Confidence 8999999754 4578899999999999999999999988764 4579999999999999999999999999
Q ss_pred HHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEE
Q 011130 281 LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 360 (493)
Q Consensus 281 ~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~ 360 (493)
.+++++|.+ ||.|++++|+|||+++||+|+++|++++.++++ .+++ .+.+.+++.. |
T Consensus 233 ~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g---- 289 (398)
T TIGR00407 233 VIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----G---- 289 (398)
T ss_pred HHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c----
Confidence 999999965 999999999999999999999999999987643 1221 1233333321 1
Q ss_pred eCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcce
Q 011130 361 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 440 (493)
Q Consensus 361 ~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 440 (493)
| ||++ + .+|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++
T Consensus 290 --~-----------~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~ 353 (398)
T TIGR00407 290 --P-----------ATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDS 353 (398)
T ss_pred --C-----------cccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCe
Confidence 1 3444 2 2378999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEECCcCCCCCCCCccCCCCCC----CCCcchHHHHHhhhhce
Q 011130 441 GSVWINCFDVFDAAIPFGGYKQSG----QGREKGSYSLSNYLQVK 481 (493)
Q Consensus 441 g~V~VN~~~~~~~~~pfGG~~~SG----~G~~~g~~~l~~~~~~k 481 (493)
|.|+||+++.+.+..|||=-.+-| ..+..|+.+++.|+..|
T Consensus 354 G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 354 AAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred eEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 999999988888888998333323 35677999999998876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=239.26 Aligned_cols=334 Identities=20% Similarity=0.248 Sum_probs=257.4
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------cCCChhhhhhccHHHHHHHHHH
Q 011130 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWD------NGKPFEQSAQTEVPMTTRLFRY 176 (493)
Q Consensus 103 ~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e------~Gk~~~~a~~~Ev~~~~~~l~~ 176 (493)
.++....++||+|.. .+..++..+|.+.|.++++.|+++.++|.++..+| +|.+ ++..+.+...-..++.
T Consensus 3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~--~~m~DRL~L~~~Ri~~ 78 (417)
T COG0014 3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLS--EAMLDRLALTPSRIEA 78 (417)
T ss_pred hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCc--HHHHHHHcCCHHHHHH
Confidence 457788899999998 89999999999999999999999999999988765 4443 2222223333333333
Q ss_pred HHHhhHHhcCccCC---------CCCCceeEEEeeeeeeE----------------------------------------
Q 011130 177 YAGWADKIQGLTAP---------ADGPYHVQTLHEPIGVA---------------------------------------- 207 (493)
Q Consensus 177 ~a~~~~~~~~~~~~---------~~~~~~~~~~~~PlGVv---------------------------------------- 207 (493)
.+.-.+++.....| .+.+...+..+.|+||+
T Consensus 79 ma~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai 158 (417)
T COG0014 79 MADGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAI 158 (417)
T ss_pred HHHHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHH
Confidence 33333333222222 23466788999999998
Q ss_pred ---------------eEEEeeeCCc-cchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ---------------GVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ---------------gvv~vv~~~~-~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
+.+++|+..+ .++.+.|..+..||+|+-.||....+.|.+.+. .||+-.+-|+|.++|+.
T Consensus 159 ~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~----vPVi~~~~G~CHiyvd~ 234 (417)
T COG0014 159 VEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT----VPVIEHGVGNCHIYVDE 234 (417)
T ss_pred HHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc----CCEEecCcceEEEEecc
Confidence 5678888654 345666777788999999999998888877543 58888888999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~ 351 (493)
+||+|.|.+.++.++....+ .|++.+.++||+.+.++|+.+|.+.+...
T Consensus 235 ~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~------------------------------ 283 (417)
T COG0014 235 SADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA------------------------------ 283 (417)
T ss_pred cCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc------------------------------
Confidence 99999999999999999998 99999999999999999999998877632
Q ss_pred HHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 011130 352 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431 (493)
Q Consensus 352 a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 431 (493)
|.++....... -+-|.. ..+....-+..|..-+++.|..+++++|||++||..+.+|+-+|.|+|.+.+
T Consensus 284 ----gvelr~d~~~~-----~~~~~~--~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a 352 (417)
T COG0014 284 ----GVELRGDAEAL-----ALLPDA--VKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANA 352 (417)
T ss_pred ----CeEEEcCHHHH-----Hhcccc--CCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHH
Confidence 22222111100 000000 0122233467899999999999999999999999999999999999999999
Q ss_pred HHHHHhcceeEEEECCcCCCCCCCCccCCCCCC----CCCcchHHHHHhhhhceEEEEe
Q 011130 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG----QGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 432 ~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG----~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
++|...+++..||||.++.|..+.-||=-.+-| ..+..|+-||+.+|..|+++..
T Consensus 353 ~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G 411 (417)
T COG0014 353 ERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG 411 (417)
T ss_pred HHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence 999999999999999999998777775333333 4578899999999999998764
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-23 Score=193.37 Aligned_cols=329 Identities=19% Similarity=0.228 Sum_probs=247.1
Q ss_pred HHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH------HcCCChhhhhhccHHHHHHHHHHHH
Q 011130 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYA 178 (493)
Q Consensus 105 v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~------e~Gk~~~~a~~~Ev~~~~~~l~~~a 178 (493)
+++..+.||++++ .++.++.++|.++|.+++++|..+..+|.++... +.|.. +.....+...-..+..++
T Consensus 2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~--~sll~RL~l~~~K~~sl~ 77 (433)
T KOG4165|consen 2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLA--ESLLKRLDLSPGKISSLA 77 (433)
T ss_pred HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCcc--HHHHHHhcCChHHHHHHH
Confidence 3556788999998 8999999999999999999999988888776544 45532 221112222222333333
Q ss_pred HhhHHhcCccCC---------CCCCceeEEEeeeeeeE------------------------------------------
Q 011130 179 GWADKIQGLTAP---------ADGPYHVQTLHEPIGVA------------------------------------------ 207 (493)
Q Consensus 179 ~~~~~~~~~~~~---------~~~~~~~~~~~~PlGVv------------------------------------------ 207 (493)
.-.+++.....| ...+...+....|+||.
T Consensus 78 ~g~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~ 157 (433)
T KOG4165|consen 78 AGLRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHK 157 (433)
T ss_pred HHHHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence 222222221111 22344556677899986
Q ss_pred -------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCC
Q 011130 208 -------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 274 (493)
Q Consensus 208 -------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daD 274 (493)
+.+++|+. ..++.+.|..+..||+|.-.||....+.|... +.+||..+-.|.+.++|++|||
T Consensus 158 ~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~dad 232 (433)
T KOG4165|consen 158 LVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDAD 232 (433)
T ss_pred HHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEeccccC
Confidence 46788876 57788888888899999999999999988664 4489999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCcccCCCeeEecchh-HHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHH
Q 011130 275 VDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 353 (493)
Q Consensus 275 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 353 (493)
+++|.+.+..+++.+.. .|++.+.+++|++. ...|++.|...+.
T Consensus 233 ~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~---------------------------------- 277 (433)
T KOG4165|consen 233 LDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK---------------------------------- 277 (433)
T ss_pred HHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH----------------------------------
Confidence 99999999999998886 89999999999984 3455555544332
Q ss_pred hCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHH
Q 011130 354 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 433 (493)
Q Consensus 354 ~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 433 (493)
++|.++.+|.+ ......| .++...-++.|.-.-.+++-.+++.++||+.||..+.+++-+|.|+|.+.+++
T Consensus 278 ~~gVtl~agpk-l~~~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~ 348 (433)
T KOG4165|consen 278 EEGVTLHAGPK-LAALLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEH 348 (433)
T ss_pred hcCeEEecChh-HHhhcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHH
Confidence 34555554432 2111111 14455667888888889999999999999999999999999999999999999
Q ss_pred HHHhcceeEEEECCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEe
Q 011130 434 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 434 ~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~ 486 (493)
|.+.+++..||.|..+.|..++-||--.+-|+. +..|+.|++-.+..||+...
T Consensus 349 Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 349 FLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred HHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 999999999999999999999989755555653 46699999999889987654
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-19 Score=187.34 Aligned_cols=310 Identities=16% Similarity=0.114 Sum_probs=200.6
Q ss_pred CHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHH-
Q 011130 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE----RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR- 175 (493)
Q Consensus 101 ~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~----~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~- 175 (493)
+..++++.++..+...+ ....++.++..+++.++++.+. ..+.+..+.+..-+|.+...... .+......|+
T Consensus 3 ~~~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~-a~~~l~~~~~r 79 (422)
T cd07080 3 SAPDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLRE-GLKRLMALFRR 79 (422)
T ss_pred CHHHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHH-HHHHHHHHcCH
Confidence 34455666665555444 5567788888888888887775 34556666667777777544332 3333333332
Q ss_pred -HHHHhhHHhcCccCCCC----CCceeEEEeeeeeeE-------------------------------------------
Q 011130 176 -YYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVA------------------------------------------- 207 (493)
Q Consensus 176 -~~a~~~~~~~~~~~~~~----~~~~~~~~~~PlGVv------------------------------------------- 207 (493)
.+.....+..+.....+ .+...++.++|+|||
T Consensus 80 ~~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~ 159 (422)
T cd07080 80 ENLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR 159 (422)
T ss_pred HHHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence 11111111111000001 133557888999998
Q ss_pred ------------eEEEee--eCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCC-CceEEccC
Q 011130 208 ------------GVLNIV--SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK-SPFIVCED 272 (493)
Q Consensus 208 ------------gvv~vv--~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~-~p~iV~~d 272 (493)
+.++++ +|.+.++++.|..++ |.|+||||+++++.|++.++. + +.++|+||| +++|+.++
T Consensus 160 ~l~~~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~ 234 (422)
T cd07080 160 SLADVDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDRE 234 (422)
T ss_pred HHHhcCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecHH
Confidence 345676 454555788898887 999999999999999998875 4 569999999 55555666
Q ss_pred C----CHHHHHHHHHHHHHhhcCCcccCCCeeEecchh---HHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHH
Q 011130 273 A----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV---YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 345 (493)
Q Consensus 273 a----Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i---~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~ 345 (493)
+ |++.+++.++.+.|.++||.|+|+++||||+++ +++|.++|.++++++.-..|. +++ +.....++
T Consensus 235 a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~------~~~-~~~~~~~~ 307 (422)
T cd07080 235 ALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPA------LSL-SAAESAKI 307 (422)
T ss_pred hhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCC------CCC-CHHHHHHH
Confidence 8 999999999999999999999999999999999 999999999999887543332 111 33333333
Q ss_pred HHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEec
Q 011130 346 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425 (493)
Q Consensus 346 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 425 (493)
...=..+...+.+... ..+.+ -+|+...... + ..-..+=.+.|+++++++|++..++. |=-|+++|.
T Consensus 308 ~~~r~~~~~~~~~~~~----~~~~~----~~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~ 374 (422)
T cd07080 308 ARARLEAEFYELKGGV----SRDLG----WTVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAP 374 (422)
T ss_pred HHHHHHHHHHHHhcCC----CCCCC----eEEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeec
Confidence 3322222112211111 11122 2333322211 1 11456677889999999999999986 556999999
Q ss_pred CCHHHHHHHHHhcc
Q 011130 426 HNLDTANTLMRALR 439 (493)
Q Consensus 426 ~d~~~~~~~~~~l~ 439 (493)
.+.+. .++++.+.
T Consensus 375 ~~~~~-~~~~~~l~ 387 (422)
T cd07080 375 SPAEL-AELADALA 387 (422)
T ss_pred ChhhH-HHHHHHHH
Confidence 88876 67777774
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=7e-14 Score=116.66 Aligned_cols=145 Identities=27% Similarity=0.284 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHH-hCCCEEEeCCcccCCCCceeeceEEecCCCCc
Q 011130 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 385 (493)
Q Consensus 307 ~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~-~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 385 (493)
...+.+.|++..+.+++-+-..++++. .+..+++.++|+.-. -.|-.+..-|. ..|+|+.||+|. +.|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 356677788888888888777777776 455566666666410 01222222222 368899999998 99999
Q ss_pred cccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCc-CCCCCCCCccCC
Q 011130 386 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGY 460 (493)
Q Consensus 386 ~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~-~~~~~~~pfGG~ 460 (493)
.++.||+||||+....-.+++|+|..+|+++||....|||.+.+.++.++...++|.|.+|.+ |.--+.+-|-|-
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~ 154 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGD 154 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceecccc
Confidence 999999999999999999999999999999999999999999999999999999999999975 333344445543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.3e-11 Score=109.14 Aligned_cols=202 Identities=19% Similarity=0.213 Sum_probs=143.7
Q ss_pred CceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHH
Q 011130 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 344 (493)
Q Consensus 265 ~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 344 (493)
.-+||++|+|++.|+..++.++-..-| ..+.-.|+|||++.|+|+++++.+++.+ ++. +.+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~-----va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQ-----VANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chh-----hccCcHHHH
Confidence 348999999999999999999865544 4678899999999999999999988754 222 223345666
Q ss_pred HHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcC--CCCcEEE
Q 011130 345 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS--QYGLAAG 422 (493)
Q Consensus 345 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gl~a~ 422 (493)
..+.|+ .-+++++.+..... -..-.|.++.+.+... +.. -..+|+++..|++..||+++.+.- +|+ +.+
T Consensus 73 sl~~i~---~l~~~~I~~~~~~~--~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVs 143 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFENV--PPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVS 143 (215)
T ss_pred HHHHHH---hcCCeEEEecccCC--CCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEE
Confidence 666655 46899998843211 1223599998876542 222 455899999999999999999974 444 999
Q ss_pred EecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcch--HHHHHhhhhceEEEEeCC
Q 011130 423 VFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKG--SYSLSNYLQVKAVVTALK 488 (493)
Q Consensus 423 v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g--~~~l~~~~~~k~v~~~~~ 488 (493)
||++-.+.+-+++.+|++..+||||... ..|-.++-..+..-.--..| .+.+...-+.|.|+.+..
T Consensus 144 iW~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~~~~~~~~v~i~~gyHYE~l~~~~~~k~IVFP~~ 212 (215)
T PF07368_consen 144 IWNEKLASAYELAARLPCDTFYINCFNVDLSPIMPFFAARKNDVLIANGYHYETLTIGGKRKIIVFPIG 212 (215)
T ss_pred EeCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhhhhcCCceEEEECCeeEEEEEECCeEEEEEEecc
Confidence 9999999999999999999999999754 34555554433221111111 124445556777776653
|
The function of this family is unknown. |
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.3e-07 Score=94.45 Aligned_cols=232 Identities=17% Similarity=0.215 Sum_probs=141.6
Q ss_pred ccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccC
Q 011130 217 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 296 (493)
Q Consensus 217 ~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a 296 (493)
+.++.+.+.. ..|.++.+||.++.+.+.+... ..++.+....-.+-.+|..+++++.+++.+..-.+....|.|.|
T Consensus 158 d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsS 233 (399)
T PF05893_consen 158 DEELEEALSQ--QADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSS 233 (399)
T ss_pred chHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCC
Confidence 4455565653 5799999999999999988443 23445555556677888888899999999999999999999999
Q ss_pred CCeeEecc---hhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHH-----HHHHHhCCCEEEeCCcccCC
Q 011130 297 GSRTFVHE---SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY-----IRSGVDGGAKLETGGERLGA 368 (493)
Q Consensus 297 ~~~v~V~~---~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~-----i~~a~~~ga~v~~gg~~~~~ 368 (493)
++.|||.. .-.++|.++|.+.+.+..---|.. ..+......+... +..+...+.++..+..
T Consensus 234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---- 302 (399)
T PF05893_consen 234 PQVIFVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSDD---- 302 (399)
T ss_pred CeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCC----
Confidence 99999993 335788888877766532111111 1122222222222 2234344444542221
Q ss_pred CCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc-ceeEEEECC
Q 011130 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 447 (493)
Q Consensus 369 ~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~V~VN~ 447 (493)
. .-||+....+ ......++=++.|+++++++|++..++....=-|++++... .....+++.+ ..|.--|
T Consensus 303 ~----~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri-- 372 (399)
T PF05893_consen 303 N----SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI-- 372 (399)
T ss_pred C----CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee--
Confidence 1 1344433221 22334456688999999999999999987541388887654 4455666533 4442222
Q ss_pred cCCCCCCCCccCCCCCCCC-CcchHHHHHhhhhc
Q 011130 448 FDVFDAAIPFGGYKQSGQG-REKGSYSLSNYLQV 480 (493)
Q Consensus 448 ~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~ 480 (493)
.|.|-.-.--.| ..-|.+.|..|+++
T Consensus 373 -------v~~G~m~~~~~g~~hDG~~~L~~lvRw 399 (399)
T PF05893_consen 373 -------VPLGQMLDFDPGWPHDGMYPLRRLVRW 399 (399)
T ss_pred -------CCCCcCCCCCCCCCcCCHhHHHHHhCC
Confidence 223222111112 34477888887763
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.46 E-value=7.9 Score=39.79 Aligned_cols=81 Identities=22% Similarity=0.274 Sum_probs=52.0
Q ss_pred EEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc-ceeEEEECCcCCCC--CC--CCccCCCCCCCCCcchHH
Q 011130 398 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVFD--AA--IPFGGYKQSGQGREKGSY 472 (493)
Q Consensus 398 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~V~VN~~~~~~--~~--~pfGG~~~SG~G~~~g~~ 472 (493)
.|+.++|++|+++++|...- -..-|.++|+. .+..++ ++|.|+++.+.... .+ -|-.=.+.+|.-|..+.-
T Consensus 300 ~iilv~~l~ea~~~~N~~AP-EHLei~~~~p~---~~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT~g~AR~~s~L 375 (425)
T COG0141 300 AIILVDDLDEAVEISNEYAP-EHLELQTENPR---ELLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPTSGTARFSSGL 375 (425)
T ss_pred eEEEECCHHHHHHHHHhhCh-HhhhhhhcCHH---HHHHHhcccceeeecCCCCccccccccCCCccCCCCccchhcCCc
Confidence 56678999999999998532 35678888875 455555 69999999864421 11 011112345555666666
Q ss_pred HHHhhhhceE
Q 011130 473 SLSNYLQVKA 482 (493)
Q Consensus 473 ~l~~~~~~k~ 482 (493)
+...|++.-+
T Consensus 376 ~v~dF~K~~t 385 (425)
T COG0141 376 SVYDFLKRST 385 (425)
T ss_pred cHHHhhhHHH
Confidence 7777766543
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=89.33 E-value=29 Score=35.91 Aligned_cols=83 Identities=19% Similarity=0.282 Sum_probs=47.4
Q ss_pred EEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc-ceeEEEECCcCCC---C-CCCCccCCCCCCCCCcchHH
Q 011130 398 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF---D-AAIPFGGYKQSGQGREKGSY 472 (493)
Q Consensus 398 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~V~VN~~~~~---~-~~~pfGG~~~SG~G~~~g~~ 472 (493)
.++.++|++|+++++|..-- -...|.++|+. .+..++ .+|.|+++.+... + ..-|-.=.+.+|..|..|.-
T Consensus 290 ~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgL 365 (412)
T PF00815_consen 290 AIIVVDSLEEAIELANEYAP-EHLELQVEDPE---ELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTGGTARFSSGL 365 (412)
T ss_dssp EEEE-SSHHHHHHHHHHH---SEEEEESTTHH---HHGGG--S-SEEEESTT--HHHHHHTSSS------TTGGGT---S
T ss_pred eEEEECCHHHHHHHHHHhhH-HHHHHHHcCHH---HHHHHhhccChhhcCCCCCHHHhhhccCCCccCCCCccccccCCC
Confidence 56778999999999998422 36788898874 556666 6999999976431 1 00011112344566777777
Q ss_pred HHHhhhhceEEE
Q 011130 473 SLSNYLQVKAVV 484 (493)
Q Consensus 473 ~l~~~~~~k~v~ 484 (493)
+...|++.-++.
T Consensus 366 sv~~FlK~~s~~ 377 (412)
T PF00815_consen 366 SVDDFLKRISVQ 377 (412)
T ss_dssp -GGGGEEEEEEE
T ss_pred cHHHccceeeEE
Confidence 888888876653
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=83.07 E-value=60 Score=33.41 Aligned_cols=83 Identities=22% Similarity=0.268 Sum_probs=54.7
Q ss_pred EEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc-ceeEEEECCcCC--CCCCC--CccCCCCCCCCCcchHH
Q 011130 398 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDV--FDAAI--PFGGYKQSGQGREKGSY 472 (493)
Q Consensus 398 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~V~VN~~~~--~~~~~--pfGG~~~SG~G~~~g~~ 472 (493)
.++.++|++|+++++|..-- -..-|.++|.. .+..++ .+|.|++..+.. +..++ |-.=.+.+|.+|..+.-
T Consensus 273 ~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT~G~Ar~~sgL 348 (393)
T TIGR00069 273 AIILVDDLEEAIEISNDYAP-EHLELQTKNPE---ELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPTGGTARFYSGL 348 (393)
T ss_pred EEEEECCHHHHHHHHHhhCh-HhheehhCCHH---HHHhhcCccceeccCCCCchhhhhccCCCCcccCCCcceeecCCc
Confidence 35678999999999998532 24567888874 455555 699999987643 11111 11113345667777777
Q ss_pred HHHhhhhceEEE
Q 011130 473 SLSNYLQVKAVV 484 (493)
Q Consensus 473 ~l~~~~~~k~v~ 484 (493)
+.+.|++.-++.
T Consensus 349 ~v~~F~K~~s~~ 360 (393)
T TIGR00069 349 SVLDFLKRITVQ 360 (393)
T ss_pred cHHHhccceeEE
Confidence 888888776653
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 493 | ||||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-137 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-135 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-135 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-134 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-134 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-134 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-133 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-133 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-132 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-132 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-128 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-125 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-122 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 4e-94 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 9e-94 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-93 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 6e-93 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 7e-93 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 3e-92 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 9e-89 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 1e-88 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-88 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-87 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-87 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-82 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 5e-76 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 3e-75 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 1e-73 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-73 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-71 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 7e-70 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 4e-69 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 6e-69 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-67 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 3e-67 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-63 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-63 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-63 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 4e-62 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 4e-58 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 8e-58 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 9e-55 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 6e-54 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 8e-53 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 2e-52 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-50 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-50 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 3e-49 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-47 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 1e-46 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 2e-46 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-46 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-45 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-45 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-40 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 3e-39 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 5e-39 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 8e-39 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-38 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-37 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 7e-36 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-35 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 2e-35 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 4e-35 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 4e-35 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-34 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-34 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-34 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 5e-33 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 8e-33 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 1e-32 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 1e-32 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 5e-30 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 6e-30 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 2e-29 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-28 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 3e-28 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-25 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-24 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-22 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 2e-21 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 4e-17 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 4e-17 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 9e-17 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-16 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 4e-07 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 4e-07 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 4e-07 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 4e-07 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 7e-06 |
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 743 bits (1921), Expect = 0.0
Identities = 249/495 (50%), Positives = 311/495 (62%), Gaps = 57/495 (11%)
Query: 50 AAAAEDPITPPVK---VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
+AAA + P + V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV+
Sbjct: 1 SAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVD 60
Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+AV AAR AF G PW RM A R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 61 KAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLV 120
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGV------------------- 206
++ M + RYYAGWADK G T P DG + T HEP+GV
Sbjct: 121 DLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180
Query: 207 ----------------------------------AGVLNIVSGYGPTAGAALASHMEVDK 232
GV+NIV G+GPTAGAA+ASH +VDK
Sbjct: 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDK 240
Query: 233 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 292
+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQ
Sbjct: 241 VAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 300
Query: 293 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 352
C CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G
Sbjct: 301 CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTG 360
Query: 353 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 412
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+
Sbjct: 361 KQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRA 420
Query: 413 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 472
N S YGLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y
Sbjct: 421 NNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEY 480
Query: 473 SLSNYLQVKAVVTAL 487
L Y +VK V +
Sbjct: 481 GLQAYTEVKTVTVKV 495
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 743 bits (1920), Expect = 0.0
Identities = 232/499 (46%), Positives = 304/499 (60%), Gaps = 56/499 (11%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
SS+A ++ YT++ IN ++ S SGK FP +P T + + V EG+ EDV+
Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61
Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+AV AAR+AF G PW M A ER +++ + ADL+ER +A +E + GK F +
Sbjct: 62 KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGV------------------- 206
++ + RY AGWADKIQG T P DG + T EP+GV
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181
Query: 207 ----------------------------------AGVLNIVSGYGPTAGAALASHMEVDK 232
GV+NIV GYGPTAGAA++SHM+VDK
Sbjct: 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDK 241
Query: 233 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 292
+AFTGST GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQ
Sbjct: 242 VAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301
Query: 293 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 352
CC A SR FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG
Sbjct: 302 CCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESG 361
Query: 353 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 412
GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+
Sbjct: 362 KKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRA 421
Query: 413 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSY 472
N + YGL+AG+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y
Sbjct: 422 NNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEY 481
Query: 473 SLSNYLQVKAVVTAL--KN 489
Y +VK V + KN
Sbjct: 482 GFHEYTEVKTVTIKISQKN 500
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 727 bits (1880), Expect = 0.0
Identities = 178/502 (35%), Positives = 276/502 (54%), Gaps = 62/502 (12%)
Query: 44 STASSAAAAAEDPITPPVKVDY---TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
+ K+ QL I G+FVD+ KT+ T++P G VI V+
Sbjct: 12 GEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLA 71
Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
+ DV++AV+AA++AF+ G W ++ A +R +++ R AD++E+H +E+A +E D G +
Sbjct: 72 QVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYT 131
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP----YHVQTLHEPIGV---------- 206
+ +T V M+ + FRY+AGW DKIQG T P + T EP+GV
Sbjct: 132 LALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYP 191
Query: 207 -------------------------------------------AGVLNIVSGYGPTAGAA 223
GV+NI+ G G G
Sbjct: 192 LMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQR 251
Query: 224 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 283
L+ H +V K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++
Sbjct: 252 LSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGM 311
Query: 284 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 343
++FFN+G+ C A R FV ES+++QFV+K K +G+P + GPQ
Sbjct: 312 SSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLR 371
Query: 344 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403
K+++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 372 KLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431
Query: 404 --DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 461
D+D V+ R+NA+++GLA+GVFT +++ A + L+ G+V+IN ++ D A PFGG+K
Sbjct: 432 DGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFK 491
Query: 462 QSGQGREKGSYSLSNYLQVKAV 483
QSG G++ G +L+ YL++K V
Sbjct: 492 QSGFGKDLGEAALNEYLRIKTV 513
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 714 bits (1845), Expect = 0.0
Identities = 159/506 (31%), Positives = 242/506 (47%), Gaps = 60/506 (11%)
Query: 45 TASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAED 104
+ + +K + I+G++V+SA+ T ++P +VI V+EG ED
Sbjct: 12 DLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKED 71
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
RA+ AAR+AF+ G W + TA R K + AD ++ H + +A LET D GK E+ +
Sbjct: 72 AERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEE-SY 130
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGV----------------- 206
++ +F Y+AG ADK G + P + + EP+GV
Sbjct: 131 ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190
Query: 207 ------------------------------------AGVLNIVSGYGPTAGAALASHMEV 230
G +N++ G G G ++ H EV
Sbjct: 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
D ++FTG TGK +++ AA +N+ + LELGGK+P I+ +DAD + A + A +F+
Sbjct: 251 DLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHA 309
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350
GQ C AGSR V S+ D+F + K +G+ F + GP I +E KI Y+
Sbjct: 310 GQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMD 369
Query: 351 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406
GA + GG+R G + +PTV T M I ++E+FGPV ++ ++
Sbjct: 370 VAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQ 429
Query: 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 466
E IQ +N S YGLA VF+ ++ A + L++G+VWIN F + A P+GGYKQSG G
Sbjct: 430 EAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIG 489
Query: 467 REKGSYSLSNYLQVKAVVTALKNPAW 492
RE G L YL K ++T
Sbjct: 490 RELGKEGLEEYLVSKHILTNTNPQLV 515
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 712 bits (1841), Expect = 0.0
Identities = 190/506 (37%), Positives = 263/506 (51%), Gaps = 60/506 (11%)
Query: 46 ASSAAAAAEDPITPPVKVD-YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAE 103
+ A D P +++ Q+L++G+ VD+ASG T + P G+V+ E A+
Sbjct: 2 VMLSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASAD 61
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV +AV+AARKAFD GPWPRM+ ERS+++ + ADL+ +E+A +E+ + GKP Q A
Sbjct: 62 DVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQ-A 120
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGV---------------- 206
+ E+ L+ Y AG A ++G T G L EP+GV
Sbjct: 121 RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180
Query: 207 -------------------------------------AGVLNIVSGYGPTAGAALASHME 229
GV N+V+GYG AG LA
Sbjct: 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPN 240
Query: 230 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 289
VD +AFTGS G + ++AA+ +K V LELGGK P IV DAD+D AA+ Y ++ N
Sbjct: 241 VDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHN 299
Query: 290 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 349
GQCC +GSR V E + D +E+ ++ K GDP + G I EK+ Y+
Sbjct: 300 AGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYV 359
Query: 350 RSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408
+G+ GA+L GGER+G G Y PTVF GV DM IA++EIFGPV S L +K DE
Sbjct: 360 TAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419
Query: 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 468
+ +NA+++GL+A V++ NL+TA +R +R G WIN +P GGYK+SG GRE
Sbjct: 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRE 479
Query: 469 KGSYSLSNYLQVKAVVTALKNPA-WL 493
G Y Y Q K V L PA W
Sbjct: 480 LGRYGFDEYSQFKGVHVTLGRPAPWF 505
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 707 bits (1828), Expect = 0.0
Identities = 164/494 (33%), Positives = 243/494 (49%), Gaps = 64/494 (12%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE-- 118
+ + QL ING + K P ++P T ++I + EDV+ AV+AA+ A
Sbjct: 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62
Query: 119 -GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W + R++ + A + E+A LE+ D GKP ++ A ++ F YY
Sbjct: 63 GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE-AAWDIDDVAGCFEYY 121
Query: 178 AGWADKIQGLTAPA----DGPYHVQTLHEPIGV--------------------------- 206
A A+K+ + L EPIGV
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181
Query: 207 --------------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 240
GVLNI++G GP AGA LA+H +VDK+AFTGS+
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 241 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 300
TG ++ AA+ +KPV+LELGGKSP +V ED D+DKAAE A + F+ GQ C A SR
Sbjct: 242 TGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 301 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 360
+HES+ +F+ + + DP + G + GP + Q+EKILK++ + GA +
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 361 TGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 418
TGG R KG++I+PT+ T V +M I ++E+FGPV + + +E I +N + YG
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYG 420
Query: 419 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 478
L A V +++L+ + +A + G VW+NC P+GG K+SG GRE G + L NYL
Sbjct: 421 LGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYL 480
Query: 479 QVKAVVTALKNPAW 492
VK V + W
Sbjct: 481 SVKQVTQYISEEPW 494
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 697 bits (1800), Expect = 0.0
Identities = 172/510 (33%), Positives = 255/510 (50%), Gaps = 67/510 (13%)
Query: 44 STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
+ + + + +K I G+FV S SG+TFP+LDP T +V+ A G
Sbjct: 5 DRVAGISWETIEEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGER 64
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
+V+RA AA +AF W R A ER + +LR A+L+E+H DE+A +E D G+
Sbjct: 65 EVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRI-V 121
Query: 164 QTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGV---------------- 206
+ +V F +YA +A+ ++ T P D + T+ P G
Sbjct: 122 RAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTW 181
Query: 207 -------------------------------------AGVLNIVSGYGPTAGAALASHME 229
GV N+V G+G AGAAL +H
Sbjct: 182 RIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPL 241
Query: 230 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 289
V L TG T TGKIV++ AA +LK ++ ELGGKSP +V DAD+++A + + +F
Sbjct: 242 VPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSF 300
Query: 290 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 349
G+ C A SR V E +++ FV K A VG P + GP I E +++L Y+
Sbjct: 301 NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYV 360
Query: 350 RSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 401
+G GA+L GGER ++G Y+ PTVF G ++ M IA++EIFGPV +
Sbjct: 361 EAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIP 419
Query: 402 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 461
+KD +E ++++N ++YGLAA VFT +L+ A+ L L G V++N +V PFGG K
Sbjct: 420 FKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVK 479
Query: 462 QSGQGREKGSYSLSNYLQVKAVVTALKNPA 491
SG RE G+Y+L Y +K + L+ P
Sbjct: 480 GSGDRREGGTYALDFYTDLKTIALPLRPPH 509
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 695 bits (1796), Expect = 0.0
Identities = 159/501 (31%), Positives = 239/501 (47%), Gaps = 65/501 (12%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDV 105
+ + T V V G+ + S G T P +P TG V+ + AE+V
Sbjct: 1 AQLVDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEV 60
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
++AV +A+ A+ W +M ERS+++L A ++ D IA LE +NGK A+
Sbjct: 61 DQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTI-TEAEY 117
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGV------------------- 206
++ + YYAG A + G G T EP+GV
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177
Query: 207 ----------------------------------AGVLNIVSGYGPTAGAALASHMEVDK 232
G++N+V G G G+ L H V K
Sbjct: 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAK 236
Query: 233 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 292
++FTGS TGK V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ
Sbjct: 237 VSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQ 295
Query: 293 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 352
C G+R FV + QF+E+ VVGDP + G I Q +K+L ++
Sbjct: 296 VCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQA 355
Query: 353 VDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406
GA++ GGE L GY++ P V +DDM K+EIFGPV S+L + +
Sbjct: 356 KKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEE 415
Query: 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 466
EV+QR+N + +GLA+GVFT ++ A+ + L G+ +IN + + +PFGGYK SG G
Sbjct: 416 EVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFG 475
Query: 467 REKGSYSLSNYLQVKAVVTAL 487
RE G ++ Y Q+K V+ +
Sbjct: 476 RENGQATVDYYSQLKTVIVEM 496
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 692 bits (1788), Expect = 0.0
Identities = 161/492 (32%), Positives = 241/492 (48%), Gaps = 62/492 (12%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD 117
TP I+G +V+ +G F ++ P TG++I + V RA+++A++A
Sbjct: 7 TPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ- 65
Query: 118 EGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W M+ R +I+ R AD++ ND ++ LET D GKP +++ + F ++
Sbjct: 66 -KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFF 124
Query: 178 AGWA-DKIQGLTAPADGPYHVQTLHEPIGV------------------------------ 206
G A + G P G T P+GV
Sbjct: 125 GGIAPSALNGDYIPLGGD-FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVF 183
Query: 207 -----------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 243
G+ N++ G T G L +H +V K++ TGS TG+
Sbjct: 184 KPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGR 242
Query: 244 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 303
V AA +LK VT+ELGGKSP IV +DAD++ A A F++ GQ C G+R FV
Sbjct: 243 KVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQ 301
Query: 304 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 363
+ +F+E ++GDP GP + Q EK+L YI G GA L TGG
Sbjct: 302 KKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361
Query: 364 ---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 420
+ +G Y++PTVF V DDM IA++EIFGPV +L + D DEV+ R+NA+++GLA
Sbjct: 362 GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLA 421
Query: 421 AGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 480
GVFT +L A+ ++ L G++WIN +++ IPFGG KQSG GRE + +L +Y ++
Sbjct: 422 GGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSEL 481
Query: 481 KAVVTALKNPAW 492
K V +
Sbjct: 482 KTVYVSTGKVDA 493
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 683 bits (1765), Expect = 0.0
Identities = 147/492 (29%), Positives = 226/492 (45%), Gaps = 58/492 (11%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+ + +LLING+ V G+ P +P TGDV+ +AE AE V
Sbjct: 4 HHHHHHLESTSLYKKAGLMQHKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQV 62
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+ AV AA AF W + T R++ +L+ AD++E + A LE+ + GKP +
Sbjct: 63 DAAVRAADAAF--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFND 120
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGV------------------ 206
E+P +FR++AG A + GL A + +P+GV
Sbjct: 121 EIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180
Query: 207 ----------------------------------AGVLNIVSGYGPTAGAALASHMEVDK 232
AGV+NI+ G G T G L H +V
Sbjct: 181 APALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRM 240
Query: 233 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 292
++ TGS TG+ ++ A S++K +ELGGK+P IV +DAD++ E ++N GQ
Sbjct: 241 VSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQ 299
Query: 293 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 352
C A R + + +YD VEK A G P + GP E++ K +
Sbjct: 300 DCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEA 359
Query: 353 V-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411
G K+ TGGE+ GYY PT+ G D I + E+FGPV S+ + + ++V+
Sbjct: 360 KATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNW 419
Query: 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGS 471
+N SQYGLA+ V+T ++ A+ + L+ G W+N + + +P GG K SG G++
Sbjct: 420 ANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSL 479
Query: 472 YSLSNYLQVKAV 483
Y L +Y V+ V
Sbjct: 480 YGLEDYTVVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 678 bits (1752), Expect = 0.0
Identities = 138/494 (27%), Positives = 215/494 (43%), Gaps = 58/494 (11%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S+ + TQLLI +F + L+PRTG I +AE ++
Sbjct: 8 SSGVDLGTENLYFQSMMDTQLLIGSRFEA-GTEAEEHILNPRTGAGIIDLAEASHAQIDA 66
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AV AA +AF W + T ERS +L+ AD +E+ DE AALE + GKP E+
Sbjct: 67 AVDAAERAFV--GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL 124
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGV-------------------- 206
P +R++AG + A P + +PIG+
Sbjct: 125 PAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184
Query: 207 --------------------------------AGVLNIVSGYGPTAGAALASHMEVDKLA 234
GV+N+++G G T G AL +H +V ++
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVS 244
Query: 235 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 294
TG TGK VL AAK +K LELGGK+P IV DAD++ ++N GQ C
Sbjct: 245 ITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDC 303
Query: 295 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 354
A R + +Y++ V + + GP I Q +++ ++ D
Sbjct: 304 TAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAAD 363
Query: 355 -GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 413
++ TGG +G++ +PTV G + I + E+FGPV S+ ++ D+ + +N
Sbjct: 364 QKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWAN 423
Query: 414 ASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYS 473
S YGLA+ V+T ++ A L+ G WIN + +P GG KQSG G++ Y+
Sbjct: 424 DSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYA 483
Query: 474 LSNYLQVKAVVTAL 487
L +Y V+ ++
Sbjct: 484 LEDYTAVRHIMINH 497
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 626 bits (1616), Expect = 0.0
Identities = 150/485 (30%), Positives = 217/485 (44%), Gaps = 58/485 (11%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+Y +L I G++ ++ P TG+ + V A DV+ AV+AAR AFD GPWP
Sbjct: 6 TEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWP 65
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
+ER+ +I +L D L + G+P + Y+AG AD
Sbjct: 66 STPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAAD 125
Query: 183 KIQGLTAPADGPYHVQTLHEPIGV------------------------------------ 206
K+ EP+GV
Sbjct: 126 KVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 207 -----------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249
GVL++V G G G AL S+ ++D FTGS+ G+ V + A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 309
A+ LKP TLELGGKS I+ ED D+ A + ++ N GQ C +R S YD+
Sbjct: 245 AE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 310 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 367
V VG P Q GP I +Q ++ YI G++ GA+L GG R
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGL 363
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
G++I+PTVF V + M IA++EIFGPV +I+ Y ++ I +N S YGLA V+T +
Sbjct: 364 DNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTD 423
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+ + + +R G+ IN + FD PFGGYK SG GRE G + ++ Q K+V+ +
Sbjct: 424 VPKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482
Query: 488 KNPAW 492
Sbjct: 483 GYTVA 487
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 601 bits (1553), Expect = 0.0
Identities = 134/493 (27%), Positives = 226/493 (45%), Gaps = 61/493 (12%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
P ++ + ING + D ++ +DP T + ++ G D +
Sbjct: 7 HHMGTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDAD 66
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
+A++AA+KAF W + +ER + + ++ E+ + ++A + + G P + + +
Sbjct: 67 KAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQ 124
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGV-------------------- 206
+ R + + A +G ++ IGV
Sbjct: 125 TATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIP 184
Query: 207 ---------------------------------AGVLNIVSGYGPTAGAALASHMEVDKL 233
+GV N+++G G G+ L++H +++ +
Sbjct: 185 ALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMI 244
Query: 234 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 293
+FTGST GK + + A+ LK V LELGGK I+ DAD+D A + F+N GQ
Sbjct: 245 SFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQS 302
Query: 294 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 353
C A +R V +++YD+ ++ A +A K VG + G GP + EQ++KI I+SG+
Sbjct: 303 CNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362
Query: 354 DGGAKLETGGERLGA---KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
D GA L TGG L +GYY++PTVF VK M I ++EIFGPV S+L + DE +
Sbjct: 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVT 422
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 470
+N ++YGL + + + + +R G V +N + FGG K SG+ RE G
Sbjct: 423 LANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHE-LPGGSYFGGVKFSGRAREGG 481
Query: 471 SYSLSNYLQVKAV 483
+ + +L KA+
Sbjct: 482 LWGIKEFLDTKAI 494
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 597 bits (1543), Expect = 0.0
Identities = 157/477 (32%), Positives = 234/477 (49%), Gaps = 64/477 (13%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
DYT+ ING++V+S S +T ++P T +VI VA+G DV++AV AA + E +
Sbjct: 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ ER ++ + E D+I T + G P S + M F D
Sbjct: 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDN 123
Query: 184 IQGLTAPADGPYHVQTLHEPIGV------------------------------------- 206
+ D + E IGV
Sbjct: 124 YEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 207 ----------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250
GV N+V+G G G L+ H +V ++FTGS TG +++ AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239
Query: 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 310
K + K V+LELGGKSP+IV +D D+ +AA+ + N GQ C AG+R V + D F
Sbjct: 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 311 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-- 368
+ + + VG+P + G Q GP I +QF+++ YI G++ GA+L GG
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL 358
Query: 369 -KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
KGY+ +PT+F V + M IA++EIFGPV S++ Y DLDE IQ +N ++YGLA V +
Sbjct: 359 EKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKD 418
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
+T + + R++ G+V IN +PFGGYKQSG GRE G Y + +L+VK++
Sbjct: 419 KETLHKVARSIEAGTVEINEAG-RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 571 bits (1475), Expect = 0.0
Identities = 142/499 (28%), Positives = 220/499 (44%), Gaps = 72/499 (14%)
Query: 49 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNR 107
A A + + +Y L+ING+ V + + +P R ++ V++ + +
Sbjct: 22 AFEEALGLVEKELGKEY-PLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEK 78
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
A+ +A +AF W + ER+ I+++ A ++ R E +A + GKP+++ A +
Sbjct: 79 AIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKE-ADADT 135
Query: 168 PMTTRLFRYYAGWADKIQ-------------------------------------GLTAP 190
YYA ++ G
Sbjct: 136 AEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVA 195
Query: 191 A-------------DGP----YHVQTLHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDK 232
P V+ L + G+ GV+N V G G G L H +
Sbjct: 196 PIVTGNTVVLKPASTTPVVAAKFVEVLED-AGLPKGVINYVPGSGAEVGDYLVDHPKTSL 254
Query: 233 LAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 287
+ FTGS G + + AA ++LK V +E+GGK +V DAD+D AAE + F
Sbjct: 255 ITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF 314
Query: 288 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 347
GQ C AGSR +H+ VYD+ +EK ALA VGDP GP ID + FEKI+
Sbjct: 315 GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMS 374
Query: 348 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407
YI G G +L TGGE + G++I+PT+ + + +I ++EIFGPV + K D D
Sbjct: 375 YIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDH 433
Query: 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQ 465
++ +N ++YGL V T N R VG+++ N C PFGG+K SG
Sbjct: 434 ALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGT 493
Query: 466 G-REKGSYSLSNYLQVKAV 483
+ G L+ ++Q K V
Sbjct: 494 DSKAGGPDYLALHMQAKTV 512
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 533 bits (1376), Expect = 0.0
Identities = 131/486 (26%), Positives = 210/486 (43%), Gaps = 77/486 (15%)
Query: 65 YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ L I G++VD+ + +L+P +V+ A+ + A+ AA KAF W
Sbjct: 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKD 92
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+RS+++L+ A L+ R E+ A ++ GK + + A +V YYA A +
Sbjct: 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALR 151
Query: 184 IQGLTAPADGP--YHVQTLHEPIGVAGV-------LNIVSGYGPTAGAALA--------- 225
+ ++ + P+G V + I +G +A
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG---MIVGPVAVGNTVIAKP 208
Query: 226 ----------------------------------------SHMEVDKLAFTGSTTTGKIV 245
H + + FTGS G +
Sbjct: 209 AEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268
Query: 246 LQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 300
+ A + + K +E GGK+ IV E AD D AAE + + QGQ C A SR
Sbjct: 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRL 328
Query: 301 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 360
+ + Y+ +E+ A + VG P + GP + +EQ K+L YI G + G +L
Sbjct: 329 ILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLV 386
Query: 361 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 420
GG+RL +GY+I PTVFT V IA++EIFGPV S+++ KD E ++ +N + YGL
Sbjct: 387 LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLT 446
Query: 421 AGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS-YSLSNY 477
GV++ + R VG+++ N PFGG+K SG + G+ L +
Sbjct: 447 GGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLF 506
Query: 478 LQVKAV 483
L++KAV
Sbjct: 507 LEMKAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 514 bits (1325), Expect = e-180
Identities = 142/478 (29%), Positives = 215/478 (44%), Gaps = 63/478 (13%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+D T+ LI GQ+V+ S + ++P VI + DV+ A AA+KA W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ--AEWA 67
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
A ERS II R A+LLE H +EI ++G + A E+ + + + A +
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSK-ANLEITLAGNITKESASFPG 126
Query: 183 KIQGLTAPADGP-YHVQTLHEPIGVAGVL---N-----IVSGYGP--------------- 218
++ G +P++ P + GV GV+ N + P
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 219 ---TAGAALA----------------------------SHMEVDKLAFTGSTTTGKIVLQ 247
T G A +H ++FTGST G+ V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 248 LAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
LA +K V LELGG +PF+V DAD+D AA+ A F +QGQ C + +R V +V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
+D+F+EK GDP G GP I+ Q + + I GA ++ G
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI- 365
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
+G + P VF+ V DM IA++EIFGP+ S+LK D + +NAS +GL+A V++
Sbjct: 366 --EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
++D A + G V IN V D + FGG K SG GR G +++ + + +
Sbjct: 424 DIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 490 bits (1264), Expect = e-171
Identities = 127/502 (25%), Positives = 188/502 (37%), Gaps = 73/502 (14%)
Query: 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
E I V + G++ S G+ P I V E+V R +
Sbjct: 7 EGVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLF 64
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
K M ER ++ + AD++ER+ D A + + GKP A EV
Sbjct: 65 KRGRW-SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDR 122
Query: 174 FRYYAGWADKIQGLTAPADGPYHVQ-----TLHEPIGV---------------------- 206
R KI G P D Y EP+GV
Sbjct: 123 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 182
Query: 207 -------------------------------AGVLNIVSGYGPTAGAALASHMEVDKLAF 235
+ +++ G + + V ++F
Sbjct: 183 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSF 241
Query: 236 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 295
TGST G+ + +K +ELGG P IV EDAD+D AA+ ++ GQ C
Sbjct: 242 TGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 298
Query: 296 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 355
A VY + VE+ VGDP + GP I ++++ I V+
Sbjct: 299 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 358
Query: 356 GAKLETGGERLGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 412
G ++ GG RLG Y++PT DM++ K E+F PV ++ KDLD+ I+ +
Sbjct: 359 GGRVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELA 416
Query: 413 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-PFGGYKQSGQGREKGS 471
N YGL A VF ++ +R L VG+++IN PFGG K+SG RE
Sbjct: 417 NGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIG 476
Query: 472 YSLSNYLQVKAVVTALK-NPAW 492
Y++ K +V K W
Sbjct: 477 YAVEAVTAYKTIVFNYKGKGVW 498
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 490 bits (1264), Expect = e-171
Identities = 142/485 (29%), Positives = 204/485 (42%), Gaps = 70/485 (14%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L NG++V+S +G+ P +G + + E+VN A+ A+ A W
Sbjct: 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI--WKIRP 69
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+ER ++ +ADLLE + I L + KP + A EV T + R+ A A ++
Sbjct: 70 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKS-AIGEVSRTADIIRHTADEALRLN 128
Query: 186 GLTAPADGPYHVQ------TLHEPIGV--------------------------------- 206
G T D EP+GV
Sbjct: 129 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 188
Query: 207 --------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246
G++ +V+G G G L H +D + FTG TTTG+
Sbjct: 189 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER-- 246
Query: 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
++ K+ + PV LELGGK P IV +DAD+ A F GQ C A R FV +SV
Sbjct: 247 -ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV 305
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
DQ V L + VG P P ID + I I ++ GA L +G +R
Sbjct: 306 ADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR- 363
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
+G + PT+ V M +A +E FGPV I++ KD +E I SN S YGL A +FT
Sbjct: 364 --QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTK 421
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
+ D A + + L VG+V IN PF G K+SG G + SL + + + V
Sbjct: 422 DTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481
Query: 486 ALKNP 490
L
Sbjct: 482 NLAEN 486
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 474 bits (1222), Expect = e-165
Identities = 120/473 (25%), Positives = 184/473 (38%), Gaps = 62/473 (13%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ I GQ++ G+T +LDP V+ +A V+ AV AAR+AF W R
Sbjct: 6 STHYIAGQWLA-GQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R +++ RFA L+ DE+A + + GKP + + TEV +
Sbjct: 63 LEQRIELLERFAATLKSRADELARVIGEETGKPLWE-SATEVTSMVNKVAISVQAFRERT 121
Query: 186 GLTAPADGPYHVQTLHEPIGV--------------------------------------- 206
G + H+P GV
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181
Query: 207 --------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
AGVLN+V G G G ALA+H +D L FTGS+ TG ++
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFV 311
K + LE+GG +P +V E AD+D A + F + GQ C R V + + D +
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300
Query: 312 EKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 370
+ A++ VG + G I E +LK + GA+ +
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGA 360
Query: 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
+ P + V +E FGP+ +++Y D I+ +NA+QYGLAAG+ + + +
Sbjct: 361 ALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRER 419
Query: 431 ANTLMRALRVGSVWIN-CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482
+ R G V N ++ PFGG SG R Y+ A
Sbjct: 420 FEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVA 472
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 440 bits (1133), Expect = e-151
Identities = 135/473 (28%), Positives = 219/473 (46%), Gaps = 59/473 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W +
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALP 64
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ + + + + EI+AL + GK + A+ EV T Y A WA + +
Sbjct: 65 AIERASWLRKISAGIRERASEISALIVEEGGKIQQL-AEVEVAFTADYIDYMAEWARRYE 123
Query: 186 GLTAPADGP-YHVQTLHEPIGV-------------------------------------- 206
G +D P ++ +GV
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
GV N+V G G T G LA + +V ++ TGS + G+ ++ AA
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA- 242
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
N+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV
Sbjct: 243 KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFV 302
Query: 312 EKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 370
+ G+P + I GP I++ E++ + + V+ GA++ GG+ + KG
Sbjct: 303 NRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKG 362
Query: 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
YY PT+ V+ +M I +E FGPV ++ + L++ I +N S YGL + ++T NL+
Sbjct: 363 YYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNV 422
Query: 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
A ++ L+ G +IN + G+++SG G G + L YLQ + V
Sbjct: 423 AMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 423 bits (1091), Expect = e-145
Identities = 133/483 (27%), Positives = 209/483 (43%), Gaps = 72/483 (14%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ +NG++ S +P +G + V E+V+ ++A+KA W ++
Sbjct: 5 YKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALS 60
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +++
Sbjct: 61 YIERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRME 119
Query: 186 GLTAPADGPYHVQ------TLHEPIGV--------------------------------- 206
G EP+G+
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 207 --------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246
AGV N ++G G G + H V+ + FTGST G+ +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
++A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 307 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 366
D+ VEK + +G+P P ID++ + + I D GA T +R
Sbjct: 297 ADELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR- 354
Query: 367 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426
+G I P +F V DM +A +E FGPV I++ ++E I+ SN S+YGL A +FT+
Sbjct: 355 --EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTN 412
Query: 427 NLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485
+ A + L VG+V IN PF G K+SG G + YS+ VK+VV
Sbjct: 413 DFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
Query: 486 ALK 488
+K
Sbjct: 473 DIK 475
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 391 bits (1006), Expect = e-132
Identities = 124/475 (26%), Positives = 201/475 (42%), Gaps = 64/475 (13%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ ING++ SG+T L+P VIT + + + A A+KA E W +
Sbjct: 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
T +R ++ + L + D+I + + G + + E+ T + + +
Sbjct: 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIK-STIELEQTIAILDEAMTYTGE 121
Query: 184 IQGL-TAPADGP-YHVQTLHEPIGVAGVL---N-----IVSGYGP--------------- 218
+ G+ P+D + P+GV + N + P
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 219 ---TAGAALA----------------------------SHMEVDKLAFTGSTTTGKIVLQ 247
+ G +A ++ ++FTGST G+ + +
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 307
+A K + LELGG +PF V DADVD+A + A + F +QGQ C +R VH+ VY
Sbjct: 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
D+FVEK A + GD GP I+ Q EK L+ I G +L G+R+
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV- 359
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
G + P VF G ++ IA+ E+F P+ +I+K E I +N ++YGL++ VFT +
Sbjct: 360 --GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSD 417
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVK 481
L+ + G +N V D+ I FGG K SG GR + + + K
Sbjct: 418 LEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTK 472
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 391 bits (1007), Expect = e-132
Identities = 143/476 (30%), Positives = 204/476 (42%), Gaps = 62/476 (13%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
I GQ+V S T L P TG VI + G D A+ A+ A W ++T
Sbjct: 13 KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A R ++ FA+ + + +A + + GK A+ EV +T Y A I+
Sbjct: 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSV-AEMEVDVTATFIDYGCDNALTIE 129
Query: 186 GLTAPADGP-YHVQTLHEPIGV-------------------------------------- 206
G P+D + P GV
Sbjct: 130 GDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPL 189
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
GVLN+++G G G L + TGST GK + + +A
Sbjct: 190 ATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA- 248
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+ PV LELGGK+P +V +DAD+DKAAE A + F N GQ C R +VH SVYD+F+
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----G 367
K L VGDP Q GP+ + + + I + + GA + TGG+
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGF 368
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
G + +PTV VK D ++ +E FGP+ I+K +++ I+ N S YGL+A V T +
Sbjct: 369 EGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQS 428
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
N + L VG V+IN G+KQSG G E G + L YL+ K V
Sbjct: 429 FANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 388 bits (998), Expect = e-131
Identities = 147/476 (30%), Positives = 235/476 (49%), Gaps = 58/476 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +T
Sbjct: 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA--WRALT 67
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +I
Sbjct: 68 AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIY 126
Query: 186 GLTAPADGP-YHVQTLHEPIGV-------------------------------------- 206
G T P + + +PIGV
Sbjct: 127 GDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPF 186
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
AGV N+V+G G L S+ V KL+FTGST G+ +++ A
Sbjct: 187 SALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA- 245
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
EK K +GD G+ GP ID + K+ ++I ++ GA++ GG+ G
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGN 365
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+ +PT+ V + ++K+E FGP+ + ++KD +VI ++N +++GLAA + +L
Sbjct: 366 FFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRV 425
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+ AL G V IN + + PFGG K SG GRE Y + +YL++K + L
Sbjct: 426 FRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 387 bits (997), Expect = e-131
Identities = 151/476 (31%), Positives = 236/476 (49%), Gaps = 58/476 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q I G++ + S TF DP TG+ + V + A + RA+ AA+ A+ W T
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG--WRMKT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R+ DL+ ++D++A + T + GKP + A+ E+ ++A ++
Sbjct: 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKRVA 129
Query: 186 GLTAPADGP-YHVQTLHEPIGV-------------------------------------- 206
G T P + + EPIGV
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
GVL++V G G + S+ V KL+FTGST G++++ +A
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA- 248
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+K +TLELGG +PFIV +DAD+D A E A + + N GQ C +R FVHE VYD F
Sbjct: 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
+K A K VG + G GP I+ +K+ +I + GA L TGG+R
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG 368
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+ +PTV TGVK DM +AK+E FGP+ + ++ +E+++ +N +++GLAA +++ ++
Sbjct: 369 FFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRV 428
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
+ AL G V IN + + PFGG KQSG GRE Y + +Y+ +K + A+
Sbjct: 429 WRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVAV 484
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 386 bits (995), Expect = e-130
Identities = 159/477 (33%), Positives = 237/477 (49%), Gaps = 60/477 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+Q L+NG+++D+A G T +P G VI V + A+ A+ KA W T
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG--WAAKT 90
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ ++ DL+ + D+IA + T + GKP + A+ EV ++A A ++
Sbjct: 91 AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKRVY 149
Query: 186 GLTAPADGP-YHVQTLHEPIGV-------------------------------------- 206
G T PA + + +P+GV
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
AGVL IV+G GA L S+ V KL+FTGST G++++ A
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+K ++LELGG +PFIV +DAD+D A + A + + N GQ C +R +V VYD+F
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 371
EK A + VG+ + G+ GP I+ + K+ +I V GAKL TGG+ LG G
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GL 386
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
+ +P + TGV DML+AK+E FGP+ + + +EVI ++N + +GLAA +T N A
Sbjct: 387 FFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRA 446
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488
+ AL G V N + + PFGG KQSG GRE Y + YL+ K + +A K
Sbjct: 447 IRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 383 bits (985), Expect = e-129
Identities = 142/482 (29%), Positives = 207/482 (42%), Gaps = 59/482 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
I G++ DSA G TF +P TG VI V EDV AV A + A
Sbjct: 12 LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRL--TNPWP 69
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R K + D L+ + +EI + ++GKP+++ AQ EV F Y A +
Sbjct: 70 IETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKE-AQGEVDYAAGFFDYCAKHISALD 128
Query: 186 GLTAPADGP-YHVQTLHEPIGV-------------------------------------- 206
T P + P+GV
Sbjct: 129 SHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPL 188
Query: 207 ---------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
G++N+V G G L H +V L+FTGST G+ ++ A
Sbjct: 189 TMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA- 247
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
+K + LELGG +PFIV +DAD++ AA+ F GQ C +R FVHE V D F
Sbjct: 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFG 307
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KG 370
+K K VGD GI GP I+ + F+K+ ++++ +D GA L G + G
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG 367
Query: 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
+ PTV GV +M ++E FGP+ + ++ +EVI N +++GLA+ VFT + +
Sbjct: 368 LFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAER 427
Query: 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 490
A + LR G V N PFGG K SG GRE G L +++ + V
Sbjct: 428 AQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFAEN 487
Query: 491 AW 492
+
Sbjct: 488 LY 489
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 371 bits (954), Expect = e-124
Identities = 140/476 (29%), Positives = 227/476 (47%), Gaps = 64/476 (13%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T + G+++ + TFP DP +G + VA+ + AV AA +AF W ++
Sbjct: 13 TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A ++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 GLTAPADGPYH-VQTLHEPIGV-------------------------------------- 206
G L +PIGV
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 207 ---------------AGVLNIV---SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
+GV N++ G A+ + V K++FTGSTTTGKI+L
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
AA +++K V++ELGG +PFIV + A+VD+A A + F N GQ C ++ V ++D
Sbjct: 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 309 QFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
FV+ A A+ VG+ F+ G QGP I+ + EK+ K + V GA + TGG+R
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+ +PT+ V DML +E FGP+ ++K+ +E I +NA+ GLA ++ +
Sbjct: 367 LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD 426
Query: 428 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+ L VG V +N + PFGG KQSG GRE Y + YL++K V
Sbjct: 427 PAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 378 bits (972), Expect = e-121
Identities = 127/481 (26%), Positives = 214/481 (44%), Gaps = 75/481 (15%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
ING+ V + PT++P + +V+ + + +V A++AA+ AF W
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDPR 590
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ +L+ A + E++A + + GK ++Q A +V YYA ++
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYAREMIRLGQP 649
Query: 188 TAPADGP-YHVQTLHEPIGVAGV-------LNIVSGYGPTAGAALA-------------- 225
P +EP GVA V L I G A AA+
Sbjct: 650 QRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG---MASAAIVTGNCVVFKPSGITS 706
Query: 226 -----------------------------------SHMEVDKLAFTGSTTTGKIVLQLAA 250
H ++ +AFTGS TG +++ AA
Sbjct: 707 IIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAA 766
Query: 251 K-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 305
K +N+K + E+GGK+ I+ +DAD+D+A Y+ F QGQ C A SR V ++
Sbjct: 767 KVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDA 826
Query: 306 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 365
VYD+F+E+ ++A VG G D + + I +Y G G L
Sbjct: 827 VYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY-ESPV 885
Query: 366 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425
+GY++ T+ G+K + IA++EIFGPV ++++ KD D+ I+ +N++Q+ L G+F+
Sbjct: 886 PAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFS 945
Query: 426 HNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKA 482
+ + R RVG+++IN + PFGG + SG G + G L +++ +
Sbjct: 946 RSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRV 1005
Query: 483 V 483
V
Sbjct: 1006 V 1006
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 358 bits (920), Expect = e-119
Identities = 90/288 (31%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
GV N+++G G G + + +V+ ++FTGS+ G+++ + A K + LELGG +P
Sbjct: 191 LGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNP 247
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
IV +DAD++KA F GQ C + V ES+ D+F+E A VG+P
Sbjct: 248 NIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNP 307
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 386
GP I E E + K + +D G KL GG+R PT+ V D +
Sbjct: 308 LDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTILE-VDRDNI 363
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN 446
+ K E F PV I++ + +E+I +N+++YGL + +FT++++ + L G V IN
Sbjct: 364 LCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVIN 422
Query: 447 CFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 493
+F +PFGG K+SG GRE Y++ +K ++ + +
Sbjct: 423 DSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAENLYF 470
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 2e-41
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+G++++ + ++P + +VI + E+ A+ A K + +
Sbjct: 2 MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEV--MKNLPIT 56
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
+R I++ A ++ +E+A + D GKP +Q A+ EV + F+ A + + +
Sbjct: 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKEHRDE 115
Query: 188 TAPADGPYHVQTLHEPIGVAG 208
P+D + T EP+G+ G
Sbjct: 116 VIPSDD-RLIFTRREPVGIVG 135
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 353 bits (909), Expect = e-117
Identities = 108/461 (23%), Positives = 185/461 (40%), Gaps = 58/461 (12%)
Query: 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141
+ +++P T + ++ ++ A++ A + + W R++I+ A+ L+
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62
Query: 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH 201
H DE+A + T + GK + ++ EV + + YYA ++ T + L
Sbjct: 63 EHEDELAKMMTLEMGKLLSE-SKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121
Query: 202 EPIGV-----------------------------------------------------AG 208
+ GV G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268
L + +A + +A TGS G V + A K NLK T+ELGG FI
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239
Query: 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328
V +DAD + + A +N GQ C + R V +S YD+ + + + GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 388
P + EK+ ++ +D GAK+ + +KG + +PT+ T + D +
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359
Query: 389 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 448
E+FGP+ + +D + IQ +N S YGL + V ++D A + + G IN
Sbjct: 360 DKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGR 419
Query: 449 DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 489
+ +PFGG K+SG GRE L ++ V+ KN
Sbjct: 420 WITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKN 460
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 349 bits (899), Expect = e-116
Identities = 118/459 (25%), Positives = 187/459 (40%), Gaps = 58/459 (12%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD 138
+ +++P TG + + A+++ A+S A F + W + +R++ +
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDIGQ 62
Query: 139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ 198
L H +E+A T + GKP +Q A+ EV + L +YA +
Sbjct: 63 ALRAHAEEMAQCITREMGKPIKQ-ARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAV 121
Query: 199 TLHEPIGV---------------------------------------------------- 206
+ P+GV
Sbjct: 122 IEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGT 181
Query: 207 -AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 265
AGV V+ + + + TGS G + A LK LELGG
Sbjct: 182 PAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239
Query: 266 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325
PFIV DAD++ A + A + N GQ C A R V E + F ++ A A +GD
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299
Query: 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 385
P GP + +++ + +++ V GA+L GGE++ +G Y TV V DM
Sbjct: 300 PLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDM 359
Query: 386 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWI 445
+ E+FGPV +I KD + +N S++GL+A +FT + A + L G V+I
Sbjct: 360 TAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFI 419
Query: 446 NCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
N + DA + FGG K+SG GRE + L + V+ V
Sbjct: 420 NGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 338 bits (869), Expect = e-111
Identities = 63/320 (19%), Positives = 110/320 (34%), Gaps = 36/320 (11%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKS 265
G L+I+ G ++ L D ++FTGS T + A + ++ +
Sbjct: 209 PGALSIICG---SSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265
Query: 266 PFIVCEDADV-----DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 320
I+C DA D + + GQ C A R FV E+ + +E A K
Sbjct: 266 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAK 325
Query: 321 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-----GAKGYYIKP 375
VG+P ++ G + EQ+E +L I + + + P
Sbjct: 326 ITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAP 385
Query: 376 TVF--TGVKDDMLIAKDEIFGPVQSILKYKDLD--------EVIQRSNASQYGLAAGVFT 425
+F + L+ E+FGPV S+ Y+ + + Q L A +++
Sbjct: 386 HLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYS 445
Query: 426 HNLDTANTLMRALRVGSVWINCFDVFDAAI-----------PFGGYKQSGQGREKGSY-S 473
++ L L ++ GG ++G G E G +
Sbjct: 446 NDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRA 505
Query: 474 LSNYLQVKAVVTALKNPAWL 493
L+ Y + A+ A L
Sbjct: 506 LAFYHRRSAIQAASAAIGTL 525
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 4e-45
Identities = 29/158 (18%), Positives = 52/158 (32%), Gaps = 14/158 (8%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ + + GQ++ +G DP TG + V+ + A
Sbjct: 6 ELLKNHVAGQWIA-GTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--AALRA 62
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+T +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 63 LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGAS 121
Query: 184 IQGLTAPADGP----------YHVQTLHEPIGVAGVLN 211
+ + A DG L GVA +N
Sbjct: 122 LGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFIN 159
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 331 bits (851), Expect = e-109
Identities = 87/496 (17%), Positives = 156/496 (31%), Gaps = 104/496 (20%)
Query: 75 VDSASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
++ + F + TG+ + +VN+A +AA K + + R+ +R+ ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLL 58
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
A LE +D+I A + P + E+ T R +A + A D
Sbjct: 59 RTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDT 117
Query: 194 P---------YHVQTLHEPIGVAGV-------LNIVSGYGPTAGAALA------------ 225
P ++ +G V L + G TA +ALA
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTA-SALAAGCPVIVKGHTA 176
Query: 226 -----------------------------------------SHMEVDKLAFTGSTTTGKI 244
SH E+ + FTGS G+
Sbjct: 177 HPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRA 236
Query: 245 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKA--AELAHYALFFNQGQCCCAGSRTF 301
+ LA + P ELG +P + A KA A+ ++ GQ C F
Sbjct: 237 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVF 296
Query: 302 VHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 360
+ F+E A +L P I + + G D G +
Sbjct: 297 ALNTPETQAFIETAQSL------IRQQSPSTLLTPGIRDSYQS---QVVSRGSDDGIDVT 347
Query: 361 TGGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGPVQSILKYKDLDEVIQRSNASQY 417
+ +F ++ ++EIFGP I+ +++ +++ S
Sbjct: 348 FSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAG 403
Query: 418 GLAAGVFTHNLDT--ANTLMRAL--RVGSVWINCF---DVFDAAIPFGGYKQS---GQGR 467
L A + D + L+ L G + N + A+ GG +
Sbjct: 404 SLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST 463
Query: 468 EKGSYSLSNYLQVKAV 483
G+ ++ +L+ A
Sbjct: 464 SVGAEAIHRWLRPVAY 479
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 304 bits (782), Expect = 1e-98
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 5/280 (1%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
+ ++ G G G A+A V+ L+FTGST GK V + + LELGG +
Sbjct: 218 GAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQER-FGRSLLELGGNNA 275
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
I EDAD+ A +A GQ C R F+HES++D+ V + + VG+P
Sbjct: 276 IIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 386
+ + GP + L + G + GG+ + G Y++PT+ TG+ D
Sbjct: 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDAS 395
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVW 444
IA E F P+ + K+++ +EV +N + GL++ +FT +L + + G V
Sbjct: 396 IAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVN 455
Query: 445 INCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
+N + FGG K +G GRE GS + Y++
Sbjct: 456 VNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-30
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 6/145 (4%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ + NG + G+ T P + I V + D V AR+A+ W +
Sbjct: 24 NEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKI--WADIP 79
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +I+ + D L + +L + + GK EV + Y G + I
Sbjct: 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKIL-VEGVGEVQEYVDICDYAVGLSRMIG 138
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGV 209
G P++ H + P+G+ G+
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGI 163
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 283 bits (725), Expect = 1e-85
Identities = 116/505 (22%), Positives = 197/505 (39%), Gaps = 77/505 (15%)
Query: 45 TASSAAAAAEDPITPPVKVDYTQLLINGQFVD---SASGKTFPTLDPRTGDVITHVAEGE 101
AAA I P + N + V+ + T + +A+
Sbjct: 490 AIVRPQAAAHPRIPLPCD-LFAPERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADAT 548
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
+ + AV+AAR F W R A R+ + + A LLE + AL + GK +
Sbjct: 549 PDQAHAAVAAARAGFAG--WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDD 606
Query: 162 SAQTEVPMTTRLFRYYAGWADKIQ------------------------GLTAPADGPYH- 196
A +E+ RYYA K+ +P + P
Sbjct: 607 -ALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAI 665
Query: 197 ------------------------------VQTLHEPIGV-AGVLNIVSGYGPTAGAALA 225
V LHE G+ L +V+G G GAAL
Sbjct: 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHE-AGIPKSALYLVTGDGR-IGAALT 723
Query: 226 SHMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAH 283
+H ++ + FTGST + + + A + + P+ E GG + I A ++ A+
Sbjct: 724 AHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV 783
Query: 284 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 343
+ F + GQ C A FV E V D+ +E A + +GDP GP ID E +
Sbjct: 784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQ 843
Query: 344 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403
++ +I A+L G +G ++ P +F + +E+FGP+ +++Y+
Sbjct: 844 RLDAHIARM-KTEARLHFAGPA--PEGCFVAPHIFELTEAG--QLTEEVFGPILHVVRYR 898
Query: 404 --DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGG 459
+L+ V++ + YGL GV + D+ ++ ++VG++++N PFGG
Sbjct: 899 PENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGG 958
Query: 460 YKQSGQG-REKGSYSLSNYLQVKAV 483
SG G + G + L+ + + V
Sbjct: 959 NGLSGTGPKAGGPHYLARFATEQTV 983
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 7e-76
Identities = 120/463 (25%), Positives = 194/463 (41%), Gaps = 73/463 (15%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ ING++V+S + + ++P T +V+ V ED++ A A +AF W ++
Sbjct: 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKT--WSKVA 63
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R++I+ F LL +H +E+A L T +NGK ++ A EV + AG +
Sbjct: 64 VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKE-ALGEVGRGIENVEFAAGAPSLMM 122
Query: 186 GLTAPADGP-YHVQTLHEPIGV-------------------------------------- 206
G + + PIGV
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182
Query: 207 -----------AG----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
AG V N+V G + H E+ ++F GS G+ V + ++
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 311
NLK V G K+ IV DA+++ A F + G+ C A + V E + D+F+
Sbjct: 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 312 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKG 370
K +G+ G+ GP I + ++ L YI G++ GA+L G G
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360
Query: 371 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430
Y++ PT+F V +M I KDEIF PV S+++ K+L E I+ +N S++ A +FT N +
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNA 420
Query: 431 ANTLMRALRVGSVWINCFDVFDAAIP-------FGGYKQSGQG 466
+ G + IN +P F G+K S G
Sbjct: 421 IRYFRENIDAGMLGIN------LGVPAPMAFFPFSGWKSSFFG 457
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 241 bits (618), Expect = 6e-74
Identities = 113/486 (23%), Positives = 196/486 (40%), Gaps = 77/486 (15%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
SS + + + I+G+ V SG+ +P TG+V VA D+
Sbjct: 8 SSGVDLGTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLA 67
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
AV +A+ A + W R+++ ++F LL + +E+A + + ++GK + A+ +
Sbjct: 68 AAVESAKAAQPK--WAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDD-AKGD 124
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGV------------------- 206
+ + + G + GP + ++ +P+G+
Sbjct: 125 IVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFA 184
Query: 207 ------------------------------AG----VLNIVSGYGPTAGAALASHMEVDK 232
AG +LN+V+G A A+ +H ++
Sbjct: 185 PAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAA 243
Query: 233 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 292
++F GST + V AA N K G K+ I+ DAD+D+AA A + + G+
Sbjct: 244 VSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGE 302
Query: 293 CCCAGSRT-FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 351
C A S V E ++ ++K + +G GP + E ++I I S
Sbjct: 303 RCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDS 362
Query: 352 GVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407
G++ GAKL G G++I +F V DM I K EIFGPV S+++ ++ +E
Sbjct: 363 GIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEE 422
Query: 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIP-------FGGY 460
+ +YG ++T + D A + +G V +N IP FGG+
Sbjct: 423 ALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVN------VPIPVPLAYHSFGGW 476
Query: 461 KQSGQG 466
K S G
Sbjct: 477 KSSSFG 482
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 234 bits (598), Expect = 1e-70
Identities = 109/484 (22%), Positives = 180/484 (37%), Gaps = 82/484 (16%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
++ + V + L P + + +NRA+ AA A E W
Sbjct: 66 CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPM 121
Query: 127 YERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R+++ L+ AD+L E+ A GK Q+ FR+ A +A +++
Sbjct: 122 ADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELE 181
Query: 186 ------------------------------------GLTA------------PAD----- 192
L P+D
Sbjct: 182 GEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLA 241
Query: 193 GPYHVQTLHEPIGV-AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251
+ L E G+ ++ V GPT G + S + + FTGS T K + + A+
Sbjct: 242 SYAVYRILRE-AGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300
Query: 252 S-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 306
+ + E GGK+ V ADVD + F GQ C A SR +V +S+
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360
Query: 307 YDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSG-VDGGAKLETGGE 364
+ Q + + VGDP + G ID++ F +I K++ + GG+
Sbjct: 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ 420
Query: 365 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNA-SQYGLAA 421
+ GYY++P + I K+EIFGPV ++ Y D E ++ ++ + YGL
Sbjct: 421 CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTG 480
Query: 422 GVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKGSYSLS 475
VF + R LR G+ +IN ++ PFGG + SG + G
Sbjct: 481 AVFAQDKAIVQEATRMLRNAAGNFYINDKST--GSVVGQQPFGGARASGTNDKPGGP--- 535
Query: 476 NYLQ 479
+Y+
Sbjct: 536 HYIL 539
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 225 bits (575), Expect = 2e-68
Identities = 52/300 (17%), Positives = 98/300 (32%), Gaps = 29/300 (9%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
++ + AL H ++ + TG K AA S+ KP G P
Sbjct: 164 KDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVP 218
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326
++ E AD+ +A + F+ G C + V + VYD+ E+ + +
Sbjct: 219 VVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTD 278
Query: 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 386
+++ ID KI+ + + E G ++ A + V D
Sbjct: 279 AD-KVRKVLLIDGALNAKIVGQPATAI-----AEMAGVKVPADTKVLIGEGLGKVSYDDA 332
Query: 387 IAKDEIFGPVQSILKYKDLDEVIQRS----NASQYGLAAGVFTH---NLDTANTLMRALR 439
A E P + + + ++ + ++ G +G++T+ N D ++
Sbjct: 333 FAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMK 391
Query: 440 VGSVWINCFDVFDA---AIPFGGYKQS--GQGREKGSYSLSN-----YLQVKAVVTALKN 489
+ IN F G G G+ N + K V +N
Sbjct: 392 TARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN 451
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 1e-19
Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 4/114 (3%)
Query: 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156
+ +++ ++ +KA +E + + + KI + + +A ++G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58
Query: 157 KPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGVL 210
+ + F Y ++ G+ D T+ EP+G+ +
Sbjct: 59 MGIVE-DKVIKNHFASEFIYNKYKDEQTCGIL-EEDDNLGTMTIAEPVGIICGI 110
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 219 bits (561), Expect = 1e-65
Identities = 66/291 (22%), Positives = 103/291 (35%), Gaps = 30/291 (10%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKS 265
GV +++ G G AL H + + FTGS G+ + L A P ELG +
Sbjct: 232 PGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVN 291
Query: 266 PFIVCEDADVDKAAELAH---YALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKR 321
P + +A +A L +L GQ C V E D+F A K
Sbjct: 292 PMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKV 351
Query: 322 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 381
GI + + +F K E + G P +F
Sbjct: 352 APQTMLTDGIAKAYRDGQARFAT---------RNAVKPLLATE---SSGRDASPNLFETT 399
Query: 382 KDDML---IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD--TANTLMR 436
L +E+FGP+ +++ E+ + + Q L A + D TA L
Sbjct: 400 GAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRP 459
Query: 437 AL--RVGSVWINCF----DVFDAAIPFGGYKQSGQGREK--GSYSLSNYLQ 479
L + G V +N F +V D+ + G Y S G+ S+ +L+
Sbjct: 460 VLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLR 510
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 4e-26
Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 20/155 (12%)
Query: 66 TQLLINGQFVDSA-SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM 124
+ L+ G+++D A + + P P A G E VNRA AA +AF +
Sbjct: 30 GKHLVAGEWLDGAGTFASAPAHGPAHD-----FAVGTVELVNRACEAAEEAFWT--YGYS 82
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--- 181
+ ER+ + AD +E + I + + + G P + E TT R +A
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHIEKG 141
Query: 182 -------DKIQGLTAPADGPYHVQTLHEPIGVAGV 209
D PA ++ + P+G V
Sbjct: 142 DYLDRRVDAAMPERQPAPRQ-EIRLVQRPVGPVAV 175
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 2e-59
Identities = 113/455 (24%), Positives = 166/455 (36%), Gaps = 85/455 (18%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
++ AV AR AF G R + + L++ E+ AL D K
Sbjct: 18 SKISEAVKRARAAFSSGRTR--PLQFRIQQLEALQRLIQEQEQELVGALAA-DLHKNEWN 74
Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGVL------- 210
+ EV Y WA P + EP+GV V+
Sbjct: 75 AYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPF 134
Query: 211 ---------------------------------NIVSGY-----------GPTAGAALAS 226
I+ Y G L
Sbjct: 135 NLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLK 194
Query: 227 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 286
D + +TGST GKI++ AAK +L PVTLELGGKSP V ++ D+D A +
Sbjct: 195 E-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 287 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQF 342
F N GQ C A S+ +Q VE +K+ + + + ++ I + F
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVE-----KLKKSLKEFYGEDAKKSRDYGRIISARHF 307
Query: 343 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 402
++++ I G K+ GG A YI PT+ T V + ++EIFGPV I+
Sbjct: 308 QRVMGLIE-----GQKVAYGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCV 361
Query: 403 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF----DAAIPFG 458
+ L+E IQ N + LA +F+ N ++ G V N DV ++PFG
Sbjct: 362 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN--DVIVHITLHSLPFG 419
Query: 459 GYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 493
G SG G G S + ++ L P
Sbjct: 420 GVGNSGMGSYHGKKSFETFSHRRSC---LVRPLMN 451
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 1e-52
Identities = 39/310 (12%), Positives = 85/310 (27%), Gaps = 46/310 (14%)
Query: 207 AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 266
G ++ ++ L H + + TG + K AA S+ P G P
Sbjct: 169 KGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGP 223
Query: 267 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK--------ANALA 318
+ A++ +A + + F+ G C + V + + + +
Sbjct: 224 AFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAE 283
Query: 319 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF 378
++ + P I + + I V A++ E
Sbjct: 284 AVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEE-------------- 329
Query: 379 TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY----GLAAGVFTHNLDTANTL 434
T V + ++ E P+ + + E + S Y G + + + +
Sbjct: 330 TKVGAKIPYSR-EKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREF 388
Query: 435 MRALRVGSVWINCFDVFDAA-----------IPFGGYKQSGQGREKGSYSLSNYLQVKAV 483
V + +N + G S G N ++ +
Sbjct: 389 ALKKPVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPE---NLFNIRRI 445
Query: 484 VTALKNPAWL 493
T + +
Sbjct: 446 ATGVLELEDI 455
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 9e-13
Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 6/109 (5%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
++V + +A KA E M+ + I+ AD +++A + + G Q
Sbjct: 12 QEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQD 69
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGVL 210
+ + ++ + ++ + + V + P+GV L
Sbjct: 70 KVIKNVFAS---KHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGL 115
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 4e-50
Identities = 96/443 (21%), Positives = 159/443 (35%), Gaps = 77/443 (17%)
Query: 92 DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AAL 150
D H+ ++ SA + F R + + R + + + + + +AL
Sbjct: 17 DDDKHMNYLSPAKIDSLFSAQKAYFATRATA--DVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGV 206
D GKP + E+ + W + + P + EP GV
Sbjct: 75 AE-DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGV 133
Query: 207 AGVL----------------------------------------NIVSGY---------- 216
++ I++
Sbjct: 134 TYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQ 193
Query: 217 -GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 275
G + L S D + FTGS GK+V+Q AAK +L PV LELGGK P IV DAD+
Sbjct: 194 GGRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADL 251
Query: 276 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 335
D+ + F N GQ A +VH SV D +E + V G
Sbjct: 252 DQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLE-----RLVERVKTELPEINSTGK 306
Query: 336 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGP 395
+ Q ++++ + ++ G + + TV GV+ + + +E+FGP
Sbjct: 307 LVTERQVQRLVSLLE---ATQGQVLVGSQA-DVSKRALSATVVDGVEWNDPLMSEELFGP 362
Query: 396 VQSILKYKDLDEVIQRSNASQ-YGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--- 451
+ +L++ + I + N LA VF ++D A ++ ++ G +N V
Sbjct: 363 ILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVN--GVMLHA 420
Query: 452 -DAAIPFGGYKQSGQGREKGSYS 473
+PFGG SG G G +S
Sbjct: 421 FSPYLPFGGIGASGMGEYHGHFS 443
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 493 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 89.73 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-96 Score=771.52 Aligned_cols=427 Identities=43% Similarity=0.729 Sum_probs=407.3
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
++..++||||+|+.+.++++++++||+||++|++++.++.+|+++||++|++||+ .|+++|..+|.++|++++++|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999988899999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------- 207 (493)
|.++|++++++|+|||+.+++..|+..+++.++||+++++++.+...+...+...++.++|+|||
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999999866799999999999999999888777766777889999999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 899999998889999999999999999999999999998755
Q ss_pred hhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 250 ~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
+..++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 44489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
++++||+++..+++++.++|++++++|+++++||.... .+|+|++||||.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 99999999999999999999999999999999998653 36899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.++|++||+.|+|++
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999999999987778899999999999999999999999999999999
Q ss_pred eCCCCC
Q 011130 486 ALKNPA 491 (493)
Q Consensus 486 ~~~~~~ 491 (493)
++.+++
T Consensus 482 ~~g~~~ 487 (490)
T 2wme_A 482 ELGDYA 487 (490)
T ss_dssp ECSCCC
T ss_pred ECCCCC
Confidence 986653
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-91 Score=736.41 Aligned_cols=425 Identities=37% Similarity=0.635 Sum_probs=404.2
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHc--cCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~--~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
..++||||+|+.+.++++++++||+||++|++++.++.+|+++|+++|++|| + .|++++..+|.++|++++++|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 4578999999988788999999999999999999999999999999999999 7 89999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv-------------- 207 (493)
+.++|++++++|+|||+.+++. |+..+++.++|++++++++.+...+.. .+...++.++|+|||
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 9999999999999999999985 999999999999999988776655543 456788999999999
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 89999999888899999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 998 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
+++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999997642 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999999
Q ss_pred EeCCC--CCCC
Q 011130 485 TALKN--PAWL 493 (493)
Q Consensus 485 ~~~~~--~~~~ 493 (493)
++... ..||
T Consensus 508 ~~~~~~~~~~~ 518 (520)
T 3ed6_A 508 TNTNPQLVNWF 518 (520)
T ss_dssp EESSCCCCCCS
T ss_pred EcCCCCccCcc
Confidence 98753 3565
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-90 Score=731.29 Aligned_cols=421 Identities=34% Similarity=0.537 Sum_probs=402.0
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEe-eeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~PlGVv-------------- 207 (493)
+.++|++++++|+|||+.+++ .|+..+++.++|++++++++.+...+...+...++.+ +|+|||
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999998 5999999999999999998877765544456778889 999998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 89999999888899999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 988 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
+++++||++++.+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999986444 799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
||+++|+++|||+++|||+|.+.++++++++++|+||||++....+.+||||+|+||+|+++|++++++|++.|+|+++.
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999999999999999999999999999999998888889999999999999999999999999999998763
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-91 Score=732.67 Aligned_cols=418 Identities=36% Similarity=0.593 Sum_probs=399.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||..+++. |+..+++.++|++.+++++.+...+.. .+...++.++|+|||
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999985 999999999999999888766655533 456788999999998
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 8999999988889999999999999999999999999999998
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999987555799999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
++|+++|||+++|||+|.++++++++++++|+||||+.....+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999777788999999999999999999999999999999875
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-90 Score=731.73 Aligned_cols=420 Identities=32% Similarity=0.554 Sum_probs=399.6
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
...++||||+|+.+.++ +++++||+||+++++++.++.+|+++||++|++||+ .|++++..+|.++|++++++|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 100 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKE 100 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 44689999999987666 999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE---------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv--------------- 207 (493)
.++|++++++|+|||..++...|+..+++.++|++++++++.+...+. ..+...++.++|+|||
T Consensus 101 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (498)
T 4f3x_A 101 ADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW 180 (498)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHH
Confidence 999999999999999999933599999999999999998877665442 2456788999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 260 (498)
T 4f3x_A 181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA 260 (498)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH
Confidence 9999999988889999999999999999999999999999999
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++
T Consensus 261 ~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~ 339 (498)
T 4f3x_A 261 K-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTE 339 (498)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGG
T ss_pred h-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcccc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCC-EEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
+++||++++.+++++.++|++++++|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 419 (498)
T 4f3x_A 340 NEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAV 419 (498)
T ss_dssp CSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHH
T ss_pred CccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHH
Confidence 999999999999999999999999999 9999998765689999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|++++
T Consensus 420 ~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 420 AWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 999999999999999999999999999999999999998877899999999999999999999999999999998764
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-90 Score=730.79 Aligned_cols=425 Identities=43% Similarity=0.732 Sum_probs=404.0
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHc--cCCCCCCCCHHHHHHHHHHHHHHHH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLE 141 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~--~~~~w~~~~~~~R~~iL~~la~~l~ 141 (493)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|++++++|+
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLIL 99 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHHH
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 45899999999887889999999999 99999999999999999999999999 6 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-------------
Q 011130 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------- 207 (493)
Q Consensus 142 ~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------- 207 (493)
++.++|++++++|+|||..++. .|+..+++.++|++++++++.+...+.. .+...++.++|+|||
T Consensus 100 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 100 ARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 9999999999999999999995 5999999999999999988776655544 456789999999999
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 8999999988889999999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.
T Consensus 259 ~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 337 (528)
T 3u4j_A 259 IAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPL 337 (528)
T ss_dssp HHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTT
T ss_pred HHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCC
Confidence 9988 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
++++++||++++.+++++.++|++++++|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 338 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 417 (528)
T 3u4j_A 338 NERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTAD 417 (528)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHH
Confidence 99999999999999999999999999999999999986544 79999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 418 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 497 (528)
T 3u4j_A 418 EAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497 (528)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999988
Q ss_pred CC-CCCCC
Q 011130 487 LK-NPAWL 493 (493)
Q Consensus 487 ~~-~~~~~ 493 (493)
.. ..+||
T Consensus 498 ~~~~~~~~ 505 (528)
T 3u4j_A 498 LGRPAPWF 505 (528)
T ss_dssp SSCCCCSC
T ss_pred CCCCCCcc
Confidence 64 22454
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-90 Score=724.76 Aligned_cols=422 Identities=53% Similarity=0.921 Sum_probs=399.2
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~-~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|++++..+|.++|++++++|++|.
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987677899999999999999999999999999999999999743 6999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
++|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 999999999999999987656999999999999999988776654444455678999999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh-
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA- 250 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~- 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 8999999988889999999999999999999999999999998
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|++
T Consensus 261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 419 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976544699999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~ 488 (493)
++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 420 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 420 RANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccC
Confidence 999999999999999999999999999999999999987777899999999999999999999999999999988753
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-89 Score=725.37 Aligned_cols=429 Identities=38% Similarity=0.697 Sum_probs=402.9
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC---CCCCCCHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADL 139 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~---~w~~~~~~~R~~iL~~la~~ 139 (493)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+++ .|++++..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344578999999988788999999999999999999999999999999999999743 79999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccC-C---CCCCceeEEEeeeeeeE--------
Q 011130 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P---ADGPYHVQTLHEPIGVA-------- 207 (493)
Q Consensus 140 l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~---~~~~~~~~~~~~PlGVv-------- 207 (493)
|++|.++|++++++|+|||+.++.. |+..+++.++|++.+++++.+... + ...+...++.++|+|||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 9999999999999999999999975 999999999999999887765431 1 11346788999999999
Q ss_pred ---------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHH
Q 011130 208 ---------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 242 (493)
Q Consensus 208 ---------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g 242 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 89999999888899999999999999999999999
Q ss_pred HHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcc
Q 011130 243 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322 (493)
Q Consensus 243 ~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 322 (493)
+.|++.++. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999988 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEE
Q 011130 323 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 400 (493)
Q Consensus 323 vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 400 (493)
+|||.++++++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 999999999999999999999999999999999999999997654 579999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhc
Q 011130 401 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 480 (493)
Q Consensus 401 ~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~ 480 (493)
+|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++|++.
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~ 482 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCe
Confidence 99999999999999999999999999999999999999999999999877788999999999999999999999999999
Q ss_pred eEEEEeCCC--CCCC
Q 011130 481 KAVVTALKN--PAWL 493 (493)
Q Consensus 481 k~v~~~~~~--~~~~ 493 (493)
|+|++.+.. +.||
T Consensus 483 k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 483 KQVTQYISEEPWGWY 497 (503)
T ss_dssp EEEEEECCSSCCCCS
T ss_pred EEEEEeCCCCccccc
Confidence 999998643 3464
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-90 Score=729.02 Aligned_cols=420 Identities=42% Similarity=0.778 Sum_probs=397.0
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+.++++++++||+||++|++++.++.+|+++||++|++||+.|.|+++|..+|.++|++++++|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 36899999998666789999999999999999999999999999999999986569999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC----CCCceeEEEeeeeeeE--------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~PlGVv-------------- 207 (493)
+|++++++|+|||+.+++..|+..+++.++|++++++++.+...+. ......++.++|+|||
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 9999999999999999874599999999999999998876655443 2233578999999999
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999877889999999999999999999999999999
Q ss_pred Hh-hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 249 AA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 249 a~-~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
++ + ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 98 7 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCC--H
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--L 405 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~ 405 (493)
|+++++||+++..+++++.++|++++++|+++++||......|+|++||||.+++++|++++||+||||++|++|+| +
T Consensus 356 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~ 435 (517)
T 2o2p_A 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDV 435 (517)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCH
Confidence 99999999999999999999999999999999999986544699999999999999999999999999999999999 9
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
||||+++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|++
T Consensus 436 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~ 515 (517)
T 2o2p_A 436 DAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515 (517)
T ss_dssp HHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEe
Confidence 99999999999999999999999999999999999999999987778899999999999999999999999999999987
Q ss_pred e
Q 011130 486 A 486 (493)
Q Consensus 486 ~ 486 (493)
+
T Consensus 516 ~ 516 (517)
T 2o2p_A 516 E 516 (517)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-90 Score=728.68 Aligned_cols=417 Identities=37% Similarity=0.620 Sum_probs=398.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+ .|++++..+|.++|++++++|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.. .+...++.++|+|||
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999986 999999999999999988766654433 346788999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 8999999888889999999999999999999999999999999
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||++++.+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999975 3689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++.|+|++.+
T Consensus 426 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 426 QANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999998777889999999999999999999999999999998875
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-89 Score=724.98 Aligned_cols=423 Identities=33% Similarity=0.535 Sum_probs=399.6
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
.+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIRE 87 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHT
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887789999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv-------------- 207 (493)
+.++|++++++|+|||..+++. |+..+++.++|++.+++++.+...+. ..+...++.++|+|||
T Consensus 88 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 166 (497)
T 3k2w_A 88 NKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAG 166 (497)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHH
Confidence 9999999999999999999984 99999999999999988877665443 2456788999999998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~ 246 (497)
T 3k2w_A 167 RKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKT 246 (497)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 89999999888899999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 328 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~ 328 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.+
T Consensus 247 aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~ 325 (497)
T 3k2w_A 247 SAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMD 325 (497)
T ss_dssp HTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 998 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc--cCC--CCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 329 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 329 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
+++++||+++..+++++.++|++++++|+++++||.. .+. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 326 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (497)
T 3k2w_A 326 ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSS 405 (497)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred CCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCC
Confidence 9999999999999999999999999999999999973 332 689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
+||||+++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 406 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~ 485 (497)
T 3k2w_A 406 MEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVY 485 (497)
T ss_dssp HHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred EeCCC
Q 011130 485 TALKN 489 (493)
Q Consensus 485 ~~~~~ 489 (493)
+++..
T Consensus 486 ~~~~~ 490 (497)
T 3k2w_A 486 INEAE 490 (497)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 88643
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-89 Score=720.83 Aligned_cols=420 Identities=36% Similarity=0.600 Sum_probs=397.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|.|+++|..+|.++|++++++|+++.
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999876778999999999999999999999999999999999997556999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------------- 207 (493)
++|++++++|+|||+.+++..|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998745999999999999999988777654433344678999999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 89999999 88899999999999999999999999999999998
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++++
T Consensus 247 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 325 (495)
T 3b4w_A 247 -MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAA 325 (495)
T ss_dssp -TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTC
T ss_pred -cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 326 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 405 (495)
T 3b4w_A 326 QIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAI 405 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHH
Confidence 999999999999999999999999999999997643 369999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+++|+++|||+++|||+|.++++++++++++|+||||+++ ..+.+||||+|+||+|+++|.+++++|++.|+|++.+
T Consensus 406 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 406 AIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 9999999999999999999999999999999999999987 7789999999999999999999999999999998864
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-89 Score=720.82 Aligned_cols=421 Identities=58% Similarity=0.969 Sum_probs=397.9
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC-CCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~-~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|++++..+|.++|++++++|++|.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987678899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------ 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------ 207 (493)
+|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987656999999999999999888766544444445678999999999
Q ss_pred -----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh-h
Q 011130 208 -----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-K 251 (493)
Q Consensus 208 -----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~-~ 251 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++ +
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 8999999988889999999999999999999999999999999 6
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 411 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 411 (493)
++||+++..+++++.++|++++++|+++++||...+..|+|++||||.+++++|++++||+||||++|++|+|+||||++
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 419 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999764446999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCC
Q 011130 412 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 488 (493)
Q Consensus 412 ~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~ 488 (493)
+|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 420 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 420 ANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999988753
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-89 Score=725.74 Aligned_cols=416 Identities=38% Similarity=0.676 Sum_probs=397.1
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|++
T Consensus 12 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 89 (517)
T 3r31_A 12 QPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRE 89 (517)
T ss_dssp CCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHH----hcCccCCCCCCceeEEEeeeeeeE-----------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVA----------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~PlGVv----------- 207 (493)
+.++|++++++|+|||..++ |+..+++.++|+++++++ +.+...+...+. .++.++|+|||
T Consensus 90 ~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 90 RNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp THHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999999887 899999999999999988 777655544445 89999999998
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 89999999 88899999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 245 ~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 323 (517)
T 3r31_A 245 AAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGD 323 (517)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc-cC---CCCceeeceEEecCCCCccccccccccceEEEEE
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-LG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 401 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~-~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 401 (493)
|.|+++++||++++.+++++.++|++++++|+++++|| . .+ ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 324 PLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp TTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 99999999999999999999999999999999999999 4 22 3799999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhce
Q 011130 402 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481 (493)
Q Consensus 402 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 481 (493)
|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|+||+|+++|++++++|++.|
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred EEEEeC
Q 011130 482 AVVTAL 487 (493)
Q Consensus 482 ~v~~~~ 487 (493)
+|+++.
T Consensus 483 ~v~~~~ 488 (517)
T 3r31_A 483 TVYVST 488 (517)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999875
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-89 Score=716.07 Aligned_cols=418 Identities=35% Similarity=0.620 Sum_probs=398.5
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||..+++. |+..+++.++|++.+..+..+...+.. .+...++.++|+|||
T Consensus 87 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 99999999999999999985 999999999999998877666554432 356788999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 8999999988889999999999999999999999999999999
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999999986555689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999999999999999877788999999999999999999999999999999875
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-89 Score=717.13 Aligned_cols=427 Identities=31% Similarity=0.533 Sum_probs=390.4
Q ss_pred cCCCCCCCCCC-ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHH
Q 011130 53 AEDPITPPVKV-DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSK 131 (493)
Q Consensus 53 ~~~~~~~~~~~-~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~ 131 (493)
++.+...+..+ +..++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+ .|++++..+|.+
T Consensus 12 ~~~~~~~~~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~ 89 (497)
T 3i44_A 12 LEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLG 89 (497)
T ss_dssp ----------CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHH
T ss_pred hhhhhcCCcccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHH
Confidence 34444444444 467899999999887788999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEE-eeeeeeE---
Q 011130 132 IILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVA--- 207 (493)
Q Consensus 132 iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~PlGVv--- 207 (493)
+|++++++|+++.++|++++++|+|||+.+++..|+..+++.++++++..+.......+. .+...++. ++|+|||
T Consensus 90 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I 168 (497)
T 3i44_A 90 FVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLI 168 (497)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEE
Confidence 999999999999999999999999999999984599999999999998876654332221 13345677 9999998
Q ss_pred --------------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEec
Q 011130 208 --------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTG 237 (493)
Q Consensus 208 --------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTG 237 (493)
|++|+|++.+.++++.|+.||+||+|+|||
T Consensus 169 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTG 248 (497)
T 3i44_A 169 TPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTG 248 (497)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEES
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeC
Confidence 899999998888999999999999999999
Q ss_pred CcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHH
Q 011130 238 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 317 (493)
Q Consensus 238 s~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 317 (493)
|+.+|+.|++.+++ ++||+++|||||||+||++||| +.|++.++.++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 249 S~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (497)
T 3i44_A 249 STRAGKDISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDI 326 (497)
T ss_dssp CHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHH
Confidence 99999999999998 8999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCc-ccC--CCCceeeceEEecCCCCcccccccccc
Q 011130 318 AMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFG 394 (493)
Q Consensus 318 ~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fg 394 (493)
++++++|||.|+++++||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||
T Consensus 327 ~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 406 (497)
T 3i44_A 327 AEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFG 406 (497)
T ss_dssp HHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccC
Confidence 99999999999999999999999999999999999999999999994 332 269999999999999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 011130 395 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSL 474 (493)
Q Consensus 395 Pvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l 474 (493)
||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+||||. ....+.+||||+|+||+|+++|.+++
T Consensus 407 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl 485 (497)
T 3i44_A 407 PVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGI 485 (497)
T ss_dssp SEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHH
T ss_pred ceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999995 55678899999999999999999999
Q ss_pred HhhhhceEEEE
Q 011130 475 SNYLQVKAVVT 485 (493)
Q Consensus 475 ~~~~~~k~v~~ 485 (493)
++|++.|+|+.
T Consensus 486 ~~~t~~K~v~~ 496 (497)
T 3i44_A 486 KEFLDTKAISY 496 (497)
T ss_dssp HTTEEEEEESC
T ss_pred HHhcceeEEEe
Confidence 99999999853
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-89 Score=716.77 Aligned_cols=417 Identities=35% Similarity=0.609 Sum_probs=394.4
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997655 8899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.++...|+..+++.++|++++++++.+...+.. .+...++.++|+|||
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999998755999999999999999888766544432 234678899999998
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999888889999999999999999999999999999998
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++
T Consensus 260 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 338 (495)
T 1wnd_A 260 -SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 338 (495)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred -cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCC-CEEEeCCc-ccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~g-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
++|||+++.+++++.++|++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 339 ~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 417 (495)
T 1wnd_A 339 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 417 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999 99999997 43 368999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 418 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 418 NWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999999999999999999999999999999877778999999999999999999999999999999875
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-89 Score=719.46 Aligned_cols=419 Identities=37% Similarity=0.658 Sum_probs=396.2
Q ss_pred ccccceeCCEeeeCCCCCe-eeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
...++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3457899999998766788 99999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE---------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------- 207 (493)
|.++|++++++|+|||+.++.. |+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 9999999999999999999875 999999999999999988766544333334678899999998
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|++.+ ++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 8999999977 8899999999999999999999999999999
Q ss_pred hhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 250 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 250 ~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+
T Consensus 254 a~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 98 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc--C----CCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
++++||++++.+++++.++|++++++|+++++||... + ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 9999999999999999999999999999999999764 2 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++.|+|
T Consensus 413 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v 492 (503)
T 1a4s_A 413 TEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTV 492 (503)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEE
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999999999
Q ss_pred EEeC
Q 011130 484 VTAL 487 (493)
Q Consensus 484 ~~~~ 487 (493)
+++.
T Consensus 493 ~~~~ 496 (503)
T 1a4s_A 493 IVEM 496 (503)
T ss_dssp EECC
T ss_pred EEcc
Confidence 8864
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-88 Score=717.60 Aligned_cols=417 Identities=40% Similarity=0.688 Sum_probs=396.7
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|++|.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE-----------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv----------------- 207 (493)
+|++++++|+|||+.+++ .|+..+++.++|++++++++.+...+. ..+...++.++|+|||
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999998 599999999999999998877765443 3345678899999998
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 89999999777889999999999999999999999999999998
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--------CCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~ 421 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence 999999999999999999999999999999997643 2699999999999 9999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++...+.+||||+|+||+|+++|.+++++|++.|+|
T Consensus 422 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v 501 (515)
T 2d4e_A 422 DEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI 501 (515)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEE
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999999999
Q ss_pred EEeC
Q 011130 484 VTAL 487 (493)
Q Consensus 484 ~~~~ 487 (493)
++.+
T Consensus 502 ~~~~ 505 (515)
T 2d4e_A 502 ALPL 505 (515)
T ss_dssp EEES
T ss_pred EEcC
Confidence 9875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-88 Score=716.70 Aligned_cols=415 Identities=34% Similarity=0.494 Sum_probs=392.2
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887789999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC--C----CceeEEEeeeeeeE-----------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVA----------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~PlGVv----------- 207 (493)
++|++++++|+|||..+++. |+..+++.++|++++++++.+...+.. . +...++.++|+|||
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999986 999999999999999888766543322 1 45678899999999
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 89999999878899999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 99876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
|. +++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 9999999999999999999999999999999999974 6899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++. ..+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 401 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~ 480 (505)
T 3prl_A 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480 (505)
T ss_dssp HHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEE
Confidence 999999999999999999999999999999999999999999866 4588999999999999999999999999999999
Q ss_pred EeCCC
Q 011130 485 TALKN 489 (493)
Q Consensus 485 ~~~~~ 489 (493)
++...
T Consensus 481 ~~~~~ 485 (505)
T 3prl_A 481 LNLAE 485 (505)
T ss_dssp EEC--
T ss_pred EeCCC
Confidence 88643
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-88 Score=712.05 Aligned_cols=418 Identities=32% Similarity=0.565 Sum_probs=395.7
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999876778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.++. .|+..+++.++|++++++++.+...+.. .+...++.++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999988 4999999999999998887766654432 244678999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 8999999977788999999999999999999999999999999
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCC-C
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-G 329 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~-~ 329 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|||.| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 8 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 409 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 409 (493)
++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 322 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi 401 (479)
T 2imp_A 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAI 401 (479)
T ss_dssp SCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999999997643468999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 410 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 410 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 402 ~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 402 SMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 99999999999999999999999999999999999999877778999999999999999999999999999999764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-88 Score=717.26 Aligned_cols=416 Identities=32% Similarity=0.546 Sum_probs=396.2
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
.+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999997 778999999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHh-hHHhcCccCCCCCCceeEEEeeeeeeE---------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~PlGVv--------------- 207 (493)
.++|++++++|+|||+.++.. |+..+++.++|++++ .+...+...+...+...++.++|+|||
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999998 666777666554567789999999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 899999998888999999999999999999999999999999
Q ss_pred hhcC------CCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc
Q 011130 250 AKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323 (493)
Q Consensus 250 ~~~~------~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v 323 (493)
+. + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 6 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 324 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
|||.|+++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEEC-CcCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN-~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~ 480 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|||| ++... .+.+||||+|+||+| +++|.++|++|++.
T Consensus 430 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~ 509 (538)
T 3qan_A 430 DFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA 509 (538)
T ss_dssp SHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCe
Confidence 9999999999999999999999999999999999999999999 55554 789999999999999 99999999999999
Q ss_pred eEEEEeC
Q 011130 481 KAVVTAL 487 (493)
Q Consensus 481 k~v~~~~ 487 (493)
|+|+++.
T Consensus 510 k~v~~~~ 516 (538)
T 3qan_A 510 KTVSEMY 516 (538)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998875
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-88 Score=716.27 Aligned_cols=422 Identities=25% Similarity=0.398 Sum_probs=396.3
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4567899999999887789999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE--------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv-------------- 207 (493)
+.++|++++++|+|||+.+++. |+..+++.++|++++.+.+.+...+. ..+...++.++|+|||
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999985 99999999999999887776654332 2345678999999998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|++. .+.++.|+.||+||+|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 899999994 5567899999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecch-hHHHHHHHHHHHHhhcccCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.
T Consensus 260 aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 998 89999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc----CCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
++++++||+++..+++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 999999999999999999999999999999999999753 2479999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~ 480 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+||||++..+ .+.+||||+|+||+| +++|++++++|++.
T Consensus 419 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~ 498 (521)
T 4e4g_A 419 NYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRT 498 (521)
T ss_dssp SHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheE
Confidence 999999999999999999999999999999999999999999997654 478999999999999 79999999999999
Q ss_pred eEEEEeCCC
Q 011130 481 KAVVTALKN 489 (493)
Q Consensus 481 k~v~~~~~~ 489 (493)
|+|+++...
T Consensus 499 K~v~~~~~~ 507 (521)
T 4e4g_A 499 KTITSRWPS 507 (521)
T ss_dssp EEEEECCCC
T ss_pred EEEEEecCc
Confidence 999987643
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-87 Score=708.00 Aligned_cols=420 Identities=33% Similarity=0.519 Sum_probs=380.6
Q ss_pred CCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHH
Q 011130 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (493)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l 140 (493)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 445667899999999887889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC--CCceeEEEeeeeeeE-----------
Q 011130 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVA----------- 207 (493)
Q Consensus 141 ~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~PlGVv----------- 207 (493)
+++.++|++++++|+|||..+++. |+..+++.++|++++.+++.+ ..+.. .+...++.++|+|||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999986 999999999999998877666 44432 346788999999998
Q ss_pred -------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHH
Q 011130 208 -------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 244 (493)
Q Consensus 208 -------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 244 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 8899999987889999999999999999999999999
Q ss_pred HHHHHhhc-CCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc
Q 011130 245 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323 (493)
Q Consensus 245 v~~~a~~~-~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v 323 (493)
|++.+++. ++||+++|||||||+||++|||++.|++.++.++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988641 57999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 324 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
|||.++++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 482 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 401 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp SHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999999998654 6889999999999999999999999999999
Q ss_pred EEEeC
Q 011130 483 VVTAL 487 (493)
Q Consensus 483 v~~~~ 487 (493)
|+++.
T Consensus 481 v~~~~ 485 (508)
T 3r64_A 481 IGIKR 485 (508)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99885
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-87 Score=705.08 Aligned_cols=419 Identities=29% Similarity=0.475 Sum_probs=375.2
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 346889999999877889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC--CCceeEEEeeeeeeE--------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVA-------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~PlGVv-------------- 207 (493)
.++|++++++|+|||+.+++. |+..+++.++|++++.+++.+...+.. .+...++.++|+|||
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999986 999999999999999888777655532 346788999999999
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 8999999987779999999999999999999999999999
Q ss_pred HHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCC
Q 011130 248 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 327 (493)
Q Consensus 248 ~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~ 327 (493)
.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.
T Consensus 242 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9988 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
|+++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 397 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQE 397 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHH
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976 689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
||+++|+++|||+++|||+|.+.++++++++++|+||||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 398 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 477 (485)
T 4dng_A 398 AIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQ 477 (485)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEE
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999998654 68899999999999999999999999999999988
Q ss_pred CCC
Q 011130 487 LKN 489 (493)
Q Consensus 487 ~~~ 489 (493)
+..
T Consensus 478 ~~~ 480 (485)
T 4dng_A 478 KQY 480 (485)
T ss_dssp C--
T ss_pred cCC
Confidence 643
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-87 Score=704.70 Aligned_cols=414 Identities=34% Similarity=0.567 Sum_probs=392.8
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ 145 (493)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999753 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE-----------------
Q 011130 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA----------------- 207 (493)
Q Consensus 146 ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv----------------- 207 (493)
+|++++++|+|||+.++.. |+..+++.++|++++++++.+...+. ..+...++.++|+|||
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999985 99999999999999988877665443 2345678999999999
Q ss_pred ------------------------------------eEEEeee---CCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ------------------------------------GVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ------------------------------------gvv~vv~---~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|++|+|+ |.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 8999999 7677789999999999999999999999999999
Q ss_pred HhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhh-cccCCCC
Q 011130 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF 327 (493)
Q Consensus 249 a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~vg~p~ 327 (493)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|||.
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 998 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc-eeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 328 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 328 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
++++++||+++..+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999764 3689 99999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999999999999999877778899999999999999999999999999999875
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-87 Score=700.87 Aligned_cols=405 Identities=29% Similarity=0.527 Sum_probs=379.4
Q ss_pred ceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 011130 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (493)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~el 147 (493)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 56 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE--------------------
Q 011130 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA-------------------- 207 (493)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv-------------------- 207 (493)
++++++|+|||..+++. |+..+++.++|++++++++.+...+.. +...++.++|+|||
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999985 999999999999999988776655543 56788999999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 8899999988888999999999999999999999999999875
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||+++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999999 99999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.+.++++++++++|+|+||+++.. .+.+||||+|+||+|+++|.+++++|++.|+|+++.
T Consensus 387 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 387 IANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999999999998653 358999999999999999999999999999998875
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-87 Score=700.63 Aligned_cols=401 Identities=26% Similarity=0.442 Sum_probs=385.8
Q ss_pred eeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhh
Q 011130 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161 (493)
Q Consensus 82 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~ 161 (493)
+++++||+||++|++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++.++|++++++|+|||..+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE----------------------------------
Q 011130 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA---------------------------------- 207 (493)
Q Consensus 162 a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv---------------------------------- 207 (493)
++ .|+..+++.++|++++++++.+...+...+...++.++|+|||
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 4999999999999999988877655544566889999999998
Q ss_pred -------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceE
Q 011130 208 -------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 268 (493)
Q Consensus 208 -------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~i 268 (493)
|++|+|++.+.++++ |+.||+||+|+||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 899999998778888 9999999999999999999999999998 8999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 011130 269 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 348 (493)
Q Consensus 269 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~ 348 (493)
|++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.|+++++||+++..+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 349 i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999999986556899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 429 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+.++++++++++|+||||++....+.+||||+|+||+|+++|++++++|++.|+|+++.
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 99999999999999999998778899999999999999999999999999999999875
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-86 Score=701.71 Aligned_cols=417 Identities=27% Similarity=0.454 Sum_probs=392.0
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
+.+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 4678999999994 678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE---------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv--------------- 207 (493)
.++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999999986 5999999999999998877766544432 334567889999999
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 88999999 78889999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
|.++++++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 335 PWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred cccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 99999999999999999999999999999999999999864456999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHH--HhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 482 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 482 (493)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|+||+|+++|.+++++|++.|+
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~ 494 (500)
T 2j6l_A 415 EEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494 (500)
T ss_dssp HHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEE
Confidence 999999999999999999999999999999 779999999998654 34789999999999999999999999999999
Q ss_pred EEEeC
Q 011130 483 VVTAL 487 (493)
Q Consensus 483 v~~~~ 487 (493)
|++++
T Consensus 495 v~~~~ 499 (500)
T 2j6l_A 495 CTINY 499 (500)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98753
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-87 Score=701.09 Aligned_cols=414 Identities=37% Similarity=0.618 Sum_probs=369.7
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 456899999999988889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE----------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv---------------- 207 (493)
.++|++++++|+|||+.++...|+..+++.++|++++++++.+... ....++.++|+|||
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999999546999999999999999888765432 23568899999998
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 8999999988889999999999999999999999999999988
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 330 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 330 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|||.+++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc-C--CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 407 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 407 (493)
+++||+++..+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~e 398 (478)
T 3ty7_A 319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDE 398 (478)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHH
Confidence 999999999999999999999999999999999432 2 4799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEE
Q 011130 408 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 408 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 485 (493)
||+++|+++|||+++|||+|.+.++++++++++|+|+||+ +...+.+||||+|+||+|+++|.+++++||+.|+|+.
T Consensus 399 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 399 AIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 9999999999999999999999999999999999999999 6667889999999999999999999999999999874
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-86 Score=696.03 Aligned_cols=421 Identities=29% Similarity=0.458 Sum_probs=393.8
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|.
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999876778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC-CCCCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.+...+ ...+...++.++|+|||
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999999987 49999999999999877776655433 12344678899999999
Q ss_pred -------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHh
Q 011130 208 -------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250 (493)
Q Consensus 208 -------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~ 250 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 89999998 5678999999999999999999999999999998
Q ss_pred hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCe-eEecchhHHHHHHHHHHHHhhcccCCCCCC
Q 011130 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 329 (493)
Q Consensus 251 ~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~ 329 (493)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 8 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHH
Q 011130 330 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408 (493)
Q Consensus 330 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 408 (493)
++++||+++..+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ea 398 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999997432 36899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhhceEEEE
Q 011130 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 409 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~ 485 (493)
|+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|+||+| +++|.+++++|++.|+|+.
T Consensus 399 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~ 478 (486)
T 1t90_A 399 IEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478 (486)
T ss_dssp HHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999986433 478999999999999 8999999999999999999
Q ss_pred eCCCCC
Q 011130 486 ALKNPA 491 (493)
Q Consensus 486 ~~~~~~ 491 (493)
+..+|.
T Consensus 479 ~~~~~~ 484 (486)
T 1t90_A 479 RYPAPD 484 (486)
T ss_dssp ECCCCC
T ss_pred ecCCCC
Confidence 887764
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-86 Score=695.73 Aligned_cols=411 Identities=31% Similarity=0.472 Sum_probs=386.7
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|++|.
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 79 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDK 79 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 457899999997543 899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CC----cee-EEEeeeeeeE-----------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVA----------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~PlGVv----------- 207 (493)
++|++++++|+|||+.++.. |+..+++.++|++++++++.+...+.. .+ ... ++.++|+|||
T Consensus 80 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 80 EKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 99999999999999999874 999999999999998887665543322 23 355 8999999999
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 238 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHH
Confidence 89999998777789999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++||
T Consensus 239 ~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 239 GKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 99876 699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCH
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 405 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 405 (493)
|.+ ++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999 999999999999999999999999999999999975 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECC-cCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEE
Q 011130 406 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484 (493)
Q Consensus 406 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~-~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 484 (493)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+ +....+.+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 471 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEE
Confidence 999999999999999999999999999999999999999999 6666789999999999999999999999999999998
Q ss_pred EeC
Q 011130 485 TAL 487 (493)
Q Consensus 485 ~~~ 487 (493)
+.+
T Consensus 472 ~~~ 474 (475)
T 1euh_A 472 FDI 474 (475)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-86 Score=699.47 Aligned_cols=429 Identities=28% Similarity=0.408 Sum_probs=397.2
Q ss_pred cCCCCCCCCCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHH
Q 011130 53 AEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKI 132 (493)
Q Consensus 53 ~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~i 132 (493)
++--++....+..+++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+. .|+++|..+|.++
T Consensus 6 ~~~~~~~~~~~~~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~ 82 (501)
T 1uxt_A 6 LEGVIKEKGGVPVYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAV 82 (501)
T ss_dssp GTTTSEEETTEEEECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHH
T ss_pred HHHHHHHhcCCcccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHH
Confidence 34444445555567899999999753 78999999999999999999999999999999999862 4999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC---CC--CceeEEEeeeeeeE
Q 011130 133 ILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVA 207 (493)
Q Consensus 133 L~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~PlGVv 207 (493)
|++++++|++|.++|++++++|+|||+.++. .|+..+++.++|++++++++.+...+. .. ....++.++|+|||
T Consensus 83 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv 161 (501)
T 1uxt_A 83 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVV 161 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEE
Confidence 9999999999999999999999999999998 599999999999999998876654443 22 33678999999999
Q ss_pred -----------------------------------------------------eEEEeeeCCccchhhhhhccccccEEE
Q 011130 208 -----------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLA 234 (493)
Q Consensus 208 -----------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~ 234 (493)
|++|+|++.+ ++++.|+.||+||+|+
T Consensus 162 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~ 240 (501)
T 1uxt_A 162 AAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVS 240 (501)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEE
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEE
Confidence 8999999977 8899999999999999
Q ss_pred EecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHH
Q 011130 235 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 314 (493)
Q Consensus 235 fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l 314 (493)
||||+.+|+.|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 241 FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 317 (501)
T 1uxt_A 241 FTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 317 (501)
T ss_dssp EESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHH
Confidence 9999999999999876 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC-ceeeceEEecCC---CCcccccc
Q 011130 315 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKD 390 (493)
Q Consensus 315 ~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~i~~~ 390 (493)
+++++++++|||.|+++++||++++.+++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++|
T Consensus 318 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~e 394 (501)
T 1uxt_A 318 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKR 394 (501)
T ss_dssp HHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHS
T ss_pred HHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhC
Confidence 999999999999999999999999999999999999999999999999975 58 999999999999 99999999
Q ss_pred ccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCc-CCCCCCCCccCCCCCCCCCcc
Q 011130 391 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYKQSGQGREK 469 (493)
Q Consensus 391 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~-~~~~~~~pfGG~~~SG~G~~~ 469 (493)
|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++ ....+.+||||+|+||+|+++
T Consensus 395 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~ 474 (501)
T 1uxt_A 395 EVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 474 (501)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBS
T ss_pred cccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999997 566789999999999999999
Q ss_pred hHHHHHhhhhceEEEEeC-CCCCC
Q 011130 470 GSYSLSNYLQVKAVVTAL-KNPAW 492 (493)
Q Consensus 470 g~~~l~~~~~~k~v~~~~-~~~~~ 492 (493)
|.+++++|++.|+|++.+ ..+.|
T Consensus 475 G~~~l~~f~~~k~v~~~~~~~~~~ 498 (501)
T 1uxt_A 475 IGYAVEAVTAYKTIVFNYKGKGVW 498 (501)
T ss_dssp TTTTHHHHEEEEEEEEECTTSSSS
T ss_pred hHHHHHHhCceeEEEEecCCCccc
Confidence 999999999999999876 33444
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-85 Score=693.73 Aligned_cols=413 Identities=32% Similarity=0.522 Sum_probs=387.3
Q ss_pred ccceeCCEeeeCCCCCeeeeecCC-CCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
+++||||+|+. ++.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|++|.
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999996 46789999999 6999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC--CCCCceeEEEeeeeeeE---------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~PlGVv--------------- 207 (493)
++|++++++|+|||+.+++ .|+..+++.++|++++++++.+...+ ...+...++.++|+|||
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999998 49999999999999999888775432 22345678899999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 899999998888899999999999999999999999999998
Q ss_pred h------hcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc
Q 011130 250 A------KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 323 (493)
Q Consensus 250 ~------~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v 323 (493)
+ + ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 273 a~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 273 GRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp TSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 8 5 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeC
Q 011130 324 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 403 (493)
Q Consensus 324 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 403 (493)
||| ++++++|||+++.+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999998 8999997533469999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhc
Q 011130 404 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQV 480 (493)
Q Consensus 404 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~ 480 (493)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+++++|++.
T Consensus 430 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~ 509 (516)
T 1uzb_A 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCe
Confidence 99999999999999999999999999999999999999999998644 3578999999999999 58999999999999
Q ss_pred eEEEEe
Q 011130 481 KAVVTA 486 (493)
Q Consensus 481 k~v~~~ 486 (493)
|+|+++
T Consensus 510 k~v~~~ 515 (516)
T 1uzb_A 510 KAVAER 515 (516)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 999875
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-85 Score=699.58 Aligned_cols=423 Identities=25% Similarity=0.361 Sum_probs=391.3
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
..+++||||+|+.+ +..+.++||.| |++|++++.++.+|+++||++|++||+ .|++++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 45789999999974 35678999998 899999999999999999999999999 99999999999999999999999
Q ss_pred h-HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCC-CCceeEEEeeeeeeE-------------
Q 011130 143 H-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVA------------- 207 (493)
Q Consensus 143 ~-~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~PlGVv------------- 207 (493)
+ +++|++++++|+|||+.++...|+..+++.++|++.+++++.+...... .....+.++.|+|||
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 8 9999999999999999999864499999999999999988877543222 234456677888998
Q ss_pred ---------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHH
Q 011130 208 ---------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248 (493)
Q Consensus 208 ---------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~ 248 (493)
|+||+|++.+.++++.|+.||+|++|.||||+.+|+.|++.
T Consensus 218 ~~~~apALaGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 218 NLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhhcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 89999999888899999999999999999999999999999
Q ss_pred HhhcCCCc------eeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcc
Q 011130 249 AAKSNLKP------VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322 (493)
Q Consensus 249 a~~~~~~p------v~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 322 (493)
+++ ++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 298 aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~ 376 (563)
T 4e3x_A 298 VAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIK 376 (563)
T ss_dssp HHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred HHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhcc
Confidence 998 7874 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCccccCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEE
Q 011130 323 VGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 400 (493)
Q Consensus 323 vg~p-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 400 (493)
+||| .|+++++||++++.+++++.++|+++++ .|+++++||...+..|+|++|||+.+++++|++++||+||||++|+
T Consensus 377 vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~ 456 (563)
T 4e3x_A 377 VGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVY 456 (563)
T ss_dssp BSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEE
T ss_pred CCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEE
Confidence 9999 9999999999999999999999999996 8999999998766689999999999999999999999999999999
Q ss_pred EeCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHHhcc--eeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHH
Q 011130 401 KYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSY 472 (493)
Q Consensus 401 ~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~ 472 (493)
+|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+||||+.++. .+.+||||+|.||+| +++|++
T Consensus 457 ~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~ 536 (563)
T 4e3x_A 457 VYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPH 536 (563)
T ss_dssp EECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTT
T ss_pred EECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHH
Confidence 9997 79999999 789999999999999999999999976 999999997643 578999999999998 899999
Q ss_pred HHHhhhhceEEEEeCCCCC
Q 011130 473 SLSNYLQVKAVVTALKNPA 491 (493)
Q Consensus 473 ~l~~~~~~k~v~~~~~~~~ 491 (493)
+|++|++.|+|...+..|.
T Consensus 537 ~l~~~~~~k~v~~~~~~~~ 555 (563)
T 4e3x_A 537 YILRWTSPQVIKETHKPLG 555 (563)
T ss_dssp GGGGGBCCEEEEEECSCCC
T ss_pred HHHHhCceEEEEEeCcCCC
Confidence 9999999999999875443
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-84 Score=679.69 Aligned_cols=404 Identities=29% Similarity=0.467 Sum_probs=383.9
Q ss_pred CCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 011130 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (493)
Q Consensus 79 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~ 158 (493)
+..+++++||+||++|++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+++.++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 567799999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------
Q 011130 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------- 207 (493)
Q Consensus 159 ~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------- 207 (493)
..+++. |+..+++.++|++++.+++.+.......+...++.++|+|||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999985 999999999999999888776553222345678999999999
Q ss_pred ----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCC
Q 011130 208 ----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 265 (493)
Q Consensus 208 ----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~ 265 (493)
|++|+|++ +.+.+..|+.||+|++|+||||+.+|+.|++.+++ ++||+++||||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 89999998 56778899999999999999999999999999998 8999999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHH
Q 011130 266 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 345 (493)
Q Consensus 266 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~ 345 (493)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.++++|||.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEec
Q 011130 346 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 425 (493)
Q Consensus 346 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 425 (493)
.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999986666899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 426 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 426 ~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+|.+.++++++++++|+||||++....+.+||||+|+||+|+++|.+++++|++.|+|+++.
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999998877889999999999999999999999999999998753
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-82 Score=669.37 Aligned_cols=408 Identities=29% Similarity=0.409 Sum_probs=382.6
Q ss_pred cceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 011130 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (493)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~e 146 (493)
++||||+|+.+ ++.++.++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999975 357899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------
Q 011130 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------- 207 (493)
|++++++|+|||+.+++. |+..+++.++|++.+.+++.+...+...+...++.++|+|||
T Consensus 84 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999985 999999999999998888776654322344567779999999
Q ss_pred ----------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcC
Q 011130 208 ----------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 253 (493)
Q Consensus 208 ----------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~ 253 (493)
|++|+|++ +.+.++.|+.||+||+|+||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 89999998 67889999999999999999999999999999988 8
Q ss_pred CCce-eEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchh-HHHHHHHHHHHHhhcccCC-CCCCC
Q 011130 254 LKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGG 330 (493)
Q Consensus 254 ~~pv-~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~vg~-p~~~~ 330 (493)
++|+ ++|||||||+||++|||+|.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++++++++|+ |.|++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 9998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 331 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 331 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
+++||+++..+++++.++|++++++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999998666689999999999 999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||++ ++++|++.|+|++..
T Consensus 400 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999999999999999999999999999765 3578999999999974 489999999988774
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-82 Score=665.09 Aligned_cols=408 Identities=27% Similarity=0.411 Sum_probs=376.5
Q ss_pred CCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 011130 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (493)
Q Consensus 78 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk 157 (493)
.+.++++++||+||+++++++.++.+|+++||++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhccHHHHHHHHHHHHHhhHHhcCccC-CCC-CCceeEEEeeeeeeE----------------------------
Q 011130 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PAD-GPYHVQTLHEPIGVA---------------------------- 207 (493)
Q Consensus 158 ~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~-~~~~~~~~~~PlGVv---------------------------- 207 (493)
+... . .|+..++..+++++.++.++..... +.. .....+..++|+|||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8654 3 4999999999999988776554322 212 334566788999998
Q ss_pred -------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecC
Q 011130 208 -------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 262 (493)
Q Consensus 208 -------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelg 262 (493)
|++|+|++ +.+.+..|+.| +|+|+||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 89999998 56778888876 8999999999999999999998 8999999999
Q ss_pred CCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHH
Q 011130 263 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 342 (493)
Q Consensus 263 G~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~ 342 (493)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEeCCcccC-CCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEE
Q 011130 343 EKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 421 (493)
Q Consensus 343 ~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 421 (493)
+++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 394 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSA 394 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeE
Confidence 9999999999999999999997543 468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC---CCCCCC
Q 011130 422 GVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL---KNPAWL 493 (493)
Q Consensus 422 ~v~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~~---~~~~~~ 493 (493)
+|||+|.++++++++++++|+|+||++.. ..+..||||+|.||+| +++|.+++++|++.|+|+++. ..|-||
T Consensus 395 ~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 395 AVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp EEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 99999999999999999999999998654 3578999999999998 789999999999999999885 445565
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-81 Score=701.82 Aligned_cols=417 Identities=30% Similarity=0.504 Sum_probs=392.3
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCC-CCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
..++||||+|+. ++++++++||+| ++++++++.++.+|+++||++|++||+ .|+.+|..+|.++|++++++|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 468899999996 578999999998 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCC-CCCceeEEEeeeeeeE---------------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVA--------------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~PlGVv--------------- 207 (493)
+++|++++++|+|||..++.. |+..+++.++||+.+++++.+...+. ..+...++.++|+|||
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999985 99999999999999998877654332 3455678899999999
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 899999998888999999999999999999999999999998
Q ss_pred hh-----cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccC
Q 011130 250 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 324 (493)
Q Consensus 250 ~~-----~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg 324 (493)
+. .++||+++|+|||||+||++|||++.|++.++.++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 325 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 325 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
+|.++++++||+|++.+++++.++|++++++| ++++||..++..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d 924 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC
Confidence 99999999999999999999999999999988 99999976554599999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhce
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 481 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k 481 (493)
+||||+++|+++|||+++|||+|.+.++++++++++|+||||+.++. .+.+||||+|.||+| +++|++++++|++.|
T Consensus 925 ~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k 1004 (1026)
T 4f9i_A 925 FDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPR 1004 (1026)
T ss_dssp HHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEE
T ss_pred HHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEE
Confidence 99999999999999999999999999999999999999999997653 478999999999999 579999999999999
Q ss_pred EEEEeC
Q 011130 482 AVVTAL 487 (493)
Q Consensus 482 ~v~~~~ 487 (493)
+|++..
T Consensus 1005 ~v~~~~ 1010 (1026)
T 4f9i_A 1005 VVTENT 1010 (1026)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-80 Score=659.37 Aligned_cols=411 Identities=24% Similarity=0.329 Sum_probs=371.1
Q ss_pred ccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHH-ccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+++|..+|.++|++++++|++|.
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 57899999997544 579999999999999999988 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCcc-------CCCC--CCceeEEEeeee-eeE-------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-------APAD--GPYHVQTLHEPI-GVA------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-------~~~~--~~~~~~~~~~Pl-GVv------- 207 (493)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+.. .+.. .....+..++|+ |||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999985 99999999999999887765321 1221 122457889997 998
Q ss_pred -----------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcH
Q 011130 208 -----------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 240 (493)
Q Consensus 208 -----------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~ 240 (493)
|++|+|++.+.++++.| +++|+|+||||+.
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~ 239 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD 239 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence 77999998654433333 5799999999999
Q ss_pred HHHHHHHHHh--hcCCCceeEecCCCCceEEccCC-----CHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHH
Q 011130 241 TGKIVLQLAA--KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 313 (493)
Q Consensus 241 ~g~~v~~~a~--~~~~~pv~lelgG~~p~iV~~da-----Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~ 313 (493)
+|+.|++.++ + ++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 240 ~G~~i~~~aa~a~-~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 240 TAATLRAHPAFVQ-RGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHTSHHHHT-TCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHhhhhhc-CCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 9999998764 5 899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC------CCCceeeceEEecCCCC--c
Q 011130 314 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDD--M 385 (493)
Q Consensus 314 l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~--~ 385 (493)
|+++++++++|||.|+++++||++++.+++++.++|+++ .+|+++++||.... ..|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 68999999997421 36899999999999877 6
Q ss_pred cccccccccceEEEEEeC---CH-----HHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc--ceeEEEECCcCC-----
Q 011130 386 LIAKDEIFGPVQSILKYK---DL-----DEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV----- 450 (493)
Q Consensus 386 ~i~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~V~VN~~~~----- 450 (493)
++++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.+.++++++++ ++|+||||++..
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~ 477 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQT 477 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCC
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccccc
Confidence 899999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ----CCCCCCccCCCCCCCCCc-chHHHHHhhhhceEEEEe
Q 011130 451 ----FDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 451 ----~~~~~pfGG~~~SG~G~~-~g~~~l~~~~~~k~v~~~ 486 (493)
..+.+||||+|+||+|++ +|.+++++|++.|++...
T Consensus 478 ~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 478 GHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred ccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 357899999999999999 699999999999998764
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-79 Score=639.35 Aligned_cols=392 Identities=25% Similarity=0.394 Sum_probs=348.8
Q ss_pred CeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh
Q 011130 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (493)
Q Consensus 81 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~ 160 (493)
..+++.||.||++|++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+|||..
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4578999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhccHHHHHHHHHHHHHhhHHhcCcc-CCC---CCCceeEEEeeeeeeE-----------------------------
Q 011130 161 QSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVA----------------------------- 207 (493)
Q Consensus 161 ~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~PlGVv----------------------------- 207 (493)
+++..|+..+++.++|+++.++++.... .+. ..+...++.++|+|||
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9985699999999999998887765431 111 1245678999999999
Q ss_pred -----------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCC
Q 011130 208 -----------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 264 (493)
Q Consensus 208 -----------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~ 264 (493)
|++|+|++ +.+.++.|+. ++||+|+||||+.+|+.|++.+++ ++||+++|||||
T Consensus 164 Kps~~tp~t~~~l~~l~~~alP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk 240 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEAFAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGK 240 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHHCCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCC
T ss_pred ECCCCChHHHHHHHHHHHHhCCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCCC
Confidence 89999999 6788889998 789999999999999999999998 899999999999
Q ss_pred CceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHH
Q 011130 265 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 344 (493)
Q Consensus 265 ~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 344 (493)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||++++.++++
T Consensus 241 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~r 315 (457)
T 3lns_A 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQR 315 (457)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHH
T ss_pred CCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987 6666 9999999999999
Q ss_pred HHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHc-CCCCcEEEE
Q 011130 345 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLAAGV 423 (493)
Q Consensus 345 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~v 423 (493)
+.++|+++ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|
T Consensus 316 v~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v 391 (457)
T 3lns_A 316 LVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYV 391 (457)
T ss_dssp HHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEE
T ss_pred HHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEE
Confidence 99999985 36999999753 36899999999999999999999999999999999999999999999 999999999
Q ss_pred ecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 424 FTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 424 ~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
||+|.+.++++++++++|+||||++.. ..+.+||||+|+||+|+++|.+++++|++.|+|++.
T Consensus 392 ~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 392 FGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp ECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred ECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999999999999999999753 468899999999999999999999999999999764
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-77 Score=625.09 Aligned_cols=376 Identities=28% Similarity=0.384 Sum_probs=343.2
Q ss_pred CCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHH
Q 011130 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (493)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 179 (493)
.+.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||..++...|+..++..+++++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 567799999999999999 999999999999999999999999999999999999999999876699999999988876
Q ss_pred hhHHhcCcc----CCCCCCceeEEEeeeeeeE------------------------------------------------
Q 011130 180 WADKIQGLT----APADGPYHVQTLHEPIGVA------------------------------------------------ 207 (493)
Q Consensus 180 ~~~~~~~~~----~~~~~~~~~~~~~~PlGVv------------------------------------------------ 207 (493)
..++..... .....+...++.++|+|||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 655443221 1112234678899999999
Q ss_pred ----eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHH
Q 011130 208 ----GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 283 (493)
Q Consensus 208 ----gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~ 283 (493)
|++|+|+|.+ +.+..|+.| +||+|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.++
T Consensus 173 alP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~ 249 (469)
T 3sza_A 173 YLDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249 (469)
T ss_dssp HSCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHHH
T ss_pred hCCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHHH
Confidence 8999999844 445567777 89999999999999999999998 8999999999999999999999999999999
Q ss_pred HHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCC
Q 011130 284 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 363 (493)
Q Consensus 284 ~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg 363 (493)
+++|.|+||.|++++|||||++++|+|+++|+++++++ +|+|.++++++||++++.+++++.++| +|+++++||
T Consensus 250 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG 323 (469)
T 3sza_A 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGG 323 (469)
T ss_dssp HHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECC
T ss_pred HHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCC
Confidence 99999999999999999999999999999999999988 699999999999999999999999998 589999999
Q ss_pred cccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEE
Q 011130 364 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 443 (493)
Q Consensus 364 ~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V 443 (493)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|
T Consensus 324 ~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V 402 (469)
T 3sza_A 324 TGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGV 402 (469)
T ss_dssp CEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEE
T ss_pred ccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceE
Confidence 864 4689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCcCC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 444 WINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 444 ~VN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
|||++.. ..+.+||||+|+||+|+++|.+++++||+.|+|++..
T Consensus 403 ~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 403 AANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred EEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 9999753 4688999999999999999999999999999998874
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-77 Score=634.99 Aligned_cols=400 Identities=24% Similarity=0.317 Sum_probs=363.0
Q ss_pred CccccceeCCEeeeCCCCCeeeeecCCCCCeEE-EEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHH
Q 011130 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (493)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~ 141 (493)
....++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+ .|++++..+|.++|++++++|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 44568999999997532 89999999998 9999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHh--cCccC----CC---CCCceeEEEeeeeeeE-----
Q 011130 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVA----- 207 (493)
Q Consensus 142 ~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~PlGVv----- 207 (493)
+|.++|++++++|+|||+.+++. |+..+++.++|+++++++. ..... +. ..+...++.++|+|||
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 99999999999999999999885 9999999999999988772 22211 11 1123467899999998
Q ss_pred ------------------------------------------------------eEEEeeeCCccchhhhhhccccccEE
Q 011130 208 ------------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKL 233 (493)
Q Consensus 208 ------------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v 233 (493)
|++|+|++.+.++++.|+.||+||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 88999999888899999999999999
Q ss_pred EEecCcHHHHHHHHHHhhcCC--CceeEecCCCCceEEccCC---CHHHHHHHHHHHHHhhcCCcccCCCeeEecch-hH
Q 011130 234 AFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VY 307 (493)
Q Consensus 234 ~fTGs~~~g~~v~~~a~~~~~--~pv~lelgG~~p~iV~~da---Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~ 307 (493)
+||||+.+|+.|++.+++ ++ ||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999998 88 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCC---
Q 011130 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD--- 384 (493)
Q Consensus 308 d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~--- 384 (493)
|+|+++|+++++++++| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+.++.++
T Consensus 338 d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 99999999999988654 57899998888777777763 479999999975 6999999999988777
Q ss_pred ccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecC--CHHHHHHHHHhcc--eeEEEECCcCC---CCCCCCc
Q 011130 385 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDV---FDAAIPF 457 (493)
Q Consensus 385 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~--d~~~~~~~~~~l~--~g~V~VN~~~~---~~~~~pf 457 (493)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||++++ ..+.+||
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 899999999999999999999999999999999999999999 8899999999998 99999999765 3588999
Q ss_pred cC-CCCCCCCCcc--hHHHHHhhhhceEE
Q 011130 458 GG-YKQSGQGREK--GSYSLSNYLQVKAV 483 (493)
Q Consensus 458 GG-~~~SG~G~~~--g~~~l~~~~~~k~v 483 (493)
|| +|.||+|+++ |++++++|++.|++
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 99 9999999875 99999999999874
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-74 Score=609.79 Aligned_cols=390 Identities=20% Similarity=0.299 Sum_probs=354.5
Q ss_pred CCCCCeeeeecCCCCCeE-EEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 011130 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (493)
Q Consensus 77 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~ 155 (493)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|++|.++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 446788999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCChhhhhhccHHHHHHHHHHHHHhhHH--hcCccC----CCC--CC-ceeEEEeeeeeeE-------------------
Q 011130 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PAD--GP-YHVQTLHEPIGVA------------------- 207 (493)
Q Consensus 156 Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~--~~~~~~----~~~--~~-~~~~~~~~PlGVv------------------- 207 (493)
|||+.++.. |+..+++.++|+++++++ ..+... +.. .+ ...++.++|+|||
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999988864 999999999999998876 333221 111 11 1357899999998
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|++.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 8899999977888999999999999999999999999999
Q ss_pred HHhhcCC--CceeEecCCCCceEEccCCCHH--HHHHHHHHHHHhhcCCcccCCCeeEecch-hHHHHHHHHHHHHhhcc
Q 011130 248 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 322 (493)
Q Consensus 248 ~a~~~~~--~pv~lelgG~~p~iV~~daDl~--~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~ 322 (493)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9988 65 9999999999999999999999 99999999999999999999999999999 99999999999999876
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeeceEEecCCCC---ccccccccccceEE
Q 011130 323 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQS 398 (493)
Q Consensus 323 vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~ 398 (493)
.||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.++.++ |++++||+||||++
T Consensus 319 ----------~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 ----------PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp ----------CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3688999999999999999984 7999999997 2899999999987777 99999999999999
Q ss_pred EEEeCCHHHHHHHHHcCCCCcEEEEecCCH--HHHHHHHHhc--ceeEEEECCcCC---CCCCCCccC-CCCCCCCC--c
Q 011130 399 ILKYKDLDEVIQRSNASQYGLAAGVFTHNL--DTANTLMRAL--RVGSVWINCFDV---FDAAIPFGG-YKQSGQGR--E 468 (493)
Q Consensus 399 v~~~~~~~eai~~~n~~~~gl~a~v~t~d~--~~~~~~~~~l--~~g~V~VN~~~~---~~~~~pfGG-~~~SG~G~--~ 468 (493)
|++|+|+||||+++|+++|||+++|||+|. +.++++++++ ++|+||||+++. +.+.+|||| +|.||+|+ +
T Consensus 385 v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~ 464 (510)
T 1ez0_A 385 IVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS 464 (510)
T ss_dssp EEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS
T ss_pred EEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCC
Confidence 999999999999999999999999999987 7899999999 799999998764 457899999 79999875 4
Q ss_pred chHHHHHhhhhceEEE
Q 011130 469 KGSYSLSNYLQVKAVV 484 (493)
Q Consensus 469 ~g~~~l~~~~~~k~v~ 484 (493)
+|.+++++|++.|.+.
T Consensus 465 ~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 465 VGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSGGGGGGGEEEEEEE
T ss_pred ccHHHHHHhheEEEEc
Confidence 7999999999998764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-73 Score=630.84 Aligned_cols=382 Identities=27% Similarity=0.421 Sum_probs=356.9
Q ss_pred EecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHH
Q 011130 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (493)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~ 176 (493)
|+.++.+|+++||++|++||. .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 889999999999999999999 999999999999999999999999999999999999999999975 99999999999
Q ss_pred HHHhhHHhcCcc--CCCCCCceeEEEeeeeeeE-----------------------------------------------
Q 011130 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVA----------------------------------------------- 207 (493)
Q Consensus 177 ~a~~~~~~~~~~--~~~~~~~~~~~~~~PlGVv----------------------------------------------- 207 (493)
|+.+++++.+.. .+...+...++.++|+|||
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998876643 3333456788899999998
Q ss_pred ------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhc--CCCceeEecCCCCceEEccCCCHHHHH
Q 011130 208 ------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 279 (493)
Q Consensus 208 ------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~--~~~pv~lelgG~~p~iV~~daDl~~aa 279 (493)
|++|+|+|.+.+ ++.|+.||+|++|+||||+.+|+.|++.+++. ++||+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 899999998777 99999999999999999999999999998862 489999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEE
Q 011130 280 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 359 (493)
Q Consensus 280 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v 359 (493)
+.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.++|+++++.| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888 88
Q ss_pred EeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHh
Q 011130 360 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 437 (493)
Q Consensus 360 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 437 (493)
+||..+ +.|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+++++++++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~ 934 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDR 934 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHH
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHh
Confidence 888754 3599999999985 6789999999999999999996 799999999999999999999999999999999
Q ss_pred cceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchHHHHHhhhhceEEEEeC
Q 011130 438 LRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 438 l~~g~V~VN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+++|+||||++... .+.+||||+|.||+| +++|++++++|++.|+|+++.
T Consensus 935 l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 935 VQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999997653 357899999999999 678999999999999998874
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-68 Score=555.56 Aligned_cols=354 Identities=18% Similarity=0.162 Sum_probs=287.8
Q ss_pred eeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------C
Q 011130 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (493)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~-------G 156 (493)
-++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred CChh----hhhhccHHHHHHHHHHHHHhhHHhcCccCCCC---CCceeEEEeeeeeeE----------------------
Q 011130 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVA---------------------- 207 (493)
Q Consensus 157 k~~~----~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~PlGVv---------------------- 207 (493)
||+. ++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~nP~n~p~~~a~ALaaG 166 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESRPDCLPQVAALAIASG 166 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSCTTHHHHHHHHHHHHT
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCCcHHHHHHHHHHHHcC
Confidence 9987 455 5999999999999988877766543321 234568899999998
Q ss_pred --------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCC
Q 011130 208 --------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 255 (493)
Q Consensus 208 --------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~ 255 (493)
|++|+|++ +.++++.|+.||+||+|+||||+.+|+.|++.++ +|
T Consensus 167 N~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~ 242 (463)
T 2h5g_A 167 NGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GI 242 (463)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS---SS
T ss_pred CEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CC
Confidence 36899998 7788999999999999999999999999999876 69
Q ss_pred ceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCcccc
Q 011130 256 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 335 (493)
Q Consensus 256 pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gp 335 (493)
|+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||++++| ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hH
Confidence 9999999999999999999999999999999999 999999999999999998 23
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcC
Q 011130 336 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 415 (493)
Q Consensus 336 li~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 415 (493)
+ ++ +++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+|+||||+++|++
T Consensus 297 ~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~ 359 (463)
T 2h5g_A 297 L-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKY 359 (463)
T ss_dssp H-----HH---HHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred H-----HH---HHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcC
Confidence 2 23 3577788899999855432 2245553 5789999999999999999999999999999999
Q ss_pred CCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhceEEEEeC
Q 011130 416 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 416 ~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G--~~--~g~~~l~~~~~~k~v~~~~ 487 (493)
+|||+++|||+|.+.++++++++++|+||||++....+.+||||+|+||+| ++ +|.+++++|++.|+|++..
T Consensus 360 ~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 360 GSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp CCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999999999999999999999999998777889999999999999 65 9999999999999998864
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-65 Score=535.46 Aligned_cols=367 Identities=14% Similarity=0.188 Sum_probs=320.8
Q ss_pred EEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHH
Q 011130 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (493)
Q Consensus 96 ~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~ 175 (493)
+++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..+++..+...+++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~--- 79 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASK--- 79 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHH---
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHH---
Confidence 4566789999999999999999 99999999999999999999999999999999999999988865434434443
Q ss_pred HHHHhhHHhcC-ccCCCCCCceeEEEeeeeeeE-----------------------------------------------
Q 011130 176 YYAGWADKIQG-LTAPADGPYHVQTLHEPIGVA----------------------------------------------- 207 (493)
Q Consensus 176 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~PlGVv----------------------------------------------- 207 (493)
++..+++.... ...+.+.+...+..++|+|||
T Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~ 159 (464)
T 3k9d_A 80 HVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS 159 (464)
T ss_dssp HHHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred HHHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHH
Confidence 33333332211 111223455678899999998
Q ss_pred ----------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecC-CCCceEEccCCCHH
Q 011130 208 ----------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVD 276 (493)
Q Consensus 208 ----------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelg-G~~p~iV~~daDl~ 276 (493)
|++|+|++++.+.++.|+.||+||+|+||||+.+ ++.++. ++||+ +|+| ||+|+||++|||++
T Consensus 160 ~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHH
Confidence 8899999988889999999999999999999985 444555 88999 7888 99999999999999
Q ss_pred HHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHH-------hhcccCCCC-CCCCccccCCCHHHHHHHHHH
Q 011130 277 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKY 348 (493)
Q Consensus 277 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~vg~p~-~~~~~~gpli~~~~~~~~~~~ 348 (493)
.|++.|++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999985 567889988 788999999999999999999
Q ss_pred HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHH----HHHHcCCCCcEEEEe
Q 011130 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI----QRSNASQYGLAAGVF 424 (493)
Q Consensus 349 i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a~v~ 424 (493)
++.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++||
T Consensus 314 ~~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~ 378 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378 (464)
T ss_dssp TTCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hhhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 99888899999999863 456777765 89999999999999999997 799999999999999
Q ss_pred cCCHHHHHHHHHhcceeEEEECCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeCCC
Q 011130 425 THNLDTANTLMRALRVGSVWINCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 489 (493)
Q Consensus 425 t~d~~~~~~~~~~l~~g~V~VN~~~~---------~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~ 489 (493)
|+|.+.+++|++++++|+|+||++.. ..+.+|||| +.+|.|.++|..++++|++.|+|....+.
T Consensus 379 t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~~ 451 (464)
T 3k9d_A 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVLE 451 (464)
T ss_dssp CSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCCC
T ss_pred eCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCCc
Confidence 99999999999999999999999764 468899998 77899999999999999999999888654
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-65 Score=532.43 Aligned_cols=344 Identities=17% Similarity=0.167 Sum_probs=275.5
Q ss_pred HHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhhccHHH-HHHHHHHHH
Q 011130 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (493)
Q Consensus 104 ~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~----~~a~~~Ev~~-~~~~l~~~a 178 (493)
.+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||. .++...|+.. ++..++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58999999999999 9999999999999999999999999999999999999998 7775458888 889999999
Q ss_pred HhhHHhc------CccCCC---CCCceeEEEeeeeeeE------------------------------------------
Q 011130 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVA------------------------------------------ 207 (493)
Q Consensus 179 ~~~~~~~------~~~~~~---~~~~~~~~~~~PlGVv------------------------------------------ 207 (493)
++++++. +...+. +.+...++.++|+|||
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwNP~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSCTHHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccChHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 8887765 333221 1234568899999998
Q ss_pred -----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 -----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 -----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++|+|+ .++++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||+
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~ 247 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLD 247 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEEC
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEEC
Confidence 5688898 6667899999999999999999999999999865 58999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc---CCCCCCCCccccCCCHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKILK 347 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v---g~p~~~~~~~gpli~~~~~~~~~~ 347 (493)
+|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |||.+ .+
T Consensus 248 ~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~ 308 (468)
T 1vlu_A 248 EDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KT 308 (468)
T ss_dssp TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HH
T ss_pred CCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hc
Confidence 999999999999999999999 99999999999999 9999999999999987 87643 34
Q ss_pred H-HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecC
Q 011130 348 Y-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 426 (493)
Q Consensus 348 ~-i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 426 (493)
+ |++++ ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 309 ~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 375 (468)
T 1vlu_A 309 AYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 375 (468)
T ss_dssp HHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred ccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 5 66664 3667775 4 689887 7889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcceeEEEECCcCCCCCCCCcc-----CCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 427 NLDTANTLMRALRVGSVWINCFDVFDAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 427 d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfG-----G~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
|.+.++++++++++|+|+||++....+..||| |+|.||+|++ |.+++++|++.|+|+...
T Consensus 376 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 376 NKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 99999999999999999999987777889999 9999999999 999999999999998863
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-63 Score=516.16 Aligned_cols=337 Identities=20% Similarity=0.229 Sum_probs=295.6
Q ss_pred CHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh----hhhhh-------ccHHH
Q 011130 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPM 169 (493)
Q Consensus 101 ~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~----~~a~~-------~Ev~~ 169 (493)
.-+++++++++|++||+ .|+++|..+|.++|++++++|++|.++|++++++|+||+. .++.. .|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 34689999999999999 9999999999999999999999999999999999999985 45431 48999
Q ss_pred HHHHHHHHHHhhHHhcCccCCC---CCCceeEEEeeeeeeE---------------------------------------
Q 011130 170 TTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVA--------------------------------------- 207 (493)
Q Consensus 170 ~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~PlGVv--------------------------------------- 207 (493)
+++.+++++++.++ .+...+. ..+...++.++|+|||
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCChHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 99999999998765 3433221 2234568899999999
Q ss_pred ----------------eEEEeeeCC-ccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 ----------------GVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 ----------------gvv~vv~~~-~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|++|+|++. +.++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||+
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEe
Confidence 889999984 456788999999999999999999999999876 48999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
+|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE--------------------------
T ss_pred CCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe--------------------------
Confidence 999999999999999999999 99999999999999999999999999887642
Q ss_pred HHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 011130 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430 (493)
Q Consensus 351 ~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 430 (493)
+.||... .+ |+ ||| ++.++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus 298 ---------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 361 (427)
T 1o20_A 298 ---------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSN 361 (427)
T ss_dssp ---------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred ---------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHH
Confidence 2233321 12 33 885 24578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 011130 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 431 ~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++++++++++|+|+||++....+.+||||.|+||+| +++|++++++|++.|+|+...
T Consensus 362 a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 362 AKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999999999997777788999999999997 578999999999999998864
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-63 Score=513.49 Aligned_cols=338 Identities=19% Similarity=0.205 Sum_probs=285.7
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChh----hhhh-------ccHHHH
Q 011130 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (493)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~----~a~~-------~Ev~~~ 170 (493)
.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 99999999999999999999999999999999999999853 5442 378889
Q ss_pred HHHHHHHHHhhHHhcCccCCC---CCCceeEEEeeeeeeE----------------------------------------
Q 011130 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVA---------------------------------------- 207 (493)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~PlGVv---------------------------------------- 207 (493)
++.+++++.+++.. +...+. ..+...++.++|+|||
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~nP~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSCHHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCCcHHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99999999887643 333221 2345678999999998
Q ss_pred ---------------eEEEeeeCCcc-chhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEcc
Q 011130 208 ---------------GVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 271 (493)
Q Consensus 208 ---------------gvv~vv~~~~~-~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~ 271 (493)
|++|+|++.+. ++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECC
Confidence 88999998665 5788899999999999999999999998764 589999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhccc---CCCCCCCCccccCCCHHHHHHHHHH
Q 011130 272 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKILKY 348 (493)
Q Consensus 272 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~v---g~p~~~~~~~gpli~~~~~~~~~~~ 348 (493)
|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |||. ..++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999988 7653 2456
Q ss_pred HHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCH
Q 011130 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428 (493)
Q Consensus 349 i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 428 (493)
|+++. .| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 320 i~~a~---------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 376 (444)
T 4ghk_A 320 LEAAG---------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDH 376 (444)
T ss_dssp HHHTT---------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBH
T ss_pred HHhcc---------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCH
Confidence 66542 12 11 245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCC----CcchHHHHHhhhhceEEEEeC
Q 011130 429 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 429 ~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 487 (493)
+.++++++++++|+|+||+++.+.+..||||.++||+| +++|++++++|++.|+|++..
T Consensus 377 ~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 377 DRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999999999999999998878889999999999987 688999999999999998764
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-61 Score=502.01 Aligned_cols=361 Identities=17% Similarity=0.242 Sum_probs=292.4
Q ss_pred EecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHH-H
Q 011130 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (493)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l-~ 175 (493)
++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+|||..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999 9999999999999999999999999999999999999999998755666666665 3
Q ss_pred HHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------------------------------------------
Q 011130 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------------------ 207 (493)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------------------ 207 (493)
+++.. +..+ ..+.+.....+..++|+|||
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1111 12223344568899999998
Q ss_pred ---------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHH
Q 011130 208 ---------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 278 (493)
Q Consensus 208 ---------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~a 278 (493)
|++|+|++++.++++.|+.||+|++|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 889999998888999999999999999999998655 3444 78999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCE
Q 011130 279 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 358 (493)
Q Consensus 279 a~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~ 358 (493)
++.++.++|+|+||.|+++++||||+++||+|+++|+++ +||++++.+++++.++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999874 49999999999999999876566777
Q ss_pred EEeCCccc---CCCCceeeceE-------EecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCC----CCcEEEEe
Q 011130 359 LETGGERL---GAKGYYIKPTV-------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVF 424 (493)
Q Consensus 359 v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~v~ 424 (493)
+ +||... ...|+|++||+ +.++.+++++.+ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 6 466532 13589999997 667888999876 89999999999999999999999974 99999999
Q ss_pred cCCHHHHHH---HHHhcceeEEEECCcCCCCCCCCccCCCCC-----------CCC-----CcchHHHHHhhhhceEEEE
Q 011130 425 THNLDTANT---LMRALRVGSVWINCFDVFDAAIPFGGYKQS-----------GQG-----REKGSYSLSNYLQVKAVVT 485 (493)
Q Consensus 425 t~d~~~~~~---~~~~l~~g~V~VN~~~~~~~~~pfGG~~~S-----------G~G-----~~~g~~~l~~~~~~k~v~~ 485 (493)
|+|.+.+++ +++++++|+|+||+++. |||.|.. |.| ...+.-+..++.+.|+|..
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~ 447 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTT------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAK 447 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC----------------------------------CCCCCGGGGEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCC------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEe
Confidence 999877777 99999999999999754 4443321 222 2333456778888898887
Q ss_pred eCCCC
Q 011130 486 ALKNP 490 (493)
Q Consensus 486 ~~~~~ 490 (493)
+.+|+
T Consensus 448 ~~~~~ 452 (452)
T 3my7_A 448 RAENM 452 (452)
T ss_dssp CC---
T ss_pred ecCCC
Confidence 76653
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=89.73 E-value=17 Score=36.17 Aligned_cols=82 Identities=11% Similarity=0.189 Sum_probs=50.6
Q ss_pred EEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhc-ceeEEEECCcCCC--CCC--CCccCCCCCCCCCcchHH
Q 011130 398 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF--DAA--IPFGGYKQSGQGREKGSY 472 (493)
Q Consensus 398 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~V~VN~~~~~--~~~--~pfGG~~~SG~G~~~g~~ 472 (493)
.++.++|++|+++++|..-. -..-|.++|+. .+..++ .+|.|++..+... ..+ -|-.=.+.+|..|..+.-
T Consensus 313 ~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgL 388 (423)
T 4gic_A 313 GMILVDDLEQAAAVANRIAP-EHLELSVESPE---VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPL 388 (423)
T ss_dssp EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH---HHGGGCCCCSEEEEC----------------CCCCTTGGGTCCCC
T ss_pred eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH---HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCC
Confidence 45678999999999998432 35678888875 566777 4999999876431 111 111113345556666666
Q ss_pred HHHhhhhceEE
Q 011130 473 SLSNYLQVKAV 483 (493)
Q Consensus 473 ~l~~~~~~k~v 483 (493)
+.+.|++.-++
T Consensus 389 sv~~F~K~~s~ 399 (423)
T 4gic_A 389 GVYDFQKRSSL 399 (423)
T ss_dssp CGGGGEEEEEE
T ss_pred CHHHeeeeeeE
Confidence 77888776554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 493 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-155 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-154 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-129 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-113 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 6e-99 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-95 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-84 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-77 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 8e-37 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-34 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 8e-13 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 449 bits (1156), Expect = e-155
Identities = 247/490 (50%), Positives = 307/490 (62%), Gaps = 55/490 (11%)
Query: 52 AAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSA 111
A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV A
Sbjct: 1 AVPAPNQQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKA 59
Query: 112 ARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
AR AF G W RM A R +++ R ADL+ER +AALET DNGKP+ S ++ M
Sbjct: 60 ARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV 119
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGV------------------------ 206
+ RYYAGWADK G T P DG + T HEP+GV
Sbjct: 120 LKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAT 179
Query: 207 -----------------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTG 237
GV+NIV G+GPTAGAA+ASH +VDK+AFTG
Sbjct: 180 GNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG 239
Query: 238 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 297
ST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAG
Sbjct: 240 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG 299
Query: 298 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 357
SRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GA
Sbjct: 300 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGA 359
Query: 358 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 417
KL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S Y
Sbjct: 360 KLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTY 419
Query: 418 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 477
GLAA VFT +LD AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y
Sbjct: 420 GLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 479
Query: 478 LQVKAVVTAL 487
+VK V +
Sbjct: 480 TEVKTVTVKV 489
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 446 bits (1147), Expect = e-154
Identities = 228/483 (47%), Positives = 298/483 (61%), Gaps = 55/483 (11%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
P+T + YT++ IN ++ S SGK FP +P T + + V EG+ EDV++AV AAR+A
Sbjct: 5 PLTNL-QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQA 63
Query: 116 FDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G W M A ER +++ + ADL+ER +A +E + GK F + ++ +
Sbjct: 64 FQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTL 123
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGV---------------------------- 206
RY AGWADKIQG T P DG + T EP+GV
Sbjct: 124 RYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTV 183
Query: 207 -------------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 241
GV+NIV GYGPTAGAA++SHM+VDK+AFTGST
Sbjct: 184 VVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEV 243
Query: 242 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 301
GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR F
Sbjct: 244 GKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLF 303
Query: 302 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 361
V ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG GAKLE
Sbjct: 304 VEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLEC 363
Query: 362 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 421
GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+N + YGL+A
Sbjct: 364 GGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSA 423
Query: 422 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 481
G+FT+++D A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y Y +VK
Sbjct: 424 GIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 483
Query: 482 AVV 484
V
Sbjct: 484 TVT 486
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 382 bits (981), Expect = e-129
Identities = 157/492 (31%), Positives = 237/492 (48%), Gaps = 65/492 (13%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF 116
T V V G+ + S G T P +P TG V+ + AE+V++AV +A+ A+
Sbjct: 12 TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAY 71
Query: 117 DEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
+ W +M ERS+++L A ++ D IA LE +N A+ ++ + Y
Sbjct: 72 LK--WSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-GKTITEAEYDIDAAWQCIEY 128
Query: 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGV------------------------------ 206
YAG A + G G T EP+GV
Sbjct: 129 YAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVF 188
Query: 207 -----------------------AGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 243
G++N+V G G G+ L H V K++FTGS TGK
Sbjct: 189 KPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGK 247
Query: 244 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 303
V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ C G+R FV
Sbjct: 248 KVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQ 306
Query: 304 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 363
+ QF+E+ VVGDP + G I Q +K+L ++ GA++ GG
Sbjct: 307 REIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGG 366
Query: 364 ERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 417
E L GY++ P V +DDM K+EIFGPV S+L + +EV+QR+N + +
Sbjct: 367 EPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTF 426
Query: 418 GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 477
GLA+GVFT ++ A+ + L G+ +IN + + +PFGGYK SG GRE G ++ Y
Sbjct: 427 GLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYY 486
Query: 478 LQVKAVVTALKN 489
Q+K V+ + +
Sbjct: 487 SQLKTVIVEMGD 498
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 341 bits (876), Expect = e-113
Identities = 140/473 (29%), Positives = 212/473 (44%), Gaps = 58/473 (12%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+LLING+ V G+ P +P TGDV+ +AE AE V+ AV AA AF E W + T
Sbjct: 3 HKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALET---------------------------WDNGKP 158
R++ +L+ AD++E + A LE+
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLT----------APA-------------DGPY 195
+ + T+ + R G I APA P
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 196 HVQTLHEPIGVA---GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 252
L E GV+NI+ G G T G L H +V ++ TGS TG+ ++ S
Sbjct: 180 TALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTAS 238
Query: 253 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 312
++K +ELGGK+P IV +DAD++ E ++N GQ C A R + + +YD VE
Sbjct: 239 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVE 298
Query: 313 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGY 371
K A G P + GP E++ K + G K+ TGGE+ GY
Sbjct: 299 KLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY 358
Query: 372 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 431
Y PT+ G D I + E+FGPV S+ + + ++V+ +N SQYGLA+ V+T ++ A
Sbjct: 359 YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRA 418
Query: 432 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
+ + L+ G W+N + + +P GG K SG G++ Y L +Y V+ V+
Sbjct: 419 HRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 305 bits (782), Expect = 6e-99
Identities = 133/498 (26%), Positives = 204/498 (40%), Gaps = 70/498 (14%)
Query: 49 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNR 107
A A + Y L I G++VD+ + +L+P +V+ A+ +
Sbjct: 22 AMREALRRVREEFGRHY-PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEA 78
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALET--------------- 152
A+ AA KAF W +RS+++L+ A L+ R E+ A
Sbjct: 79 ALEAAWKAFKT--WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVA 136
Query: 153 ------------------------WDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
G+ E + +
Sbjct: 137 EAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVG 196
Query: 189 APADGPYHVQTLHEPIGV---------------AGVLNIVSGYGPTAGAALASHMEVDKL 233
A G + E V GV+N + G G GA L H + +
Sbjct: 197 PVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFI 256
Query: 234 AFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 288
FTGS G + + A + + K +E GGK+ IV E AD D AAE + +
Sbjct: 257 NFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYG 316
Query: 289 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 348
QGQ C A SR + + Y+ +E+ A + VG P + GP + +EQ K+L Y
Sbjct: 317 FQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSY 375
Query: 349 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 408
I G + G + GG+RL +GY+I PTVFT V IA++EIFGPV S+++ KD E
Sbjct: 376 IEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEA 434
Query: 409 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG 466
++ +N + YGL GV++ + R VG+++ N PFGG+K SG
Sbjct: 435 LEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTN 494
Query: 467 REKGSYS-LSNYLQVKAV 483
+ G+ L +L++KAV
Sbjct: 495 AKTGALDYLRLFLEMKAV 512
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 293 bits (751), Expect = 6e-95
Identities = 124/481 (25%), Positives = 194/481 (40%), Gaps = 70/481 (14%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+ +NG++ S +P +G + V E+V+ ++A+KA W ++
Sbjct: 5 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALSY 60
Query: 127 YERSKIILRFADLLERHNDE---IAALET--------------WDNGKPFEQSAQTEVPM 169
ER+ + + AD+L R ++ I + E + +
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 170 TTRLFRYYAGWADKIQGLTAPADGPYH--------------------------------- 196
+ A KI + G
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 197 --------VQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 248
+ E AGV N ++G G G + H V+ + FTGST G+ + ++
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 249 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 308
A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297
Query: 309 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368
+ VEK + + + P ID++ + + I D GA T +R
Sbjct: 298 ELVEK-IREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 353
Query: 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 428
+G I P +F V DM +A +E FGPV I++ ++E I+ SN S+YGL A +FT++
Sbjct: 354 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 413
Query: 429 DTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487
A + L VG+V IN PF G K+SG G + YS+ VK+VV +
Sbjct: 414 PRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 473
Query: 488 K 488
K
Sbjct: 474 K 474
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 267 bits (683), Expect = 2e-84
Identities = 105/476 (22%), Positives = 166/476 (34%), Gaps = 64/476 (13%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+ G++ S G+ P I V E+V R + K M
Sbjct: 18 PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS-ARDMPG 74
Query: 127 YERSKIILR-----------FADLLER--------------------------------- 142
ER ++ + FA++L
Sbjct: 75 TERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGD 134
Query: 143 --------HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-- 192
E L + P+ + + + + P+
Sbjct: 135 YIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISD 194
Query: 193 --GPYHVQTLHEPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250
G + + + V ++FTGST G+ V+++
Sbjct: 195 PLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG 254
Query: 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 310
+K +ELGG P IV EDAD+D AA+ ++ GQ C A VY +
Sbjct: 255 ---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL 311
Query: 311 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 370
VE+ VGDP + GP I ++++ I V+ G ++ GG RLG
Sbjct: 312 VEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY 371
Query: 371 YYIKP-TVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 429
DM++ K E+F PV S ++ KDLD+ I+ +N YGL A VF ++
Sbjct: 372 VQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 431
Query: 430 TANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 484
+R L VG+++IN PFGG K+SG RE Y++ K +V
Sbjct: 432 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 487
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 248 bits (633), Expect = 1e-77
Identities = 97/436 (22%), Positives = 150/436 (34%), Gaps = 66/436 (15%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE------------------ 146
++ V AR+AF+ + R + + ++ +
Sbjct: 2 ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59
Query: 147 -------------IAALETWDNGKPFEQSAQTE-------------VPMTTRLFRYYAGW 180
I L W +P ++ QT+ V + +
Sbjct: 60 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119
Query: 181 ADKIQGLTAPADGPYHVQT----------LHEPIGVAGVLNIVSGYGPTAGAALASHMEV 230
+ G A + + + G
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERF 179
Query: 231 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 290
D + +TGST GKIV+ AAK +L PVTLELGGKSP V +D D+D A + F N
Sbjct: 180 DHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNS 238
Query: 291 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350
GQ C A S+ +Q VEK G+ K G I+ F+++ I
Sbjct: 239 GQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKGLID 297
Query: 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410
+ G YI PT+ V + ++EIFGPV I+ + L+E IQ
Sbjct: 298 NQK------VAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQ 351
Query: 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGRE 468
N + LA VF++N ++ G V N + +PFGG SG G
Sbjct: 352 FINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAY 411
Query: 469 KGSYSLSNYLQVKAVV 484
G S + ++ +
Sbjct: 412 HGKKSFETFSHRRSCL 427
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 138 bits (347), Expect = 8e-37
Identities = 57/411 (13%), Positives = 106/411 (25%), Gaps = 34/411 (8%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
+++ R+A+D T E++K I + A+ L+ EI D K E+
Sbjct: 1 DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58
Query: 163 -----------AQTEVPMTTRLFRYYAGWADKIQGLTAPADGPY---------HVQTLHE 202
+ + G D + + + +
Sbjct: 59 VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118
Query: 203 PIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 262
+ + + + I L + +
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178
Query: 263 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV--HESVYDQFVEKANALAMK 320
+V E + + L + + V +A K
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238
Query: 321 RV---VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTV 377
V + + EKI K + + R K I P V
Sbjct: 239 AVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDV 298
Query: 378 FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 437
+DD E + +I K++DE I+ G + + T N A +
Sbjct: 299 VPATEDDW---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSE 355
Query: 438 LRVGSVWINCFDVFDAAIPFGGYKQSGQGREK----GSYSLSNYLQVKAVV 484
+ +V++N F FG + G ++ G L K VV
Sbjct: 356 IDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 133 bits (335), Expect = 2e-34
Identities = 66/487 (13%), Positives = 128/487 (26%), Gaps = 94/487 (19%)
Query: 79 SGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKI----- 132
+ F + TG+ + +VN+A +AA K + + R+ +R+ +
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58
Query: 133 ----------------------------ILRFADLLE-----------------RHNDEI 147
I R A+ L N
Sbjct: 59 SELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTR 118
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH------ 201
A L D + V + ++ A
Sbjct: 119 APLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQ 178
Query: 202 -----------EPIGVAGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 250
+ + ++ G G AL SH E+ + FTGS G+ + LA
Sbjct: 179 IVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 238
Query: 251 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAH---YALFFNQGQCCCAGSRTFVHESVY 307
+ G + + A+LA ++ GQ C F +
Sbjct: 239 ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPE 298
Query: 308 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 367
Q + +++ + I +
Sbjct: 299 TQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS---------QAES 349
Query: 368 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 427
+ ++EIFGP I+ +++ +++ S L A +
Sbjct: 350 PCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATE 409
Query: 428 LDT--ANTLMRALR--VGSVWINCF----DVFDAAI---PFGGYKQSGQGREKGSYSLSN 476
D + L+ L G + N + +V A + P+ S G+ ++
Sbjct: 410 EDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIHR 468
Query: 477 YLQVKAV 483
+L+ A
Sbjct: 469 WLRPVAY 475
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 67.9 bits (165), Expect = 8e-13
Identities = 30/220 (13%), Positives = 52/220 (23%), Gaps = 28/220 (12%)
Query: 239 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 298
+++ + PV G + EDAD+ KA ++ A C
Sbjct: 205 PRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNA-ME 263
Query: 299 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 358
++ + N V I + D
Sbjct: 264 TLLINPKFSKWWEVLENLTLEGGVT-------------------------IHATKDLKTA 298
Query: 359 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 418
LG I+ ++ E + + IQ N
Sbjct: 299 YFDKLNELGKLTEAIQCKTVDADEEQDF--DKEFLSLDLAAKFVTSTESAIQHINTHSSR 356
Query: 419 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFG 458
+ T N A M+ + V+ N F +G
Sbjct: 357 HTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYG 396
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 493 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.3e-91 Score=739.50 Aligned_cols=430 Identities=53% Similarity=0.917 Sum_probs=411.4
Q ss_pred CCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC-CCCCCCHHHHHHHHHHHHHH
Q 011130 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL 139 (493)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~-~w~~~~~~~R~~iL~~la~~ 139 (493)
..++++++||||+|+.+.++++++++||+||++|++++.++.+|++.||++|++||+.+ .|+++|.++|.++|++++++
T Consensus 9 ~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~ 88 (494)
T d1bxsa_ 9 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 34667899999999998889999999999999999999999999999999999999742 59999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------
Q 011130 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------ 207 (493)
Q Consensus 140 l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------ 207 (493)
|++|+++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...++.++|+|||
T Consensus 89 L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 168 (494)
T d1bxsa_ 89 IERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchhHH
Confidence 99999999999999999999987666899999999999999999888877877778899999999999
Q ss_pred -----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHH
Q 011130 208 -----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246 (493)
Q Consensus 208 -----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 246 (493)
|++|+|++.++++++.|+.||+|++|.||||+.+|+.|+
T Consensus 169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~ 248 (494)
T d1bxsa_ 169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 899999998888999999999999999999999999999
Q ss_pred HHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCC
Q 011130 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326 (493)
Q Consensus 247 ~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p 326 (493)
+.+++.++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~ 328 (494)
T d1bxsa_ 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred HHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeecc
Confidence 98886579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 327 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
.++++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|.++++|+||||++|++|+|+|
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~ 408 (494)
T d1bxsa_ 329 LTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 408 (494)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred CCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHH
Confidence 99999999999999999999999999999999999998777889999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|+++|||+++|||+|.+.++++++++++|+||||+++..++.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 409 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~ 488 (494)
T d1bxsa_ 409 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 488 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CCCC
Q 011130 487 LKNP 490 (493)
Q Consensus 487 ~~~~ 490 (493)
+...
T Consensus 489 ~~~~ 492 (494)
T d1bxsa_ 489 ISQK 492 (494)
T ss_dssp CSCC
T ss_pred cCCC
Confidence 8553
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1.5e-90 Score=730.99 Aligned_cols=429 Identities=57% Similarity=0.952 Sum_probs=409.9
Q ss_pred CCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCC-CCCCCCHHHHHHHHHHHHHH
Q 011130 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL 139 (493)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~-~w~~~~~~~R~~iL~~la~~ 139 (493)
+.+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+.+ .|++++.++|.++|+++++.
T Consensus 9 p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~ 88 (494)
T d1o04a_ 9 PEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 44677799999999998889999999999999999999999999999999999999632 59999999999999999999
Q ss_pred HHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE------------
Q 011130 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------ 207 (493)
Q Consensus 140 l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------ 207 (493)
|++|+++|++++++|+|||..++...|+..++..++|++.+.++..+...+...+...++.++|+|||
T Consensus 89 l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 89 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHH
Confidence 99999999999999999999998766999999999999999998888877777777889999999999
Q ss_pred -----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHH
Q 011130 208 -----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 246 (493)
Q Consensus 208 -----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~ 246 (493)
|++|+|+|.+.++++.|+.||+|++|.||||+++|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 899999998888999999999999999999999999999
Q ss_pred HHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCC
Q 011130 247 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 326 (493)
Q Consensus 247 ~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p 326 (493)
+.++..++||+++|||||||+||++|||+|.|++.+++++|+++||.|+++++||||++++|+|+++|++++.++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence 88764489999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHH
Q 011130 327 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 406 (493)
Q Consensus 327 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 406 (493)
.++++++||++++.+++++.++|++++++|+++++||....+.|+|++|||+.++++++++++||+||||++|++|+|+|
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~ 408 (494)
T d1o04a_ 329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 408 (494)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999999998877889999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 407 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 407 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.++|++||+.|+|+++
T Consensus 409 eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~ 488 (494)
T d1o04a_ 409 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 488 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEe
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999998
Q ss_pred CCC
Q 011130 487 LKN 489 (493)
Q Consensus 487 ~~~ 489 (493)
++.
T Consensus 489 ~p~ 491 (494)
T d1o04a_ 489 VPQ 491 (494)
T ss_dssp CSC
T ss_pred CCC
Confidence 654
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=2.8e-88 Score=714.26 Aligned_cols=424 Identities=37% Similarity=0.662 Sum_probs=402.6
Q ss_pred CCCCccccceeCCEeeeCCCCCee-eeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHH
Q 011130 60 PVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD 138 (493)
Q Consensus 60 ~~~~~~~~~~I~G~~~~~~~~~~~-~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~ 138 (493)
...+....+||||+|+.+.+|.++ +|+||+||++|++++.++.+|+++||++|++||+ .|++++..+|.++|+++++
T Consensus 14 ~~~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~a~ 91 (503)
T d1a4sa_ 14 SVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAAR 91 (503)
T ss_dssp TCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHH
T ss_pred ceeecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHH
Confidence 334555578999999998777766 6999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-----------
Q 011130 139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA----------- 207 (493)
Q Consensus 139 ~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv----------- 207 (493)
+|++|+++|++++++|+|||+.++.. |+..+++.++|++.+.++..+...+...+...++.++|+|||
T Consensus 92 ~L~~~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~ 170 (503)
T d1a4sa_ 92 IIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFM 170 (503)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHhHHHHHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCChHH
Confidence 99999999999999999999999985 999999999999999988777666666667889999999999
Q ss_pred ------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHH
Q 011130 208 ------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 245 (493)
Q Consensus 208 ------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 245 (493)
|++|+|++ +.++++.|+.||+||+|.||||+++|+.|
T Consensus 171 ~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i 249 (503)
T d1a4sa_ 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKV 249 (503)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 89999999 67899999999999999999999999999
Q ss_pred HHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCC
Q 011130 246 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 325 (493)
Q Consensus 246 ~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~ 325 (493)
++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++++|+++|.+.++++++|+
T Consensus 250 ~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~ 328 (503)
T d1a4sa_ 250 MEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGD 328 (503)
T ss_dssp HHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeecc
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC------CCCceeeceEEecCCCCccccccccccceEEE
Q 011130 326 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 399 (493)
Q Consensus 326 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v 399 (493)
|.+..+++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|
T Consensus 329 ~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v 408 (503)
T d1a4sa_ 329 PLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSV 408 (503)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred ccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEE
Confidence 999999999999999999999999999999999999997431 47899999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhh
Q 011130 400 LKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 479 (493)
Q Consensus 400 ~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~ 479 (493)
++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+||||+++...+.+||||+|+||+|+++|.+++++||+
T Consensus 409 ~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~ 488 (503)
T d1a4sa_ 409 LPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQ 488 (503)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEE
T ss_pred EEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred ceEEEEeCC
Q 011130 480 VKAVVTALK 488 (493)
Q Consensus 480 ~k~v~~~~~ 488 (493)
.|+|++++.
T Consensus 489 ~k~v~~~~~ 497 (503)
T d1a4sa_ 489 LKTVIVEMG 497 (503)
T ss_dssp EEEEEECCS
T ss_pred eEEEEEcCC
Confidence 999999873
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.8e-88 Score=707.90 Aligned_cols=419 Identities=34% Similarity=0.600 Sum_probs=392.6
Q ss_pred cccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 011130 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (493)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~ 144 (493)
++++||||+|+.+ ++++++++||+||++|++++.++.+|+++||++|++||+ .|+++|.++|.++|++++++|++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~ 78 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 78 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence 4689999999975 678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC-CCCCceeEEEeeeeeeE----------------
Q 011130 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVA---------------- 207 (493)
Q Consensus 145 ~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~PlGVv---------------- 207 (493)
++|++++++|+|||+.++...++..+...++|++.+.........+ ...+...++.++|+|||
T Consensus 79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 158 (474)
T d1wnda_ 79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 158 (474)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence 9999999999999999997657777778788777765544433332 22456788999999999
Q ss_pred ------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhh
Q 011130 208 ------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 251 (493)
Q Consensus 208 ------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~ 251 (493)
|++|+|++.++++++.|++||+|++|.||||+++|+.|++.++.
T Consensus 159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~ 238 (474)
T d1wnda_ 159 LAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 238 (474)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhc
Confidence 99999999888999999999999999999999999999999998
Q ss_pred cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCC
Q 011130 252 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 331 (493)
Q Consensus 252 ~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 331 (493)
++||+++|||||||+||++|||++.|++.+++++|+++||.|+++++||||+++||+|+++|+++++++++|+|.++++
T Consensus 239 -~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~ 317 (474)
T d1wnda_ 239 -SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 317 (474)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred -CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCE-EEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHH
Q 011130 332 QQGPQIDSEQFEKILKYIRSGVDGGAK-LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 410 (493)
Q Consensus 332 ~~gpli~~~~~~~~~~~i~~a~~~ga~-v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 410 (493)
.+||+++..+++++.+++++++..|+. ++.|+......|+|++|||+.++.+++++++||+||||++|++|+|.||||+
T Consensus 318 ~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~ 397 (474)
T d1wnda_ 318 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 397 (474)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred eecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHH
Confidence 999999999999999999999999985 5666666667899999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEeC
Q 011130 411 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 487 (493)
Q Consensus 411 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 487 (493)
++|+++|||+++|||+|.+.++++++++++|+||||++..+.+.+||||+|+||+|+++|.+++++||+.|+|+++|
T Consensus 398 ~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 398 WANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp HHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEeC
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999875
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2e-83 Score=679.96 Aligned_cols=416 Identities=32% Similarity=0.519 Sum_probs=384.8
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCC-CCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~ 142 (493)
+++++||||+|+.+ +++++++||. ||++|++++.++.+|+++||++|++||+ .|+++|.++|.++|++++++|++
T Consensus 36 ~~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~ 111 (516)
T d1uzba_ 36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRR 111 (516)
T ss_dssp EEECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 45799999999974 5678999995 7999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC--CCCCceeEEEeeeeeeE-------------
Q 011130 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVA------------- 207 (493)
Q Consensus 143 ~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~PlGVv------------- 207 (493)
+.++|++++++|+|||..++.. |+..+++.+++++.++.+....... .......++.++|+|||
T Consensus 112 ~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~ 190 (516)
T d1uzba_ 112 RKRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF 190 (516)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccc
Confidence 9999999999999999999875 9999999999999988877654332 22355678889999999
Q ss_pred ----------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHH
Q 011130 208 ----------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 247 (493)
Q Consensus 208 ----------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~ 247 (493)
|++|+|+|.++++++.|+.||+|++|.||||+.+|+.|++
T Consensus 191 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~ 270 (516)
T d1uzba_ 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270 (516)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred cccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHH
Confidence 9999999988889999999999999999999999999999
Q ss_pred HHhh-----cCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcc
Q 011130 248 LAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 322 (493)
Q Consensus 248 ~a~~-----~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 322 (493)
.++. .++||+++|||||||+||++|||+|.|++.+++++|.++||.|++++++|||++++|+|++++.+++++++
T Consensus 271 ~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~ 350 (516)
T d1uzba_ 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350 (516)
T ss_dssp HHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcc
Confidence 8872 27899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEe
Q 011130 323 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 402 (493)
Q Consensus 323 vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 402 (493)
+| |.++.+++||+++..+++++.++|+++++.|+.+ +||...+..|+|++||||.+++++++++++|+||||++|++|
T Consensus 351 ~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~ 428 (516)
T d1uzba_ 351 VG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428 (516)
T ss_dssp BS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred cC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEe
Confidence 99 6788999999999999999999999999888755 566666678999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCC--CCCCCCccCCCCCCCCCcc-hHHHHHhhhh
Q 011130 403 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREK-GSYSLSNYLQ 479 (493)
Q Consensus 403 ~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~--~~~~~pfGG~~~SG~G~~~-g~~~l~~~~~ 479 (493)
+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++++ ..+.+||||+|+||+|+++ |.+++++||+
T Consensus 429 ~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~ 508 (516)
T d1uzba_ 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508 (516)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEE
T ss_pred CCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCC
Confidence 999999999999999999999999999999999999999999998754 3468999999999999875 4799999999
Q ss_pred ceEEEEe
Q 011130 480 VKAVVTA 486 (493)
Q Consensus 480 ~k~v~~~ 486 (493)
.|+|+.+
T Consensus 509 ~k~v~~r 515 (516)
T d1uzba_ 509 MKAVAER 515 (516)
T ss_dssp EEEEEEE
T ss_pred eeeEEEc
Confidence 9999865
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=6.1e-80 Score=651.30 Aligned_cols=427 Identities=29% Similarity=0.430 Sum_probs=384.5
Q ss_pred CCCCCCCCccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHH
Q 011130 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILR 135 (493)
Q Consensus 56 ~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~ 135 (493)
.++....+..+++||||+|+. ++++++++||.||+++++++.++.+|+++||++|+++++. .|+++|.++|.++|++
T Consensus 7 ~~~~~~~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~ 83 (499)
T d1ky8a_ 7 VIKEKGGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRK 83 (499)
T ss_dssp TSEEETTEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHH
T ss_pred HHHhcCCCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHH
Confidence 344444566789999999995 6789999999999999999999999999999999887662 4999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC-----CCCCceeEEEeeeeeeE---
Q 011130 136 FADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPIGVA--- 207 (493)
Q Consensus 136 la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~PlGVv--- 207 (493)
++++|+++.++|++++++|+|||..++.. |+..+++.++|++.++++..+.... .......++.++|+|||
T Consensus 84 ~a~~l~~~~~~la~~~~~etGk~~~~a~~-Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I 162 (499)
T d1ky8a_ 84 AADIIERNLDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAI 162 (499)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHhh-hhhcccccccchhhhhhhhhhceeccccccccccccceeeeecccccccc
Confidence 99999999999999999999999999985 9999999999999988876654322 12345678999999999
Q ss_pred --------------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEec
Q 011130 208 --------------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTG 237 (493)
Q Consensus 208 --------------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTG 237 (493)
++++++.+.+ +.+..|+.|+.++.+.|||
T Consensus 163 ~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftG 241 (499)
T d1ky8a_ 163 TPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTG 241 (499)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEES
T ss_pred ccccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeec
Confidence 7888888865 4678899999999999999
Q ss_pred CcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHH
Q 011130 238 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 317 (493)
Q Consensus 238 s~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 317 (493)
|+.+++.+++.++ .+|+++|||||||+||++|||+|.|++.+++++|+++||.|+++++||||++++|+|+++|+++
T Consensus 242 s~~~g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~ 318 (499)
T d1ky8a_ 242 STEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKR 318 (499)
T ss_dssp CHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHH
T ss_pred ccccceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHH
Confidence 9999999998764 4899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEE---ecCCCCcccccccccc
Q 011130 318 AMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF---TGVKDDMLIAKDEIFG 394 (493)
Q Consensus 318 ~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl---~~~~~~~~i~~~E~fg 394 (493)
++++++|+|.|+++++||+++..++++++++|++++.+|+++++||..... .+..++++ .++.+||++++||+||
T Consensus 319 ~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~eE~FG 396 (499)
T d1ky8a_ 319 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP--TYVQPTLVEAPADRVKDMVLYKREVFA 396 (499)
T ss_dssp HHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEET--TEECCEEEECCHHHHTTSHHHHSCCCS
T ss_pred HHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccc--cccccccccccccCCCCChhhhccccC
Confidence 999999999999999999999999999999999999999999999876432 23333333 3345789999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHH
Q 011130 395 PVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYS 473 (493)
Q Consensus 395 Pvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~~-~~~pfGG~~~SG~G~~~g~~~ 473 (493)
||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|+|+||+++... +.+||||+|+||+|+++|.++
T Consensus 397 Pvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 476 (499)
T d1ky8a_ 397 PVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYA 476 (499)
T ss_dssp SEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTT
T ss_pred ceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999976644 789999999999999999999
Q ss_pred HHhhhhceEEEEeCCCC-CC
Q 011130 474 LSNYLQVKAVVTALKNP-AW 492 (493)
Q Consensus 474 l~~~~~~k~v~~~~~~~-~~ 492 (493)
+++||+.|+|+++++++ .|
T Consensus 477 ~~~~~~~k~i~~~~~~~~~~ 496 (499)
T d1ky8a_ 477 VEAVTAYKTIVFNYKGKGVW 496 (499)
T ss_dssp HHHHEEEEEEEEECTTSSSC
T ss_pred HHHhhCEEEEEEcCCCCCCC
Confidence 99999999999997544 55
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=3.9e-76 Score=619.58 Aligned_cols=413 Identities=32% Similarity=0.474 Sum_probs=380.6
Q ss_pred ccccceeCCEeeeCCCCCeeeeecCCCCCeEEEEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011130 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (493)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~ 143 (493)
+.+++||||+|+. ++++++++||+||+++++++.++.+|+++||++|++||+ .|+++|.++|.++|++++++|+++
T Consensus 2 k~~~n~I~G~~~~--~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~ 77 (474)
T d1euha_ 2 KQYKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 77 (474)
T ss_dssp CBCCEEETTEEEC--CSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceecCeecC--CCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 4679999999986 467899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHhcCcc-----C-CCCCCceeEEEeeeeeeE----------
Q 011130 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-----A-PADGPYHVQTLHEPIGVA---------- 207 (493)
Q Consensus 144 ~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-----~-~~~~~~~~~~~~~PlGVv---------- 207 (493)
.++|++++++|+|||..++.. |+...+..++++........... . ....+...++.++|+|||
T Consensus 78 ~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~ 156 (474)
T d1euha_ 78 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156 (474)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence 999999999999999999875 99999999999887654433211 1 122345678899999999
Q ss_pred -------------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHH
Q 011130 208 -------------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 244 (493)
Q Consensus 208 -------------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 244 (493)
|++|+|+++++++++.|+.||+|+.|.||||+.+++.
T Consensus 157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~ 236 (474)
T d1euha_ 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 236 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence 8899999988889999999999999999999999999
Q ss_pred HHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccC
Q 011130 245 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 324 (493)
Q Consensus 245 v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg 324 (493)
+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|+++||.|+++++||||++++++|++.++++...++.|
T Consensus 237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 998764 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCC
Q 011130 325 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 404 (493)
Q Consensus 325 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 404 (493)
++.+.. .++|++.....+++...+..+...++..+.++.. .|+|++|||+..+.++|++++||+||||++|++|+|
T Consensus 314 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 389 (474)
T d1euha_ 314 NPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 389 (474)
T ss_dssp CGGGTC-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred Cccccc-ccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCC
Confidence 998754 5899999999999999999999999888765543 689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhhhhceEE
Q 011130 405 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 483 (493)
Q Consensus 405 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 483 (493)
+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+.+||||+|+||+|+++|++++++||+.|+|
T Consensus 390 ~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 469 (474)
T d1euha_ 390 VEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 469 (474)
T ss_dssp HHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEE
Confidence 99999999999999999999999999999999999999999997544 56799999999999999999999999999999
Q ss_pred EEeCC
Q 011130 484 VTALK 488 (493)
Q Consensus 484 ~~~~~ 488 (493)
++.++
T Consensus 470 ~~~~~ 474 (474)
T d1euha_ 470 VFDIK 474 (474)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98864
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-71 Score=578.23 Aligned_cols=370 Identities=28% Similarity=0.383 Sum_probs=333.5
Q ss_pred HHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhccHHHHHHHHHHHHHhhHHh
Q 011130 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (493)
Q Consensus 105 v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~ 184 (493)
|++||++||+||+ .|+.+|.++|.++|++++++|++|+++|++++++|+|||..++...|+..+++.+++++....++
T Consensus 2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~ 79 (446)
T d1ad3a_ 2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW 79 (446)
T ss_dssp HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999999 99999999999999999999999999999999999999999987679999999999988766554
Q ss_pred cCcc----CCCCCCceeEEEeeeeeeE----------------------------------------------------e
Q 011130 185 QGLT----APADGPYHVQTLHEPIGVA----------------------------------------------------G 208 (493)
Q Consensus 185 ~~~~----~~~~~~~~~~~~~~PlGVv----------------------------------------------------g 208 (493)
.... .........++.++|+||| +
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~~~~~ 159 (446)
T d1ad3a_ 80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQN 159 (446)
T ss_dssp HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHSCTT
T ss_pred hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccccccc
Confidence 3321 1223445678899999999 6
Q ss_pred EEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEccCCCHHHHHHHHHHHHHh
Q 011130 209 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 288 (493)
Q Consensus 209 vv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~~daDl~~aa~~i~~~~~~ 288 (493)
+++++.+.+.+.+ .+. ++.+|.|.||||+.+|+.|++.+++ ++||+++|||||||+||++|||++.|++.|++++|.
T Consensus 160 ~~~~~~~~~~~~~-~~~-~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~ 236 (446)
T d1ad3a_ 160 LYLVVKGGVPETT-ELL-KERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236 (446)
T ss_dssp TEEECCCSHHHHH-HHT-TSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHT
T ss_pred ccccccccchhhh-hhc-ccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhc
Confidence 7888887655443 344 5689999999999999999999998 899999999999999999999999999999999999
Q ss_pred hcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 011130 289 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 368 (493)
Q Consensus 289 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 368 (493)
++||.|+++++||||++++|+|+++|.+.++.+ +|+|.++.+++||++++.+++++..++++ ++...|+. ...
T Consensus 237 ~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~-~~~ 309 (446)
T d1ad3a_ 237 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGT-WDQ 309 (446)
T ss_dssp TTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCC-EET
T ss_pred CCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhccccee-ecC
Confidence 999999999999999999999999999998887 89999999999999999999999888765 34444443 344
Q ss_pred CCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHHhcceeEEEECCc
Q 011130 369 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 448 (493)
Q Consensus 369 ~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~V~VN~~ 448 (493)
.++|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++
T Consensus 310 ~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 389 (446)
T d1ad3a_ 310 SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDV 389 (446)
T ss_dssp TTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSS
T ss_pred CCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CC--CCCCCCccCCCCCCCCCcchHHHHHhhhhceEEEEe
Q 011130 449 DV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 449 ~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+. ..+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 390 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 429 (446)
T d1ad3a_ 390 IVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 429 (446)
T ss_dssp SGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEEC
T ss_pred ccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEc
Confidence 53 458899999999999999999999999999999886
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=3.5e-66 Score=545.26 Aligned_cols=386 Identities=20% Similarity=0.291 Sum_probs=328.8
Q ss_pred CCCeeeeecCCCCCeEE-EEecCCHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 011130 79 SGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (493)
Q Consensus 79 ~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk 157 (493)
++++|+++||+|||.|+ .++.++.+|+++||++|++||+ .|++++.++|.++|++++++|++|.++|++++++|+||
T Consensus 1 t~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk 78 (504)
T d1ez0a_ 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 78 (504)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999999997 7999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhccHHHHHHHHHHHHHhhHHhcCccCC---------CCCCceeEEEeeeeeeE---------------------
Q 011130 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP---------ADGPYHVQTLHEPIGVA--------------------- 207 (493)
Q Consensus 158 ~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~---------~~~~~~~~~~~~PlGVv--------------------- 207 (493)
|+.++.. |+..+++.++||+++.++....... .......+..++|+|||
T Consensus 79 p~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ 157 (504)
T d1ez0a_ 79 PEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 157 (504)
T ss_dssp CHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHH
Confidence 9999985 9999999999999988765443211 11234567888999998
Q ss_pred --------------------------------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHH
Q 011130 208 --------------------------------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 249 (493)
Q Consensus 208 --------------------------------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a 249 (493)
|++|+|++.+.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 158 ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~a 237 (504)
T d1ez0a_ 158 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237 (504)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhh
Confidence 899999998889999999999999999999999999999999
Q ss_pred hhcCCCce--eEecCCCCceEEccCCCHHHHH--HHHHHHHHhhcCCcccCCCeeEecchhH-HHHHHHHHHHHhhcccC
Q 011130 250 AKSNLKPV--TLELGGKSPFIVCEDADVDKAA--ELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVG 324 (493)
Q Consensus 250 ~~~~~~pv--~lelgG~~p~iV~~daDl~~aa--~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~vg 324 (493)
++ +++|+ ++|||||||+||++|||++.|+ +.++.++|.|+||.|++++++||+++.+ +.|++.+++.++. +
T Consensus 238 a~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~ 313 (504)
T d1ez0a_ 238 HE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q 313 (504)
T ss_dssp HH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C
T ss_pred hc-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c
Confidence 88 77775 4599999999999999999874 4789999999999999999999887765 4677777766553 2
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeeceEEec---CCCCccccccccccceEEEEE
Q 011130 325 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILK 401 (493)
Q Consensus 325 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~---~~~~~~i~~~E~fgPvl~v~~ 401 (493)
++++.+||+++..+++++ ++.+...|+.++.||.. +.+..|.++.. +..++++++||+||||++|++
T Consensus 314 ---~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~ 383 (504)
T d1ez0a_ 314 ---SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVV 383 (504)
T ss_dssp ---CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEE
T ss_pred ---ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeee
Confidence 456789999999888776 55666788988888763 44455555543 335688999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEecC--CHHHHHHHHHhcc--eeEEEECCcCCC---CC----CCCccCCCCCCCCCcch
Q 011130 402 YKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDVF---DA----AIPFGGYKQSGQGREKG 470 (493)
Q Consensus 402 ~~~~~eai~~~n~~~~gl~a~v~t~--d~~~~~~~~~~l~--~g~V~VN~~~~~---~~----~~pfGG~~~SG~G~~~g 470 (493)
|+|+||||+++|+++|||+++|||+ |..++.+++++|+ +|+|+||++++. .. .-||||.+.||.| ..|
T Consensus 384 ~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G 462 (504)
T d1ez0a_ 384 CENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVG 462 (504)
T ss_dssp ESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSS
T ss_pred cCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cch
Confidence 9999999999999999999999996 4558899999986 899999997642 22 2477888888844 568
Q ss_pred HHHHHhhhhceE
Q 011130 471 SYSLSNYLQVKA 482 (493)
Q Consensus 471 ~~~l~~~~~~k~ 482 (493)
..++++|+++..
T Consensus 463 ~~~i~~f~r~v~ 474 (504)
T d1ez0a_ 463 AEAIHRWLRPVA 474 (504)
T ss_dssp GGGGGGGEEEEE
T ss_pred HHHHHHHhchhh
Confidence 999999987643
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.2e-52 Score=429.42 Aligned_cols=334 Identities=19% Similarity=0.197 Sum_probs=256.8
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhhhhcc------------HHHH
Q 011130 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE------------VPMT 170 (493)
Q Consensus 103 ~~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~~~e~Gk~~~~a~~~E------------v~~~ 170 (493)
+|+.+++++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||+..++.. | +..+
T Consensus 1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~ 77 (414)
T d1o20a_ 1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEM 77 (414)
T ss_dssp CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHH
Confidence 578999999999999 999999999999999999999999999999999999999888653 4 5566
Q ss_pred HHHHHHHHHhhHHhcCccCCCCCCceeEEEeeeeeeE-------------------------------------------
Q 011130 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA------------------------------------------- 207 (493)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~PlGVv------------------------------------------- 207 (493)
++.+++++...+...+...+..........++|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~ 157 (414)
T d1o20a_ 78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV 157 (414)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence 7778888776655555443322223334445555554
Q ss_pred --------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCC-ceEEccC
Q 011130 208 --------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS-PFIVCED 272 (493)
Q Consensus 208 --------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~-p~iV~~d 272 (493)
++++.+.+.+......+. ..+.+.||||+.+++.+.+.++. +.+++++|+||+| ++||++|
T Consensus 158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 158 SAIREALKETEIPESSVEFIENTDRSLVLEMI---RLREYLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHT---TCTTTCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTT
T ss_pred hHHHhhhhhccccccccccccccchhhhhhcc---cccccCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeecccc
Confidence 334444443333333333 44455556666666667777766 6778888888755 5889999
Q ss_pred CCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHH
Q 011130 273 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 352 (493)
Q Consensus 273 aDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a 352 (493)
||++.|++.++.+.|.+ ||.|+++++++||+++||+|+++|.+...+..++++.++ .. .
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~----------~~--------~-- 292 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE----------KT--------R-- 292 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECH----------HH--------H--
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccch----------hh--------h--
Confidence 99999999999998876 999999999999999999999999998887655443221 10 0
Q ss_pred HhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 011130 353 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 432 (493)
Q Consensus 353 ~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 432 (493)
.+.+.+.. .....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 293 -------------------~~~~~~~~---~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~ 350 (414)
T d1o20a_ 293 -------------------EIVPDVVP---ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 350 (414)
T ss_dssp -------------------HHSTTSEE---CCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred -------------------hhccccee---cccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHH
Confidence 11111111 12345789999999999999999999999999999999999999999999
Q ss_pred HHHHhcceeEEEECCcCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhhhceEEEEe
Q 011130 433 TLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 433 ~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~G--~~--~g~~~l~~~~~~k~v~~~ 486 (493)
++++++++|.|+||+++.+....|||+.+++|+| +. +|++++++||+.|+|++.
T Consensus 351 ~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 351 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG 408 (414)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred HHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEEC
Confidence 9999999999999998766556677776777753 33 389999999999999875
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.4e-42 Score=355.13 Aligned_cols=348 Identities=16% Similarity=0.141 Sum_probs=237.7
Q ss_pred HHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcCCChhhh----h--hccHHHHH
Q 011130 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE------TWDNGKPFEQS----A--QTEVPMTT 171 (493)
Q Consensus 104 ~v~~av~~A~~A~~~~~w~~~~~~~R~~iL~~la~~l~~~~~ela~~~------~~e~Gk~~~~a----~--~~Ev~~~~ 171 (493)
.++++++.|++|++ .|+.+|.++|.++|+++++.|++|.++|+++. +++.|++...- . ...+...+
T Consensus 4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence 46788999999999 99999999999999999999999999998864 44556553211 0 01244455
Q ss_pred HHHHHHHHhhHHhcCcc--CCCCCCceeEEEeeeeeeE------------------------------------------
Q 011130 172 RLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVA------------------------------------------ 207 (493)
Q Consensus 172 ~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~PlGVv------------------------------------------ 207 (493)
+.++..+.+.+...... ...+.+...+..++|+|||
T Consensus 82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI~e~~P~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~ 161 (436)
T d1vlua_ 82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAK 161 (436)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSCTHHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeeccccccchhhhhhhhcccccCCcceecCCcccccCHHHHHH
Confidence 55665555433221111 0122456678889999998
Q ss_pred -----------------eEEEeeeCCccchhhhhhccccccEEEEecCcHHHHHHHHHHhhcCCCceeEecCCCCceEEc
Q 011130 208 -----------------GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 270 (493)
Q Consensus 208 -----------------gvv~vv~~~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~a~~~~~~pv~lelgG~~p~iV~ 270 (493)
|+++++++ +.++++.|..|++||+|+||||...++.+.+. ..+|++.++||++|+||+
T Consensus 162 ~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~Vd 236 (436)
T d1vlua_ 162 IVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIYLD 236 (436)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEEEC
T ss_pred HHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCccceeec
Confidence 77899887 56788999999999999999999998888664 335999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhhcCCcccCCCeeEecchhHHHHHHHHHHHHhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 011130 271 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 350 (493)
Q Consensus 271 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~ 350 (493)
+|||+|.|++.++.++|.++|| |++.++++||+++++.|...+...... | ..+. .++.. .....
T Consensus 237 ~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---g------v~l~--~~~~~----~~~~~ 300 (436)
T d1vlua_ 237 EDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---G------VTIH--ATKDL----KTAYF 300 (436)
T ss_dssp TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---C------CCBE--ECHHH----HHHHH
T ss_pred ccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---C------cEEE--eCHHH----HHHhh
Confidence 9999999999999999999996 889999999999998886655444332 1 1111 12222 12222
Q ss_pred HHHhCCCEEEeCCcccCCCCceeeceEEecCCCCccccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 011130 351 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 430 (493)
Q Consensus 351 ~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 430 (493)
+..... |. ..+....|++..... ..+.+|.|+||++|++++|+||||+++|+++|||+++|||+|.+.
T Consensus 301 ~~~~~~------~~---~~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~ 368 (436)
T d1vlua_ 301 DKLNEL------GK---LTEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKAN 368 (436)
T ss_dssp HHHHHH------TC---CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHH
T ss_pred hhhhhc------cc---ccccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHH
Confidence 211111 11 112233344433222 236899999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceeEEEECCcCCCCCCCCccCCCCCCC----CCcchHHHHHhhhhceEEEEe
Q 011130 431 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ----GREKGSYSLSNYLQVKAVVTA 486 (493)
Q Consensus 431 ~~~~~~~l~~g~V~VN~~~~~~~~~pfGG~~~SG~----G~~~g~~~l~~~~~~k~v~~~ 486 (493)
+++|++++++|.||||+++.|..+.+||--.+-|+ .+..|+.|++..|..|+++..
T Consensus 369 a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g 428 (436)
T d1vlua_ 369 AEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRG 428 (436)
T ss_dssp HHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEEC
T ss_pred HHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEEC
Confidence 99999999999999999988877777763333343 356899999999999998875
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