Citrus Sinensis ID: 011178
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 491 | 2.2.26 [Sep-21-2011] | |||||||
| Q00624 | 555 | L-ascorbate oxidase homol | N/A | no | 0.918 | 0.812 | 0.546 | 1e-143 | |
| P29162 | 554 | L-ascorbate oxidase homol | N/A | no | 0.926 | 0.821 | 0.514 | 1e-139 | |
| Q9SU40 | 587 | Monocopper oxidase-like p | no | no | 0.918 | 0.768 | 0.504 | 1e-130 | |
| Q9FHN6 | 592 | Monocopper oxidase-like p | no | no | 0.953 | 0.790 | 0.486 | 1e-127 | |
| Q8VXX5 | 589 | Monocopper oxidase-like p | no | no | 0.916 | 0.764 | 0.495 | 1e-125 | |
| Q0IQU1 | 564 | Laccase-22 OS=Oryza sativ | no | no | 0.837 | 0.728 | 0.309 | 2e-38 | |
| Q8RYM9 | 562 | Laccase-2 OS=Oryza sativa | no | no | 0.916 | 0.800 | 0.286 | 4e-35 | |
| P24792 | 579 | L-ascorbate oxidase OS=Cu | N/A | no | 0.908 | 0.770 | 0.262 | 1e-34 | |
| Q1PDH6 | 566 | Laccase-16 OS=Arabidopsis | no | no | 0.839 | 0.727 | 0.290 | 6e-34 | |
| Q40588 | 578 | L-ascorbate oxidase OS=Ni | N/A | no | 0.908 | 0.771 | 0.261 | 8e-34 |
| >sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/461 (54%), Positives = 313/461 (67%), Gaps = 10/461 (2%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L+T NG+Q R+N WQDG GT CPI PG N+TY Q KDQIGSYFY+P+ H+AAGGYG
Sbjct: 81 LLTWNGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYG 140
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGR--- 149
G+++ SR LIPVP+ P D+T+L GDWY K+HT LK LD G + PDG+VING+
Sbjct: 141 GLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVINGKSGK 200
Query: 150 --GSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
GS+A FT+ GKTYR RI NVG+ TSINFRIQ HKM LVE+EG+H LQN YDSLD+H
Sbjct: 201 GDGSDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVH 260
Query: 208 LGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDW 267
+GQ + +V A+Q P+ YY+V S+RF V++ T +L Y G S P GP W
Sbjct: 261 VGQCFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGPVGWA-W 319
Query: 268 SLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP 327
SL Q RS R NLTAS RPNPQGSYHYG IN T TI+L NT ++GK R+A+N VS
Sbjct: 320 SLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTE 379
Query: 328 ADTPLKLADYFKIP-GVFSVGSIPDNPTG---GGAYLQTSVMAADFRGFAEVVFENPEDT 383
+TPLKLA+YF I VF +I D+PT ++ +V+ R F EVVFEN E +
Sbjct: 380 PETPLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKS 439
Query: 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+QSWH+DG++FF+V ++ G WTP R YNL D +SR TVQVYPK W A+ + DN GMW
Sbjct: 440 VQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMW 499
Query: 444 NIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 484
N+RSEN R+YLGQQ Y V S S RDEY +P +L CG
Sbjct: 500 NVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCG 540
|
Probable oxidase that may be involved in pollen tube growth. Brassica napus (taxid: 3708) EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: - |
| >sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/468 (51%), Positives = 309/468 (66%), Gaps = 13/468 (2%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L T NGVQ R+NSWQDG GT CPI PG+NFTY QVKDQIGSY YFP+ A H+AAGGYG
Sbjct: 79 LFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKDQIGSYSYFPTTALHRAAGGYG 138
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
+ + SR LIPVPFD PA ++ + GDWY K H LK ILD G + PDG++ING+ +
Sbjct: 139 ALNVHSRALIPVPFDNPADEYNVFVGDWYNKGHKTLKKILDGGRTIGRPDGIIINGKSAK 198
Query: 153 ANT-----FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
FT++ GKTYR+R N+G+ +S+N R QGH M LVE+EG+HT+QN YDSLD+H
Sbjct: 199 VGEAKEPLFTMEAGKTYRYRFCNLGMRSSVNIRFQGHPMKLVELEGSHTVQNIYDSLDLH 258
Query: 208 LGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVS----GPPPGGPTT 263
+GQ SVLV ADQ P+ YY+V+S+RF Q LS+ +++ Y+N G S PPP T
Sbjct: 259 VGQCLSVLVTADQEPKDYYLVVSSRFLKQALSSVAIIRYANGKGPASPELPTPPPEN-TE 317
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 323
I WS+ Q RS R NLTAS RPNPQGSYHYG IN T TI++ N+ + GK RY +N +
Sbjct: 318 GIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKIFNSMSQVGGKLRYGLNGI 377
Query: 324 SFIPADTPLKLADYFKIPG-VFSVGSIPDNPTGGGAYL--QTSVMAADFRGFAEVVFENP 380
S +TPLKL +YF F + D + L T+V A +R F E++FEN
Sbjct: 378 SHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKLTIATNVKNATYRNFVEIIFENH 437
Query: 381 EDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV 440
E T++++H+DG++FFAV ++ G W+P R YNL D +SR +QVYP SW A+ + DN
Sbjct: 438 EKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNA 497
Query: 441 GMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488
GMWN+RSE W + YLG+Q Y V S + S RDEY IP N LCG G
Sbjct: 498 GMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDNHPLCGIVKG 545
|
Probable oxidoreductase that may be involved in pollen tube growth. Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: - |
| >sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/472 (50%), Positives = 309/472 (65%), Gaps = 21/472 (4%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L+ NG+QQRR SWQDGV GTNCPIPP N+TY QVKDQIGS+FYFPSL F +A+GG+G
Sbjct: 78 LLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSLHFQRASGGFG 137
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS- 151
+ R +IPVPF P GD T+ GDWY +NHT L+ LD G DL PDG++ING+G
Sbjct: 138 SFVVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKDLGMPDGVLINGKGPY 197
Query: 152 -----------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNT 200
+ T TV GKTYR R+SNVGISTS+NFRIQGH ++L E EG++T+Q
Sbjct: 198 RYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQQN 257
Query: 201 YDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFTSQVL----SATSVLHYSNSAGSVSG 255
Y SLDIH+GQSYS LV DQ YYIV S R ++ + + +L Y+NS G G
Sbjct: 258 YTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKAKG 317
Query: 256 PPPGGPTTQID--WSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAP-TI 312
P GP + D +S+ QARS+R N++ASG RPNPQGS+ YG IN T L+N P TI
Sbjct: 318 QLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPVTI 377
Query: 313 NGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372
+GK+R +N +SF TP++LAD K+ V+ + P P G A + TS++ +RGF
Sbjct: 378 SGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKL-DFPKRPLTGPAKVATSIINGTYRGF 436
Query: 373 AEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTA 432
EVV +N + +QS+H+ G+ FF VGMD GEWT SR TYN D I+R T+QVYP +W+A
Sbjct: 437 MEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSA 496
Query: 433 VYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 484
+ + LDN G WN+R+EN YLGQ+ Y+RV + + + E+ P N L CG
Sbjct: 497 ILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCG 548
|
May be a monocopper oxidase of unknown specificity. Involved in directional growth processes, possibly by participating in cell wall expansion. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/489 (48%), Positives = 314/489 (64%), Gaps = 21/489 (4%)
Query: 16 THLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGS 75
T+ H+ VLN + L+T GVQ RRNSWQDGV GTNCPIPP NFTY Q+KDQIGS
Sbjct: 64 TNYNVHVNVLNHLDEPLLLTWPGVQMRRNSWQDGVLGTNCPIPPNWNFTYDFQLKDQIGS 123
Query: 76 YFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG 135
YFY PSL F +A+GG+G + I +R L+P+PF P G+ + GDWY +NHT L+ ILDSG
Sbjct: 124 YFYSPSLNFQRASGGFGALIINNRDLVPIPFTEPDGEIIFIIGDWYTQNHTALRRILDSG 183
Query: 136 SDLPFPDGLVINGRGS-----------NANTFTVDQGKTYRFRISNVGISTSINFRIQGH 184
+L PDG++ING+G T VD GKTYR R+ NVGISTS+NFRIQ H
Sbjct: 184 KELGMPDGVLINGKGPFKYNSSVPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNH 243
Query: 185 KMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFTS----QVLS 239
K+LL+E EG +T Q + D+H+GQSYS LV DQ YYIV S RF + Q ++
Sbjct: 244 KLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVT 303
Query: 240 ATSVLHYSNSAGSVSGPPPGGPT-TQIDWS-LEQARSLRRNLTASGPRPNPQGSYHYGLI 297
+LHYSNS G SGP P T WS + Q R++++N +ASG RPNPQGS+HYG I
Sbjct: 304 GVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQI 363
Query: 298 NTTHTIRLQNTAPT-INGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGG 356
N T T L++ PT INGK R +N +SF+ TP++LAD K+ G + + PD P
Sbjct: 364 NITRTYILRSLPPTKINGKLRATLNGISFVNPSTPMRLADDHKVKGDYML-DFPDRPLDE 422
Query: 357 GA-YLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLR 415
L +S++ A ++GF +V+F+N + +QS+HIDG+ F+ V MD G W+ +YN
Sbjct: 423 KLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNW 482
Query: 416 DTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYP 475
D ++R TV+VYP +WTAV + LDNVG+WNIR EN R YLGQ+ Y+R+ + + E
Sbjct: 483 DAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMD 542
Query: 476 IPSNALLCG 484
P N + CG
Sbjct: 543 PPENVMYCG 551
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/472 (49%), Positives = 310/472 (65%), Gaps = 22/472 (4%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L+T G+Q RRNSWQDGV GTNCPIPP NFTY QVKDQIGS+FY PSL F +A+GG+G
Sbjct: 82 LLTWPGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGSFFYSPSLNFQRASGGFG 141
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS- 151
I I +R +IP+PF P G+ + GDWY ++H L+ LDSG +L PDG++ING+G
Sbjct: 142 PIVINNRDIIPIPFPQPDGELIFIIGDWYTQDHKALRRALDSGKELGMPDGVLINGKGPY 201
Query: 152 ----------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
+ TF V+ GKTYR R+ NVGISTS+NFRIQ H +LLVE EG +T Q +
Sbjct: 202 KYNSSVPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANF 261
Query: 202 DSLDIHLGQSYSVLVRADQPP-QGYYIVISTRFTS----QVLSATSVLHYSNSAGSVSGP 256
D+H+GQSYS LV DQ YYIV S RF + Q ++ ++LHYSNS G VSGP
Sbjct: 262 TDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGP 321
Query: 257 PPGGPTTQID--WS-LEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPT-I 312
P P T + WS + Q +++R+N +ASG RPNPQGS+HYG IN T+T L++ PT I
Sbjct: 322 LP-VPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQINITNTYILRSLPPTII 380
Query: 313 NGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372
NG R +N +SF+ TP++LAD K+ G + + PD P L S++ A ++GF
Sbjct: 381 NGALRATLNGISFVNPSTPVRLADRNKVKGAYKL-DFPDRPFNRPLRLDRSMINATYKGF 439
Query: 373 AEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTA 432
+VVF+N + +QS+H+DG++FF VGMD G W+ + +YN D ISR T++VYP WTA
Sbjct: 440 IQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTA 499
Query: 433 VYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 484
V + LDNVG+WNIR EN R YLG++ Y+R+ + + E P N L CG
Sbjct: 500 VLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYCG 551
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 213/459 (46%), Gaps = 48/459 (10%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 82
V+N + I +GV+Q R W DG Y T CPI PG +F Y + Q G+ + +
Sbjct: 75 VVNHVAHNVTIHWHGVRQIRTGWYDGPAYITQCPIQPGSSFLYNFTITGQRGTLLWHAHI 134
Query: 83 AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKN-HTDLKAILDSGSDLPFP 141
+ +A +G I I + +P PF P + I+ G+W+K++ T + + G
Sbjct: 135 NWLRATV-HGAIVILPKLGVPYPFPAPHKEAVIVLGEWWKEDTETVINQAMQLGVGPNIS 193
Query: 142 DGLVINGR-------GSNANTF--TVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVE 192
D ING S+ + F +V+ GKTY RI N ++ + F++ GH++ +VEV+
Sbjct: 194 DSHTINGHPGPLSECASSQDGFKLSVENGKTYMLRIINAALNDDLFFKVAGHELTVVEVD 253
Query: 193 GTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQV----LSATSVLHYSN 248
+T D+L I GQ+ +VLVRA+Q Y + +S + V + T+ LHY+N
Sbjct: 254 AVYTKPFKTDTLLITPGQTTNVLVRANQGAGRYLLSVSPFMDAPVQVDNKTGTATLHYAN 313
Query: 249 SAGS------VSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHT 302
+ S + PPP T + + SL + P PQ H L+ T
Sbjct: 314 TVSSSMASLTLVKPPPQNATHIVSKFTDSLHSLN---SKEYPANVPQTVDHSLLL--TVG 368
Query: 303 IRLQNTAPTINGKQRYA-VNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNP------TG 355
+ + ING + +N+V+FI TP+ A Y+ IPGVF+ P P TG
Sbjct: 369 VGVNPCPSCINGTRVVGTINNVTFIMPSTPILQAHYYNIPGVFT-EDFPATPLHKFNYTG 427
Query: 356 GGAY-LQ----TSVMAADFRGFAEVVFEN-----PEDTLQSWHIDGHNFFAVGMDGGEWT 405
G LQ T V + +VV ++ PE H+ G NFF VG G +
Sbjct: 428 SGPKNLQTMNGTRVYRLPYNASVQVVLQDTGIISPES--HPIHLHGFNFFVVGKGVGNYN 485
Query: 406 P-ASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
P S T+NL D I R T+ V WTA+ DN G+W
Sbjct: 486 PRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVW 524
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 219/500 (43%), Gaps = 50/500 (10%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 82
V N + I +G++QRRN W DG Y T CPI G ++ Y V Q G+ ++ +
Sbjct: 73 VTNHVKHNMTIHWHGLKQRRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHI 132
Query: 83 AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFP- 141
A+ +A +G I I +P PF P + I+ G+W+ H D++ + GS L
Sbjct: 133 AWMRATV-HGAIVILPAAGVPYPFPKPDDEAEIVLGEWW---HADVETVERQGSMLGMAP 188
Query: 142 ---DGLVINGR-------GSNANTFT--VDQGKTYRFRISNVGISTSINFRIQGHKMLLV 189
D ING+ S +T+ V GKTY RI N ++ + F I GH M +V
Sbjct: 189 NMSDAHTINGKPGPLVPFCSEKHTYALQVQSGKTYLLRIINAAVNDELFFSIAGHNMTVV 248
Query: 190 EVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVL-----SATSVL 244
E++ T+T ++ + GQ+ +VLV ADQ P G Y +++ F + +AT++L
Sbjct: 249 EIDATYTKPFAASTVQLSPGQTMNVLVSADQSP-GRYFMVAKPFNDVPIPADNKTATAIL 307
Query: 245 HYSNSAGS-VSGPPPGGPTTQIDWSLEQARSLRRNLTASG-PRPNPQGSYHYGLINTTHT 302
Y+ S V P P T S+ R+L + P P + L +T
Sbjct: 308 QYAGVPTSVVPALPQTMPATNSTGSVAAFHDKLRSLNSPRYPADVPLAVDRHLL----YT 363
Query: 303 IRLQ-NTAPTINGKQRYA--VNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNP------ 353
I L + T + R A +N+++F+ T L A Y+ GVF+ PD P
Sbjct: 364 IGLNIDPCETCLNRSRLAASLNNITFVMPRTALLQAHYYGQKGVFA-ADFPDRPPARFNY 422
Query: 354 ------TGGGAYLQTSVMAADFRGFAEVVFENPE-DTLQS--WHIDGHNFFAVGMDGGEW 404
G G L T + + E+V ++ +++S +H+ G+NFF VG G +
Sbjct: 423 TGVPLTAGLGTSLGTRLSKIAYNATVELVLQDTNLLSVESHPFHLHGYNFFVVGRGVGNF 482
Query: 405 TPASR-LTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRV 463
PA YNL D R TV V WTA+ DN G+W + G + V
Sbjct: 483 DPAKDPAKYNLVDPPERNTVGVPAGGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFLV 542
Query: 464 YSSANSWRDEYPIPSNALLC 483
+ P P + C
Sbjct: 543 EDGSGPDESVLPPPKDLPKC 562
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 | Back alignment and function description |
|---|
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 216/519 (41%), Gaps = 73/519 (14%)
Query: 13 SLITHLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKD 71
LI L+T VV+++ +G+ QR W DG + C I PG+ F Y V D
Sbjct: 77 ELINKLHTEGVVIHW---------HGILQRGTPWADGTASISQCAINPGETFFYNFTV-D 126
Query: 72 QIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAI 131
G++FY L ++AG YG + + PF G+ +L DW+ ++ +
Sbjct: 127 NPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHY-DGEINLLLSDWWHQSIHKQEVG 185
Query: 132 LDSGSD--LPFPDGLVINGRG-----------SNAN-------------TFTVDQGKTYR 165
L S + P +++NGRG SN F V KTYR
Sbjct: 186 LSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSEPCAPYIFHVMPKKTYR 245
Query: 166 FRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQG 224
RI++ ++NF I H +L+VE +G + +DI+ G+SYSVL+ DQ P +
Sbjct: 246 IRIASTTALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSEN 305
Query: 225 YYIVISTRFTS-QVLSATSVLHY-SNSAGSV-SGPPPGGPTTQIDWSLEQARSLRRNLTA 281
Y++ + TR ++L+Y NS + + PPP P +++++ +TA
Sbjct: 306 YWVSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPPPETPAWD---DFDRSKNFTYRITA 362
Query: 282 SGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIP 341
+ P P + + I L NT ING ++A+N VS TP A F +
Sbjct: 363 AMGSPKPP-------VKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLL 415
Query: 342 GVFSVGSIPD----------NPTGGGAYLQTSVMAADFRGFAEVVFENPE------DTLQ 385
F P+ PT + V +V+ +N +
Sbjct: 416 HAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIH 475
Query: 386 SWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNI 445
WH+ GH+F+ +G G++T + NL++ R TV ++P WTA+ DN G+W
Sbjct: 476 PWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAF 535
Query: 446 RSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 484
++G A IP+ AL CG
Sbjct: 536 HCHIEPHLHMGMGVVF-----AEGVEKVGRIPTKALACG 569
|
May be involved in a redox system involving ascorbic acid. Cucurbita maxima (taxid: 3661) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 208/462 (45%), Gaps = 50/462 (10%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 82
V+N + I +G++Q R W DG Y T CPI PG+N+ + + Q G+ ++ +
Sbjct: 73 VVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHNFTLTGQRGTLWWHAHI 132
Query: 83 AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDL---- 138
+ +A +G I I + +P PF P + TI+ +W+K +D++ +++ S +
Sbjct: 133 LWLRATV-HGAIVILPKLGVPYPFPKPYKEKTIVLSEWWK---SDVEELINEASRIGTAP 188
Query: 139 PFPDGLVINGR-GSNANT-------FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVE 190
D ING GS +N V GKTY RI N ++ + F+I GH + +VE
Sbjct: 189 SASDAHTINGHSGSISNCPSQSSYGLPVRAGKTYMLRIINAALNEELFFKIAGHVLTVVE 248
Query: 191 VEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVL-----SATSVLH 245
V+ +T D++ I GQ+ +VL+ A+ Y+V +T FT + +AT+ LH
Sbjct: 249 VDAVYTKPYKTDTVFIAPGQTTNVLLTANANAGSNYMVAATTFTDAHIPYDNVTATATLH 308
Query: 246 YSNSAGSVSGPP----PGGPTTQIDW-SLEQARSLRRNLTASGPRPNPQGSYHYGLINTT 300
Y +VS P W + + RSLR + P P H
Sbjct: 309 YIGHTSTVSTSKKTVLASLPPQNATWVATKFTRSLRSLNSLEYPARVPTTVEHSLFF--- 365
Query: 301 HTIRL-QNTAPTINGKQRYA--VNSVSFIPADTPLKLADYFKIPGVFS--VGSIPDNPTG 355
T+ L N + N R +N+V+F T L A +F I GVF+ + P NP
Sbjct: 366 -TVGLGANPCQSCNNGVRLVAGINNVTFTMPKTALLQAHFFNISGVFTDDFPAKPSNPYD 424
Query: 356 GGAYLQTSVMAADFRG----------FAEVVFENPEDTLQS---WHIDGHNFFAVGMDGG 402
A ++ V AA +G ++V +N L +H+ G NFF VG G
Sbjct: 425 YTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTAMILSDNHPFHLHGFNFFEVGRGLG 484
Query: 403 EWTPASR-LTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+ P +NL D + R TV V WTA+ DN G+W
Sbjct: 485 NFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIADNPGVW 526
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 | Back alignment and function description |
|---|
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 222/527 (42%), Gaps = 81/527 (15%)
Query: 9 SLGCSLITHLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVL 67
++ L L+T VV+++ +G++Q W DG + C I PG+ F Y
Sbjct: 70 TVAVHLTNKLHTEGVVIHW---------HGIRQIGTPWADGTAAISQCAINPGETFLYRF 120
Query: 68 QVKDQIGSYFYFPSLAFHKAAGGYGG--IKIASRPLIPVPFDPPAGDFTILAGDWYKKNH 125
+V D+ G+YFY ++AG YG +++ P +D G+F +L DW+ K
Sbjct: 121 KV-DKAGTYFYHGHYGMQRSAGLYGSLIVEVGEGEKEPFHYD---GEFNLLLSDWWHKGS 176
Query: 126 TDLKAILDSGSD--LPFPDGLVINGRG----SNANTFT---------------------V 158
+ + L S + P L++NGRG S A F+ V
Sbjct: 177 HEQEVDLSSNPLRWIGEPQTLLLNGRGQYNCSLAARFSKPPLPQCKLRGGEQYAPQILRV 236
Query: 159 DQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRA 218
K YR R+++ S++ I GHKM++VE +G + + +DI+ G+SYSVL +
Sbjct: 237 RPNKIYRLRVASTTALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKT 296
Query: 219 DQ-PPQGYYIVISTRFTS-QVLSATSVLHY-SNSAGSV-SGPPPGGPTTQIDWSLEQARS 274
DQ P + Y+I I+ R + ++L+Y NSA + PPP P D++ ++ S
Sbjct: 297 DQDPTKNYWISINVRGREPKTPQGLTLLNYLPNSASKFPTLPPPIAPLWN-DYNHSKSFS 355
Query: 275 LRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKL 334
+ P+P PQ I L NT I+G ++A+N+VS + T L L
Sbjct: 356 NKIFALMGSPKPPPQNH---------RRIILLNTQNKIDGYTKWAINNVSLV-LPTQLYL 405
Query: 335 ADYFKIPGVFSVGSIPDN-----------PTGGGAYLQTSVMAADFRGFAEVVFENPE-- 381
F PDN P Y V F +++ +N
Sbjct: 406 GSIRYGINAFDTKPPPDNFPKDYDVLKQAPNSNSTY-GNGVYMLKFNTTIDIILQNANAL 464
Query: 382 ----DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL 437
+ WH+ GH+F+ +G G+++ +NL++ R T ++P WTA+
Sbjct: 465 AKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVT 524
Query: 438 DNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 484
DN G+W ++G A IP AL CG
Sbjct: 525 DNPGVWAFHCHIEPHLHMGMGVIF-----AEGVHLVKKIPKEALACG 566
|
May be involved in a redox system involving ascorbic acid. Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 491 | ||||||
| 255567689 | 538 | multicopper oxidase, putative [Ricinus c | 0.947 | 0.864 | 0.877 | 0.0 | |
| 224064972 | 545 | predicted protein [Populus trichocarpa] | 0.957 | 0.862 | 0.857 | 0.0 | |
| 225447041 | 541 | PREDICTED: L-ascorbate oxidase homolog [ | 0.934 | 0.848 | 0.899 | 0.0 | |
| 357471325 | 538 | L-ascorbate oxidase-like protein [Medica | 0.949 | 0.866 | 0.858 | 0.0 | |
| 449519497 | 543 | PREDICTED: L-ascorbate oxidase homolog [ | 0.934 | 0.845 | 0.862 | 0.0 | |
| 224128966 | 532 | predicted protein [Populus trichocarpa] | 0.951 | 0.877 | 0.850 | 0.0 | |
| 449453507 | 543 | PREDICTED: L-ascorbate oxidase homolog [ | 0.934 | 0.845 | 0.860 | 0.0 | |
| 356543694 | 536 | PREDICTED: L-ascorbate oxidase homolog [ | 0.953 | 0.873 | 0.869 | 0.0 | |
| 357453363 | 539 | L-ascorbate oxidase-like protein [Medica | 0.949 | 0.864 | 0.866 | 0.0 | |
| 357453365 | 458 | L-ascorbate oxidase-like protein [Medica | 0.930 | 0.997 | 0.875 | 0.0 |
| >gi|255567689|ref|XP_002524823.1| multicopper oxidase, putative [Ricinus communis] gi|223535883|gb|EEF37543.1| multicopper oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/465 (87%), Positives = 434/465 (93%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83
V N + LI+ NGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL
Sbjct: 73 VFNSLDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLG 132
Query: 84 FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 143
HKAAGGYGG KIASR +IPVPF PPAGDFT+LAGDW++ NHTDLKAILD GSDLPFPDG
Sbjct: 133 MHKAAGGYGGFKIASRSVIPVPFPPPAGDFTVLAGDWFRMNHTDLKAILDGGSDLPFPDG 192
Query: 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 203
L+INGRGSN TF+VDQGKTYRFRISNVG++TSINFRIQGHKMLLVEVEGTHTLQNTYDS
Sbjct: 193 LLINGRGSNGYTFSVDQGKTYRFRISNVGLTTSINFRIQGHKMLLVEVEGTHTLQNTYDS 252
Query: 204 LDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTT 263
LDIHLGQSYSVLV ADQP Q YYIV+STRFTSQV + TS+LHYSNSAGSVSGPPPGGPT
Sbjct: 253 LDIHLGQSYSVLVTADQPAQDYYIVVSTRFTSQVFTTTSILHYSNSAGSVSGPPPGGPTI 312
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 323
QIDWSLEQARS+RRNL+ASGPRPNPQGSYHYGL+NTT TIRLQN+A INGKQRYAVNSV
Sbjct: 313 QIDWSLEQARSIRRNLSASGPRPNPQGSYHYGLVNTTRTIRLQNSASMINGKQRYAVNSV 372
Query: 324 SFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 383
SF PADTPLKLAD+F IPGVFS+GSIPDNPTGGGAYLQTSVMAADFRG+AEVVF+NPEDT
Sbjct: 373 SFTPADTPLKLADHFNIPGVFSLGSIPDNPTGGGAYLQTSVMAADFRGYAEVVFDNPEDT 432
Query: 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
LQSWHIDGHNFF VGMDGG+W+PASRL+YNLRDTISRCTVQVYPKSWTAVY+PLDNVGMW
Sbjct: 433 LQSWHIDGHNFFVVGMDGGQWSPASRLSYNLRDTISRCTVQVYPKSWTAVYMPLDNVGMW 492
Query: 444 NIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488
N+RSENWA QYLGQQFYLRVYS ANSWRDEYPIPSNALLCGRA G
Sbjct: 493 NVRSENWAHQYLGQQFYLRVYSPANSWRDEYPIPSNALLCGRAAG 537
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064972|ref|XP_002301616.1| predicted protein [Populus trichocarpa] gi|222843342|gb|EEE80889.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/470 (85%), Positives = 434/470 (92%)
Query: 22 LVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS 81
+ V N + L++ NGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS
Sbjct: 73 ISVFNSLDEPFLLSWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS 132
Query: 82 LAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFP 141
L HKAAGG+GG KIASR +IPVPF PPAGDFTILAGDW+KKNHTDLKAILD GSDLPFP
Sbjct: 133 LGMHKAAGGFGGFKIASRSVIPVPFPPPAGDFTILAGDWFKKNHTDLKAILDGGSDLPFP 192
Query: 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
DGL+INGRGSN TFTVDQGKTYR RISNVG++TSINFRIQGHKMLLVEVEGTH+LQNTY
Sbjct: 193 DGLLINGRGSNGYTFTVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVEVEGTHSLQNTY 252
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGP 261
DSLDIHLGQSYSVLV ADQ Q Y+IV+STRFTSQVL+ TS+LHYSNSAGSVS PP GP
Sbjct: 253 DSLDIHLGQSYSVLVTADQAAQDYFIVVSTRFTSQVLTTTSILHYSNSAGSVSDSPPSGP 312
Query: 262 TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVN 321
T Q+DWS+EQARSLRRNLTASGPRPNPQGSYHYGLINTTHT+RLQN+AP INGKQRYAVN
Sbjct: 313 TIQLDWSVEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTVRLQNSAPIINGKQRYAVN 372
Query: 322 SVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381
SVSFIPADTPLKLAD+F IPGVFS+GSI +NPTGGGAY QTSVMAADFRG+AE+VFENPE
Sbjct: 373 SVSFIPADTPLKLADHFNIPGVFSLGSISNNPTGGGAYRQTSVMAADFRGYAEIVFENPE 432
Query: 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441
D +QSWHIDGHNFF VGMDGG+W+PASRLTYNLRDTISRCTVQVYP+SWTAVY+PLDNVG
Sbjct: 433 DNVQSWHIDGHNFFVVGMDGGQWSPASRLTYNLRDTISRCTVQVYPESWTAVYMPLDNVG 492
Query: 442 MWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
MWN+RSENWARQYLGQQFYLRVYS ANSWRDEYPIP+NALLCGRA G T
Sbjct: 493 MWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALLCGRAAGRLT 542
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225447041|ref|XP_002269614.1| PREDICTED: L-ascorbate oxidase homolog [Vitis vinifera] gi|297739160|emb|CBI28811.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/459 (89%), Positives = 434/459 (94%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L++ NGVQQRRNSWQDGVYGTNCPIPPG+NFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG
Sbjct: 80 LLSWNGVQQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 139
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
GIKI+SRPLIPVPF PPAGD+TILAGDWYKKNHTDLKAILD GSDLPFPDGL+INGRGSN
Sbjct: 140 GIKISSRPLIPVPFPPPAGDYTILAGDWYKKNHTDLKAILDGGSDLPFPDGLLINGRGSN 199
Query: 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212
TFTVDQGKTYRFRISNVGI+TS+NFRIQGHKMLLVEVEGTH LQNTY SLDIHLGQSY
Sbjct: 200 GYTFTVDQGKTYRFRISNVGIATSLNFRIQGHKMLLVEVEGTHALQNTYSSLDIHLGQSY 259
Query: 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQA 272
SVLV ADQP Q YYIV+STRFTSQVL+ TS LHYSNSAG VSGPPPGGPT Q DWSL QA
Sbjct: 260 SVLVTADQPAQDYYIVVSTRFTSQVLTTTSTLHYSNSAGRVSGPPPGGPTIQTDWSLNQA 319
Query: 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPL 332
RS+RRNLTASGPRPNPQGSYHYGLINTTHTIRL N+AP INGKQRYAVNSVSFIPADTPL
Sbjct: 320 RSIRRNLTASGPRPNPQGSYHYGLINTTHTIRLANSAPVINGKQRYAVNSVSFIPADTPL 379
Query: 333 KLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH 392
KLADYFKI GVF++GSIPDNPTGGG YLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH
Sbjct: 380 KLADYFKISGVFNLGSIPDNPTGGGGYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH 439
Query: 393 NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452
NFF VGMDGG+WTP+SRL+YNLRDTISRCTVQVYPKSWTA+Y+PLDNVGMWN+RSENWAR
Sbjct: 440 NFFVVGMDGGQWTPSSRLSYNLRDTISRCTVQVYPKSWTALYMPLDNVGMWNVRSENWAR 499
Query: 453 QYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
QYLGQQFYLRVYS ANSWRDEYPIP NALLCGRA G +T
Sbjct: 500 QYLGQQFYLRVYSPANSWRDEYPIPKNALLCGRASGRKT 538
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357471325|ref|XP_003605947.1| L-ascorbate oxidase-like protein [Medicago truncatula] gi|355507002|gb|AES88144.1| L-ascorbate oxidase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/466 (85%), Positives = 432/466 (92%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83
V N + LI+ NGV QRRNSWQDGVYGTNCPI PG+NFTY+LQVKDQIGSYFYFPSLA
Sbjct: 71 VFNSLDEPFLISWNGVLQRRNSWQDGVYGTNCPISPGQNFTYILQVKDQIGSYFYFPSLA 130
Query: 84 FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 143
FHKAAGGYGG IASR +IPVPFDPP+GD+TILAGDWYK+NHTDL+AILDSGSDLPFPDG
Sbjct: 131 FHKAAGGYGGFTIASRSVIPVPFDPPSGDYTILAGDWYKRNHTDLRAILDSGSDLPFPDG 190
Query: 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 203
LVINGRGSNA TF VDQGKTYRFRISNVGI+TSINFRIQGHK+ LVEVEG+HTLQNTYDS
Sbjct: 191 LVINGRGSNAYTFAVDQGKTYRFRISNVGITTSINFRIQGHKIKLVEVEGSHTLQNTYDS 250
Query: 204 LDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTT 263
LDIHLGQ+YSVLV ADQPP YYIV++TRFTSQVL+A+S+LHYSNSAGSVSGP PGGPTT
Sbjct: 251 LDIHLGQTYSVLVTADQPPHDYYIVVTTRFTSQVLNASSILHYSNSAGSVSGPLPGGPTT 310
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 323
+IDWS+EQARSLRRNLTASGPRPNPQGSYHYG+INTT TIRLQN+AP INGKQRYAVN V
Sbjct: 311 EIDWSVEQARSLRRNLTASGPRPNPQGSYHYGMINTTRTIRLQNSAPIINGKQRYAVNGV 370
Query: 324 SFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 383
SFIPADTPLKLAD+F I GVFS+GSIPDNPTGGG YLQTSVMAADFRGF EVVFENPEDT
Sbjct: 371 SFIPADTPLKLADHFNIQGVFSLGSIPDNPTGGGGYLQTSVMAADFRGFVEVVFENPEDT 430
Query: 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
LQSWHIDGH+FF VGMDGG+W+ ASRL YNLRDTI+R TVQVYPKSWTA+Y+PLDNVGMW
Sbjct: 431 LQSWHIDGHSFFVVGMDGGQWSAASRLNYNLRDTIARSTVQVYPKSWTALYMPLDNVGMW 490
Query: 444 NIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGH 489
N+RSENWARQYLG QFYLRVYSS NS RDEYPIPSNAL CG+AVGH
Sbjct: 491 NVRSENWARQYLGHQFYLRVYSSTNSLRDEYPIPSNALQCGKAVGH 536
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449519497|ref|XP_004166771.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/459 (86%), Positives = 425/459 (92%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
LI+ NG+QQRRNSWQDGVYGTNCPIPPG+NFTYVLQVKDQIGSYFYFPSLA HKAAGG+G
Sbjct: 82 LISWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYFPSLALHKAAGGFG 141
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
G KI SR +IP+PF PAG+FT+LAGDWY KNHTDL+AILD GSDLP PDGL+INGRG N
Sbjct: 142 GFKIQSRSIIPIPFPTPAGEFTVLAGDWYSKNHTDLRAILDGGSDLPSPDGLLINGRGLN 201
Query: 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212
NTFTV+QGKTYRFRISNVG++T+INFRIQGHKMLLVEVEGTHTLQNTY+S+DIHLGQSY
Sbjct: 202 GNTFTVEQGKTYRFRISNVGLTTAINFRIQGHKMLLVEVEGTHTLQNTYESIDIHLGQSY 261
Query: 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQA 272
SVLV ADQPPQ YYIV+STRFTSQ+L+ TS+LHYSNSA SVSGPPPGGPT QIDWSLEQA
Sbjct: 262 SVLVTADQPPQDYYIVVSTRFTSQILTTTSLLHYSNSAASVSGPPPGGPTFQIDWSLEQA 321
Query: 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPL 332
RSLRRNLTA+GPRPNPQGSYHYGLIN T TIRL +TAP INGKQRYAVNSVSFIPADTPL
Sbjct: 322 RSLRRNLTANGPRPNPQGSYHYGLINVTRTIRLHSTAPIINGKQRYAVNSVSFIPADTPL 381
Query: 333 KLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH 392
KLADYFKI GVFS+GSIPD PTGG AYLQTSVM ADFRG+AEVVFENPED +QSWH+DGH
Sbjct: 382 KLADYFKISGVFSLGSIPDYPTGGDAYLQTSVMNADFRGYAEVVFENPEDVVQSWHVDGH 441
Query: 393 NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452
NFF VGMDGG+W PASRLTYNLRDTISRCTVQVYPKSWTAVY+PLDNVGMWNIRSENWAR
Sbjct: 442 NFFVVGMDGGQWIPASRLTYNLRDTISRCTVQVYPKSWTAVYMPLDNVGMWNIRSENWAR 501
Query: 453 QYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
QYLGQQ YLRVYS NSWRDEYPIPSNAL CGRA+G T
Sbjct: 502 QYLGQQLYLRVYSPVNSWRDEYPIPSNALKCGRAIGLNT 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128966|ref|XP_002320467.1| predicted protein [Populus trichocarpa] gi|222861240|gb|EEE98782.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/467 (85%), Positives = 430/467 (92%)
Query: 22 LVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS 81
+ V N + LI+ NGVQQRRNSWQDGVYGTNC IPPG+NFTYVLQVKDQIGSYFYFPS
Sbjct: 65 ISVFNSLDEPFLISWNGVQQRRNSWQDGVYGTNCAIPPGQNFTYVLQVKDQIGSYFYFPS 124
Query: 82 LAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFP 141
L HKAAGG+GG KIASR +IPVPF PP+GDFT LAGDW+KKNH+DLKAILD GSDLPFP
Sbjct: 125 LGMHKAAGGFGGFKIASRSVIPVPFSPPSGDFTFLAGDWFKKNHSDLKAILDGGSDLPFP 184
Query: 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
DGL+INGRGSN TFTVD GKTYRFRISNVG++TSINFRIQGHKMLLVEVEGTH+LQNTY
Sbjct: 185 DGLLINGRGSNGYTFTVDPGKTYRFRISNVGLTTSINFRIQGHKMLLVEVEGTHSLQNTY 244
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGP 261
DSLDIHLGQSYSVLV ADQ Y+IV+STRFTSQVL+ TS+LHYSNSAGSVS P GGP
Sbjct: 245 DSLDIHLGQSYSVLVTADQAAHDYFIVVSTRFTSQVLTTTSILHYSNSAGSVSDTPLGGP 304
Query: 262 TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVN 321
T QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTT T+RLQN+AP INGKQRYAVN
Sbjct: 305 TIQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTRTVRLQNSAPIINGKQRYAVN 364
Query: 322 SVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381
SVSFI ADTPLKLAD++ IPGVFS+GSIPD+PTGGGAYLQTSVMAADFRG+AE+VFENPE
Sbjct: 365 SVSFISADTPLKLADHYNIPGVFSLGSIPDSPTGGGAYLQTSVMAADFRGYAEIVFENPE 424
Query: 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441
D +QSWHIDGHNFF VGMDGG+W+PASRL+YNLRDTISRCTVQVYP+SWTAVY+PLDNVG
Sbjct: 425 DNVQSWHIDGHNFFVVGMDGGQWSPASRLSYNLRDTISRCTVQVYPESWTAVYMPLDNVG 484
Query: 442 MWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488
MWN+RSENWARQYLGQQFYLRVYS ANSWRDEYPIP+NALLCGRA G
Sbjct: 485 MWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALLCGRAAG 531
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449453507|ref|XP_004144498.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/459 (86%), Positives = 424/459 (92%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
LI+ NG+QQRRNSWQDGVYGTNCPIPPG+NFTYVLQVKDQIGSYFYFPSLA HKAAGG+G
Sbjct: 82 LISWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYFPSLALHKAAGGFG 141
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
G KI SR +IP+PF PAG+FT+LAGDWY KNHTDL+AILD GSDLP PDGL+INGRG N
Sbjct: 142 GFKIQSRSIIPIPFPTPAGEFTVLAGDWYSKNHTDLRAILDGGSDLPSPDGLLINGRGLN 201
Query: 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212
NTFTV+QGKTYRFRISNVG++T+INFRIQGHKMLLVEVEGTHTLQNTY+S+DIHLGQSY
Sbjct: 202 GNTFTVEQGKTYRFRISNVGLTTAINFRIQGHKMLLVEVEGTHTLQNTYESIDIHLGQSY 261
Query: 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQA 272
SVLV ADQPPQ YYIV+STRFTSQ+L+ TS+LHYSNSA SVSGPPPGGPT QIDWSLEQA
Sbjct: 262 SVLVTADQPPQDYYIVVSTRFTSQILTTTSLLHYSNSAASVSGPPPGGPTFQIDWSLEQA 321
Query: 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPL 332
RSLRRNLTA+GPRPNPQGSYHY LIN T TIRL +TAP INGKQRYAVNSVSFIPADTPL
Sbjct: 322 RSLRRNLTANGPRPNPQGSYHYRLINVTRTIRLHSTAPIINGKQRYAVNSVSFIPADTPL 381
Query: 333 KLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH 392
KLADYFKI GVFS+GSIPD PTGG AYLQTSVM ADFRG+AEVVFENPED +QSWH+DGH
Sbjct: 382 KLADYFKISGVFSLGSIPDYPTGGDAYLQTSVMNADFRGYAEVVFENPEDVVQSWHVDGH 441
Query: 393 NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452
NFF VGMDGG+W PASRLTYNLRDTISRCTVQVYPKSWTAVY+PLDNVGMWNIRSENWAR
Sbjct: 442 NFFVVGMDGGQWIPASRLTYNLRDTISRCTVQVYPKSWTAVYMPLDNVGMWNIRSENWAR 501
Query: 453 QYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
QYLGQQ YLRVYS NSWRDEYPIPSNAL CGRA+G T
Sbjct: 502 QYLGQQLYLRVYSPVNSWRDEYPIPSNALKCGRAIGLNT 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543694|ref|XP_003540295.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/468 (86%), Positives = 436/468 (93%)
Query: 22 LVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS 81
L V N + LI+ NGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS
Sbjct: 69 LHVFNSLDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPS 128
Query: 82 LAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFP 141
LAFHKAAGGYGG KIASR +IPVPF PPAGDFTILAGDWYK+NHTDL+AILD GSDLPFP
Sbjct: 129 LAFHKAAGGYGGFKIASRSVIPVPFPPPAGDFTILAGDWYKRNHTDLRAILDGGSDLPFP 188
Query: 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
DGL+INGRGSNA FTVDQGKTYRFRISNVG++TSINFRIQGHKMLLVEVEG HTLQNTY
Sbjct: 189 DGLIINGRGSNAYAFTVDQGKTYRFRISNVGLTTSINFRIQGHKMLLVEVEGIHTLQNTY 248
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGP 261
DSLDIHLGQSYSVLV ADQPPQ YYIV+STRFTSQVL+ATS+LHYSNS SVS PPPGGP
Sbjct: 249 DSLDIHLGQSYSVLVTADQPPQDYYIVVSTRFTSQVLTATSILHYSNSPTSVSSPPPGGP 308
Query: 262 TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVN 321
TTQIDWSL+QARSLRRNLTASGPRPNPQGSYHYGLINTT T+RLQN+A INGKQRYAVN
Sbjct: 309 TTQIDWSLDQARSLRRNLTASGPRPNPQGSYHYGLINTTRTVRLQNSAGIINGKQRYAVN 368
Query: 322 SVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381
SVSFIPADTPLKLADYFKIPGVF++GSIP+NPTG YLQTSVMAADFRG+AE+VFENPE
Sbjct: 369 SVSFIPADTPLKLADYFKIPGVFNLGSIPENPTGSDCYLQTSVMAADFRGYAEIVFENPE 428
Query: 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441
DT+QSWH+DGH+F+ VGMDGG+W+ +SR YNLRDTISRCTVQVYPKSWTAVY+PLDNVG
Sbjct: 429 DTVQSWHVDGHHFYVVGMDGGQWSTSSRSNYNLRDTISRCTVQVYPKSWTAVYMPLDNVG 488
Query: 442 MWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGH 489
MWN+RSENWARQYLGQQFYL VYS ANSWRDEYPIPSNALLCGRA+GH
Sbjct: 489 MWNVRSENWARQYLGQQFYLGVYSPANSWRDEYPIPSNALLCGRAIGH 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357453363|ref|XP_003596958.1| L-ascorbate oxidase-like protein [Medicago truncatula] gi|124360517|gb|ABN08527.1| Multicopper oxidase, type 1 [Medicago truncatula] gi|355486006|gb|AES67209.1| L-ascorbate oxidase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/466 (86%), Positives = 432/466 (92%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83
V N + LI+ NGVQQRRNSWQDGVYGTNCPIPPG+NFTYVLQVKDQIGSYFYFPSLA
Sbjct: 74 VFNSLDQPFLISWNGVQQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYFPSLA 133
Query: 84 FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 143
HKAAGGYGGIKI SRP+IPVPF PP+ DFTILAGDWY +NHTDLKAILD+GSDLP PDG
Sbjct: 134 LHKAAGGYGGIKINSRPMIPVPFPPPSNDFTILAGDWYNRNHTDLKAILDNGSDLPLPDG 193
Query: 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 203
L+INGRGSNA TFTVDQG TYRFRISNVG++TSINFRIQGHKM LVEVEG HTLQNTYDS
Sbjct: 194 LIINGRGSNAYTFTVDQGNTYRFRISNVGLTTSINFRIQGHKMKLVEVEGIHTLQNTYDS 253
Query: 204 LDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTT 263
LDIHLGQSYSVLV ADQPPQ YYIV STRFTSQ+L+ATS+LHYSNSA +VSGPPPGG T+
Sbjct: 254 LDIHLGQSYSVLVTADQPPQDYYIVASTRFTSQILTATSILHYSNSAKTVSGPPPGGLTS 313
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 323
QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTT TIRL+N+AP INGKQRYAVNSV
Sbjct: 314 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTRTIRLENSAPVINGKQRYAVNSV 373
Query: 324 SFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 383
SFIPADTPLKLADYFKI GVFS+GSIPDNPTGGG YLQTSVMAADFRG+ E+VFENPED+
Sbjct: 374 SFIPADTPLKLADYFKISGVFSLGSIPDNPTGGGGYLQTSVMAADFRGYVEIVFENPEDS 433
Query: 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+QSWHIDGH+FF VGMDGG+W+ ASR YNL DTISRCTVQVYPKSW+AVY+PLDNVGMW
Sbjct: 434 VQSWHIDGHHFFVVGMDGGQWSAASRSNYNLGDTISRCTVQVYPKSWSAVYMPLDNVGMW 493
Query: 444 NIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGH 489
N+RSENWARQYLGQQFYLRVYS ANSWRDEYPIPSNAL CGRAVGH
Sbjct: 494 NVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPSNALRCGRAVGH 539
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357453365|ref|XP_003596959.1| L-ascorbate oxidase-like protein [Medicago truncatula] gi|355486007|gb|AES67210.1| L-ascorbate oxidase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/457 (87%), Positives = 428/457 (93%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
++ NGVQQRRNSWQDGVYGTNCPIPPG+NFTYVLQVKDQIGSYFYFPSLA HKAAGGYG
Sbjct: 2 ILNRNGVQQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYFPSLALHKAAGGYG 61
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
GIKI SRP+IPVPF PP+ DFTILAGDWY +NHTDLKAILD+GSDLP PDGL+INGRGSN
Sbjct: 62 GIKINSRPMIPVPFPPPSNDFTILAGDWYNRNHTDLKAILDNGSDLPLPDGLIINGRGSN 121
Query: 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212
A TFTVDQG TYRFRISNVG++TSINFRIQGHKM LVEVEG HTLQNTYDSLDIHLGQSY
Sbjct: 122 AYTFTVDQGNTYRFRISNVGLTTSINFRIQGHKMKLVEVEGIHTLQNTYDSLDIHLGQSY 181
Query: 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQA 272
SVLV ADQPPQ YYIV STRFTSQ+L+ATS+LHYSNSA +VSGPPPGG T+QIDWSLEQA
Sbjct: 182 SVLVTADQPPQDYYIVASTRFTSQILTATSILHYSNSAKTVSGPPPGGLTSQIDWSLEQA 241
Query: 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPL 332
RSLRRNLTASGPRPNPQGSYHYGLINTT TIRL+N+AP INGKQRYAVNSVSFIPADTPL
Sbjct: 242 RSLRRNLTASGPRPNPQGSYHYGLINTTRTIRLENSAPVINGKQRYAVNSVSFIPADTPL 301
Query: 333 KLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH 392
KLADYFKI GVFS+GSIPDNPTGGG YLQTSVMAADFRG+ E+VFENPED++QSWHIDGH
Sbjct: 302 KLADYFKISGVFSLGSIPDNPTGGGGYLQTSVMAADFRGYVEIVFENPEDSVQSWHIDGH 361
Query: 393 NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452
+FF VGMDGG+W+ ASR YNL DTISRCTVQVYPKSW+AVY+PLDNVGMWN+RSENWAR
Sbjct: 362 HFFVVGMDGGQWSAASRSNYNLGDTISRCTVQVYPKSWSAVYMPLDNVGMWNVRSENWAR 421
Query: 453 QYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGH 489
QYLGQQFYLRVYS ANSWRDEYPIPSNAL CGRAVGH
Sbjct: 422 QYLGQQFYLRVYSPANSWRDEYPIPSNALRCGRAVGH 458
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 491 | ||||||
| TAIR|locus:2120648 | 541 | sks4 "SKU5 similar 4" [Arabido | 0.953 | 0.865 | 0.686 | 2.1e-178 | |
| TAIR|locus:2199798 | 541 | sks5 "SKU5 similar 5" [Arabido | 0.932 | 0.846 | 0.666 | 4.3e-173 | |
| TAIR|locus:2036911 | 551 | sks8 "SKU5 similar 8" [Arabido | 0.949 | 0.845 | 0.630 | 5.4e-166 | |
| TAIR|locus:2033513 | 542 | SKS6 "SKU5-similar 6" [Arabido | 0.932 | 0.845 | 0.642 | 6.2e-165 | |
| TAIR|locus:2201133 | 538 | sks7 "SKU5 similar 7" [Arabido | 0.973 | 0.888 | 0.608 | 4.5e-162 | |
| TAIR|locus:2121823 | 549 | sks9 "SKU5 similar 9" [Arabido | 0.934 | 0.836 | 0.619 | 1.4e-156 | |
| TAIR|locus:2132927 | 547 | sks10 "SKU5 similar 10" [Arabi | 0.924 | 0.829 | 0.595 | 3.3e-150 | |
| TAIR|locus:2174954 | 546 | sks17 "SKU5 similar 17" [Arabi | 0.945 | 0.849 | 0.533 | 2.3e-135 | |
| TAIR|locus:2092865 | 551 | sks13 "SKU5 similar 13" [Arabi | 0.926 | 0.825 | 0.538 | 4.6e-128 | |
| TAIR|locus:2193894 | 555 | sks12 "SKU5 similar 12" [Arabi | 0.926 | 0.819 | 0.524 | 6.1e-126 |
| TAIR|locus:2120648 sks4 "SKU5 similar 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1732 (614.8 bits), Expect = 2.1e-178, P = 2.1e-178
Identities = 322/469 (68%), Positives = 374/469 (79%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83
V N++ LI+ NGVQQR+NSWQDGV GT CPIPPGKNFTYV+QVKDQIGS++YFPSLA
Sbjct: 70 VFNYLKEPFLISWNGVQQRKNSWQDGVVGTTCPIPPGKNFTYVIQVKDQIGSFYYFPSLA 129
Query: 84 FHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 143
FH SRP IPVPF PP GDF +LAGDWYK NH L+ +L++G +LP PDG
Sbjct: 130 FHKAAGAFGAIRVWSRPRIPVPFSPPDGDFWLLAGDWYKTNHYVLRRLLEAGRNLPNPDG 189
Query: 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 203
++INGRG NTFTV GKTYRFRISNVG++TS+NFRIQGH M LVEVEG+HT+QN Y S
Sbjct: 190 VLINGRGWGGNTFTVQPGKTYRFRISNVGVATSLNFRIQGHTMKLVEVEGSHTVQNIYTS 249
Query: 204 LDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTT 263
LDIHLGQSYSVLV A+Q PQ YYIVIS+RFT +VL+ TS+LHY T
Sbjct: 250 LDIHLGQSYSVLVTANQAPQDYYIVISSRFTRKVLTTTSILHYSNSRKGVSGPVPNGPTL 309
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 323
I SL QAR++RRNLTASGPRPNPQGSYHYGLI TI L N+AP INGKQRYAVN
Sbjct: 310 DIASSLYQARTIRRNLTASGPRPNPQGSYHYGLIKPGRTIILANSAPWINGKQRYAVNGA 369
Query: 324 SFIPADTPLKLADYFKIPGVFSVGSIPDNPTGG-GAYLQTSVMAADFRGFAEVVFENPED 382
SF+ DTPLKLADYFKIPGVF++GSIP +P+GG G YLQ+SVMAA+FR F EVVF+N E+
Sbjct: 370 SFVAPDTPLKLADYFKIPGVFNLGSIPTSPSGGNGGYLQSSVMAANFREFIEVVFQNWEN 429
Query: 383 TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442
++QSWH+ G++FF VGMDGG+WTP SR YNLRD +SR TVQVYP++WTA+Y+ LDNVGM
Sbjct: 430 SVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRSTVQVYPRAWTAIYIALDNVGM 489
Query: 443 WNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
WNIRSENWARQYLGQQFYLRVY+S+ S+RDEYP P NAL+CGRA G T
Sbjct: 490 WNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALMCGRAKGRHT 538
|
|
| TAIR|locus:2199798 sks5 "SKU5 similar 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1682 (597.2 bits), Expect = 4.3e-173, P = 4.3e-173
Identities = 306/459 (66%), Positives = 360/459 (78%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
L++ NG+QQRRNS+ DGVYGT CPIPPGKN+TY+LQ+KDQIGS++YFPSL FH
Sbjct: 81 LLSWNGIQQRRNSFVDGVYGTTCPIPPGKNYTYILQMKDQIGSFYYFPSLGFHKAAGGFG 140
Query: 93 XXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
SRP IPVPF PAGD T+L GDWYK NHTDL+A LD+G LP PDG++INGR S
Sbjct: 141 GIRILSRPRIPVPFPDPAGDTTVLIGDWYKANHTDLRAQLDNGKKLPLPDGILINGRSSG 200
Query: 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212
A T V+QGKTYRFRISNVG+ S+NFRIQ HKM +VEVEGTHTLQ T+ SLD+H+GQSY
Sbjct: 201 A-TLNVEQGKTYRFRISNVGLQDSLNFRIQDHKMKVVEVEGTHTLQTTFSSLDVHVGQSY 259
Query: 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQA 272
SVLV ADQ P+ YY+V+S+RFTS VL+ T + Y T QIDWSL QA
Sbjct: 260 SVLVTADQTPRDYYVVVSSRFTSNVLTTTGIFRYSNSAGGVSGPIPGGPTIQIDWSLNQA 319
Query: 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPL 332
R++R NL+ASGPRPNPQGSYHYG+INTT TIRL ++A ++GKQRYAVNSVSF PADTPL
Sbjct: 320 RAIRTNLSASGPRPNPQGSYHYGMINTTRTIRLASSAGQVDGKQRYAVNSVSFKPADTPL 379
Query: 333 KLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH 392
K+ADYFKI GV+ GSI PTGGG YL TSVM D+R F E++FEN ED +QSWH+DG+
Sbjct: 380 KIADYFKIDGVYRSGSIQYQPTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGY 439
Query: 393 NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452
+F+ VGMDGG+W+P SR YNLRD ++RCTVQVYP SWTA+ + LDNVGMWN+RSE WAR
Sbjct: 440 SFWVVGMDGGQWSPDSRNEYNLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWAR 499
Query: 453 QYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
QYLGQQ YLRVY+ + S RDEYPIP NALLCGRA G T
Sbjct: 500 QYLGQQLYLRVYTPSTSLRDEYPIPKNALLCGRASGRST 538
|
|
| TAIR|locus:2036911 sks8 "SKU5 similar 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1615 (573.6 bits), Expect = 5.4e-166, P = 5.4e-166
Identities = 295/468 (63%), Positives = 353/468 (75%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83
V N + LI+ +G++ RNS+QDGVYGT CPIPPGKN+TY LQVKDQIGS++YFPSL
Sbjct: 73 VFNHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLG 132
Query: 84 FHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 143
FH SRP IPVPF PAGD+T+L GDWYK NH DL+A LD+G LPFPDG
Sbjct: 133 FHKAAGGFGAIRISSRPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDG 192
Query: 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 203
++INGRGS A T ++ GKTYR RISNVG+ S+NFRIQ HKM LVEVEGTHT+Q + S
Sbjct: 193 ILINGRGSGA-TLNIEPGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTIQTPFSS 251
Query: 204 LDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTT 263
LD+H+GQSYSVL+ ADQP + YYIV+S+RFTS++L VLHY
Sbjct: 252 LDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILITAGVLHYSNSAGPVSGPIPEA-PI 310
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 323
Q+ WS +QAR+++ NL ASGPRPNPQG+YHYG I T TI+L ++A INGKQRYAVNS
Sbjct: 311 QLRWSFDQARAIKTNLAASGPRPNPQGTYHYGKIKVTRTIKLASSAGNINGKQRYAVNSA 370
Query: 324 SFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 383
SF P DTPLKLADYFKI GV++ GSIPD PT G Y TSVM D++ F E+VFEN ED
Sbjct: 371 SFYPTDTPLKLADYFKIAGVYNPGSIPDQPTHGAIYPVTSVMQTDYKAFVEIVFENWEDI 430
Query: 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+Q+WH+DG++FF VGM+ G+W+ ASR YNL D +SRCTVQVYP+SWTA+YV LDNVGMW
Sbjct: 431 VQTWHLDGYSFFVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMW 490
Query: 444 NIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
N+RSE W RQYLGQQFY+RVY+ + S RDEY IP NALLCGRA GH T
Sbjct: 491 NLRSELWERQYLGQQFYMRVYTPSTSLRDEYLIPKNALLCGRATGHHT 538
|
|
| TAIR|locus:2033513 SKS6 "SKU5-similar 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1605 (570.0 bits), Expect = 6.2e-165, P = 6.2e-165
Identities = 295/459 (64%), Positives = 351/459 (76%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
LI+ NGVQ RRNS+ DG+YGT CPIPP N+TY+LQVKDQIGS++YFPSLAFH
Sbjct: 82 LISWNGVQNRRNSYVDGMYGTTCPIPPRSNYTYILQVKDQIGSFYYFPSLAFHKAAGGFG 141
Query: 93 XXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
SRP IPVPF PAGD+T+L GDWYK NHTDLK+ LD G LP PDG++INGR SN
Sbjct: 142 GIRILSRPGIPVPFADPAGDYTVLIGDWYKFNHTDLKSRLDRGRKLPSPDGILINGR-SN 200
Query: 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212
T V+QGKTYR RISNVG+ S+NFRIQ H+M LVEVEGTHTLQ + SLD+H+GQSY
Sbjct: 201 GATLNVEQGKTYRLRISNVGLQDSLNFRIQNHRMKLVEVEGTHTLQTMFSSLDVHVGQSY 260
Query: 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQA 272
SVL+ ADQ P+ YY+V+S+RFT ++++ T VL Y T Q+DWSL QA
Sbjct: 261 SVLITADQSPRDYYVVVSSRFTDKIITTTGVLRYSGSSTPASGPIPGGPTIQVDWSLNQA 320
Query: 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPL 332
R++R NLTASGPRPNPQGSYHYGLI TI ++A INGKQRY VNSVSF+PADTPL
Sbjct: 321 RAIRTNLTASGPRPNPQGSYHYGLIPLIRTIVFGSSAGQINGKQRYGVNSVSFVPADTPL 380
Query: 333 KLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH 392
KLAD+FKI GV+ + SI D PT GG YL TSV+ D+R F E+VFEN ED +QS+H++G+
Sbjct: 381 KLADFFKISGVYKINSISDKPTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGY 440
Query: 393 NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452
+F+ VGMDGG+W SR YNLRD +SR TVQVYPKSWTA+Y+ LDNVGMWN+RSE WAR
Sbjct: 441 SFWVVGMDGGQWKTGSRNGYNLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWAR 500
Query: 453 QYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
QYLGQQ YLRV++S+ S RDEYPIP N+ LCGRA G T
Sbjct: 501 QYLGQQLYLRVFTSSTSLRDEYPIPKNSRLCGRARGRHT 539
|
|
| TAIR|locus:2201133 sks7 "SKU5 similar 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1578 (560.5 bits), Expect = 4.5e-162, P = 4.5e-162
Identities = 294/483 (60%), Positives = 357/483 (73%)
Query: 11 GCSLITHLYTHLVVLNFIYM-AP-LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQ 68
G +I+ +L++ F ++ P L++ NG++ +NS+QDGVYGT CPIPPGKN+TY LQ
Sbjct: 58 GPDIISITNDNLIINVFNHLDEPFLLSWNGIRNWKNSFQDGVYGTMCPIPPGKNYTYALQ 117
Query: 69 VKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDL 128
VKDQIGS++YFPSL FH SR LIPVPF PA D+T+L GDWYK NH DL
Sbjct: 118 VKDQIGSFYYFPSLGFHKAAGGFGGIRISSRALIPVPFPTPADDYTLLVGDWYKTNHKDL 177
Query: 129 KAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL 188
KA LD+G LP PDG++INGR S A T ++ GKTYR RISNVG+ S+NFRIQ H M L
Sbjct: 178 KAQLDNGGKLPLPDGILINGRSSGA-TLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKL 236
Query: 189 VEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXX 248
VEVEG +T+QN + SLD+H+GQSYSVL+ ADQP + YY+V+S+RFTS++L+ T VLHY
Sbjct: 237 VEVEGRYTIQNLFSSLDVHVGQSYSVLITADQPAKDYYVVVSSRFTSKILTTTGVLHYSN 296
Query: 249 XXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNT 308
++ WS QAR++R NLTASGPRPNPQGSY YG+IN T TIRL N
Sbjct: 297 SVAPVSGPIPDG-PIKLSWSFNQARAIRTNLTASGPRPNPQGSYRYGVINITRTIRLANN 355
Query: 309 APTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAAD 368
I GKQRYAVNS SF PADTPLKL DYFKI GV+ GSI D PT G + TSVM AD
Sbjct: 356 LGHIEGKQRYAVNSASFYPADTPLKLVDYFKIDGVYKPGSISDQPTNGAIFPTTSVMQAD 415
Query: 369 FRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPK 428
FR F EV+FEN ED +QSWH+DG++F+ VGM+ G+W+PASR YNL D I RCT+QVYP+
Sbjct: 416 FRAFVEVIFENSEDIVQSWHLDGYSFYVVGMELGKWSPASRKVYNLNDAILRCTIQVYPR 475
Query: 429 SWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488
SWTA+Y+ LDNVGMWN+RSE W RQYLGQQFY+RVY+++ S RDEY IP NALLCGRA
Sbjct: 476 SWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRASS 535
Query: 489 -HR 490
HR
Sbjct: 536 SHR 538
|
|
| TAIR|locus:2121823 sks9 "SKU5 similar 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
Identities = 288/465 (61%), Positives = 345/465 (74%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
L++ NGVQ R+NS+QDGVYGT CPIPPGKN+TY +QVKDQIGS+FYFPSLA H
Sbjct: 83 LLSWNGVQLRKNSYQDGVYGTTCPIPPGKNYTYAIQVKDQIGSFFYFPSLAVHKAAGGFG 142
Query: 93 XXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRG-S 151
SRP IPVPF PAGDFT L GDW+K +H LKAILD G LP P G++ING+G S
Sbjct: 143 GFRILSRPRIPVPFPEPAGDFTFLIGDWFKHDHKVLKAILDRGHKLPLPQGVLINGQGVS 202
Query: 152 NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQS 211
++ TV +GKTYRFRISNVG+ ++NFRIQGH+M LVEVEGTHT+Q+ Y SLDIH+GQS
Sbjct: 203 YMSSITVHKGKTYRFRISNVGLQHTLNFRIQGHQMKLVEVEGTHTVQSMYTSLDIHVGQS 262
Query: 212 YSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQ----IDW 267
YSVLV DQP Q Y IV+ST+F ++ L +S +HY Q +DW
Sbjct: 263 YSVLVTMDQPDQDYDIVVSTKFVAKKLLVSSTIHYSNSRHSHSSSANSVHVQQPADELDW 322
Query: 268 SLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP 327
S++QARS+R NLTASGPRPNPQGSYHYG I + T+ L+++A + KQRYA+N VSF+P
Sbjct: 323 SIKQARSIRTNLTASGPRPNPQGSYHYGRIKISRTLILESSAALVKRKQRYAINGVSFVP 382
Query: 328 ADTPLKLADYFKIPGVFSVGSIPDNPTGG-GAYLQTSVMAADFRGFAEVVFENPEDTLQS 386
DTPLKLADYFKI GVF +GSIPD P G G ++TSVM A R F E++F+N E +QS
Sbjct: 383 GDTPLKLADYFKIKGVFKMGSIPDKPRRGRGMRMETSVMGAHHRDFLEIIFQNREKIVQS 442
Query: 387 WHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIR 446
+H+DG++F+ VG D G W+ ASR YNLRD ISR T QVYP+SWTAVYV LDNVGMWN+R
Sbjct: 443 YHLDGYSFWVVGTDRGTWSKASRREYNLRDAISRSTTQVYPESWTAVYVALDNVGMWNLR 502
Query: 447 SENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
SE WARQYLGQQFYLRVYS +S RDEY +P NALLCGRA T
Sbjct: 503 SEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNALLCGRASNKHT 547
|
|
| TAIR|locus:2132927 sks10 "SKU5 similar 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1466 (521.1 bits), Expect = 3.3e-150, P = 3.3e-150
Identities = 272/457 (59%), Positives = 335/457 (73%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
L++ NGV R+NS+QDGVYGTNCPIPPGKN+TY QVKDQ+GSYFYFPSLA
Sbjct: 81 LLSWNGVHMRKNSYQDGVYGTNCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYG 140
Query: 93 XXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVINGRG- 150
S P IPVPF PA DFT L DWY++NHT LK ILD G LP PDG++ING+G
Sbjct: 141 SLRIYSLPRIPVPFPEPAEDFTFLVNDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGV 200
Query: 151 SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 210
S + TVD+GKTYRFR+SNVG+ TS+N I GH++ L+EVEGTHT+Q Y SLDIH+GQ
Sbjct: 201 STVYSITVDKGKTYRFRVSNVGLQTSLNLEILGHQLKLIEVEGTHTVQTMYTSLDIHVGQ 260
Query: 211 SYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLE 270
+YS LV DQPPQ Y IV+STRF + + + LHY ++WS++
Sbjct: 261 TYSFLVTMDQPPQNYSIVVSTRFINAEVVIRATLHYSNSKGHKIITARRPDPDDVEWSIK 320
Query: 271 QARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADT 330
QA+S+R NLTASGPR NPQGSYHYG + + T+ L+++A + KQRYA+N VSF+P+DT
Sbjct: 321 QAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDT 380
Query: 331 PLKLADYFKIPGVFSVGSIPDNPT-GGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHI 389
PLKLAD+FKI VF VG+IPD P GGG L T+VM A F E++F+N E +QS+H+
Sbjct: 381 PLKLADHFKIKDVFKVGTIPDKPRRGGGIRLDTAVMGAHHNAFLEIIFQNREKIVQSYHL 440
Query: 390 DGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSEN 449
DG+NF+ VG++ G W+ ASR YNL+D ISR T QVYPKSWTAVYV LDNVGMWN+RS+
Sbjct: 441 DGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPKSWTAVYVALDNVGMWNLRSQF 500
Query: 450 WARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRA 486
WARQYLGQQFYLRV+S +S +DEYP+P NALLCGRA
Sbjct: 501 WARQYLGQQFYLRVHSPNHSPKDEYPLPKNALLCGRA 537
|
|
| TAIR|locus:2174954 sks17 "SKU5 similar 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1326 (471.8 bits), Expect = 2.3e-135, P = 2.3e-135
Identities = 250/469 (53%), Positives = 318/469 (67%)
Query: 23 VVLNFIYMA--P-LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYF 79
++LN I P L+T NG++QR+NSWQDGV GTNCPI P NFTY Q KDQIG++ YF
Sbjct: 77 IILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIQPNSNFTYKFQTKDQIGTFNYF 136
Query: 80 PSLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLP 139
PS AFH +RP IP+P+ P DFT+L GDW+K NH L+ LDSG LP
Sbjct: 137 PSTAFHKAAGGFGAINVYARPGIPIPYPLPTADFTLLVGDWFKTNHKTLQQRLDSGGVLP 196
Query: 140 FPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQN 199
FPDG++ING+ +TF+ DQGKTY RISNVG+S++ NFRIQGH M +VEVEG+H +Q
Sbjct: 197 FPDGMLINGQ--TQSTFSGDQGKTYMLRISNVGLSSTFNFRIQGHTMKVVEVEGSHVIQT 254
Query: 200 TYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXX 259
YDSLDIH+GQS +VLV +Q P+ YYIV STRF LS +L Y
Sbjct: 255 DYDSLDIHVGQSLAVLVTLNQSPKDYYIVASTRFIRSKLSVMGLLRYSNSRVPASGDPPA 314
Query: 260 XXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYA 319
++ WS+ QAR+ R NLTA+ RPNPQGS+HYG+I+ T T N+AP INGKQRYA
Sbjct: 315 LPPGELVWSMRQARTFRWNLTANAARPNPQGSFHYGMISPTKTFVFSNSAPLINGKQRYA 374
Query: 320 VNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFEN 379
VN VS++ ++TPLKLAD+F I GVFS +I P+ + TSV+ F E+VF+N
Sbjct: 375 VNGVSYVKSETPLKLADHFGISGVFSTNAIQSVPSNSPPTVATSVVQTSHHDFLEIVFQN 434
Query: 380 PEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 439
E ++QSWH+DG++F+ VG G+WTPA R +NL D ++R T QVYP+SWT + V LDN
Sbjct: 435 NEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNLVDALTRHTTQVYPESWTTILVSLDN 494
Query: 440 VGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488
GMWN+RS W RQY GQQFYL+V++S S +EY P N LCG+AVG
Sbjct: 495 QGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEYNPPDNLQLCGKAVG 543
|
|
| TAIR|locus:2092865 sks13 "SKU5 similar 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1257 (447.5 bits), Expect = 4.6e-128, P = 4.6e-128
Identities = 250/464 (53%), Positives = 302/464 (65%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
L+T +G+Q R+NSWQDGV GT+CPIP G NFTY Q KDQIGSYFY+PS A H
Sbjct: 80 LLTWSGLQHRKNSWQDGVTGTSCPIPAGTNFTYHFQPKDQIGSYFYYPSTALHRFAGGFG 139
Query: 93 XXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGR--- 149
SR LIPVP+ P D TIL DWY K+HT LK LDSG L PDG++ING+
Sbjct: 140 GLRVNSRLLIPVPYADPEDDRTILINDWYAKSHTALKNFLDSGRTLGSPDGVLINGKSGK 199
Query: 150 --GSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
G+NA FT+ GKTY++RI NVG +++NFRIQGHKM LVE+EG+H LQN YDSLD+H
Sbjct: 200 LGGNNAPLFTMKPGKTYKYRICNVGFKSTLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVH 259
Query: 208 LGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDW 267
+GQ ++VLV ADQ + YY+V STRF + +S V+ Y W
Sbjct: 260 VGQCFAVLVTADQVAKNYYMVASTRFLKKEVSTVGVMSYEGSNVQASSDIPKAPVGWA-W 318
Query: 268 SLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP 327
SL Q RS R NLTAS RPNPQGSYHYG IN T TI+L NT +NGK R+ N VS +
Sbjct: 319 SLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLANTKNLVNGKVRFGFNGVSHVD 378
Query: 328 ADTPLKLADYFKIPG-VFSVGSIPDNPTGGGAYL--QTSVMAADFRGFAEVVFENPEDTL 384
+TPLKLA+YF + VF I D P L + +V+ FR F EVVFEN E ++
Sbjct: 379 TETPLKLAEYFGMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEVVFENHEKSM 438
Query: 385 QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444
QS+H+DG++FFAV + G WTP R YNL D +SR TVQVYPKSW+A+ + DN GMWN
Sbjct: 439 QSFHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWN 498
Query: 445 IRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488
IRSENW R+YLGQQ Y+ V S S RDEY IP N LCG G
Sbjct: 499 IRSENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKG 542
|
|
| TAIR|locus:2193894 sks12 "SKU5 similar 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 244/465 (52%), Positives = 298/465 (64%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXX 92
LIT G+Q R+N WQDG GT CPIPPG+NFTY Q KDQIGSYFY+P+ A H
Sbjct: 82 LITWAGIQHRKNCWQDGTAGTMCPIPPGQNFTYHFQPKDQIGSYFYYPTTAMHRAAGGFG 141
Query: 93 XXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGR--- 149
SR LIPVP+ P D+TIL DWY K+HT LK LDSG + PDG++ING+
Sbjct: 142 GLRVNSRLLIPVPYADPEDDYTILINDWYTKSHTQLKKFLDSGRTIGRPDGILINGKSGK 201
Query: 150 --GSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
GS+ FT+ GKTYR RI NVG+ S+NFRIQ HKM LVE+EG+H LQN YDSLD+H
Sbjct: 202 TDGSDKPLFTLKPGKTYRVRICNVGLKASLNFRIQNHKMKLVEMEGSHVLQNDYDSLDVH 261
Query: 208 LGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDW 267
+GQ + V+V ADQ P+ YY++ STRF + L+ T +L Y W
Sbjct: 262 VGQCFGVIVTADQEPKDYYMIASTRFLKKPLTTTGLLRYEGGKGPASSQLPAAPVGWA-W 320
Query: 268 SLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP 327
SL Q RS R NLTAS RPNPQGSYHYG IN T TI+L NT ++GK RYA++ VS
Sbjct: 321 SLNQYRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRYALSGVSHTD 380
Query: 328 ADTPLKLADYFKIPG-VFSVGSIPDNPTGG---GAYLQTSVMAADFRGFAEVVFENPEDT 383
+TPLKLA+YF + VF +I DNP ++ +V+ R F EVVFEN E +
Sbjct: 381 PETPLKLAEYFGVADKVFKYDTISDNPNPDQIKNIKIEPNVLNITHRTFIEVVFENHERS 440
Query: 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+QSWH+DG++FFAV ++ G WTP R YNL D +SR TVQVYPK W A+ + DN GMW
Sbjct: 441 VQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMW 500
Query: 444 NIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488
NIRSEN R+YLGQQ Y V S S RDEY +P +L CG G
Sbjct: 501 NIRSENAERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKG 545
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P29162 | ASOL_TOBAC | 1, ., 1, 0, ., 3, ., - | 0.5149 | 0.9266 | 0.8212 | N/A | no |
| Q00624 | ASOL_BRANA | 1, ., 1, 0, ., 3, ., - | 0.5466 | 0.9185 | 0.8126 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 491 | |||
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 0.0 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 0.0 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 0.0 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 0.0 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 0.0 | |
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 1e-157 | |
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 7e-53 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 4e-48 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 2e-46 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 3e-44 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 5e-42 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 3e-30 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 6e-21 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 4e-18 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 2e-15 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 7e-09 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 695 bits (1796), Expect = 0.0
Identities = 317/468 (67%), Positives = 378/468 (80%), Gaps = 2/468 (0%)
Query: 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83
V N + LI+ +G++ RNS+QDGVYGT CPIPPGKN+TY LQVKDQIGS++YFPSL
Sbjct: 73 VFNHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLG 132
Query: 84 FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 143
FHKAAGG+G I+I+SRPLIPVPF PA D+T+L GDWYK NH DL+A LD+G LP PDG
Sbjct: 133 FHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDNGGKLPLPDG 192
Query: 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 203
++INGRGS A T ++ GKTYR RISNVG+ S+NFRIQ H M LVEVEGTHT+Q + S
Sbjct: 193 ILINGRGSGA-TLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSS 251
Query: 204 LDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTT 263
LD+H+GQSYSVL+ ADQP + YYIV+S+RFTS++L T VLHYSNSAG VSGP P GP
Sbjct: 252 LDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSAGPVSGPIPDGPI- 310
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 323
Q+ WS +QAR+++ NLTASGPRPNPQGSYHYG IN T TIRL N+A I GKQRYAVNS
Sbjct: 311 QLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSA 370
Query: 324 SFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 383
SF PADTPLKLADYFKI GV++ GSIPD PT G + TSVM D++ F E+VFEN ED
Sbjct: 371 SFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDI 430
Query: 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+Q+WH+DG++F+ VGM+ G+W+ ASR YNL D +SRCTVQVYP+SWTA+YV LDNVGMW
Sbjct: 431 VQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMW 490
Query: 444 NIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
N+RSE W RQYLGQQFY+RVY+++ S RDEY IP NALLCGRA GH T
Sbjct: 491 NLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATGHHT 538
|
Length = 543 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 667 bits (1722), Expect = 0.0
Identities = 291/459 (63%), Positives = 351/459 (76%), Gaps = 2/459 (0%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L+T NG++QR+NSWQDGV GTNCPIPP N+TY Q KDQIG++ YFPS FHKAAGG+G
Sbjct: 83 LLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFG 142
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
I + RP IP+PF P GDFT+L GDWYK +H L+ LDSG LPFPDG++ING+ +
Sbjct: 143 AINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLDSGKVLPFPDGVLINGQTQS 202
Query: 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212
TF+ DQGKTY FRISNVG+STS+NFRIQGH M LVEVEG+HT+QN YDSLD+H+GQS
Sbjct: 203 --TFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSV 260
Query: 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQA 272
+VLV +Q P+ YYIV STRFT Q+L+AT+VLHYSNS SGP P P+ ++ WS+ QA
Sbjct: 261 AVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQA 320
Query: 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPL 332
R+ R NLTAS RPNPQGS+HYG I T TI L N+AP INGKQRYAVN VS++ +DTPL
Sbjct: 321 RTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPL 380
Query: 333 KLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGH 392
KLADYF IPGVFSV SI P+GG A++ TSVM F EVVF+N E T+QSWH+DG+
Sbjct: 381 KLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGY 440
Query: 393 NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452
+F+ VG G+WTPA R YNL D ++R T QVYPKSWT + V LDN GMWN+RS W R
Sbjct: 441 DFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWER 500
Query: 453 QYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 491
QYLGQQFYLRV++ +S +EY IP NALLCG+A+G
Sbjct: 501 QYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIGRHP 539
|
Length = 539 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 654 bits (1688), Expect = 0.0
Identities = 292/457 (63%), Positives = 355/457 (77%), Gaps = 3/457 (0%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L++ NGV R+NS+QDGVYGT CPIPPGKN+TY QVKDQ+GSYFYFPSLA KAAGGYG
Sbjct: 70 LLSWNGVHMRKNSYQDGVYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYG 129
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLP-FPDGLVINGRG- 150
++I S P IPVPF PAGDFT L GDWY++NHT LK ILD G LP PDG++ING+G
Sbjct: 130 SLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGV 189
Query: 151 SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 210
S + TVD+GKTYRFRISNVG+ TS+NF I GH++ L+EVEGTHT+Q+ Y SLDIH+GQ
Sbjct: 190 SYVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQ 249
Query: 211 SYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLE 270
+YSVLV DQPPQ Y IV+STRF + + +S LHYSNS G ++WS++
Sbjct: 250 TYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSKGHKIIHARQPDPDDLEWSIK 309
Query: 271 QARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADT 330
QA+S+R NLTASGPR NPQGSYHYG + + T+ L+++A + KQRYA+N VSF+P+DT
Sbjct: 310 QAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDT 369
Query: 331 PLKLADYFKIPGVFSVGSIPDNP-TGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHI 389
PLKLAD+FKI GVF VGSIPD P GGG L TSVM A F E++F+N E +QS+H+
Sbjct: 370 PLKLADHFKIKGVFKVGSIPDKPRRGGGMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHL 429
Query: 390 DGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSEN 449
DG+NF+ VG++ G W+ ASR YNL+D ISR T QVYP+SWTAVYV LDNVGMWN+RS+
Sbjct: 430 DGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQF 489
Query: 450 WARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRA 486
WARQYLGQQFYLRVYS +S +DEYP+P NALLCGRA
Sbjct: 490 WARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRA 526
|
Length = 536 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 642 bits (1658), Expect = 0.0
Identities = 266/464 (57%), Positives = 329/464 (70%), Gaps = 9/464 (1%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L+T +G+QQR+NSWQDGV GTNCPIPPG NFTY Q KDQIGSYFY+PS H+AAGG+G
Sbjct: 81 LLTWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFG 140
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGR--- 149
G+++ SR LIPVP+ P D+T+L GDWY K+HT LK LDSG L PDG++ING+
Sbjct: 141 GLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTALKKFLDSGRTLGRPDGVLINGKSGK 200
Query: 150 --GSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
G + FT+ GKTYR+RI NVG+ +S+NFRIQGHKM LVE+EG+H LQN YDSLD+H
Sbjct: 201 GDGKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVH 260
Query: 208 LGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDW 267
+GQ +SVLV A+Q P+ YY+V STRF +VL+ T ++ Y G S P P W
Sbjct: 261 VGQCFSVLVTANQAPKDYYMVASTRFLKKVLTTTGIIRYEGGKGPASPELPEAPVGWA-W 319
Query: 268 SLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP 327
SL Q RS R NLTAS RPNPQGSYHYG IN T TI+L N+A ++GK RYA+N VS +
Sbjct: 320 SLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVSHVD 379
Query: 328 ADTPLKLADYFKIP-GVFSVGSIPDNPTG--GGAYLQTSVMAADFRGFAEVVFENPEDTL 384
+TPLKLA+YF + VF +I DNP +Q +V+ FR F E++FEN E ++
Sbjct: 380 PETPLKLAEYFGVADKVFKYDTIKDNPPAKITKIKIQPNVLNITFRTFVEIIFENHEKSM 439
Query: 385 QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444
QSWH+DG++FFAV ++ G WTP R YNL D +SR TVQVYPKSW A+ + DN GMWN
Sbjct: 440 QSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILLTFDNAGMWN 499
Query: 445 IRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488
IRSENW R+YLGQQ Y V S S RDEY +P NALLCG+ G
Sbjct: 500 IRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGKVKG 543
|
Length = 552 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 536 bits (1383), Expect = 0.0
Identities = 238/464 (51%), Positives = 297/464 (64%), Gaps = 11/464 (2%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L+T NG+Q R+NSWQDGV GTNCPI PG N+TY QVKDQIGSYFYFPSL KAAGGYG
Sbjct: 80 LMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYG 139
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
I+I + L+PVPF P ++ IL GDW+ +HT ++A LD+G LP PDG++ NGRG
Sbjct: 140 AIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDNGHSLPNPDGILFNGRGPE 199
Query: 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212
F + GKTYR RISNVG+ T +NFRIQ H MLLVE EGT+ + Y SLDIH+GQSY
Sbjct: 200 ETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQSY 259
Query: 213 SVLVRADQPPQG----YYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQ-IDW 267
SVLV A P G YYIV + RFT L +++ Y NS GP P P
Sbjct: 260 SVLVTAKTDPVGIYRSYYIVATARFTDAYLGGVALIRYPNSPLDPVGPLPLAPALHDYFS 319
Query: 268 SLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP 327
S+EQA S+R +L R NPQGSYHYG IN T TI L N +GK RY +N VSF+
Sbjct: 320 SVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVY 379
Query: 328 ADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSW 387
TPLKL D+F++ G P P+ L TSV+ ++ F +VF+NP +L+S+
Sbjct: 380 PGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFYHIVFQNPLFSLESY 439
Query: 388 HIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRS 447
HIDG+NFF VG G W+ + + YNL D +SR TVQVYP SWTA+ + +DN GMWN+RS
Sbjct: 440 HIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRS 499
Query: 448 ENWARQYLGQQFYLRVYS------SANSWRDEYPIPSNALLCGR 485
+ + YLGQ+ Y+RV S RDE PIP N + CG+
Sbjct: 500 QKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCGK 543
|
Length = 545 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 458 bits (1179), Expect = e-157
Identities = 237/474 (50%), Positives = 308/474 (64%), Gaps = 23/474 (4%)
Query: 33 LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
L+T +GVQQR+++WQDGV GTNC IP G N+TY QVKDQ+GS+FY PS A H+AAGGYG
Sbjct: 83 LLTWHGVQQRKSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYG 142
Query: 93 GIKIASRPLIPVPFD-PPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS 151
I I +R +IP+PF P GD T+ DWY ++H L+ LD+G L PDG++IN G
Sbjct: 143 AITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRALDAGDLLGAPDGVLINAFGP 202
Query: 152 ------------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQN 199
VD GKTYRFR+ NVG++TS+NFRIQGH +LLVE EG++T Q
Sbjct: 203 YQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQ 262
Query: 200 TYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFTSQV----LSATSVLHYSNSAGSVS 254
Y +LDIH+GQSYS L+ DQ YY+V S RF L+ ++LHYSNS G S
Sbjct: 263 NYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPAS 322
Query: 255 GPPPGGPTTQID--WSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPT- 311
GP P P Q D +S+ QARS+R N+TASG RPNPQGS+HYG I T LQ+ AP
Sbjct: 323 GPLPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPEL 382
Query: 312 INGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRG 371
I+GK R +N +S+I TPL LA F +PGVF + P++P L TS++ ++G
Sbjct: 383 IDGKLRATLNEISYIAPSTPLMLAQIFNVPGVFKL-DFPNHPMNRLPKLDTSIINGTYKG 441
Query: 372 FAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWT 431
F E++F+N +QS+H+DG+ FF VGMD G WT SR TYN D ++R T+QV+P +WT
Sbjct: 442 FMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWT 501
Query: 432 AVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSA-NSWRDEYPIPSNALLCG 484
A+ V LDN G+WN+R EN YLGQ+ Y+ V + NS + PIP NA+ CG
Sbjct: 502 AILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCG 555
|
Length = 596 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 186 bits (474), Expect = 7e-53
Identities = 141/468 (30%), Positives = 208/468 (44%), Gaps = 79/468 (16%)
Query: 34 ITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
I +G++Q W DG G T C I PG+ F Y V D+ G+YFY ++AG YG
Sbjct: 57 IHWHGIRQIGTPWADGTAGVTQCAINPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYG 115
Query: 93 GIKIASRPLIPVPF--DPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPF-----PDGLV 145
+ + PF D G+F +L DW+ K+ + + L S P P L+
Sbjct: 116 SLIVDVPDGEKEPFHYD---GEFNLLLSDWWHKSIHEQEVGLSS---KPMRWIGEPQSLL 169
Query: 146 INGRG----SNANT---------------------FTVDQGKTYRFRISNVGISTSINFR 180
INGRG S A V+ GKTYR RI++ ++NF
Sbjct: 170 INGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFA 229
Query: 181 IQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTR----FTS 235
I+GHK+ +VE +G + T +DI+ G++YSVL+ DQ P + Y+I + R T
Sbjct: 230 IEGHKLTVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTP 289
Query: 236 QVLSATSVLHYSNSAGSV--SGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYH 293
+VL+Y ++ S PPP P D+ +A SL + A+ P P +
Sbjct: 290 P---GLTVLNYYPNSPSRLPPTPPPVTPAWD-DFDRSKAFSLA--IKAAMGSPKPPETSD 343
Query: 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTP--------LKLADYFKIPG--- 342
I L NT ING ++A+N+VS TP L A K P
Sbjct: 344 -------RRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENY 396
Query: 343 -----VFSVGSIPDNPTGGGAY-LQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFA 396
+F P+ TG G Y L+ + A + N +T WH+ GH+F+
Sbjct: 397 PRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSET-HPWHLHGHDFWV 455
Query: 397 VGMDGGEWTPA-SRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+G G++ P +YNL++ R TV ++P WTA+ DN G+W
Sbjct: 456 LGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVW 503
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 4e-48
Identities = 63/146 (43%), Positives = 84/146 (57%), Gaps = 7/146 (4%)
Query: 111 GDFTILAGDWYKKNHTDLKAILDSGSD-----LPFPDGLVINGRGSNAN-TFTVDQGKTY 164
D+ I DWY K+ DL+ L + P PD ++ING+ + T TV GKTY
Sbjct: 1 EDYVITLSDWYHKDAKDLEKELLASGKAPTDFPPVPDAVLINGKDGASLATLTVTPGKTY 60
Query: 165 RFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG 224
R RI NV + S+NF I+GHKM +VEV+G + T DSLDI GQ YSVLV A+Q P
Sbjct: 61 RLRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYSVLVTANQDPGN 120
Query: 225 YYIVISTRFTS-QVLSATSVLHYSNS 249
Y+IV S + +A ++L YS +
Sbjct: 121 YWIVASPNIPAFDNGTAAAILRYSGA 146
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 2e-46
Identities = 138/467 (29%), Positives = 216/467 (46%), Gaps = 74/467 (15%)
Query: 33 LITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGY 91
+I +G++Q+ + W DG G T C I PG+ FTY V ++ G++FY ++AG Y
Sbjct: 78 VIHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTV-EKPGTHFYHGHYGMQRSAGLY 136
Query: 92 GG--IKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPF-----PDGL 144
G + +A P + +D G+F +L DW+ H + + S P +
Sbjct: 137 GSLIVDVAKGPKERLRYD---GEFNLLLSDWW---HESIPSQELGLSSKPMRWIGEAQSI 190
Query: 145 VINGRG----SNANTFT----------------------VDQGKTYRFRISNVGISTSIN 178
+INGRG S A F+ V+ KTYR R+++ S+N
Sbjct: 191 LINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLN 250
Query: 179 FRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTR-FTSQ 236
+QGHK+++VE +G + T D +DI+ G+SYSVL+ DQ P Q YYI + R
Sbjct: 251 LAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPN 310
Query: 237 VLSATSVLHYSNSAGS--VSGPPPGGPTTQIDWS-LEQARSLRRNLTASGPRPNPQGSYH 293
A ++L+Y + S S PPP P W E++++ + + ++ P+P Y
Sbjct: 311 TTQALTILNYVTAPASKLPSSPPPVTPR----WDDFERSKNFSKKIFSAMGSPSPPKKYR 366
Query: 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTP--------LKLADYFKIPGV-- 343
LI L NT I+G ++A+N+VS + TP LKL K P
Sbjct: 367 KRLI-------LLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSY 419
Query: 344 ---FSVGSIPDNP---TGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAV 397
+ + + P P TG G Y+ + D V + + WH+ GH+F+ +
Sbjct: 420 RMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVL 479
Query: 398 GMDGGEWTPA-SRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
G G++ P TYNL++ R T +YP WTA+ DN G+W
Sbjct: 480 GYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVW 526
|
Length = 574 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 3e-44
Identities = 137/467 (29%), Positives = 209/467 (44%), Gaps = 77/467 (16%)
Query: 34 ITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
I +G++Q W DG G T CPI PG+ FTY V D+ G+Y Y + AG YG
Sbjct: 80 IHWHGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYG 138
Query: 93 GIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPF-----PDGLVIN 147
I+++ PF D +I+ DWY K+ + L S +PF P L+I
Sbjct: 139 SIRVSLPRGKSEPFSYDY-DRSIILTDWYHKSTYEQALGLSS---IPFDWVGEPQSLLIQ 194
Query: 148 GRG-------------------SNANTF----TVDQGKTYRFRISNVGISTSINFRIQGH 184
G+G +N TV GKTYR RIS++ ++++F+I+GH
Sbjct: 195 GKGRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYRLRISSLTALSALSFQIEGH 254
Query: 185 KMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLS----- 239
M +VE +G + +L I+ G++YSVLV+ADQ P Y V T+ V+S
Sbjct: 255 NMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWV-----TTSVVSRNNTT 309
Query: 240 --ATSVLHYSNSAGSVSGP--PPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHY 294
++ +Y + S P PP GP ++ L Q+ +++ G H
Sbjct: 310 PPGLAIFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLAIKAR----------HGYIHP 359
Query: 295 GLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDN-- 352
+ + I L NT +NG +R++VN+VSF TP +A + G F P+
Sbjct: 360 PPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYD 419
Query: 353 ---------PTGGGAYLQTSVMAADFRGFAEVVFENPE------DTLQSWHIDGHNFFAV 397
P A S+ F +++ +N WH+ GH+F+ +
Sbjct: 420 FANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVL 479
Query: 398 GMDGGEWTPASR-LTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
G G++ +S YNL D I + TV V+P WTA+ DN G+W
Sbjct: 480 GYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVW 526
|
Length = 566 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 5e-42
Identities = 131/450 (29%), Positives = 198/450 (44%), Gaps = 56/450 (12%)
Query: 38 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96
GV+Q RN W DG Y T CPI PG+++ Y + Q G+ ++ +++ +A YG I I
Sbjct: 62 GVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRATV-YGAIVI 120
Query: 97 ASRPLIPVPFDPPAGDFTILAGDWYKKN-HTDLKAILDSGSDLPFPDGLVINGRG----- 150
+P +P PF P + I+ G+W+ + + +G D ING
Sbjct: 121 LPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYN 180
Query: 151 -SNANTF--TVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
S+ +TF TV+ GKTY RI N ++ + F I H + +VEV+ T+T ++ I
Sbjct: 181 CSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240
Query: 208 LGQSYSVLVRADQPPQGYYIVISTRFTSQV----LSATSVLHYSNSAGSV-----SGPPP 258
GQ+ +VL+ ADQ P Y++ + + T++L Y ++ S + P
Sbjct: 241 PGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAY 300
Query: 259 GGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRL------QNTAPTI 312
++S + RSL +A P P TI L NT
Sbjct: 301 NDTAAATNFS-NKLRSLN---SAQYPANVPVTIDR----RLFFTIGLGLDPCPNNTCQGP 352
Query: 313 NGKQRYA-VNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNP--------TGGGAYLQTS 363
NG + A +N++SF+ T L A YF I GVF+ P NP T L T+
Sbjct: 353 NGTRFAASMNNISFVMPTTALLQAHYFGISGVFTT-DFPANPPTKFNYTGTNLPNNLFTT 411
Query: 364 ----VMAADFRGFAEVVFEN-----PEDTLQSWHIDGHNFFAVGMDGGEWTPASR-LTYN 413
V+ F E+V ++ E+ H+ G+NFF VG G + P +N
Sbjct: 412 NGTKVVRLKFNSTVELVLQDTSILGSEN--HPIHLHGYNFFVVGTGFGNFDPKKDPAKFN 469
Query: 414 LRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
L D R TV V W A+ DN G+W
Sbjct: 470 LVDPPERNTVGVPTGGWAAIRFVADNPGVW 499
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 3e-30
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Query: 329 DTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWH 388
DTP KL +I G + P G T V+ E+V +N +H
Sbjct: 1 DTPPKLPTLLQITGGNDRANWS--PDNGPPLGTTEVITLPNGDRVEIVLQNNTMGPHPFH 58
Query: 389 IDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSE 448
+ GH+F +G GG WTP + TYNL D + R TVQV P W A+ DN G W
Sbjct: 59 LHGHSFQVLGRGGGPWTPTA--TYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFHCH 116
Query: 449 NWARQYLGQQFYLRVY 464
+L Q +
Sbjct: 117 IL--WHLDQGMMGQFV 130
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 6e-21
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 23 VVLNFIYMAP---LITLNGVQQRRNSWQDGV-YGTNCPIPPGKNFTYVLQVKDQIGSYFY 78
VV+N I +G++Q W DGV T CPIPPG++FTY VK Q G+Y+Y
Sbjct: 36 VVVNVTNNLDEPTTIHWHGLRQPGTPWADGVPGVTQCPIPPGESFTYRFTVKQQAGTYWY 95
Query: 79 FPSLAFHK-AAGGYGGIKIASRP 100
++ + AAG YG I I
Sbjct: 96 HSHTSWLQQAAGLYGAIIIEDPA 118
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 4e-18
Identities = 117/487 (24%), Positives = 188/487 (38%), Gaps = 94/487 (19%)
Query: 38 GVQQRRNSWQDGV-YGTNCPIPPGKNFTYVLQVK-DQIGSYFYFPSLAFHKAAGGYGGIK 95
G+ QR + DG + PIPPG F Y ++ + GSYFY + F
Sbjct: 68 GLTQRTAPFSDGTPLASQWPIPPGHFFDYEIKPEPGDAGSYFYHSHVGFQ--------AV 119
Query: 96 IASRPLIPVPFDPPA----GDFTILAGDWYKKNHTDLKAILDSGSDLPF-----PDGLVI 146
A PLI +PP + +L D++ +++ L S PF + +++
Sbjct: 120 TAFGPLIVEDCEPPPYKYDDERILLVSDFFSATDEEIEQGLLS---TPFTWSGETEAVLL 176
Query: 147 NGRGSNANTFT--------------VDQGKTYRFR-ISNVGISTSINFRIQGHK-MLLVE 190
NG+ N + + V+ GKTYR R I +S I+ I+ H+ + ++E
Sbjct: 177 NGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATALSL-ISLGIEDHENLTIIE 235
Query: 191 VEGTHTLQNTYDSLDIHLGQSYSVLVRA---DQPPQG----YYIVISTRFTSQVLSATSV 243
+G++T D L + GQ YSVL +A D+ G Y+I TR +V +V
Sbjct: 236 ADGSYTKPAKIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRPKVYRGYAV 295
Query: 244 LHYSNSAGS----VSGPPP-GGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298
L Y + S V PP P + DW + L P L
Sbjct: 296 LRYRSDKASKLPSVPETPPLPLPNSTYDWLEYELEPLSEENNQDFPT----------LDE 345
Query: 299 TTHTIRL---QNTAPTINGKQRYAVNSVSFIPA--DTPLKLADYFKIPGVFSVGSIPDNP 353
T + + QN P NG+ + N +S+ + TP L D ++ + + P+
Sbjct: 346 VTRRVVIDAHQNVDPL-NGRVAWLQNGLSWTESVRQTPY-LVDIYE----NGLPATPNYT 399
Query: 354 ---TGGGAYLQTSVMAADFRGFAEVVFENPEDTLQS--------WHIDGHNFFAVGMDGG 402
G +T A E+V++N +H G +F+ +G G
Sbjct: 400 AALANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDG 459
Query: 403 EWTPAS---RL---TYNLRDTI-----SRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWA 451
E+ + +L T LRDT + V P W A + + N G+W +
Sbjct: 460 EYNATANEAKLENYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQ 519
Query: 452 RQYLGQQ 458
+G Q
Sbjct: 520 HMVMGMQ 526
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 2e-15
Identities = 82/403 (20%), Positives = 114/403 (28%), Gaps = 77/403 (19%)
Query: 46 WQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPV 104
DGV T P PG+ TY D G+Y+Y P G G + +I
Sbjct: 98 EMDGVPPLTQIPPGPGETPTYTFTQ-DVPGTYWYHPHTHGQVYDGLAGAL------IIED 150
Query: 105 PFDPPAG---DFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQG 161
P G + IL DW ++ TDL + P LV NG F G
Sbjct: 151 ENSEPLGVDDEPVILQDDWLDEDGTDLYQEGPAMGGFPGDTLLV-NGA---ILPFKAVPG 206
Query: 162 KTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 221
R R+ N G + + + + G + ++ V+G + D L + G+ Y VLV D
Sbjct: 207 GVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLV--DMN 264
Query: 222 PQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQ-ARSLRRNLT 280
G + + S D + L L
Sbjct: 265 DGGAVTLTALGEDMPDTLKGFRAPNPILTPSYPVLNGRVGAPTGDMADHAPVGLLVTIL- 323
Query: 281 ASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKI 340
P PN +H + INGK
Sbjct: 324 -VEPGPNRDTDFHLIGGIGGYV-------WAINGKA------------------------ 351
Query: 341 PGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMD 400
F + G V N +H+ GH FF V +
Sbjct: 352 ---FDDNRVTLIAKAGTRE--------------RWVLTNDTPMPHPFHLHGH-FFQV-LS 392
Query: 401 GGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
G P + +D TV V P V D G W
Sbjct: 393 GDAPAPGAA--PGWKD-----TVLVAPGERLLVRFDADYPGPW 428
|
Length = 451 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 7e-09
Identities = 52/216 (24%), Positives = 78/216 (36%), Gaps = 50/216 (23%)
Query: 48 DGVYGTNCP-IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPF 106
DGV G + I PG+ FTY V+ Q G+Y+Y F + AG YG + I PV
Sbjct: 112 DGVPGVSFAGIAPGETFTYRFPVR-QSGTYWYHSHSGFQEQAGLYGPLIIDPAEPDPVRA 170
Query: 107 DPPAGDFTILAGDW---------------------YKKNHTD-LKAILDSGSDLPFPD-- 142
D + +L DW YK+ D + + + G D
Sbjct: 171 DR---EHVVLLSDWTDLDPAALFRKLKVMAGHDNYYKRTVADFFRDVRNDGLKQTLADRK 227
Query: 143 --------------------GLVINGRGSNAN-TFTVDQGKTYRFRISNVGISTSINFRI 181
++NG N T G+ R R N T + RI
Sbjct: 228 MWGQMRMTPTDLADVNGSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSAMTYFDVRI 287
Query: 182 QGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVR 217
G K+ +V V+G + + D I +++ V+V
Sbjct: 288 PGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVE 323
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 491 | |||
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.97 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 99.96 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.94 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.65 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.62 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.31 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 99.05 | |
| PLN02604 | 566 | oxidoreductase | 99.0 | |
| PLN02835 | 539 | oxidoreductase | 98.95 | |
| PLN02792 | 536 | oxidoreductase | 98.89 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 98.87 | |
| PLN02991 | 543 | oxidoreductase | 98.87 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 98.84 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 98.83 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 98.75 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 98.72 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 98.68 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 98.64 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.61 | |
| PLN02191 | 574 | L-ascorbate oxidase | 98.6 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 98.59 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 98.38 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 98.37 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 98.19 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 98.17 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 98.08 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.92 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.77 | |
| PRK02710 | 119 | plastocyanin; Provisional | 97.57 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.49 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.48 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 97.37 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 97.25 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.19 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.98 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 96.89 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 96.73 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 96.72 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.47 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 96.35 | |
| PRK02710 | 119 | plastocyanin; Provisional | 96.31 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 95.99 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 95.67 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 95.38 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 94.9 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 94.22 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 93.88 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 93.01 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 92.6 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 91.55 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 90.6 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 90.29 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 90.07 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 88.78 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 83.76 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 83.73 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 80.93 |
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-104 Score=833.81 Aligned_cols=484 Identities=61% Similarity=1.034 Sum_probs=391.8
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|..++..+||+|++. |+|+|+|+|+|+++|+|||||++|.+++||||++++||||+||++|+|+|++++|+|||||||
T Consensus 51 ~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ttiHWHGl~~~~~~~~DGv~~tQ~pI~PG~sf~Y~F~~~~q~GT~WYHs 130 (539)
T PLN02835 51 ILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFP 130 (539)
T ss_pred EEECCcCCCCCEEEECCCEEEEEEEeCCCCCCcEEeCCcccCCCCCCCCCccCcCCCCCCCcEEEEEEECCCCEeEEEEe
Confidence 345678889999874 889999999999999999999999999999999999999999999999999877899999999
Q ss_pred CccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCCcceEEEeC
Q 011178 81 SLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQ 160 (491)
Q Consensus 81 H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~~~~~~v~~ 160 (491)
|.+.|+++||+|+|||++++..+.+|+.+|+|++|+|+||++++...+...+..+...+++|.+||||+. .+.++|++
T Consensus 131 H~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~g~~~~~~d~~liNG~~--~~~~~v~~ 208 (539)
T PLN02835 131 STLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLDSGKVLPFPDGVLINGQT--QSTFSGDQ 208 (539)
T ss_pred CccchhcCcccceeEEeCCCCCCcCCCCCCceEEEEeeccccCCHHHHHHHhhcCCCCCCCceEEEcccc--CceEEECC
Confidence 9999999999999999876555556667899999999999999877666556666667789999999999 78999999
Q ss_pred CCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcce
Q 011178 161 GKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA 240 (491)
Q Consensus 161 g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~ 240 (491)
|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..++.|.|++||||||+|++++++|+|||++...+.......
T Consensus 209 G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i~a~~~~~~~~~~~ 288 (539)
T PLN02835 209 GKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTA 288 (539)
T ss_pred CCEEEEEEEEcCCCccEEEEECCCEEEEEEECCccCCCceeeEEEECcCceEEEEEEcCCCCCcEEEEEEccccCCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999888999999875443334568
Q ss_pred EEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEeEEE
Q 011178 241 TSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAV 320 (491)
Q Consensus 241 ~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i 320 (491)
.|+|+|.++..+.+.++|..|..+..+....+....+.+.+....+.+..+........++++.+.......++...|++
T Consensus 289 ~ail~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~i 368 (539)
T PLN02835 289 TAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAV 368 (539)
T ss_pred EEEEEECCCCCCCCCCCCCCCccccccccchhhccccccCccccCCCCCccccccccCCCceEEEeccccccCCeEEEEE
Confidence 89999988653333334433321111122222222233433333333332221212233555544332222345689999
Q ss_pred cCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeec
Q 011178 321 NSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMD 400 (491)
Q Consensus 321 Ng~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g 400 (491)
||.+|..|.+|++.+.+.+.++.|+.+.....+.+...+.++.++.++.|++|||+|+|.+...||||||||+||||++|
T Consensus 369 N~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~Veivi~N~~~~~HP~HLHGh~F~Vlg~G 448 (539)
T PLN02835 369 NGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYG 448 (539)
T ss_pred CCcccCCCCCChhhhhhhcCCCccccCccccCCCCCccccCCeEEEcCCCCEEEEEEECCCCCCCCCCCCCccEEEEecc
Confidence 99999988999987777666677765433333333334556788899999999999999988899999999999999999
Q ss_pred cCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcc
Q 011178 401 GGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNA 480 (491)
Q Consensus 401 ~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~ 480 (491)
.|.|++.....+|+.||++|||+.|+++||++|||+|||||.|+|||||++|+..||+++|+|.++.+...+.+++|+++
T Consensus 449 ~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aDNPG~Wl~HCHi~~H~~~Gm~~~~~V~~~~~~~~~~~~~P~~~ 528 (539)
T PLN02835 449 SGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNA 528 (539)
T ss_pred CCCCCcccccccCCCCCCccceEEeCCCCEEEEEEECcCCEEeeeeecchhhhhcccEEEEEEccCCCccccccCCCccc
Confidence 99998665556889999999999999999999999999999999999999999999999999998765555567899999
Q ss_pred hhcccccC
Q 011178 481 LLCGRAVG 488 (491)
Q Consensus 481 ~~c~~~~~ 488 (491)
++||.-++
T Consensus 529 ~~Cg~~~~ 536 (539)
T PLN02835 529 LLCGKAIG 536 (539)
T ss_pred cccccCcc
Confidence 99997766
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-103 Score=821.15 Aligned_cols=484 Identities=65% Similarity=1.142 Sum_probs=392.8
Q ss_pred CcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCc
Q 011178 5 NHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 82 (491)
Q Consensus 5 ~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 82 (491)
.++..+||+|++. |+|+|+|+|+|+++|+|||||++|.+++||||++++||||+||++|+|+|++++|+||||||||.
T Consensus 52 vNG~~PGP~I~~~~GD~v~V~V~N~L~~~ttiHWHGi~q~~~~~~DGv~~tQcpI~PG~sftY~F~~~~q~GT~WYHsH~ 131 (543)
T PLN02991 52 INGKFPGPDIISVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSL 131 (543)
T ss_pred EcCCCCCCcEEEECCCEEEEEecCCCCCCccEEECCcccCCCccccCCCCCCCccCCCCcEEEEEEeCCCCcceEEecCc
Confidence 3567788888774 78888899999999999999999999999999988999999999999999997789999999999
Q ss_pred cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCCcceEEEeCCC
Q 011178 83 AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGK 162 (491)
Q Consensus 83 ~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~~~~~~v~~g~ 162 (491)
+.|+++||+|+|||++++.++.+++.+++|++|+|+||++++...+...+..+...+++|.+||||+.. .++++|++|+
T Consensus 132 ~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~d~~i~l~DW~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~-~~~~~v~~G~ 210 (543)
T PLN02991 132 GFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDNGGKLPLPDGILINGRGS-GATLNIEPGK 210 (543)
T ss_pred chhhhCCCeeeEEEeCCcccCcccccccceeEEEecceecCCHHHHHHHhhcCCCCCCCCEEEEccCCC-CceEEECCCC
Confidence 999999999999999986666677667899999999999998766655555555667899999999973 5789999999
Q ss_pred EEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcceEE
Q 011178 163 TYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATS 242 (491)
Q Consensus 163 ~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~a 242 (491)
+|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|+++|++|+|||++...+........|
T Consensus 211 ~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~~~p~~~~~l~i~~GQRydvlv~a~~~~~~y~i~~~~~~~~~~~~~~A 290 (543)
T PLN02991 211 TYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILITTG 290 (543)
T ss_pred EEEEEEEeccCCeeEEEEECCCEEEEEEeCCccccceeeeEEEEcCCcEEEEEEECCCCCCcEEEEEeeccCCCCcceEE
Confidence 99999999999999999999999999999999999999999999999999999999998999999998755444457899
Q ss_pred EEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcC
Q 011178 243 VLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNS 322 (491)
Q Consensus 243 il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg 322 (491)
||+|+++..+.+.+.|..|. ...++.+.+......|.+....+.|..+..+.....++++.+.......++...|+||+
T Consensus 291 Il~Y~g~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~ 369 (543)
T PLN02991 291 VLHYSNSAGPVSGPIPDGPI-QLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNS 369 (543)
T ss_pred EEEeCCCCCCCCCCCCCCCc-cccccccchhhhhhcccCCCCCCCCCccccccccccceeEEEeecccccCceEEEEECC
Confidence 99999875322223333332 22232222222333444433334444322222223344444432111124567999999
Q ss_pred eeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccC
Q 011178 323 VSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGG 402 (491)
Q Consensus 323 ~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g 402 (491)
.+|..|++|+|.+.+.+.+|.|+.+.....|.++.......++.++.|++|||+|+|.....||||||||+||||++|.|
T Consensus 370 ~s~~~p~~p~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G 449 (543)
T PLN02991 370 ASFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELG 449 (543)
T ss_pred CccCCCCCChhhhhhhcccCccccccccccCCCCccccCCcEEEcCCCCEEEEEEeCCCCCCCCeeeCCcceEEEEeCCC
Confidence 99999999998877776778776543333333333344567888999999999999998889999999999999999999
Q ss_pred CCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcchh
Q 011178 403 EWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALL 482 (491)
Q Consensus 403 ~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~ 482 (491)
.|++.+...||+.||++|||+.|+++||++|||+|||||+|+|||||..|+..||++++.|.++.+....++++|++.++
T Consensus 450 ~f~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~W~~HCHi~~h~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~ 529 (543)
T PLN02991 450 KWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALL 529 (543)
T ss_pred CCCcccccccCCCCCCcccEEEECCCCEEEEEEECCCCEEeeeeeCccccccccEEEEEEecCCCCccccccCCCcccCc
Confidence 99877666799999999999999999999999999999999999999999999999999998777766667889999999
Q ss_pred cccccCCC
Q 011178 483 CGRAVGHR 490 (491)
Q Consensus 483 c~~~~~~~ 490 (491)
||.-++.+
T Consensus 530 Cg~~~~~~ 537 (543)
T PLN02991 530 CGRATGHH 537 (543)
T ss_pred cccCCCCC
Confidence 98777654
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-102 Score=813.72 Aligned_cols=483 Identities=61% Similarity=1.037 Sum_probs=390.4
Q ss_pred CcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCc
Q 011178 5 NHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 82 (491)
Q Consensus 5 ~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 82 (491)
.++..+||+|++. |+|+|+|+|+|+++++|||||++|++++||||++++||||+||++|+|+|++++|+||||||||.
T Consensus 40 vNGq~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~q~~~~~~DGv~~tqcPI~PG~sftY~F~~~~q~GT~WYHsH~ 119 (536)
T PLN02792 40 INGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDGVYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSL 119 (536)
T ss_pred ECCCCCCCcEEEECCCEEEEEEEeCCCCCcCEeCCCcccCCCCccCCCCCCcCccCCCCcEEEEEEeCCCccceEEecCc
Confidence 4567788888874 78899999999999999999999999999999988999999999999999997789999999999
Q ss_pred cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCC-CCceEEEcCcCC-CcceEEEeC
Q 011178 83 AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLP-FPDGLVINGRGS-NANTFTVDQ 160 (491)
Q Consensus 83 ~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~-~~~~~~vNG~~~-~~~~~~v~~ 160 (491)
+.|+++||+|+|||++++..+.+|+.+++|++|+|+||++++...+...+..+...+ ++|.+||||++. ..++++|++
T Consensus 120 ~~q~~~Gl~G~liI~~~~~~~~p~~~~d~e~~i~l~Dw~~~~~~~~~~~~~~g~~~~~~~d~~liNG~~~~~~~~~~v~~ 199 (536)
T PLN02792 120 AVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGVSYVYSITVDK 199 (536)
T ss_pred chhhhcccccceEEeCCcccCcCCCcccceeEEEecccccCCHHHHHHHhhccCcCCCCCCEEEEeccCCCCcceEEECC
Confidence 999999999999999866555667677899999999999998776655555554433 889999999963 247899999
Q ss_pred CCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcce
Q 011178 161 GKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA 240 (491)
Q Consensus 161 g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~ 240 (491)
|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++++|+|||++...+......+
T Consensus 200 Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v~p~~~~~l~i~~GqRydVlV~a~~~~g~Y~i~a~~~~~~~~~~~ 279 (536)
T PLN02792 200 GKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTMDQPPQNYSIVVSTRFIAAKVLV 279 (536)
T ss_pred CCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccCCCcceeEEEEccCceEEEEEEcCCCCceEEEEEEeccCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999888999999987554344678
Q ss_pred EEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEeEE
Q 011178 241 TSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYA 319 (491)
Q Consensus 241 ~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (491)
.|||+|.++..... ..|..|. .+..++.+....++..+.+..+.+.|+++..+.....++++.+.......++...|+
T Consensus 280 ~ail~Y~g~~~~~~-~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (536)
T PLN02792 280 SSTLHYSNSKGHKI-IHARQPDPDDLEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYA 358 (536)
T ss_pred EEEEEECCCCCCCC-CCCCCCCcCCccccccchhhhhhccCCCCCCCCCCcccccceeccceeEEecccccccCceeEEE
Confidence 89999987643211 1122221 233333333333344444333344554433332233445554443222233567899
Q ss_pred EcCeeeeCCCCccccccccCCCCccccCCCCCCCC-CCCcceeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEe
Q 011178 320 VNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPT-GGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVG 398 (491)
Q Consensus 320 iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~ 398 (491)
|||.+|..|++|+|.+.++++.|.++.+.....|. .+....++.++.++.|++|||+|+|.....||||||||+||||+
T Consensus 359 iN~~s~~~p~~p~L~a~~~~~~g~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg 438 (536)
T PLN02792 359 INGVSFVPSDTPLKLADHFKIKGVFKVGSIPDKPRRGGGMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVG 438 (536)
T ss_pred ECCcccCCCCCchhhhhhhccCCCcCcccCccCCcccCCCccCceEEEcCCCCEEEEEEECCCCCCCCeeeCCCceEEEe
Confidence 99999999999999887766677775442222222 22233457788999999999999998878899999999999999
Q ss_pred eccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCC
Q 011178 399 MDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPS 478 (491)
Q Consensus 399 ~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~ 478 (491)
+|.|.|++.....||+.||++|||+.|+++||++|||+|||||+|+||||+..|+..||+++|.|.++.+....++++|+
T Consensus 439 ~G~G~~~~~~~~~~Nl~nP~~RdTv~v~~~gw~aIRf~aDNPGvW~~HCh~~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~ 518 (536)
T PLN02792 439 INKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPK 518 (536)
T ss_pred ecCCCCCcccccccCcCCCCccceEEECCCCEEEEEEEeeCCEEEeeeEcchhccccceEEEEEEccCCCccccccCCCc
Confidence 99999988777789999999999999999999999999999999999999999999999999999877665556788999
Q ss_pred cchhcccccC
Q 011178 479 NALLCGRAVG 488 (491)
Q Consensus 479 ~~~~c~~~~~ 488 (491)
+.++||..++
T Consensus 519 ~~~~Cg~~~~ 528 (536)
T PLN02792 519 NALLCGRASN 528 (536)
T ss_pred ccCccccccC
Confidence 9999987655
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-102 Score=816.67 Aligned_cols=483 Identities=55% Similarity=0.965 Sum_probs=385.6
Q ss_pred CcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCc
Q 011178 5 NHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 82 (491)
Q Consensus 5 ~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 82 (491)
.++..+||+|++ ||+|+|+|+|+|+++|+|||||++|.+++||||+++|||||+||++|+|+|++.+|+||||||||.
T Consensus 51 iNGq~PGP~I~~~~GD~v~V~v~N~l~~~ttiHWHGi~q~~~~~~DGv~~TQcpI~PG~sf~Y~F~~~~q~GT~WYHsH~ 130 (552)
T PLN02354 51 INGQFPGPNINSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKDQIGSYFYYPST 130 (552)
T ss_pred ECCCCcCCcEEEeCCCEEEEEEEECCCCCcccccccccCCCCcccCCCcCCcCCCCCCCcEEEEEEeCCCCcceEEecCc
Confidence 466778888887 478899999999999999999999999999999999999999999999999987789999999999
Q ss_pred cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC-----CcceEE
Q 011178 83 AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS-----NANTFT 157 (491)
Q Consensus 83 ~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~-----~~~~~~ 157 (491)
+.|+++||+|+|||++++..+.+|+.+++|++|+|+||++++...+...+..+.....++++||||+.. ..+.++
T Consensus 131 ~~Q~~~Gl~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~ 210 (552)
T PLN02354 131 GMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTALKKFLDSGRTLGRPDGVLINGKSGKGDGKDEPLFT 210 (552)
T ss_pred cceecCCccceEEEcCCcCCCCCCCCcCceEEEEeeeeccCCHHHHHHHHhcCCCCCCCCeEEEeCCcCCCCCCCceEEE
Confidence 999999999999999987666777777899999999999998777766666665566789999999962 247899
Q ss_pred EeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCC
Q 011178 158 VDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQV 237 (491)
Q Consensus 158 v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~ 237 (491)
|++||+|||||||+|....+.|+|+||+|+|||+||.+++|..++.|.|++||||||+|++++++|+|||++...+....
T Consensus 211 v~~Gk~yRlRiINa~~~~~~~f~IdgH~~tVIa~DG~~v~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~i~a~~~~~~~~ 290 (552)
T PLN02354 211 MKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVASTRFLKKV 290 (552)
T ss_pred ECCCCEEEEEEEecCCCceEEEEECCceEEEEEeCCcccCCcceeEEEEccCceEEEEEECCCCCCcEEEEEeccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999886544444
Q ss_pred cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEe
Q 011178 238 LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQR 317 (491)
Q Consensus 238 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (491)
....|+|+|.++..+.+...|..|. ...++.+.+..+..++.+....+.+.....+.....++++.+.......++...
T Consensus 291 ~~~~ail~Y~g~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 369 (552)
T PLN02354 291 LTTTGIIRYEGGKGPASPELPEAPV-GWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDGKLR 369 (552)
T ss_pred ccEEEEEEECCCCCCCCCCCCCCCc-ccccchhhhhhhhhcccccccCCCCCCccccccccccceEEEecccccCCceEE
Confidence 6788999998865332222332221 111223233333333443333333322211112234455555432212345678
Q ss_pred EEEcCeeeeCCCCccccccccCC-CCccccCC-CCCCCC-CCCcceeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCe
Q 011178 318 YAVNSVSFIPADTPLKLADYFKI-PGVFSVGS-IPDNPT-GGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNF 394 (491)
Q Consensus 318 ~~iNg~~f~~~~~p~~~~~~~~~-~~~~~~~~-~~~~p~-~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F 394 (491)
|+|||.+|..|++|+|.+.+.++ .|.++.+. ....|. ......+..++.++.|++|||+|+|.+...||||||||+|
T Consensus 370 ~~iNn~s~~~p~~P~L~~~~~~~~~g~~~~~~~~~~pp~~~~~~~~~~~v~~~~~~~~VeiVi~n~~~~~HP~HLHGh~F 449 (552)
T PLN02354 370 YALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNPPAKITKIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSF 449 (552)
T ss_pred EEECCccCCCCCCChHHhhhhcccCCccccCccccCCccccCccccCCeeEEcCCCCEEEEEEeCCCCCCCCCcCCCccE
Confidence 99999999999999987765433 25444221 111111 1123345678899999999999999988899999999999
Q ss_pred EEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCC
Q 011178 395 FAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEY 474 (491)
Q Consensus 395 ~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~ 474 (491)
|||++|.|.|+++....+|+.||++|||+.|+++||++|||+|||||+|+|||||..|++.||.+.+.|.++.+.++++.
T Consensus 450 ~Vlg~G~G~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~~~~~~~~ 529 (552)
T PLN02354 450 FAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEY 529 (552)
T ss_pred EEEeecCCCCCccccccCCcCCCCccceEEeCCCCeEEEEEEecCCeEEeeeccccccccccceEEEEEeCCccccCcCC
Confidence 99999999998766667999999999999999999999999999999999999999999999999999998766666667
Q ss_pred CCCCcchhcccccC
Q 011178 475 PIPSNALLCGRAVG 488 (491)
Q Consensus 475 ~~p~~~~~c~~~~~ 488 (491)
++|++.+.|+..++
T Consensus 530 ~~P~~~~~C~~~~~ 543 (552)
T PLN02354 530 NMPENALLCGKVKG 543 (552)
T ss_pred CCCccccccccccC
Confidence 89999999998775
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-101 Score=806.58 Aligned_cols=482 Identities=50% Similarity=0.838 Sum_probs=375.7
Q ss_pred CcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCc
Q 011178 5 NHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 82 (491)
Q Consensus 5 ~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 82 (491)
.++..+||+|++. |+|+|+|+|+|+++|+|||||++|++++||||+++|||||+||++|+|+|++++|+||||||||.
T Consensus 50 vNG~~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~~~~~~~~DGv~gtQcpI~PG~sftY~F~~~~q~GT~WYHsH~ 129 (545)
T PLN02168 50 INDMFPGPLLNATANDVINVNIFNNLTEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPSL 129 (545)
T ss_pred ECCcCCCCcEEEECCCEEEEEEEeCCCCCccEeeCCccCCCCCCcCCCCCCcCCCCCCCcEEEEEEeCCCCceEEEecCh
Confidence 4677888888874 78899999999999999999999999999999999999999999999999997689999999999
Q ss_pred cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCCcceEEEeCCC
Q 011178 83 AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGK 162 (491)
Q Consensus 83 ~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~~~~~~v~~g~ 162 (491)
+.|+++||+|+|||++++..+.+++.+++|++|+|+||++.+...+...+..+...+++|.+||||++...++++|++|+
T Consensus 130 ~~Q~~~GL~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~v~~G~ 209 (545)
T PLN02168 130 LLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDNGHSLPNPDGILFNGRGPEETFFAFEPGK 209 (545)
T ss_pred hhhhhCcceeEEEEcCCcccCcCcCcccceeeEEEEecCCCCHHHHHhhhhcCCCCCCCCEEEEeccCCCcceEEeCCCC
Confidence 99999999999999998766666667789999999999998765554444444445678999999997446899999999
Q ss_pred EEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCC-c---ceEEEEEeeccCCCc
Q 011178 163 TYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPP-Q---GYYIVISTRFTSQVL 238 (491)
Q Consensus 163 ~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~-g---~~~i~~~~~~~~~~~ 238 (491)
+|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++.+ | +|||++.........
T Consensus 210 ~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~v~p~~~~~l~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~~~~ 289 (545)
T PLN02168 210 TYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDAYL 289 (545)
T ss_pred EEEEEEEeccCCceEEEEECCcEEEEEEECCeECCCceeeEEEEcCCceEEEEEEcCCCCCCCcceEEEEEEecccCCCc
Confidence 999999999999999999999999999999999999999999999999999999998644 4 799999876544556
Q ss_pred ceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEe
Q 011178 239 SATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQR 317 (491)
Q Consensus 239 ~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 317 (491)
.+.|+|+|.++......++|..|. .+...+.+....+...+.+..+.+.|.++..+.....++++.+.......++...
T Consensus 290 ~~~ail~Y~~~~~~~~~p~p~~p~~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 369 (545)
T PLN02168 290 GGVALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLR 369 (545)
T ss_pred ceEEEEEECCCCCCCCCCCCCCCcccccccccchhhhhhhcCCCCCCCCCCcccccccccccceeEEecccccccCceEE
Confidence 788999998764322223333232 1121111211222223333222333332222222234455544331111245688
Q ss_pred EEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEE
Q 011178 318 YAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAV 397 (491)
Q Consensus 318 ~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl 397 (491)
|+|||.+|..|++|++.+.++++.+.+..+.....|.+.....++.++.++.|++|||+|+|.....||||||||+||||
T Consensus 370 ~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vv 449 (545)
T PLN02168 370 YTINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNFFVV 449 (545)
T ss_pred EEECCCccCCCCCchhhhhhcccccccccCCCccCCCcCccccCceEEEecCCCEEEEEEeCCCCCCCCeeeCCCceEEE
Confidence 99999999999999887665544444332211112221112224678899999999999999987889999999999999
Q ss_pred eeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEe-----cCCcc-Cc
Q 011178 398 GMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVY-----SSANS-WR 471 (491)
Q Consensus 398 ~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~-----~~~~~-~~ 471 (491)
++|.|.|++.....+|+.||++|||+.|+++||++|||+|||||.|+|||||..|++.||++.++|. .|++. ..
T Consensus 450 g~g~g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~Wl~HCHi~~~~h~g~gl~~~v~~~~~e~p~~~~~~ 529 (545)
T PLN02168 450 GYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVR 529 (545)
T ss_pred ECCCCCCCccccccCCCCCCCccceEEeCCCCEEEEEEEccCCeEEeeeecCcccceecCcEEEEEEcccccCccccccc
Confidence 9999999977666799999999999999999999999999999999999999999999999999884 23332 23
Q ss_pred cCCCCCCcchhcccc
Q 011178 472 DEYPIPSNALLCGRA 486 (491)
Q Consensus 472 ~~~~~p~~~~~c~~~ 486 (491)
.++++|+++++||..
T Consensus 530 ~~~~~P~~~~~cg~~ 544 (545)
T PLN02168 530 DENPIPGNVIRCGKV 544 (545)
T ss_pred cccCCChhhcccccC
Confidence 356799999999843
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-101 Score=805.48 Aligned_cols=483 Identities=49% Similarity=0.838 Sum_probs=385.2
Q ss_pred CcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCc
Q 011178 5 NHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 82 (491)
Q Consensus 5 ~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 82 (491)
.++..+||+|++. |+|+|+|+|+|+++|+|||||++|++++|+||+++|||||+||++|+|+|++++|+||||||||.
T Consensus 53 vNGq~PGPtI~~~~GD~v~V~V~N~L~~~ttIHWHGl~q~~t~w~DGv~~TQcPI~PG~sftY~F~~~dq~GT~WYHsH~ 132 (596)
T PLN00044 53 INGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVGSFFYAPST 132 (596)
T ss_pred EcCcCCCCcEEEECCCEEEEEEEeCCCCCccEEECCccCCCCccccCCCCCcCCcCCCCcEEEEEEeCCCCceeEeeccc
Confidence 4567788888874 78899999999999999999999999999999988999999999999999998799999999999
Q ss_pred cccccCCceeEEEEecCCCCCCCCCCC-CCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC---------
Q 011178 83 AFHKAAGGYGGIKIASRPLIPVPFDPP-AGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN--------- 152 (491)
Q Consensus 83 ~~q~~~Gl~G~liV~~~~~~~~~~~~~-~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~--------- 152 (491)
+.|+++||+|+|||++++..+.||... ++|++|+|+||++++..++...+..+.....++.++|||++..
T Consensus 133 ~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~DW~~~~~~~~~~~l~~g~~~~~~d~~lING~g~~~~n~~~~~~ 212 (596)
T PLN00044 133 ALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRALDAGDLLGAPDGVLINAFGPYQYNDSLVPP 212 (596)
T ss_pred hhhhhCcCeeEEEEcCcccccccccCCcccceEEEecccccCCHHHHHHHHhcCCCCCCCCceEEcccCccccCCccccC
Confidence 999999999999999987666666543 4799999999999987766655665555567899999998641
Q ss_pred ---cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCc-ceEEE
Q 011178 153 ---ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQ-GYYIV 228 (491)
Q Consensus 153 ---~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g-~~~i~ 228 (491)
.+.++|++|++|||||||++..+.+.|+|+||+|+|||+||.+++|..++.|.|++||||||+|+++|+++ +|||+
T Consensus 213 ~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVIa~DG~~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~ 292 (596)
T PLN00044 213 GITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVV 292 (596)
T ss_pred CCccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEEEeCCcccCceeeeeEEEcCCceEEEEEECCCCCCCceEEE
Confidence 24799999999999999999999999999999999999999999999999999999999999999998765 89999
Q ss_pred EEeecc----CCCcceEEEEEecCCCCCCCCCCCCCC--CccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceE
Q 011178 229 ISTRFT----SQVLSATSVLHYSNSAGSVSGPPPGGP--TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHT 302 (491)
Q Consensus 229 ~~~~~~----~~~~~~~ail~y~~~~~~~~~~~p~~p--~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 302 (491)
+...+. .+...+.|||+|.++....+.+.|..| ..+..++.+....+.+.+......+.|+++..+......+.
T Consensus 293 a~~~~~~~~~~~~~~~~AIl~Y~~~~~~~~~~~P~~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 372 (596)
T PLN00044 293 ASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDV 372 (596)
T ss_pred EecccccCccccCcceeEEEEECCCCCCCCCCCCCCCcccCCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeee
Confidence 875321 144678899999876532222234333 12333333333444433333223344443222211222222
Q ss_pred EEEecccc-CcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC
Q 011178 303 IRLQNTAP-TINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381 (491)
Q Consensus 303 ~~l~~~~~-~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~ 381 (491)
+.+..... ..++...|+|||.+|..|+.|++.+.++++.++|+.+.....|. ......+.++.+++|++|||+|+|..
T Consensus 373 ~~~~~~~~~~~~g~~~~s~Nnvsf~~p~~p~L~a~~~~~~gv~~~~fp~~pp~-~~~~~~t~v~~~~~n~~VeiV~qn~~ 451 (596)
T PLN00044 373 YLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVPGVFKLDFPNHPMN-RLPKLDTSIINGTYKGFMEIIFQNNA 451 (596)
T ss_pred eeeccccccccCCeEEEEECcccCCCCCCcchhhhhccCCCcccCCCCCCCCc-cccccCceEEEcCCCCEEEEEEeCCC
Confidence 22211000 11246899999999999999999888877788887654433332 22334677889999999999999987
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEE
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYL 461 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~ 461 (491)
...||||||||+|+||++|.|.|++++...||+.||++|||+.|+++||++|||++||||+|+|||||+.|++.||++.|
T Consensus 452 ~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~nPp~RdTv~vp~~gW~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~ 531 (596)
T PLN00044 452 TNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYI 531 (596)
T ss_pred CCCCCeeEcCccEEEEeecCCCCCCCcccccccCCCCccceEEeCCCCeEEEEEecCCCEEehhhccCchhhcccCcEEE
Confidence 77899999999999999999999987777899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcc-CccCCCCCCcchhcccccC
Q 011178 462 RVYSSANS-WRDEYPIPSNALLCGRAVG 488 (491)
Q Consensus 462 ~V~~~~~~-~~~~~~~p~~~~~c~~~~~ 488 (491)
.|.++.+. ...++++|+++++||.-++
T Consensus 532 ~v~~~~~~~~~~~~~pP~~~~~Cg~~~~ 559 (596)
T PLN00044 532 NVVNPEDNSNKTVLPIPDNAIFCGALSS 559 (596)
T ss_pred EEecCCCCccccccCCCcccCccccccc
Confidence 99876643 4457889999999987655
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-96 Score=761.33 Aligned_cols=483 Identities=45% Similarity=0.712 Sum_probs=413.7
Q ss_pred ccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccc
Q 011178 7 FSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAF 84 (491)
Q Consensus 7 ~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 84 (491)
+.-|||+|++ ||+|.|+|.|+++++++|||||++|..++|+||+.+|||||+||++|+|+|++++|.||||||+|.+.
T Consensus 54 G~fPGP~I~~~~gD~ivV~v~N~~~~~~sihWhGv~q~kn~w~DG~~~TqCPI~Pg~~~tY~F~v~~q~GT~~yh~h~~~ 133 (563)
T KOG1263|consen 54 GQFPGPTINAEEGDTIVVNVVNRLDEPFSIHWHGVRQRKNPWQDGVYITQCPIQPGENFTYRFTVKDQIGTLWYHSHVSW 133 (563)
T ss_pred CCCCCCeEEEEeCCEEEEEEEeCCCCceEEEeccccccCCccccCCccccCCcCCCCeEEEEEEeCCcceeEEEeecccc
Confidence 3345555544 35557779999999999999999999999999944599999999999999999889999999999999
Q ss_pred cccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccC-CHHHHHHHHhcCCCCCC-CceEEEcCcCCCc----ceEEE
Q 011178 85 HKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKK-NHTDLKAILDSGSDLPF-PDGLVINGRGSNA----NTFTV 158 (491)
Q Consensus 85 q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~-~~~~~~~~~~~~~~~~~-~~~~~vNG~~~~~----~~~~v 158 (491)
|+++|++|+|||++++..+.||+.+|+|++|+|+||+.+ +...+...+..+...+. +|.++|||+.... ++++|
T Consensus 134 ~Ra~G~~G~liI~~~~~~p~pf~~pd~E~~ill~dW~~~~~~~~l~~~~~~~~~~p~~~D~~~iNg~~g~~~~~~~~l~v 213 (563)
T KOG1263|consen 134 QRATGVFGALIINPRPGLPVPFPKPDKEFTILLGDWYKNLNHKNLKNFLDRTGALPNPSDGVLINGRSGFLYNCTPTLTV 213 (563)
T ss_pred ccccCceeEEEEcCCccCCCCCCCCCceeEEEeEeeccccCHHHHHHhhccCCCCCCCCCceEECCCCCcccCceeEEEE
Confidence 999999999999999887888888999999999999996 77777776666555444 8999999997422 68999
Q ss_pred eCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCC--
Q 011178 159 DQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQ-- 236 (491)
Q Consensus 159 ~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~-- 236 (491)
++||+|||||+|+|....+.|+|++|+|+||++||.+++|..+++|.|.||||+||+|+++|.+++|+|.+...+...
T Consensus 214 ~pGktY~lRiiN~g~~~~l~F~I~~H~ltvVe~Dg~y~~p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~~~~~~~~ 293 (563)
T KOG1263|consen 214 EPGKTYRLRIINAGLNTSLNFSIANHQLTVVEVDGAYTKPFTTDSLDIHPGQTYSVLLTADQSPGDYYIAASPYFDASNV 293 (563)
T ss_pred cCCCEEEEEEEccccccceEEEECCeEEEEEEecceEEeeeeeceEEEcCCcEEEEEEeCCCCCCcEEEEEEeeeccCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999877654
Q ss_pred --CcceEEEEEecCCCCCCCCCCC----CCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEecccc
Q 011178 237 --VLSATSVLHYSNSAGSVSGPPP----GGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAP 310 (491)
Q Consensus 237 --~~~~~ail~y~~~~~~~~~~~p----~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~ 310 (491)
.....++|+|.++..+.+...+ ..|..+..++....+.+++.+....+.++|++++.+......+.+.+.....
T Consensus 294 ~~~~t~~~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~ 373 (563)
T KOG1263|consen 294 PFNLTTTGILRYSGSTHPASEKLPIYPFLPPGNDTAWSTYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDN 373 (563)
T ss_pred ceeeeEEEEEEEeCCcccCcccCcccccCCcccCchhhhhhhhcccccccccCcccCCCccccccceeeeccEEeccCCC
Confidence 6788899999985544443322 1232466677888888888888888889999888777667777777766544
Q ss_pred CcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCC--C-CCC-cceeeeEEeecCCcEEEEEEEcCCC---C
Q 011178 311 TINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNP--T-GGG-AYLQTSVMAADFRGFAEVVFENPED---T 383 (491)
Q Consensus 311 ~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p--~-~~~-~~~~~~~~~~~~g~~v~~~i~N~~~---~ 383 (491)
..+++.+++||+.+|..|++|.+++.++...+.+..+...+.| . ... .+.++.++.+++++.||++|+|.+. .
T Consensus 374 ~~~~~~~~siN~isf~~P~tp~~l~~~~~~~~~~~~~d~p~~P~~~~~~~~~~~~t~v~~~~~~~~veIVlqN~~~~~~~ 453 (563)
T KOG1263|consen 374 KNNGKLRASINNISFVTPKTPSLLAAYFKNIPGYFTNDFPDKPPIKFDYTGPTLGTSVMKLEFNSFVEIVLQNTSTGTQE 453 (563)
T ss_pred CCCcEEEEEEcceEEECCCCchhhhhhhccCCccccCccCCCCccccCCccccccceEEEeecCCEEEEEEeCCccccCC
Confidence 4577899999999999999999888876654333334344444 1 212 3788999999999999999999874 4
Q ss_pred CCceeccCCCeEEEeeccCCCCC--CCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEE
Q 011178 384 LQSWHIDGHNFFAVGMDGGEWTP--ASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYL 461 (491)
Q Consensus 384 ~HP~HlHG~~F~Vl~~g~g~~~~--~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~ 461 (491)
.||||||||.||||+.|.|+|++ +....||+.+|+.||||.|+||+|++|||.|||||+|+||||+.+|...||++.|
T Consensus 454 ~hp~HLHG~~F~Vvg~g~G~~~~~~d~~~~yNl~dp~~R~Tv~V~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f 533 (563)
T KOG1263|consen 454 NHPNHLHGYNFYVVGYGFGNWDPAKDPRKKYNLVDPVSRDTVQVPPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVF 533 (563)
T ss_pred CCccceeceEEEEEEecccccCcCcChhhhcccCCCcccceEEeCCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEE
Confidence 59999999999999999999999 5557899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCccCccCCCCCCcchhcccccCC
Q 011178 462 RVYSSANSWRDEYPIPSNALLCGRAVGH 489 (491)
Q Consensus 462 ~V~~~~~~~~~~~~~p~~~~~c~~~~~~ 489 (491)
+|.++++.++.+.++|.+.++||.-++.
T Consensus 534 ~V~~~~~~~~~~~~~P~~~~~cg~~~~~ 561 (563)
T KOG1263|consen 534 IVGNGEESLSSEYPPPKNLPKCGRASGI 561 (563)
T ss_pred EEeCCCccCCcCCCCCCCcccccccCCc
Confidence 9999888877888999999999988764
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-94 Score=758.17 Aligned_cols=472 Identities=26% Similarity=0.418 Sum_probs=356.9
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|..++..+||+|++ ||+|+|+|+|+|+++|+|||||++|.+++|+||+++ |||||+||++|+|+|++.+++||||||
T Consensus 25 ~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~pI~PG~s~~Y~f~~~~~~GT~WYH 104 (539)
T TIGR03389 25 LTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWH 104 (539)
T ss_pred EEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccCCcCCCCeEEEEEEecCCCeeEEEe
Confidence 34577889999987 489999999999999999999999999999999999 999999999999999996689999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHH-HHHhcCCCCCCCceEEEcCcCC-------
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLK-AILDSGSDLPFPDGLVINGRGS------- 151 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~-~~~~~~~~~~~~~~~~vNG~~~------- 151 (491)
||.+.|+ +||+|+|||+++++.+.+++.+|+|++|+|+||++++...+. .....+....++|+++|||+..
T Consensus 105 sH~~~~~-~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~ 183 (539)
T TIGR03389 105 AHISWLR-ATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCSS 183 (539)
T ss_pred cCchhhh-ccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcCCCCCccceEEECCCcCCCCCCCC
Confidence 9998665 599999999997765566667799999999999998766543 3334444456789999999862
Q ss_pred -CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEE
Q 011178 152 -NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIS 230 (491)
Q Consensus 152 -~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~ 230 (491)
..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++++.|++||||||+|++++++|+|||++.
T Consensus 184 ~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~~GqRydVlv~a~~~~g~y~i~~~ 263 (539)
T TIGR03389 184 KDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMAAR 263 (539)
T ss_pred CCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCeEEecCCCEEEEEEECCCCCceEEEEEe
Confidence 1258999999999999999999999999999999999999999999999999999999999999999988899999997
Q ss_pred eeccC----CCcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEE
Q 011178 231 TRFTS----QVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRL 305 (491)
Q Consensus 231 ~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l 305 (491)
...+. ......|+|+|.++........+..|. .+...... ....+........|.. .+ ..+++++.+
T Consensus 264 ~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~-~p---~~~~~~~~~ 335 (539)
T TIGR03389 264 PYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATN----FSNKLRSLNSAQYPAN-VP---VTIDRRLFF 335 (539)
T ss_pred ccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhhH----HHhhcccccccCCCCC-CC---CCCCeEEEE
Confidence 64321 234678999998764321111111111 11100010 0001111110000100 00 022333322
Q ss_pred ecccc----------C-cCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCC-----------CCCCcceeee
Q 011178 306 QNTAP----------T-INGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNP-----------TGGGAYLQTS 363 (491)
Q Consensus 306 ~~~~~----------~-~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p-----------~~~~~~~~~~ 363 (491)
..... . ......|+||+++|..|..|++.+.+.++.+.+..+.....| .+...+.+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 415 (539)
T TIGR03389 336 TIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTK 415 (539)
T ss_pred EeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccccCCccCCCccccCCCCCcccccccccCce
Confidence 21100 0 122468999999999889998765554444433221111111 0111233567
Q ss_pred EEeecCCcEEEEEEEcCC---CCCCceeccCCCeEEEeeccCCCCCCC-CCCcccCCCCceeeEEeCCCCEEEEEEEccC
Q 011178 364 VMAADFRGFAEVVFENPE---DTLQSWHIDGHNFFAVGMDGGEWTPAS-RLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 439 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~-~~~~~~~~p~~rDTv~v~p~~~~~irf~adn 439 (491)
++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|+... ...+|+.||++|||+.|+++||++|||+|||
T Consensus 416 v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~~g~vvirf~adN 495 (539)
T TIGR03389 416 VVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVADN 495 (539)
T ss_pred EEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccccccCCCCeeeeEEcCCCceEEEEEecCC
Confidence 899999999999999985 347999999999999999999887542 2368999999999999999999999999999
Q ss_pred cceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcchhc
Q 011178 440 VGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLC 483 (491)
Q Consensus 440 pG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c 483 (491)
||.|+|||||++|+..||++.|.+..++....+.+++|+++++|
T Consensus 496 PG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c 539 (539)
T TIGR03389 496 PGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539 (539)
T ss_pred CeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence 99999999999999999999998865533334468899999999
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-91 Score=736.57 Aligned_cols=466 Identities=28% Similarity=0.485 Sum_probs=347.2
Q ss_pred CcccCCCCeEEE--eeeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 5 NHFSSLGCSLIT--HLYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 5 ~~~~~~G~~l~v--~d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
.++..+||+||+ ||+|+|+|+|+|+ ++|+|||||++|++++|+||+++ +||||+||++|+|+|++ +++|||||||
T Consensus 47 vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~gvtq~pI~PG~s~~Y~f~~-~~~GT~wYHs 125 (574)
T PLN02191 47 VNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTV-EKPGTHFYHG 125 (574)
T ss_pred ECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCccccCCcCCCCeEEEEEEC-CCCeEEEEee
Confidence 456778888887 4888999999998 78999999999999999999999 99999999999999999 5899999999
Q ss_pred CccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhc--CCCCCCCceEEEcCcCCC------
Q 011178 81 SLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDS--GSDLPFPDGLVINGRGSN------ 152 (491)
Q Consensus 81 H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~~vNG~~~~------ 152 (491)
|.+.|+++||+|+|||+++.+...++ .+|+|++|+|+||++.........+.. .....+++.++|||++..
T Consensus 126 H~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~g~~~~~~~~ 204 (574)
T PLN02191 126 HYGMQRSAGLYGSLIVDVAKGPKERL-RYDGEFNLLLSDWWHESIPSQELGLSSKPMRWIGEAQSILINGRGQFNCSLAA 204 (574)
T ss_pred CcHHHHhCCCEEEEEEccCCCCCCCC-CCCeeEEEeeeccccCChHHHHHhhccCCCCcCCCCCceEECCCCCCCCcccc
Confidence 99999999999999999754332233 469999999999999864432211211 112356789999987631
Q ss_pred -------------------cc-eEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceE
Q 011178 153 -------------------AN-TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212 (491)
Q Consensus 153 -------------------~~-~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~ 212 (491)
.+ +++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||
T Consensus 205 ~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~v~P~~v~~l~i~~GqRy 284 (574)
T PLN02191 205 QFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESY 284 (574)
T ss_pred cccCCcccccceeccCCCCCceEEEEcCCCEEEEEEEecCCceeEEEEECCCeEEEEEcCCeeccceEeeeEEEcCCCeE
Confidence 12 6999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCC-cceEEEEEeeccC-CCcceEEEEEecCCCCCCCC--CCCCCCC-ccccchhhhhhhhccCCCCCCCCCC
Q 011178 213 SVLVRADQPP-QGYYIVISTRFTS-QVLSATSVLHYSNSAGSVSG--PPPGGPT-TQIDWSLEQARSLRRNLTASGPRPN 287 (491)
Q Consensus 213 dv~v~~~~~~-g~~~i~~~~~~~~-~~~~~~ail~y~~~~~~~~~--~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~ 287 (491)
||+|+++|++ ++||||+...... ......|+|+|.+....... +.|..|. .+... .......+......+.
T Consensus 285 dVlV~a~~~~~~~y~ira~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~ 360 (574)
T PLN02191 285 SVLLTTDQDPSQNYYISVGVRGRKPNTTQALTILNYVTAPASKLPSSPPPVTPRWDDFER----SKNFSKKIFSAMGSPS 360 (574)
T ss_pred EEEEECCCCCCCCEEEEEEccccCCCCCCceEEEEECCCCCCCCCCCCCCCCCcccccch----hhcccccccccccCCC
Confidence 9999999876 5899999764321 12345799999875432111 1111111 11110 0111111111000011
Q ss_pred CCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCC---------CCCC-CC
Q 011178 288 PQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD---------NPTG-GG 357 (491)
Q Consensus 288 p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~---------~p~~-~~ 357 (491)
+.. ...++++.+.... ..++..+|.+|+.+|..|..|+|.+.+.+..+.++.+.... .+.. ..
T Consensus 361 ~p~------~~~~~~~~~~~~~-~~~~~~~~~~n~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (574)
T PLN02191 361 PPK------KYRKRLILLNTQN-LIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPPPFPN 433 (574)
T ss_pred CCC------cccceEEEecccc-eeCCeEEEEECcccCcCCCcchHHHHhhccCcccccCCCcccccccccccCCCcccc
Confidence 110 1123444443211 12345689999999998899988776544444433221100 0000 01
Q ss_pred cceeeeEEeecCCcEEEEEEEcCC------CCCCceeccCCCeEEEeeccCCCCCCC-CCCcccCCCCceeeEEeCCCCE
Q 011178 358 AYLQTSVMAADFRGFAEVVFENPE------DTLQSWHIDGHNFFAVGMDGGEWTPAS-RLTYNLRDTISRCTVQVYPKSW 430 (491)
Q Consensus 358 ~~~~~~~~~~~~g~~v~~~i~N~~------~~~HP~HlHG~~F~Vl~~g~g~~~~~~-~~~~~~~~p~~rDTv~v~p~~~ 430 (491)
.+.+..++.++.|++|||+|+|.. ...||||||||+||||++|.|.|+++. ...+|+.||++|||+.|+++||
T Consensus 434 ~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~~nl~nP~rRDTv~vp~~Gw 513 (574)
T PLN02191 434 TTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGW 513 (574)
T ss_pred ccccceeEEecCCCEEEEEEECCCcccCCCCCCCCEEeCCCCeEEEEecCCCCCcccCcccccCCCCCcCCeEEeCCCCE
Confidence 223567889999999999999985 567999999999999999999998632 2468999999999999999999
Q ss_pred EEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcchhcccccC
Q 011178 431 TAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488 (491)
Q Consensus 431 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~ 488 (491)
++|||++||||.|+|||||.+|+..||+++|. +.+++ .+++|++++.|+.+.+
T Consensus 514 ~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~~-e~~~~----~~~~p~~~~~C~~~~~ 566 (574)
T PLN02191 514 TAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFA-EGLNR----IGKIPDEALGCGLTKQ 566 (574)
T ss_pred EEEEEECCCCEEEEEecCchhhhhcCCEEEEe-cChhh----ccCCCcchhhhhcccc
Confidence 99999999999999999999999999999995 33433 2458899999987654
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-91 Score=734.87 Aligned_cols=463 Identities=29% Similarity=0.511 Sum_probs=350.6
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
..++..+||+|++ ||+|+|+|+|+|. ++++|||||++|.+++||||+++ +||+|+||++|+|+|++ +++||||||
T Consensus 24 ~~Ng~~pGP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~vtq~~I~PG~s~~y~f~~-~~~Gt~wyH 102 (541)
T TIGR03388 24 GINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAGVTQCAINPGETFIYNFVV-DRPGTYFYH 102 (541)
T ss_pred EECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCccccCCcCCCCEEEEEEEc-CCCEEEEEE
Confidence 3467788999887 4889999999995 88999999999999999999999 99999999999999999 589999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcC--CCCCCCceEEEcCcCCC-----
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG--SDLPFPDGLVINGRGSN----- 152 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~vNG~~~~----- 152 (491)
||.+.|+++||+|+|||+++..++.++ .+|+|++|+|+||+++...+....+... ....+++.++|||+++.
T Consensus 103 ~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~g~~~~~~~ 181 (541)
T TIGR03388 103 GHYGMQRSAGLYGSLIVDVPDGEKEPF-HYDGEFNLLLSDWWHKSIHEQEVGLSSKPMRWIGEPQSLLINGRGQFNCSLA 181 (541)
T ss_pred ecchHHhhccceEEEEEecCCCCCCCc-cccceEEEEeecccCCCHHHHHhhcccCCCcCCCCCcceEECCCCCCCCccc
Confidence 999999999999999999986544555 4689999999999999765433222211 12246799999998531
Q ss_pred --------------------cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceE
Q 011178 153 --------------------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSY 212 (491)
Q Consensus 153 --------------------~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~ 212 (491)
...++|++|++|||||||+|..+.+.|+|++|+|+|||+||.+++|..++.|.|++||||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~VIa~DG~~v~P~~v~~l~i~~GqR~ 261 (541)
T TIGR03388 182 AKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVEADGNYVEPFTVKDIDIYSGETY 261 (541)
T ss_pred cccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccceEEEEECCCEEEEEEeCCEecccceeCeEEecCCCEE
Confidence 134899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCC-cceEEEEEeecc-CCCcceEEEEEecCCCCCCCC--CCCCCCC-ccccchhhhhhhhccCCCCCCCCCC
Q 011178 213 SVLVRADQPP-QGYYIVISTRFT-SQVLSATSVLHYSNSAGSVSG--PPPGGPT-TQIDWSLEQARSLRRNLTASGPRPN 287 (491)
Q Consensus 213 dv~v~~~~~~-g~~~i~~~~~~~-~~~~~~~ail~y~~~~~~~~~--~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~ 287 (491)
||+|++++++ |+|||++..... .....+.|+|+|.++...... +.+..|. .+.... ......+......+.
T Consensus 262 dvlv~~~~~~~~~y~ira~~~~~~~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~ 337 (541)
T TIGR03388 262 SVLLTTDQDPSRNYWISVGVRGRKPNTPPGLTVLNYYPNSPSRLPPTPPPVTPAWDDFDRS----KAFSLAIKAAMGSPK 337 (541)
T ss_pred EEEEeCCCCCCCcEEEEEecccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCCccccchh----hccchhhhccccCCC
Confidence 9999999866 589999876433 223467899999875432111 1111221 010000 000000100000111
Q ss_pred CCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCC----------CCCCCCC
Q 011178 288 PQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIP----------DNPTGGG 357 (491)
Q Consensus 288 p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~----------~~p~~~~ 357 (491)
+. ...++++.+.......++..+|++|+.+|..|..|+|.+.+.+..++++.+... ..+....
T Consensus 338 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (541)
T TIGR03388 338 PP-------ETSDRRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPNPN 410 (541)
T ss_pred CC-------CCCCcEEEEeccCcccCceEEEEECcccCCCCCccHHHHHhhcCCccccCCCCcccccccccccCCCcccc
Confidence 11 123455443332212234567999999998888898876654443333321110 0011123
Q ss_pred cceeeeEEeecCCcEEEEEEEcCC------CCCCceeccCCCeEEEeeccCCCCCC-CCCCcccCCCCceeeEEeCCCCE
Q 011178 358 AYLQTSVMAADFRGFAEVVFENPE------DTLQSWHIDGHNFFAVGMDGGEWTPA-SRLTYNLRDTISRCTVQVYPKSW 430 (491)
Q Consensus 358 ~~~~~~~~~~~~g~~v~~~i~N~~------~~~HP~HlHG~~F~Vl~~g~g~~~~~-~~~~~~~~~p~~rDTv~v~p~~~ 430 (491)
.+.++.++.++.|++||++|+|.. ...||||||||+||||++|.|.|+.. ....+|+.||++|||+.|++++|
T Consensus 411 ~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~vlg~g~g~~~~~~~~~~~n~~nP~~RDTv~vp~~gw 490 (541)
T TIGR03388 411 TTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGW 490 (541)
T ss_pred cccCceEEEecCCCeEEEEEECCccccCCCCCCCcEEecCCceEEEeeccCCCCcccCcccccCCCCCEeceEEeCCCce
Confidence 344678889999999999999974 35799999999999999999988754 23468999999999999999999
Q ss_pred EEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcchhcc
Q 011178 431 TAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 484 (491)
Q Consensus 431 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~ 484 (491)
++|||+|||||.|+|||||++|+..||+++|... +++ .+.+|+++++|+
T Consensus 491 vvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~e~-~~~----~~~~P~~~~~C~ 539 (541)
T TIGR03388 491 TALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEG-VEK----VGKLPKEALGCG 539 (541)
T ss_pred EEEEEECCCCeEeeeeccchhhhhcccEEEEecc-ccc----cCCCCccccCCC
Confidence 9999999999999999999999999999999654 333 356899999997
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=727.04 Aligned_cols=469 Identities=29% Similarity=0.491 Sum_probs=354.5
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecC-CCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeE
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFI-YMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFY 78 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l-~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wY 78 (491)
|-.++..+||+|++ ||+|+|+|+|+| .++++|||||+++.+++|+||+++ +||+|+||++|+|+|++ +++|||||
T Consensus 46 ~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pg~s~~y~f~~-~~~Gt~wy 124 (566)
T PLN02604 46 ITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVV-DRPGTYLY 124 (566)
T ss_pred EEECCccCCCcEEEECCCEEEEEEEeCCCCCCCCEEeCCCCCCCCccccCCCccccCccCCCCeEEEEEEc-CCCEEEEE
Confidence 34466778888887 478899999998 589999999999999999999998 99999999999999999 59999999
Q ss_pred eCCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcC--CCCCCCceEEEcCcCC-----
Q 011178 79 FPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG--SDLPFPDGLVINGRGS----- 151 (491)
Q Consensus 79 H~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~vNG~~~----- 151 (491)
|||...|+.+||+|+|||++++..+.++ .+|+|.+|+|+||++++..++...+... ....+++..+|||++.
T Consensus 125 H~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~d~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~G~~~~~~ 203 (566)
T PLN02604 125 HAHYGMQREAGLYGSIRVSLPRGKSEPF-SYDYDRSIILTDWYHKSTYEQALGLSSIPFDWVGEPQSLLIQGKGRYNCSL 203 (566)
T ss_pred eeCcHHHHhCCCeEEEEEEecCCCCCcc-ccCcceEEEeeccccCCHHHHHHhhccCCCccCCCCCceEEcCCCCCCCcc
Confidence 9999999999999999999876555556 4689999999999999865543222211 1224679999999853
Q ss_pred ------------------CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEE
Q 011178 152 ------------------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYS 213 (491)
Q Consensus 152 ------------------~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~d 213 (491)
..+++++++|++|||||||+|..+.+.|+|++|+|+|||+||.+++|.+++.|.|++|||||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRlINa~~~~~~~~sidgH~~~VIa~DG~~v~P~~v~~l~l~~GqRyd 283 (566)
T PLN02604 204 VSSPYLKAGVCNATNPECSPYVLTVVPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYS 283 (566)
T ss_pred ccCccccccccccCCCCCCceEEEecCCCEEEEEEEeccccceEEEEECCCEEEEEEeCCEecccceeeeEEEccCCeEE
Confidence 12378999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCc-ceEEEEEeecc-CCCcceEEEEEecCCCCCCCCC--CCCCCC-ccccchhhhhhhhccCCCCCCCCCCC
Q 011178 214 VLVRADQPPQ-GYYIVISTRFT-SQVLSATSVLHYSNSAGSVSGP--PPGGPT-TQIDWSLEQARSLRRNLTASGPRPNP 288 (491)
Q Consensus 214 v~v~~~~~~g-~~~i~~~~~~~-~~~~~~~ail~y~~~~~~~~~~--~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p 288 (491)
|+|++++++| +|||++..... .+...+.|||+|.+.......+ .+..+. .+....+..... +......+.
T Consensus 284 vlV~~~~~~~~~y~ira~~~~~~~~~~~~~aIL~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~- 358 (566)
T PLN02604 284 VLVKADQDPSRNYWVTTSVVSRNNTTPPGLAIFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLA----IKARHGYIH- 358 (566)
T ss_pred EEEECCCCCCCCEEEEEecccCCCCCcceeEEEEECCCCCCCCCCCCCCCCCcccccchhhcchhc----ccccccCcC-
Confidence 9999998765 79999865432 2346788999998643211111 010111 000000110000 000000000
Q ss_pred CCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCC-CC----------CCCC
Q 011178 289 QGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD-NP----------TGGG 357 (491)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~-~p----------~~~~ 357 (491)
......++++.+.......++...|+||+.+|..+..|++.+.+...++.|+.+.... .+ ....
T Consensus 359 -----~~~~~~d~~~~~~~~~~~~~~~~~w~in~~~~~~p~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (566)
T PLN02604 359 -----PPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYDFANYDIYAKPNNSN 433 (566)
T ss_pred -----CCCCCCCeEEEEeccccccCCeEEEEECcccCCCCCCchhHhhhhcCCCcccCCCCCcccccccccccCCccccc
Confidence 0011345565543322223356799999999988888988765554455554221100 00 0112
Q ss_pred cceeeeEEeecCCcEEEEEEEcCC------CCCCceeccCCCeEEEeeccCCCCCCC-CCCcccCCCCceeeEEeCCCCE
Q 011178 358 AYLQTSVMAADFRGFAEVVFENPE------DTLQSWHIDGHNFFAVGMDGGEWTPAS-RLTYNLRDTISRCTVQVYPKSW 430 (491)
Q Consensus 358 ~~~~~~~~~~~~g~~v~~~i~N~~------~~~HP~HlHG~~F~Vl~~g~g~~~~~~-~~~~~~~~p~~rDTv~v~p~~~ 430 (491)
.+.+..++.++.|++||++|+|.. ...||||||||+||||++|.|.|++.. ...+|+.||++|||+.|++++|
T Consensus 434 ~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGH~F~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gw 513 (566)
T PLN02604 434 ATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGW 513 (566)
T ss_pred cccCceEEEccCCCeEEEEEECCccccCCCCCCCCEEecCCceEEEEecCCCCCccccccccCCCCCCccceEEeCCCce
Confidence 233567889999999999999985 356999999999999999999887643 3468999999999999999999
Q ss_pred EEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcchhcccccC
Q 011178 431 TAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG 488 (491)
Q Consensus 431 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~ 488 (491)
++|||+|||||.|+|||||++|+..||+++|... +++ .+++|++++.|+.-+|
T Consensus 514 vvIRF~aDNPG~WlfHCHI~~Hl~~GM~~v~~e~-~~~----~~~~p~~~~~C~~~~~ 566 (566)
T PLN02604 514 TALRFRADNPGVWAFHCHIESHFFMGMGVVFEEG-IER----VGKLPSSIMGCGESKG 566 (566)
T ss_pred EEEEEECCCCeEeeEeecchhHhhcCCEEEEeeC-hhh----ccCCCCCcCccccCCC
Confidence 9999999999999999999999999999999754 333 4678999999987654
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-89 Score=719.47 Aligned_cols=453 Identities=22% Similarity=0.358 Sum_probs=340.8
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeC-CCccceeE
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVK-DQIGSYFY 78 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~-~~~Gt~wY 78 (491)
..++..+||+|++ ||+|+|+|+|+|+ ++|+|||||++|.+++||||+++ |||||+||++|+|+|++. +++|||||
T Consensus 31 ~~NG~~PGP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~vTQcpI~PG~sf~Y~f~~~~~q~GT~WY 110 (538)
T TIGR03390 31 VVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPIPPGHFFDYEIKPEPGDAGSYFY 110 (538)
T ss_pred EECCcCCCCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcccccCCCCCCCcEEEEEEecCCCCeeeEE
Confidence 3467788999987 4889999999997 89999999999999999999999 999999999999999985 58999999
Q ss_pred eCCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcC--CCCCCCceEEEcCcCC-----
Q 011178 79 FPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG--SDLPFPDGLVINGRGS----- 151 (491)
Q Consensus 79 H~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~vNG~~~----- 151 (491)
|||.+.|+. ||+|+|||++++.. ++ .+|+|++|+|+||+++...++...+... ....++++++|||+..
T Consensus 111 HsH~~~Q~~-~l~G~lIV~~~~~~--~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~ 186 (538)
T TIGR03390 111 HSHVGFQAV-TAFGPLIVEDCEPP--PY-KYDDERILLVSDFFSATDEEIEQGLLSTPFTWSGETEAVLLNGKSGNKSFY 186 (538)
T ss_pred ecCCchhhh-cceeEEEEccCCcc--CC-CccCcEEEEEeCCCCCCHHHHHhhhhccCCccCCCCceEEECCcccccccc
Confidence 999999986 59999999987533 33 4589999999999999877654333222 1235678999999952
Q ss_pred ---------CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCce-eEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCC
Q 011178 152 ---------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHK-MLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 221 (491)
Q Consensus 152 ---------~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~-~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~ 221 (491)
..++++|++|++|||||||+|..+.+.|+|++|+ |+|||+||.+++|..++.|.|++||||||+|+++++
T Consensus 187 ~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~~~~P~~v~~l~l~~GqRydVlv~~~~~ 266 (538)
T TIGR03390 187 AQINPSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPAKIDHLQLGGGQRYSVLFKAKTE 266 (538)
T ss_pred ccccCCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCCCCCceEeCeEEEccCCEEEEEEECCCc
Confidence 1368999999999999999999999999999999 999999999999999999999999999999999974
Q ss_pred -------CcceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCc
Q 011178 222 -------PQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHY 294 (491)
Q Consensus 222 -------~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 294 (491)
+|+|||++.....++.....|+|+|.++........|..|. ++............|.+......+. .+
T Consensus 267 ~~~~~~~~~~Y~ir~~~~~~~~~~~~~aiL~Y~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~l~pl~~~~~~~--~~- 341 (538)
T TIGR03390 267 DELCGGDKRQYFIQFETRDRPKVYRGYAVLRYRSDKASKLPSVPETPP--LPLPNSTYDWLEYELEPLSEENNQD--FP- 341 (538)
T ss_pred cccccCCCCcEEEEEeecCCCCcceEEEEEEeCCCCCCCCCCCCCCCC--CCccCcchhhhheeeEecCccccCC--CC-
Confidence 48999999865444445678999998654222111111111 0000000000011222221110000 00
Q ss_pred cccccceEEEEeccccC--cCCeEeEEEcCeeeeC--CCCccccccccCCCCccccCCCCC-CCCCCCcceeeeEEeecC
Q 011178 295 GLINTTHTIRLQNTAPT--INGKQRYAVNSVSFIP--ADTPLKLADYFKIPGVFSVGSIPD-NPTGGGAYLQTSVMAADF 369 (491)
Q Consensus 295 ~~~~~~~~~~l~~~~~~--~~~~~~~~iNg~~f~~--~~~p~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~ 369 (491)
.....++++.+...... .++..+|++||.+|.. +..|+|...+.+. .......+ .+.......++.++.++.
T Consensus 342 ~~~~~d~~~~l~~~~~~~~~~g~~~~~~N~~s~~~~~~~~P~L~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (538)
T TIGR03390 342 TLDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDIYENG---LPATPNYTAALANYGFDPETRAFPAKV 418 (538)
T ss_pred CCCcCceEEEEEccccccccCCeEEEEECCcccCCCCCCCchHHHHhcCC---CCcCCCcccccccCCcCcCceEEEcCC
Confidence 01234666666554321 2456899999999975 7889876544321 00000000 000011223456788999
Q ss_pred CcEEEEEEEcCC--------CCCCceeccCCCeEEEeeccCCCCCCC-CCCcccCCCCceeeEEeC----------CCCE
Q 011178 370 RGFAEVVFENPE--------DTLQSWHIDGHNFFAVGMDGGEWTPAS-RLTYNLRDTISRCTVQVY----------PKSW 430 (491)
Q Consensus 370 g~~v~~~i~N~~--------~~~HP~HlHG~~F~Vl~~g~g~~~~~~-~~~~~~~~p~~rDTv~v~----------p~~~ 430 (491)
|++|||+|+|.. ...||||||||+||||++|.|.|++.. ...+++.||++|||+.|+ +++|
T Consensus 419 ~~~V~ivi~n~~~~~~~~~~~~~HP~HlHGh~F~vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~~~~~~~~~~~~~ 498 (538)
T TIGR03390 419 GEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEAKLENYTPVLRDTTMLYRYAVKVVPGAPAGW 498 (538)
T ss_pred CCEEEEEEECCcccccCCCCCCCCCeeecCCcEEEEcccccccCCccChhhhccCCCCeecceeeccccccccccCCCce
Confidence 999999999974 467999999999999999999998643 235788899999999996 7899
Q ss_pred EEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCc
Q 011178 431 TAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 431 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 468 (491)
++|||++||||.|+|||||.+|+..||++.|.|.+.++
T Consensus 499 ~~ir~~~dNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~ 536 (538)
T TIGR03390 499 RAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGDAED 536 (538)
T ss_pred EEEEEEcCCCeeEEEeccchhhhhccceEEEEeCChHH
Confidence 99999999999999999999999999999999987655
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-75 Score=608.11 Aligned_cols=387 Identities=18% Similarity=0.197 Sum_probs=281.8
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.++..+|||||+. |+|+|+|+|+|+++|+|||||+++.+. +||++ ||+|+||++|+|+|++.+++|||||||
T Consensus 68 ~~yNg~~PGPtIr~~~Gd~v~v~~~N~L~~~ttiHwHGl~~~~~--~DG~p--q~~I~PG~s~~Y~f~~~q~aGT~WYH~ 143 (523)
T PRK10965 68 WGYNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEVPGE--VDGGP--QGIIAPGGKRTVTFTVDQPAATCWFHP 143 (523)
T ss_pred EEECCCCCCceEEEECCCEEEEEEEECCCCCccEEcccccCCCc--cCCCC--CCCCCCCCEEEEEeccCCCCceEEEec
Confidence 445678899999984 899999999999999999999998664 99986 899999999999999975689999999
Q ss_pred Cc----cccccCCceeEEEEecCCCCCCCCCC--CCCcceEEeeecccCCHHHHHHHHhc--CCCCCCCceEEEcCcCCC
Q 011178 81 SL----AFHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKAILDS--GSDLPFPDGLVINGRGSN 152 (491)
Q Consensus 81 H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~~vNG~~~~ 152 (491)
|. ..|+++||+|+|||+++++.+.+++. ..+|++|+|+||+++.++++...... ......+|.++|||+.
T Consensus 144 H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~~~~~~~~~~g~~gd~~lVNG~~-- 221 (523)
T PRK10965 144 HQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-- 221 (523)
T ss_pred CCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCceeccccccccccCccCCeEEECCcc--
Confidence 96 59999999999999998654333332 45699999999999876654221111 1124568999999998
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEE-eCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEE
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIS 230 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i-~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~ 230 (491)
.|.+.++ +++|||||||+|+.+.+.|++ ++|+|+|||.||+++ +|..++.|.|+|||||||+|++++ .+.|.|.+.
T Consensus 222 ~p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~vIa~DG~~l~~P~~v~~l~lapGeR~dvlv~~~~-~~~~~l~~~ 299 (523)
T PRK10965 222 YPQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYVIASDGGLLAEPVKVSELPILMGERFEVLVDTSD-GKAFDLVTL 299 (523)
T ss_pred cceeecC-CCEEEEEEEeccCCceEEEEEcCCceEEEEEeCCCcccCccEeCeEEECccceEEEEEEcCC-CceEEEEEe
Confidence 8888885 579999999999999999998 899999999999986 899999999999999999999984 577998876
Q ss_pred eeccC-----CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEE
Q 011178 231 TRFTS-----QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRL 305 (491)
Q Consensus 231 ~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l 305 (491)
..... .......++++.........++|... ....+.+.+. ....|++.+
T Consensus 300 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l------------------~~~~~~~~~~-------~~~~r~~~l 354 (523)
T PRK10965 300 PVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSL------------------ASLPALPSLE-------GLTVRRLQL 354 (523)
T ss_pred cccCcccccccCCCceeEEEEeccCcCCCCcCChhh------------------ccCCCCCccc-------ccceeEEEE
Confidence 43211 01113355555533211111122100 0000000000 000111111
Q ss_pred eccc--------------c--------------Cc---------C-----Ce-----EeEEEcCeeeeCCCCcccccccc
Q 011178 306 QNTA--------------P--------------TI---------N-----GK-----QRYAVNSVSFIPADTPLKLADYF 338 (491)
Q Consensus 306 ~~~~--------------~--------------~~---------~-----~~-----~~~~iNg~~f~~~~~p~~~~~~~ 338 (491)
.... . .. . +. ..|+|||++|.. +.|
T Consensus 355 ~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~-~~~------- 426 (523)
T PRK10965 355 SMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFDM-NKP------- 426 (523)
T ss_pred eeccccchhhhhhccccccccccccccccccccccccccccccccccccccccccccccccCCCeECCC-CCc-------
Confidence 1000 0 00 0 00 125788888742 111
Q ss_pred CCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCC
Q 011178 339 KIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT 417 (491)
Q Consensus 339 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p 417 (491)
.+.++.|++++|+|.|.+. +.|||||||++|||+++++... ....+
T Consensus 427 -------------------------~~~~~~G~~e~w~i~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~--------~~~~~ 473 (523)
T PRK10965 427 -------------------------MFAAKKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP--------AAHRA 473 (523)
T ss_pred -------------------------ceecCCCCEEEEEEEeCCCCCccCeEEeCcEEEEEEecCCCC--------Ccccc
Confidence 1457899999999999985 6899999999999999964321 12345
Q ss_pred CceeeEEeCCCCEEEEEEEc----cCcceeeeeecchhhhhcceEEEEEEe
Q 011178 418 ISRCTVQVYPKSWTAVYVPL----DNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 418 ~~rDTv~v~p~~~~~irf~a----dnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|||||.|++ +.++|++++ +++|.||||||||+|||.|||..|+|.
T Consensus 474 ~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL~Hed~GMM~~~~V~ 523 (523)
T PRK10965 474 GWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLLEHEDTGMMLGFTVS 523 (523)
T ss_pred ccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCchhhhccCccceeEeC
Confidence 7999999987 667776665 467799999999999999999999984
|
|
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-74 Score=605.74 Aligned_cols=404 Identities=21% Similarity=0.226 Sum_probs=296.4
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++..+||+|++. |+|+|+|+|+|+++|+|||||+++. +.+||+|+ +||+|+||++|+|+|++. ++||||||
T Consensus 67 ~~~Ng~~PGP~ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DGvP~vt~~~I~PG~s~~Y~f~~~-~~GTyWYH 143 (587)
T TIGR01480 67 ITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILLP--FQMDGVPGVSFAGIAPGETFTYRFPVR-QSGTYWYH 143 (587)
T ss_pred EEECCccCCceEEEECCCEEEEEEEcCCCCCceEEcCCCcCC--ccccCCCcccccccCCCCeEEEEEECC-CCeeEEEe
Confidence 345678899999884 8999999999999999999999974 46999999 999999999999999994 89999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHh----------------------cCC-
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILD----------------------SGS- 136 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~----------------------~~~- 136 (491)
||...|+.+||+|+|||++++.++. .+|+|++|+|+||++.+..++...+. .|.
T Consensus 144 sH~~~q~~~GL~G~lIV~~~~~~p~---~~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~~ 220 (587)
T TIGR01480 144 SHSGFQEQAGLYGPLIIDPAEPDPV---RADREHVVLLSDWTDLDPAALFRKLKVMAGHDNYYKRTVADFFRDVRNDGLK 220 (587)
T ss_pred cCchhHhhccceEEEEECCCccccC---CCCceEEEEeeecccCCHHHHHHhhhcccccccccccchhhhhhhhcccccc
Confidence 9999999999999999998654333 45899999999999876554422111 010
Q ss_pred --------C-------C------CCCceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCc
Q 011178 137 --------D-------L------PFPDGLVINGRGS-NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGT 194 (491)
Q Consensus 137 --------~-------~------~~~~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~ 194 (491)
. . .....+||||+.. ..+++.+++|++|||||||+|+.+.+.|+|+||+|+||++||.
T Consensus 221 ~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~~~~~~~~v~~G~rvRLR~INas~~~~f~l~I~gh~m~VIa~DG~ 300 (587)
T TIGR01480 221 QTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSAMTYFDVRIPGLKLTVVAVDGQ 300 (587)
T ss_pred ccccccccccccccCCcccccccCccceEEEcCccCCCCceEEECCCCEEEEEEEecCCCceEEEEECCCEEEEEEcCCc
Confidence 0 0 0012489999973 2356999999999999999999999999999999999999999
Q ss_pred cCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCC---ccccc-h--
Q 011178 195 HTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPT---TQIDW-S-- 268 (491)
Q Consensus 195 ~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~---~~~~~-~-- 268 (491)
+++|+.++.+.|+|||||||+|+++ ..|.|+|++..... ...+.++|++.+.......+++..|. .+... .
T Consensus 301 ~v~Pv~vd~l~I~pGeRyDVlV~~~-~~g~~~i~a~~~~~--~~~~~~~l~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~ 377 (587)
T TIGR01480 301 YVHPVSVDEFRIAPAETFDVIVEPT-GDDAFTIFAQDSDR--TGYARGTLAVRLGLTAPVPALDPRPLLTMKDMGMGGMH 377 (587)
T ss_pred CcCceEeCeEEEcCcceeEEEEecC-CCceEEEEEEecCC--CceEEEEEecCCCCCCCCCCCCCccccChhhccccccc
Confidence 9999999999999999999999987 45789999876432 23677788876431111111111110 01000 0
Q ss_pred -------hhh--hhhhcc----------C---C--CCC----------------CCCC-------------CCCCCCC--
Q 011178 269 -------LEQ--ARSLRR----------N---L--TAS----------------GPRP-------------NPQGSYH-- 293 (491)
Q Consensus 269 -------~~~--~~~~~~----------~---l--~~~----------------~~~~-------------~p~~~~~-- 293 (491)
+.. ...... + + ... ...+ ...+...
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 457 (587)
T TIGR01480 378 HGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMAMDASPKHPASEPLNPLVDMIVDMPMDRMDDPGIGLRDNGRRVLTYA 457 (587)
T ss_pred ccccccccccCcccccCccccccccccCccccccccccccCcccccCCccccccccCcccccCCCCcccccCCcceeehh
Confidence 000 000000 0 0 000 0000 0000000
Q ss_pred --------ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEE
Q 011178 294 --------YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVM 365 (491)
Q Consensus 294 --------~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 365 (491)
.....++|++.+.... .-....|+|||+.|.+ .. .+
T Consensus 458 ~l~~~~~~~~~~~p~r~~~~~L~g--~m~~~~wtiNG~~~~~-~~---------------------------------pl 501 (587)
T TIGR01480 458 DLHSLFPPPDGRAPGREIELHLTG--NMERFAWSFDGEAFGL-KT---------------------------------PL 501 (587)
T ss_pred hccccccccCcCCCCceEEEEEcC--CCceeEEEECCccCCC-CC---------------------------------ce
Confidence 0012355666655421 1135679999988742 11 14
Q ss_pred eecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeee
Q 011178 366 AADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNI 445 (491)
Q Consensus 366 ~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~ 445 (491)
.++.|++|+|+|.|.+.+.|||||||+.|+++..+ |.+ +.++||+.|+|++++.++|++||||.|+|
T Consensus 502 ~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~~~~-G~~------------~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~ 568 (587)
T TIGR01480 502 RFNYGERLRVVLVNDTMMAHPIHLHGMWSELEDGQ-GEF------------QVRKHTVDVPPGGKRSFRVTADALGRWAY 568 (587)
T ss_pred EecCCCEEEEEEECCCCCCcceeEcCceeeeecCC-Ccc------------cccCCceeeCCCCEEEEEEECCCCeEEEE
Confidence 57899999999999999999999999999998653 321 34789999999999999999999999999
Q ss_pred eecchhhhhcceEEEEEEe
Q 011178 446 RSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 446 HCHil~H~d~GMm~~~~V~ 464 (491)
|||++.|++.|||..++|.
T Consensus 569 HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 569 HCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred cCCCHHHHhCcCcEEEEeC
Confidence 9999999999999999873
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-73 Score=589.53 Aligned_cols=378 Identities=17% Similarity=0.151 Sum_probs=274.2
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.++..+|||||+. |+|+|+|+|+|+++|+|||||+++++. .+||+ +++|+||++|+|+|++.+++|||||||
T Consensus 68 ~~~ng~~pGPtir~~~Gd~v~v~v~N~L~~~ttiHwHGl~~~~~-~~~g~---~~~I~PG~~~~y~f~~~~~aGT~WYH~ 143 (471)
T PRK10883 68 WGINGRYLGPTIRVWKGDDVKLIYSNRLTEPVSMTVSGLQVPGP-LMGGP---ARMMSPNADWAPVLPIRQNAATCWYHA 143 (471)
T ss_pred EEECCcccCCeEEEECCCEEEEEEEeCCCCCCceeECCccCCCC-CCCCc---cccCCCCCeEEEEEecCCCceeeEEcc
Confidence 345677899999884 899999999999999999999998765 56775 478999999999999976799999999
Q ss_pred Ccc----ccccCCceeEEEEecCCCCCCCCCC--CCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCCcc
Q 011178 81 SLA----FHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN 154 (491)
Q Consensus 81 H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~~~ 154 (491)
|.+ .|+++||+|+|||+++.+.+.+++. ..+|++|+|+||+++....... .........+|.++|||+. .|
T Consensus 144 H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~-~~~~~~g~~gd~~lvNG~~--~p 220 (471)
T PRK10883 144 NTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY-NEPGSGGFVGDTLLVNGVQ--SP 220 (471)
T ss_pred CCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCccc-cccccCCccCCeeEECCcc--CC
Confidence 975 5999999999999997654334332 3459999999999986543211 1112234578999999999 89
Q ss_pred eEEEeCCCEEEEEEEEcCCCCeEeEEE-eCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 155 TFTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 155 ~~~v~~g~~~rlR~iN~~~~~~~~~~i-~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
.++|++| +|||||||+|+.+.+.|+| ++|+|+|||.||+++ +|..++.|.|+|||||||+|++++ .+.+.|.+...
T Consensus 221 ~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~vIa~DGg~~~~P~~~~~l~l~pGeR~dvlVd~~~-~~~~~l~~~~~ 298 (471)
T PRK10883 221 YVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLHVIAGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITAGEA 298 (471)
T ss_pred eEEecCC-EEEEEEEEccCCceEEEEEcCCCeEEEEEeCCCcccCCcEeCeEEECCCCeEEEEEECCC-CceEEEECCCc
Confidence 9999875 8999999999999999999 899999999997765 899999999999999999999974 34566655321
Q ss_pred ccCC-C------c----ceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccce
Q 011178 233 FTSQ-V------L----SATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTH 301 (491)
Q Consensus 233 ~~~~-~------~----~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~ 301 (491)
.... . . ....++++..... .+..+ . .+...+.+.. ..+ ......+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~----------~~p~~l~~~~--~~~------~~~~~~~ 354 (471)
T PRK10883 299 AGIVDRLRGFFEPSSILVSTLVLTLRPTGL-----LPLVT-D----------NLPMRLLPDE--IME------GSPIRSR 354 (471)
T ss_pred cccccccccccCCccccccceeEEEEcccc-----ccCCC-C----------cCChhhcCCC--CCC------CCCcceE
Confidence 1000 0 0 0011222221100 00000 0 0000011100 000 0011223
Q ss_pred EEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC
Q 011178 302 TIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381 (491)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~ 381 (491)
++.+.. ..|.|||++|.+...+ +.++.|++++|.|.|.
T Consensus 355 ~~~l~~--------~~~~INg~~~~~~~~~---------------------------------~~~~~g~~e~W~~~n~- 392 (471)
T PRK10883 355 EISLGD--------DLPGINGALWDMNRID---------------------------------VTAQQGTWERWTVRAD- 392 (471)
T ss_pred EEEecC--------CcCccCCcccCCCcce---------------------------------eecCCCCEEEEEEECC-
Confidence 444421 2478999998531111 3568899999999886
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcc----eeeeeecchhhhhcce
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG----MWNIRSENWARQYLGQ 457 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG----~w~~HCHil~H~d~GM 457 (491)
+.|||||||+.|||+++++... ...+..|||||.|+ +.++|+++++++| .||||||||+|||.||
T Consensus 393 -~~HP~HlHg~~FqVl~~~G~~~--------~~~~~gwkDTV~v~--~~v~i~~~f~~~~~~~~~~m~HCHiLeHeD~GM 461 (471)
T PRK10883 393 -MPQAFHIEGVMFLIRNVNGAMP--------FPEDRGWKDTVWVD--GQVELLVYFGQPSWAHFPFLFYSQTLEMADRGS 461 (471)
T ss_pred -CCcCEeECCccEEEEEecCCCC--------CccccCcCcEEEcC--CeEEEEEEecCCCCCCCcEEeecccccccccCC
Confidence 5899999999999999964321 11224699999995 4699999999887 8999999999999999
Q ss_pred EEEEEEecC
Q 011178 458 QFYLRVYSS 466 (491)
Q Consensus 458 m~~~~V~~~ 466 (491)
|..|+|.++
T Consensus 462 M~~~~V~~~ 470 (471)
T PRK10883 462 IGQLLVNPA 470 (471)
T ss_pred ccCeEEecC
Confidence 999999653
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-59 Score=489.65 Aligned_cols=390 Identities=21% Similarity=0.221 Sum_probs=280.6
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|..+.+.+||+||++ |+|+|+++|.|.++|+|||||+.++ +.+||++. +|+++.||++++|.|+.. ++||||||
T Consensus 55 ~~~~g~~~gP~i~~~~Gd~v~l~~~N~l~~~t~vh~HG~~~p--~~~dG~~~~~~~~~~~~~~~~y~f~~~-~~gT~wyh 131 (451)
T COG2132 55 WGYNGALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGLPVP--GEMDGVPPLTQIPPGPGETPTYTFTQD-VPGTYWYH 131 (451)
T ss_pred EEecccccCceEEEecCCEEEEEEEeCCCCCceEEEcCcccC--ccccCCCcccccCCCCCCcEEEeecCC-CCcceEec
Confidence 455668999999985 7999999999988899999998875 56999988 999999999999999994 68899999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCCcceEEEe
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVD 159 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~~~~~~v~ 159 (491)
+|.+.|+++||+|++||+++.+.+. .+|++.++++.+|........... ........++..+|||+. .+.+.++
T Consensus 132 ~H~~~Q~~~Gl~G~~II~~~~~~~~---~~d~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~vnG~~--~p~~~~~ 205 (451)
T COG2132 132 PHTHGQVYDGLAGALIIEDENSEPL---GVDDEPVILQDDWLDEDGTDLYQE-GPAMGGFPGDTLLVNGAI--LPFKAVP 205 (451)
T ss_pred cCCCchhhcccceeEEEeCCCCCCC---CCCceEEEEEeeeecCCCCccccC-CccccCCCCCeEEECCCc--cceeecC
Confidence 9999999999999999999865444 347777777777776654333211 112244567899999977 5666665
Q ss_pred CCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcc
Q 011178 160 QGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLS 239 (491)
Q Consensus 160 ~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~ 239 (491)
+++||||++|+++.+.+.+++.+++|+||++||.++++..++.+.|+|||||||++++++ .+.+.|.+....... .
T Consensus 206 -~g~~rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p~er~~v~v~~~~-~~~~~l~~~~~~~~~--~ 281 (451)
T COG2132 206 -GGVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDMND-GGAVTLTALGEDMPD--T 281 (451)
T ss_pred -CCeEEEEEEecCCceEEEEEecCceEEEEEeCCcCcCceeeeeEEecCcceEEEEEEcCC-CCeEEEEeccccCCc--e
Confidence 557999999999888999999999999999999999888899999999999999999984 566777765511111 1
Q ss_pred eEEEEEecCCCCCC---CCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeE
Q 011178 240 ATSVLHYSNSAGSV---SGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQ 316 (491)
Q Consensus 240 ~~ail~y~~~~~~~---~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (491)
..+........... .......+..+. ...... ..+......+.+ .....+.+.. ..+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~--~~~~~~~~~~~~---------~~~~~~~l~~----~~~~~ 343 (451)
T COG2132 282 LKGFRAPNPILTPSYPVLNGRVGAPTGDM---ADHAPV--GLLVTILVEPGP---------NRDTDFHLIG----GIGGY 343 (451)
T ss_pred eeeeeccccccccccccccccccCCCcch---hhcccc--ccchhhcCCCcc---------cccccchhhc----ccccc
Confidence 11221111100000 000000110000 000000 000000000000 0011111111 12345
Q ss_pred eEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEE
Q 011178 317 RYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFA 396 (491)
Q Consensus 317 ~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~V 396 (491)
.|.+|++.|.+. ...+.++.|++++|+|.|.+.+.|||||||+.|+|
T Consensus 344 ~~~~n~~~~~~~---------------------------------~~~~~~~~G~~~~~~i~n~~~~~HP~HlHg~~F~v 390 (451)
T COG2132 344 VWAINGKAFDDN---------------------------------RVTLIAKAGTRERWVLTNDTPMPHPFHLHGHFFQV 390 (451)
T ss_pred cccccCccCCCC---------------------------------cCceeecCCCEEEEEEECCCCCccCeEEcCceEEE
Confidence 688888777431 11246788999999999999999999999999999
Q ss_pred EeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEec
Q 011178 397 VGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 397 l~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 465 (491)
++.+ . ......+.||||+.+.+++.++|+|.+++||.|+||||+++|++.|||..+.|..
T Consensus 391 ~~~~-~--------~~~~~~~~~kDTv~v~~~~~~~v~~~a~~~g~~~~HCH~l~H~~~Gm~~~~~v~~ 450 (451)
T COG2132 391 LSGD-A--------PAPGAAPGWKDTVLVAPGERLLVRFDADYPGPWMFHCHILEHEDNGMMGQFGVVP 450 (451)
T ss_pred EecC-C--------CcccccCccceEEEeCCCeEEEEEEeCCCCCceEEeccchhHhhcCCeeEEEecC
Confidence 9997 1 1233456899999999999999999999999999999999999999999998853
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=340.76 Aligned_cols=235 Identities=17% Similarity=0.154 Sum_probs=189.8
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCcccee
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~w 77 (491)
|-.++..+||+|++ ||+|+|+|+|+++ .++++||||.. ++||++. +| |.||++|+|+|++ +++||||
T Consensus 50 ~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~-----~~dg~~~~~~--I~PG~t~ty~F~~-~~~Gty~ 121 (311)
T TIGR02376 50 MTFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT-----GALGGAALTQ--VNPGETATLRFKA-TRPGAFV 121 (311)
T ss_pred EEECCcccCceEEEECCCEEEEEEEeCCCCCCceeeeecCCC-----ccCCCCccee--ECCCCeEEEEEEc-CCCEEEE
Confidence 44567789999987 4899999999986 57899999963 4788876 66 9999999999999 5899999
Q ss_pred EeCCc----cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHh-c--CCCCCCCceEEEcCcC
Q 011178 78 YFPSL----AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILD-S--GSDLPFPDGLVINGRG 150 (491)
Q Consensus 78 YH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~-~--~~~~~~~~~~~vNG~~ 150 (491)
||||. ..|+.+||+|+|||++++..+ ..|+|++|+++||+++.......... . ......+++++|||+.
T Consensus 122 YH~H~~~~~~~q~~~Gl~G~liV~~~~~~~----~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~ 197 (311)
T TIGR02376 122 YHCAPPGMVPWHVVSGMNGAIMVLPREGLP----EYDKEYYIGESDLYTPKDEGEGGAYEDDVAAMRTLTPTHVVFNGAV 197 (311)
T ss_pred EEcCCCCchhHHhhcCcceEEEeeccCCCc----CcceeEEEeeeeEeccccccccccccchHHHHhcCCCCEEEECCcc
Confidence 99995 479999999999999865322 45899999999999975432110000 0 0012467899999994
Q ss_pred C-CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCc--cCeEEEcCCceEEEEEEeCCCCcceEE
Q 011178 151 S-NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNT--YDSLDIHLGQSYSVLVRADQPPQGYYI 227 (491)
Q Consensus 151 ~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~--~~~l~l~pGeR~dv~v~~~~~~g~~~i 227 (491)
. ..+.+++++|+++||||||+|..+.+.|++.++.+++|+.||.++.+.. ++++.|+||||+||+|++++ +|.|++
T Consensus 198 ~~~~~~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~~DG~~~~~~~~~~~~~~i~PG~R~dv~v~~~~-pG~y~~ 276 (311)
T TIGR02376 198 GALTGDNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVWVTGKFANPPNRDVETWFIPGGSAAAALYTFEQ-PGVYAY 276 (311)
T ss_pred CCCCCCcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEEECCcccCCCCCCcceEEECCCceEEEEEEeCC-CeEEEE
Confidence 2 1467899999999999999999999999999999999999999997644 79999999999999999995 799999
Q ss_pred EEEeeccCCCcceEEEEEecCCC
Q 011178 228 VISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 228 ~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
++............|+|+|++..
T Consensus 277 ~~~~~~~~~~~g~~~~i~~~g~~ 299 (311)
T TIGR02376 277 VDHNLIEAFEKGAAAQVKVEGAW 299 (311)
T ss_pred ECcHHHHHHhCCCEEEEEECCCC
Confidence 98765432233578999998654
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=230.67 Aligned_cols=106 Identities=26% Similarity=0.437 Sum_probs=96.6
Q ss_pred eeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC
Q 011178 360 LQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 439 (491)
Q Consensus 360 ~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn 439 (491)
.+..++.++.|++|+|+|+|.+...|||||||++|+|++++.+.++......++..+|.||||+.|+++++++|||+++|
T Consensus 31 ~~~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~~~ 110 (138)
T PF07731_consen 31 GNTPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRADN 110 (138)
T ss_dssp STTSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEETS
T ss_pred CCcceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEeec
Confidence 35677899999999999999999999999999999999998877665555567889999999999999999999999999
Q ss_pred cceeeeeecchhhhhcceEEEEEEec
Q 011178 440 VGMWNIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 440 pG~w~~HCHil~H~d~GMm~~~~V~~ 465 (491)
||.|+|||||++|+|.|||+.|+|.+
T Consensus 111 ~G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 111 PGPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp TEEEEEEESSHHHHHTT-EEEEEECH
T ss_pred ceEEEEEEchHHHHhCCCeEEEEEcC
Confidence 99999999999999999999999865
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=219.81 Aligned_cols=96 Identities=29% Similarity=0.522 Sum_probs=88.2
Q ss_pred CCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 4 MNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 4 ~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
-.++..+||+||+. |+|+|+|+|+|+++++|||||+++...+|+||+++ +||+|.||++|+|+|++++++|||||||
T Consensus 18 ~~ng~~pGPtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~~~Y~~~~~~~~Gt~wYH~ 97 (117)
T PF07732_consen 18 TYNGQFPGPTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGESFTYEFTANQQAGTYWYHS 97 (117)
T ss_dssp EETTBSSEEEEEEETTEEEEEEEEEESSSGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEEEEEEEEESSCSEEEEEEE
T ss_pred EECCCCCCCEEEEEcCCeeEEEEEeccccccccccceeeeeeeeecCCcccccceeEEeecceeeeEeeeccccceeEee
Confidence 34677899999885 89999999999999999999999999899999999 9999999999999999976699999999
Q ss_pred CccccccCCceeEEEEecC
Q 011178 81 SLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 81 H~~~q~~~Gl~G~liV~~~ 99 (491)
|...|..+||+|+|||+++
T Consensus 98 H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 98 HVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp CSTTHHHTTEEEEEEEE-T
T ss_pred CCCchhcCcCEEEEEEcCC
Confidence 9998877999999999986
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=211.21 Aligned_cols=139 Identities=37% Similarity=0.676 Sum_probs=115.3
Q ss_pred CcceEEeeecccCCHHHHHH-HHhcC----CCCCCCceEEEcCcCC-----------CcceEEEeCCCEEEEEEEEcCCC
Q 011178 111 GDFTILAGDWYKKNHTDLKA-ILDSG----SDLPFPDGLVINGRGS-----------NANTFTVDQGKTYRFRISNVGIS 174 (491)
Q Consensus 111 ~e~~l~l~d~~~~~~~~~~~-~~~~~----~~~~~~~~~~vNG~~~-----------~~~~~~v~~g~~~rlR~iN~~~~ 174 (491)
.|++|+|+||++++...+.. .+..+ ..++++++++|||++. ..+++++++|++|||||||+|+.
T Consensus 1 ~e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~v~~g~~~rlRliNa~~~ 80 (159)
T PF00394_consen 1 EEYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGRFDCSSADYTGGEPPVIKVKPGERYRLRLINAGAS 80 (159)
T ss_dssp GGGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTCBTTCTTGSTTSTSGEEEEETTTEEEEEEEEESSS
T ss_pred CeEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCccccccccccccccccceEEEcCCcEEEEEEEeccCC
Confidence 37899999999987665533 33221 2377899999999653 25899999999999999999999
Q ss_pred CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeecc----CCCcceEEEEEecCC
Q 011178 175 TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT----SQVLSATSVLHYSNS 249 (491)
Q Consensus 175 ~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~----~~~~~~~ail~y~~~ 249 (491)
+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++++|+|+|++..... .....+.|+|+|.++
T Consensus 81 ~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~~~ 159 (159)
T PF00394_consen 81 TSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQPPGNYWIRASYQHDSINDPQNGNALAILRYDGA 159 (159)
T ss_dssp -BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECSCSSEEEEEEEESSSSSHSHGGGTTEEEEEETTS
T ss_pred eeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCCCCCeEEEEEecccCCCccCCCcEEEEEEEECCC
Confidence 999999999999999999999999999999999999999999999778999999963211 234678999999863
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.2e-16 Score=137.21 Aligned_cols=88 Identities=18% Similarity=0.201 Sum_probs=66.5
Q ss_pred CCCCeEEE--eeeEEEEEEecCC---CCCeeeecccCCCCCCCCCCCCC-CCCCCCCC---C-e--EEEEEEeCCCccce
Q 011178 9 SLGCSLIT--HLYTHLVVLNFIY---MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPG---K-N--FTYVLQVKDQIGSY 76 (491)
Q Consensus 9 ~~G~~l~v--~d~v~i~~~N~l~---~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG---~-~--~~Y~f~~~~~~Gt~ 76 (491)
..||+|+| ||+|+++|+|.++ ....||+||...+..+.|||++. +||+|.|+ + . .++.|+++ ++|||
T Consensus 49 ~~~P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~~~~~~~tf~f~-~aGty 127 (148)
T TIGR03095 49 LKNPTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGKFGYTDFTYHFS-TAGTY 127 (148)
T ss_pred CCCCEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCccceeEEEEECC-CCeEE
Confidence 45677776 4788999999965 33556666655444455999988 99998884 2 1 24455553 79999
Q ss_pred eEeCCccccccCCceeEEEEe
Q 011178 77 FYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 77 wYH~H~~~q~~~Gl~G~liV~ 97 (491)
|||||...|+.+||+|+|||+
T Consensus 128 wyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 128 WYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred EEEcCChhHHHCCCEEEEEEC
Confidence 999999999999999999995
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.7e-14 Score=137.64 Aligned_cols=243 Identities=12% Similarity=0.039 Sum_probs=154.4
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
.+.+++||+.. .|+|++++|+++++++.|... ...+.++++++. +.||... ...|.||+++.+.++++
T Consensus 47 ~~~~~~nG~~p-GP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~dg~~~------~~~I~PG~t~ty~F~~~ 115 (311)
T TIGR02376 47 YQAMTFDGSVP-GPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GALGGAA------LTQVNPGETATLRFKAT 115 (311)
T ss_pred EEEEEECCccc-CceEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccCCCCc------ceeECCCCeEEEEEEcC
Confidence 35789999873 699999999999999999863 246788888763 4566431 23389999999999998
Q ss_pred CCCcceEEEEEeec--cCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccc
Q 011178 220 QPPQGYYIVISTRF--TSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGL 296 (491)
Q Consensus 220 ~~~g~~~i~~~~~~--~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 296 (491)
.+|.||..++... ..+. ....+.|.+.... ..+. .+.+..+. .-+|.+...... .
T Consensus 116 -~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~-----~~~~---~d~e~~l~---l~d~~~~~~~~~---~------- 173 (311)
T TIGR02376 116 -RPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPRE-----GLPE---YDKEYYIG---ESDLYTPKDEGE---G------- 173 (311)
T ss_pred -CCEEEEEEcCCCCchhHHhhcCcceEEEeeccC-----CCcC---cceeEEEe---eeeEeccccccc---c-------
Confidence 5899999887431 1121 1234455554321 1110 11110000 001111100000 0
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
..+..............+.|||+.+.. .| .+.++.|++++|.
T Consensus 174 ----~~~~~~~~~~~~~~~~~~~iNG~~~~~--~~--------------------------------~~~v~~G~~~RlR 215 (311)
T TIGR02376 174 ----GAYEDDVAAMRTLTPTHVVFNGAVGAL--TG--------------------------------DNALTAGVGERVL 215 (311)
T ss_pred ----ccccchHHHHhcCCCCEEEECCccCCC--CC--------------------------------CcccccCCcEEEE
Confidence 000000000000111357788875410 00 1246779999999
Q ss_pred EEcCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCC-ceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh-
Q 011178 377 FENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTI-SRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ- 453 (491)
Q Consensus 377 i~N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~-~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~- 453 (491)
|.|.+. ..+.||++|++|.++... |.+- ..+. ..||+.|.||+.+.|.|+++.||.|++|||...+.
T Consensus 216 iiNa~~~~~~~~~~~g~~~~~v~~D-G~~~---------~~~~~~~~~~~i~PG~R~dv~v~~~~pG~y~~~~~~~~~~~ 285 (311)
T TIGR02376 216 FVHSQPNRDSRPHLIGGHGDYVWVT-GKFA---------NPPNRDVETWFIPGGSAAAALYTFEQPGVYAYVDHNLIEAF 285 (311)
T ss_pred EEcCCCCCCCCCeEecCCceEEEEC-Cccc---------CCCCCCcceEEECCCceEEEEEEeCCCeEEEEECcHHHHHH
Confidence 999976 459999999999999994 4321 1122 36999999999999999999999999999999887
Q ss_pred hcceEEEEEEe
Q 011178 454 YLGQQFYLRVY 464 (491)
Q Consensus 454 d~GMm~~~~V~ 464 (491)
..||++.++|.
T Consensus 286 ~~g~~~~i~~~ 296 (311)
T TIGR02376 286 EKGAAAQVKVE 296 (311)
T ss_pred hCCCEEEEEEC
Confidence 77999999875
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.8e-12 Score=136.39 Aligned_cols=82 Identities=21% Similarity=0.360 Sum_probs=67.6
Q ss_pred EEEeeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCC---CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCc
Q 011178 14 LITHLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVY---GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGG 90 (491)
Q Consensus 14 l~v~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~---~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl 90 (491)
++.||+|+|+|.|.+..++.|||||+..... ..||.. .....|+||++++|+|++ +++|+||||||...|...||
T Consensus 503 v~~Gervri~l~N~t~~~HpmHlHG~~f~v~-~~~G~~~~~~dTv~V~Pg~t~~~~f~a-d~pG~w~~HCH~l~H~~~GM 580 (587)
T TIGR01480 503 FNYGERLRVVLVNDTMMAHPIHLHGMWSELE-DGQGEFQVRKHTVDVPPGGKRSFRVTA-DALGRWAYHCHMLLHMEAGM 580 (587)
T ss_pred ecCCCEEEEEEECCCCCCcceeEcCceeeee-cCCCcccccCCceeeCCCCEEEEEEEC-CCCeEEEEcCCCHHHHhCcC
Confidence 3345788899999999999999999975432 235632 223779999999999999 58999999999999999999
Q ss_pred eeEEEEe
Q 011178 91 YGGIKIA 97 (491)
Q Consensus 91 ~G~liV~ 97 (491)
++.+.|.
T Consensus 581 ~~~~~v~ 587 (587)
T TIGR01480 581 FREVTVR 587 (587)
T ss_pred cEEEEeC
Confidence 9999874
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-08 Score=108.63 Aligned_cols=233 Identities=15% Similarity=0.154 Sum_probs=142.9
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEE-EecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLV-EVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~vi-a~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|+++.|+++++++.|--.. ...+|.+|....-- ..||.+- +..-.|.||+.+...+++.+
T Consensus 23 ~~~~~NG~~P-GP~i~~~~GD~v~v~v~N~l~~-~tsiHwHGl~q~~~~~~DGv~~----vTq~pI~PG~s~~Y~f~~~~ 96 (539)
T TIGR03389 23 SILTVNGKFP-GPTLYAREGDTVIVNVTNNVQY-NVTIHWHGVRQLRNGWADGPAY----ITQCPIQPGQSYVYNFTITG 96 (539)
T ss_pred EEEEECCccc-CCEEEEEcCCEEEEEEEeCCCC-CeeEecCCCCCCCCCCCCCCcc----cccCCcCCCCeEEEEEEecC
Confidence 5799999974 7999999999999999999764 45556555432111 2577542 34556899999999999854
Q ss_pred CCcceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCC-CCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCCc
Q 011178 221 PPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGG-PTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYHY 294 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~-p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 294 (491)
.+|+||...+... +.....|-|...+... .+.|.. ...+. ||.......+.
T Consensus 97 ~~GT~WYHsH~~~--~~~Gl~G~lIV~~~~~---~~~~~~~~d~e~~l~l~Dw~~~~~~~~~------------------ 153 (539)
T TIGR03389 97 QRGTLWWHAHISW--LRATVYGAIVILPKPG---VPYPFPKPDREVPIILGEWWNADVEAVI------------------ 153 (539)
T ss_pred CCeeEEEecCchh--hhccceEEEEEcCCCC---CCCCCCCCCceEEEEecccccCCHHHHH------------------
Confidence 6899999887532 2122344444433221 111100 00010 11100000000
Q ss_pred cccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEE
Q 011178 295 GLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAE 374 (491)
Q Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 374 (491)
.. . +.... ...-...+.|||+..... .+. + ....+++++.|++++
T Consensus 154 -----~~-~-~~~~~-~~~~~d~~liNG~~~~~~----------------~~~-----~------~~~~~i~v~~G~~~R 198 (539)
T TIGR03389 154 -----NQ-A-NQTGG-APNVSDAYTINGHPGPLY----------------NCS-----S------KDTFKLTVEPGKTYL 198 (539)
T ss_pred -----HH-H-HhcCC-CCCccceEEECCCcCCCC----------------CCC-----C------CCceEEEECCCCEEE
Confidence 00 0 00000 000112367788753100 000 0 013458899999999
Q ss_pred EEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeeeecc
Q 011178 375 VVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIRSEN 449 (491)
Q Consensus 375 ~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~HCHi 449 (491)
|+|+|.+.. .+-|||+||.|.|++.. |.+ ..|...|++.|.+|+.+.|.++++. +|.|.++-+.
T Consensus 199 lRlINa~~~~~~~~~idgH~~~VIa~D-G~~----------~~P~~~~~l~i~~GqRydVlv~a~~~~g~y~i~~~~ 264 (539)
T TIGR03389 199 LRIINAALNDELFFAIANHTLTVVEVD-ATY----------TKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMAARP 264 (539)
T ss_pred EEEEeccCCceEEEEECCCeEEEEEeC-Ccc----------cCceEeCeEEecCCCEEEEEEECCCCCceEEEEEec
Confidence 999999754 48899999999999996 432 2466789999999999999999975 8998887554
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-09 Score=115.86 Aligned_cols=89 Identities=16% Similarity=0.116 Sum_probs=70.4
Q ss_pred EeecCCcEEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 365 MAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
+.++.|+++++.+.|.. ...|+||+||... .+. .|... ........|+||+..+++|+++++|.|
T Consensus 57 i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~--~~~---~~~DG---------~~~~tq~~i~pg~s~~y~f~~~~~Gt~ 122 (566)
T PLN02604 57 ILAQQGDTVIVELKNSLLTENVAIHWHGIRQ--IGT---PWFDG---------TEGVTQCPILPGETFTYEFVVDRPGTY 122 (566)
T ss_pred EEEECCCEEEEEEEeCCCCCCCCEEeCCCCC--CCC---ccccC---------CCccccCccCCCCeEEEEEEcCCCEEE
Confidence 67889999999999996 5689999999942 111 11000 011244578999999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEecCC
Q 011178 444 NIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
.||||...|.+.||+..+.|.+++
T Consensus 123 wyH~H~~~q~~~Gl~G~liV~~~~ 146 (566)
T PLN02604 123 LYHAHYGMQREAGLYGSIRVSLPR 146 (566)
T ss_pred EEeeCcHHHHhCCCeEEEEEEecC
Confidence 999999999999999999998654
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.8e-08 Score=102.59 Aligned_cols=218 Identities=16% Similarity=0.120 Sum_probs=133.5
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..++|||+.. .|+|++++|+++++++.|--.. ...+|.+|..+.- -..||.+. .+-.|.||+.+...|++.+
T Consensus 49 ~~~~~NG~~P-GP~I~~~~GD~v~v~v~N~L~~-~ttiHWHGl~~~~~~~~DGv~~-----tQ~pI~PG~sf~Y~F~~~~ 121 (539)
T PLN02835 49 QVILINGQFP-GPRLDVVTNDNIILNLINKLDQ-PFLLTWNGIKQRKNSWQDGVLG-----TNCPIPPNSNYTYKFQTKD 121 (539)
T ss_pred EEEEECCcCC-CCCEEEECCCEEEEEEEeCCCC-CCcEEeCCcccCCCCCCCCCcc-----CcCCCCCCCcEEEEEEECC
Confidence 4799999974 7999999999999999999754 4556666654332 23688543 2457999999999998754
Q ss_pred CCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCC-CCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 221 PPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPG-GPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~-~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
.+|+||...+.. .+. ....|.|....... .+.|. ....+. ||.......+...+.
T Consensus 122 q~GT~WYHsH~~--~q~~~Gl~G~lIV~~~~~---~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~------------- 183 (539)
T PLN02835 122 QIGTFTYFPSTL--FHKAAGGFGAINVYERPR---IPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLD------------- 183 (539)
T ss_pred CCEeEEEEeCcc--chhcCcccceeEEeCCCC---CCcCCCCCCceEEEEeeccccCCHHHHHHHhh-------------
Confidence 589999987743 221 12233333322110 01110 000010 111000000000000
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
... ...-.....|||+.. ..+.++.|+++
T Consensus 184 -------------~g~-~~~~~d~~liNG~~~-------------------------------------~~~~v~~G~~y 212 (539)
T PLN02835 184 -------------SGK-VLPFPDGVLINGQTQ-------------------------------------STFSGDQGKTY 212 (539)
T ss_pred -------------cCC-CCCCCceEEEccccC-------------------------------------ceEEECCCCEE
Confidence 000 000011244555421 12567899999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeee
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIR 446 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~H 446 (491)
+|+|+|.+.. ..-|||.||+|.|++..+ .+ ..|...|++.+.+|+.+.+.++++. +|.|-++
T Consensus 213 RlRliNa~~~~~~~f~i~gH~~~VI~~DG-~~----------v~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i~ 276 (539)
T PLN02835 213 MFRISNVGLSTSLNFRIQGHTMKLVEVEG-SH----------TIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIV 276 (539)
T ss_pred EEEEEEcCCCccEEEEECCCEEEEEEECC-cc----------CCCceeeEEEECcCceEEEEEEcCCCCCcEEEE
Confidence 9999999865 599999999999999953 22 2245679999999999999999864 6876665
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-07 Score=100.73 Aligned_cols=221 Identities=14% Similarity=0.150 Sum_probs=133.7
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEE---ecCccCCCCccCeEEEcCCceEEEEEEe
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVE---VEGTHTLQNTYDSLDIHLGQSYSVLVRA 218 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via---~DG~~~~p~~~~~l~l~pGeR~dv~v~~ 218 (491)
..++|||+.. .|+|++++|+++++++.|-... ...+| -|-+.+.. .||.+. .+-.|.||+.+...+++
T Consensus 36 ~~~~vNGq~P-GP~I~~~~GD~v~V~v~N~L~~-~ttiH--WHGl~q~~~~~~DGv~~-----tqcPI~PG~sftY~F~~ 106 (536)
T PLN02792 36 RGILINGQFP-GPEIRSLTNDNLVINVHNDLDE-PFLLS--WNGVHMRKNSYQDGVYG-----TTCPIPPGKNYTYDFQV 106 (536)
T ss_pred EEEEECCCCC-CCcEEEECCCEEEEEEEeCCCC-CcCEe--CCCcccCCCCccCCCCC-----CcCccCCCCcEEEEEEe
Confidence 4799999975 7999999999999999999753 44444 44444433 788533 23579999999999998
Q ss_pred CCCCcceEEEEEeeccCCCcceEEEE-EecCCCCCCCCCCCCCCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCC
Q 011178 219 DQPPQGYYIVISTRFTSQVLSATSVL-HYSNSAGSVSGPPPGGPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSY 292 (491)
Q Consensus 219 ~~~~g~~~i~~~~~~~~~~~~~~ail-~y~~~~~~~~~~~p~~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~ 292 (491)
++.+|+||...+.... ......|-| .+..... ..+.+. +..+. ||.......+.
T Consensus 107 ~~q~GT~WYHsH~~~q-~~~Gl~G~liI~~~~~~--~~p~~~-~d~e~~i~l~Dw~~~~~~~~~---------------- 166 (536)
T PLN02792 107 KDQVGSYFYFPSLAVQ-KAAGGYGSLRIYSLPRI--PVPFPE-PAGDFTFLIGDWYRRNHTTLK---------------- 166 (536)
T ss_pred CCCccceEEecCcchh-hhcccccceEEeCCccc--CcCCCc-ccceeEEEecccccCCHHHHH----------------
Confidence 6458999998875321 111233322 2221110 011110 00110 11100000000
Q ss_pred CccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcE
Q 011178 293 HYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372 (491)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 372 (491)
.. +..............|||+... ...+++++.|++
T Consensus 167 --------~~--~~~g~~~~~~~d~~liNG~~~~----------------------------------~~~~~~v~~Gk~ 202 (536)
T PLN02792 167 --------KI--LDGGRKLPLMPDGVMINGQGVS----------------------------------YVYSITVDKGKT 202 (536)
T ss_pred --------HH--hhccCcCCCCCCEEEEeccCCC----------------------------------CcceEEECCCCE
Confidence 00 0000000000123456665310 013467899999
Q ss_pred EEEEEEcCCCCC-CceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeee
Q 011178 373 AEVVFENPEDTL-QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIR 446 (491)
Q Consensus 373 v~~~i~N~~~~~-HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~H 446 (491)
++|+|+|.+... .-|+|.||.|.|++..+. + ..|...|++.|.+|+.+.|.++++. +|.|-+.
T Consensus 203 yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~-~----------v~p~~~~~l~i~~GqRydVlV~a~~~~g~Y~i~ 267 (536)
T PLN02792 203 YRFRISNVGLQTSLNFEILGHQLKLIEVEGT-H----------TVQSMYTSLDIHVGQTYSVLVTMDQPPQNYSIV 267 (536)
T ss_pred EEEEEEEcCCCceEEEEECCcEEEEEEeCCc-c----------CCCcceeEEEEccCceEEEEEEcCCCCceEEEE
Confidence 999999998654 899999999999999532 2 2345569999999999999999976 5776554
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.4e-07 Score=100.40 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=138.4
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..++|||+.. .|+|+++.|+++++++.|.... ...+|.+|....- -..||.+. .+-.|.||+.+...|++.+
T Consensus 47 ~~~~iNGq~P-GP~I~~~~GD~v~V~v~N~l~~-~ttiHWHGi~q~~~~~~DGv~~-----TQcpI~PG~sf~Y~F~~~~ 119 (552)
T PLN02354 47 QVILINGQFP-GPNINSTSNNNIVINVFNNLDE-PFLLTWSGIQQRKNSWQDGVPG-----TNCPIPPGTNFTYHFQPKD 119 (552)
T ss_pred EEEEECCCCc-CCcEEEeCCCEEEEEEEECCCC-CcccccccccCCCCcccCCCcC-----CcCCCCCCCcEEEEEEeCC
Confidence 4799999974 7999999999999999999753 4455555543322 23788542 3457999999999999854
Q ss_pred CCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCC-CCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 221 PPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPG-GPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~-~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
..|+||...+.. .|. ....|-|...+... .+.|- .+..+. ||.......+...+..
T Consensus 120 q~GT~WYHsH~~--~Q~~~Gl~G~lII~~~~~---~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~------------ 182 (552)
T PLN02354 120 QIGSYFYYPSTG--MHRAAGGFGGLRVNSRLL---IPVPYADPEDDYTVLIGDWYTKSHTALKKFLDS------------ 182 (552)
T ss_pred CCcceEEecCcc--ceecCCccceEEEcCCcC---CCCCCCCcCceEEEEeeeeccCCHHHHHHHHhc------------
Confidence 579999987642 221 12233333332210 01110 000010 1111000000000000
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
.. .........|||+.... + ......++++.|+++
T Consensus 183 ------------g~---~~~~~d~~liNG~~~~~----------------~--------------~~~~~~~~v~~Gk~y 217 (552)
T PLN02354 183 ------------GR---TLGRPDGVLINGKSGKG----------------D--------------GKDEPLFTMKPGKTY 217 (552)
T ss_pred ------------CC---CCCCCCeEEEeCCcCCC----------------C--------------CCCceEEEECCCCEE
Confidence 00 00001235566653210 0 001345789999999
Q ss_pred EEEEEcCCCCC-CceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeeeec
Q 011178 374 EVVFENPEDTL-QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIRSE 448 (491)
Q Consensus 374 ~~~i~N~~~~~-HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~HCH 448 (491)
+|+|+|.+... .-|||.||.|.|++..+ .+ ..|...|++.|.+|+...|.++++. +|.|-+.-.
T Consensus 218 RlRiINa~~~~~~~f~IdgH~~tVIa~DG-~~----------v~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~i~a~ 283 (552)
T PLN02354 218 RYRICNVGLKSSLNFRIQGHKMKLVEMEG-SH----------VLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVAS 283 (552)
T ss_pred EEEEEecCCCceEEEEECCceEEEEEeCC-cc----------cCCcceeEEEEccCceEEEEEECCCCCCcEEEEEe
Confidence 99999998654 89999999999999953 22 2344569999999999999999974 788777655
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-07 Score=100.09 Aligned_cols=219 Identities=15% Similarity=0.172 Sum_probs=134.7
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeE-EEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..++|||+.. .|+|+++.|+++++++.|.... ...+|.+|.... --..||.+. .+-.|.||+.+...+++++
T Consensus 48 ~~~~vNG~~P-GP~I~~~~GD~v~V~V~N~L~~-~ttiHWHGi~q~~~~~~DGv~~-----tQcpI~PG~sftY~F~~~~ 120 (543)
T PLN02991 48 QGILINGKFP-GPDIISVTNDNLIINVFNHLDE-PFLISWSGIRNWRNSYQDGVYG-----TTCPIPPGKNYTYALQVKD 120 (543)
T ss_pred EEEEEcCCCC-CCcEEEECCCEEEEEecCCCCC-CccEEECCcccCCCccccCCCC-----CCCccCCCCcEEEEEEeCC
Confidence 4799999974 7999999999999999999753 556666665432 234799632 2457999999999999964
Q ss_pred CCcceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCC-CCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCCc
Q 011178 221 PPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPG-GPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYHY 294 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~-~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 294 (491)
.+|+||..++.... ......|-|...+... .+.|. .+..+. ||.......+...+
T Consensus 121 q~GT~WYHsH~~~q-~~~Gl~G~lIV~~~~~---~~~p~~~~d~d~~i~l~DW~~~~~~~~~~~~--------------- 181 (543)
T PLN02991 121 QIGSFYYFPSLGFH-KAAGGFGAIRISSRPL---IPVPFPAPADDYTVLIGDWYKTNHKDLRAQL--------------- 181 (543)
T ss_pred CCcceEEecCcchh-hhCCCeeeEEEeCCcc---cCcccccccceeEEEecceecCCHHHHHHHh---------------
Confidence 58999998875321 1112344343332210 11111 000000 11110000000000
Q ss_pred cccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEE
Q 011178 295 GLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAE 374 (491)
Q Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 374 (491)
.... ...-.....|||+.. ...++++.|++++
T Consensus 182 -----------~~~~-~~~~~d~~liNG~~~------------------------------------~~~~~v~~G~~yR 213 (543)
T PLN02991 182 -----------DNGG-KLPLPDGILINGRGS------------------------------------GATLNIEPGKTYR 213 (543)
T ss_pred -----------hcCC-CCCCCCEEEEccCCC------------------------------------CceEEECCCCEEE
Confidence 0000 000011234555421 1236788999999
Q ss_pred EEEEcCCCCC-CceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cce-eee
Q 011178 375 VVFENPEDTL-QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGM-WNI 445 (491)
Q Consensus 375 ~~i~N~~~~~-HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~-w~~ 445 (491)
|+|+|.+... +-|+|.||.|.|++.. |.+ ..|...|++.|.+|+...|.++++. +|. |+.
T Consensus 214 lRiINa~~~~~~~~~idgH~~tVIa~D-G~~----------~~p~~~~~l~i~~GQRydvlv~a~~~~~~y~i~ 276 (543)
T PLN02991 214 LRISNVGLQNSLNFRIQNHTMKLVEVE-GTH----------TIQTPFSSLDVHVGQSYSVLITADQPAKDYYIV 276 (543)
T ss_pred EEEEeccCCeeEEEEECCCEEEEEEeC-Ccc----------ccceeeeEEEEcCCcEEEEEEECCCCCCcEEEE
Confidence 9999998654 8999999999999995 322 2355679999999999999999976 453 443
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.3e-07 Score=98.93 Aligned_cols=237 Identities=14% Similarity=0.127 Sum_probs=141.6
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEEEeC-
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD- 219 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v~~~- 219 (491)
..++|||+.. .|+|+++.|+++++++.|.-......+|.+|..+.- -..||.+. +.+-.|.||+.+...++++
T Consensus 28 ~~~~~NG~~P-GP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~----vTQcpI~PG~sf~Y~f~~~~ 102 (538)
T TIGR03390 28 YSVVVNGTSP-GPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPL----ASQWPIPPGHFFDYEIKPEP 102 (538)
T ss_pred EEEEECCcCC-CCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcc----cccCCCCCCCcEEEEEEecC
Confidence 4799999974 799999999999999999865445566776664322 23688764 2334588999999999875
Q ss_pred CCCcceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCCc
Q 011178 220 QPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYHY 294 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 294 (491)
..+|+||...+.. .+.....|.|...+... .+... ..+. ||.......+...+.
T Consensus 103 ~q~GT~WYHsH~~--~Q~~~l~G~lIV~~~~~---~~~~~--d~e~~l~l~Dw~~~~~~~~~~~~~-------------- 161 (538)
T TIGR03390 103 GDAGSYFYHSHVG--FQAVTAFGPLIVEDCEP---PPYKY--DDERILLVSDFFSATDEEIEQGLL-------------- 161 (538)
T ss_pred CCCeeeEEecCCc--hhhhcceeEEEEccCCc---cCCCc--cCcEEEEEeCCCCCCHHHHHhhhh--------------
Confidence 2579999987753 22222444444443210 01000 0010 111110000000000
Q ss_pred cccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEE
Q 011178 295 GLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAE 374 (491)
Q Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 374 (491)
..............|||+......... . + . ...| ....+.++.|++++
T Consensus 162 -----------~~~~~~~~~~d~~liNG~~~~~~~~~~-------~------~-----~--~~~~-~~~~~~v~~G~~yR 209 (538)
T TIGR03390 162 -----------STPFTWSGETEAVLLNGKSGNKSFYAQ-------I------N-----P--SGSC-MLPVIDVEPGKTYR 209 (538)
T ss_pred -----------ccCCccCCCCceEEECCcccccccccc-------c------c-----C--CCCC-cceEEEECCCCEEE
Confidence 000000001123567776421100000 0 0 0 0001 13468899999999
Q ss_pred EEEEcCCCCC-CceeccCCC-eEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc--------ceee
Q 011178 375 VVFENPEDTL-QSWHIDGHN-FFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV--------GMWN 444 (491)
Q Consensus 375 ~~i~N~~~~~-HP~HlHG~~-F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp--------G~w~ 444 (491)
|+|+|.+... .-|+|.||. |+|++..+. +..|...|++.|.+|+.+.|.++++.+ |.|-
T Consensus 210 lRlINa~~~~~~~~~idgH~~~~VIa~DG~-----------~~~P~~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ 278 (538)
T TIGR03390 210 LRFIGATALSLISLGIEDHENLTIIEADGS-----------YTKPAKIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYF 278 (538)
T ss_pred EEEEccCCceEEEEEECCCCeEEEEEeCCC-----------CCCceEeCeEEEccCCEEEEEEECCCccccccCCCCcEE
Confidence 9999998654 899999999 999999542 335677899999999999999999763 6665
Q ss_pred eee
Q 011178 445 IRS 447 (491)
Q Consensus 445 ~HC 447 (491)
+.-
T Consensus 279 ir~ 281 (538)
T TIGR03390 279 IQF 281 (538)
T ss_pred EEE
Confidence 543
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.7e-07 Score=97.92 Aligned_cols=219 Identities=13% Similarity=0.103 Sum_probs=130.9
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEE-EecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLV-EVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~vi-a~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..++|||+.. .|+|+++.|+++++++.|--.. ...+|.+|..+.-- ..||.+. .+-.|.||+++...+++++
T Consensus 46 ~~~~vNG~~P-GP~I~~~~GD~v~V~v~N~L~~-~ttiHWHGl~~~~~~~~DGv~g-----tQcpI~PG~sftY~F~~~~ 118 (545)
T PLN02168 46 QVIVINDMFP-GPLLNATANDVINVNIFNNLTE-PFLMTWNGLQLRKNSWQDGVRG-----TNCPILPGTNWTYRFQVKD 118 (545)
T ss_pred EEEEECCcCC-CCcEEEECCCEEEEEEEeCCCC-CccEeeCCccCCCCCCcCCCCC-----CcCCCCCCCcEEEEEEeCC
Confidence 4789999974 7999999999999999999864 55666666443211 2488642 3357999999999999964
Q ss_pred CCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCcccccc
Q 011178 221 PPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINT 299 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 299 (491)
.+|+||...+.. .|. ....|.|...+... ...+.+ .+..+....+. +|.... . . ..
T Consensus 119 q~GT~WYHsH~~--~Q~~~GL~G~lII~~~~~-~~~p~~-~~d~e~~l~l~-----Dw~~~~--~----~--------~~ 175 (545)
T PLN02168 119 QIGSYFYFPSLL--LQKAAGGYGAIRIYNPEL-VPVPFP-KPDEEYDILIG-----DWFYAD--H----T--------VM 175 (545)
T ss_pred CCceEEEecChh--hhhhCcceeEEEEcCCcc-cCcCcC-cccceeeEEEE-----ecCCCC--H----H--------HH
Confidence 589999987753 221 22334444433211 111111 01011110000 000000 0 0 00
Q ss_pred ceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEc
Q 011178 300 THTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFEN 379 (491)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N 379 (491)
.. .+.... .........|||+.- ....++++.|++++|+|.|
T Consensus 176 ~~--~~~~g~-~~~~~d~~liNG~~~-----------------------------------~~~~~~v~~G~~yRlRiiN 217 (545)
T PLN02168 176 RA--SLDNGH-SLPNPDGILFNGRGP-----------------------------------EETFFAFEPGKTYRLRISN 217 (545)
T ss_pred Hh--hhhcCC-CCCCCCEEEEeccCC-----------------------------------CcceEEeCCCCEEEEEEEe
Confidence 00 000000 000011244555421 0124678899999999999
Q ss_pred CCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC
Q 011178 380 PEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 439 (491)
Q Consensus 380 ~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn 439 (491)
.+.. .+-|+|.||+|.|++.. |. +..|...|++.|.+|+.+.+.+++++
T Consensus 218 a~~~~~~~~~IdgH~~tVIa~D-G~----------~v~p~~~~~l~i~~GqRydvlv~a~~ 267 (545)
T PLN02168 218 VGLKTCLNFRIQDHDMLLVETE-GT----------YVQKRVYSSLDIHVGQSYSVLVTAKT 267 (545)
T ss_pred ccCCceEEEEECCcEEEEEEEC-Ce----------ECCCceeeEEEEcCCceEEEEEEcCC
Confidence 9765 49999999999999985 32 22355679999999999999999964
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.4e-07 Score=96.15 Aligned_cols=231 Identities=15% Similarity=0.209 Sum_probs=137.6
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..++|||+.. .|+|+++.|+++++++.|-... ...+|.||..+.- --.||.+. .+-.|.||+.+...+++++
T Consensus 49 ~vi~vNGq~P-GPtI~~~~GD~v~V~V~N~L~~-~ttIHWHGl~q~~t~w~DGv~~-----TQcPI~PG~sftY~F~~~d 121 (596)
T PLN00044 49 EAIGINGQFP-GPALNVTTNWNLVVNVRNALDE-PLLLTWHGVQQRKSAWQDGVGG-----TNCAIPAGWNWTYQFQVKD 121 (596)
T ss_pred EEEEEcCcCC-CCcEEEECCCEEEEEEEeCCCC-CccEEECCccCCCCccccCCCC-----CcCCcCCCCcEEEEEEeCC
Confidence 4799999974 7999999999999999999764 5677777765432 24788532 4468999999999999964
Q ss_pred CCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCC-ccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 221 PPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPT-TQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~-~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
.+|+||...+.. .+. ....|-|...+... .+.+.+. +. .+. ||.......+...+...
T Consensus 122 q~GT~WYHsH~~--~Q~~~Gl~GalII~~~~~-~~~P~~~-~~~~e~~i~l~DW~~~~~~~~~~~l~~g----------- 186 (596)
T PLN00044 122 QVGSFFYAPSTA--LHRAAGGYGAITINNRDV-IPIPFGF-PDGGDITLFIADWYARDHRALRRALDAG----------- 186 (596)
T ss_pred CCceeEeeccch--hhhhCcCeeEEEEcCccc-ccccccC-CcccceEEEecccccCCHHHHHHHHhcC-----------
Confidence 589999988753 221 22344343333211 1111110 10 010 11110000000000000
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
. .........|||+.-.... ... . + ++ ....+++++.|+++
T Consensus 187 -------------~---~~~~~d~~lING~g~~~~n------------~~~----~---~-~~---~~~~~i~V~~Gk~y 227 (596)
T PLN00044 187 -------------D---LLGAPDGVLINAFGPYQYN------------DSL----V---P-PG---ITYERINVDPGKTY 227 (596)
T ss_pred -------------C---CCCCCCceEEcccCccccC------------Ccc----c---c-CC---CccceEEECCCCEE
Confidence 0 0000011234543210000 000 0 0 00 01236889999999
Q ss_pred EEEEEcCCCCC-CceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc-c--eee
Q 011178 374 EVVFENPEDTL-QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV-G--MWN 444 (491)
Q Consensus 374 ~~~i~N~~~~~-HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp-G--~w~ 444 (491)
+|+|+|.+... --|+|-||+|.|++.. |. +..|..-|++.|.+|+.+.+.++++.+ | .||
T Consensus 228 RlRiINaa~~~~~~fsIdgH~mtVIa~D-G~----------~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i 291 (596)
T PLN00044 228 RFRVHNVGVATSLNFRIQGHNLLLVEAE-GS----------YTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYV 291 (596)
T ss_pred EEEEEEccCCceEEEEECCCEEEEEEeC-Cc----------ccCceeeeeEEEcCCceEEEEEECCCCCCCceEE
Confidence 99999997544 7899999999999995 43 234667899999999999999999875 5 466
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-06 Score=93.96 Aligned_cols=250 Identities=15% Similarity=0.164 Sum_probs=141.4
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
-..+++||+.. .|+|+++.|+++++++.|........+|.+|....- -..||.+- +.+..|.||+++...++++
T Consensus 20 ~~~~~~Ng~~p-GP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~----vtq~~I~PG~s~~y~f~~~ 94 (541)
T TIGR03388 20 KLVIGINGQFP-GPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAG----VTQCAINPGETFIYNFVVD 94 (541)
T ss_pred eeEEEECCcCC-CCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCc----cccCCcCCCCEEEEEEEcC
Confidence 34799999974 799999999999999999975556788888874311 12577532 3456789999999999998
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
+ +|+||...+.. .+. ....+.|.+.+... ...+.. ...+. ||...........+.. . +
T Consensus 95 ~-~Gt~wyH~H~~--~q~~~Gl~G~liV~~~~~-~~~p~~--~d~e~~l~l~Dw~~~~~~~~~~~~~~---~--~----- 158 (541)
T TIGR03388 95 R-PGTYFYHGHYG--MQRSAGLYGSLIVDVPDG-EKEPFH--YDGEFNLLLSDWWHKSIHEQEVGLSS---K--P----- 158 (541)
T ss_pred C-CEEEEEEecch--HHhhccceEEEEEecCCC-CCCCcc--ccceEEEEeecccCCCHHHHHhhccc---C--C-----
Confidence 4 79999988753 221 12344444443211 011111 00010 1111000000000000 0 0
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeC-CCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIP-ADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~-~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 372 (491)
+. .........|||+.... ...... ... ..+.+. ..........+++++.|++
T Consensus 159 -----------~~----~~~~~d~~liNG~g~~~~~~~~~~-~~~--~~~~~~--------~~~~~~~~~~~~~v~~g~~ 212 (541)
T TIGR03388 159 -----------MR----WIGEPQSLLINGRGQFNCSLAAKF-SST--NLPQCN--------LKGNEQCAPQILHVEPGKT 212 (541)
T ss_pred -----------Cc----CCCCCcceEECCCCCCCCcccccc-Ccc--ccchhh--------ccCCCCCCceEEEECCCCE
Confidence 00 00001124566652110 000000 000 000000 0000000123578999999
Q ss_pred EEEEEEcCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cc-eeeeeec
Q 011178 373 AEVVFENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VG-MWNIRSE 448 (491)
Q Consensus 373 v~~~i~N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG-~w~~HCH 448 (491)
++|+|+|.+. ..+-|+|.||+|+|++..+. +..|..-|.+.|.+|+.+.|.++++. +| .|-++--
T Consensus 213 ~RlRliNa~~~~~~~~~id~h~~~VIa~DG~-----------~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~ 280 (541)
T TIGR03388 213 YRLRIASTTALAALNFAIEGHKLTVVEADGN-----------YVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVG 280 (541)
T ss_pred EEEEEEcccccceEEEEECCCEEEEEEeCCE-----------ecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEe
Confidence 9999999875 45999999999999999642 22466779999999999999999964 54 5655543
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.2e-08 Score=81.77 Aligned_cols=90 Identities=13% Similarity=0.022 Sum_probs=67.8
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VG 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG 441 (491)
.++.++.|+.|++.+.|....++.+|.||...---...+|... .. .-.|.||+..+.+|+++. +|
T Consensus 26 PtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-------~~-------~~~i~pG~~~~Y~~~~~~~~G 91 (117)
T PF07732_consen 26 PTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPPSPWMDGVPG-------VT-------QCPIAPGESFTYEFTANQQAG 91 (117)
T ss_dssp EEEEEETTEEEEEEEEEESSSGBSEEEETSBSTTGGGGSGGTT-------TS-------GSSBSTTEEEEEEEEESSCSE
T ss_pred CEEEEEcCCeeEEEEEeccccccccccceeeeeeeeecCCccc-------cc-------ceeEEeecceeeeEeeecccc
Confidence 4578899999999999998888999999975311000111100 00 123778999999999988 99
Q ss_pred eeeeeecchhhhhcceEEEEEEecC
Q 011178 442 MWNIRSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V~~~ 466 (491)
.|.||||...+..+||...+.|.++
T Consensus 92 t~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 92 TYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp EEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred ceeEeeCCCchhcCcCEEEEEEcCC
Confidence 9999999988878999999988754
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-06 Score=91.18 Aligned_cols=224 Identities=15% Similarity=0.158 Sum_probs=129.4
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 221 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~ 221 (491)
..+.+||+.. .|+|++++|+++++++.|.-.. ...+|.+|....- ..||..- ..|.||++++..+..++.
T Consensus 66 ~v~~~ng~~p-GPtir~~~Gd~v~v~v~N~L~~-~ttiHwHGl~~~~-~~~~g~~-------~~I~PG~~~~y~f~~~~~ 135 (471)
T PRK10883 66 SVWGINGRYL-GPTIRVWKGDDVKLIYSNRLTE-PVSMTVSGLQVPG-PLMGGPA-------RMMSPNADWAPVLPIRQN 135 (471)
T ss_pred eEEEECCccc-CCeEEEECCCEEEEEEEeCCCC-CCceeECCccCCC-CCCCCcc-------ccCCCCCeEEEEEecCCC
Confidence 4689999864 7999999999999999998754 4566776654321 1133321 238899999999988877
Q ss_pred CcceEEEEEeec--cCCCc-ceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCcccc
Q 011178 222 PQGYYIVISTRF--TSQVL-SATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLI 297 (491)
Q Consensus 222 ~g~~~i~~~~~~--~~~~~-~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~ 297 (491)
+|+||...+... ..+.. .-.|.+...... ....++|..=. .+....+. ++.+... +...+..
T Consensus 136 aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~-~~~~~~p~~~~~~d~~l~l~-----D~~~~~~-------g~~~~~~- 201 (471)
T PRK10883 136 AATCWYHANTPNRMAQHVYNGLAGMWLVEDEV-SKSLPIPNHYGVDDFPVIIQ-----DKRLDNF-------GTPEYNE- 201 (471)
T ss_pred ceeeEEccCCCCchhhhHhcCCeEEEEEeCCc-ccccCCcccCCCcceeEEee-----eeeeccC-------CCccccc-
Confidence 899999877431 11211 122333333221 01111111000 00000000 0000000 0000000
Q ss_pred ccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEE
Q 011178 298 NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVF 377 (491)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i 377 (491)
. .. . .. ......|||+.+ ..++++.+ +++|+|
T Consensus 202 ----~---~~-~-g~-~gd~~lvNG~~~-------------------------------------p~~~v~~~-~~RlRl 233 (471)
T PRK10883 202 ----P---GS-G-GF-VGDTLLVNGVQS-------------------------------------PYVEVSRG-WVRLRL 233 (471)
T ss_pred ----c---cc-C-Cc-cCCeeEECCccC-------------------------------------CeEEecCC-EEEEEE
Confidence 0 00 0 00 011244555432 12456654 789999
Q ss_pred EcCCCC-CCceec-cCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeee
Q 011178 378 ENPEDT-LQSWHI-DGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRS 447 (491)
Q Consensus 378 ~N~~~~-~HP~Hl-HG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HC 447 (491)
.|.+.. ..-|+| +||.|+|++..+|.. ..|...|.+.+.||+.+.|.++++..+.+.+++
T Consensus 234 iNas~~~~~~l~l~d~~~~~vIa~DGg~~----------~~P~~~~~l~l~pGeR~dvlVd~~~~~~~~l~~ 295 (471)
T PRK10883 234 LNASNARRYQLQMSDGRPLHVIAGDQGFL----------PAPVSVKQLSLAPGERREILVDMSNGDEVSITA 295 (471)
T ss_pred EEccCCceEEEEEcCCCeEEEEEeCCCcc----------cCCcEeCeEEECCCCeEEEEEECCCCceEEEEC
Confidence 999864 378888 899999999975532 345567999999999999999997777888876
|
|
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.1e-08 Score=87.50 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=64.5
Q ss_pred EEeeeEEEEEEecCCCCCeeeecccCCCCCCCCCCC-------------CC--CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 15 ITHLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGV-------------YG--TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 15 ~v~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~-------------~~--~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
+.++.+++.+.|....++.+|+||.....-...++. +. --..|.||+..+.+|++ +.+|.|.||
T Consensus 39 ~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~-~~~G~w~~H 117 (138)
T PF07731_consen 39 KNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRA-DNPGPWLFH 117 (138)
T ss_dssp ETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEE-TSTEEEEEE
T ss_pred eCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEe-ecceEEEEE
Confidence 345788999999999999999999965311111111 11 12448999999999999 599999999
Q ss_pred CCccccccCCceeEEEEec
Q 011178 80 PSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~ 98 (491)
||...+...||.+.+.|.+
T Consensus 118 CHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 118 CHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp ESSHHHHHTT-EEEEEECH
T ss_pred EchHHHHhCCCeEEEEEcC
Confidence 9999999999999999986
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.8e-06 Score=91.19 Aligned_cols=250 Identities=13% Similarity=0.146 Sum_probs=138.8
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
...++|||+.. .|+|+++.|+++++++.|.-......+|.+|....- -..||.+- +..-.|.||+.+...++++
T Consensus 42 ~~v~~vNg~~p-GP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~g----vtq~pI~PG~s~~Y~f~~~ 116 (574)
T PLN02191 42 GAVMTVNGQFP-GPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAG----VTQCAINPGETFTYKFTVE 116 (574)
T ss_pred eeEEEECCcCC-CCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCc----cccCCcCCCCeEEEEEECC
Confidence 35899999975 799999999999999999865445677777764321 12477543 2445699999999999998
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
.+|+||...+.. .+. ....|.|.......+. .+.. ...+. ||...........+... +.
T Consensus 117 -~~GT~wYHsH~~--~q~~~Gl~G~liV~~~~~~~-~~~~--~d~e~~l~l~Dw~~~~~~~~~~~~~~~---~~------ 181 (574)
T PLN02191 117 -KPGTHFYHGHYG--MQRSAGLYGSLIVDVAKGPK-ERLR--YDGEFNLLLSDWWHESIPSQELGLSSK---PM------ 181 (574)
T ss_pred -CCeEEEEeeCcH--HHHhCCCEEEEEEccCCCCC-CCCC--CCeeEEEeeeccccCChHHHHHhhccC---CC------
Confidence 479999988753 221 2234444443221111 0010 00111 11110000000000000 00
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
+ .........|||+.-..-........ ...+..+ . ...++ .+ ...+++++.|+++
T Consensus 182 -------~---------~~~~~d~~liNG~g~~~~~~~~~~~~--~~~~~~~-~----~~~n~-~~-~p~~~~v~~G~~y 236 (574)
T PLN02191 182 -------R---------WIGEAQSILINGRGQFNCSLAAQFSN--GTELPMC-T----FKEGD-QC-APQTLRVEPNKTY 236 (574)
T ss_pred -------C---------cCCCCCceEECCCCCCCCcccccccC--Ccccccc-e----eccCC-CC-CceEEEEcCCCEE
Confidence 0 00001123455542110000000000 0000000 0 00000 00 1236889999999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cc-eeeee
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VG-MWNIR 446 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG-~w~~H 446 (491)
+|+|+|.+.. .+-|+|.||+|.|++.. |. +..|..-|++.|.+|+...|.++++. +| .|-++
T Consensus 237 RlRiINa~~~~~~~~~idgH~~tVIa~D-G~----------~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ir 301 (574)
T PLN02191 237 RIRLASTTALASLNLAVQGHKLVVVEAD-GN----------YITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYIS 301 (574)
T ss_pred EEEEEecCCceeEEEEECCCeEEEEEcC-Ce----------eccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEE
Confidence 9999999754 48999999999999996 32 23467789999999999999999976 44 44433
|
|
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.4e-06 Score=90.51 Aligned_cols=227 Identities=18% Similarity=0.229 Sum_probs=131.9
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 221 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~ 221 (491)
..+.+||+.. .|+|++++|+++++++.|--.. ...+|.+|.... -+.||.+ ...|.||++++..+++++.
T Consensus 66 ~~~~yNg~~P-GPtIr~~~Gd~v~v~~~N~L~~-~ttiHwHGl~~~-~~~DG~p-------q~~I~PG~s~~Y~f~~~q~ 135 (523)
T PRK10965 66 ATWGYNGNLL-GPAVRLQRGKAVTVDITNQLPE-ETTLHWHGLEVP-GEVDGGP-------QGIIAPGGKRTVTFTVDQP 135 (523)
T ss_pred EEEEECCCCC-CceEEEECCCEEEEEEEECCCC-CccEEcccccCC-CccCCCC-------CCCCCCCCEEEEEeccCCC
Confidence 4799999864 7999999999999999998654 566777776533 2478864 2457899999999999877
Q ss_pred CcceEEEEEeec--cCCC-cceEEEEEecCCCCCCCCCCCCCC-CccccchhhhhhhhccCCCCCCCCCCCCCCCCcccc
Q 011178 222 PQGYYIVISTRF--TSQV-LSATSVLHYSNSAGSVSGPPPGGP-TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLI 297 (491)
Q Consensus 222 ~g~~~i~~~~~~--~~~~-~~~~ail~y~~~~~~~~~~~p~~p-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~ 297 (491)
+|+||...+... ..+. ....+.+.+..... ....+|..- ..++...+. ++.+.. .+...+..
T Consensus 136 aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~-~~~~lp~~~~~~d~~lvlq-----D~~~~~-------~g~~~~~~- 201 (523)
T PRK10965 136 AATCWFHPHQHGKTGRQVAMGLAGLVLIEDDES-LKLGLPKQWGVDDIPVILQ-----DKRFSA-------DGQIDYQL- 201 (523)
T ss_pred CceEEEecCCCCCcHHHHhCcCeEEEEEcCccc-cccCCcccCCCceeeEEEE-----eeeeCC-------CCceeccc-
Confidence 899999877521 1221 12334444443221 111122100 001100000 000000 00000000
Q ss_pred ccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEE
Q 011178 298 NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVF 377 (491)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i 377 (491)
.. ... ..... .....|||+.+ |. +.++ +++++|+|
T Consensus 202 ----~~-~~~-~~g~~-gd~~lVNG~~~-----p~--------------------------------~~v~-~~~~RlRl 236 (523)
T PRK10965 202 ----DV-MTA-AVGWF-GDTLLTNGAIY-----PQ--------------------------------HAAP-RGWLRLRL 236 (523)
T ss_pred ----cc-ccc-ccCcc-CCeEEECCccc-----ce--------------------------------eecC-CCEEEEEE
Confidence 00 000 00000 12355666542 11 2233 56899999
Q ss_pred EcCCCC-CCceec-cCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeee
Q 011178 378 ENPEDT-LQSWHI-DGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRS 447 (491)
Q Consensus 378 ~N~~~~-~HP~Hl-HG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HC 447 (491)
.|.+.. ..-+.+ .||.|+|++..++. +..|...|.+.|.||+.+.|.+++...|.+.+..
T Consensus 237 iNas~~r~~~l~~~dg~~~~vIa~DG~~----------l~~P~~v~~l~lapGeR~dvlv~~~~~~~~~l~~ 298 (523)
T PRK10965 237 LNGCNARSLNLATSDGRPLYVIASDGGL----------LAEPVKVSELPILMGERFEVLVDTSDGKAFDLVT 298 (523)
T ss_pred EeccCCceEEEEEcCCceEEEEEeCCCc----------ccCccEeCeEEECccceEEEEEEcCCCceEEEEE
Confidence 999743 233444 78999999996542 3346677999999999999999998778766654
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.7e-05 Score=81.43 Aligned_cols=228 Identities=18% Similarity=0.248 Sum_probs=139.6
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCcee-EEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKM-LLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~-~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..++|||+-. .|+|.++.|+++.++++|-.. ..+.++-+|... .---.||.++ .+=.|.|||.|--.+++++
T Consensus 48 ~vi~iNG~fP-GP~I~~~~gD~ivV~v~N~~~-~~~sihWhGv~q~kn~w~DG~~~-----TqCPI~Pg~~~tY~F~v~~ 120 (563)
T KOG1263|consen 48 QVITINGQFP-GPTINAEEGDTIVVNVVNRLD-EPFSIHWHGVRQRKNPWQDGVYI-----TQCPIQPGENFTYRFTVKD 120 (563)
T ss_pred eeEeecCCCC-CCeEEEEeCCEEEEEEEeCCC-CceEEEeccccccCCccccCCcc-----ccCCcCCCCeEEEEEEeCC
Confidence 4699999975 799999999999999999955 566777777532 2233488443 5556899999999999996
Q ss_pred CCcceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccc-----cchhh-hhhhhccCCCCCCCCCCCCCCCCc
Q 011178 221 PPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWSLE-QARSLRRNLTASGPRPNPQGSYHY 294 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~ 294 (491)
..|+||..++..+-.. ....|-|....... .+-+.+ .|..+. +|-.+ ..+.+...+......|.
T Consensus 121 q~GT~~yh~h~~~~Ra-~G~~G~liI~~~~~-~p~pf~-~pd~E~~ill~dW~~~~~~~~l~~~~~~~~~~p~------- 190 (563)
T KOG1263|consen 121 QIGTLWYHSHVSWQRA-TGVFGALIINPRPG-LPVPFP-KPDKEFTILLGDWYKNLNHKNLKNFLDRTGALPN------- 190 (563)
T ss_pred cceeEEEeeccccccc-cCceeEEEEcCCcc-CCCCCC-CCCceeEEEeEeeccccCHHHHHHhhccCCCCCC-------
Confidence 6899998887653211 12444444432221 001111 111111 11110 00111100000000000
Q ss_pred cccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEE
Q 011178 295 GLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAE 374 (491)
Q Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 374 (491)
..-...|||++ +..+.|...+++..|+++.
T Consensus 191 -------------------~~D~~~iNg~~-------------------------------g~~~~~~~~l~v~pGktY~ 220 (563)
T KOG1263|consen 191 -------------------PSDGVLINGRS-------------------------------GFLYNCTPTLTVEPGKTYR 220 (563)
T ss_pred -------------------CCCceEECCCC-------------------------------CcccCceeEEEEcCCCEEE
Confidence 00113344443 1222346678899999999
Q ss_pred EEEEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cc-eeeeeec
Q 011178 375 VVFENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VG-MWNIRSE 448 (491)
Q Consensus 375 ~~i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG-~w~~HCH 448 (491)
|+|.|.+- ..+ |.|-+|.+.||+.. |. ...|.--|++.|.+|+...+...||. ++ -|+-=|=
T Consensus 221 lRiiN~g~~~~l~-F~I~~H~ltvVe~D-g~----------y~~p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~ 286 (563)
T KOG1263|consen 221 LRIINAGLNTSLN-FSIANHQLTVVEVD-GA----------YTKPFTTDSLDIHPGQTYSVLLTADQSPGDYYIAASP 286 (563)
T ss_pred EEEEccccccceE-EEECCeEEEEEEec-ce----------EEeeeeeceEEEcCCcEEEEEEeCCCCCCcEEEEEEe
Confidence 99999874 335 99999999999985 43 23355669999999999999999975 45 3555444
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.2e-06 Score=86.06 Aligned_cols=222 Identities=14% Similarity=0.013 Sum_probs=135.9
Q ss_pred CCcccCCCCeEEEe-----------eeEEEEEEecC-CCCCeeeecccCCCCCCCCCCCC----C-CCCCCCCCCeEEEE
Q 011178 4 MNHFSSLGCSLITH-----------LYTHLVVLNFI-YMAPLITLNGVQQRRNSWQDGVY----G-TNCPIPPGKNFTYV 66 (491)
Q Consensus 4 ~~~~~~~G~~l~v~-----------d~v~i~~~N~l-~~~~siH~HG~~~~~~~~~DG~~----~-~q~~i~PG~~~~Y~ 66 (491)
......+||++.|+ ..+++|+.|.- .....+++.|..... -..||.+ . .+..+.|||.++..
T Consensus 182 ~~~~~~~g~~~~vnG~~~p~~~~~~g~~rlRl~n~~~~~~~~~~~~~~~~~V-i~~DG~~v~~~~~d~~~l~p~er~~v~ 260 (451)
T COG2132 182 PAMGGFPGDTLLVNGAILPFKAVPGGVVRLRLLNAGNARTYHLALGGGPLTV-IAVDGGPLPPVSVDELYLAPGERYEVL 260 (451)
T ss_pred ccccCCCCCeEEECCCccceeecCCCeEEEEEEecCCceEEEEEecCceEEE-EEeCCcCcCceeeeeEEecCcceEEEE
Confidence 34467888886653 24899999997 455666666544321 1256654 2 45668999999999
Q ss_pred EEeCCCccceeEeCCccccccCCceeEEEEecCCCCCC-CC------CCCC---CcceEEeeecccCCHHHHHHHHhcCC
Q 011178 67 LQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPV-PF------DPPA---GDFTILAGDWYKKNHTDLKAILDSGS 136 (491)
Q Consensus 67 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~-~~------~~~~---~e~~l~l~d~~~~~~~~~~~~~~~~~ 136 (491)
.+.. ..|++-|.|.. .+..+-+.+..-......... .+ ..++ ......+.....+......... .-.
T Consensus 261 v~~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 337 (451)
T COG2132 261 VDMN-DGGAVTLTALG-EDMPDTLKGFRAPNPILTPSYPVLNGRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDF-HLI 337 (451)
T ss_pred EEcC-CCCeEEEEecc-ccCCceeeeeeccccccccccccccccccCCCcchhhccccccchhhcCCCcccccccc-hhh
Confidence 8885 47888888876 222232333322222110000 00 0011 1111111111111110000000 000
Q ss_pred CCCCCceEEEcCcCCC--cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC---CCCccCeEEEcCCce
Q 011178 137 DLPFPDGLVINGRGSN--ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT---LQNTYDSLDIHLGQS 211 (491)
Q Consensus 137 ~~~~~~~~~vNG~~~~--~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~---~p~~~~~l~l~pGeR 211 (491)
.......+.+||+.+. ...+.++.|+++||+|.|-+. ..+.||++|+.|.|++.| ... .+...|++.+.+|+|
T Consensus 338 ~~~~~~~~~~n~~~~~~~~~~~~~~~G~~~~~~i~n~~~-~~HP~HlHg~~F~v~~~~-~~~~~~~~~~kDTv~v~~~~~ 415 (451)
T COG2132 338 GGIGGYVWAINGKAFDDNRVTLIAKAGTRERWVLTNDTP-MPHPFHLHGHFFQVLSGD-APAPGAAPGWKDTVLVAPGER 415 (451)
T ss_pred cccccccccccCccCCCCcCceeecCCCEEEEEEECCCC-CccCeEEcCceEEEEecC-CCcccccCccceEEEeCCCeE
Confidence 0112345888998864 467899999999999999998 689999999999999999 322 335569999999999
Q ss_pred EEEEEEeCCCCcceEEEEEee
Q 011178 212 YSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 212 ~dv~v~~~~~~g~~~i~~~~~ 232 (491)
..+.++++ .+|.|.+.++..
T Consensus 416 ~~v~~~a~-~~g~~~~HCH~l 435 (451)
T COG2132 416 LLVRFDAD-YPGPWMFHCHIL 435 (451)
T ss_pred EEEEEeCC-CCCceEEeccch
Confidence 99999999 678888877654
|
|
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.5e-06 Score=74.15 Aligned_cols=92 Identities=20% Similarity=0.230 Sum_probs=76.4
Q ss_pred eeEEeecCCcEEEEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-
Q 011178 362 TSVMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN- 439 (491)
Q Consensus 362 ~~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn- 439 (491)
..++.++.|++++|+|.|.+.. .+.|++.||+|+|++.. |. ...|...|++.|.+|+.+.|.++++.
T Consensus 59 ~~~~~v~~g~~~rlRliNa~~~~~~~~~i~gh~~~Via~D-G~----------~v~p~~~~~l~l~~G~R~dvlv~~~~~ 127 (159)
T PF00394_consen 59 PPVIKVKPGERYRLRLINAGASTSFNFSIDGHPMTVIAAD-GV----------PVEPYKVDTLVLAPGQRYDVLVTADQP 127 (159)
T ss_dssp SGEEEEETTTEEEEEEEEESSS-BEEEEETTBCEEEEEET-TE----------EEEEEEESBEEE-TTEEEEEEEEECSC
T ss_pred cceEEEcCCcEEEEEEEeccCCeeEEEEeeccceeEeeec-cc----------cccccccceEEeeCCeEEEEEEEeCCC
Confidence 3467899999999999998865 59999999999999995 32 22277889999999999999999987
Q ss_pred cceeeeee----cchhhhhcceEEEEEEe
Q 011178 440 VGMWNIRS----ENWARQYLGQQFYLRVY 464 (491)
Q Consensus 440 pG~w~~HC----Hil~H~d~GMm~~~~V~ 464 (491)
+|.|.++| +...+...|+...+.+.
T Consensus 128 ~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y 156 (159)
T PF00394_consen 128 PGNYWIRASYQHDSINDPQNGNALAILRY 156 (159)
T ss_dssp SSEEEEEEEESSSSSHSHGGGTTEEEEEE
T ss_pred CCeEEEEEecccCCCccCCCcEEEEEEEE
Confidence 99999999 55677888888777654
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.3e-06 Score=71.82 Aligned_cols=57 Identities=19% Similarity=0.227 Sum_probs=41.8
Q ss_pred CeEEE--eeeEEEEEEecCCCCC--eeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 12 CSLIT--HLYTHLVVLNFIYMAP--LITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N~l~~~~--siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
+.|+| ||+|+++++|.-+.++ .+++||+ +..|+||++.+|+|++ +++|+|||||-.+
T Consensus 61 ~~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi--------------s~~I~pGet~TitF~a-dKpG~Y~y~C~~H 121 (135)
T TIGR03096 61 EALVVKKGTPVKVTVENKSPISEGFSIDAYGI--------------SEVIKAGETKTISFKA-DKAGAFTIWCQLH 121 (135)
T ss_pred CEEEECCCCEEEEEEEeCCCCccceEECCCCc--------------ceEECCCCeEEEEEEC-CCCEEEEEeCCCC
Confidence 44444 4777888999876543 3443332 2348999999999999 6999999999766
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.9e-05 Score=69.30 Aligned_cols=87 Identities=10% Similarity=-0.045 Sum_probs=57.6
Q ss_pred EEeecCCcEEEEEEEcCCC-CCCceeccCCCe--EEEeeccCCCCCCCCCCcccCCCCceeeEEeCC---C--CEEEEEE
Q 011178 364 VMAADFRGFAEVVFENPED-TLQSWHIDGHNF--FAVGMDGGEWTPASRLTYNLRDTISRCTVQVYP---K--SWTAVYV 435 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F--~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p---~--~~~~irf 435 (491)
.+.++.|+.|++.+.|.+. ..|.|-||.+.- ......+|. +..-..-.+++ + ++..+.|
T Consensus 53 ~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~-------------~~~~~~~i~p~~~~g~~~~~~~tf 119 (148)
T TIGR03095 53 TIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGL-------------GFVAGTGFLPPPKSGKFGYTDFTY 119 (148)
T ss_pred EEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCC-------------CccccCcccCCCCCCccceeEEEE
Confidence 4778999999999999865 557666653221 110000110 11111112222 2 2468899
Q ss_pred EccCcceeeeeecchhhhhcceEEEEEE
Q 011178 436 PLDNVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 436 ~adnpG~w~~HCHil~H~d~GMm~~~~V 463 (491)
+++.+|.+.||||+..|...||-..+.|
T Consensus 120 ~f~~aGtywyhC~~pgH~~~GM~G~iiV 147 (148)
T TIGR03095 120 HFSTAGTYWYLCTYPGHAENGMYGKIVV 147 (148)
T ss_pred ECCCCeEEEEEcCChhHHHCCCEEEEEE
Confidence 9999999999999999999999999987
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.92 E-value=4.1e-05 Score=62.64 Aligned_cols=70 Identities=14% Similarity=0.166 Sum_probs=45.0
Q ss_pred EEEecCCCCCeeeecccCCCC-CCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRR-NSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~-~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|.-..++++.++...... .....+... +...+.||+++++.|+. +|+|.|+|- .+...||.|.|+|+
T Consensus 28 ~~~N~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~t~~~tF~~---~G~y~y~C~--~H~~aGM~G~I~V~ 99 (99)
T TIGR02656 28 EWVNNKGGPHNVVFDEDAVPAGVKELAKSLSHKDLLNSPGESYEVTFST---PGTYTFYCE--PHRGAGMVGKITVE 99 (99)
T ss_pred EEEECCCCCceEEECCCCCccchhhhcccccccccccCCCCEEEEEeCC---CEEEEEEcC--CccccCCEEEEEEC
Confidence 466876677777766432110 000011111 22347899999998864 999999997 55677999999985
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00012 Score=59.89 Aligned_cols=82 Identities=16% Similarity=0.060 Sum_probs=58.7
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|+|+ |.+...|-+.++...+..-.. ........+++.+.||+...+.|.. ||.
T Consensus 17 ~~i~v~~G~~V~~~--N~~~~~H~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~pG~t~~~tF~~--~G~ 79 (99)
T TIGR02656 17 AKISIAAGDTVEWV--NNKGGPHNVVFDEDAVPAGVK-------------ELAKSLSHKDLLNSPGESYEVTFST--PGT 79 (99)
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEECCCCCccchh-------------hhcccccccccccCCCCEEEEEeCC--CEE
Confidence 35788999999887 666677888776432211100 0001123477888999999887776 999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||- .|...||...+.|
T Consensus 80 y~y~C~--~H~~aGM~G~I~V 98 (99)
T TIGR02656 80 YTFYCE--PHRGAGMVGKITV 98 (99)
T ss_pred EEEEcC--CccccCCEEEEEE
Confidence 999998 6999999999987
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00027 Score=59.81 Aligned_cols=66 Identities=18% Similarity=0.307 Sum_probs=45.8
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 96 (491)
||+ |+++|.-..++++.+.|.. +...+...+.||++++|.|+. +|+|-|+|= .+...||.|.|+|
T Consensus 54 Gd~--V~~~N~~~~~H~v~~~~~~--------~~~~~~~~~~pg~t~~~tF~~---~G~y~y~C~--~H~~~gM~G~I~V 118 (119)
T PRK02710 54 GDT--VKWVNNKLAPHNAVFDGAK--------ELSHKDLAFAPGESWEETFSE---AGTYTYYCE--PHRGAGMVGKITV 118 (119)
T ss_pred CCE--EEEEECCCCCceEEecCCc--------cccccccccCCCCEEEEEecC---CEEEEEEcC--CCccCCcEEEEEE
Confidence 454 3467876677887765431 111122337899999998874 899999997 3455799999998
Q ss_pred e
Q 011178 97 A 97 (491)
Q Consensus 97 ~ 97 (491)
+
T Consensus 119 ~ 119 (119)
T PRK02710 119 E 119 (119)
T ss_pred C
Confidence 4
|
|
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00049 Score=58.71 Aligned_cols=59 Identities=14% Similarity=0.152 Sum_probs=50.0
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|+|.+.|.+..+|.+-++++. -...++||+..+|+|.++.||.|
T Consensus 62 ~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~g---------------------------is~~I~pGet~TitF~adKpG~Y 114 (135)
T TIGR03096 62 ALVVKKGTPVKVTVENKSPISEGFSIDAYG---------------------------ISEVIKAGETKTISFKADKAGAF 114 (135)
T ss_pred EEEECCCCEEEEEEEeCCCCccceEECCCC---------------------------cceEECCCCeEEEEEECCCCEEE
Confidence 478999999999999999888887776541 13457789999999999999999
Q ss_pred eeeecc
Q 011178 444 NIRSEN 449 (491)
Q Consensus 444 ~~HCHi 449 (491)
.|||-.
T Consensus 115 ~y~C~~ 120 (135)
T TIGR03096 115 TIWCQL 120 (135)
T ss_pred EEeCCC
Confidence 999988
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00055 Score=53.96 Aligned_cols=61 Identities=10% Similarity=0.024 Sum_probs=40.5
Q ss_pred EEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 24 ~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++|.-..++++++..-.-.. .+ .....+.||++|++.| +++|+|-|||=.+. +|.|-++|+
T Consensus 23 ~~N~d~~~Hnv~~~~g~~~~---~~---~~~~~~~~g~~~~~tf---~~~G~y~y~C~~Hp----~M~G~v~V~ 83 (83)
T TIGR02657 23 WINREAMPHNVHFVAGVLGE---AA---LKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP----FMRGKVVVE 83 (83)
T ss_pred EEECCCCCccEEecCCCCcc---cc---ccccccCCCCEEEEEC---CCCEEEEEEcCCCC----CCeEEEEEC
Confidence 67886678888875432100 00 0112257888888777 36999999997663 599999985
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00046 Score=56.42 Aligned_cols=37 Identities=27% Similarity=0.590 Sum_probs=32.1
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.+.||+++++.|+ ++|+|.|+|- - +...||.|.|+|+
T Consensus 63 ~~~~G~~~~~tF~---~~G~y~y~C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 63 LLAPGETYSVTFT---KPGTYEYYCT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp EBSTTEEEEEEEE---SSEEEEEEET-T-TGGTTSEEEEEEE
T ss_pred ecCCCCEEEEEeC---CCeEEEEEcC-C-CcccCCEEEEEEC
Confidence 3789999999998 6999999997 3 6778999999996
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0004 Score=57.29 Aligned_cols=63 Identities=14% Similarity=0.138 Sum_probs=37.5
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 96 (491)
|+.|+|+++|.-...+.+..-++.. ...|.||++.+++|+. .++|+|=|+|-.+. . |.|-|||
T Consensus 42 G~~v~l~~~N~~~~~h~~~i~~~~~------------~~~l~~g~~~~~~f~~-~~~G~y~~~C~~~~---~-m~G~liV 104 (104)
T PF13473_consen 42 GQPVTLTFTNNDSRPHEFVIPDLGI------------SKVLPPGETATVTFTP-LKPGEYEFYCTMHP---N-MKGTLIV 104 (104)
T ss_dssp TCEEEEEEEE-SSS-EEEEEGGGTE------------EEEE-TT-EEEEEEEE--S-EEEEEB-SSS----T-TB-----
T ss_pred CCeEEEEEEECCCCcEEEEECCCce------------EEEECCCCEEEEEEcC-CCCEEEEEEcCCCC---c-ceecccC
Confidence 4678899999977765555555321 1348999999999987 68999999999765 3 7787776
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00074 Score=71.64 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=49.7
Q ss_pred EeeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc-ccccCCceeEE
Q 011178 16 THLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-FHKAAGGYGGI 94 (491)
Q Consensus 16 v~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~Gl~G~l 94 (491)
.||.|.++++|.-...-.+ ||+.+.+. |+ ..-+.||++-+..|++ +++|+|||||..- .....+|.|-|
T Consensus 561 ~GDeVt~~lTN~d~~~DVi--HGF~Ip~~----nI---~~dv~PG~t~svtF~a-dkPGvy~~~CtefCGa~H~~M~G~~ 630 (635)
T PRK02888 561 QGDEVTVIVTNLDKVEDLT--HGFAIPNY----GV---NMEVAPQATASVTFTA-DKPGVYWYYCTWFCHALHMEMRGRM 630 (635)
T ss_pred CCCEEEEEEEeCCcccccc--cceeeccc----Cc---cEEEcCCceEEEEEEc-CCCEEEEEECCcccccCcccceEEE
Confidence 3567788899942211122 66654321 11 1237899999999999 6999999999852 12224899999
Q ss_pred EEecC
Q 011178 95 KIASR 99 (491)
Q Consensus 95 iV~~~ 99 (491)
+|+++
T Consensus 631 iVep~ 635 (635)
T PRK02888 631 LVEPK 635 (635)
T ss_pred EEEeC
Confidence 99863
|
|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0021 Score=53.04 Aligned_cols=68 Identities=12% Similarity=0.051 Sum_probs=44.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..++++.|+.+.+++.|.+...|-|.+-+. +.+ ..+++|+..++.|.++.||.
T Consensus 35 ~~i~v~~G~~v~l~~~N~~~~~h~~~i~~~--------------------------~~~-~~l~~g~~~~~~f~~~~~G~ 87 (104)
T PF13473_consen 35 STITVKAGQPVTLTFTNNDSRPHEFVIPDL--------------------------GIS-KVLPPGETATVTFTPLKPGE 87 (104)
T ss_dssp -EEEEETTCEEEEEEEE-SSS-EEEEEGGG--------------------------TEE-EEE-TT-EEEEEEEE-S-EE
T ss_pred CEEEEcCCCeEEEEEEECCCCcEEEEECCC--------------------------ceE-EEECCCCEEEEEEcCCCCEE
Confidence 347889999999999999877666655431 123 77889999999999999999
Q ss_pred eeeeecchhhhhcceEEEE
Q 011178 443 WNIRSENWARQYLGQQFYL 461 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~ 461 (491)
|-|+|-+ |.. |-..+
T Consensus 88 y~~~C~~--~~~--m~G~l 102 (104)
T PF13473_consen 88 YEFYCTM--HPN--MKGTL 102 (104)
T ss_dssp EEEB-SS--S-T--TB---
T ss_pred EEEEcCC--CCc--ceecc
Confidence 9999997 554 44444
|
|
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0042 Score=52.68 Aligned_cols=73 Identities=18% Similarity=0.184 Sum_probs=48.0
Q ss_pred cccCCCCeEEEeeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcccc
Q 011178 6 HFSSLGCSLITHLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFH 85 (491)
Q Consensus 6 ~~~~~G~~l~v~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 85 (491)
+.+.+||||+ +.|.-...++++.=+.. .+ +|.- .....+|++|++.|+ .+|+|-|.|-.|
T Consensus 56 v~v~pGDTVt--------w~~~d~~~Hnv~~~~~~---~~--~g~~--~~~~~~~~s~~~Tfe---~~G~Y~Y~C~PH-- 115 (128)
T COG3794 56 VTVKPGDTVT--------WVNTDSVGHNVTAVGGM---DP--EGSG--TLKAGINESFTHTFE---TPGEYTYYCTPH-- 115 (128)
T ss_pred EEECCCCEEE--------EEECCCCCceEEEeCCC---Cc--cccc--ccccCCCcceEEEec---ccceEEEEeccC--
Confidence 3456777774 78886668888766553 11 2221 122334567766664 599999998654
Q ss_pred ccCCceeEEEEec
Q 011178 86 KAAGGYGGIKIAS 98 (491)
Q Consensus 86 ~~~Gl~G~liV~~ 98 (491)
...||.|.|+|++
T Consensus 116 ~~~gM~G~IvV~~ 128 (128)
T COG3794 116 PGMGMKGKIVVGE 128 (128)
T ss_pred CCCCcEEEEEeCC
Confidence 5579999999974
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0087 Score=50.18 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=29.2
Q ss_pred CCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecCC
Q 011178 58 PPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 58 ~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 100 (491)
.+|+++++.| +++|+|=|+|= .+...||.|.|+|.+++
T Consensus 53 ~~g~~~~~tF---~~~G~Y~Y~C~--pH~~~GM~G~V~Vg~~~ 90 (116)
T TIGR02375 53 KINEEYTVTV---TEEGVYGVKCT--PHYGMGMVALIQVGDPP 90 (116)
T ss_pred CCCCEEEEEe---CCCEEEEEEcC--CCccCCCEEEEEECCCC
Confidence 3566666666 36999999997 34668999999998853
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0099 Score=48.47 Aligned_cols=82 Identities=10% Similarity=-0.041 Sum_probs=55.2
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCC-CCCCcccCCCCceeeEEeCCCCEEEEEEEccCcc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPA-SRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~-~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG 441 (491)
..+.++.|++|.|+.. +...|.+.+ .. +.+... ...... ..-.+..+.+|+...+.|. .+|
T Consensus 17 ~~i~V~~G~tV~~~n~--~~~~Hnv~~-------~~---~~~~~~~~~~~~~----~~~~~~~~~~G~~~~~tF~--~~G 78 (99)
T PF00127_consen 17 SEITVKAGDTVTFVNN--DSMPHNVVF-------VA---DGMPAGADSDYVP----PGDSSPLLAPGETYSVTFT--KPG 78 (99)
T ss_dssp SEEEEETTEEEEEEEE--SSSSBEEEE-------ET---TSSHTTGGHCHHS----TTCEEEEBSTTEEEEEEEE--SSE
T ss_pred CEEEECCCCEEEEEEC--CCCCceEEE-------ec---ccccccccccccC----ccccceecCCCCEEEEEeC--CCe
Confidence 3478899999988766 455677655 11 111100 000000 1116677888998888877 899
Q ss_pred eeeeeecchhhhhcceEEEEEEe
Q 011178 442 MWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|.|+|- - |...||-..+.|.
T Consensus 79 ~y~y~C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 79 TYEYYCT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp EEEEEET-T-TGGTTSEEEEEEE
T ss_pred EEEEEcC-C-CcccCCEEEEEEC
Confidence 9999999 4 9999999999873
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.011 Score=62.94 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=56.3
Q ss_pred EEeecCCcEEEEEEEcCC---CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc
Q 011178 364 VMAADFRGFAEVVFENPE---DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV 440 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp 440 (491)
.+.++.|+.|.+++.|.+ +..|-|-|-++. --+.+.||....+.|+++.|
T Consensus 556 ~i~Vk~GDeVt~~lTN~d~~~DViHGF~Ip~~n---------------------------I~~dv~PG~t~svtF~adkP 608 (635)
T PRK02888 556 EFTVKQGDEVTVIVTNLDKVEDLTHGFAIPNYG---------------------------VNMEVAPQATASVTFTADKP 608 (635)
T ss_pred eEEecCCCEEEEEEEeCCcccccccceeecccC---------------------------ccEEEcCCceEEEEEEcCCC
Confidence 467899999999999974 355776663331 11356689999999999999
Q ss_pred ceeeeeecchhhh-hcceEEEEEEe
Q 011178 441 GMWNIRSENWARQ-YLGQQFYLRVY 464 (491)
Q Consensus 441 G~w~~HCHil~H~-d~GMm~~~~V~ 464 (491)
|+|.+||...-|. |.+|...+.|.
T Consensus 609 Gvy~~~CtefCGa~H~~M~G~~iVe 633 (635)
T PRK02888 609 GVYWYYCTWFCHALHMEMRGRMLVE 633 (635)
T ss_pred EEEEEECCcccccCcccceEEEEEE
Confidence 9999999985443 45888888775
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.021 Score=47.73 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=29.9
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
..||++|+|.|. ++|+|=|+|=.| ...||.|.|+|+
T Consensus 80 ~~~G~t~s~Tf~---~~G~Y~Y~C~pH--~~~gM~G~I~V~ 115 (115)
T TIGR03102 80 SEEGTTYEHTFE---EPGIYLYVCVPH--EALGMKGAVVVE 115 (115)
T ss_pred cCCCCEEEEEec---CCcEEEEEccCC--CCCCCEEEEEEC
Confidence 578999999994 699999999754 456899999985
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.018 Score=48.62 Aligned_cols=70 Identities=14% Similarity=0.078 Sum_probs=50.6
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~ 444 (491)
++++.|++|+|+ |.+..+|.+.+.+.. .+. ..| ..+.+|+...+.|.. ||.+.
T Consensus 49 i~v~~Gd~V~~~--N~~~~~H~v~~~~~~---------~~~-------------~~~-~~~~pg~t~~~tF~~--~G~y~ 101 (119)
T PRK02710 49 LTIKAGDTVKWV--NNKLAPHNAVFDGAK---------ELS-------------HKD-LAFAPGESWEETFSE--AGTYT 101 (119)
T ss_pred EEEcCCCEEEEE--ECCCCCceEEecCCc---------ccc-------------ccc-cccCCCCEEEEEecC--CEEEE
Confidence 678899998875 666678887654221 000 112 346788888877766 99999
Q ss_pred eeecchhhhhcceEEEEEE
Q 011178 445 IRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 445 ~HCHil~H~d~GMm~~~~V 463 (491)
|+|= .|...||-..+.|
T Consensus 102 y~C~--~H~~~gM~G~I~V 118 (119)
T PRK02710 102 YYCE--PHRGAGMVGKITV 118 (119)
T ss_pred EEcC--CCccCCcEEEEEE
Confidence 9997 5999999999987
|
|
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.036 Score=50.30 Aligned_cols=88 Identities=17% Similarity=0.198 Sum_probs=59.2
Q ss_pred CeEEE--eeeEEEEEEecCCCCCeee--ecccCCC--CCCCCCCCC----C------CCCCCCCCCeEEEEEEeCCCccc
Q 011178 12 CSLIT--HLYTHLVVLNFIYMAPLIT--LNGVQQR--RNSWQDGVY----G------TNCPIPPGKNFTYVLQVKDQIGS 75 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N~l~~~~siH--~HG~~~~--~~~~~DG~~----~------~q~~i~PG~~~~Y~f~~~~~~Gt 75 (491)
.+|.| |-+|.|+|+|.-.-++++= --+-.++ ..-..||-. | ....|.+|++..-.|... ++|+
T Consensus 86 m~i~VPAGw~V~i~f~N~~~l~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~~~~~~~l-~aG~ 164 (196)
T PF06525_consen 86 MTIYVPAGWNVQITFTNQESLPHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSASGVYNDL-PAGY 164 (196)
T ss_pred EEEEEcCCCEEEEEEEcCCCCCeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCceeeEEEccC-CCce
Confidence 34444 4589999999854444322 1121111 123355631 2 123588999998777653 7999
Q ss_pred eeEeCCccccccCCceeEEEEecCC
Q 011178 76 YFYFPSLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 76 ~wYH~H~~~q~~~Gl~G~liV~~~~ 100 (491)
|||=|-.-.|+..||++-|+|.+.-
T Consensus 165 YwlvC~ipGHA~sGMw~~LiVs~~v 189 (196)
T PF06525_consen 165 YWLVCGIPGHAESGMWGVLIVSSNV 189 (196)
T ss_pred EEEEccCCChhhcCCEEEEEEecCc
Confidence 9999999999999999999999754
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.11 Score=46.22 Aligned_cols=85 Identities=13% Similarity=0.158 Sum_probs=59.3
Q ss_pred CeEEE--eeeEEEEEEecCCCCCeeeecccCCCCC-------CCCCCCC----CCC------CCCCCCCeEEEEEEeCCC
Q 011178 12 CSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRN-------SWQDGVY----GTN------CPIPPGKNFTYVLQVKDQ 72 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~-------~~~DG~~----~~q------~~i~PG~~~~Y~f~~~~~ 72 (491)
.||.| |=.|.|+|.|.-..++++-. -+.++ ...||.. |.. ..|.+|++..=.|+. -+
T Consensus 85 mtIyiPaGw~V~V~f~N~e~~pHnl~i---v~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gqs~sg~~~~-~~ 160 (195)
T TIGR03094 85 MTIYLPAGWNVYVTFTNYESLPHNLKL---LPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGHSRSGWWND-TS 160 (195)
T ss_pred eEEEEeCCCEEEEEEEcCCCCCccEEE---ecCCCCCCCccccccCceeEeecccccCccccccccccceeEEEecc-CC
Confidence 45554 45799999999766655444 22222 2246642 311 336788886666666 48
Q ss_pred ccceeEeCCccccccCCceeEEEEecCC
Q 011178 73 IGSYFYFPSLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 73 ~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 100 (491)
+|+|||=|-.-.+..+||+|-+||-..-
T Consensus 161 ~G~YwlvCgipGHAesGMw~~lIVSs~v 188 (195)
T TIGR03094 161 AGKYWLVCGITGHAESGMWAVVIVSSNV 188 (195)
T ss_pred CeeEEEEcccCChhhcCcEEEEEEecCc
Confidence 9999999999999999999999998753
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.11 Score=43.58 Aligned_cols=75 Identities=11% Similarity=0.034 Sum_probs=48.1
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|.|+..+. .|- |........+.. +.+.-.++.... +.++.+|.
T Consensus 15 ~~v~V~~GdTV~f~n~d~---~Hn---------v~~~~~~~p~g~-------------~~~~s~~g~~~~--~tF~~~G~ 67 (116)
T TIGR02375 15 AYIRAAPGDTVTFVPTDK---GHN---------VETIKGMIPEGA-------------EAFKSKINEEYT--VTVTEEGV 67 (116)
T ss_pred CEEEECCCCEEEEEECCC---Cee---------EEEccCCCcCCc-------------ccccCCCCCEEE--EEeCCCEE
Confidence 347889999999998875 242 222111000000 111112455544 45578999
Q ss_pred eeeeecchhhhhcceEEEEEEecC
Q 011178 443 WNIRSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~~~ 466 (491)
+-|+|=. |...||-..+.|.++
T Consensus 68 Y~Y~C~p--H~~~GM~G~V~Vg~~ 89 (116)
T TIGR02375 68 YGVKCTP--HYGMGMVALIQVGDP 89 (116)
T ss_pred EEEEcCC--CccCCCEEEEEECCC
Confidence 9999995 999999999999875
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.11 Score=47.19 Aligned_cols=88 Identities=23% Similarity=0.248 Sum_probs=61.5
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCc-----eeEEEEecCccCC-----CCccCeEEEcCCce
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGH-----KMLLVEVEGTHTL-----QNTYDSLDIHLGQS 211 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~-----~~~via~DG~~~~-----p~~~~~l~l~pGeR 211 (491)
+.+-+||......+|.+.+|-+|.++++|.+.. .|.|-+-.. ..-.++.||..+. +.....--|.+||+
T Consensus 74 ~~~nfnGts~G~m~i~VPAGw~V~i~f~N~~~l-~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s 152 (196)
T PF06525_consen 74 NPFNFNGTSNGQMTIYVPAGWNVQITFTNQESL-PHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQS 152 (196)
T ss_pred CceeeecccCCcEEEEEcCCCEEEEEEEcCCCC-CeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCce
Confidence 367888877557999999999999999998754 666665322 2346777776441 11112335679999
Q ss_pred EEEEEEeCCCCcceEEEEEe
Q 011178 212 YSVLVRADQPPQGYYIVIST 231 (491)
Q Consensus 212 ~dv~v~~~~~~g~~~i~~~~ 231 (491)
++..+..- ++|.|||.+..
T Consensus 153 ~~~~~~~l-~aG~YwlvC~i 171 (196)
T PF06525_consen 153 ASGVYNDL-PAGYYWLVCGI 171 (196)
T ss_pred eeEEEccC-CCceEEEEccC
Confidence 99877543 58999997754
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.23 Score=38.96 Aligned_cols=71 Identities=10% Similarity=0.030 Sum_probs=45.8
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|++|.| .|.+...|-+++....+ +..+ +. ...+.++.... +.++.||.|
T Consensus 12 ~i~v~~GdtVt~--~N~d~~~Hnv~~~~g~~-------~~~~-------------~~-~~~~~~g~~~~--~tf~~~G~y 66 (83)
T TIGR02657 12 ELHVKVGDTVTW--INREAMPHNVHFVAGVL-------GEAA-------------LK-GPMMKKEQAYS--LTFTEAGTY 66 (83)
T ss_pred EEEECCCCEEEE--EECCCCCccEEecCCCC-------cccc-------------cc-ccccCCCCEEE--EECCCCEEE
Confidence 467889999988 46666789888653221 1000 11 11234555555 455789999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||=+ |- .|-..+.|
T Consensus 67 ~y~C~~--Hp--~M~G~v~V 82 (83)
T TIGR02657 67 DYHCTP--HP--FMRGKVVV 82 (83)
T ss_pred EEEcCC--CC--CCeEEEEE
Confidence 999998 55 48888876
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.24 Score=43.06 Aligned_cols=93 Identities=12% Similarity=0.036 Sum_probs=66.0
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~ 444 (491)
+.++.|++++.++.|....-|=|=+= ++...- +.+.... ...-..---..++.+.||....+-+.+.++|.+-
T Consensus 65 ~~v~aG~tv~~v~~n~~el~hef~~~---~~~~~~--~~~~~~~--~~~Dme~d~~~~v~L~PG~s~elvv~ft~~g~ye 137 (158)
T COG4454 65 FEVKAGETVRFVLKNEGELKHEFTMD---APDKNL--EHVTHMI--LADDMEHDDPNTVTLAPGKSGELVVVFTGAGKYE 137 (158)
T ss_pred ccccCCcEEeeeecCcccceEEEecc---Cccccc--hhHHHhh--hCCccccCCcceeEeCCCCcEEEEEEecCCccEE
Confidence 46788999999999998776765553 111111 0010000 0000011245799999999999999999999999
Q ss_pred eeecchhhhhcceEEEEEEe
Q 011178 445 IRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 445 ~HCHil~H~d~GMm~~~~V~ 464 (491)
|-|-|-.|-+.||-..++|.
T Consensus 138 ~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 138 FACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred EEecCCCcccCCcEEEEEeC
Confidence 99999999999999999874
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.76 Score=38.44 Aligned_cols=73 Identities=8% Similarity=-0.052 Sum_probs=48.3
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|+-++. ...|-.. +.+.+.|+. ......+|+...+.| +.||.+
T Consensus 43 ~ltV~~GdTVtw~~~~d-~~~HnV~---------s~~~~~f~s--------------~~~~~~~G~t~s~Tf--~~~G~Y 96 (115)
T TIGR03102 43 AIRVDPGTTVVWEWTGE-GGGHNVV---------SDGDGDLDE--------------SERVSEEGTTYEHTF--EEPGIY 96 (115)
T ss_pred EEEECCCCEEEEEECCC-CCCEEEE---------ECCCCCccc--------------cccccCCCCEEEEEe--cCCcEE
Confidence 36789999999975532 3456542 222233321 111234566666666 689999
Q ss_pred eeeecchhhhhcceEEEEEEe
Q 011178 444 NIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|+|=. |..+||-..+.|.
T Consensus 97 ~Y~C~p--H~~~gM~G~I~V~ 115 (115)
T TIGR03102 97 LYVCVP--HEALGMKGAVVVE 115 (115)
T ss_pred EEEccC--CCCCCCEEEEEEC
Confidence 999996 9999999999873
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=92.60 E-value=1.1 Score=37.76 Aligned_cols=75 Identities=9% Similarity=0.031 Sum_probs=54.5
Q ss_pred eeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcc
Q 011178 362 TSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 362 ~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG 441 (491)
.+.+.++.|+.+.+.+.+.+ ..|-|.+-..... +.+-||....+.|.++.||
T Consensus 45 ~~~l~lp~g~~v~~~ltS~D-ViHsf~ip~~~~k---------------------------~d~~PG~~~~~~~~~~~~G 96 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSED-VIHSFWIPELGIK---------------------------MDAIPGRTNSVTFTPDKPG 96 (120)
T ss_dssp SSEEEEETTSEEEEEEEESS-S-EEEEETTCTEE---------------------------EEEBTTCEEEEEEEESSSE
T ss_pred cceecccccceEeEEEEcCC-ccccccccccCcc---------------------------cccccccceeeeeeeccCC
Confidence 34578899999999999975 5687777543321 2345789999999999999
Q ss_pred eeeeeecchhhh-hcceEEEEEEe
Q 011178 442 MWNIRSENWARQ-YLGQQFYLRVY 464 (491)
Q Consensus 442 ~w~~HCHil~H~-d~GMm~~~~V~ 464 (491)
.+-..|..+=.. +..|...++|+
T Consensus 97 ~y~~~C~e~CG~gH~~M~~~v~VV 120 (120)
T PF00116_consen 97 TYYGQCAEYCGAGHSFMPGKVIVV 120 (120)
T ss_dssp EEEEEE-SSSSTTGGG-EEEEEEE
T ss_pred cEEEcCccccCcCcCCCeEEEEEC
Confidence 999999986644 56677777663
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.96 Score=38.47 Aligned_cols=74 Identities=9% Similarity=-0.032 Sum_probs=49.3
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++-|++|+|+ |.+...|-.+. .++.. |..-+++....+.....-|.. ||.+
T Consensus 55 ~v~v~pGDTVtw~--~~d~~~Hnv~~---------~~~~~-------------~~g~~~~~~~~~~s~~~Tfe~--~G~Y 108 (128)
T COG3794 55 EVTVKPGDTVTWV--NTDSVGHNVTA---------VGGMD-------------PEGSGTLKAGINESFTHTFET--PGEY 108 (128)
T ss_pred EEEECCCCEEEEE--ECCCCCceEEE---------eCCCC-------------cccccccccCCCcceEEEecc--cceE
Confidence 3678889999995 44444676543 22111 112244444445666665554 9999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
-|.|-. |.-+||-..+.|.+
T Consensus 109 ~Y~C~P--H~~~gM~G~IvV~~ 128 (128)
T COG3794 109 TYYCTP--HPGMGMKGKIVVGE 128 (128)
T ss_pred EEEecc--CCCCCcEEEEEeCC
Confidence 999998 99999999998853
|
|
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=90.60 E-value=1 Score=41.76 Aligned_cols=78 Identities=9% Similarity=0.096 Sum_probs=57.0
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.+.++.|+.|++.+++.+ ..|-|.+- +-+ ...| +-||....+.|.++.||.
T Consensus 117 ~~l~vp~g~~v~~~~ts~D-V~Hsf~ip-------~~~-----------------~k~d---a~PG~~~~~~~~~~~~G~ 168 (201)
T TIGR02866 117 NELVVPAGTPVRLQVTSKD-VIHSFWVP-------ELG-----------------GKID---AIPGQYNALWFNADEPGV 168 (201)
T ss_pred CEEEEEcCCEEEEEEEeCc-hhhccccc-------ccC-----------------ceEE---ecCCcEEEEEEEeCCCEE
Confidence 3477899999999999875 33554442 211 1223 447899999999999999
Q ss_pred eeeeecchhhh-hcceEEEEEEecCCc
Q 011178 443 WNIRSENWARQ-YLGQQFYLRVYSSAN 468 (491)
Q Consensus 443 w~~HCHil~H~-d~GMm~~~~V~~~~~ 468 (491)
+...|-..-.. +..|...++|.++++
T Consensus 169 y~~~c~e~cG~~h~~M~~~v~v~~~~~ 195 (201)
T TIGR02866 169 YYGYCAELCGAGHSLMLFKVVVVEREE 195 (201)
T ss_pred EEEEehhhCCcCccCCeEEEEEECHHH
Confidence 99999985433 577888888887653
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.29 E-value=0.74 Score=40.13 Aligned_cols=75 Identities=19% Similarity=0.309 Sum_probs=53.0
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEe--C----ceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceE
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQ--G----HKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYY 226 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~--~----~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~ 226 (491)
...++++.|++||+-+-|.+.. .+.|.++ + |.-..+.+| -.+--....+.|.||+...+.+.+. .+|+|.
T Consensus 62 p~~~~v~aG~tv~~v~~n~~el-~hef~~~~~~~~~~~~~~~~~~~--Dme~d~~~~v~L~PG~s~elvv~ft-~~g~ye 137 (158)
T COG4454 62 PSSFEVKAGETVRFVLKNEGEL-KHEFTMDAPDKNLEHVTHMILAD--DMEHDDPNTVTLAPGKSGELVVVFT-GAGKYE 137 (158)
T ss_pred CCcccccCCcEEeeeecCcccc-eEEEeccCccccchhHHHhhhCC--ccccCCcceeEeCCCCcEEEEEEec-CCccEE
Confidence 5679999999999999999865 5566555 1 111112222 1122334789999999999999998 579999
Q ss_pred EEEEe
Q 011178 227 IVIST 231 (491)
Q Consensus 227 i~~~~ 231 (491)
+++..
T Consensus 138 ~~C~i 142 (158)
T COG4454 138 FACNI 142 (158)
T ss_pred EEecC
Confidence 97754
|
|
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=90.07 E-value=6.1 Score=33.31 Aligned_cols=61 Identities=23% Similarity=0.380 Sum_probs=46.7
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
...+.++.|++++|++-+.-. .+.|.+.+..+ .+.+-||+.-.+.++++ .+|.|+++.+-.
T Consensus 45 ~~~l~lp~g~~v~~~ltS~DV--iHsf~ip~~~~----------------k~d~~PG~~~~~~~~~~-~~G~y~~~C~e~ 105 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSEDV--IHSFWIPELGI----------------KMDAIPGRTNSVTFTPD-KPGTYYGQCAEY 105 (120)
T ss_dssp SSEEEEETTSEEEEEEEESSS---EEEEETTCTE----------------EEEEBTTCEEEEEEEES-SSEEEEEEE-SS
T ss_pred cceecccccceEeEEEEcCCc--cccccccccCc----------------ccccccccceeeeeeec-cCCcEEEcCccc
Confidence 578999999999999998654 46666655433 34567899999999998 689999988754
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=88.78 E-value=3.5 Score=32.19 Aligned_cols=65 Identities=14% Similarity=0.294 Sum_probs=38.1
Q ss_pred EEEEEEEcCCCCeEeEEEe-Cc--eeEEEEecCccCC------C--CccCeEEEcCCceEEEEEEeCCC---CcceEEEE
Q 011178 164 YRFRISNVGISTSINFRIQ-GH--KMLLVEVEGTHTL------Q--NTYDSLDIHLGQSYSVLVRADQP---PQGYYIVI 229 (491)
Q Consensus 164 ~rlR~iN~~~~~~~~~~i~-~~--~~~via~DG~~~~------p--~~~~~l~l~pGeR~dv~v~~~~~---~g~~~i~~ 229 (491)
+.|.+.|.+.. .+.|.+. |+ .|.|...+|..+- . .......|.|||...+-.+.+.. +|+|.+.+
T Consensus 4 ~~l~v~N~s~~-~v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~~a 82 (82)
T PF12690_consen 4 FTLTVTNNSDE-PVTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPGEYTLEA 82 (82)
T ss_dssp EEEEEEE-SSS--EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SEEEEEEE
T ss_pred EEEEEEeCCCC-eEEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCceEEEeC
Confidence 56788888865 6677764 34 4555555676441 1 22467899999999999998863 79998864
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=83.76 E-value=15 Score=33.01 Aligned_cols=95 Identities=12% Similarity=-0.096 Sum_probs=56.5
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCC-CCC---CCCCccc--CCCCceeeEEeCCCCEEEEEEEc
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEW-TPA---SRLTYNL--RDTISRCTVQVYPKSWTAVYVPL 437 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~-~~~---~~~~~~~--~~p~~rDTv~v~p~~~~~irf~a 437 (491)
.+-++.|-.|.++|.|.+..+|-+ -|+..+.... .+. +.+..+. ..+.--..=-+.+|....+-|..
T Consensus 86 tIyiPaGw~V~V~f~N~e~~pHnl-------~iv~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gqs~sg~~~~ 158 (195)
T TIGR03094 86 TIYLPAGWNVYVTFTNYESLPHNL-------KLLPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGHSRSGWWND 158 (195)
T ss_pred EEEEeCCCEEEEEEEcCCCCCccE-------EEecCCCCCCCccccccCceeEeecccccCccccccccccceeEEEecc
Confidence 366788999999999999777653 3443322100 000 0000000 00000011112235555566666
Q ss_pred cCcceeeeeecchhhhhcceEEEEEEec
Q 011178 438 DNVGMWNIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 438 dnpG~w~~HCHil~H~d~GMm~~~~V~~ 465 (491)
-.||.+.+=|=+.-|...||-..+.|-.
T Consensus 159 ~~~G~YwlvCgipGHAesGMw~~lIVSs 186 (195)
T TIGR03094 159 TSAGKYWLVCGITGHAESGMWAVVIVSS 186 (195)
T ss_pred CCCeeEEEEcccCChhhcCcEEEEEEec
Confidence 6899999999999999999999987754
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.73 E-value=4.1 Score=38.96 Aligned_cols=78 Identities=10% Similarity=0.140 Sum_probs=56.2
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.+.++.|+.|++.++..+ ..|-|.+-+.. --+.+-||....+.+.++.||.
T Consensus 137 n~l~lPv~~~V~f~ltS~D-ViHsF~IP~l~---------------------------~k~d~iPG~~~~~~~~~~~~G~ 188 (247)
T COG1622 137 NELVLPVGRPVRFKLTSAD-VIHSFWIPQLG---------------------------GKIDAIPGMTTELWLTANKPGT 188 (247)
T ss_pred ceEEEeCCCeEEEEEEech-hceeEEecCCC---------------------------ceeeecCCceEEEEEecCCCeE
Confidence 4577899999999999875 44655553322 2233346788899999999999
Q ss_pred eeeeecchhhh-hcceEEEEEEecCCc
Q 011178 443 WNIRSENWARQ-YLGQQFYLRVYSSAN 468 (491)
Q Consensus 443 w~~HCHil~H~-d~GMm~~~~V~~~~~ 468 (491)
+-.+|+.+--. +..|-..+.|+++++
T Consensus 189 Y~g~Cae~CG~gH~~M~~~v~vvs~~~ 215 (247)
T COG1622 189 YRGICAEYCGPGHSFMRFKVIVVSQED 215 (247)
T ss_pred EEEEcHhhcCCCcccceEEEEEEcHHH
Confidence 99999997755 555666677766544
|
|
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=80.93 E-value=2.6 Score=32.90 Aligned_cols=60 Identities=23% Similarity=0.238 Sum_probs=34.3
Q ss_pred eEEEEEEecCCCCCeeeecccC-C-------C---CCCCCCCCCCCCC----CCCCCCeEEEEEEeCCC---ccceeE
Q 011178 19 YTHLVVLNFIYMAPLITLNGVQ-Q-------R---RNSWQDGVYGTNC----PIPPGKNFTYVLQVKDQ---IGSYFY 78 (491)
Q Consensus 19 ~v~i~~~N~l~~~~siH~HG~~-~-------~---~~~~~DG~~~~q~----~i~PG~~~~Y~f~~~~~---~Gt~wY 78 (491)
.+.++++|..+.+.+|.+.--. . . .=-|++|-..+|. -|+||++.+|+++.+.. +|+|..
T Consensus 3 ~~~l~v~N~s~~~v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~ 80 (82)
T PF12690_consen 3 EFTLTVTNNSDEPVTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPGEYTL 80 (82)
T ss_dssp EEEEEEEE-SSS-EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SEEEEE
T ss_pred EEEEEEEeCCCCeEEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCceEEE
Confidence 4678899999888888765431 1 0 1236677655543 39999999999999733 688854
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 491 | ||||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 6e-29 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 1e-16 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 1e-16 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 3e-16 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 3e-16 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 3e-15 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 4e-15 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 7e-15 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 7e-15 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 8e-15 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 2e-14 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 3e-14 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 3e-14 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 5e-14 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 1e-13 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 4e-13 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 4e-13 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 1e-11 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 2e-11 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 2e-11 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 3e-11 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 7e-10 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 7e-10 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 3e-09 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 3e-07 |
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 491 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 1e-155 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 2e-69 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 5e-60 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 8e-60 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 1e-58 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 2e-58 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 4e-55 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 1e-54 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 9e-36 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 4e-35 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 1e-24 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 9e-20 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 4e-16 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 4e-16 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 6e-14 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 4e-13 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 4e-13 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 5e-13 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 3e-12 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-11 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 7e-04 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 7e-12 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 2e-11 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 2e-10 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 3e-09 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 1e-06 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 5e-08 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 5e-07 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 2e-05 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 2e-05 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 3e-05 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 4e-05 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 7e-05 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 451 bits (1162), Expect = e-155
Identities = 124/502 (24%), Positives = 201/502 (40%), Gaps = 60/502 (11%)
Query: 33 LITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGY 91
+I +G+ QR W DG + C I PG+ F Y V D G++FY L ++AG Y
Sbjct: 58 VIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLY 116
Query: 92 GGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGS--DLPFPDGLVINGR 149
G + + PF G+ +L DW+ ++ + L S + P +++NGR
Sbjct: 117 GSLIVDPPQGKKEPFHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGR 175
Query: 150 G------------------------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHK 185
G F V KTYR RI++ ++NF I H+
Sbjct: 176 GQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQ 235
Query: 186 MLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG-YYIVISTRFTSQ-VLSATSV 243
+L+VE +G + +DI+ G+SYSVL+ DQ P Y++ + TR ++
Sbjct: 236 LLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTL 295
Query: 244 LHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTI 303
L+Y ++ S P P T +++++ +TA+ P P + I
Sbjct: 296 LNYLPNSVS-KLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPP-------VKFNRRI 347
Query: 304 RLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD----------NP 353
L NT ING ++A+N VS TP A + + F P+ P
Sbjct: 348 FLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPP 407
Query: 354 TGGGAYLQTSVMAADFRGFAEVVFENPE------DTLQSWHIDGHNFFAVGMDGGEWTPA 407
T + V +V+ +N WH+ GH+F+ +G G+++
Sbjct: 408 TNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE 467
Query: 408 SRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSA 467
+ NL++ R TV ++P WTA+ DN G+W ++G
Sbjct: 468 EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAE---- 523
Query: 468 NSWRDEYPIPSNALLCGRAVGH 489
IP+ AL CG
Sbjct: 524 -GVEKVGRIPTKALACGGTAKS 544
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 229 bits (585), Expect = 2e-69
Identities = 93/424 (21%), Positives = 141/424 (33%), Gaps = 60/424 (14%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96
G+ QR +W DG G CPI PG F Y G+++Y G G + I
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
Query: 97 ASRP-LIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN- 154
+D + I DWY ++ PD +ING+G
Sbjct: 127 YDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGA-------AQPDATLINGKGRYVGG 179
Query: 155 ------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 208
V+QGK YR R+ ++ + F I GH++ ++EV+G T +T D L I
Sbjct: 180 PAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFT 239
Query: 209 GQSYSVLVRADQPPQGYYIVISTRFTSQVLS-------ATSVLHYSNSAGSVSGPPPGGP 261
GQ YS ++ A+QP Y+I L+ +++L Y+ +A + P
Sbjct: 240 GQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANAD--PTTSAN 297
Query: 262 TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVN 321
+ +L P P +R Q R+ +N
Sbjct: 298 PNPAQLNEADLHALIDPAAPGIPTPGA----------ADVNLRFQLG----FSGGRFTIN 343
Query: 322 SVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381
++ P L D G SV E+V
Sbjct: 344 GTAYESPSVPTLLQIMSGAQSAN------DLLPAG------SVYELPRNQVVELVVPAGV 391
Query: 382 DTLQ-SWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPK-SWTAVYVPLDN 439
+H+ GH F V A TYN + + R V + + DN
Sbjct: 392 LGGPHPFHLHGHAFSVVRS-------AGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN 444
Query: 440 VGMW 443
G W
Sbjct: 445 PGPW 448
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 5e-60
Identities = 95/426 (22%), Positives = 144/426 (33%), Gaps = 49/426 (11%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFH-----KAAGGY 91
G+ Q + DGV T CPI PG Y V +G+Y+Y H + G
Sbjct: 63 GLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWY------HSHTDGQYEDGM 116
Query: 92 GGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDL----PFPDGLVIN 147
G+ I P +D + ++ +WY TDL S + P P L++N
Sbjct: 117 KGLFIIKDDSFPYDYD---EELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVN 173
Query: 148 GRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
+ T+ V TY RI NVG S F I+ H+M +VE++G T +N D L I
Sbjct: 174 NTMNL--TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYIT 231
Query: 208 LGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDW 267
+ Q Y+VLV + I +F +L N+ + TQ
Sbjct: 232 VAQRYTVLVHTKNDTDKNFA-IMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYV 290
Query: 268 SLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQ-NTAPTINGKQRYAVNSVSFI 326
L H I + NG N++++
Sbjct: 291 DSIDNFLDDFYLQPYEKEAIYG--------EPDHVITVDVVMDNLKNGVNYAFFNNITYT 342
Query: 327 PADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQS 386
P + V S G +N G+ T + E+V N +
Sbjct: 343 APKVPTLMT-------VLSSGDQANNSEIYGS--NTHTFILEKDEIVEIVLNNQDTGTHP 393
Query: 387 WHIDGHNFFAVGMDGGEWTPA---------SRLTYNLRDTISRCTVQVYPKSWTAVYVPL 437
+H+ GH F + D + R T+ V P+S +
Sbjct: 394 FHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKA 453
Query: 438 DNVGMW 443
DN G+W
Sbjct: 454 DNPGVW 459
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 204 bits (520), Expect = 8e-60
Identities = 99/420 (23%), Positives = 144/420 (34%), Gaps = 52/420 (12%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96
G Q + DG CPI P ++F Y V Q G+Y+Y L+ G G +
Sbjct: 88 GFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVV 147
Query: 97 AS-RPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN- 154
+D I DWY T L + P PD +ING G N+
Sbjct: 148 YDPNDPHLSLYDVDDASTVITIADWYHSLSTVL--FPNPNKAPPAPDTTLINGLGRNSAN 205
Query: 155 -------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
+V GK YRFRI + + F I GH+M ++EV+G T DSL I
Sbjct: 206 PSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIF 265
Query: 208 LGQSYSVLVRADQPPQGYYI---VISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQ 264
GQ YSV+V A+Q Y+I + R +++ Y +A P +
Sbjct: 266 AGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAA---VAEPTTSQNSG 322
Query: 265 IDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVS 324
+ L P P I L + +N
Sbjct: 323 TALNEANLIPLINPGAPGNPVP------------GGADINLNLRIGRNATTADFTINGAP 370
Query: 325 FIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTL 384
FIP P+ L + S + P++ G +V++ E+ +
Sbjct: 371 FIPPTVPVLLQ-------ILSGVTNPNDLLPG-----GAVISLPANQVIEISIPGGGN-- 416
Query: 385 QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPK-SWTAVYVPLDNVGMW 443
+H+ GHNF V G YN + + R V + DN G W
Sbjct: 417 HPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPW 469
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 1e-58
Identities = 94/432 (21%), Positives = 150/432 (34%), Gaps = 62/432 (14%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96
G++Q + DGV G T CPI PG TY QV Q G+ +Y + G +G + I
Sbjct: 127 GIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLII 185
Query: 97 ASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN-- 154
D I DW ++ ++ G+ P + ++NG +
Sbjct: 186 NGPATADYDEDVG----VIFLQDWAHESVFEIWDTARLGAP-PALENTLMNGTNTFDCSA 240
Query: 155 -------------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 201
T +G YR R+ NVGI + F I H + ++ + + T
Sbjct: 241 STDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTT 300
Query: 202 DSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQV----LSATSVLHYSNSAGSVSGPP 257
D+L I +GQ Y V+V A+ Y+I + T +AT +L Y +S S++ P
Sbjct: 301 DTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSS--SIANPT 358
Query: 258 PGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQR 317
G T + E SL +L + + +
Sbjct: 359 SVGTTPRGTCEDEPVASLVPHLALDVGGYSLVD---------------EQVSSAFTNYFT 403
Query: 318 YAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVF 377
+ +NS S + + F +F P + E V
Sbjct: 404 WTINSSSLLLDWSSPTTLKIFNNETIF-----PTEYNVVALEQTNAN--------EEWVV 450
Query: 378 ENPEDTLQS-----WHIDGHNFFAVGMDGGEWTP-ASRLTYNLRDTISRCTVQVYPKSWT 431
ED H+ GH+FF V + + S +NL + R + +
Sbjct: 451 YVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYL 510
Query: 432 AVYVPLDNVGMW 443
A+ LDN G W
Sbjct: 511 AIAFKLDNPGSW 522
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 2e-58
Identities = 93/424 (21%), Positives = 144/424 (33%), Gaps = 59/424 (13%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96
G Q +W DG CPI PG +F Y QV DQ G+++Y L+ G G +
Sbjct: 67 GFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 97 AS-RPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN- 154
+D D I DWY HT K D +ING+G +
Sbjct: 127 YDPNDPHASRYDVDNDDTVITLADWY---HTAAKL---GPRFPGGADATLINGKGRAPSD 180
Query: 155 ------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 208
V +GK YRFR+ ++ + + F I GH + ++EV+ ++ DS+ I
Sbjct: 181 SVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFA 240
Query: 209 GQSYSVLVRADQPPQGYYIVISTRFTSQVL---SATSVLHYSNSAGSVSGPPPGGPTTQI 265
Q YS ++ A+Q Y+I + F + +++L Y + +
Sbjct: 241 AQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVKPL 300
Query: 266 DWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSF 325
+ +L P P I + NG + +N SF
Sbjct: 301 NEV---------DLHPLVSTPVPGAPSS---GGVDKAINMAF---NFNGS-NFFINGASF 344
Query: 326 IPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQ 385
+P P+ L + S + G SV E+ F
Sbjct: 345 VPPTVPVLLQ-------ILSGAQTAQDLLPSG-----SVYVLPSNASIEISFPATAAAPG 392
Query: 386 S---WHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVY---PKSWTAVYVPLDN 439
+ +H+ GH F V G YN + I R V + +N
Sbjct: 393 APHPFHLHGHTFAVVRSAGST-------VYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN 445
Query: 440 VGMW 443
G W
Sbjct: 446 PGPW 449
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 4e-55
Identities = 86/422 (20%), Positives = 138/422 (32%), Gaps = 56/422 (13%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96
G Q+ +W DG T CPI G +F+Y V G+Y+Y L G G +
Sbjct: 68 GEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVV 127
Query: 97 AS-RPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN- 154
+D I DWY ++ D +I+G G
Sbjct: 128 YDPNDPDANLYDVDDDTTIITLADWYHVLAKEM-----GAGGAITADSTLIDGLGRTHVN 182
Query: 155 -------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
TV+ GK YR R+ ++ + +F I GH M ++E +G + + T D + I
Sbjct: 183 VAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIF 242
Query: 208 LGQSYSVLVRADQPPQGYYIVISTRFTSQVL---SATSVLHYSNSAGSVSGPPPGGPTTQ 264
Q YS ++ A+QP Y+I + + +++L Y + + + P T
Sbjct: 243 AAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGA--TTADPVTVASTVH 300
Query: 265 IDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTIN-GKQRYAVNSV 323
+E +L P N N ++ + +N V
Sbjct: 301 TKCLIET------DLHPLSRNGVPG--------NPHQGGADCNLNLSLGFACGNFVINGV 346
Query: 324 SFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 383
SF P P+ L + SV++ E+
Sbjct: 347 SFTPPTVPVLLQICSGANTAADLLP------------SGSVISLPSNSTIEIALPAGAAG 394
Query: 384 LQ-SWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYP-KSWTAVYVPLDNVG 441
+H+ GH+F T N D I R V + + DN G
Sbjct: 395 GPHPFHLHGHDFAVSESASNS-------TSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPG 447
Query: 442 MW 443
W
Sbjct: 448 PW 449
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 191 bits (486), Expect = 1e-54
Identities = 88/435 (20%), Positives = 145/435 (33%), Gaps = 60/435 (13%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPP-GKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIK 95
G+ Q+ + DG G T CPIPP G TY + Q G+ +Y + G G I+
Sbjct: 96 GIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQ 154
Query: 96 IASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN- 154
I +P D D+Y + DL + + PF D ++ING N N
Sbjct: 155 INGPASLPYDID----LGVFPITDYYYRAADDLVHFTQNNAP-PFSDNVLINGTAVNPNT 209
Query: 155 ------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 208
T+ GK +R RI N + H M ++ + T DSL + +
Sbjct: 210 GEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAV 269
Query: 209 GQSYSVLVRADQPPQGYYIVISTRFTSQV-----LSATSVLHYSNSAGSVSGPPPGGPTT 263
GQ Y V++ A + P Y+ ++ + ++ HY+ + P G PT
Sbjct: 270 GQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGA-------PGGLPTD 322
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 323
+ ++ ++ PR P S+ + T + L T + + VN
Sbjct: 323 EGTPPVDHQCLDTLDVRPVVPRSVPVNSF-VKRPDNTLPVALDLTGTPLF---VWKVNGS 378
Query: 324 SF-IPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPED 382
+ P I + + + + + EN +
Sbjct: 379 DINVDWGKP-------IIDYILTGNTSYPVSDNIVQVDAVDQ-------WTYWLIENDPE 424
Query: 383 TLQS----WHIDGHNFFAVGMDGGEWTP----------ASRLTYNLRDTISRCTVQVYPK 428
S H+ GH+F +G N + R T +
Sbjct: 425 GPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG 484
Query: 429 SWTAVYVPLDNVGMW 443
W + DN G W
Sbjct: 485 GWLLLAFRTDNPGAW 499
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 9e-36
Identities = 43/197 (21%), Positives = 70/197 (35%), Gaps = 16/197 (8%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFY---FPSLAFHKAAGGYGG 93
G+ QR DGV T I PG FTY + + G+ +Y G +G
Sbjct: 62 GMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGP 120
Query: 94 IKIASRPLIPVPFDPPA-GDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152
+ + P P+P + D+ ++ DW + + G D IN +
Sbjct: 121 LIV--EPKNPLPIEKTVTKDYILMLSDWV---SSWANKPGEGGIPGDVFDYYTINAKSFP 175
Query: 153 AN-TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTH-TLQNTYDSLDIHLGQ 210
V +G R R+ G GH + +G D++ I G+
Sbjct: 176 ETQPIRVKKGDVIRLRLIGAG-DHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGE 234
Query: 211 SYSVLVRADQPPQGYYI 227
Y V++ D P G ++
Sbjct: 235 RYDVILNMDNP--GLWM 249
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-35
Identities = 52/267 (19%), Positives = 89/267 (33%), Gaps = 21/267 (7%)
Query: 38 GVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFY---FPSLAFHKAAGGYGG 93
GV Q+ DGV G T PI G ++TY + D+IG+ +Y G +G
Sbjct: 63 GVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGP 121
Query: 94 IKIASRPLIPVPFDPP-AGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGR-GS 151
+ + P P+P + D ++ W + G+ + D +N +
Sbjct: 122 LIV--DPKQPLPIEKRVTKDVIMMMSTWE---SAVADKYGEGGTPMNVADYFSVNAKSFP 176
Query: 152 NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGT-HTLQNTYDSLDIHLGQ 210
V +G + R G GH ML+ +G D++ + G+
Sbjct: 177 LTQPLRVKKGDVVKIRFFGAG-GGIHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGE 235
Query: 211 SYSVLVRADQPPQGYYIVISTRFTSQVLS----ATSVLHY---SNSAGSVSGPPPGGPTT 263
Y V++ AD P + + + +V+ Y V P
Sbjct: 236 RYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVPVDDWYVWKDKDYDPNF 295
Query: 264 QIDWSLEQARSLRRNLTASGPRPNPQG 290
SL+Q + + G Q
Sbjct: 296 FYSESLKQGYGMFDHDGFKGEFEQRQR 322
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-24
Identities = 68/405 (16%), Positives = 119/405 (29%), Gaps = 74/405 (18%)
Query: 46 WQDGVYGTNCPIPPGKNFTYVLQVKDQI-GSYFY----FPSLAFHKAAGGYGGIKIASRP 100
D + IPPG+++TY V ++ G+++Y +A AG G + + S
Sbjct: 81 KVDDPF---LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVES-S 136
Query: 101 LIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQ 160
L +P A + ++ D + + D +++NG V Q
Sbjct: 137 LDAIPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL---RPTLVAQ 193
Query: 161 GKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ-NTYDSLDIHLGQSYSVLVRAD 219
T R R+ N + +Q H + L+ +G + L + G+ VLVR
Sbjct: 194 KATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLR 253
Query: 220 QPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNL 279
+ + ++ + + A P I + L + L
Sbjct: 254 KEGRF---LLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKAL 310
Query: 280 TASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFK 339
+ P P + L T + ING+ F LK
Sbjct: 311 SPFPTLPAPVVTRRLVL-----TEDMMAARFFINGQ--------VFDHRRVDLKGQ---- 353
Query: 340 IPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV-VFENPEDTLQSWHIDGHNFFAVG 398
EV EN D +H+ H F +
Sbjct: 354 ------------------------------AQTVEVWEVENQGDMDHPFHLHVHPFQVLS 383
Query: 399 MDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+ G + + +D V + + VPL G
Sbjct: 384 VGGRPFPYRAW-----KD-----VVNLKAGEVARLLVPLREKGRT 418
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 88.3 bits (219), Expect = 9e-20
Identities = 40/186 (21%), Positives = 59/186 (31%), Gaps = 25/186 (13%)
Query: 43 RNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFY---FPSLAFHKAAGGYGGIKIAS 98
+ DG G I PG++FTY G++ Y LA H A G YGG +
Sbjct: 96 HRATMDGTPGIGAGSIAPGQSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIV-- 152
Query: 99 RPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGR--GSNANTF 156
P P + ++ + D + +NG
Sbjct: 153 EP--KEGRPPADDEMVMVMNGYNTDGGDD-------------NEFYSVNGLPFHFMDFPV 197
Query: 157 TVDQGKTYRFRISNVGISTSIN-FRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVL 215
V Q + R + NV IN F I G+ T D++ GQ +
Sbjct: 198 KVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILE 257
Query: 216 VRADQP 221
+R P
Sbjct: 258 LRFPYP 263
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 79.6 bits (196), Expect = 4e-16
Identities = 59/412 (14%), Positives = 110/412 (26%), Gaps = 81/412 (19%)
Query: 46 WQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFY----FPSLAFHKAAGGYGGIKIASRPL 101
D + I PG+++ Y V ++ G+Y Y A G G + +
Sbjct: 72 HNDAH--PSFAITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVED-SG 128
Query: 102 IPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFP----DGLVINGRGSNANTFT 157
+ F D ++ D + + + +++NG +
Sbjct: 129 SDLGFKYGVNDLPLVISDRR---FIGGAPVYNPTPMEMIAGFLGNAVLVNGV---KDAVF 182
Query: 158 VDQGKTYRFRISNVGISTSINFRIQGHK-----MLLVEVEGTHTLQ-NTYDSLDIHLGQS 211
G +YR R+ N + I M L+ V+ + +L + +
Sbjct: 183 KLSGGSYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAER 242
Query: 212 YSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQ 271
V+V +G Y++ +T F L + P G I L +
Sbjct: 243 AEVVVEL---GEGVYLLKNTPFDPMHLEM---------GHGMQEALPEGSEYTIATFLVE 290
Query: 272 ARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTP 331
+ + A P + L TING F A P
Sbjct: 291 GKGEAVPVEALSDPPPEPPK---PTRTRRFALSLSGMQWTINGM---------FWNASNP 338
Query: 332 LKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDG 391
+ ++ + G L + + H+ G
Sbjct: 339 -----------------LFEHVSVEGVELWE-------------IVNDKASMPHPMHLHG 368
Query: 392 HNFFAVGMDGGEWTPASRLTYNLRDTISRC----TVQVYPKSWTAVYVPLDN 439
+ + A N + TV ++P + V D
Sbjct: 369 FPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDA 420
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 79.6 bits (196), Expect = 4e-16
Identities = 70/409 (17%), Positives = 122/409 (29%), Gaps = 78/409 (19%)
Query: 47 QDGVYGTNCPIPPGKNFTYVLQV-KDQIGSYFY----FPSLAFHKAAGGYGGIKIASRPL 101
QDG + PI G+ Y ++ +D G+Y+Y + + G G I +
Sbjct: 117 QDGS--PHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKA-KK 173
Query: 102 IPVPFDPPAGDFTILAGDW-YKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQ 160
+ + ++ D +N L+ + + ++ING+ +
Sbjct: 174 DALSHLK---EKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFK----PKIKL 226
Query: 161 GKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ-NTYDSLDIHLGQSYSVLVRAD 219
R RI N + +N RIQG K +LV +G + + L + VL+ A
Sbjct: 227 ATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDA- 285
Query: 220 QPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNL 279
P G + + S +Y V P I+ E L +NL
Sbjct: 286 -PKDGNFKLES-------------AYYDRDKMMVKEEPNTLFLANINLKKENV-ELPKNL 330
Query: 280 TASGPRPNPQGSYHYGLINTTHTIRLQNTAPT----INGKQRYAVNSVSFIPADTPLKLA 335
P P+ + + I + +N S+ L
Sbjct: 331 KIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLKRIDLSSK 390
Query: 336 DYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFF 395
+G + + + N +HI G F
Sbjct: 391 ----------LGVV-----------------------EDWIVINKSHMDHPFHIHGTQFE 417
Query: 396 AVG-MDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443
+ G+ A LRD T+ V P + + D G+
Sbjct: 418 LISSKLNGKVQKAEFRA--LRD-----TINVRPNEELRLRMKQDFKGLR 459
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 6e-14
Identities = 39/175 (22%), Positives = 62/175 (35%), Gaps = 14/175 (8%)
Query: 56 PIPPGKNFTYVLQVKDQIGSYFY---FPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGD 112
PG T+ + G Y Y + H A G YG I + + P +
Sbjct: 102 FTAPGHTSTFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKE----GLAPVDRE 156
Query: 113 FTILAGDWYKKNHTDLKAILDSGSDLPF---PDGLVINGRGS---NANTFTVDQGKTYRF 166
+ ++ GD+Y K + D +V NG + N+ T G+T R
Sbjct: 157 YYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLTAKVGETVRL 216
Query: 167 RISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 221
I N G + +F + G V VEG + + I G + V + + P
Sbjct: 217 YIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVP 271
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 70.4 bits (172), Expect = 4e-13
Identities = 64/416 (15%), Positives = 113/416 (27%), Gaps = 49/416 (11%)
Query: 47 QDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP----SLAFHKAAGGYGGIKI--ASRP 100
DG IPPG + L V + ++ P A G G + I
Sbjct: 83 VDGGPQ--GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEIL 140
Query: 101 LIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLP--FPDGLVINGRGSNANTFTV 158
+ +P D ++ D + LD + F D L+ NG
Sbjct: 141 KLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHA 197
Query: 159 DQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHTLQ-NTYDSLDIHLGQSYSVLV 216
R R+ N + S+NF + ++ +G + L + +G+ + VLV
Sbjct: 198 APRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLV 257
Query: 217 RADQPPQGYYIVISTRFTSQVL----SATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQA 272
+ + + + V+ A S SG P ++ +
Sbjct: 258 EVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEG 317
Query: 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPL 332
++R+ + P + G ++ Q +
Sbjct: 318 LTVRKLQLSMDPMLDMMGM------QMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHG 371
Query: 333 KLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV-FENPED-TLQSWHID 390
D+ N G A+ M A +G E D L +HI
Sbjct: 372 GKFDFH-----------HANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIH 420
Query: 391 GHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWT---AVYVPLDNVGMW 443
G F + +G +D TV+V +
Sbjct: 421 GTQFRILSENGKPPAAHRAG---WKD-----TVKVEGNVSEVLVKFNHDAPKEHAY 468
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 4e-13
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 14/175 (8%)
Query: 56 PIPPGKNFTYVLQVKDQIGSYFY---FPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGD 112
PG+ T+ + Q G Y Y + H A G YG I + + +P D +
Sbjct: 112 FTAPGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKV-DK---E 166
Query: 113 FTILAGDWYKKNHTDLKAILDSGSDLPF---PDGLVINGRGSN---ANTFTVDQGKTYRF 166
F I+ GD+Y K + + D P+ +V NG N G+T R
Sbjct: 167 FYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVRM 226
Query: 167 RISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 221
+ N G + +F + G V VEG + S + G S V + D P
Sbjct: 227 YVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIP 281
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 5e-13
Identities = 60/442 (13%), Positives = 113/442 (25%), Gaps = 88/442 (19%)
Query: 23 VVLNFIYMAPL---ITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFY- 78
V+ FI A + L+G R + DG PG Y + + +Y
Sbjct: 79 TVVRFINNAEAPNSVHLHGSFSR--AAFDGW--AEDITEPGSFKDYYYPNRQSARTLWYH 134
Query: 79 ---FPSLAFHKAAGGYGGIKI--ASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILD 133
A + G G + + + +P D ++ +T ++
Sbjct: 135 DHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQ---YTANGNLVT 191
Query: 134 SGSDLP--FPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV 191
+ +L + D + +NG+ F + + YRFR + +S S + +
Sbjct: 192 TNGELNSFWGDVIHVNGQ---PWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRL 248
Query: 192 EGTHTLQN--------TYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSV 243
+ L I + + Y V+ + + + + +
Sbjct: 249 PFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTD 308
Query: 244 LHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTI 303
++ V TTQ D S+ A P P+P +
Sbjct: 309 ---YDNTDKVMRFVVADDTTQPDTSVVPAN------LRDVPFPSPTTN-----TPRQFRF 354
Query: 304 RLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTS 363
TING +F + N G
Sbjct: 355 GRTGPTWTINGV--------AFADVQNR-----------------LLANVPVGTVERWE- 388
Query: 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWT-PASRLTYNLRDTISRCT 422
+ HI +F + G L+D
Sbjct: 389 ------------LINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKD-----V 431
Query: 423 VQVYPKSWTAVYVPL-DNVGMW 443
V + + V G++
Sbjct: 432 VWLGRRETVVVEAHYAPFPGVY 453
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 68.1 bits (165), Expect = 3e-12
Identities = 32/195 (16%), Positives = 58/195 (29%), Gaps = 30/195 (15%)
Query: 52 GTNCPIPPGKNFTYVLQVKDQI---------GSYFYFP--SLAFHKAAGGYGGIKIASRP 100
T P PG+ TYV ++ ++ + Y+ +G G + + RP
Sbjct: 844 STVTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRP 903
Query: 101 LIPVPFDPPAGDFTILAGDWY------------KKNHTDLKAILDSGSDLPFPDGLVING 148
+ V +F +L + + K D + ING
Sbjct: 904 YLKVFNPRRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAING 963
Query: 149 R-GSNANTFTVDQGKTYRFRISNVGISTSIN-FRIQGHKMLLVEVEGTHTLQNTYDSLDI 206
R N T+ G + + +G ++ GH + D DI
Sbjct: 964 RMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSS-----DVFDI 1018
Query: 207 HLGQSYSVLVRADQP 221
G ++ + P
Sbjct: 1019 FPGTYQTLEMFPRTP 1033
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 66.5 bits (161), Expect = 1e-11
Identities = 21/199 (10%), Positives = 58/199 (29%), Gaps = 34/199 (17%)
Query: 49 GVYGTNCPIPPGKNFTYVLQVKDQ---------IGSYFYFP--SLAFHKAAGGYGGIKIA 97
+ + PG+ +TY+L ++ + Y A+G G + I
Sbjct: 141 DFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIIC 200
Query: 98 SR-PLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPF------------PDGL 144
+ L +F ++ + L+ + + P
Sbjct: 201 KKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMY 260
Query: 145 VINGR-GSNANTFTVDQGKTYRFRISNVGISTSIN-FRIQGHKMLLVEVEGTHTLQNTYD 202
+NG + + ++ ++ + +G ++ G + + D
Sbjct: 261 SVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQA---LTNKNYRI-----D 312
Query: 203 SLDIHLGQSYSVLVRADQP 221
++++ + + A P
Sbjct: 313 TINLFPATLFDAYMVAQNP 331
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 7e-04
Identities = 26/203 (12%), Positives = 55/203 (27%), Gaps = 35/203 (17%)
Query: 46 WQDGVYGTNCPIPPGKNFTYVLQVKDQIG---------SYFYFP--SLAFHKAAGGYGGI 94
V + + P + FTY V ++G + Y+ G G +
Sbjct: 498 QSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPM 557
Query: 95 KIASRPLIPVPFDPPAGD--FTIL------AGDWYKKNHTDLKAILDSGSD------LPF 140
KI + + D F + +++ + D
Sbjct: 558 KICKKGSLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTAPDQVDKEDEDFQES 617
Query: 141 PDGLVINGRG-SNANTFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHTLQ 198
+NG N T+ +G + + + + G G+ G
Sbjct: 618 NKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNT---YLWRGERR-- 672
Query: 199 NTYDSLDIHLGQSYSVLVRADQP 221
D+ ++ S ++ + D
Sbjct: 673 ---DTANLFPQTSLTLHMWPDTE 692
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 2e-11
Identities = 29/177 (16%), Positives = 56/177 (31%), Gaps = 16/177 (9%)
Query: 56 PIPPGKNFTYVLQVKDQIGSYFY---FPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGD 112
PG+ + G Y Y PS+ H G YG + + +P +
Sbjct: 237 QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLP----QVDRE 291
Query: 113 FTILAGDWYKKNHTDLKAILDSGSDLPF---PDGLVINGRGS---NANTFTVDQGKTYRF 166
F ++ G+ Y + + P+ + NG ++ G+T R
Sbjct: 292 FYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPEYFLFNGSVGSLTRSHPLYASVGETVRI 351
Query: 167 RISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS--LDIHLGQSYSVLVRADQP 221
G + + +F + G V G+ + + G + V + D+
Sbjct: 352 FFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDRA 408
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 2e-10
Identities = 41/260 (15%), Positives = 73/260 (28%), Gaps = 14/260 (5%)
Query: 47 QDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFY----FPSLAFHKAAGGYGGIKIASR--P 100
G + P ++ VL ++ + +Y A G G +
Sbjct: 85 LMGG--PARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSK 142
Query: 101 LIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQ 160
+P+P DF ++ D N + GS D L++NG S V +
Sbjct: 143 SLPIPNHYGVDDFPVIIQDKRLDNFGTP-EYNEPGSGGFVGDTLLVNGVQS--PYVEVSR 199
Query: 161 GKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHTLQ-NTYDSLDIHLGQSYSVLVRA 218
G R R+ N S ++ G + ++ + + L + G+ +LV
Sbjct: 200 GW-VRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDM 258
Query: 219 DQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRN 278
+ + + V P G + SL
Sbjct: 259 SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEI 318
Query: 279 LTASGPRPNPQGSYHYGLIN 298
+ S R IN
Sbjct: 319 MAGSPIRSRDISLGDDPGIN 338
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 58.5 bits (140), Expect = 3e-09
Identities = 36/232 (15%), Positives = 73/232 (31%), Gaps = 39/232 (16%)
Query: 21 HLVVLNFIYMAPLITLNGVQQRRNS----WQDGVYG-TNCPIPPGKNFTYVLQVKDQIG- 74
++ N I +G+ R GV + PI PG+ F Y V + G
Sbjct: 463 LIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGP 522
Query: 75 --------SYFYFP--SLAFHKAAGGYGGIKIASRPLIPVPFDPPAGD--FTILAGDWYK 122
+ +Y ++ A+G G + I + + + D IL + +
Sbjct: 523 TKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDE 582
Query: 123 KNHTDLKAILDSGSDLP------------FPDGLVINGRGSNANTFTVDQGKTYRFRISN 170
L + P ING ++ +V + + I +
Sbjct: 583 NRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILS 642
Query: 171 VGIST-SINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 221
+G T ++ G+ + + + D+L + +V + + P
Sbjct: 643 IGAQTDFLSVFFSGYT---FKHKMVYE-----DTLTLFPFSGETVFMSMENP 686
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 50.0 bits (118), Expect = 1e-06
Identities = 30/192 (15%), Positives = 53/192 (27%), Gaps = 27/192 (14%)
Query: 49 GVYGTNCPIPPGKNFTYVLQVKDQIG---------SYFYFP--SLAFHKAAGGYGGIKIA 97
+ + PG + TYV QV + G +Y Y L +G G + +
Sbjct: 121 QREKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVC 180
Query: 98 SRPLIPVPFDPPAGDFTILAG------DWYKKNHTDLKAILDSGSDLPFPDGLVINGRG- 150
+ F +L W+ + L D+ S +P +NG
Sbjct: 181 REGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN 240
Query: 151 SNANTFTVDQGKTYRFR-ISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLG 209
+ K+ + I + ++GH V SL+I
Sbjct: 241 RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTF---LVRNHRQ-----ASLEISPI 292
Query: 210 QSYSVLVRADQP 221
+
Sbjct: 293 TFLTAQTLLMDL 304
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 5e-08
Identities = 17/188 (9%), Positives = 47/188 (25%), Gaps = 31/188 (16%)
Query: 48 DGVYGTNCPIPPGKNFTYVLQVKDQIGS---------YFYFP--SLAFHKAAGGYGGIKI 96
+ + + PG+ +TY + + G + Y+ +L +G G + I
Sbjct: 105 LPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLI 164
Query: 97 ASRPLIPVPFDPPAGD--FTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN 154
+ + + ++ + + S + V
Sbjct: 165 CKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SWNQTSSLMYTVNGYVNGTMP 215
Query: 155 TFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYS 213
TV + + + + G +E ++ + S +
Sbjct: 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQV---LEQNHHKI-----SAITLVSATSTT 267
Query: 214 VLVRADQP 221
+
Sbjct: 268 ANMTVSPE 275
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 50.9 bits (121), Expect = 5e-07
Identities = 25/209 (11%), Positives = 59/209 (28%), Gaps = 20/209 (9%)
Query: 47 QDGV---YGTNCPIPPGKNF---TYVLQVKDQIGSYFY----FPSLAFHKAAGGYGGIKI 96
DG + + G F Y + + +Y + AG G I
Sbjct: 115 SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYII 174
Query: 97 ASRPLIPVPFDPPAGDFTILAGDW-YKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANT 155
+ D +L D ++ + P+ ++
Sbjct: 175 HDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETIL 234
Query: 156 -------FTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHTLQ-NTYDSLDI 206
+ + + YRFR+ N + + N + G + + +G + +S +
Sbjct: 235 VNGKVWPYLEVEPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSL 294
Query: 207 HLGQSYSVLVRADQPPQGYYIVISTRFTS 235
+ Y +++ I+ ++
Sbjct: 295 APAERYDIIIDFTAYEGESIILANSAGCG 323
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 2e-05
Identities = 31/189 (16%), Positives = 50/189 (26%), Gaps = 26/189 (13%)
Query: 56 PIPPGKNFTYVLQVKDQIGSYFY----FPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAG 111
+ PG+ T + + G + Y + +H +G G I + R + P
Sbjct: 113 QVNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLT 171
Query: 112 D---FTILAGDWYKKNHTD--LKAILDSGSDLPF---------PDGLVINGRGS---NAN 154
+ + D+Y K G P +V NG +
Sbjct: 172 YDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDH 231
Query: 155 TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS--LDIHLGQSY 212
T G+ S T + G V G D I G +
Sbjct: 232 ALTAAVGERVLVVHSQANRDTR--PHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAG 289
Query: 213 SVLVRADQP 221
+ QP
Sbjct: 290 AAFYTFRQP 298
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 2e-05
Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 25/194 (12%)
Query: 48 DGVYGTNCPIPPGKNFTYVLQVKDQIGS---------YFYFPSL--AFHKAAGGYGGIKI 96
+ + I P K +TYV + G + Y+ ++ +G G + I
Sbjct: 114 PEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLI 173
Query: 97 ASRPLIPVPFDPPAG--DFTILA------GDWYKKNHTDLKAILDSGSDLPFPDGLVING 148
+ + + P +F +L WY S + ING
Sbjct: 174 CRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAING 233
Query: 149 RGSNANTFTVDQGKTYRFRISNVGISTSI-NFRIQGHKMLLVEVEGTHTLQNTYDSLDIH 207
N + + + R + N+G S I G +L + +
Sbjct: 234 MIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQHQL-----GVWPLL 288
Query: 208 LGQSYSVLVRADQP 221
G ++ ++A +P
Sbjct: 289 PGSFKTLEMKASKP 302
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 3e-05
Identities = 27/199 (13%), Positives = 41/199 (20%), Gaps = 54/199 (27%)
Query: 47 QDGVYGTNCPIPPGKNFTYVLQVK------------DQIGSYFY------FPSLAFHKAA 88
DG + PG TY + G + Y
Sbjct: 71 SDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRN 130
Query: 89 GGYGGIKIASRPLI--PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVI 146
G YG P+I P TI+ D N
Sbjct: 131 GLYG-------PVIVRRKGDVLPDATHTIVFNDMTINNR--------------------- 162
Query: 147 NGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQN---TYDS 203
+ F G + G F + GH+ + D+
Sbjct: 163 --KPHTGPDFEATVGDRVEIVMITHG-EYYHTFHMHGHRWADNRTGILTGPDDPSRVIDN 219
Query: 204 LDIHLGQSYSVLVRADQPP 222
S+ + A +
Sbjct: 220 KITGPADSFGFQIIAGEGV 238
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 42/204 (20%), Positives = 67/204 (32%), Gaps = 29/204 (14%)
Query: 47 QDGVYGTNCP-IPPGKNFTYVLQVKDQIGSYFY----FPSLAFHKAAGGYGGIKIASRPL 101
+ G + PG+ T + + G++ Y + +H +G G + + R
Sbjct: 97 TGALGGAKLTNVNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG 155
Query: 102 IPVPFDPPAGD---FTILAGDWY-----KKNHTDLKAILDSGSDLP------FPDGLVIN 147
+ P P +TI D Y + D + +S D P +V N
Sbjct: 156 LKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFN 215
Query: 148 GR-GS--NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYD-- 202
G+ G+ AN T G+T S T + G V G D
Sbjct: 216 GKVGALTGANALTAKVGETVLLIHSQANRDTR--PHLIGGHGDWVWETGKFANPPQRDLE 273
Query: 203 SLDIHLGQSYSVLVRADQPPQGYY 226
+ I G + + L QP G Y
Sbjct: 274 TWFIRGGSAGAALYTFKQP--GVY 295
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 7e-05
Identities = 27/197 (13%), Positives = 42/197 (21%), Gaps = 50/197 (25%)
Query: 47 QDGVYGTNCPIPPGKNFTYVLQVKD------------QIGSYFY------FPSLAFHKAA 88
DG + PG TY + G + Y
Sbjct: 112 SDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRN 171
Query: 89 GGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVING 148
G YG + + R V D TI+ D N
Sbjct: 172 GLYGPVIV--RRKGDVLPDA---THTIVFNDMTINNR----------------------- 203
Query: 149 RGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY---DSLD 205
+ F G + G F + GH+ + D+
Sbjct: 204 KPHTGPDFEATVGDRVEIVMITHG-EYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKI 262
Query: 206 IHLGQSYSVLVRADQPP 222
S+ + A +
Sbjct: 263 TGPADSFGFQIIAGEGV 279
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 491 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.96 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.96 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.96 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.9 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.87 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.86 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.85 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.84 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.83 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.77 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.76 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.49 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.22 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.22 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.22 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.22 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.21 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.18 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 99.12 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 99.1 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 99.07 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 99.06 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 99.05 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.02 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.0 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.94 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.91 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 98.91 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.89 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 98.89 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 98.85 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.79 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 98.79 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 98.78 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.76 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.73 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.69 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.69 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 98.64 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.63 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 98.57 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.56 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.52 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.51 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.5 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.49 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 98.46 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.46 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 98.45 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.44 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.42 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.41 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.35 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.35 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.34 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 98.34 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.32 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 98.24 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.23 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.22 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.21 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.15 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.13 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.1 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 98.03 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 98.0 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 97.93 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.89 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 97.89 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.89 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.86 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 97.86 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 97.85 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 97.82 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 97.62 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 97.6 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 97.6 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 97.45 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 97.44 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 97.4 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 97.33 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.32 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.29 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 97.28 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 97.16 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 96.56 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 96.42 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 96.41 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 96.27 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 96.17 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 95.9 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.88 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.81 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 95.57 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 95.13 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 94.95 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 94.78 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 94.58 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 94.15 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 92.56 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 88.43 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-95 Score=777.13 Aligned_cols=466 Identities=27% Similarity=0.481 Sum_probs=366.0
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
-.++..+||+||+ ||+|+|+|+|+|+ ++|+|||||+++.+++|+||+++ |||+|+||++|+|+|++ +++||||||
T Consensus 26 ~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~-~~~GT~wYH 104 (552)
T 1aoz_A 26 GINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYH 104 (552)
T ss_dssp EETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEE
T ss_pred EECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEEC-CCCEEEEEE
Confidence 3467778888887 4889999999998 99999999999999999999999 99999999999999999 799999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcC--CCCCCCceEEEcCcCCC-----
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG--SDLPFPDGLVINGRGSN----- 152 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~vNG~~~~----- 152 (491)
||.+.|+++||+|+|||++++....++ .+|+|++|+|+||++++..++...+... .....++.++|||+...
T Consensus 105 sH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~ 183 (552)
T 1aoz_A 105 GHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIA 183 (552)
T ss_dssp ECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTT
T ss_pred ECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccC
Confidence 999999999999999999986544555 4578999999999999876654333321 12245789999999832
Q ss_pred -------------------cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEE
Q 011178 153 -------------------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYS 213 (491)
Q Consensus 153 -------------------~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~d 213 (491)
.+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+||||||
T Consensus 184 ~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~d 263 (552)
T 1aoz_A 184 AKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYS 263 (552)
T ss_dssp GGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEE
T ss_pred cccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEE
Confidence 0179999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEe-CCCCcceEEEEEeecc-CCCcceEEEEEecCCCCCC--CCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCC
Q 011178 214 VLVRA-DQPPQGYYIVISTRFT-SQVLSATSVLHYSNSAGSV--SGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNP 288 (491)
Q Consensus 214 v~v~~-~~~~g~~~i~~~~~~~-~~~~~~~ail~y~~~~~~~--~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p 288 (491)
|+|++ ++.+|+|||++....+ .......|+|+|.++.... ..+.|..|. .+.+.... ..+. .+....+.+.|
T Consensus 264 vlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~--~~l~-~l~~~~~~~~~ 340 (552)
T 1aoz_A 264 VLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKN--FTYR-ITAAMGSPKPP 340 (552)
T ss_dssp EEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHH--HHTT-CCBCTTCCCCC
T ss_pred EEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccccccccc--cccc-ccccCCCCCCC
Confidence 99999 5567999999987643 2345678999998765311 111222221 11110000 0010 11110011111
Q ss_pred CCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCC---------CC-CCCCc
Q 011178 289 QGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD---------NP-TGGGA 358 (491)
Q Consensus 289 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~---------~p-~~~~~ 358 (491)
...++++.+.......++...|+|||++|..+..|+|.+.+.++++.|+.+.... .+ .....
T Consensus 341 --------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~ 412 (552)
T 1aoz_A 341 --------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKT 412 (552)
T ss_dssp --------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTC
T ss_pred --------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccc
Confidence 2356777766533223456789999999998899998877766666655332211 01 12244
Q ss_pred ceeeeEEeecCCcEEEEEEEcCCC------CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEE
Q 011178 359 YLQTSVMAADFRGFAEVVFENPED------TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTA 432 (491)
Q Consensus 359 ~~~~~~~~~~~g~~v~~~i~N~~~------~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~ 432 (491)
+.++.++.++.|++|+|+|+|.+. +.||||||||+||||+++.|.|++.....+|+.+|.|||||.|++++|++
T Consensus 413 ~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~ 492 (552)
T 1aoz_A 413 RIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTA 492 (552)
T ss_dssp EEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEE
T ss_pred cccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEE
Confidence 567788999999999999999874 45999999999999999989988744556889999999999999999999
Q ss_pred EEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcchhccccc
Q 011178 433 VYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAV 487 (491)
Q Consensus 433 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~ 487 (491)
|||+|||||.|+|||||++|++.|||+.|.+... + .+++|+++++|+.++
T Consensus 493 Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~----~~~~P~~~~~C~~~~ 542 (552)
T 1aoz_A 493 IRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-K----VGRIPTKALACGGTA 542 (552)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-G----CCCCCHHHHSSHHHH
T ss_pred EEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-h----hccCCcchhhhhccC
Confidence 9999999999999999999999999999987543 3 366899999999875
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-91 Score=739.15 Aligned_cols=441 Identities=22% Similarity=0.306 Sum_probs=343.9
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
..++..|||+|++ ||+|+|+|+|+|+ ++|+|||||++|.+++||||+++ |||||+||++|+|+|++. |+||||||
T Consensus 90 ~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~~-q~GT~WYH 168 (580)
T 3sqr_A 90 TFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYH 168 (580)
T ss_dssp EETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECC-CCEEEEEE
T ss_pred EECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEEECC-CCcceEEe
Confidence 3467788899887 4889999999998 89999999999999999999999 999999999999999995 89999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcc-eEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC------
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDF-TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN------ 152 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~------ 152 (491)
||.+.|+++||+|+|||++++. .+| |.|+ +|+|+||+++...++...+.. ...+.+++++|||+...
T Consensus 169 sH~~~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~~~-~~~~~~d~~liNG~~~~~c~~~~ 242 (580)
T 3sqr_A 169 SHFSLQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTARL-GAPPALENTLMNGTNTFDCSAST 242 (580)
T ss_dssp ECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHHTT-SCCCCBSEEEETTBCCCCCTTCC
T ss_pred ecccccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHHhc-cCCCCCceEEECCcccCCCcccc
Confidence 9999999999999999998753 234 7887 999999999988776544433 23678899999999741
Q ss_pred ---------cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCc
Q 011178 153 ---------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQ 223 (491)
Q Consensus 153 ---------~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g 223 (491)
.++++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++++|
T Consensus 243 ~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g 322 (580)
T 3sqr_A 243 DPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAAD 322 (580)
T ss_dssp CTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSS
T ss_pred ccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCC
Confidence 37999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred ceEEEEEeeccC----CCcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 224 GYYIVISTRFTS----QVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 224 ~~~i~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
+|||++...... ......|||+|.++... .|..+. ...+..++ .....|.+..+.+.|. .
T Consensus 323 ~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~~~~~~---~~~~~L~P~~~~~~~~--------~ 387 (580)
T 3sqr_A 323 NYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPRGTCED---EPVASLVPHLALDVGG--------Y 387 (580)
T ss_dssp EEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCCCCSCC---SCGGGCCBSSCCBCCS--------E
T ss_pred eEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCccchhhc---ccccccccCCCCCCCC--------c
Confidence 999999875421 12367999999865421 111111 00000000 0001233332222221 1
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeee-CCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeec----CCcEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFI-PADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAAD----FRGFA 373 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~-~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~g~~v 373 (491)
.+.++.+... .++...|+|||.+|. ++..|.|.+.+.+ . ...|. ..+++.++ .|++|
T Consensus 388 ~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g---~------~~~~~------~~~~~~~~~~~~~~~~V 449 (580)
T 3sqr_A 388 SLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNN---E------TIFPT------EYNVVALEQTNANEEWV 449 (580)
T ss_dssp EEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTT---C------CCCCG------GGCEEEECC----CCEE
T ss_pred cceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcC---C------ccCCC------CcceeecccccCCCcEE
Confidence 2333333321 245689999999997 5678887654321 0 11121 23444554 69999
Q ss_pred EEEEEcCC--CCCCceeccCCCeEEEeeccCCCCCCC-CCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecch
Q 011178 374 EVVFENPE--DTLQSWHIDGHNFFAVGMDGGEWTPAS-RLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENW 450 (491)
Q Consensus 374 ~~~i~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~-~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil 450 (491)
||+|+|.+ .+.||||||||+||||++|.|.|+++. ...+|+.||++|||+.|++++|++|||++||||.|+|||||+
T Consensus 450 eiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~ 529 (580)
T 3sqr_A 450 VYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIA 529 (580)
T ss_dssp EEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSH
T ss_pred EEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcH
Confidence 99999987 788999999999999999999998653 367899999999999999999999999999999999999999
Q ss_pred hhhhcceEEEEEEecCCccCccCCCCCCc-chhcccc
Q 011178 451 ARQYLGQQFYLRVYSSANSWRDEYPIPSN-ALLCGRA 486 (491)
Q Consensus 451 ~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 486 (491)
+|++.||++.|.+ .++++ ++..++|++ ...|..+
T Consensus 530 ~H~~~Gm~~~~~e-~~~~i-~~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 530 WHASEGLAMQFVE-SQSSI-AVKMTDTAIFEDTCANW 564 (580)
T ss_dssp HHHHTTCEEEEEE-SGGGC-CCCHHHHHHHHHHHHHH
T ss_pred HHhhCCCcEEEEE-CHHHH-hhccCCcHHHHHhhHHH
Confidence 9999999999976 44443 222236665 4588654
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-91 Score=736.13 Aligned_cols=447 Identities=23% Similarity=0.308 Sum_probs=344.9
Q ss_pred CCcccCCCCeEEEe--eeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 4 MNHFSSLGCSLITH--LYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 4 ~~~~~~~G~~l~v~--d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
..++..+||+|++. |+|+|+|+|+|+ ++|+|||||++|++++||||+++ |||+|+||++|+|+|++++++||||||
T Consensus 26 ~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH 105 (534)
T 1zpu_A 26 TCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYH 105 (534)
T ss_dssp EETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEE
T ss_pred EECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEE
Confidence 34677889999874 899999999999 99999999999999999999999 999999999999999997799999999
Q ss_pred CCccccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHH-hc---CCCCCCCceEEEcCcCCCcce
Q 011178 80 PSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAIL-DS---GSDLPFPDGLVINGRGSNANT 155 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~-~~---~~~~~~~~~~~vNG~~~~~~~ 155 (491)
||.+.|+++||+|+|||++++. ++ .+|+|++|+|+||+++...++...+ .. .+..+.++.+||||+. .++
T Consensus 106 ~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~--~~~ 179 (534)
T 1zpu_A 106 SHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTM--NLT 179 (534)
T ss_dssp CCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBS--SCE
T ss_pred EcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCC--ceE
Confidence 9999999999999999999753 33 4589999999999999887764322 21 2345678999999999 899
Q ss_pred EEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCC-CcceEEEEEeecc
Q 011178 156 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP-PQGYYIVISTRFT 234 (491)
Q Consensus 156 ~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~-~g~~~i~~~~~~~ 234 (491)
++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++. .++|||++.....
T Consensus 180 ~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~ 259 (534)
T 1zpu_A 180 WEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDT 259 (534)
T ss_dssp EECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGG
T ss_pred EEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEecccc
Confidence 999999999999999999999999999999999999999999999999999999999999999864 4789999876432
Q ss_pred -------CCCcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEe
Q 011178 235 -------SQVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQ 306 (491)
Q Consensus 235 -------~~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~ 306 (491)
.......++|+|.++... |..+. ..+...+. . ..+.+....+.+ ..+++++.+.
T Consensus 260 ~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~~~~~~~~---~--~~l~p~~~~~~~--------~~~~~~~~l~ 321 (534)
T 1zpu_A 260 MLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNFLD---D--FYLQPYEKEAIY--------GEPDHVITVD 321 (534)
T ss_dssp GSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCSCSSCSCC---G--GGCCBSSCCCCC--------CSCSEEEEEE
T ss_pred ccccCCCCCCcceEEEEEeCCCCCC-----CCCCcccccccccc---c--ccceeCCCCCCC--------CCCCeEEEEE
Confidence 113456799999875421 11100 00000000 0 012221111111 1345666665
Q ss_pred cccc-CcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCCC
Q 011178 307 NTAP-TINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQ 385 (491)
Q Consensus 307 ~~~~-~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~H 385 (491)
.... ..++...|+|||++|..+..|.+.+.+.. +.+.. .+. ....++.++.++.|++|+|+|+|.+.+.|
T Consensus 322 ~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~~-----~~~--~~~~~~~~~~~~~g~~v~ivi~N~~~~~H 392 (534)
T 1zpu_A 322 VVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQAN-----NSE--IYGSNTHTFILEKDEIVEIVLNNQDTGTH 392 (534)
T ss_dssp EEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGTT-----CGG--GGCSSSCEEEECTTCEEEEEEEECSSSCE
T ss_pred EEeeccCCceeEEEECCCcccCCCCCceeeeccc--CcccC-----CCc--ccCCCceEEEeCCCCEEEEEEeCCCCCCC
Confidence 4321 12455689999999998888987654421 11110 111 11123567889999999999999998999
Q ss_pred ceeccCCCeEEEeeccC----------CCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhc
Q 011178 386 SWHIDGHNFFAVGMDGG----------EWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYL 455 (491)
Q Consensus 386 P~HlHG~~F~Vl~~g~g----------~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~ 455 (491)
|||||||+||||+++.+ .|++.....+ ..+|.|||||.|++++|++|||+|||||.|+|||||++|++.
T Consensus 393 P~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~ 471 (534)
T 1zpu_A 393 PFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQ 471 (534)
T ss_dssp EEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHT
T ss_pred CeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhc
Confidence 99999999999999864 4444322222 468999999999999999999999999999999999999999
Q ss_pred ceEEEEEEecCCccCccC--CCCCCc-chhcccc
Q 011178 456 GQQFYLRVYSSANSWRDE--YPIPSN-ALLCGRA 486 (491)
Q Consensus 456 GMm~~~~V~~~~~~~~~~--~~~p~~-~~~c~~~ 486 (491)
|||+.|.+.. +++ ++. .++|++ ...|..+
T Consensus 472 GM~~~~~~~~-~~~-~~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 472 GLGLVLVEDP-FGI-QDAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp TCEEEEEECH-HHH-HHCGGGSCCHHHHHHHHHT
T ss_pred CCeEEEEECc-ccc-ccccccCCChhHhhhhhcc
Confidence 9999998754 332 233 566765 4566544
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-90 Score=720.44 Aligned_cols=441 Identities=22% Similarity=0.317 Sum_probs=336.9
Q ss_pred CCcccCCCCeEEEe--eeEEEEEEecCCC-----CCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccc
Q 011178 4 MNHFSSLGCSLITH--LYTHLVVLNFIYM-----APLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGS 75 (491)
Q Consensus 4 ~~~~~~~G~~l~v~--d~v~i~~~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt 75 (491)
..++..|||+||+. |+|+|+|+|+|++ +|||||||++|.+++||||+++ |||+|+||++|+|+|++++++||
T Consensus 27 ~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT 106 (495)
T 3t6v_A 27 NAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGT 106 (495)
T ss_dssp EETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEE
T ss_pred EECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCce
Confidence 35678899999874 8999999999985 7999999999999999999999 99999999999999999879999
Q ss_pred eeEeCCccccccCCceeEEEEecCCCC-CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC---
Q 011178 76 YFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS--- 151 (491)
Q Consensus 76 ~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~--- 151 (491)
||||||.+.|+++||+|+|||+++++. ..+|+..++|++|+|+||+++....+ .+..+..+|+++|||+++
T Consensus 107 ~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-----~~~~p~~~d~~liNG~g~~~~ 181 (495)
T 3t6v_A 107 YWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM-----GAGGAITADSTLIDGLGRTHV 181 (495)
T ss_dssp EEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS-----CSSSCCCCSEEEETTBCCBSS
T ss_pred eeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh-----ccCCCCCCcEEEECCcCcCCC
Confidence 999999999999999999999986541 12343335678999999999876432 122344789999999863
Q ss_pred -----CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceE
Q 011178 152 -----NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYY 226 (491)
Q Consensus 152 -----~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~ 226 (491)
..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++++|+||
T Consensus 182 ~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~ 261 (495)
T 3t6v_A 182 NVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYW 261 (495)
T ss_dssp SCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEE
T ss_pred CcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEE
Confidence 247899999999999999999999999999999999999999999999999999999999999999998789999
Q ss_pred EEEEeeccCC---CcceEEEEEecCCCCCCCCCCCCC-CCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceE
Q 011178 227 IVISTRFTSQ---VLSATSVLHYSNSAGSVSGPPPGG-PTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHT 302 (491)
Q Consensus 227 i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~-p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 302 (491)
|++....... .....|+|+|.++....+...+.. +..+.+ +.+|.+....+.|... . ....+++
T Consensus 262 i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~---------~~~L~p~~~~~~p~~~-~--~~~~d~~ 329 (495)
T 3t6v_A 262 IRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLI---------ETDLHPLSRNGVPGNP-H--QGGADCN 329 (495)
T ss_dssp EEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCC---------GGGCCBSSCCCCSSCS-S--TTCSSEE
T ss_pred EEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccc---------cccccccccccCCCcc-C--CCCCcEE
Confidence 9998643222 123579999987642211100000 001100 1123332222112100 0 0124566
Q ss_pred EEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE-cCC
Q 011178 303 IRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE-NPE 381 (491)
Q Consensus 303 ~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~-N~~ 381 (491)
+.+.... ++ ..|+|||++|..+..|+|.+.+. +.++.. .......++.++.|++|+|+|+ |..
T Consensus 330 ~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~~~v~~~~~g~~V~ivl~~n~~ 393 (495)
T 3t6v_A 330 LNLSLGF---AC-GNFVINGVSFTPPTVPVLLQICS---GANTAA---------DLLPSGSVISLPSNSTIEIALPAGAA 393 (495)
T ss_dssp EECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST---------TSSSTTSEEEECTTCEEEEEEECCSS
T ss_pred EEEEEEe---cC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc---------cccCCcceEEecCCCEEEEEEccCCC
Confidence 6554421 12 37999999999888898766542 211110 0011245788999999999998 667
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCC-CCEEEEEEEccCcceeeeeecchhhhhcceEEE
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYP-KSWTAVYVPLDNVGMWNIRSENWARQYLGQQFY 460 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p-~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~ 460 (491)
.+.||||||||+|+||++++. ..+|+.+|.||||+.|++ |+|++|||+|||||.|+|||||++|++.|||+.
T Consensus 394 ~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~ 466 (495)
T 3t6v_A 394 GGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIV 466 (495)
T ss_dssp SCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEE
T ss_pred CCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEE
Confidence 788999999999999987532 247889999999999997 899999999999999999999999999999999
Q ss_pred EEEecCCccCccCCCCCCc-chhcccc
Q 011178 461 LRVYSSANSWRDEYPIPSN-ALLCGRA 486 (491)
Q Consensus 461 ~~V~~~~~~~~~~~~~p~~-~~~c~~~ 486 (491)
|. +.++++ ++..++|++ ..+|..+
T Consensus 467 ~~-e~~~~~-~~~~~~p~~~~~~C~~~ 491 (495)
T 3t6v_A 467 FA-EDIPNT-ASANPVPEAWSNLCPSY 491 (495)
T ss_dssp EE-ETHHHH-HHHCCCCHHHHHHHHHH
T ss_pred EE-EChhHh-ccccCCCHHHHHHhhHh
Confidence 95 455543 333456765 5689655
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-89 Score=717.77 Aligned_cols=441 Identities=22% Similarity=0.345 Sum_probs=337.2
Q ss_pred CCcccCCCCeEEEe--eeEEEEEEecCCC-----CCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccc
Q 011178 4 MNHFSSLGCSLITH--LYTHLVVLNFIYM-----APLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGS 75 (491)
Q Consensus 4 ~~~~~~~G~~l~v~--d~v~i~~~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt 75 (491)
..++..+||+||+. |+|+|+|+|+|++ +|||||||++|.+++||||+++ |||+|+||++|+|+|++++++||
T Consensus 26 ~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT 105 (499)
T 3pxl_A 26 VVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGT 105 (499)
T ss_dssp EETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEE
T ss_pred EECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCce
Confidence 35678889999874 8899999999985 7999999999999999999999 99999999999999999878999
Q ss_pred eeEeCCccccccCCceeEEEEecCCCC-CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC---
Q 011178 76 YFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS--- 151 (491)
Q Consensus 76 ~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~--- 151 (491)
||||||.+.|+++||+|+|||+++++. ..+|+..++|++|+|+||+++.... .+..+..+|+++|||+++
T Consensus 106 ~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~------~~~~p~~~d~~liNG~~~~~~ 179 (499)
T 3pxl_A 106 FWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL------GPRFPGGADATLINGKGRAPS 179 (499)
T ss_dssp EEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCCTT
T ss_pred eeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc------ccCCCCCCcEEEECCCCcCCC
Confidence 999999999999999999999986531 1234333567899999999986532 122344789999999863
Q ss_pred ----CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEE
Q 011178 152 ----NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYI 227 (491)
Q Consensus 152 ----~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i 227 (491)
..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++++|+|||
T Consensus 180 ~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i 259 (499)
T 3pxl_A 180 DSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWI 259 (499)
T ss_dssp CTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEE
T ss_pred CCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEE
Confidence 2579999999999999999999999999999999999999999999999999999999999999999987899999
Q ss_pred EEEeeccCC---CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEE
Q 011178 228 VISTRFTSQ---VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIR 304 (491)
Q Consensus 228 ~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 304 (491)
++....... .....|+|+|.++....+...+..+....+ +.+|.+....+.|.... ....++++.
T Consensus 260 ~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~---------~~~L~p~~~~~~p~~~~---~~~~d~~~~ 327 (499)
T 3pxl_A 260 RANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVKPLN---------EVDLHPLVSTPVPGAPS---SGGVDKAIN 327 (499)
T ss_dssp EEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSSBCC---------GGGCCBSSCCCCSSCSS---TTCSSEEEE
T ss_pred EEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCcccc---------cccccccccccCCCccc---CCCCcEEEE
Confidence 998643222 123579999987642111100000001100 11233332222221100 013456666
Q ss_pred EeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE---cCC
Q 011178 305 LQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE---NPE 381 (491)
Q Consensus 305 l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~---N~~ 381 (491)
+.... ++ ..|+|||++|..++.|+|++.+. +..... .......++.++.|++|+|+|+ |..
T Consensus 328 l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~~~v~~~~~g~~V~ivl~~~~n~~ 391 (499)
T 3pxl_A 328 MAFNF---NG-SNFFINGASFVPPTVPVLLQILS---GAQTAQ---------DLLPSGSVYVLPSNASIEISFPATAAAP 391 (499)
T ss_dssp CCEEE---CS-SCEEETTBCCCCCSSCHHHHHHT---TCCSTT---------TSSSTTSEEEECTTCEEEEEEECCTTSC
T ss_pred EEEEe---cC-cEEEEcCEecCCCCCchhhhhhc---CCcccc---------ccCCCceeEEecCCCEEEEEEecCcccC
Confidence 55421 22 37999999999888998766542 211100 0011245788999999999999 566
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCC---CCEEEEEEEccCcceeeeeecchhhhhcceE
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYP---KSWTAVYVPLDNVGMWNIRSENWARQYLGQQ 458 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p---~~~~~irf~adnpG~w~~HCHil~H~d~GMm 458 (491)
.+.||||||||+|+||++++. ..+|+.+|.||||+.|++ ++|++|||+|||||.|+|||||++|++.|||
T Consensus 392 ~~~HP~HLHGh~F~Vl~~~g~-------~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~ 464 (499)
T 3pxl_A 392 GAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFA 464 (499)
T ss_dssp SCSCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCE
T ss_pred CCCccceecCCcEEEEeccCC-------cccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCc
Confidence 778999999999999987431 247889999999999997 9999999999999999999999999999999
Q ss_pred EEEEEecCCccCccCCCCCCc-chhccccc
Q 011178 459 FYLRVYSSANSWRDEYPIPSN-ALLCGRAV 487 (491)
Q Consensus 459 ~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 487 (491)
+.|. +.++++ ++...+|++ ...|..+.
T Consensus 465 ~~~~-e~~~~~-~~~~~~p~~~~~~C~~~~ 492 (499)
T 3pxl_A 465 VVMA-EDTPDV-KAVNPVPQAWSDLCPTYD 492 (499)
T ss_dssp EEEE-ESGGGH-HHHSCCCHHHHTHHHHHH
T ss_pred EEEE-EChhHh-ccccCCCHHHHHhhhHhh
Confidence 9994 555553 333456765 56897654
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-89 Score=727.03 Aligned_cols=445 Identities=23% Similarity=0.310 Sum_probs=339.5
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC-----CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCcc
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY-----MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIG 74 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~-----~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~G 74 (491)
|-.++..+||+||+. |+|+|+|+|+|+ ++|||||||+++++++|+||+++ |||+|+||++|+|+|++.+++|
T Consensus 46 ~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~G 125 (521)
T 1v10_A 46 VTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAG 125 (521)
T ss_dssp EEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCE
T ss_pred EEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCc
Confidence 445678899999874 899999999999 99999999999999999999999 9999999999999999767999
Q ss_pred ceeEeCCccccccCCceeEEEEecCCCC-CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC-
Q 011178 75 SYFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN- 152 (491)
Q Consensus 75 t~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~- 152 (491)
|||||||.+.|+++||+|+|||+++++. +.+|+..++|++|+|+||+++...++.. ..+...+.+|+++|||+...
T Consensus 126 T~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~--~~~~~~~~~d~~liNG~~~~~ 203 (521)
T 1v10_A 126 TYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNS 203 (521)
T ss_dssp EEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCS
T ss_pred cEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHHhh--ccCCCCCCCCEEEECCcccCC
Confidence 9999999999999999999999987531 2234333479999999999998766532 22234567899999999831
Q ss_pred -------cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcce
Q 011178 153 -------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGY 225 (491)
Q Consensus 153 -------~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~ 225 (491)
.+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..++++.|+|||||||+|++++.+|+|
T Consensus 204 ~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y 283 (521)
T 1v10_A 204 ANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNY 283 (521)
T ss_dssp SCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEE
T ss_pred CCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCce
Confidence 1899999999999999999999999999999999999999999999999999999999999999999878999
Q ss_pred EEEEEeeccCC---CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceE
Q 011178 226 YIVISTRFTSQ---VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHT 302 (491)
Q Consensus 226 ~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 302 (491)
||++....... .....++|+|.+.....+...+. +..+.+ ..+|.+....+.|..... ...+++
T Consensus 284 ~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~~~~~---------~~~l~p~~~~~~p~~~~~---~~~~~~ 350 (521)
T 1v10_A 284 WIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SGTALN---------EANLIPLINPGAPGNPVP---GGADIN 350 (521)
T ss_dssp EEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CSCBCC---------GGGCCBSSCCCCSSCSST---TCSSEE
T ss_pred eeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cccccc---------hhhcccCCcccCCCcccC---CcceEE
Confidence 99998653211 12346999998764321111000 001111 012222222222211000 123455
Q ss_pred EEEeccccCcCCe-EeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC
Q 011178 303 IRLQNTAPTINGK-QRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381 (491)
Q Consensus 303 ~~l~~~~~~~~~~-~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~ 381 (491)
+.+... .++. ..|+|||++|..+..|++.+.+. +.++.. ..+.+..++.++.|++|+|+++|
T Consensus 351 ~~l~~~---~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~N-- 413 (521)
T 1v10_A 351 LNLRIG---RNATTADFTINGAPFIPPTVPVLLQILS---GVTNPN---------DLLPGGAVISLPANQVIEISIPG-- 413 (521)
T ss_dssp EECCEE---CCSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCGG---------GSSSTTTEEEECTTCEEEEEEEC--
T ss_pred EEEEEe---cCCceeEEEECCCcccCCCCchhhhhhc---CCcccc---------cCCCCceEEEecCCCEEEEEEcC--
Confidence 555431 1222 47999999998877887765432 111100 01123567889999999999999
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEe-CCCCEEEEEEEccCcceeeeeecchhhhhcceEEE
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQV-YPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFY 460 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v-~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~ 460 (491)
.+.||||||||+||||+++.+. .+|+.+|.|||||.| ++++|++|||+|||||.|+|||||++|++.|||+.
T Consensus 414 ~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~ 486 (521)
T 1v10_A 414 GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVV 486 (521)
T ss_dssp CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEE
T ss_pred CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEE
Confidence 6889999999999999997653 267889999999999 89999999999999999999999999999999999
Q ss_pred EEEecCCccCccCCCCCC-cchhcccccC
Q 011178 461 LRVYSSANSWRDEYPIPS-NALLCGRAVG 488 (491)
Q Consensus 461 ~~V~~~~~~~~~~~~~p~-~~~~c~~~~~ 488 (491)
|.|...+ . .+..++|+ +.++|..+..
T Consensus 487 ~~v~~~~-~-~~~~~~p~~~~~~C~~~~~ 513 (521)
T 1v10_A 487 FAEDIPN-I-PIANAISPAWDDLCPKYNA 513 (521)
T ss_dssp EEESGGG-H-HHHSCCCHHHHTHHHHHTT
T ss_pred EEECCcc-h-hhccCCChHHhhhchhhhc
Confidence 9886443 2 23445664 5889987764
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-89 Score=720.66 Aligned_cols=440 Identities=24% Similarity=0.362 Sum_probs=336.9
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC-----CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCcc
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY-----MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIG 74 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~-----~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~G 74 (491)
|-.++.. ||+||+. |+|+|+|+|+|+ ++|||||||+++++++++||+++ +||+|+||++|+|+|++.+++|
T Consensus 26 ~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~G 104 (503)
T 1hfu_A 26 ILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAG 104 (503)
T ss_dssp EEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCE
T ss_pred EEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCc
Confidence 3456677 9999984 899999999999 99999999999999999999999 9999999999999999767999
Q ss_pred ceeEeCCccccccCCceeEEEEecCCCC-CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC--
Q 011178 75 SYFYFPSLAFHKAAGGYGGIKIASRPLI-PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS-- 151 (491)
Q Consensus 75 t~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~-- 151 (491)
|||||||.+.|+++||+|+|||+++++. +.+|+..++|++|+|+||+++...++.. .+.+++++|||+..
T Consensus 105 T~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~-------~~~~d~~liNG~~~~~ 177 (503)
T 1hfu_A 105 TFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG-------AAQPDATLINGKGRYV 177 (503)
T ss_dssp EEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----------CCSEEEETTBCCBT
T ss_pred cEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC-------CCCCCEEEECcccccC
Confidence 9999999999999999999999986531 2334333479999999999998765421 15689999999983
Q ss_pred -----CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceE
Q 011178 152 -----NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYY 226 (491)
Q Consensus 152 -----~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~ 226 (491)
..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++.+|+||
T Consensus 178 ~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~ 257 (503)
T 1hfu_A 178 GGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYW 257 (503)
T ss_dssp TCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEE
T ss_pred CCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCcccee
Confidence 128999999999999999999999999999999999999999999999999999999999999999998789999
Q ss_pred EEEEeeccCC-------CcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 227 IVISTRFTSQ-------VLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 227 i~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
|++....... .....++|+|.++....+.. +..|. .+++ ..+|.+....+.|..... ..
T Consensus 258 i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~~~l~---------~~~l~p~~~~~~p~~~~~---~~ 324 (503)
T 1hfu_A 258 IRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNPAQLN---------EADLHALIDPAAPGIPTP---GA 324 (503)
T ss_dssp EEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSCCBCC---------GGGCBBSSSCSCSSCSST---TC
T ss_pred eeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCccCCCc---------cccccccCccCCCCcccC---Cc
Confidence 9997653211 12346999998764321110 00111 1111 012222222222211000 12
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
.++++.+... .++. .|+|||++|..+..|++.+.+. +.++.. ..+.+..++.++.|++|+|+++
T Consensus 325 ~~~~~~l~~~---~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~ 388 (503)
T 1hfu_A 325 ADVNLRFQLG---FSGG-RFTINGTAYESPSVPTLLQIMS---GAQSAN---------DLLPAGSVYELPRNQVVELVVP 388 (503)
T ss_dssp SSEEEECCEE---EETT-EEEETTBCCCCCSSCHHHHHHT---TCCSGG---------GSSSTTSEEEECSSCEEEEEEE
T ss_pred ceEEEEEEee---ccCc-eEEECCCccCCCCCcchhhhhc---CCcccc---------cCCCCceEEEccCCCEEEEEEE
Confidence 3445544321 1122 7999999998877887765432 111100 1112356788999999999999
Q ss_pred c-CCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEe-CCCCEEEEEEEccCcceeeeeecchhhhhcc
Q 011178 379 N-PEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQV-YPKSWTAVYVPLDNVGMWNIRSENWARQYLG 456 (491)
Q Consensus 379 N-~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v-~p~~~~~irf~adnpG~w~~HCHil~H~d~G 456 (491)
| .+.+.||||||||+||||+++.+. .+++.+|.|||||.| ++++|++|||+|||||.|+|||||++|++.|
T Consensus 389 ~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~G 461 (503)
T 1hfu_A 389 AGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNG 461 (503)
T ss_dssp CCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTT
T ss_pred CCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCC
Confidence 4 557889999999999999997653 257889999999999 8999999999999999999999999999999
Q ss_pred eEEEEEEecCCccCccCCCCCC-cchhcccccC
Q 011178 457 QQFYLRVYSSANSWRDEYPIPS-NALLCGRAVG 488 (491)
Q Consensus 457 Mm~~~~V~~~~~~~~~~~~~p~-~~~~c~~~~~ 488 (491)
||+.|.|...+ + .+..++|. +.++|..+..
T Consensus 462 M~~~~~v~~~~-~-~~~~~~p~~~~~~C~~~~~ 492 (503)
T 1hfu_A 462 LAIVFAEDMAN-T-VDANNPPVEWAQLCEIYDD 492 (503)
T ss_dssp CEEEEEECHHH-H-HHHCCCCHHHHHHHHHHHT
T ss_pred CeEEEEECchh-h-hhccCCChHHhhhccchhh
Confidence 99999886443 2 23345674 5789987754
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-88 Score=717.88 Aligned_cols=449 Identities=21% Similarity=0.321 Sum_probs=339.9
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecC-CCCCeeeecccCCCCCCCCCCCCC-CCCCCCC-CCeEEEEEEeCCCcccee
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFI-YMAPLITLNGVQQRRNSWQDGVYG-TNCPIPP-GKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l-~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~P-G~~~~Y~f~~~~~~Gt~w 77 (491)
|-.++..+||+||+ ||+|+|+|+|+| +++|||||||++++++++|||+++ +||+|+| |++|+|+|++ .++||||
T Consensus 58 ~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~w 136 (559)
T 2q9o_A 58 MLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSW 136 (559)
T ss_dssp EEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEEC-CSCEEEE
T ss_pred EEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEEC-CCCEEEE
Confidence 34567789999987 489999999999 689999999999999999999999 9999999 9999999999 4899999
Q ss_pred EeCCccccccCCceeEEEEecCCCCCCCCCCCCCcc-eEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC----
Q 011178 78 YFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDF-TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN---- 152 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~---- 152 (491)
||||.+.|+++||+|+|||++++. .+ +|.|+ +|+|+||+++...++..... ....+.+++++|||+...
T Consensus 137 YH~H~~~q~~~Gl~G~liV~~~~~--~~---~d~d~~~l~l~Dw~~~~~~~~~~~~~-~~~~~~~d~~liNG~~~~~~~~ 210 (559)
T 2q9o_A 137 YHSHFSAQYGNGVVGTIQINGPAS--LP---YDIDLGVFPITDYYYRAADDLVHFTQ-NNAPPFSDNVLINGTAVNPNTG 210 (559)
T ss_dssp EEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHHHHHHT-TSCCCCBSEEEETTBCBCTTTC
T ss_pred EEEcccchhcCCceEEEEecCCCc--CC---CcccceEEEEeccccCCHHHHhhhhh-cCCCCccceeEECCccccCcCC
Confidence 999999999999999999998753 23 47887 99999999998877643222 234567899999999842
Q ss_pred ---cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEE
Q 011178 153 ---ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVI 229 (491)
Q Consensus 153 ---~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~ 229 (491)
.+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++.+|+|||++
T Consensus 211 ~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a 290 (559)
T 2q9o_A 211 EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNV 290 (559)
T ss_dssp CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEE
T ss_pred CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999998789999999
Q ss_pred Ee--ec---cCCCcceEEEEEecCCCCCCCCCCCCCCC-ccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEE
Q 011178 230 ST--RF---TSQVLSATSVLHYSNSAGSVSGPPPGGPT-TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTI 303 (491)
Q Consensus 230 ~~--~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~ 303 (491)
.. .. ........++|+|.++... +|..+. ...+ . .+.. ...|.+..+.+.|..... ...++++
T Consensus 291 ~~~~~~~~~~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~--~-~~~~-~~~l~p~~~~~~p~~~~~---~~~~~~~ 359 (559)
T 2q9o_A 291 TFGGQAACGGSLNPHPAAIFHYAGAPGG----LPTDEGTPPVD--H-QCLD-TLDVRPVVPRSVPVNSFV---KRPDNTL 359 (559)
T ss_dssp ECCGGGTTCCBSSSCCEEEEEETTSCCS----CCCCCCCCCCC--C-TTCC-CSCCCBSSCCBCCCTTCC---CCGGGEE
T ss_pred EeccccccCCCCCCceeEEEEECCCCCC----CCCCCCCcCCC--c-cccc-ccccccCCCCCCCCcccc---cceeEEE
Confidence 86 21 1123356899999876421 111110 0000 0 0000 012222222212221110 1123445
Q ss_pred EEeccccCcCCeEeEEEcCeeeeC-CCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecC-CcEEEEEEEcCC
Q 011178 304 RLQNTAPTINGKQRYAVNSVSFIP-ADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADF-RGFAEVVFENPE 381 (491)
Q Consensus 304 ~l~~~~~~~~~~~~~~iNg~~f~~-~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-g~~v~~~i~N~~ 381 (491)
.+.... ...+...|+|||++|.. +..|++.+.+.+. ...| .+..++.++. +++++|+++|.+
T Consensus 360 ~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~---------~~~~------~~~~~~~~~~~~~v~~~vi~n~~ 423 (559)
T 2q9o_A 360 PVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGN---------TSYP------VSDNIVQVDAVDQWTYWLIENDP 423 (559)
T ss_dssp EEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC---------CCCC------GGGCEEEECCSSCEEEEEEEECT
T ss_pred EEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCC---------ccCC------CCceEEEcCCCCEEEEEEEeCCC
Confidence 444321 12345789999999974 4678664433211 0011 1345666654 678889999976
Q ss_pred ----CCCCceeccCCCeEEEeecc---------CCCCCC-CCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeee
Q 011178 382 ----DTLQSWHIDGHNFFAVGMDG---------GEWTPA-SRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRS 447 (491)
Q Consensus 382 ----~~~HP~HlHG~~F~Vl~~g~---------g~~~~~-~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HC 447 (491)
.+.||||||||+||||+++. |.|++. ....+++.+|.|||||.|++++|++|||+|||||.|||||
T Consensus 424 ~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HC 503 (559)
T 2q9o_A 424 EGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHC 503 (559)
T ss_dssp TSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEE
T ss_pred ccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEe
Confidence 68899999999999999987 666542 1245788999999999999999999999999999999999
Q ss_pred cchhhhhcceEEEEEEecCCccCccCCCC--CC-cchhccccc
Q 011178 448 ENWARQYLGQQFYLRVYSSANSWRDEYPI--PS-NALLCGRAV 487 (491)
Q Consensus 448 Hil~H~d~GMm~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~ 487 (491)
||++|++.|||+.|.|... ++ .+..++ |+ .+++|..+.
T Consensus 504 Hil~H~~~GM~~~~~v~~~-~~-~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 504 HIAWHVSGGLSVDFLERPA-DL-RQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp CCHHHHHTTCEEEEEECHH-HH-GGGCCHHHHHHHHHHHHHHH
T ss_pred cchhHhhcCCeEEEEECcc-hh-hhccccCCchhhhhhccccc
Confidence 9999999999999987543 32 233444 65 567998764
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-81 Score=652.08 Aligned_cols=372 Identities=19% Similarity=0.196 Sum_probs=295.2
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeC-CCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVK-DQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~-~~~Gt~wYH 79 (491)
|-.++..+||+||+ ||+|+|+|+|+|+++|+|||||+++++ ++||++ +.|+||++|+|+|+++ +++||||||
T Consensus 38 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---~~I~PG~~~~Y~f~~~~~~~GT~wYH 112 (439)
T 2xu9_A 38 LTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---LEIPPGESWTYEFTVPKELAGTFWYH 112 (439)
T ss_dssp EEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT---CCBCTTCEEEEEEECCSSCCEEEEEE
T ss_pred EEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc---ccCCCCCeEEEEEecCCCCCcceEec
Confidence 34567788999987 488999999999999999999999754 899986 4599999999999986 489999999
Q ss_pred CCcc----ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHH----HHHHHhcCCCCCCCceEEEcCcCC
Q 011178 80 PSLA----FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD----LKAILDSGSDLPFPDGLVINGRGS 151 (491)
Q Consensus 80 ~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~----~~~~~~~~~~~~~~~~~~vNG~~~ 151 (491)
||.+ .|+++||+|+|||+++++. .+...+++|++|+|+||+++.... ....+ ....++.++|||+.
T Consensus 113 ~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~~~~~~~~~~~----~g~~~~~~~iNG~~- 186 (439)
T 2xu9_A 113 PHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGRPAPHTPMDWM----NGKEGDLVLVNGAL- 186 (439)
T ss_dssp CCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTEECCCCHHHHH----HCCCCSEEEETTEE-
T ss_pred cCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCCcCCCCccccc----cCCCCCEEEECCcc-
Confidence 9974 7999999999999986532 111134789999999999885310 00111 12357899999999
Q ss_pred CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEE
Q 011178 152 NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIS 230 (491)
Q Consensus 152 ~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~ 230 (491)
.|.++|++| +|||||||+|+.+.+.|+|+||+|+|||+||.++ +|..++++.|+|||||||+|++++ +|+|+|++.
T Consensus 187 -~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~ 263 (439)
T 2xu9_A 187 -RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQAL 263 (439)
T ss_dssp -SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEE
T ss_pred -CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEec
Confidence 899999999 9999999999999999999999999999999997 899999999999999999999996 899999986
Q ss_pred eeccC------------------CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCC
Q 011178 231 TRFTS------------------QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSY 292 (491)
Q Consensus 231 ~~~~~------------------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 292 (491)
..... ......++++|.+... ..++|.. +.+....+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~p~~------------------l~~~~~l~~~---- 319 (439)
T 2xu9_A 264 PYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK--PLPLPKA------------------LSPFPTLPAP---- 319 (439)
T ss_dssp CCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC--CCCCCSC------------------CCCCCCCCCC----
T ss_pred ccccCCccccccccccccccCCCCCcceeEEEEecCCCc--cccCccc------------------CCCcccCCCC----
Confidence 43211 1124567888876531 1112210 0000000111
Q ss_pred CccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcE
Q 011178 293 HYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372 (491)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 372 (491)
..++++.+.... . ...|+|||++|..+..+ +.++.|++
T Consensus 320 -----~~~r~~~l~~~~---~-g~~~~iNg~~~~~~~~~---------------------------------~~~~~g~~ 357 (439)
T 2xu9_A 320 -----VVTRRLVLTEDM---M-AARFFINGQVFDHRRVD---------------------------------LKGQAQTV 357 (439)
T ss_dssp -----SEEEEEEEEEEG---G-GTEEEETTBCCCTTCCC---------------------------------EEECTTCE
T ss_pred -----CcceEEEEEeec---c-CceEeECCEECCCCCCc---------------------------------eecCCCCE
Confidence 123677666422 1 14799999998532211 45788999
Q ss_pred EEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhh
Q 011178 373 AEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR 452 (491)
Q Consensus 373 v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H 452 (491)
++|+|+|.+.+.||||||||+||||+++++. ..+|.|||||.|+|+++++|||++||||.|+|||||++|
T Consensus 358 ~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H 427 (439)
T 2xu9_A 358 EVWEVENQGDMDHPFHLHVHPFQVLSVGGRP----------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEH 427 (439)
T ss_dssp EEEEEEECSSSCEEEEESSCCBEEEEETTEE----------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHH
T ss_pred EEEEEEcCCCCCCCceeCCCcEEEEeeCCCC----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchh
Confidence 9999999998999999999999999997653 236899999999999999999999999999999999999
Q ss_pred hhcceEEEEEEe
Q 011178 453 QYLGQQFYLRVY 464 (491)
Q Consensus 453 ~d~GMm~~~~V~ 464 (491)
+|.|||+.|+|+
T Consensus 428 ~~~GMm~~~~Vg 439 (439)
T 2xu9_A 428 EDRGMMGVLEVG 439 (439)
T ss_dssp HHTTCEEEEEEC
T ss_pred hhcCCcEEEEeC
Confidence 999999999984
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-81 Score=650.58 Aligned_cols=378 Identities=17% Similarity=0.151 Sum_probs=296.5
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.++..+||+||+ ||+|+|+|+|+|+++|||||||++++++ +||++ ||+|+||++|+|+|++.+++|||||||
T Consensus 41 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~wYH~ 116 (451)
T 2uxt_A 41 WGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARMMSPNADWAPVLPIRQNAATLWYHA 116 (451)
T ss_dssp EEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGCBCTTCEECCEEECCSCSEEEEEEE
T ss_pred EEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCcCCCCCeEEEEEEcCCCCcceEEec
Confidence 44567889999987 4899999999999999999999998765 99998 899999999999999975699999999
Q ss_pred Cc----cccccCCceeEEEEecCCCCCCCCCC--CCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCCcc
Q 011178 81 SL----AFHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN 154 (491)
Q Consensus 81 H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~~~ 154 (491)
|. ..|+++||+|+|||+++++...+++. .++|++|+|+||+++.+.++. +...+.....+++++|||+. .|
T Consensus 117 H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~-~~~~~~~~~~~d~~liNG~~--~p 193 (451)
T 2uxt_A 117 NTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE-YNEPGSGGFVGDTLLVNGVQ--SP 193 (451)
T ss_dssp CCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE-CCCCSSSCCCCSEEEETTEE--SC
T ss_pred CCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee-cccccCCCCcCCEEEECCcc--cc
Confidence 98 58999999999999997543232322 488999999999998654431 11122345678999999999 89
Q ss_pred eEEEeCCCEEEEEEEEcCCCCeEeEEE-eCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 155 TFTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 155 ~~~v~~g~~~rlR~iN~~~~~~~~~~i-~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
.++|++| +|||||||+|..+.+.|+| +||+|+|||+||.++ +|..++++.|+|||||||+|++++ +++|+|++...
T Consensus 194 ~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~ 271 (451)
T 2uxt_A 194 YVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITCGEA 271 (451)
T ss_dssp EEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEEC---
T ss_pred eEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEEecCc
Confidence 9999999 9999999999999999999 899999999999987 899999999999999999999995 68899987653
Q ss_pred cc-----------CCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccce
Q 011178 233 FT-----------SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTH 301 (491)
Q Consensus 233 ~~-----------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~ 301 (491)
.. .......++++|........ .....| ..|.+....+. ....++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p---------------~~L~~~~~~~~--------~~~~~~ 327 (451)
T 2uxt_A 272 ASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLP---------------MRLLPTEIMAG--------SPIRSR 327 (451)
T ss_dssp -------------CCCCSCCEEEEEEECSCCC-----CCC---------------SCSSSSCCCCC--------CCSEEE
T ss_pred cccccccccccccCCCCCCcceEEEEecCCCcC-ccccCc---------------cccCCCCCCCC--------CCcceE
Confidence 21 01123357888875431110 000111 01211111110 113456
Q ss_pred EEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC
Q 011178 302 TIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE 381 (491)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~ 381 (491)
++.+. + .|+|||++|..+.. .+.++.|++|+|+|+|.
T Consensus 328 ~~~l~-------~--~~~iNg~~f~~~~~---------------------------------~~~~~~G~~~~~~l~N~- 364 (451)
T 2uxt_A 328 DISLG-------D--DPGINGQLWDVNRI---------------------------------DVTAQQGTWERWTVRAD- 364 (451)
T ss_dssp EEEEC-------S--SSSBTTBCCCTTCC---------------------------------CEEEETTCEEEEEEEEE-
T ss_pred EEEEe-------e--EEEECCEeCCCCCC---------------------------------cEEcCCCCEEEEEEECC-
Confidence 66554 1 69999999853211 14678899999999997
Q ss_pred CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce----eeeeecchhhhhcce
Q 011178 382 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM----WNIRSENWARQYLGQ 457 (491)
Q Consensus 382 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~----w~~HCHil~H~d~GM 457 (491)
+.||||||||+||||++++.. ++..+|.|||||.| +++++|+|+|||||. |||||||++|||.||
T Consensus 365 -~~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GM 433 (451)
T 2uxt_A 365 -EPQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGS 433 (451)
T ss_dssp -EEEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTC
T ss_pred -CCcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCC
Confidence 689999999999999996321 45678999999999 899999999999988 999999999999999
Q ss_pred EEEEEEecCC
Q 011178 458 QFYLRVYSSA 467 (491)
Q Consensus 458 m~~~~V~~~~ 467 (491)
|+.|+|.+.+
T Consensus 434 m~~~~v~~~~ 443 (451)
T 2uxt_A 434 IGQLLVNPVP 443 (451)
T ss_dssp EEEEEEECSC
T ss_pred cEEEEEccCc
Confidence 9999997653
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-80 Score=652.06 Aligned_cols=392 Identities=14% Similarity=0.111 Sum_probs=302.8
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.++..+||+||+. |+|+|+|+|+|+++|||||||+++++ ++||++ ||+|+||++|+|+|++.+++|||||||
T Consensus 60 ~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~WYH~ 135 (534)
T 3abg_A 60 VGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--EDITEPGSFKDYYYPNRQSARTLWYHD 135 (534)
T ss_dssp BEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SSCBSSCSCCCEEECCCSSSCEEEEEE
T ss_pred EEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CCCCCCCCeEEEEEecCCcceeEEEec
Confidence 445778899999984 89999999999999999999999865 599985 799999999999999976689999999
Q ss_pred Ccc----ccccCCceeEEEEecCCCCCCCCCC--CCCcceEEeeecccCCHHHHHHHHhcC-CCCCCCceEEEcCcCCCc
Q 011178 81 SLA----FHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKAILDSG-SDLPFPDGLVINGRGSNA 153 (491)
Q Consensus 81 H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~-~~~~~~~~~~vNG~~~~~ 153 (491)
|.+ .|+++||+|+|||+++++...+++. +++|++|+|+||+++.++++.. ..+ .....+|.++|||+. .
T Consensus 136 H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~--~~~~~~~~~gd~~lvNG~~--~ 211 (534)
T 3abg_A 136 HAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT--TNGELNSFWGDVIHVNGQP--W 211 (534)
T ss_dssp CCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC--CTTCSSCCCCSEEEETTEE--S
T ss_pred CccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec--cCCCCccccCceeccCCcc--C
Confidence 986 5889999999999998765444433 3678999999999886544311 111 134468999999999 8
Q ss_pred ceEEEeCCCEEEEEEEEcCCCCeEeEEEeC-------ceeEEEEecCcc-CCCCccCeEEEcCCceEEEEEEeCCCCc-c
Q 011178 154 NTFTVDQGKTYRFRISNVGISTSINFRIQG-------HKMLLVEVEGTH-TLQNTYDSLDIHLGQSYSVLVRADQPPQ-G 224 (491)
Q Consensus 154 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~-------~~~~via~DG~~-~~p~~~~~l~l~pGeR~dv~v~~~~~~g-~ 224 (491)
+.++|++ ++|||||||+|..+.+.|+|++ |+|+|||+||++ .+|..+++|.|+|||||||+|++++.+| +
T Consensus 212 p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~ 290 (534)
T 3abg_A 212 PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKT 290 (534)
T ss_dssp CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSE
T ss_pred ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCce
Confidence 9999998 5999999999999999999987 999999999985 5899999999999999999999997667 5
Q ss_pred eEEEEEeec--c----CCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 225 YYIVISTRF--T----SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 225 ~~i~~~~~~--~----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
|+|++.... + .......++++|.....+........| ..|.+.. .+.+. ..
T Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P---------------~~L~~~~-~p~~~-------~~ 347 (534)
T 3abg_A 291 IELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP---------------ANLRDVP-FPSPT-------TN 347 (534)
T ss_dssp EEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC---------------CCCCCCS-CCCCC-------CC
T ss_pred EEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc---------------cccccCC-CCCCc-------cc
Confidence 999874311 0 111234588998755421000000011 0111111 01111 13
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
.++++.+... ...|+|||++|.++..|.+ +.++.|++++|+|+
T Consensus 348 ~~~~~~~~~~------~~~w~iNG~~f~~~~~p~l-------------------------------~~v~~G~~~~w~i~ 390 (534)
T 3abg_A 348 TPRQFRFGRT------GPTWTINGVAFADVQNRLL-------------------------------ANVPVGTVERWELI 390 (534)
T ss_dssp CCEEEECSCC------CSTTCCCCBTTBCTTSCCC-------------------------------CEECTTCEEEEEEE
T ss_pred cceEEEEecc------CceeEECCcccCCCCCcce-------------------------------eeccCCCEEEEEEE
Confidence 4567766531 2369999999975444432 34678999999999
Q ss_pred cCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEE-ccCcceeeeeecchhhhhcc
Q 011178 379 NPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVP-LDNVGMWNIRSENWARQYLG 456 (491)
Q Consensus 379 N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~-adnpG~w~~HCHil~H~d~G 456 (491)
|.+. +.||||||||+||||+++.|.+.. ...++.+ .|||||.|+|+++++|||+ +||||.|||||||++|+|.|
T Consensus 391 N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~G 466 (534)
T 3abg_A 391 NAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHD 466 (534)
T ss_dssp ECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTT
T ss_pred cCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcC
Confidence 9874 589999999999999996554321 1234555 8999999999999999998 89999999999999999999
Q ss_pred eEEEEEEecCC
Q 011178 457 QQFYLRVYSSA 467 (491)
Q Consensus 457 Mm~~~~V~~~~ 467 (491)
||+.|+|...+
T Consensus 467 Mm~~~~V~~~~ 477 (534)
T 3abg_A 467 MMAAFNATVLP 477 (534)
T ss_dssp CEEEEEECSSC
T ss_pred CceEEEEEecc
Confidence 99999998655
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-80 Score=638.81 Aligned_cols=379 Identities=15% Similarity=0.174 Sum_probs=294.1
Q ss_pred CCCccc-CCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFS-SLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~-~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++. .+||+||+. |+|+|+|+|+|+++|||||||++++ +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 445667 889999874 8999999999999999999999974 56999997 9999999999999997689999999
Q ss_pred CC----ccccccCCceeEEEEecCCCCCCCCCCCC-CcceEEeeecccCCHHHHHHH--HhcCCCCCCCceEEEcCcCCC
Q 011178 80 PS----LAFHKAAGGYGGIKIASRPLIPVPFDPPA-GDFTILAGDWYKKNHTDLKAI--LDSGSDLPFPDGLVINGRGSN 152 (491)
Q Consensus 80 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~~vNG~~~~ 152 (491)
|| +..|+++||+|+|||+++++. .+++ ++ +|++|+|+||+++. +++... .........+++++|||+.
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~-- 178 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVK-- 178 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEE--
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCcc--
Confidence 99 569999999999999997653 2222 35 89999999999986 432110 0001123568999999999
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEE--eC---ceeEEEEecCccCC-CCccCeEEEcCCceEEEEEEeCCCCcceE
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRI--QG---HKMLLVEVEGTHTL-QNTYDSLDIHLGQSYSVLVRADQPPQGYY 226 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i--~~---~~~~via~DG~~~~-p~~~~~l~l~pGeR~dv~v~~~~~~g~~~ 226 (491)
.+.++|++| +|||||||+|+.+.+.|+| ++ |+|+|||+||.+++ |..++++.|+|||||||+|+++ .+.|+
T Consensus 179 ~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~ 255 (448)
T 3aw5_A 179 DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYL 255 (448)
T ss_dssp TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEE
T ss_pred cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceE
Confidence 899999999 9999999999999999999 99 99999999999997 9999999999999999999998 36899
Q ss_pred EEEEeecc--------------CCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCC
Q 011178 227 IVISTRFT--------------SQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSY 292 (491)
Q Consensus 227 i~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 292 (491)
|++..... .......++++|.+...... |. . |....+.+.
T Consensus 256 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~-~--------------L~~lp~~~~----- 309 (448)
T 3aw5_A 256 LKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE-A--------------LSDPPPEPP----- 309 (448)
T ss_dssp EEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC-C--------------CSCCCCCCC-----
T ss_pred EEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc-c--------------cCCCCCCCC-----
Confidence 99875421 01124566778865432110 11 0 111000010
Q ss_pred CccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEe-ecCCc
Q 011178 293 HYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMA-ADFRG 371 (491)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~g~ 371 (491)
....++++.+... ...|+|||++|... .|. +. ++.|+
T Consensus 310 ---~~~~~~~~~l~~~------~~~~~iNg~~~~~~-~p~--------------------------------~~~~~~g~ 347 (448)
T 3aw5_A 310 ---KPTRTRRFALSLS------GMQWTINGMFWNAS-NPL--------------------------------FEHVSVEG 347 (448)
T ss_dssp ---CCSEEEEEEEEEE------TTEEEETTBCCCTT-CTT--------------------------------CCCEEECE
T ss_pred ---CCCceEEEEEeCC------CceeeECCCcCCCC-CCc--------------------------------eeccCCCC
Confidence 1234677777641 13599999999532 121 23 57899
Q ss_pred EEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCC-CCCCCc----ccCCCCceeeEEeCCCCEEEEE--EE---ccCc
Q 011178 372 FAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTP-ASRLTY----NLRDTISRCTVQVYPKSWTAVY--VP---LDNV 440 (491)
Q Consensus 372 ~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~-~~~~~~----~~~~p~~rDTv~v~p~~~~~ir--f~---adnp 440 (491)
+|+|+|+|.+ .+.||||||||+||||+++ |.+.. .+...+ +..++.|||||.|+|+++++|+ |+ +|||
T Consensus 348 ~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp 426 (448)
T 3aw5_A 348 VELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL 426 (448)
T ss_dssp EEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE
T ss_pred eEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc
Confidence 9999999998 7899999999999999995 44421 111112 3345679999999999999665 99 9999
Q ss_pred ceeeeeecchhhhhcceEEEEEEe
Q 011178 441 GMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 441 G~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|||||||++|+|.|||+.|+|.
T Consensus 427 --w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 427 --FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp --EEEEESSHHHHHTTCEEEEEEC
T ss_pred --EEEEcCChHHHhCCCceEEEeC
Confidence 9999999999999999999883
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-78 Score=641.51 Aligned_cols=403 Identities=12% Similarity=0.105 Sum_probs=298.8
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCC----------------------CCeeeecccCCCCCCCCCCCCC---CCC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYM----------------------APLITLNGVQQRRNSWQDGVYG---TNC 55 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~----------------------~~siH~HG~~~~~~~~~DG~~~---~q~ 55 (491)
|-.++..+|||||+. |+|+|+|+|+|++ +|+|||||++++ +++||+++ +||
T Consensus 49 ~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~DG~p~~~i~~g 126 (513)
T 2wsd_A 49 WGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYPEAWFSKD 126 (513)
T ss_dssp EEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGSCCTTSCBCGG
T ss_pred EEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccCCCCcccccCC
Confidence 345678899999984 8999999999986 899999999975 56999984 789
Q ss_pred CCCCCCeE---EEEEEeCCCccceeEeCCcc----ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHH
Q 011178 56 PIPPGKNF---TYVLQVKDQIGSYFYFPSLA----FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDL 128 (491)
Q Consensus 56 ~i~PG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~ 128 (491)
+|+||++| +|+|++.+++||||||||.+ .|+++||+|+|||+++++.+.+++.+++|++|+|+||+++.++++
T Consensus 127 ~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~d~~l~l~D~~~~~~~~~ 206 (513)
T 2wsd_A 127 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSL 206 (513)
T ss_dssp GSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGGEEEEEEEEEEECTTSCE
T ss_pred cccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCCcEEEEEEeeecCCCCce
Confidence 99999555 99999866899999999986 489999999999999765444455668999999999998865433
Q ss_pred HHHHh-----------cCCCCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCc-eeEEEEecCccC
Q 011178 129 KAILD-----------SGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGH-KMLLVEVEGTHT 196 (491)
Q Consensus 129 ~~~~~-----------~~~~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~-~~~via~DG~~~ 196 (491)
..... .......+++++|||+. .+.++|+++ +|||||||+|..+.+.|+|++| +|+|||+||.++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~ 283 (513)
T 2wsd_A 207 FYPSAPENPSPSLPNPSIVPAFCGETILVNGKV--WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLL 283 (513)
T ss_dssp ECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEE--SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEE
T ss_pred ecccccccccccccccccccccccceEEECCcc--cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcc
Confidence 11000 01123568999999999 899999985 8999999999999999999999 999999999998
Q ss_pred -CCCccCeEEEcCCceEEEEEEeCCCCcceE-EEEEeec-cC-CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhh
Q 011178 197 -LQNTYDSLDIHLGQSYSVLVRADQPPQGYY-IVISTRF-TS-QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQA 272 (491)
Q Consensus 197 -~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~-i~~~~~~-~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 272 (491)
+|..+++|.|+|||||||+|++++.+|++. +...... .. ......++|+|..+...........|. .
T Consensus 284 ~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~-~-------- 354 (513)
T 2wsd_A 284 PRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPK-Y-------- 354 (513)
T ss_dssp EEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCS-B--------
T ss_pred cCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCc-c--------
Confidence 899999999999999999999997667633 3322110 01 112345788887653111100001111 0
Q ss_pred hhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCC
Q 011178 273 RSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDN 352 (491)
Q Consensus 273 ~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~ 352 (491)
|......+. .....++++.+..... ..+...|.|||++|..+ .
T Consensus 355 ------l~~~~~~~~-------~~~~~~~~~~l~~~~~-~~g~~~~~iNg~~~~~~---~-------------------- 397 (513)
T 2wsd_A 355 ------LASYPSVQH-------ERIQNIRTLKLAGTQD-EYGRPVLLLNNKRWHDP---V-------------------- 397 (513)
T ss_dssp ------CSCCGGGCC-------CCEEEEEEEEEEEEEC-TTSCEEEEETTBCTTSC---C--------------------
T ss_pred ------ccCCCCccc-------CCCcceEEEEEEeecC-CCCCceEeECCccCCCc---c--------------------
Confidence 100000000 0113456666654221 23456799999998532 1
Q ss_pred CCCCCcceeeeEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccC---CCCCCCC-------CCcccCCCCceee
Q 011178 353 PTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGG---EWTPASR-------LTYNLRDTISRCT 422 (491)
Q Consensus 353 p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~~-------~~~~~~~p~~rDT 422 (491)
.+.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++... ......++.||||
T Consensus 398 -----------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDT 466 (513)
T 2wsd_A 398 -----------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDT 466 (513)
T ss_dssp -----------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSE
T ss_pred -----------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccE
Confidence 024578999999999998889999999999999999752 1211100 0112234569999
Q ss_pred EEeCCCCEEEEEEEc-cCcceeeeeecchhhhhcceEEEEEEecCC
Q 011178 423 VQVYPKSWTAVYVPL-DNVGMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 423 v~v~p~~~~~irf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
|.|+|+++++|+|++ ||||.|||||||++|+|.|||+.|+|.+++
T Consensus 467 v~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~~ 512 (513)
T 2wsd_A 467 IQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDPH 512 (513)
T ss_dssp EEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC-
T ss_pred EEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCCC
Confidence 999999999999999 899999999999999999999999997653
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-78 Score=625.27 Aligned_cols=379 Identities=17% Similarity=0.171 Sum_probs=288.5
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCC-ccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQ-IGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~-~Gt~wYH 79 (491)
|-.++..+||+||+. |+|+|+|+|+|+++|||||||+++ ++++||++ ||+|+||++|+|+|+++++ +||||||
T Consensus 73 ~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p--q~~I~PG~s~~Y~f~~~~~~~GT~WYH 148 (481)
T 3zx1_A 73 YTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP--HDPILAGEERIYRFEIPQDSAGTYWYH 148 (481)
T ss_dssp EEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT--TSCBCTTCEEEEEEECCTTCCEEEEEE
T ss_pred EEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc--cCcCCCCCeEEEEEeCCCCCCceEEEe
Confidence 345678899999885 899999999999999999999997 46799996 8999999999999999743 8999999
Q ss_pred CCc----cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHH-HHhcCCCCCCCceEEEcCcCCCcc
Q 011178 80 PSL----AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKA-ILDSGSDLPFPDGLVINGRGSNAN 154 (491)
Q Consensus 80 ~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~vNG~~~~~~ 154 (491)
||. +.|+++||+|+|||+++++....+ ++++ |+|+||+++.++++.. ..........++.++|||+. .|
T Consensus 149 ~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~--~p 222 (481)
T 3zx1_A 149 PHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF--KP 222 (481)
T ss_dssp CCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE--SC
T ss_pred ecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc--Cc
Confidence 997 489999999999999976543333 4455 9999999986543310 00000013467899999999 89
Q ss_pred eEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeec
Q 011178 155 TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRF 233 (491)
Q Consensus 155 ~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~ 233 (491)
+++|++|+ ||||||+|+.+.+.|+|+||+|+|||+||.++ +|..+++|.|+|||||||+|++++ ++.|.|.+....
T Consensus 223 ~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~ 299 (481)
T 3zx1_A 223 KIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYD 299 (481)
T ss_dssp EEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCC
T ss_pred eEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEeccc
Confidence 99999998 99999999999999999999999999998765 899999999999999999999984 678998875432
Q ss_pred cC-----CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEecc
Q 011178 234 TS-----QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNT 308 (491)
Q Consensus 234 ~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~ 308 (491)
.. .......++++.... ....+|. .|.+..+.+. ...++++.+...
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~--~~~~lP~------------------~l~~~~~~~~---------~~~~r~~~l~~~ 350 (481)
T 3zx1_A 300 RDKMMVKEEPNTLFLANINLKK--ENVELPK------------------NLKIFKPSEE---------PKEFKEIIMSED 350 (481)
T ss_dssp CCCSSCCCCCCCEEEEEEEEEC--CCCCCCS------------------CSCCCCCCCC---------CCEEEEEEEEEC
T ss_pred ccCccccCCCCceeEEEEecCC--CCccCCc------------------cccCCCCCCC---------CCcEEEEEEecc
Confidence 10 112233444443222 1111221 0111111111 124566666542
Q ss_pred ccCcC-----Ce--------EeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 309 APTIN-----GK--------QRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 309 ~~~~~-----~~--------~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
..... +. ..|+|||+.|.. +.| .+.++.|++|+|
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-~~~--------------------------------~~~~~~G~~v~w 397 (481)
T 3zx1_A 351 HMQMHGMMGKSEGELKIALASMFLINRKSYDL-KRI--------------------------------DLSSKLGVVEDW 397 (481)
T ss_dssp CSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-TCC--------------------------------CEEEETTCCEEE
T ss_pred chhcccccccccccccccccceeEECCEeCCC-CCc--------------------------------eEEeCCCCEEEE
Confidence 11000 01 249999998852 111 146789999999
Q ss_pred EEEcCCCCCCceeccCCCeEEEee--ccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh
Q 011178 376 VFENPEDTLQSWHIDGHNFFAVGM--DGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ 453 (491)
Q Consensus 376 ~i~N~~~~~HP~HlHG~~F~Vl~~--g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~ 453 (491)
+|.|.+.+.|||||||++|||+++ ++... ...++.|||||.|+|+++++|+|+|||||.|||||||++|+
T Consensus 398 ~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~--------~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~ 469 (481)
T 3zx1_A 398 IVINKSHMDHPFHIHGTQFELISSKLNGKVQ--------KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHE 469 (481)
T ss_dssp EEEECSSSCEEEEETTCCEEEEEEEETTEEE--------ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHH
T ss_pred EEEcCCCCceeEEEeccEEEEEEecccCCCC--------CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHH
Confidence 999999899999999999999998 33211 22357899999999999999999999999999999999999
Q ss_pred hcceEEEEEEe
Q 011178 454 YLGQQFYLRVY 464 (491)
Q Consensus 454 d~GMm~~~~V~ 464 (491)
|.|||..|+|.
T Consensus 470 d~GMm~~~~V~ 480 (481)
T 3zx1_A 470 DLGMMGNLEVK 480 (481)
T ss_dssp HTTCEEEEEEE
T ss_pred hcCCceEEEEe
Confidence 99999999996
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-77 Score=645.22 Aligned_cols=427 Identities=14% Similarity=0.084 Sum_probs=286.1
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCC-----------------------------------------Ceeeeccc
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMA-----------------------------------------PLITLNGV 39 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~-----------------------------------------~siH~HG~ 39 (491)
|-.++..+||||++. |+|+|+|+|+|+++ |+|||||+
T Consensus 56 ~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl 135 (612)
T 3gyr_A 56 WGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGA 135 (612)
T ss_dssp EEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETC
T ss_pred EEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCCCCceEEcCCC
Confidence 456788999999984 89999999999765 67899999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCc----cccccCCceeEEEEecCCCCCCCCCCCCCcceE
Q 011178 40 QQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL----AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTI 115 (491)
Q Consensus 40 ~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l 115 (491)
+++ +++||++ ||+|+||++|+|+|++.+++||||||||. +.|+++||+|+|||+++++...+++.+++|++|
T Consensus 136 ~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~~~p~~d~e~~l 211 (612)
T 3gyr_A 136 QTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPL 211 (612)
T ss_dssp CCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEE
T ss_pred ccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccccCCCCCCccEEE
Confidence 874 5699986 89999999999999997678999999997 479999999999999977655556677999999
Q ss_pred EeeecccCCHHHHHHH--H-------h--------cCCCCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEe
Q 011178 116 LAGDWYKKNHTDLKAI--L-------D--------SGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSIN 178 (491)
Q Consensus 116 ~l~d~~~~~~~~~~~~--~-------~--------~~~~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~ 178 (491)
+|+||+++.+.+.... + . .......++.++|||+. .+.+.+++ ++|||||||+|+.+.+.
T Consensus 212 vl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~--~p~~~v~~-~~yRlRliNas~~~~~~ 288 (612)
T 3gyr_A 212 LIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI--WPYADVDD-GWYRLRLVNASNARIYN 288 (612)
T ss_dssp EEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE--SCEEEEES-SEEEEEEEECCSSCCEE
T ss_pred EEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc--cceEeccC-cEEEEEEEeccCCccee
Confidence 9999998754332100 0 0 00123457899999999 89999976 58999999999999999
Q ss_pred EEEeCc-------eeEEEEecCccC-C------CCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccC--------C
Q 011178 179 FRIQGH-------KMLLVEVEGTHT-L------QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTS--------Q 236 (491)
Q Consensus 179 ~~i~~~-------~~~via~DG~~~-~------p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~--------~ 236 (491)
|+|++| +|+|||+||.++ + |..++.|.|+|||||||+|++++.+|.++......... .
T Consensus 289 l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (612)
T 3gyr_A 289 LVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLG 368 (612)
T ss_dssp EEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGG
T ss_pred EEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccc
Confidence 999998 499999999887 3 34557899999999999999998766655443322111 0
Q ss_pred CcceEEEEEecCCCCCC--CCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEecccc--Cc
Q 011178 237 VLSATSVLHYSNSAGSV--SGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAP--TI 312 (491)
Q Consensus 237 ~~~~~ail~y~~~~~~~--~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~--~~ 312 (491)
......+++|....... ...+|........ .+ ....+ ...+...+..... ..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-----------~~----~~~~~---------~~~~~~~~~~~~~~~~~ 424 (612)
T 3gyr_A 369 GVRYPEVMEFRVRETCEEDSFALPEVLSGSFR-----------RM----SHDIP---------HGHRLIVLTPPGTKGSG 424 (612)
T ss_dssp TBSCCEEEEEEEECCSCCCCCCCCSSCCSSCC-----------CC----CTTSC---------CEEEEEEEECTTCTTTT
T ss_pred cccccceeeecccCCCCCCccccccccccccc-----------cc----ccccc---------ccccccccccccccccc
Confidence 12234566665432211 1111110000000 00 00000 0000111100000 00
Q ss_pred CCeEeEEEcCeeee-CCCCcc---ccccccCC-CCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCCCce
Q 011178 313 NGKQRYAVNSVSFI-PADTPL---KLADYFKI-PGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSW 387 (491)
Q Consensus 313 ~~~~~~~iNg~~f~-~~~~p~---~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~ 387 (491)
.....|.++..... ....+. +....... ...+.. ++....+...+.++.|++|+|+|+|.+.+.|||
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~ 496 (612)
T 3gyr_A 425 GHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRR--------TARTFNDGLGFTIGEGTHEQWTFLNLSPILHPM 496 (612)
T ss_dssp TCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEE--------EECSTTSCCCEEEETTCEEEEEEEECSSSCEEE
T ss_pred ccccccccccccccccccccccceeeeccCCCccccccc--------cCccCCCCcceEeCCCCEEEEEEEcCCCCCcCE
Confidence 00111111110000 000000 00000000 000000 001111223467899999999999999999999
Q ss_pred eccCCCeEEEeeccCCCCCCC----------------CCCcccCCCCceeeEEeCCCCEEEEEEE-ccCcceeeeeecch
Q 011178 388 HIDGHNFFAVGMDGGEWTPAS----------------RLTYNLRDTISRCTVQVYPKSWTAVYVP-LDNVGMWNIRSENW 450 (491)
Q Consensus 388 HlHG~~F~Vl~~g~g~~~~~~----------------~~~~~~~~p~~rDTv~v~p~~~~~irf~-adnpG~w~~HCHil 450 (491)
|||||+||||+++.+.+.... ....+..++.|||||.|+++++++|||+ +||||.||||||||
T Consensus 497 HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 497 HIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred eECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 999999999998654332110 1234567789999999999999999998 69999999999999
Q ss_pred hhhhcceEEEEEEecCCc
Q 011178 451 ARQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 451 ~H~d~GMm~~~~V~~~~~ 468 (491)
+|||.|||+.|+|++|+.
T Consensus 577 ~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 577 EHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp HHHHTTCEEEEEEECHHH
T ss_pred HHHhCcCCcceEEeCCcc
Confidence 999999999999998875
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-76 Score=611.13 Aligned_cols=385 Identities=18% Similarity=0.208 Sum_probs=283.9
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.++..+||+|++. |+|+|+|+|+|+++|+|||||+++++ ++||++ ||+|+||++|+|+|++.+++|||||||
T Consensus 39 ~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p--~~~i~PG~~~~Y~f~~~~~aGT~wYH~ 114 (488)
T 3od3_A 39 WGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP--QGIIPPGGKRSVTLNVDQPAATCWFHP 114 (488)
T ss_dssp EEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT--TCCBCTTCEEEEEEECCSCSEEEEEEC
T ss_pred EEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC--cCcCcCCCeEEEEEecCCCceeEEEEe
Confidence 445778899999985 89999999999999999999999854 699997 899999999999999975689999999
Q ss_pred Cc----cccccCCceeEEEEecCCCCCCCCCC--CCCcceEEeeecccCCHHHHHH---HHhcCCCCCCCceEEEcCcCC
Q 011178 81 SL----AFHKAAGGYGGIKIASRPLIPVPFDP--PAGDFTILAGDWYKKNHTDLKA---ILDSGSDLPFPDGLVINGRGS 151 (491)
Q Consensus 81 H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~---~~~~~~~~~~~~~~~vNG~~~ 151 (491)
|. +.|+++||+|+|||+++++...+++. .++|++|+|+||+++.++++.. ... ......+|.++|||+.
T Consensus 115 H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~-~~~g~~gd~~lvNG~~- 192 (488)
T 3od3_A 115 HQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMT-AAVGWFGDTLLTNGAI- 192 (488)
T ss_dssp CCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHH-HHHCCCCSEEEETTBS-
T ss_pred cCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceeccccccc-cccCCCCCEEEEcCCc-
Confidence 97 47999999999999997643333332 3569999999999976543210 000 0123467999999999
Q ss_pred CcceEEEeCCCEEEEEEEEcCCCCeEeEEE-eCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEE
Q 011178 152 NANTFTVDQGKTYRFRISNVGISTSINFRI-QGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVI 229 (491)
Q Consensus 152 ~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i-~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~ 229 (491)
.|.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||.++ +|..+++|.|+|||||||+|++++ .+.|.|++
T Consensus 193 -~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~ 269 (488)
T 3od3_A 193 -YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVT 269 (488)
T ss_dssp -SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEE
T ss_pred -CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEE
Confidence 788877 5689999999999999999999 699999999999986 899999999999999999999994 67899987
Q ss_pred EeeccCC-----CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEE
Q 011178 230 STRFTSQ-----VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIR 304 (491)
Q Consensus 230 ~~~~~~~-----~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 304 (491)
....... ......+++......+....+|. .|....+. |. .....+|++.
T Consensus 270 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~------------------~L~~~~~~--~~-----~~~~~~r~~~ 324 (488)
T 3od3_A 270 LPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD------------------TLSSLPAL--PS-----LEGLTVRKLQ 324 (488)
T ss_dssp CCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS------------------CCCCCCCC--CC-----CTTCCEEEEE
T ss_pred eccCCCCcccccccCccceeEecccccCCCCCCCc------------------ccccCCCC--cc-----cccccceEEE
Confidence 5432110 01122233332211001111111 01110000 00 0012345555
Q ss_pred Eeccc-------------------cCc----------CCe-------------EeEEEcCeeeeCCCCccccccccCCCC
Q 011178 305 LQNTA-------------------PTI----------NGK-------------QRYAVNSVSFIPADTPLKLADYFKIPG 342 (491)
Q Consensus 305 l~~~~-------------------~~~----------~~~-------------~~~~iNg~~f~~~~~p~~~~~~~~~~~ 342 (491)
+.... ... .+. ..|+|||++|.. +.|
T Consensus 325 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~-~~~----------- 392 (488)
T 3od3_A 325 LSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM-NKP----------- 392 (488)
T ss_dssp EEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT-TCC-----------
T ss_pred EEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCC-CCC-----------
Confidence 53200 000 110 138999999852 112
Q ss_pred ccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCcee
Q 011178 343 VFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRC 421 (491)
Q Consensus 343 ~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rD 421 (491)
.+.++.|++|+|+|.|.+ .+.|||||||++|+|+++++... ...++.|||
T Consensus 393 ---------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~--------~~~~~~~kD 443 (488)
T 3od3_A 393 ---------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP--------AAHRAGWKD 443 (488)
T ss_dssp ---------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCC--------CGGGSSSBS
T ss_pred ---------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCcc--------ccccCCcee
Confidence 146788999999999988 57899999999999999964322 123457999
Q ss_pred eEEeCCCCEEEEEEEcc----CcceeeeeecchhhhhcceEEEEEE
Q 011178 422 TVQVYPKSWTAVYVPLD----NVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 422 Tv~v~p~~~~~irf~ad----npG~w~~HCHil~H~d~GMm~~~~V 463 (491)
||.|+ +++++|+|+++ +||.||||||||+|||.|||..|+|
T Consensus 444 TV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 444 TVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred EEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 99999 99999999974 5789999999999999999999986
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-53 Score=466.55 Aligned_cols=217 Identities=16% Similarity=0.188 Sum_probs=166.5
Q ss_pred ccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCC----CCCCCCCCC---CCCCCCCCCCeEEEEEEeCC------
Q 011178 7 FSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQR----RNSWQDGVY---GTNCPIPPGKNFTYVLQVKD------ 71 (491)
Q Consensus 7 ~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~----~~~~~DG~~---~~q~~i~PG~~~~Y~f~~~~------ 71 (491)
...+||+||+ ||+|+|+|+|+|++++||||||++++ +.+++||++ .+||+|+||++|+|+|++++
T Consensus 70 ~~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY~f~v~~~~gP~~ 149 (742)
T 2r7e_A 70 MGLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPMA 149 (742)
T ss_dssp TTTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSSCCTTCEECCEEEECGGGSCCS
T ss_pred cCCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCcccccccCcCCCCCeEEEEEEeccccCCCc
Confidence 3678999987 58999999999999999999999975 455666665 38999999999999999853
Q ss_pred ---CccceeEeCCccc--cccCCceeEEEEecCCCCCCCCCCCCCcceEEeee------cccCCHHHHHHHHhcCCCCCC
Q 011178 72 ---QIGSYFYFPSLAF--HKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGD------WYKKNHTDLKAILDSGSDLPF 140 (491)
Q Consensus 72 ---~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~~~~~ 140 (491)
++||||||||.+. |+++||+|+|||++++..........+|++|++++ |+++........+........
T Consensus 150 ~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~~~~~~ 229 (742)
T 2r7e_A 150 SDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAW 229 (742)
T ss_dssp SSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-------CCSCCCC
T ss_pred CCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCCCcccccc
Confidence 4699999999985 89999999999999764321111124888888864 444432111001111112223
Q ss_pred CceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCCC-eEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEe
Q 011178 141 PDGLVINGRGS-NANTFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRA 218 (491)
Q Consensus 141 ~~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~~-~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~ 218 (491)
++.++|||+.. ..+.+++++|++|||||+|++... .+.|+|+||.|+|++. ..|++.|.|||++++++++
T Consensus 230 ~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~ 301 (742)
T 2r7e_A 230 PKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--------RQASLEISPITFLTAQTLL 301 (742)
T ss_dssp CCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE--------ECCSCCCCTTCCCEEEECC
T ss_pred CceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE--------ecceEEeCCCcEEEEEEEe
Confidence 56789999974 347899999999999999999864 7999999999999743 3578889999999999999
Q ss_pred CCCCcceEEEEEee
Q 011178 219 DQPPQGYYIVISTR 232 (491)
Q Consensus 219 ~~~~g~~~i~~~~~ 232 (491)
+ .+|.|.+.++..
T Consensus 302 ~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 302 M-DLGQFLLFCHIS 314 (742)
T ss_dssp C-SCSEECCCCCSS
T ss_pred C-CCeeEEEEeCCh
Confidence 8 589988877653
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-51 Score=465.64 Aligned_cols=355 Identities=14% Similarity=0.161 Sum_probs=245.4
Q ss_pred cCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCC----CCCCCCCCCC---CCCCCCCCCeEEEEEEeCCC------
Q 011178 8 SSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQR----RNSWQDGVYG---TNCPIPPGKNFTYVLQVKDQ------ 72 (491)
Q Consensus 8 ~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~----~~~~~DG~~~---~q~~i~PG~~~~Y~f~~~~~------ 72 (491)
..|||+||+ ||+|+|+|+|+|++++||||||++++ +.+|+||+++ +||+|+||++|+|+|+++++
T Consensus 91 ~~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~ 170 (1065)
T 2j5w_A 91 GFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEG 170 (1065)
T ss_dssp TTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTT
T ss_pred CCcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccC
Confidence 478888887 48889999999999999999999987 5678888874 79999999999999999754
Q ss_pred ---ccceeEeCCcc--ccccCCceeEEEEecCCCCCCCCC-CCCCcceEEee------ecccCCHHHHHHHH-hcCCC--
Q 011178 73 ---IGSYFYFPSLA--FHKAAGGYGGIKIASRPLIPVPFD-PPAGDFTILAG------DWYKKNHTDLKAIL-DSGSD-- 137 (491)
Q Consensus 73 ---~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~------d~~~~~~~~~~~~~-~~~~~-- 137 (491)
+||||||||.+ .|+++||+|+|||++++....+.+ .+|+|++|+|+ ||++... +..+. +.+..
T Consensus 171 d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~ 248 (1065)
T 2j5w_A 171 DGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDK 248 (1065)
T ss_dssp SCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCT
T ss_pred CCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccc
Confidence 59999999998 467899999999999865333322 45889999999 4554422 11111 11100
Q ss_pred --C---CCCceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCc
Q 011178 138 --L---PFPDGLVINGRGS-NANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 210 (491)
Q Consensus 138 --~---~~~~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGe 210 (491)
. ..++.++|||+.. ..+.+++++|++|||||||+|.. ..+.|+|+||.|++ +|..++++.|+|||
T Consensus 249 ~~~~~~~~~~~~~iNG~~~~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pGe 320 (1065)
T 2j5w_A 249 DNEDFQQSNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPAT 320 (1065)
T ss_dssp TCHHHHHHTEEEEETTEETTCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBTC
T ss_pred ccccccccCcEEEECCccCCCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCCc
Confidence 0 0235799999974 24789999999999999999976 68999999999993 56788999999999
Q ss_pred eEEEEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCC------
Q 011178 211 SYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGP------ 284 (491)
Q Consensus 211 R~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~------ 284 (491)
||||+|++++ +|.|+|.++..... .....+.++|.+.....+.+.|..+. ...+ +..++.+.|++.+...
T Consensus 321 r~dVlv~~~~-pG~y~i~~h~~~h~-~~Gm~~~~~V~~~~~~~~~~~~~g~~-~~~~-~i~A~e~~wdy~~~~~~~~~~~ 396 (1065)
T 2j5w_A 321 LFDAYMVAQN-PGEWMLSCQNLNHL-KAGLQAFFQVQECNKSSSKDNIRGKH-VRHY-YIAAEEIIWNYAPSGIDIFTKE 396 (1065)
T ss_dssp EEEEEEECCS-CEEEEEEECSHHHH-HTTCEEEEEEECSCCCCCCCCCTTSE-EEEE-EEEEEEEEEESCTTSBCTTTCC
T ss_pred EEEEEEEeCC-CeeEEEEecCcchh-hCCCEEEEEEecCCCccccccccccc-eeEE-EEeceecccccCCCCccccccc
Confidence 9999999995 89999998865321 12467888887655433333332210 1111 3345667777765432
Q ss_pred CCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeE
Q 011178 285 RPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSV 364 (491)
Q Consensus 285 ~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 364 (491)
.+++++++ ...+ |.......+++++-.++ ++|.+ +.|+.+. ...|..........+
T Consensus 397 ~~~~~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d--------------~~f~~~~-~~~~~~~~~g~lgpv 452 (1065)
T 2j5w_A 397 NLTAPGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTD--------------ASFTNRK-ERGPEEEHLGILGPV 452 (1065)
T ss_dssp BTTCTTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESS--------------TTCCSBC-CCCGGGGGGTTSCCC
T ss_pred ccCCCccc-------chhh-hccCCcccCceEeeeee-ecccC--------------CceEEcC-cCCcccccccccCce
Confidence 22333321 1112 22222233445555555 45532 2222110 001110011112467
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeec
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMD 400 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g 400 (491)
+.++.|++++++|.|....+|+||+||+.|++++.|
T Consensus 453 i~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 453 IWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp EEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred EEEeCCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 899999999999999999999999999999977653
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=373.49 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=197.7
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++..+||+|++. |+|+|+|+|.++.+++|||||+++.+++++||+++ +||+|+||++|+|+|++ +++||||||
T Consensus 25 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~-~~~Gt~wYH 103 (318)
T 3g5w_A 25 FAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYH 103 (318)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEc-CCCEEEEEE
Confidence 345677899999874 89999999999999999999999988889999999 99999999999999999 589999999
Q ss_pred CCcccc--c-cCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC-cce
Q 011178 80 PSLAFH--K-AAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN-ANT 155 (491)
Q Consensus 80 ~H~~~q--~-~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~-~~~ 155 (491)
||.+.+ . .+||+|+|||++++..+.+. .+++|++|+|+||+++..... ...+.....++.++|||+.+. ...
T Consensus 104 ~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~~~~~~~~~~d~~~ING~~~~~~~~ 179 (318)
T 3g5w_A 104 CHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---GEGGIPGDVFDYYTINAKSFPETQP 179 (318)
T ss_dssp CCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---TCCCCTTCCCCEEEETTBCBTSSCC
T ss_pred ccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---ccCCCCCCcCcEEEEcCcCCCCCcc
Confidence 999744 3 58999999999875322111 458999999999987643211 111222345789999999831 234
Q ss_pred EEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeecc
Q 011178 156 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT 234 (491)
Q Consensus 156 ~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~ 234 (491)
+++++|++|||||+|++.. .+.|+|+||.|+||+.||.++ +|...+++.|+||||+||+++++ .+|.|.+.++....
T Consensus 180 l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~-~pG~w~~hCH~~~H 257 (318)
T 3g5w_A 180 IRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD-NPGLWMIHDHVDTH 257 (318)
T ss_dssp EEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEESSGGG
T ss_pred EEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECC-CCeeEEEEeccHHH
Confidence 9999999999999999975 799999999999999999987 78889999999999999999999 68999998886532
Q ss_pred CC-----CcceEEEEEecCCC
Q 011178 235 SQ-----VLSATSVLHYSNSA 250 (491)
Q Consensus 235 ~~-----~~~~~ail~y~~~~ 250 (491)
.. .....++|+|.+..
T Consensus 258 ~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 258 TTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp SCBTTBSSCBSEEEEEETTTC
T ss_pred hhccCcCCCCCEEEEEECCCC
Confidence 21 13457899998754
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=371.78 Aligned_cols=219 Identities=17% Similarity=0.167 Sum_probs=173.5
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeC-----------
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVK----------- 70 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~----------- 70 (491)
.....-|||+||+ ||+|+|+|+|+|++++||||||+++. +.+||++.+||+|+||++|+|+|++.
T Consensus 34 ~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~ 111 (313)
T 3tas_A 34 KGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWR 111 (313)
T ss_dssp TTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCSTTTTCCBCTTCEEEEEEBCCCCEECTTSCEE
T ss_pred cCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCccccCCcCCCCEEEEEEEeccCCcccccccc
Confidence 3445567888776 47888889999999999999999974 46999998999999999999999863
Q ss_pred -CCccceeEeCCcc------ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCce
Q 011178 71 -DQIGSYFYFPSLA------FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 143 (491)
Q Consensus 71 -~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
+++||||||||.. .|+++||+|+|||+++.. . .+|+|++|+++||+
T Consensus 112 ~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~---~~d~e~~l~~~d~t---------------------- 164 (313)
T 3tas_A 112 AGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--V---LPDRTHTIVFNDMT---------------------- 164 (313)
T ss_dssp CCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--B---CCSEEEEEEEETTE----------------------
T ss_pred CCCceEEEEeecCcccccchhhhhccccCceEeecccc--c---cccccceeeccchh----------------------
Confidence 3679999999975 357899999999998753 2 33889988887751
Q ss_pred EEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCc
Q 011178 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQ 223 (491)
Q Consensus 144 ~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g 223 (491)
+||+.
T Consensus 165 --~Ng~~------------------------------------------------------------------------- 169 (313)
T 3tas_A 165 --INNRP------------------------------------------------------------------------- 169 (313)
T ss_dssp --ETTCC-------------------------------------------------------------------------
T ss_pred --cccCC-------------------------------------------------------------------------
Confidence 11110
Q ss_pred ceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEE
Q 011178 224 GYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTI 303 (491)
Q Consensus 224 ~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~ 303 (491)
.+..|
T Consensus 170 ---------------------------------~~~~~------------------------------------------ 174 (313)
T 3tas_A 170 ---------------------------------AHTGP------------------------------------------ 174 (313)
T ss_dssp ---------------------------------TTCCC------------------------------------------
T ss_pred ---------------------------------ccccc------------------------------------------
Confidence 00000
Q ss_pred EEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCC
Q 011178 304 RLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 383 (491)
Q Consensus 304 ~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~ 383 (491)
+ +.++.|++|+|+|.|.+.+
T Consensus 175 ---------------------------~---------------------------------l~v~~Ge~vr~~liN~g~~ 194 (313)
T 3tas_A 175 ---------------------------D---------------------------------FEATVGDRVEFVMITHGEY 194 (313)
T ss_dssp ---------------------------C---------------------------------EEEETTCEEEEEEEEESSC
T ss_pred ---------------------------c---------------------------------cccccCCEEEEEEeccccc
Confidence 0 1234588899999999988
Q ss_pred CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc---cCcceeeeeecchhhhhcceEEE
Q 011178 384 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL---DNVGMWNIRSENWARQYLGQQFY 460 (491)
Q Consensus 384 ~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a---dnpG~w~~HCHil~H~d~GMm~~ 460 (491)
.||||||||.|+|+.++... .....+.++||+.|.|++.+.+++.+ +|||.|+||||+++|++.|||+.
T Consensus 195 ~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~ 266 (313)
T 3tas_A 195 YHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGL 266 (313)
T ss_dssp CEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEE
T ss_pred ceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEE
Confidence 99999999999998875321 12234679999999999988877754 68999999999999999999999
Q ss_pred EEEecCCcc
Q 011178 461 LRVYSSANS 469 (491)
Q Consensus 461 ~~V~~~~~~ 469 (491)
|+|.+++..
T Consensus 267 f~V~~~d~~ 275 (313)
T 3tas_A 267 FLVKKPDGT 275 (313)
T ss_dssp EEEECTTCC
T ss_pred EEEECCCCC
Confidence 999988764
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=370.75 Aligned_cols=110 Identities=17% Similarity=0.186 Sum_probs=91.5
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeC----------
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVK---------- 70 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~---------- 70 (491)
|...+.-|||+||+ ||+|+|+|+|+|++++||||||+++. +++||++.+||+|+||++|+|+|+++
T Consensus 49 ~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~ 126 (299)
T 3t9w_A 49 APGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTLMNGSAVMPGQTRRYTWRSHVGYRRADGSW 126 (299)
T ss_dssp STTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTCCBCTTCEEEEEEBCCCCEECTTSCE
T ss_pred cCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCccccCccCCCCeEEEEEEeecccccCCCcC
Confidence 44567778888886 48889999999999999999999974 56999988999999999999999985
Q ss_pred --CCccceeEeCCcc------ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeee
Q 011178 71 --DQIGSYFYFPSLA------FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGD 119 (491)
Q Consensus 71 --~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d 119 (491)
+++||||||||.. .|+++||+|+|||+++.. . .+|+|++|++++
T Consensus 127 ~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~---~~d~e~~l~~~~ 178 (299)
T 3t9w_A 127 AEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--L---LPKRQFTVVFND 178 (299)
T ss_dssp ECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--C---CCSEEEEEEEET
T ss_pred CCCCceeEEEecCCcccccchhhhcccccceEEEecccc--c---Cccccceeeeee
Confidence 2689999999974 478899999999998653 1 236777776644
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=386.14 Aligned_cols=366 Identities=15% Similarity=0.111 Sum_probs=241.3
Q ss_pred CCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccC
Q 011178 11 GCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 88 (491)
Q Consensus 11 G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 88 (491)
||+|+|. |+|+|+|+|.+...++|||||... .++|+|+||++++|+|++. ++||||||||...|+.+
T Consensus 54 ~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~~~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~ 122 (447)
T 2dv6_A 54 NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSAIVNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQA 122 (447)
T ss_dssp SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECCCBCSTTBEEEEEEECC-SCEEEEEECCSTTHHHH
T ss_pred CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccceecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhC
Confidence 7888774 788999999998889999998631 1589999999999999995 79999999999889999
Q ss_pred CceeEEEEecCCCCCCCCC-----CCCCcceEEeeecccCCHHH--HH-HHHhcCC-CCCCCceEEEcCcCCCcceEEEe
Q 011178 89 GGYGGIKIASRPLIPVPFD-----PPAGDFTILAGDWYKKNHTD--LK-AILDSGS-DLPFPDGLVINGRGSNANTFTVD 159 (491)
Q Consensus 89 Gl~G~liV~~~~~~~~~~~-----~~~~e~~l~l~d~~~~~~~~--~~-~~~~~~~-~~~~~~~~~vNG~~~~~~~~~v~ 159 (491)
||+|.|+|+++.......+ ....+++..+ |+....... +. ....... .....+.+++||+.. .|+|+++
T Consensus 123 Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~p-gp~i~v~ 200 (447)
T 2dv6_A 123 GMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVP-GPFLRVR 200 (447)
T ss_dssp TCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBS-CCCEEEE
T ss_pred CCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEeccCCceeEEEEECCccC-CCeEEec
Confidence 9999999998654221000 0011111111 111100000 00 0000000 112346789999853 5899999
Q ss_pred CCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeecc-CC-
Q 011178 160 QGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT-SQ- 236 (491)
Q Consensus 160 ~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~-~~- 236 (491)
+|++||||++|.+. ...+.++++|. ++.||.+ +.+.|.||||+++++++++ +|+||+.++.... .+
T Consensus 201 ~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~~~ 269 (447)
T 2dv6_A 201 VGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPTHI 269 (447)
T ss_dssp TTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHHHH
T ss_pred CCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHHHH
Confidence 99999999999985 34567777763 3678873 2345999999999999985 6999998875210 11
Q ss_pred CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeE
Q 011178 237 VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQ 316 (491)
Q Consensus 237 ~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 316 (491)
.....+.|.|.... .+|. .+.+..+. .-++..... ....+. ..+.+... ......
T Consensus 270 ~~Gl~g~l~v~~~~-----~~P~---~d~~~~~~---~~~~~~~~~---~~~~g~---------~~~~~~~~--~~~~~~ 324 (447)
T 2dv6_A 270 TNGMYGLLLVEPEG-----GLPQ---VDREFYVM---QGEIYTVKS---FGTSGE---------QEMDYEKL--INEKPE 324 (447)
T ss_dssp HTTCEEEEEEECTT-----CSCC---CSEEEEEE---EEEECBSSC---TTCCEE---------CCBBHHHH--HTTCCS
T ss_pred hCCCEEEEEEeCCC-----CCCC---CCeeEEEE---ecccccCCc---cccccc---------ccCChHHh--hccCCC
Confidence 12345777776432 1221 11110000 000100000 000000 00000000 001234
Q ss_pred eEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCC-CCCCceeccCCCeE
Q 011178 317 RYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPE-DTLQSWHIDGHNFF 395 (491)
Q Consensus 317 ~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~ 395 (491)
.|.|||+.|.... ..++.++.|++++|+|.|.+ ...||||||||+|+
T Consensus 325 ~~~iNG~~~~~~~--------------------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~ 372 (447)
T 2dv6_A 325 YFLFNGSVGSLTR--------------------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFD 372 (447)
T ss_dssp EEEETTSTTCCCC--------------------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEE
T ss_pred EEEECCcccCCCC--------------------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEE
Confidence 6899998763100 12367889999999999987 46799999999999
Q ss_pred EEeeccCCCCCCCCCCcccCCCC-ceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCC
Q 011178 396 AVGMDGGEWTPASRLTYNLRDTI-SRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 396 Vl~~g~g~~~~~~~~~~~~~~p~-~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
||+++++ + +..|. +|||+.|+|+++++|+|+++|||.|+||||+++|++.|||+.|+|..+.
T Consensus 373 vv~~dG~-~---------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 373 HVYSLGS-V---------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPK 435 (447)
T ss_dssp EECGGGC-S---------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCS
T ss_pred EEEcCCc-c---------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCC
Confidence 9999643 2 22344 7999999999999999999999999999999999999999999997544
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-46 Score=361.63 Aligned_cols=220 Identities=16% Similarity=0.174 Sum_probs=176.9
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCC---------
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKD--------- 71 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~--------- 71 (491)
|-+++..+||+||+. |+|+|+|+|+|++++||||||+++.. ++||++.+||+|+||++|+|+|++.+
T Consensus 27 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~ 104 (276)
T 3kw8_A 27 EKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTW 104 (276)
T ss_dssp STTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCE
T ss_pred eccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCCcCCCCCCCEEEEEEEcCCccccccCcc
Confidence 446788999999874 89999999999999999999999854 69999988999999999999999963
Q ss_pred ---CccceeEeCCcc------ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCc
Q 011178 72 ---QIGSYFYFPSLA------FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPD 142 (491)
Q Consensus 72 ---~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~ 142 (491)
++||||||||.+ .|+++||+|+|||++++.. . .|+|++|+++||
T Consensus 105 ~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~--~---~drE~~l~l~~~---------------------- 157 (276)
T 3kw8_A 105 RPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIVFNDM---------------------- 157 (276)
T ss_dssp ECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEEEETT----------------------
T ss_pred CCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc--c---cccceEEEeccc----------------------
Confidence 379999999984 5899999999999997632 1 267777765331
Q ss_pred eEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCC
Q 011178 143 GLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPP 222 (491)
Q Consensus 143 ~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~ 222 (491)
+|||+.
T Consensus 158 --~iNG~~------------------------------------------------------------------------ 163 (276)
T 3kw8_A 158 --TINNRK------------------------------------------------------------------------ 163 (276)
T ss_dssp --EETTCC------------------------------------------------------------------------
T ss_pred --ccceec------------------------------------------------------------------------
Confidence 111111
Q ss_pred cceEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceE
Q 011178 223 QGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHT 302 (491)
Q Consensus 223 g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 302 (491)
T Consensus 164 -------------------------------------------------------------------------------- 163 (276)
T 3kw8_A 164 -------------------------------------------------------------------------------- 163 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCC
Q 011178 303 IRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPED 382 (491)
Q Consensus 303 ~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~ 382 (491)
|. . ...+.++.|++|+|+|.|.+.
T Consensus 164 ----------------------~~--~--------------------------------~p~i~v~~G~~vri~l~N~~~ 187 (276)
T 3kw8_A 164 ----------------------PH--T--------------------------------GPDFEATVGDRVEIVMITHGE 187 (276)
T ss_dssp ----------------------TT--C--------------------------------CCCEEEETTCEEEEEEEEESS
T ss_pred ----------------------cc--C--------------------------------CCCEEEecCCEEEEEEecCCC
Confidence 00 0 001345678999999999988
Q ss_pred CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEcc---CcceeeeeecchhhhhcceEE
Q 011178 383 TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLD---NVGMWNIRSENWARQYLGQQF 459 (491)
Q Consensus 383 ~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~ad---npG~w~~HCHil~H~d~GMm~ 459 (491)
+.|||||||+.|++++. |.+... ...+.++||+.|.|++.+.++|+++ |||.|+||||+++|++.|||.
T Consensus 188 ~~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g 259 (276)
T 3kw8_A 188 YYHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVG 259 (276)
T ss_dssp CCEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEE
T ss_pred cceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeE
Confidence 89999999999999764 333211 1224699999999999999999997 899999999999999999999
Q ss_pred EEEEecCCcc
Q 011178 460 YLRVYSSANS 469 (491)
Q Consensus 460 ~~~V~~~~~~ 469 (491)
.|+|.++++.
T Consensus 260 ~~~V~~~~~~ 269 (276)
T 3kw8_A 260 LFLVKKPDGT 269 (276)
T ss_dssp EEEEECTTSC
T ss_pred EEEEeCCCCC
Confidence 9999887653
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=368.60 Aligned_cols=241 Identities=20% Similarity=0.318 Sum_probs=196.2
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|..++..+||+|++ ||+|+|+|+|.++++++|||||+++.+++|+||+++ +||+|+||++|+|+|++. ++||||||
T Consensus 26 ~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~-~~Gt~wyH 104 (339)
T 2zwn_A 26 FGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKAD-RIGTLWYH 104 (339)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECC-SCEEEEEE
T ss_pred EEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECC-CCEEEEEE
Confidence 34567778999987 489999999999999999999999999999999998 999999999999999994 89999999
Q ss_pred CCccc--ccc-CCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC-cce
Q 011178 80 PSLAF--HKA-AGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN-ANT 155 (491)
Q Consensus 80 ~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~-~~~ 155 (491)
||... |+. +||+|+|||++++....+. ..++|++++|+||+....... ...+.....++.++|||+.+. ...
T Consensus 105 ~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~~---~~~g~~~~~~~~~~ING~~~~~~~~ 180 (339)
T 2zwn_A 105 CHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADKY---GEGGTPMNVADYFSVNAKSFPLTQP 180 (339)
T ss_dssp CCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTCT---TCCCSTTSCCCEEEETTBCTTSSCC
T ss_pred ecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheeccccccc---CCCCCCccccceEEEccccCCCccc
Confidence 99874 888 9999999999865422111 347899999999987421100 001112235789999999841 234
Q ss_pred EEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCC-CCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeecc
Q 011178 156 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTL-QNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFT 234 (491)
Q Consensus 156 ~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~-p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~ 234 (491)
+++++|++|||||+|++.. .+.|+|+||.|+||+.||.+++ |...+++.|+||||+||+|+++ .+|.|.+.+.....
T Consensus 181 ~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H 258 (339)
T 2zwn_A 181 LRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEAD-NPGRFIFHDHVDTH 258 (339)
T ss_dssp EEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEECCGGG
T ss_pred EEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeC-CCeeEEEEEechhh
Confidence 9999999999999999955 8999999999999999999885 7788999999999999999998 57998888775432
Q ss_pred ---C--CCcceEEEEEecCCC
Q 011178 235 ---S--QVLSATSVLHYSNSA 250 (491)
Q Consensus 235 ---~--~~~~~~ail~y~~~~ 250 (491)
. ......++|+|.+..
T Consensus 259 ~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 259 VTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp SCBTTBSSCSSEEEEEETTSC
T ss_pred cccccccCCCcEEEEEECCCC
Confidence 0 223457899998654
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-45 Score=411.97 Aligned_cols=366 Identities=10% Similarity=0.058 Sum_probs=237.4
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCC-CCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRR-NSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGI 94 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~-~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l 94 (491)
||+|.++|.|. .+.+||||+++.+ +.++||++. | |+|.||.+|+|+|++ +++||||||||.+.|+.+||.|+|
T Consensus 639 gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~~~Gt~~~h~h~~~~~~~Gm~g~~ 713 (1065)
T 2j5w_A 639 GDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-DTEGTFNVECLTTDHYTGGMKQKY 713 (1065)
T ss_dssp TCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-CSCEEEEEEECSHHHHHTTCEEEE
T ss_pred CCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-CCCeEEEEecCCCcccCCCcEEEE
Confidence 45666679876 5569999999998 999999998 7 999999999999999 599999999999999999999999
Q ss_pred EEecCCCCCCCCCCCCCcceEEe----eecccCCHHHHHH-HHh-cCCC----------CCCCc------eEEEcCcC--
Q 011178 95 KIASRPLIPVPFDPPAGDFTILA----GDWYKKNHTDLKA-ILD-SGSD----------LPFPD------GLVINGRG-- 150 (491)
Q Consensus 95 iV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~-~~~-~~~~----------~~~~~------~~~vNG~~-- 150 (491)
+|++......++..++.|.+++| +||++.....+.. +.. .+.. ...+. ++-+.+..
T Consensus 714 ~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~p~~~~~n~~~~~iG~tY~k~~y~~~~d~tft 793 (1065)
T 2j5w_A 714 TVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFLDKGEFYIGSKYKKVVYRQYTDSTFR 793 (1065)
T ss_dssp EEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCCCCCTTTCCTTTCCCSEEEEEEEEEESSTTCC
T ss_pred EEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccCccceeecCCCccccceEeeeEEEEEcCCcce
Confidence 99987543334336678899999 8999987654321 111 1110 00011 11122111
Q ss_pred -------------CCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEE
Q 011178 151 -------------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVR 217 (491)
Q Consensus 151 -------------~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~ 217 (491)
...|+|.+++|+++++|+.|... ..+.++.+|. .+.+. | ...+.||+++...+.
T Consensus 794 ~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl--~~~~~-~---------~~~i~PG~~~ty~~~ 860 (1065)
T 2j5w_A 794 VPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGV--QTESS-T---------VTPTLPGETLTYVWK 860 (1065)
T ss_dssp SBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSC--BCSCS-C---------CCCBCTTCEEEEEEE
T ss_pred ecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccc--cccCC-C---------CceeCCCCeEEEEEE
Confidence 12489999999999999999965 4666666663 33222 1 225679999888888
Q ss_pred eCCC---------CcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhh--h-hhhccCCCCC--
Q 011178 218 ADQP---------PQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQ--A-RSLRRNLTAS-- 282 (491)
Q Consensus 218 ~~~~---------~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~--~-~~~~~~l~~~-- 282 (491)
+.+. +|.||...+.....+. ....+.|.+....... ....| .+.+..+.. . ....+.+...
T Consensus 861 ~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~---~~~~~-~d~D~~l~~~~~d~~~~~y~~~n~~ 936 (1065)
T 2j5w_A 861 IPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK---VFNPR-RKLEFALLFLVFDENESWYLDDNIK 936 (1065)
T ss_dssp CCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC--------CCC-CEEEEEEEEEEEEGGGSTTHHHHHH
T ss_pred ecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc---ccCCC-cceEEEEEEEeecCCcceeeccCcc
Confidence 7642 2578876553211111 1223444443221100 00011 121110000 0 0000000000
Q ss_pred CCCCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceee
Q 011178 283 GPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQT 362 (491)
Q Consensus 283 ~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 362 (491)
...+.|.. ...... .+ ......|.|||+.|.. .
T Consensus 937 ~~~~~P~~------v~~~~~-~~------~~~~~~~~iNG~~~~~----------------------------------~ 969 (1065)
T 2j5w_A 937 TYSDHPEK------VNKDDE-EF------IESNKMHAINGRMFGN----------------------------------L 969 (1065)
T ss_dssp HHCSCGGG------CCTTCH-HH------HHHTEEEEETTBCTTC----------------------------------C
T ss_pred cccCCccc------cCcchh-hh------hccCceEEECCccCCC----------------------------------C
Confidence 00000000 000000 00 0012357888887631 1
Q ss_pred eEEeecCCcEEEEEEEcCC--CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc
Q 011178 363 SVMAADFRGFAEVVFENPE--DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV 440 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp 440 (491)
..+.++.|++|+|+|.|.+ .+.||||||||.|+|++++ |.||||+.|+|+++++|+|+||||
T Consensus 970 ~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~p 1033 (1065)
T 2j5w_A 970 QGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTP 1033 (1065)
T ss_dssp CCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSC
T ss_pred ccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCC
Confidence 2256789999999999985 4689999999999998763 569999999999999999999999
Q ss_pred ceeeeeecchhhhhcceEEEEEEecCC
Q 011178 441 GMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 441 G~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
|.|+||||+++|++.|||+.|+|.+.+
T Consensus 1034 G~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1034 GIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp EEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred eeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 999999999999999999999998654
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=347.98 Aligned_cols=217 Identities=18% Similarity=0.214 Sum_probs=176.1
Q ss_pred CcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCC-----------
Q 011178 5 NHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKD----------- 71 (491)
Q Consensus 5 ~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~----------- 71 (491)
.+...+||+|++ ||+|+|+|+|.++++++|||||+.+. .++||++.+||+|+||++|+|+|++.+
T Consensus 70 ~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 70 GKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp TCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred CCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcccccccccCCCEEEEEEEeCCCCcccccccCC
Confidence 357789999987 48999999999999999999999975 579999988999999999999999942
Q ss_pred -CccceeEeCCc------cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceE
Q 011178 72 -QIGSYFYFPSL------AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGL 144 (491)
Q Consensus 72 -~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
++||||||||. ..|+.+||+|+|||+++... . .|+|++|+++||
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~---pd~e~~l~~~d~------------------------ 198 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIVFNDM------------------------ 198 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEEEETT------------------------
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C---CCceEEEEcccc------------------------
Confidence 35999999997 26899999999999987532 1 367888877664
Q ss_pred EEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcc
Q 011178 145 VINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG 224 (491)
Q Consensus 145 ~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~ 224 (491)
+|||+.
T Consensus 199 ~iNG~~-------------------------------------------------------------------------- 204 (343)
T 3cg8_A 199 TINNRK-------------------------------------------------------------------------- 204 (343)
T ss_dssp EETTCC--------------------------------------------------------------------------
T ss_pred eecccC--------------------------------------------------------------------------
Confidence 455543
Q ss_pred eEEEEEeeccCCCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccccceEEE
Q 011178 225 YYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIR 304 (491)
Q Consensus 225 ~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 304 (491)
.+..
T Consensus 205 --------------------------------~~~~-------------------------------------------- 208 (343)
T 3cg8_A 205 --------------------------------PHTG-------------------------------------------- 208 (343)
T ss_dssp --------------------------------TTCC--------------------------------------------
T ss_pred --------------------------------CCCC--------------------------------------------
Confidence 0000
Q ss_pred EeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCCC
Q 011178 305 LQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTL 384 (491)
Q Consensus 305 l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~ 384 (491)
| .+.++.|++|+|+|.|.+.+.
T Consensus 209 --------------------------~--------------------------------~l~v~~Ge~vri~l~N~g~~~ 230 (343)
T 3cg8_A 209 --------------------------P--------------------------------DFEATVGDRVEIVMITHGEYY 230 (343)
T ss_dssp --------------------------C--------------------------------CEEEETTCEEEEEEEEESSCC
T ss_pred --------------------------c--------------------------------cEEeCCCCEEEEEEEcCCccc
Confidence 0 023466899999999998889
Q ss_pred CceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc---cCcceeeeeecchhhhhcceEEEE
Q 011178 385 QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL---DNVGMWNIRSENWARQYLGQQFYL 461 (491)
Q Consensus 385 HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a---dnpG~w~~HCHil~H~d~GMm~~~ 461 (491)
||||||||.|+|+.. |.+.. ....+.|+||+.|.|++++.|+|++ ++||.|+||||+++|++.|||..|
T Consensus 231 HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~ 302 (343)
T 3cg8_A 231 HTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLF 302 (343)
T ss_dssp EEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEE
T ss_pred cccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEE
Confidence 999999999999743 33321 1123578999999999999999995 899999999999999999999999
Q ss_pred EEecCCc
Q 011178 462 RVYSSAN 468 (491)
Q Consensus 462 ~V~~~~~ 468 (491)
.|.+++.
T Consensus 303 ~V~~~~~ 309 (343)
T 3cg8_A 303 LVKKPDG 309 (343)
T ss_dssp EEECTTS
T ss_pred EEecCCC
Confidence 9987654
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-43 Score=347.48 Aligned_cols=231 Identities=22% Similarity=0.295 Sum_probs=191.0
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeE
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFY 78 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wY 78 (491)
|-.++..+||+|+|. |+|+|+|+|.++ .+++|||||+.+ +||++. +..|.||++|+|+|++ +++|||||
T Consensus 61 ~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~-~~~i~PG~~~~y~f~~-~~~Gt~wy 133 (327)
T 1kbv_A 61 WTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA-ATFTAPGRTSTFSFKA-LQPGLYIY 133 (327)
T ss_dssp EEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT-TTCBCTTEEEEEEEEC-CSCEEEEE
T ss_pred EEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc-ceeecCCCEEEEEEEC-CCCeEEEE
Confidence 445677899999884 899999999997 589999999962 788875 2349999999999999 58999999
Q ss_pred eCCc---cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHH--------HHHHHhcCCCCCCCceEEEc
Q 011178 79 FPSL---AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD--------LKAILDSGSDLPFPDGLVIN 147 (491)
Q Consensus 79 H~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~vN 147 (491)
|||. ..|+++||+|+|||++++. .+.+|+|++|+++||+++.... ..... ...++.++||
T Consensus 134 H~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~iN 204 (327)
T 1kbv_A 134 HCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAV-----AEQPEYVVFN 204 (327)
T ss_dssp ECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH-----HTCCSEEEET
T ss_pred EeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccccccccccChhHhc-----cCCCceEEEc
Confidence 9997 4799999999999998642 2245899999999999875210 11111 1357899999
Q ss_pred CcCCCc---ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcc
Q 011178 148 GRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG 224 (491)
Q Consensus 148 G~~~~~---~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~ 224 (491)
|+.... +.+++++|++|||||+|+|..+.+.|+|+||.|+||+.||.+++|..++++.|+||||+||+|++++ +|.
T Consensus 205 G~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~ 283 (327)
T 1kbv_A 205 GHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGN 283 (327)
T ss_dssp TSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEE
T ss_pred CcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-CeE
Confidence 998421 5799999999999999999988999999999999999999999999999999999999999999994 799
Q ss_pred eEEEEEeeccCCCcceEEEEEecCCC
Q 011178 225 YYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 225 ~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
|+|++............|+|+|.+..
T Consensus 284 y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 284 YTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEEeccccccccCCcEEEEEECCCC
Confidence 99998765431123468999998764
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=329.75 Aligned_cols=208 Identities=20% Similarity=0.234 Sum_probs=178.4
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++..+||+|++. |+|+|+|+|+|+.+++|||||++ .+++||+++ +||+|+||++++|+|++ +++||||||
T Consensus 57 ~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~~i~PG~~~~y~f~~-~~~Gt~~yH 132 (288)
T 3gdc_A 57 WSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGAGSIAPGQSFTYEFDA-TPFGTHLYH 132 (288)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTTCSBCTTCEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccceeECCCCEEEEEEEc-CCCccEEEE
Confidence 445677899999874 89999999999999999999997 357999999 99999999999999999 699999999
Q ss_pred CCcc---ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCCC--cc
Q 011178 80 PSLA---FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN--AN 154 (491)
Q Consensus 80 ~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~--~~ 154 (491)
||.. .|+++||+|+|||++++..+ ..++|++|+++||+.++ ...++.++|||+.+. .+
T Consensus 133 ~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~-------------g~~~~~~~iNG~~~~~~~~ 195 (288)
T 3gdc_A 133 CHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG-------------GDDNEFYSVNGLPFHFMDF 195 (288)
T ss_dssp CCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-------------TTCCSEEEETTSTTHHHHS
T ss_pred ecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-------------CCCcceEEECcccccccCc
Confidence 9997 69999999999999876432 34799999999999872 124679999999842 24
Q ss_pred eEEEeCCCEEEEEEEEcCCCC-eEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 155 TFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 155 ~~~v~~g~~~rlR~iN~~~~~-~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
.+++++|++||||++|++... .+.|+|+||.|+|++.++....+...+++.|.||||++|+++++ .+|.|.+.++..
T Consensus 196 ~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 196 PVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp CEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCC-SCEEEEEECSSH
T ss_pred ccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECC-CCEEEEEEecCh
Confidence 799999999999999999654 79999999999999844433356778999999999999999999 689999887643
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=338.94 Aligned_cols=231 Identities=22% Similarity=0.276 Sum_probs=191.4
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeE
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFY 78 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wY 78 (491)
|..++..+||+|++. |+|+|+|+|.++ .+++|||||+.+ +||++.+ .+|.||++++|+|++ +++|||||
T Consensus 51 ~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~~~-~~i~pg~~~~y~f~~-~~~Gt~~y 123 (442)
T 2zoo_A 51 WSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGAES-SFTAPGHTSTFNFKA-LNPGLYIY 123 (442)
T ss_dssp EEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG-CCBCTTCEEEEEEEC-CSCEEEEE
T ss_pred EEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCCcc-EEECCCCEEEEEEEc-CCCeEEEE
Confidence 445677789999884 899999999986 499999999973 6888762 259999999999999 58999999
Q ss_pred eCCc---cccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHHH--------HHHHHhcCCCCCCCceEEEc
Q 011178 79 FPSL---AFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTD--------LKAILDSGSDLPFPDGLVIN 147 (491)
Q Consensus 79 H~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~vN 147 (491)
|||. ..|+.+||+|+|||++++.. +.+|+|++|+++||+++.... ... + ....+++++||
T Consensus 124 H~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~liN 194 (442)
T 2zoo_A 124 HCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFGEAGLQPFDMAK-A----IDEDADYVVFN 194 (442)
T ss_dssp ECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTCCEEECBCHHH-H----HTTCCSEEEET
T ss_pred ecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCcccccccccCChhH-h----ccCCCCEEEEC
Confidence 9975 48999999999999986532 245899999999999875310 111 1 12467899999
Q ss_pred CcCCCc---ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcc
Q 011178 148 GRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG 224 (491)
Q Consensus 148 G~~~~~---~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~ 224 (491)
|+.... +.|++++|++|||||+|+|....+.|+|+||.|+||+.||.+++|..++++.|.||||+||+|+++ .+|.
T Consensus 195 G~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~ 273 (442)
T 2zoo_A 195 GSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGT 273 (442)
T ss_dssp TSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECC-SCEE
T ss_pred CCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcC-CCCe
Confidence 998421 689999999999999999988899999999999999999999999999999999999999999999 4799
Q ss_pred eEEEEEeeccCCCcceEEEEEecCCC
Q 011178 225 YYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 225 ~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
|++++............++|+|.+..
T Consensus 274 y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 274 FILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEEEecccccccccCceEEEEecCCC
Confidence 99998764321123568999998765
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=350.37 Aligned_cols=232 Identities=15% Similarity=0.175 Sum_probs=171.6
Q ss_pred cccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-C--------CCCCCCCCeEEEEEEeCCC--
Q 011178 6 HFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-T--------NCPIPPGKNFTYVLQVKDQ-- 72 (491)
Q Consensus 6 ~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~--------q~~i~PG~~~~Y~f~~~~~-- 72 (491)
++..|||+|++ ||+|+|+|+|+|+++++|||||++++ ++|||+++ + ||+|+||++|+|+|+++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 56788999987 48999999999999999999999985 46999997 6 9999999999999999754
Q ss_pred ---cc----ceeEeCCcc--ccccCCceeEEEEecCCCCCC--CCCCCCCcceEEee------ecccCCHHHHH-HHHhc
Q 011178 73 ---IG----SYFYFPSLA--FHKAAGGYGGIKIASRPLIPV--PFDPPAGDFTILAG------DWYKKNHTDLK-AILDS 134 (491)
Q Consensus 73 ---~G----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~-~~~~~ 134 (491)
+| |||||||.+ .|+++||+|+|||++++.... ..+..++|++|+|+ ||+++...... ..++
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~- 219 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRAS- 219 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCC-
Confidence 57 999999996 799999999999999754211 12234689999999 78877543210 0011
Q ss_pred CCCCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCC-eEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEE
Q 011178 135 GSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGIST-SINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYS 213 (491)
Q Consensus 135 ~~~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~-~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~d 213 (491)
......++.++|||+.+..|.+++++|++|||||+|++... .+.|+++||.|+|++.||. .++++.|+||||+|
T Consensus 220 ~~~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~ 294 (647)
T 1sdd_B 220 SEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKT 294 (647)
T ss_dssp ----CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEE
T ss_pred cchhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEE
Confidence 11234578999999984358999999999999999999864 8999999999999999864 57999999999999
Q ss_pred EEEEeCCCCcceEEEEEeeccCCCcceEEEEEec
Q 011178 214 VLVRADQPPQGYYIVISTRFTSQVLSATSVLHYS 247 (491)
Q Consensus 214 v~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~ 247 (491)
|+|++++ +|.|.+.++..... .....+++.+.
T Consensus 295 v~~~~~~-pG~w~~hch~~~h~-~~Gm~~~~~V~ 326 (647)
T 1sdd_B 295 LEMKASK-PGWWLLDTEVGEIQ-RAGMQTPFLIV 326 (647)
T ss_dssp EEEECCS-SEEEEEECCCHHHH-TTTCEEEEEEE
T ss_pred EEEEecc-ceEeecccCccccc-ccccccceeee
Confidence 9999994 79988877753211 12334555554
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=319.16 Aligned_cols=236 Identities=20% Similarity=0.209 Sum_probs=179.4
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|..++..+||+|++ ||+|+|+|+|++ +++||||+++.+.+++||... ++ |+||++|+|+|++ +++||||||
T Consensus 56 ~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~~-~~~Gt~~yH 129 (336)
T 1oe1_A 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPA---TNAMPHNVDFHGATGALGGAKLTN--VNPGEQATLRFKA-DRSGTFVYH 129 (336)
T ss_dssp EEETTBSSCCCEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCCeEEEcCCCEEEEEEEcCC---CCCccccceECCCCCCCCCcceEE--eCCCCEEEEEEEC-CCCeEEEEe
Confidence 44567778999987 489999999997 456777777666556777665 65 9999999999999 589999999
Q ss_pred CCcc----ccccCCceeEEEEecCCCCC----CCCCCCCCcceEEeeecccCC--HHHH----------HHHHhcCCCCC
Q 011178 80 PSLA----FHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWYKKN--HTDL----------KAILDSGSDLP 139 (491)
Q Consensus 80 ~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~--~~~~----------~~~~~~~~~~~ 139 (491)
||.+ .|+++||+|+|||++++..+ .+. .+|+|++|+++||++.. .+.+ ...++. ....
T Consensus 130 ~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~ 207 (336)
T 1oe1_A 130 CAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-MRTL 207 (336)
T ss_dssp CCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-HHTT
T ss_pred cCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeeccccCCceeecccccccccchhhH-hhcC
Confidence 9985 69999999999999865321 122 46899999999999842 1111 000000 0134
Q ss_pred CCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcCCCCeEeEE-EeCceeEEEEecCccCCCCc--cCeEEEcCCceEE
Q 011178 140 FPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINFR-IQGHKMLLVEVEGTHTLQNT--YDSLDIHLGQSYS 213 (491)
Q Consensus 140 ~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~~~~~~~~~-i~~~~~~via~DG~~~~p~~--~~~l~l~pGeR~d 213 (491)
.++.++|||+... .+.++|++|++||| +|++..+.+.|+ |++|.|+|++ ||.+++|.. ++++.|+||||+|
T Consensus 208 ~~~~~liNG~~~~~~~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~d 284 (336)
T 1oe1_A 208 TPSHIVFNGKVGALTGANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGA 284 (336)
T ss_dssp CCSEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEE
T ss_pred CCCEEEECCeeccCCCCcceEcCCCCEEEE--EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEE
Confidence 6789999999842 38899999997765 677766666655 5999999997 999997753 5899999999999
Q ss_pred EEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 214 VLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 214 v~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
|+|++++ +|+|++.++...........|+++|.+..
T Consensus 285 vlv~~~~-pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 285 ALYTFKQ-PGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEECCS-CEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEEcCC-CceEEEEechhhccccCCCeEEEEECCCC
Confidence 9999995 79999998864321123567899998655
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=310.97 Aligned_cols=236 Identities=20% Similarity=0.195 Sum_probs=179.0
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++..+||+|++. |+|+|+|+|+ .+++||||+++.+...+||.+. ++ |+||++|+|+|++ +++||||||
T Consensus 55 ~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~-~~~Gt~~yH 128 (333)
T 1mzy_A 55 MTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKA-TRAGAFVYH 128 (333)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCceeE--eCCCCEEEEEEEC-CCCEEEEEe
Confidence 344667789999874 8999999999 6899999999876544555555 54 9999999999999 589999999
Q ss_pred CCcc-----ccccCCceeEEEEecCCCCC----CCCCCCCCcceEEeeecccCC--HHHH----------HHHHhcCCCC
Q 011178 80 PSLA-----FHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWYKKN--HTDL----------KAILDSGSDL 138 (491)
Q Consensus 80 ~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~--~~~~----------~~~~~~~~~~ 138 (491)
||.+ .|+++||+|+|||++++..+ .++ .+|+|++|+++||++.. ...+ ...+.. ...
T Consensus 129 ~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~ 206 (333)
T 1mzy_A 129 CAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAV-MDT 206 (333)
T ss_dssp CCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHH-HTT
T ss_pred ecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeeccCccccccccccccccccccchhHH-hhc
Confidence 9987 69999999999999765321 122 45899999999999831 1111 000110 012
Q ss_pred CCCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcCCCCeEeE-EEeCceeEEEEecCccCCCC--ccCeEEEcCCceE
Q 011178 139 PFPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINF-RIQGHKMLLVEVEGTHTLQN--TYDSLDIHLGQSY 212 (491)
Q Consensus 139 ~~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~~~~~~~~-~i~~~~~~via~DG~~~~p~--~~~~l~l~pGeR~ 212 (491)
..++.++|||+... .+.++|++|++||||.+|++. .+.| .+++|.++|++ ||.++++. .++++.|+||||+
T Consensus 207 ~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~--~~~~h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~ 283 (333)
T 1mzy_A 207 LIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNR--DSRPHLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAG 283 (333)
T ss_dssp TCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSS--CBCEEEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEE
T ss_pred cCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCC--ccccEEECCCCeEEEe-CCcccCCCccCcceEEECCCceE
Confidence 56789999999742 367999999988877666553 3333 37889999999 99998653 3799999999999
Q ss_pred EEEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 213 SVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 213 dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
||+|++++ +|+|++.++...........++++|.+..
T Consensus 284 ~v~v~a~~-pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 284 AALYKFLQ-PGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EEEEECCS-CEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEEEEcCC-CEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 99999995 79999998865321124577899998654
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=319.75 Aligned_cols=204 Identities=12% Similarity=0.144 Sum_probs=151.5
Q ss_pred cCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCC----CCCCCCCCCCC-C--CCCCCCCCeEEEEEEeCCC------
Q 011178 8 SSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQ----RRNSWQDGVYG-T--NCPIPPGKNFTYVLQVKDQ------ 72 (491)
Q Consensus 8 ~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~----~~~~~~DG~~~-~--q~~i~PG~~~~Y~f~~~~~------ 72 (491)
..+||+|++ ||+|+|+|+|+|++++||||||+++ .+.+++||+++ + ||+|+||++|+|+|+++++
T Consensus 56 ~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~ 135 (306)
T 1sdd_A 56 GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHD 135 (306)
T ss_dssp CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSS
T ss_pred CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCC
Confidence 568888887 4888999999999999999999994 34455555543 2 7999999999999999644
Q ss_pred ---ccceeEeCCccc--cccCCceeEEEEecCCCC---CCCCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceE
Q 011178 73 ---IGSYFYFPSLAF--HKAAGGYGGIKIASRPLI---PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGL 144 (491)
Q Consensus 73 ---~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
+||||||||... |+++||+|+|||+++... +.+. ..|+|++|+++||..+.. .....++.+
T Consensus 136 d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~----------~~~~~~~~~ 204 (306)
T 1sdd_A 136 DPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS----------WNQTSSLMY 204 (306)
T ss_dssp SCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS----------SSCCCCEEE
T ss_pred CCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc----------cccCCCcce
Confidence 379999999875 889999999999987431 1222 458999999999853211 012346789
Q ss_pred EEcCcCC-CcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCC
Q 011178 145 VINGRGS-NANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPP 222 (491)
Q Consensus 145 ~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~ 222 (491)
+|||+.+ ..|.+++++|++|||||+|+|.. ..+.|+++||.|.+ ||. ..+++.|.||||+|++|+++ .+
T Consensus 205 ~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv~l~pger~~v~~~~~-~p 275 (306)
T 1sdd_A 205 TVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAITLVSATSTTANMTVS-PE 275 (306)
T ss_dssp CSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCCCEETTCCBC---------
T ss_pred eeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceEEECCCcEEEEEEEcC-CC
Confidence 9999984 23889999999999999999986 67889999999885 884 47899999999999999998 57
Q ss_pred cceEEEEEe
Q 011178 223 QGYYIVIST 231 (491)
Q Consensus 223 g~~~i~~~~ 231 (491)
|.|++.++.
T Consensus 276 G~~~~hch~ 284 (306)
T 1sdd_A 276 GRWTIASLI 284 (306)
T ss_dssp CCCCCBCCS
T ss_pred eEEEEEeCC
Confidence 999887764
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-38 Score=314.72 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=176.6
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|..++..+||+|++. |+|+|+|+|.+ +++||||+++.+....||... ++ |.||++|+|+|++. ++||||||
T Consensus 62 ~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~~~-~~Gt~wyH 135 (340)
T 2bw4_A 62 MTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKAT-KPGVFVYH 135 (340)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECC-SCEEEEEE
T ss_pred EEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCccceE--eCCCCEEEEEEECC-CCeEEEEE
Confidence 345667889999874 89999999998 789999998766544444443 54 99999999999995 79999999
Q ss_pred CCcc----ccccCCceeEEEEecCCCCC----CCCCCCCCcceEEeeecccC--CHHHH----------HHHHhcCCCCC
Q 011178 80 PSLA----FHKAAGGYGGIKIASRPLIP----VPFDPPAGDFTILAGDWYKK--NHTDL----------KAILDSGSDLP 139 (491)
Q Consensus 80 ~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~--~~~~~----------~~~~~~~~~~~ 139 (491)
||.+ .|+++||+|+|||++++..+ .+. .+|+|++|+++||++. .++.+ ...++. ....
T Consensus 136 ~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~ 213 (340)
T 2bw4_A 136 CAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-MRTL 213 (340)
T ss_dssp CCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-HHTT
T ss_pred cCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeeccccCCcccccccccccccchhhH-hhcC
Confidence 9986 69999999999999865311 122 4589999999999983 21111 000100 0124
Q ss_pred CCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcCCCCeEeE-EEeCceeEEEEecCccCCCC--ccCeEEEcCCceEE
Q 011178 140 FPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSINF-RIQGHKMLLVEVEGTHTLQN--TYDSLDIHLGQSYS 213 (491)
Q Consensus 140 ~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~~~~~~~~-~i~~~~~~via~DG~~~~p~--~~~~l~l~pGeR~d 213 (491)
.++.++|||+... .+.+++++|++|||+++|++ +.+.+ ++++|.|+|++ ||.++.+. .++++.|+||||+|
T Consensus 214 ~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~--~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~ 290 (340)
T 2bw4_A 214 TPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQAN--RDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGA 290 (340)
T ss_dssp CCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESS--SCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEE
T ss_pred CCCEEEECCccCCccCCCceEcCCCCEEEEEECCCC--CccceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEE
Confidence 6789999999842 28899999998776655544 44444 47899999997 99988553 47999999999999
Q ss_pred EEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 214 VLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 214 v~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
|+|++++ +|+|++.++...........++++|.+..
T Consensus 291 v~v~~~~-pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 291 AFYTFRQ-PGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EEEECCS-CEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEECCC-CeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 9999995 79999998765311123457889998654
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=339.05 Aligned_cols=218 Identities=12% Similarity=0.113 Sum_probs=170.6
Q ss_pred cccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCC---------Ccc
Q 011178 6 HFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKD---------QIG 74 (491)
Q Consensus 6 ~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~---------~~G 74 (491)
|+..+||+||+ ||+|+|+|+|+|+++++|||||++++.... ||++++||+|+||++|+|+|++++ ++|
T Consensus 193 ~l~~pGP~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 193 HLGLLGPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp TCCSCCCCCCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred ccCCCCCeEEEEcCCEEEEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 44556676664 466788899999999999999999987743 699889999999999999999974 899
Q ss_pred ceeEeCCccc--cccCCceeEEEEecCCCCCC--CCCCCCCcceEEeee------cccCCHHHHHHHHh-cCC----C--
Q 011178 75 SYFYFPSLAF--HKAAGGYGGIKIASRPLIPV--PFDPPAGDFTILAGD------WYKKNHTDLKAILD-SGS----D-- 137 (491)
Q Consensus 75 t~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~-~~~----~-- 137 (491)
|||||||.+. |+++||+|+|||++++.... .....++|++|++++ |+++... ..+.. ... .
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~ 349 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPT 349 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSS
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCcc
Confidence 9999999985 89999999999999754211 112457899988754 5444221 00000 000 0
Q ss_pred -CCCCceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEE
Q 011178 138 -LPFPDGLVINGRGS-NANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSV 214 (491)
Q Consensus 138 -~~~~~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv 214 (491)
....+.++|||+.+ ..+.+++++|++|||||+|++.. ..+.|||+||.|+|++.||. ..+++.|.||||++|
T Consensus 350 ~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v 424 (770)
T 2r7e_B 350 FKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETV 424 (770)
T ss_dssp STTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEE
T ss_pred ccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEE
Confidence 11235689999985 34789999999999999999865 47999999999999999974 679999999999999
Q ss_pred EEEeCCCCcceEEEEEee
Q 011178 215 LVRADQPPQGYYIVISTR 232 (491)
Q Consensus 215 ~v~~~~~~g~~~i~~~~~ 232 (491)
+|+++ .+|.|.+.++..
T Consensus 425 ~~~ad-~pG~w~~hcH~~ 441 (770)
T 2r7e_B 425 EMLPS-KAGIWRVECLIG 441 (770)
T ss_dssp EECCS-SCBCCCBCCCSH
T ss_pred EEEeC-CCCceEEEeccc
Confidence 99999 579988877653
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=298.09 Aligned_cols=229 Identities=17% Similarity=0.205 Sum_probs=185.5
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCcccee
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~w 77 (491)
|..++..+||+|++ ||+++|+|+|.++ ..++|||||+.+ +||++. ++ |.||++++|.|++. ++||||
T Consensus 186 ~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~~~--i~pG~~~~~~~~~~-~~G~~~ 257 (447)
T 2dv6_A 186 WTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAFTQ--TDPGEETVVTFKAL-IPGIYV 257 (447)
T ss_dssp EEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGGCC--BCTTCEEEEEEECC-SCEEEE
T ss_pred EEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCccEE--eCCCCEEEEEEECC-CCeEEE
Confidence 34456678999987 5899999999986 578999999852 799876 54 99999999999994 899999
Q ss_pred EeCCcc---ccccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCHH--------HHHHHHhcCCCCCCCceEEE
Q 011178 78 YFPSLA---FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHT--------DLKAILDSGSDLPFPDGLVI 146 (491)
Q Consensus 78 YH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~v 146 (491)
||||.. .|+.+||+|+|+|++++.. +.+|+|++++++||++.... ...... ...++.++|
T Consensus 258 yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~i 328 (447)
T 2dv6_A 258 YHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLI-----NEKPEYFLF 328 (447)
T ss_dssp EECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCCEECCBBHHHHH-----TTCCSEEEE
T ss_pred EEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCcccccccccCChHHhh-----ccCCCEEEE
Confidence 999974 7889999999999986432 24588999999999875321 011111 124688999
Q ss_pred cCcCCCc---ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCC--ccCeEEEcCCceEEEEEEeCCC
Q 011178 147 NGRGSNA---NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQN--TYDSLDIHLGQSYSVLVRADQP 221 (491)
Q Consensus 147 NG~~~~~---~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~--~~~~l~l~pGeR~dv~v~~~~~ 221 (491)
||+.... +.+++++|++|||||+|++....+.|+|+||.|+||+.||.++++. ..+++.|.||||++|+|+++ .
T Consensus 329 NG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~-~ 407 (447)
T 2dv6_A 329 NGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKID-R 407 (447)
T ss_dssp TTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECC-S
T ss_pred CCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECC-C
Confidence 9998421 4799999999999999999888999999999999999999998665 47999999999999999999 5
Q ss_pred CcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 222 PQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 222 ~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
+|.|++.++..... .....++++|.+..
T Consensus 408 pG~~~~hch~~~h~-~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 408 AGRYILVDHALSRL-EHGLVGFLNVDGPK 435 (447)
T ss_dssp CEEEEEEESSGGGG-GGTCCEEEEECSCS
T ss_pred CEEEEEEecCcCcc-ccCCEEEEEEeCCC
Confidence 89999998865432 23457899997654
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=324.31 Aligned_cols=214 Identities=17% Similarity=0.141 Sum_probs=160.5
Q ss_pred cccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCC-----CCC-CCCCCCCCCeEEEEEEeCCCcc---
Q 011178 6 HFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDG-----VYG-TNCPIPPGKNFTYVLQVKDQIG--- 74 (491)
Q Consensus 6 ~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG-----~~~-~q~~i~PG~~~~Y~f~~~~~~G--- 74 (491)
|...+||+||+ ||+|+|+|+|+|++++||||||+++ .++|+|| ++. +||+|+||++|+|+|++++++|
T Consensus 446 ~~g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~-~~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~ 524 (742)
T 2r7e_A 446 ESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITD-VRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTK 524 (742)
T ss_dssp SSCSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSE-ECCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCS
T ss_pred ccCCCCCeEEEECCCEEEEEEEeCCCCCcCEEeccccc-CCcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcc
Confidence 33444555543 3455666999999999999999998 3567765 555 7999999999999999976554
Q ss_pred ------ceeEeCCcc--ccccCCceeEEEEecCCCC-C--CCCCCCCCcceEEeeec------ccCCHHHHHHHHh-cC-
Q 011178 75 ------SYFYFPSLA--FHKAAGGYGGIKIASRPLI-P--VPFDPPAGDFTILAGDW------YKKNHTDLKAILD-SG- 135 (491)
Q Consensus 75 ------t~wYH~H~~--~q~~~Gl~G~liV~~~~~~-~--~~~~~~~~e~~l~l~d~------~~~~~~~~~~~~~-~~- 135 (491)
|||||||.+ .|+++||+|+|||+++... + .+. ..|+|++|++++| +++. .+..+.. ..
T Consensus 525 ~d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~-~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~ 601 (742)
T 2r7e_A 525 SDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQI-MSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAG 601 (742)
T ss_dssp SSCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSS-CCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSC
T ss_pred cCCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcC-CCCceEEEEeecccccccccccc--chhhcccCchh
Confidence 999999987 5789999999999987531 1 112 4589999999754 4321 1211110 00
Q ss_pred CCCC------CCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcC
Q 011178 136 SDLP------FPDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 208 (491)
Q Consensus 136 ~~~~------~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~p 208 (491)
.... ....++|||+.+....+.+++|++|||||+|+|.. ..+.|+|+||.|+|+ +...+++.|.|
T Consensus 602 v~~~~~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~P 673 (742)
T 2r7e_A 602 VQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFP 673 (742)
T ss_dssp SCCCCHHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCC
T ss_pred cccccccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECC
Confidence 0000 01247899997533359999999999999998764 468999999999986 56789999999
Q ss_pred CceEEEEEEeCCCCcceEEEEEee
Q 011178 209 GQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 209 GeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
|||++|+|+++ .+|.|.+.++..
T Consensus 674 g~~~~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 674 FSGETVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp CSSEECCEECC-CCCCSCCEECCC
T ss_pred CcEEEEEEEcC-CCeEEEEEeCCc
Confidence 99999999998 579999988864
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=247.65 Aligned_cols=228 Identities=16% Similarity=0.159 Sum_probs=165.0
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
...+++||+.. .|+|+++.|+++++|+.|.... .+.++++|.. ..+.||.+. .+...|.||++++..++++
T Consensus 54 ~~~~~~ng~~p-gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~- 124 (288)
T 3gdc_A 54 FKGWSYNGRIP-GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDAT- 124 (288)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECC-
T ss_pred EEEEEECCccC-CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcC-
Confidence 35799999864 6999999999999999999865 7889999975 457898754 2446789999999999997
Q ss_pred CCcceEEEEEeecc-CC-CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 221 PPQGYYIVISTRFT-SQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 221 ~~g~~~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
.+|+||...+.... .+ .....+.|.+..... . |..+
T Consensus 125 ~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~-----~---~~~d---------------------------------- 162 (288)
T 3gdc_A 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG-----R---PPAD---------------------------------- 162 (288)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECSSC-----C---CCCS----------------------------------
T ss_pred CCccEEEEecCcchHHHHhCcCeEEEEEeCCcc-----C---CCCc----------------------------------
Confidence 68999998775310 01 112334444432210 0 1001
Q ss_pred cceEEEEeccc-c--CcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 299 TTHTIRLQNTA-P--TINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 299 ~~~~~~l~~~~-~--~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
+++.+.... . .......|.|||+.|... ...++++.|++|+|
T Consensus 163 --~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~~---------------------------------~~~l~v~~Ge~vr~ 207 (288)
T 3gdc_A 163 --DEMVMVMNGYNTDGGDDNEFYSVNGLPFHFM---------------------------------DFPVKVKQHELVRI 207 (288)
T ss_dssp --EEEEEEEEEECCSSTTCCSEEEETTSTTHHH---------------------------------HSCEEEETTCCEEE
T ss_pred --ceEEEEEeeEecCCCCCcceEEECccccccc---------------------------------CcccccCCCCEEEE
Confidence 111110000 0 001134689999876310 01256788999999
Q ss_pred EEEcCCCC--CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh
Q 011178 376 VFENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ 453 (491)
Q Consensus 376 ~i~N~~~~--~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~ 453 (491)
.|.|.+.. .|||||||+.|+|++.+.. +..+.++||+.|+|++.+.|+|++++||.|+||||+++|+
T Consensus 208 ~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~ 276 (288)
T 3gdc_A 208 HLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFA 276 (288)
T ss_dssp EEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHH
T ss_pred EEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHH
Confidence 99999853 5999999999999875421 2335799999999999999999999999999999999999
Q ss_pred hcceEEEEEEec
Q 011178 454 YLGQQFYLRVYS 465 (491)
Q Consensus 454 d~GMm~~~~V~~ 465 (491)
+.|||..|+|.+
T Consensus 277 ~~GM~~~~~V~~ 288 (288)
T 3gdc_A 277 ELGWMGFFEVSA 288 (288)
T ss_dssp TTTCEEEEEEEC
T ss_pred hcCCCEEEEEeC
Confidence 999999999863
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-29 Score=247.49 Aligned_cols=245 Identities=16% Similarity=0.138 Sum_probs=165.1
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEe---cCccCCCCccCeEEEcCCceEEEEEE
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV---EGTHTLQNTYDSLDIHLGQSYSVLVR 217 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~---DG~~~~p~~~~~l~l~pGeR~dv~v~ 217 (491)
...+++||+.. .|+|++++|+++|+|++|.+.. .. +|+.|-+.+.+. ||.+. ++...|.||||+++.++
T Consensus 23 ~~~~~~NG~~p-GP~I~v~~Gd~v~v~v~N~l~~-~~--siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~ 94 (339)
T 2zwn_A 23 YKVFGFNGQVP-GPLIHVQEGDDVIVNVTNNTSL-PH--TIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFK 94 (339)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEEESSS-CB--CCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEE
T ss_pred EEEEEECCccC-CCeEEEECCCEEEEEEEECCCC-Cc--cEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEE
Confidence 35799999953 7999999999999999999864 34 455555666664 99853 35567999999999999
Q ss_pred eCCCCcceEEEEEeeccCC-C-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCcc
Q 011178 218 ADQPPQGYYIVISTRFTSQ-V-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYG 295 (491)
Q Consensus 218 ~~~~~g~~~i~~~~~~~~~-~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 295 (491)
++ .+|+||+.++.....+ . ....+.+....... ..++.....+....+. ++..... ..+...+
T Consensus 95 ~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~~d~e~~l~l~-----d~~~~~~-~~~~~~g----- 159 (339)
T 2zwn_A 95 AD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKRVTKDVIMMMS-----TWESAVA-DKYGEGG----- 159 (339)
T ss_dssp CC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGGCSEEEEEEEE-----EECGGGT-TCTTCCC-----
T ss_pred CC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---ccccccCCceEEEEee-----heecccc-cccCCCC-----
Confidence 98 5899999876532111 1 12233333332211 1111000011100000 0111000 0000000
Q ss_pred ccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 296 LINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 296 ~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
. .......|.|||+.|.. ...+.++.|++++|
T Consensus 160 -----------~---~~~~~~~~~ING~~~~~----------------------------------~~~~~v~~G~~vrl 191 (339)
T 2zwn_A 160 -----------T---PMNVADYFSVNAKSFPL----------------------------------TQPLRVKKGDVVKI 191 (339)
T ss_dssp -----------S---TTSCCCEEEETTBCTTS----------------------------------SCCEEECTTCEEEE
T ss_pred -----------C---CccccceEEEccccCCC----------------------------------cccEEECCCCEEEE
Confidence 0 00112468899976521 12257788999999
Q ss_pred EEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhh---
Q 011178 376 VFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR--- 452 (491)
Q Consensus 376 ~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H--- 452 (491)
+|.|.+...||||||||.|+|++.++. .+.+|.++||+.|+||+.+.|+|++|+||.|+||||++.|
T Consensus 192 rliN~~~~~h~~hlhGh~f~vi~~DG~----------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~ 261 (339)
T 2zwn_A 192 RFFGAGGGIHAMHSHGHDMLVTHKDGL----------PLDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTA 261 (339)
T ss_dssp EEEECSSSCEEEEETTCCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCB
T ss_pred EEEeCCCceEEEEECCcEEEEEEeCCe----------ecCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhccc
Confidence 999998888999999999999998532 2334779999999999999999999999999999999999
Q ss_pred ---hhcceEEEEEEecC
Q 011178 453 ---QYLGQQFYLRVYSS 466 (491)
Q Consensus 453 ---~d~GMm~~~~V~~~ 466 (491)
++.|||+.+++...
T Consensus 262 ~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 262 GGKHPGGPITVIEYDGV 278 (339)
T ss_dssp TTBSSCSSEEEEEETTS
T ss_pred ccccCCCcEEEEEECCC
Confidence 88999999998643
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=243.11 Aligned_cols=246 Identities=17% Similarity=0.152 Sum_probs=167.6
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeE-EEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|+++.|+++++|+.|.... ...++.+|.... ..+.||.+. +....|.||++++..++++
T Consensus 23 ~~~~~ng~~p-GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~- 95 (318)
T 3g5w_A 23 HTFAFNGQVP-APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAE- 95 (318)
T ss_dssp EEEEETTBSS-CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-
T ss_pred EEEEECCccC-CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcC-
Confidence 4789999864 7999999999999999998854 688888887654 236788754 3456789999999999998
Q ss_pred CCcceEEEEEeeccCCC--cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 221 PPQGYYIVISTRFTSQV--LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 221 ~~g~~~i~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
.+|+||..++.....+. ....+.|.+..... .+++.....+....+. +|...... ..... ..
T Consensus 96 ~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~~~d~e~~l~l~-----dw~~~~~~-~~~~~------~~- 159 (318)
T 3g5w_A 96 PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEKTVTKDYILMLS-----DWVSSWAN-KPGEG------GI- 159 (318)
T ss_dssp SCEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHHTCCEEEEEEEE-----EECGGGTT-CTTCC------CC-
T ss_pred CCEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccccccceeEEEEE-----eecccccc-ccccC------CC-
Confidence 57999987765321110 12334444433210 0000000001000000 01000000 00000 00
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
.......|.|||+.|.. ...+.++.|++++|+|.
T Consensus 160 ------------~~~~~d~~~ING~~~~~----------------------------------~~~l~v~~G~~vrlrli 193 (318)
T 3g5w_A 160 ------------PGDVFDYYTINAKSFPE----------------------------------TQPIRVKKGDVIRLRLI 193 (318)
T ss_dssp ------------TTCCCCEEEETTBCBTS----------------------------------SCCEEECTTCEEEEEEE
T ss_pred ------------CCCcCcEEEEcCcCCCC----------------------------------CccEEeCCCCEEEEEEE
Confidence 00112358999987621 11257789999999999
Q ss_pred cCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhh----
Q 011178 379 NPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQY---- 454 (491)
Q Consensus 379 N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d---- 454 (491)
|.+...||||||||.|+|+++.++ .+.+|.++||+.|.|++.+.|+|+|+|||.|+||||+++|++
T Consensus 194 N~~~~~h~~hlhGh~f~vi~~dG~----------~~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~ 263 (318)
T 3g5w_A 194 GAGDHVHAIHTHGHISQIAFKDGF----------PLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263 (318)
T ss_dssp ECSSSCEEEEETTSCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTB
T ss_pred eCCCceEEEEECCcEEEEEecCCc----------ccCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCc
Confidence 998888999999999999998532 233577999999999999999999999999999999999998
Q ss_pred --cceEEEEEEecC
Q 011178 455 --LGQQFYLRVYSS 466 (491)
Q Consensus 455 --~GMm~~~~V~~~ 466 (491)
.|||..++|...
T Consensus 264 ~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 264 PDGGIMTTIEYEEV 277 (318)
T ss_dssp SSCBSEEEEEETTT
T ss_pred CCCCCEEEEEECCC
Confidence 589999998653
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-25 Score=217.48 Aligned_cols=232 Identities=13% Similarity=0.068 Sum_probs=137.7
Q ss_pred EEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC----CccCeEEEcCCceEEEEEEeC
Q 011178 144 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ----NTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 144 ~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p----~~~~~l~l~pGeR~dv~v~~~ 219 (491)
.++||.. .|+|++++|+++|+|+.|... ..+.++.+|..+. .+.||.+... .......|.||||++..++++
T Consensus 52 ~~~n~~p--GP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 52 SRTSGLL--GPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CSSCCSC--CCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred cccCCcc--CCEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 4589877 899999999999999999874 5778888887642 2578876521 223357799999999999997
Q ss_pred CCC---------cceEEEEEeeccC---CCcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCC
Q 011178 220 QPP---------QGYYIVISTRFTS---QVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPN 287 (491)
Q Consensus 220 ~~~---------g~~~i~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~ 287 (491)
+.. |+||...+..... ..+.+ ++|...... ....+.+ + ..+..+ ...+..
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~-~~~~~~~--~--~~d~e~------~l~~~d------ 189 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGT-LTEDGTQ--K--MFEKQH------VLMFAV------ 189 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE-EEEEECTTC-BCTTSSB--S--SSCCCC------CCBCCE------
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCceE-EEEEccCCC-CCccCCc--C--cccceE------EEEEEe------
Confidence 643 6999988743211 11222 233332211 0000000 0 001000 000000
Q ss_pred CCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEee
Q 011178 288 PQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAA 367 (491)
Q Consensus 288 p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 367 (491)
+.-..+. .......|.|||+.|.. .| .+.+
T Consensus 190 ---------------~d~~~~~-~~~~~~~~~ING~~~~~--~p--------------------------------~l~v 219 (306)
T 1sdd_A 190 ---------------FDESKSW-NQTSSLMYTVNGYVNGT--MP--------------------------------DITV 219 (306)
T ss_dssp ---------------EETTSSS-SCCCCEEECSSSCCSSC--CC--------------------------------CCCC
T ss_pred ---------------ccccccc-ccCCCcceeeCCEecCC--Cc--------------------------------ceEE
Confidence 0000000 00113458888887621 11 1456
Q ss_pred cCCcEEEEEEEcCCCC--CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeee
Q 011178 368 DFRGFAEVVFENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNI 445 (491)
Q Consensus 368 ~~g~~v~~~i~N~~~~--~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~ 445 (491)
+.|++++|+|.|.+.. .||||||||.|++ +| .++||+.|.||+.+.|+|++++||.|+|
T Consensus 220 ~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~ 280 (306)
T 1sdd_A 220 CAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTI 280 (306)
T ss_dssp CCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCC
T ss_pred cCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEE
Confidence 7899999999999864 6999999999986 22 2589999999999999999999999999
Q ss_pred eecchhhhhcceEEEEEEecC
Q 011178 446 RSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 446 HCHil~H~d~GMm~~~~V~~~ 466 (491)
|||+++|++.|||+.|+|.+.
T Consensus 281 hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 281 ASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp BCCSTTTGGGTCBCCC-----
T ss_pred EeCChHHHhcCCeEEEEEecC
Confidence 999999999999999998753
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-22 Score=213.39 Aligned_cols=242 Identities=12% Similarity=0.128 Sum_probs=145.9
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC----CccCeEEEcCCceEEEEEEeCCC-----Cc
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ----NTYDSLDIHLGQSYSVLVRADQP-----PQ 223 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p----~~~~~l~l~pGeR~dv~v~~~~~-----~g 223 (491)
.|+|++++|+++++|+.|.... ...+|.||.... .+.||.+... ..+....|.|||+++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 6999999999999999999864 678888887654 5789976421 12335679999999999999874 47
Q ss_pred ----ceEEEEEeeccCCC-cceEEEEEecCCCCC-CCCCCCCCCCccccchhhhh-hhhccCCCCCCCCCCCCCCCCccc
Q 011178 224 ----GYYIVISTRFTSQV-LSATSVLHYSNSAGS-VSGPPPGGPTTQIDWSLEQA-RSLRRNLTASGPRPNPQGSYHYGL 296 (491)
Q Consensus 224 ----~~~i~~~~~~~~~~-~~~~ail~y~~~~~~-~~~~~p~~p~~~~~~~~~~~-~~~~~~l~~~~~~~~p~~~~~~~~ 296 (491)
+||...+.....+. ....+.|........ .....|. ...+....+... ....+.+.. ...
T Consensus 146 ~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~-~~~e~~l~l~~~d~~~~w~~~~-----~~~------- 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPV-DMREFVLLFMVFDEKKSWYYDK-----KPT------- 212 (647)
T ss_dssp CSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCS-SCCEEEEEEEEEEGGGSSCCC----------------
T ss_pred CCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCC-cceeEEEEEEeecCcccccccc-----Ccc-------
Confidence 99998776321111 112332222222111 1000111 001111111000 000111100 000
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
..+.... .........+.|||+.|. .| .+.++.|++++|+
T Consensus 213 ----~~~~~~~-~~~~~~~~~~~iNG~~~~---~p--------------------------------~l~v~~G~~vrlr 252 (647)
T 1sdd_B 213 ----RSWRRAS-SEVKNSHEFHAINGMIYN---LP--------------------------------GLRMYEQEWVRLH 252 (647)
T ss_dssp ----------------CCCEEEEETTBSSC---CC--------------------------------CCEEETTCEEEEE
T ss_pred ----cccccCC-cchhhcCceeccCCEecC---CC--------------------------------CeEEcCCCEEEEE
Confidence 0000000 000012356888988761 11 1467889999999
Q ss_pred EEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhh
Q 011178 377 FENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQY 454 (491)
Q Consensus 377 i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d 454 (491)
|.|.+. +.||||+|||.|+|++.+ +.++||+.|.|++.+.|+|++++||.|+||||+++|++
T Consensus 253 liN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~ 316 (647)
T 1sdd_B 253 LLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQR 316 (647)
T ss_dssp EEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHT
T ss_pred EEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCcccccc
Confidence 999875 379999999999998652 34799999999999999999999999999999999999
Q ss_pred cceEEEEEEec
Q 011178 455 LGQQFYLRVYS 465 (491)
Q Consensus 455 ~GMm~~~~V~~ 465 (491)
.|||+.|.|.+
T Consensus 317 ~Gm~~~~~V~~ 327 (647)
T 1sdd_B 317 AGMQTPFLIVD 327 (647)
T ss_dssp TTCEEEEEEEC
T ss_pred cccccceeeec
Confidence 99999999964
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-21 Score=192.11 Aligned_cols=258 Identities=12% Similarity=0.119 Sum_probs=155.9
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
...+++||+.. .|+|++++|+++|+|++|... ...+.+++++... +.||..+ . .|.|||++++.++++
T Consensus 59 ~~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~PG~~~~y~~~~~ 127 (340)
T 2bw4_A 59 IHAMTFNGSVP-GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVNPGEETTLRFKAT 127 (340)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCTTEEEEEEEECC
T ss_pred EEEEEECCCCC-CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeCCCCEEEEEEECC
Confidence 35789999853 699999999999999999973 2456667766542 2233222 1 399999999999998
Q ss_pred CCCcceEEEEEeecc--CCC-cceEEEEEecCCCC-CCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCC-c
Q 011178 220 QPPQGYYIVISTRFT--SQV-LSATSVLHYSNSAG-SVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYH-Y 294 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~--~~~-~~~~ail~y~~~~~-~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~ 294 (491)
+ +|+||..++.... .+. ....+.+....... ....+.|.. .+.+..+. ..++.+.. .+.+.+. +
T Consensus 128 ~-~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~--~d~e~~l~---l~D~~~~~-----~~~g~~~~~ 196 (340)
T 2bw4_A 128 K-PGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLT--YDKIYYVG---EQDFYVPK-----DEAGNYKKY 196 (340)
T ss_dssp S-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEEC--CSEEEEEE---EEEECCCB-----CTTSCBCCC
T ss_pred C-CeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcC--cceeEEEe---eeeeeecc-----ccCCccccc
Confidence 5 8999998875310 111 12233333322211 000001100 11110000 00111100 0000000 0
Q ss_pred ccc--ccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcE
Q 011178 295 GLI--NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372 (491)
Q Consensus 295 ~~~--~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 372 (491)
... ..... +... .......|.|||+.|.... ...+.++.|++
T Consensus 197 ~~~~~~~~~~--~~~~--~~~~~~~~~iNG~~~~~~~--------------------------------~~~l~v~~G~r 240 (340)
T 2bw4_A 197 ETPGEAYEDA--VKAM--RTLTPTHIVFNGAVGALTG--------------------------------DHALTAAVGER 240 (340)
T ss_dssp CSHHHHHHHH--HHHH--HTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCE
T ss_pred ccccccccch--hhHh--hcCCCCEEEECCccCCccC--------------------------------CCceEcCCCCE
Confidence 000 00000 0000 0011246889998762110 12367888999
Q ss_pred EEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCC-CceeeEEeCCCCEEEEEEEccCcceeeeeecch-
Q 011178 373 AEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT-ISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENW- 450 (491)
Q Consensus 373 v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p-~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil- 450 (491)
++|++.|.+...|++|+|||.|+|++ +|.+. ..| .++||+.|.+|+.+.|.|++++||.|+||||++
T Consensus 241 ~Rl~n~~~~~~~~~~~i~gh~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~ 309 (340)
T 2bw4_A 241 VLVVHSQANRDTRPHLIGGHGDYVWA--TGKFR---------NPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLI 309 (340)
T ss_dssp EEEEEEESSSCBCEEEETCCEEEEET--TCCTT---------SCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred EEEEECCCCCccceEEecCcceEEeC--CCccc---------CCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchH
Confidence 99988888777899999999999986 33221 112 257999999999999999999999999999999
Q ss_pred hhhhcceEEEEEEecCC
Q 011178 451 ARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 451 ~H~d~GMm~~~~V~~~~ 467 (491)
+|++.|||+.|+|....
T Consensus 310 ~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 310 EAFELGAAGHFKVTGEW 326 (340)
T ss_dssp HHHTTSCEEEEEEESCC
T ss_pred HHHhCCCEEEEEECCCC
Confidence 69999999999997543
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=187.30 Aligned_cols=245 Identities=14% Similarity=0.089 Sum_probs=161.0
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|++++|+++++|++|.... ..+.++++|.. +.||... ...|.|||++++.+++++
T Consensus 59 ~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~~ 127 (327)
T 1kbv_A 59 RYWTFDGDVP-GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKALQ 127 (327)
T ss_dssp EEEEETTBSS-CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECCS
T ss_pred EEEEECCccC-CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECCC
Confidence 4789999853 7999999999999999999753 56788888753 5788642 124899999999999985
Q ss_pred CCcceEEEEEeec-cCC-CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 221 PPQGYYIVISTRF-TSQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 221 ~~g~~~i~~~~~~-~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
+|+||..++... ..+ .....+.+.+.... .+|. .+.+..+- .-++....... . .+.
T Consensus 128 -~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~-----~~p~---~d~e~~l~---~~d~~~~~~~~--~-~g~------- 185 (327)
T 1kbv_A 128 -PGLYIYHCAVAPVGMHIANGMYGLILVEPKE-----GLPK---VDKEFYIV---QGDFYTKGKKG--A-QGL------- 185 (327)
T ss_dssp -CEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC---CSEEEEEE---EEEECBSSCTT--C-CEE-------
T ss_pred -CeEEEEEeCCCChhhhhhcceEEEEEEecCC-----CCCC---CceEEEEE---eeeeeccCccc--c-ccc-------
Confidence 799999876421 011 01223333333321 1221 11110000 00111111000 0 000
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
..+.+.... ......+.|||+.+... ....++++.|++++|+|.
T Consensus 186 --~~~~~~~~~--~~~~~~~~iNG~~~~~~--------------------------------~~~~l~v~~G~~vRlRli 229 (327)
T 1kbv_A 186 --QPFDMDKAV--AEQPEYVVFNGHVGALT--------------------------------GDNALKAKAGETVRMYVG 229 (327)
T ss_dssp --ECBCHHHHH--HTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTEEEEEEEE
T ss_pred --cccChhHhc--cCCCceEEEcCcccCCC--------------------------------CceeEEeCCCCEEEEEEE
Confidence 000000000 01123578888765210 012367889999999999
Q ss_pred cCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh-hcc
Q 011178 379 NPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ-YLG 456 (491)
Q Consensus 379 N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~-d~G 456 (491)
|.+. ..|+||||||.|+|++..++. ..|.++||+.|.||+.+.|.|++++||.|++|||++.|. ..|
T Consensus 230 N~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g 298 (327)
T 1kbv_A 230 NGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKG 298 (327)
T ss_dssp EEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSS
T ss_pred CCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCC
Confidence 9874 579999999999999996542 125689999999999999999999999999999999995 889
Q ss_pred eEEEEEEecC
Q 011178 457 QQFYLRVYSS 466 (491)
Q Consensus 457 Mm~~~~V~~~ 466 (491)
|++.++|...
T Consensus 299 ~~a~l~~~g~ 308 (327)
T 1kbv_A 299 ALGQLKVEGA 308 (327)
T ss_dssp CEEEEEEESC
T ss_pred cEEEEEECCC
Confidence 9999999643
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-22 Score=218.55 Aligned_cols=240 Identities=10% Similarity=0.069 Sum_probs=149.5
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC---------CCc
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ---------PPQ 223 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~---------~~g 223 (491)
.|+|+++.|+++++++.|... ..+.+|.+|..+..-.-||.+- ....|.||++++..+++.+ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 699999999999999999975 4778888887654433357642 2346899999999999875 468
Q ss_pred ceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhc----cCCCCC--CCCCCCCCCCCccc
Q 011178 224 GYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLR----RNLTAS--GPRPNPQGSYHYGL 296 (491)
Q Consensus 224 ~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~----~~l~~~--~~~~~p~~~~~~~~ 296 (491)
+||...+.....+. ....|.|.+........... .+..+.+..+-. ..+. +.+... .....|.. ..
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~--~~~~d~E~vl~~-~~~de~~swy~~~~~~~~~~~p~~-~~--- 344 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHG--RQVTVQEFALFF-TIFDETKSWYFTENMERNCRAPCN-IQ--- 344 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSC--CCCSSEEEECCC-CEECCSSSSCTTGGGSSCSCCSSC-CC---
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccC--CCccceEEEEEE-eecCccccchhccchhhcccCccc-cc---
Confidence 89887665321111 12233333333221100000 010111100000 0000 000000 00000000 00
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
..+.. + ......|.|||+.|.. ...+.++.|++++|+
T Consensus 345 -~~d~~--~------~~~~~~~~ING~~~~~----------------------------------~~~l~v~~Ge~vr~r 381 (770)
T 2r7e_B 345 -MEDPT--F------KENYRFHAINGYIMDT----------------------------------LPGLVMAQDQRIRWY 381 (770)
T ss_dssp -SSSSS--S------TTTSCEECTTSCTTTT----------------------------------CCCCCCCSSSCEEEE
T ss_pred -cCCcc--c------cccCCccccCCccCCC----------------------------------CCCeEEeCCCEEEEE
Confidence 00000 0 0112346777765420 112467889999999
Q ss_pred EEcCCCC--CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhh
Q 011178 377 FENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQY 454 (491)
Q Consensus 377 i~N~~~~--~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~d 454 (491)
|.|.+.. .||||||||.|+|++.+ | .++||+.|.|++++.|+|++|+||.|+||||+++|++
T Consensus 382 liN~g~~~~~H~fHlhGh~f~Vv~~d-g---------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~ 445 (770)
T 2r7e_B 382 LLSMGSNENIHSIHFSGHVFTVRKKE-E---------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLH 445 (770)
T ss_dssp CCCCCSSSCCCEEEBSSCCEECCSSS-C---------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHT
T ss_pred EEeCCCCcceEEEEEcCCEEEEEecC-C---------------ceeeEEEECCCeEEEEEEEeCCCCceEEEeccccccc
Confidence 9998753 79999999999998774 2 2899999999999999999999999999999999999
Q ss_pred cceEEEEEEe
Q 011178 455 LGQQFYLRVY 464 (491)
Q Consensus 455 ~GMm~~~~V~ 464 (491)
.|||..|.|.
T Consensus 446 ~GM~~~~~V~ 455 (770)
T 2r7e_B 446 AGMSTLFLVY 455 (770)
T ss_dssp TBCCCCCCBC
T ss_pred cccccccccc
Confidence 9999999984
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-19 Score=178.86 Aligned_cols=260 Identities=10% Similarity=0.052 Sum_probs=149.2
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC-CeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS-TSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~-~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
...+++||+.. .|+|++++|+++++|+.|.+.. ..+-+++++.. ..||.. + .. .|.||+++++.++++
T Consensus 52 ~~~~~~ng~~p-gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~--~~--~i~PG~~~~y~f~~~ 120 (333)
T 1mzy_A 52 LQAMTFDGSIP-GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--G--LT--LINPGEKVVLRFKAT 120 (333)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--G--GC--CBCTTEEEEEEEECC
T ss_pred EEEEEECCccC-CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--c--ee--EeCCCCEEEEEEECC
Confidence 35789999863 7999999999999999999642 23344444321 122221 1 12 399999999999998
Q ss_pred CCCcceEEEEEeec---cCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCC-c
Q 011178 220 QPPQGYYIVISTRF---TSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYH-Y 294 (491)
Q Consensus 220 ~~~g~~~i~~~~~~---~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~ 294 (491)
.+|+||..++... ..+. ....+.+....... ...+.+.....+.+..+. .-+|.+... ..+.+. +
T Consensus 121 -~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~-~~~~~~~p~~~d~e~~l~---l~D~~~~~~-----~~g~~~~~ 190 (333)
T 1mzy_A 121 -RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDG-LKDHEGKPVRYDTVYYIG---ESDHYIPKD-----EDGTYMRF 190 (333)
T ss_dssp -SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTC-CBCTTSCBCCCSEEEEEE---EEEECCCBC-----TTSCBCCC
T ss_pred -CCEEEEEeecCCcccchhhhhCCCEEEEEEccCcC-ccccccCCCccchheeee---eeeeccCcc-----cccccccc
Confidence 4899999887531 0111 12334333332211 000010000011111000 001111000 000000 0
Q ss_pred cccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEE
Q 011178 295 GLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAE 374 (491)
Q Consensus 295 ~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 374 (491)
........-.+... .......|.|||+.+..+ +...+.++.|++++
T Consensus 191 ~~~~~~~~~~~~~~--~~~~~~~~~ING~~~~~~--------------------------------~~~~l~v~~Ger~R 236 (333)
T 1mzy_A 191 SDPSEGYEDMVAVM--DTLIPSHIVFNGAVGALT--------------------------------GEGALKAKVGDNVL 236 (333)
T ss_dssp SSHHHHHHHHHHHH--TTTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEE
T ss_pred ccccccccchhHHh--hccCCcEEEECCcccccC--------------------------------CCcceEecCCCEEE
Confidence 00000000000000 001124688998764210 01226788899999
Q ss_pred EEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCC-ceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh
Q 011178 375 VVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTI-SRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ 453 (491)
Q Consensus 375 ~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~-~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~ 453 (491)
|++.|.+...+++++|+|.|.|++ +|.+. ..|. ++||+.|.||+.+.|.|.+++||.|+||||+++|+
T Consensus 237 l~n~~~~~~~~~h~i~~h~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~h~ 305 (333)
T 1mzy_A 237 FVHSQPNRDSRPHLIGGHGDLVWE--TGKFH---------NAPERDLETWFIRGGTAGAALYKFLQPGVYAYVNHNLIEA 305 (333)
T ss_dssp EEEEESSSCBCEEEETCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHH
T ss_pred EEECCCCCccccEEECCCCeEEEe--CCccc---------CCCccCcceEEECCCceEEEEEEcCCCEEEEEecChhhhH
Confidence 888777655556667888898887 34321 1122 68999999999999999999999999999999997
Q ss_pred -hcceEEEEEEecC
Q 011178 454 -YLGQQFYLRVYSS 466 (491)
Q Consensus 454 -d~GMm~~~~V~~~ 466 (491)
+.|||+.|+|...
T Consensus 306 ~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 306 VHKGATAHVLVEGE 319 (333)
T ss_dssp HTTCCEEEEEEESC
T ss_pred hhCCCEEEEEEcCC
Confidence 9999999999754
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-18 Score=176.84 Aligned_cols=246 Identities=12% Similarity=0.042 Sum_probs=162.0
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|+++.|+++++|+.|... ...+.+|++|+. ..||... ...|.||+++++.++++
T Consensus 49 ~~~~~ng~~p-gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~- 116 (442)
T 2zoo_A 49 VFWSFGETVP-GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKAL- 116 (442)
T ss_dssp EEEEETTBSS-CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECC-
T ss_pred EEEEECCcCC-CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcC-
Confidence 4789999863 799999999999999999964 357889999865 3677532 23589999999999998
Q ss_pred CCcceEEEEEeec-cCC-CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCCCccccc
Q 011178 221 PPQGYYIVISTRF-TSQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLIN 298 (491)
Q Consensus 221 ~~g~~~i~~~~~~-~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 298 (491)
.+|+||+..+... ..+ .....+.|.+.... .+|. ...+....+. ++.+...... +
T Consensus 117 ~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~-~d~e~~l~l~-----d~~~~~~~~~--~---------- 173 (442)
T 2zoo_A 117 NPGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP-VDREYYLVQG-----DFYTKGEFGE--A---------- 173 (442)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC-CSEEEEEEEE-----EECBSSCTTC--C----------
T ss_pred CCeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC-CCceEEEEee-----eeeccCcccc--c----------
Confidence 5899999875311 011 11234445554322 1111 0011110110 1111110000 0
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
....+.+.... ......+.|||+.+... ....+.++.|++++|+|.
T Consensus 174 ~~~~~~~~~~~--~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~G~~vrlrli 219 (442)
T 2zoo_A 174 GLQPFDMAKAI--DEDADYVVFNGSVGSTT--------------------------------DENSLTAKVGETVRLYIG 219 (442)
T ss_dssp EEECBCHHHHH--TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEEEEE
T ss_pred ccccCChhHhc--cCCCCEEEECCCcCCCC--------------------------------CCCceEeCCCCEEEEEEE
Confidence 00000000000 01123577888764210 002357788999999999
Q ss_pred cCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhh-hhcc
Q 011178 379 NPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWAR-QYLG 456 (491)
Q Consensus 379 N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H-~d~G 456 (491)
|.+. ..|+||+||+.|.|++..++. ..|.+.|++.|.||+.+.|.|+++.||.|++|||.+.| .+.|
T Consensus 220 N~~~~~~~~~~i~g~~~~vi~~DG~~-----------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g 288 (442)
T 2zoo_A 220 NGGPNLVSSFHVIGEIFDTVYVEGGS-----------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKG 288 (442)
T ss_dssp EEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTS
T ss_pred eCCCCCceeeEEcCCEEEEEecCCcc-----------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccC
Confidence 9764 579999999999999986431 12568899999999999999999999999999999999 5999
Q ss_pred eEEEEEEecCC
Q 011178 457 QQFYLRVYSSA 467 (491)
Q Consensus 457 Mm~~~~V~~~~ 467 (491)
||+.++|...+
T Consensus 289 ~~a~l~v~~~~ 299 (442)
T 2zoo_A 289 ALAMLKVEGPD 299 (442)
T ss_dssp CEEEEEEESCC
T ss_pred ceEEEEecCCC
Confidence 99999997544
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=3.1e-17 Score=163.99 Aligned_cols=258 Identities=14% Similarity=0.174 Sum_probs=152.8
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCC-CCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGI-STSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ 220 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~-~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~ 220 (491)
..+++||+.. .|+|++++|+++++|+.|... ...+.++++++.. .||.. + +. .|.||++++..+++++
T Consensus 54 ~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~--~~--~i~pG~~~~y~f~~~~ 122 (336)
T 1oe1_A 54 QAMTFNGSMP-GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--K--LT--NVNPGEQATLRFKADR 122 (336)
T ss_dssp EEEEETTBSS-CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--G--GC--CBCTTEEEEEEEECCS
T ss_pred EEEEECCccC-CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--c--eE--EeCCCCEEEEEEECCC
Confidence 5789999853 799999999999999999874 2567788888652 23331 1 11 3899999999999985
Q ss_pred CCcceEEEEEeecc--CC-CcceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhccCCCCCCCCCCCCCCC-Cccc
Q 011178 221 PPQGYYIVISTRFT--SQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSY-HYGL 296 (491)
Q Consensus 221 ~~g~~~i~~~~~~~--~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~-~~~~ 296 (491)
+|+||...+.... .+ .....+.|.+..... ...+.+.....+.+..+. .-+|.+... ..+.+ .+..
T Consensus 123 -~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~-~~~~~~~~~~~D~e~~l~---~~D~~~~~~-----~~g~~~~~~~ 192 (336)
T 1oe1_A 123 -SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG-LKDPQGKPLHYDRAYTIG---EFDLYIPKG-----PDGKYKDYAT 192 (336)
T ss_dssp -CEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC-CBCTTSCBCCCSEEEEEE---EEEECCCBC-----TTSSBCCCSS
T ss_pred -CeEEEEecCCCCchhHHHhCCCeEEEEEecCcC-CcccccCcccCCceeEee---eeeeeeccc-----cCCceeeccc
Confidence 8999998875310 01 112334333332211 001111100011110000 001111000 00000 0000
Q ss_pred c-ccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEE
Q 011178 297 I-NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 375 (491)
Q Consensus 297 ~-~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 375 (491)
. ..... .+.... ......+.|||+.+... +...+.++.|++++|
T Consensus 193 ~~~~~~~-~~~~~~--~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~GervRl 237 (336)
T 1oe1_A 193 LAESYGD-TVQVMR--TLTPSHIVFNGKVGALT--------------------------------GANALTAKVGETVLL 237 (336)
T ss_dssp TGGGHHH-HHHHHH--TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEE
T ss_pred ccccccc-hhhHhh--cCCCCEEEECCeeccCC--------------------------------CCcceEcCCCCEEEE
Confidence 0 00000 000000 00123577887754210 012367889999998
Q ss_pred EEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCC-CceeeEEeCCCCEEEEEEEccCcceeeeeecchhhh-
Q 011178 376 VFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT-ISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQ- 453 (491)
Q Consensus 376 ~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p-~~rDTv~v~p~~~~~irf~adnpG~w~~HCHil~H~- 453 (491)
+..+.....+++++|||.|.|++ +|.+- ..| .+.||+.|++|+.+.+.|.+++||.|+||||.+.|.
T Consensus 238 in~~~~~~~~~~~i~gh~~~Vi~--DG~~~---------~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~ 306 (336)
T 1oe1_A 238 IHSQANRDTRPHLIGGHGDWVWE--TGKFA---------NPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAF 306 (336)
T ss_dssp EEEESSSCBCEEETTCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHH
T ss_pred EecCCCCccceEEECCcCceEeC--CCcCc---------CCccccceEEEECCCCcEEEEEEcCCCceEEEEechhhccc
Confidence 76666655677778999999986 34321 112 257999999999999999999999999999999986
Q ss_pred hcceEEEEEEecC
Q 011178 454 YLGQQFYLRVYSS 466 (491)
Q Consensus 454 d~GMm~~~~V~~~ 466 (491)
+.||++.|+|...
T Consensus 307 ~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 307 ELGAAGHIKVEGK 319 (336)
T ss_dssp TTSCEEEEEEESC
T ss_pred cCCCeEEEEECCC
Confidence 9999999999754
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.49 E-value=7e-15 Score=121.06 Aligned_cols=87 Identities=17% Similarity=0.214 Sum_probs=65.2
Q ss_pred cCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCC--CCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 8 SSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRN--SWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 8 ~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~--~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
...+++|+|. |+| +++|..+.++++||||..++.. ..+||...+++.|.||++++|+|++++++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V--~~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~-- 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTV--KWVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA-- 90 (105)
T ss_dssp CEESSEEEECTTEEE--EEEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--
T ss_pred EEeCCEEEEcCCCEE--EEEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--
Confidence 3456777764 555 4679988999999999875321 0123332345779999999999998558999999999
Q ss_pred ccccCCceeEEEEec
Q 011178 84 FHKAAGGYGGIKIAS 98 (491)
Q Consensus 84 ~q~~~Gl~G~liV~~ 98 (491)
.+...||.|.|+|++
T Consensus 91 ~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHRGAGMVGKITVEG 105 (105)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred CchhcCCEEEEEEcC
Confidence 456789999999974
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-11 Score=107.35 Aligned_cols=93 Identities=13% Similarity=0.058 Sum_probs=72.1
Q ss_pred EEeecCCcEEEEEEEcCCCC-CCceeccCCCeEEEe------eccC---CCCCCCCCCcccCCCCceeeEEeCCCCEEEE
Q 011178 364 VMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVG------MDGG---EWTPASRLTYNLRDTISRCTVQVYPKSWTAV 433 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~i 433 (491)
.++++.|++|+|+|.|.+.+ .|.||+|+..+.+.. ...+ .+.+. -....++||..|.|++...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCCCEEEE
Confidence 36789999999999999888 899999986532110 0001 11111 01235789999999999999
Q ss_pred EEEccCcceeeeeecchhhhhcceEEEEEE
Q 011178 434 YVPLDNVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 434 rf~adnpG~w~~HCHil~H~d~GMm~~~~V 463 (491)
.|.+++||.|.||||+..|.. ||+..+.|
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 999999999999999999999 99999987
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.4e-11 Score=119.33 Aligned_cols=90 Identities=14% Similarity=0.192 Sum_probs=71.4
Q ss_pred CCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCC--------C-CCCCCCCCCeEEEEEEeCC--Cccce
Q 011178 10 LGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVY--------G-TNCPIPPGKNFTYVLQVKD--QIGSY 76 (491)
Q Consensus 10 ~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~--------~-~q~~i~PG~~~~Y~f~~~~--~~Gt~ 76 (491)
.++.|++ |++|+|+|.|.....+++||||...... .+|.. . ..+.|.||++++|.|++.+ .+|+|
T Consensus 166 ~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 166 TGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp CCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred CCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 4555554 4788999999999999999999754322 24421 1 3356999999999999952 69999
Q ss_pred eEeCCccccccCCceeEEEEecCCC
Q 011178 77 FYFPSLAFHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 77 wYH~H~~~q~~~Gl~G~liV~~~~~ 101 (491)
|||||...+...||.|.|+|++++.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEECCCchHhhCCCeEEEEEeCCCC
Confidence 9999999999999999999998764
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.22 E-value=2e-11 Score=107.12 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=63.3
Q ss_pred CCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCC------CCC--CCCCCCCC--eEEEEEEeCCCcccee
Q 011178 10 LGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGV------YGT--NCPIPPGK--NFTYVLQVKDQIGSYF 77 (491)
Q Consensus 10 ~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~------~~~--q~~i~PG~--~~~Y~f~~~~~~Gt~w 77 (491)
.+++|+| ||+|+++++|... ...|.+.+...+.++.+.. ..+ ...|.||+ +++|+|++ ++||||
T Consensus 59 ~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~--~pGtY~ 134 (154)
T 2cal_A 59 KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP--TAGTYY 134 (154)
T ss_dssp ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC--CSEEEE
T ss_pred CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE--CCceEE
Confidence 4588877 4889999999732 4577777775555443211 110 12689999 99999997 799999
Q ss_pred EeCCccccccCCceeEEEEe
Q 011178 78 YFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~ 97 (491)
||||...|...||+|.|+|+
T Consensus 135 y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 135 YVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECCSTTTGGGTCEEEEEEC
T ss_pred EECCCCCHHHCCCEEEEEEC
Confidence 99998888999999999985
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.22 E-value=4.4e-10 Score=116.00 Aligned_cols=191 Identities=13% Similarity=0.138 Sum_probs=130.7
Q ss_pred eEEEEEEecCCC-CCeeeecccCCCCCCCCCCCCC------CCCCCCCCCeEEEEEEeCCCccceeEeCCcccc--cc-C
Q 011178 19 YTHLVVLNFIYM-APLITLNGVQQRRNSWQDGVYG------TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFH--KA-A 88 (491)
Q Consensus 19 ~v~i~~~N~l~~-~~siH~HG~~~~~~~~~DG~~~------~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q--~~-~ 88 (491)
++++|+.|.... ...+|++|..... -..||.+. ....|.||++++..+++. ++|.||++|+.... .. .
T Consensus 196 ~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~ 273 (439)
T 2xu9_A 196 TLRLRLLNASNARYYRLALQDHPLYL-IAADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMM 273 (439)
T ss_dssp EEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEE
T ss_pred eEEEEEEecCCCceEEEEECCceEEE-EecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCcccc
Confidence 668889999764 5689999975432 23688752 235599999999999995 69999999984311 10 1
Q ss_pred Cc--------------eeEEE--EecCCCCCCCCCCC---CCc-------ceEEeeecccCCHHHHHHHHhcCCCCCCCc
Q 011178 89 GG--------------YGGIK--IASRPLIPVPFDPP---AGD-------FTILAGDWYKKNHTDLKAILDSGSDLPFPD 142 (491)
Q Consensus 89 Gl--------------~G~li--V~~~~~~~~~~~~~---~~e-------~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~ 142 (491)
|| ....+ +.+.. .+.+.+.. ..+ ..+.|.- . + .+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~l~~~~~l~~~~~~r~~~l~~-----~------~-------~g~ 334 (439)
T 2xu9_A 274 DMGGMAHAMPQGPSRPETLLYLIAPKNP-KPLPLPKALSPFPTLPAPVVTRRLVLTE-----D------M-------MAA 334 (439)
T ss_dssp CSSSCCEEEECCSCCCEEEEEEEECSSC-CCCCCCSCCCCCCCCCCCSEEEEEEEEE-----E------G-------GGT
T ss_pred ccccccccccCCCCCcceeEEEEecCCC-ccccCcccCCCcccCCCCCcceEEEEEe-----e------c-------cCc
Confidence 22 11222 22211 11111100 000 0111110 0 0 113
Q ss_pred eEEEcCcCCCc--ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeC
Q 011178 143 GLVINGRGSNA--NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 143 ~~~vNG~~~~~--~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
.++|||+.+.. +.+.++.|++++|+|.|.+. ..+.||++||.|+|++.+|... .|...|++.+.||+++.|.++++
T Consensus 335 ~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad 413 (439)
T 2xu9_A 335 RFFINGQVFDHRRVDLKGQAQTVEVWEVENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR 413 (439)
T ss_dssp EEEETTBCCCTTCCCEEECTTCEEEEEEEECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC
T ss_pred eEeECCEECCCCCCceecCCCCEEEEEEEcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC
Confidence 68899998632 45899999999999999975 4899999999999999999865 57788999999999999999987
Q ss_pred CCCcceEEEEEee
Q 011178 220 QPPQGYYIVISTR 232 (491)
Q Consensus 220 ~~~g~~~i~~~~~ 232 (491)
.+|.|.+.++..
T Consensus 414 -npG~w~~HCHil 425 (439)
T 2xu9_A 414 -EKGRTVFHCHIV 425 (439)
T ss_dssp -SCEEEEEEESSH
T ss_pred -CCCCEEEECCcc
Confidence 789888887754
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.21 E-value=5e-11 Score=97.71 Aligned_cols=85 Identities=11% Similarity=0.019 Sum_probs=66.5
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc-cCcc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVG 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a-dnpG 441 (491)
..+.++.|++|+| .|.+...|+||+||..|... .|.. .+....++..+.||+...++|.+ +.||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~----------~~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKEL----------ADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHH----------HHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---cccc----------cccccccccccCCCCeEEEEEecCCCCe
Confidence 3478899999876 47777889999999876431 0100 00012588999999999999998 7999
Q ss_pred eeeeeecchhhhhcceEEEEEEe
Q 011178 442 MWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|.|||| .|...||+..+.|.
T Consensus 84 ~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--CchhcCCEEEEEEc
Confidence 9999999 69999999999885
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2.3e-10 Score=118.46 Aligned_cols=196 Identities=15% Similarity=0.104 Sum_probs=119.9
Q ss_pred eEEEEEEecCCC-CCeeee-cccCCCCCCCCCCCC----C--CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCc
Q 011178 19 YTHLVVLNFIYM-APLITL-NGVQQRRNSWQDGVY----G--TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGG 90 (491)
Q Consensus 19 ~v~i~~~N~l~~-~~siH~-HG~~~~~~~~~DG~~----~--~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl 90 (491)
++++||.|.... ...+|+ ||..... -..||.+ . .+..|.||++++..++++ +.|+||++++........+
T Consensus 201 ~~RlRliNa~~~~~~~~~i~dg~~~~v-i~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~ 278 (451)
T 2uxt_A 201 WVRLRLLNASNSRRYQLQMNDGRPLHV-ISGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRI 278 (451)
T ss_dssp EEEEEEEECCSSCCEEEEETTSCCEEE-EECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------
T ss_pred EEEEEEEccCCceeEEEEECCCCeEEE-EEeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCcccccccc
Confidence 678889999864 567999 8865321 1378863 2 456799999999999996 6899999998653221111
Q ss_pred e-----------eEEE-EecCCCCCCCCCCCCCcceEEeeecccCCH-HHHHHHHhcCCCCCCCceEEEcCcCCC--cce
Q 011178 91 Y-----------GGIK-IASRPLIPVPFDPPAGDFTILAGDWYKKNH-TDLKAILDSGSDLPFPDGLVINGRGSN--ANT 155 (491)
Q Consensus 91 ~-----------G~li-V~~~~~~~~~~~~~~~e~~l~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~~vNG~~~~--~~~ 155 (491)
. .+++ +....... +. ..+++..|..+..... ......+.-. ..++|||+.+. .+.
T Consensus 279 ~~~~~~~~~~~~~~il~~~~~~~~~-~~---~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~~~~~ 348 (451)
T 2uxt_A 279 RGFFEPSSILVSTLVLTLRPTGLLP-LV---TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDVNRID 348 (451)
T ss_dssp ------CCCCSCCEEEEEEECSCCC--------CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCTTCCC
T ss_pred ccccccCCCCCCcceEEEEecCCCc-Cc---cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCCCCCc
Confidence 1 1111 11111000 00 0000000000000000 0000000000 03578999863 346
Q ss_pred EEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC---CCCccCeEEEcCCceEEEEEEeCCCCcc----eEEE
Q 011178 156 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT---LQNTYDSLDIHLGQSYSVLVRADQPPQG----YYIV 228 (491)
Q Consensus 156 ~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~---~p~~~~~l~l~pGeR~dv~v~~~~~~g~----~~i~ 228 (491)
+.++.|++++|+|+|. ..+.|||+||.|+|++.||.+. +|...|++.+ |+++.|.|+++ .+|. |.+.
T Consensus 349 ~~~~~G~~~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~H 422 (451)
T 2uxt_A 349 VTAQQGTWERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFN 422 (451)
T ss_dssp EEEETTCEEEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEE
T ss_pred EEcCCCCEEEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEe
Confidence 8999999999999998 4799999999999999999865 4667899999 99999999998 4555 7777
Q ss_pred EEee
Q 011178 229 ISTR 232 (491)
Q Consensus 229 ~~~~ 232 (491)
++..
T Consensus 423 CHil 426 (451)
T 2uxt_A 423 SQTL 426 (451)
T ss_dssp ESSH
T ss_pred CCch
Confidence 7654
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.1e-09 Score=115.45 Aligned_cols=238 Identities=12% Similarity=0.106 Sum_probs=148.3
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC----CeEeEEEeCceeE-EEEecCccCCCCccCeEEEcCCceEEEE
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIS----TSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHLGQSYSVL 215 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~pGeR~dv~ 215 (491)
-..+++||+.. .|+|+++.|+++++++.|.... ....+|.+|.... --..||.+- +..-.|.||++++..
T Consensus 43 ~~~~~~NG~~P-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~~Y~ 117 (521)
T 1v10_A 43 RSAVTAEGTTI-APLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF----VNQCPIIPNESFVYD 117 (521)
T ss_dssp EEEEEESSSSS-CCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTEEEEEE
T ss_pred EEEEEECCccC-CCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcc----eeeCCcCCCCeEEEE
Confidence 35789999864 7999999999999999999872 5778888886542 123577642 233458899999999
Q ss_pred EEeCCCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhh--ccCCCCCCCCCCCCCCC
Q 011178 216 VRADQPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSL--RRNLTASGPRPNPQGSY 292 (491)
Q Consensus 216 v~~~~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~--~~~l~~~~~~~~p~~~~ 292 (491)
+++.+.+|+||...+.. .+. ....|.|.+.+... +.+. + .+.+ .....-+ +|..... +
T Consensus 118 f~~~~~~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~----~~~~-~-~~~d--~~e~~l~l~D~~~~~~-------~-- 178 (521)
T 1v10_A 118 FVVPGQAGTYWYHSHLS--TQYCDGLRGAFVVYDPND----PHLS-L-YDVD--DASTVITIADWYHSLS-------T-- 178 (521)
T ss_dssp EECTTCCEEEEEEECST--TGGGGTCEEEEEEECTTC----TTGG-G-CSBC--SGGGEEEEEEECSSCC-------C--
T ss_pred EecCCCCccEEEEeccC--CchhcCceEEEEEcCCcc----cccc-c-CCCC--CceeEEEEcccccCCH-------H--
Confidence 99655689999988763 232 23344444433211 1100 0 0110 0000000 1111100 0
Q ss_pred CccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcE
Q 011178 293 HYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGF 372 (491)
Q Consensus 293 ~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 372 (491)
.+...... .........|||+.+.....+. .....++++.|++
T Consensus 179 ---------~~~~~~~~-~~~~~d~~liNG~~~~~~~~~~---------------------------~~~~~~~v~~G~~ 221 (521)
T 1v10_A 179 ---------VLFPNPNK-APPAPDTTLINGLGRNSANPSA---------------------------GQLAVVSVQSGKR 221 (521)
T ss_dssp ----------------C-CCSCCSEEEETTBCCCSSCGGG---------------------------SCCCEEEECTTCE
T ss_pred ---------HHhhccCC-CCCCCCEEEECCcccCCCCCCC---------------------------CCceEEEECCCCE
Confidence 00000000 0001124678887542100000 0124578899999
Q ss_pred EEEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeeeecch
Q 011178 373 AEVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIRSENW 450 (491)
Q Consensus 373 v~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~HCHil 450 (491)
++|+|.|.+.. .|.|||+||.|.|++..++. ..|...|++.|.+|+.+.|.++++. +|.|.++|+..
T Consensus 222 ~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~-----------~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 222 YRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS-----------HQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp EEEEEEECCSSCCEEEEETTCCEEEEEETTEE-----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred EEEEEEecCCcccEEEEECCCeEEEEecCCcc-----------ccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 99999999865 58999999999999996431 1356789999999999999999976 69999999864
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.5e-09 Score=115.13 Aligned_cols=253 Identities=14% Similarity=0.141 Sum_probs=150.8
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEE-EecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLV-EVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~vi-a~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
-..+++||+.. .|+|+++.|+++++++.|........+|.+|....-- ..||.+- +..-.|.||+++...++++
T Consensus 22 ~~~~~~Ng~~P-GP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~tY~f~~~ 96 (552)
T 1aoz_A 22 NIVMGINGQFP-GPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS----ISQCAINPGETFFYNFTVD 96 (552)
T ss_dssp EEEEEETTBSS-CCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC
T ss_pred EEEEEECCccC-CCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcc----cccCCcCCCCeEEEEEECC
Confidence 35799999864 7999999999999999999875577888888643211 1588653 2345689999999999996
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
.+|+||...+.. .+. ....|.|....... ...+.+.. .+. ||.......+...+... +.
T Consensus 97 -~~GT~wYHsH~~--~q~~~Gl~G~liV~~~~~-~~~~~~~d--~e~~l~l~Dw~~~~~~~~~~~~~~~-----~~---- 161 (552)
T 1aoz_A 97 -NPGTFFYHGHLG--MQRSAGLYGSLIVDPPQG-KKEPFHYD--GEINLLLSDWWHQSIHKQEVGLSSK-----PI---- 161 (552)
T ss_dssp -SCEEEEEEECST--TTGGGTCEEEEEEECCTT-CCCSSCCS--EEEEEEEEEECSSCHHHHHHHTTSS-----SC----
T ss_pred -CCEEEEEEECch--hHHhccCeeeEEEeCCcc-cCCCCCCC--ccceEEeecccCCCHHHHHhhhhcc-----cc----
Confidence 689999988753 232 22344444443321 11111110 111 11111000000000000 00
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
. .........|||+.... ..... .+. .....+. .. +........+.++.|+++
T Consensus 162 ------------~----~~~~~~~~liNG~~~~~--c~~~~-~~~-~~~~~c~------~~-~~~~~~~~~~~v~~G~~~ 214 (552)
T 1aoz_A 162 ------------R----WIGEPQTILLNGRGQFD--CSIAA-KYD-SNLEPCK------LK-GSESCAPYIFHVSPKKTY 214 (552)
T ss_dssp ------------C----CCCSCSEEEETTBCCSS--SBTTG-GGC-TTSCBCC------CC-SCSTTSCCCEEECTTCEE
T ss_pred ------------c----CCCCCCeEEECCccccC--cccCc-ccc-ccccccc------cc-CCCCCCceEEEEcCCCEE
Confidence 0 00011245788876321 00000 000 0000000 00 000001125789999999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC--cceeeeeecch
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN--VGMWNIRSENW 450 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn--pG~w~~HCHil 450 (491)
+|+|.|.+.. .+-|||+||.|.|++..++. ..|...|++.|.+|+.+.|.+++++ +|.|.++|+..
T Consensus 215 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~-----------~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 215 RIRIASTTALAALNFAIGNHQLLVVEADGNY-----------VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp EEEEEECCSSCEEEEEETTCCEEEEEETTEE-----------EEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEEcccccceEEEEEcCcEEEEEEECCcc-----------cCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 9999999865 48999999999999996421 1356789999999999999999943 79999999986
Q ss_pred h
Q 011178 451 A 451 (491)
Q Consensus 451 ~ 451 (491)
.
T Consensus 284 ~ 284 (552)
T 1aoz_A 284 A 284 (552)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.3e-09 Score=111.30 Aligned_cols=217 Identities=12% Similarity=0.121 Sum_probs=137.0
Q ss_pred CeEEE--eeeEEEEEEecCCC-CCeeeecccCCCCCCCCCCCCC-----CCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 12 CSLIT--HLYTHLVVLNFIYM-APLITLNGVQQRRNSWQDGVYG-----TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N~l~~-~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
++++| |+++++||.|.... ...+|++|..... -..||.+. ....|.||++++..+++.+.+|+||.+++..
T Consensus 185 ~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 263 (503)
T 1hfu_A 185 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263 (503)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred eEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-EeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccc
Confidence 66766 36789999999764 5678888875432 13788742 2345899999999999975579999999853
Q ss_pred c--c-----ccCCceeEEEEecCCCCCCCCCCCCCcceEEeeecccCCH--HHHHH---------HHhcCCCCCCCceEE
Q 011178 84 F--H-----KAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNH--TDLKA---------ILDSGSDLPFPDGLV 145 (491)
Q Consensus 84 ~--q-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~--~~~~~---------~~~~~~~~~~~~~~~ 145 (491)
. + ...|+..+++.........+......+. ..+.+...... ..... .+.-.. ...+..++
T Consensus 264 ~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~-~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~-~~~~~~~~ 341 (503)
T 1hfu_A 264 KGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP-AQLNEADLHALIDPAAPGIPTPGAADVNLRFQL-GFSGGRFT 341 (503)
T ss_dssp SCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCE-EEETTEEE
T ss_pred cCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-CCCccccccccCccCCCCcccCCcceEEEEEEe-eccCceEE
Confidence 1 1 2344544555443221111110000000 00001000000 00000 000000 00012578
Q ss_pred EcCcCCCc-----------------------ceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCcc----CCC
Q 011178 146 INGRGSNA-----------------------NTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTH----TLQ 198 (491)
Q Consensus 146 vNG~~~~~-----------------------~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~----~~p 198 (491)
|||+.+.. ..+.++.|++|+++++|......+.|||+||.|+|++.+|.. ..|
T Consensus 342 iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p 421 (503)
T 1hfu_A 342 INGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNP 421 (503)
T ss_dssp ETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSB
T ss_pred ECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCC
Confidence 99988521 357899999999999964445689999999999999999875 257
Q ss_pred CccCeEEE-cCCceEEEEEEeCCCCcceEEEEEee
Q 011178 199 NTYDSLDI-HLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 199 ~~~~~l~l-~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
...|++.| .||+++.|.++++ .||.|.+.++..
T Consensus 422 ~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 422 VKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp CEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 77899999 7999999999998 789888888754
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=6.5e-09 Score=108.53 Aligned_cols=231 Identities=13% Similarity=0.139 Sum_probs=146.4
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC----CeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEE
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGIS----TSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLV 216 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v 216 (491)
..+++||+.. .|+|+++.|+++++++.|.... ....+|.+|....- -..||.+- +.+-.|.||+++...+
T Consensus 23 ~~~~~NG~~P-GP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~s~tY~f 97 (499)
T 3pxl_A 23 QAVVVNGVTP-GPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAF----INQCPISPGHSFLYDF 97 (499)
T ss_dssp EEEEETTBSS-CCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEE
T ss_pred EEEEECCccc-CCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEE
Confidence 4789999874 7999999999999999999864 35778888875421 34677542 2334689999999999
Q ss_pred EeCCCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhh--hccCCCCCCCCCCCCCCCC
Q 011178 217 RADQPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARS--LRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 217 ~~~~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~--~~~~l~~~~~~~~p~~~~~ 293 (491)
++++.+|+||...+.. .+. ....|.|.......+ .+. + .+.+ .....- -+|...... ..
T Consensus 98 ~~~~~~GT~wYHsH~~--~q~~~GL~G~lIV~~~~~~----~~~-~-~~~d--~~~~~l~l~Dw~~~~~~-----~~--- 159 (499)
T 3pxl_A 98 QVPDQAGTFWYHSHLS--TQYCDGLRGPFVVYDPNDP----HAS-R-YDVD--NDDTVITLADWYHTAAK-----LG--- 159 (499)
T ss_dssp ECSSCCEEEEEEECST--TGGGGTCEEEEEEECTTCT----TGG-G-CSBC--SGGGEEEEEEECSSCTT-----TS---
T ss_pred EcCCCCceeeeeccch--hHHhccceeEEEEcCCccc----ccc-c-CCCC--CceEEEEEEcccCCccc-----cc---
Confidence 9965689999988763 222 233444444322111 000 0 0111 000000 011111000 00
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
.. .........|||+..... .+ . .....+.++.|+++
T Consensus 160 ------------~~---~p~~~d~~liNG~~~~~~-~~----------------------~-----~~~~~~~v~~G~~~ 196 (499)
T 3pxl_A 160 ------------PR---FPGGADATLINGKGRAPS-DS----------------------V-----AELSVIKVTKGKRY 196 (499)
T ss_dssp ------------CS---SCSSCSEEEETTBCCCTT-CT----------------------T-----CCCCEEEECTTCEE
T ss_pred ------------cC---CCCCCcEEEECCCCcCCC-CC----------------------C-----CCcceEEEcCCCEE
Confidence 00 000113467787632110 00 0 01245788999999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc-ceeeeeecc
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV-GMWNIRSEN 449 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp-G~w~~HCHi 449 (491)
+|+|.|.+.. .+-|||+||.|+|++..+ . +..|...|++.|.+|+.+.|.++++.+ |.|.+.|..
T Consensus 197 RlRliNa~~~~~~~~~i~gh~~~via~DG-~----------~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 197 RFRLVSLSCNPNHTFSIDGHNLTIIEVDS-V----------NSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp EEEEEECCSSCCEEEEETTBCEEEEEETT-E----------EEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred EEEEEecCCCeeEEEEECCCeEEEEEECC-c----------ccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEec
Confidence 9999998864 489999999999999953 2 223567899999999999999999765 899899864
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=6.6e-09 Score=108.44 Aligned_cols=233 Identities=11% Similarity=0.080 Sum_probs=146.4
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCC----CeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEE
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGIS----TSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLV 216 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~----~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v 216 (491)
..++|||+.. .|+|+++.|+++++++.|.... ....+|.+|....- -..||.+- +..-.|.||+.+...+
T Consensus 24 ~~~~~NG~~P-GP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~sftY~f 98 (495)
T 3t6v_A 24 PAVNAGGTFP-GPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIVGNSFSYNF 98 (495)
T ss_dssp EEEEETTSSS-CCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEE
T ss_pred EEEEECCccc-CCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEE
Confidence 5789999874 7999999999999999999864 35778888865421 24688642 2344689999999999
Q ss_pred EeCCCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhh--hccCCCCCCCCCCCCCCCC
Q 011178 217 RADQPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARS--LRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 217 ~~~~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~--~~~~l~~~~~~~~p~~~~~ 293 (491)
++++.+|+||...+.. .+. ....|.|.......+ .+.. .+.+ .....- -+|.......
T Consensus 99 ~~~~~~GT~wYHsH~~--~q~~~GL~G~lIV~~~~~~----~~~~--~~~d--~~e~~l~l~Dw~~~~~~~--------- 159 (495)
T 3t6v_A 99 NVPGMAGTYWYHSHLT--TQYCDGLRGPFVVYDPNDP----DANL--YDVD--DDTTIITLADWYHVLAKE--------- 159 (495)
T ss_dssp ECTTCCEEEEEEECST--TGGGGTCEEEEEEECTTCT----TGGG--CSBC--SGGGEEEEEEECSSCGGG---------
T ss_pred EeCCCCceeeeeccch--hHHhcCceEEEEEcCcccc----cccc--CCCC--CceeEEEEecccCCchhh---------
Confidence 9965689999988763 222 233444444322111 0000 0110 000000 0111100000
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
+.. ..........|||+..... . |. ......++++.|+++
T Consensus 160 -----------~~~--~~p~~~d~~liNG~g~~~~-~----------------------~~----~~~~~~~~v~~G~~~ 199 (495)
T 3t6v_A 160 -----------MGA--GGAITADSTLIDGLGRTHV-N----------------------VA----AVPLSVITVEVGKRY 199 (495)
T ss_dssp -----------SCS--SSCCCCSEEEETTBCCBSS-S----------------------CC----CCCCCEEEECTTCEE
T ss_pred -----------hcc--CCCCCCcEEEECCcCcCCC-C----------------------cc----cCCceEEEEcCCCEE
Confidence 000 0000112467787632110 0 00 001245788999999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc-ceeeeeecc
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV-GMWNIRSEN 449 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp-G~w~~HCHi 449 (491)
+|+|.|.+.. .+.|||+||.|+|++..+ . +..|...|++.|.+|+.+.|.++++.+ |.|.++|..
T Consensus 200 RlRliN~~~~~~~~~~i~gh~~~via~DG-~----------~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 200 RMRLVSISCDPNYDFSIDGHDMTIIETDG-V----------DSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp EEEEEECCSSCCEEEEETTCCEEEEEETT-E----------EEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred EEEEEecCCCeeEEEEECCCeEEEEEeCC-c----------ccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 9999998754 489999999999999953 2 223567899999999999999999765 999999875
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.02 E-value=5.8e-10 Score=91.41 Aligned_cols=71 Identities=11% Similarity=0.005 Sum_probs=53.6
Q ss_pred CCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCcccccc
Q 011178 11 GCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKA 87 (491)
Q Consensus 11 G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 87 (491)
.++|+| ||+| +++|..+.++++|+++. +||... .+..+.||++++|.| +++|+|||||+.+.
T Consensus 32 P~~i~v~~Gd~V--~~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~--- 96 (105)
T 2ov0_A 32 TPELHVKVGDTV--TWINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP--- 96 (105)
T ss_dssp SSEEEECTTCEE--EEEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---
T ss_pred CCEEEECCCCEE--EEEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC---
Confidence 345555 3543 45699888899999852 356654 456689999999988 47999999999863
Q ss_pred CCceeEEEEe
Q 011178 88 AGGYGGIKIA 97 (491)
Q Consensus 88 ~Gl~G~liV~ 97 (491)
||.|.|+|+
T Consensus 97 -gM~G~i~V~ 105 (105)
T 2ov0_A 97 -FMRGKVVVE 105 (105)
T ss_dssp -TCEEEEEEC
T ss_pred -CCEEEEEEC
Confidence 999999985
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.00 E-value=4.6e-10 Score=111.86 Aligned_cols=90 Identities=14% Similarity=0.182 Sum_probs=69.9
Q ss_pred CCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCC-------C--CCCCCCCCCeEEEEEEe--CCCcccee
Q 011178 11 GCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVY-------G--TNCPIPPGKNFTYVLQV--KDQIGSYF 77 (491)
Q Consensus 11 G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~--~q~~i~PG~~~~Y~f~~--~~~~Gt~w 77 (491)
++++++ |++|+|+|.|.....+.+|+||...... .+|.. . ....|.||++++|.|++ .+.+|+|+
T Consensus 208 ~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~ 285 (343)
T 3cg8_A 208 GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWM 285 (343)
T ss_dssp CCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEE
T ss_pred CccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEE
Confidence 344444 5788999999998999999999863221 23321 1 22459999999999996 25799999
Q ss_pred EeCCccccccCCceeEEEEecCCCC
Q 011178 78 YFPSLAFHKAAGGYGGIKIASRPLI 102 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~~~~~~ 102 (491)
||||...+...||.|.|+|.+++..
T Consensus 286 ~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 286 YHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp EEECSHHHHHTTCEEEEEEECTTSC
T ss_pred EeCCCHHHHhccCcEEEEEecCCCC
Confidence 9999999999999999999986643
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.4e-09 Score=87.74 Aligned_cols=84 Identities=14% Similarity=0.078 Sum_probs=63.6
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc-cCcce
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVGM 442 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a-dnpG~ 442 (491)
.+.++.|++|.|+ |.+...|.||+|+..+.. . .|. .. ....+|++.+.||+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~----~~------~~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD----LA------KSLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH----HH------HHHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc----cc------hhccccceeeCCCCEEEEEEecCCCCce
Confidence 4688999999886 777678999999765411 0 010 00 0011477889999999999988 89999
Q ss_pred eeeeecchhhhhcceEEEEEEe
Q 011178 443 WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|.|||| .|.++||+..+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 79999999999885
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1.6e-09 Score=88.85 Aligned_cols=71 Identities=17% Similarity=0.261 Sum_probs=52.1
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCC-----CCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGV-----YGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~-----~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|....++++|+|+...+. .+|. ......+.||++++|.|++++++|+|||||| .+...||.|.|+|+
T Consensus 31 ~~~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 31 EFLNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 356886678899988764321 2332 0123458999999999987558999999999 55667999999997
Q ss_pred c
Q 011178 98 S 98 (491)
Q Consensus 98 ~ 98 (491)
+
T Consensus 106 ~ 106 (106)
T 2gim_A 106 G 106 (106)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.8e-08 Score=106.56 Aligned_cols=239 Identities=12% Similarity=0.014 Sum_probs=146.3
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeE-EEEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
-..+++||+.. .|+|+++.|+++++++.|........+|.+|.... --..||.+- +.+-.|.||+.+...++++
T Consensus 86 ~~~~~~NG~~P-GP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~----vTq~pI~PG~sftY~f~~~ 160 (580)
T 3sqr_A 86 RSAMTFNGTVP-GPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPG----VTQCPIAPGDTLTYKFQVT 160 (580)
T ss_dssp EEEEEETTBSS-CCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC
T ss_pred EEEEEECCccC-CceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCc----cccCCCCCCCeEEEEEECC
Confidence 35799999964 79999999999999999998755677888776542 134688643 2344689999999999998
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCC-C-CCccccchhhhhhhhccCCCCCCCCCCCCCCCCccc
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPG-G-PTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGL 296 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~-~-p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 296 (491)
.+|+||...+.. .+. ....|.|....... ..... . +..-.||.......+...+...
T Consensus 161 -q~GT~WYHsH~~--~q~~~GL~G~lIV~~p~~---~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~-------------- 220 (580)
T 3sqr_A 161 -QYGTTWYHSHFS--LQYGDGLFGPLIINGPAT---ADYDEDVGVIFLQDWAHESVFEIWDTARLG-------------- 220 (580)
T ss_dssp -CCEEEEEEECST--TGGGGTCEEEEEEECCCS---SCCSEEEEEEEEEEECSSCHHHHHHHHTTS--------------
T ss_pred -CCcceEEeeccc--ccccCcCEEEEEeeCccc---CCCCccceEEEEEEEecCCHHHHHHHHhcc--------------
Confidence 479999988762 222 13344444332210 00000 0 0000011111100000000000
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
.........|||+....-+ +. + ..++........+.++.|++++|+
T Consensus 221 --------------~~~~~d~~liNG~~~~~c~-~~---------~----------~~~~~~~~~~~~~~v~~G~~yRlR 266 (580)
T 3sqr_A 221 --------------APPALENTLMNGTNTFDCS-AS---------T----------DPNCVGGGKKFELTFVEGTKYRLR 266 (580)
T ss_dssp --------------CCCCBSEEEETTBCCCCCT-TC---------C----------CTTBCCCCCCCEEECCTTCEEEEE
T ss_pred --------------CCCCCceEEECCcccCCCc-cc---------c----------ccccccCCCceeEEEcCCCEEEEE
Confidence 0001123567887432100 00 0 000000012346788999999999
Q ss_pred EEcCCCCC-CceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeeeecc
Q 011178 377 FENPEDTL-QSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIRSEN 449 (491)
Q Consensus 377 i~N~~~~~-HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~HCHi 449 (491)
|+|.+... +-|||+||.|.|++.. |. ...|...|++.|.+|+.+.|.++++. +|.|-+.-..
T Consensus 267 lINa~~~~~~~~~i~gh~~~VIa~D-G~----------~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~ 330 (580)
T 3sqr_A 267 LINVGIDSHFEFAIDNHTLTVIAND-LV----------PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNW 330 (580)
T ss_dssp EEECCSSCCEEEEETTCCEEEEEET-TE----------EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCC
T ss_pred EEeccCCceeeEEeCCceEEEEEeC-Cc----------cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEec
Confidence 99998654 7999999999999995 32 12366789999999999999999975 5888777554
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.1e-09 Score=89.12 Aligned_cols=75 Identities=19% Similarity=0.151 Sum_probs=56.4
Q ss_pred CCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcccccc
Q 011178 10 LGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKA 87 (491)
Q Consensus 10 ~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 87 (491)
..++|+| |++|+++++|.... +||+.... .|. +..+.||++++|.|++ +++|+||||||.+....
T Consensus 36 ~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~ 102 (112)
T 1iby_A 36 EPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI 102 (112)
T ss_dssp ESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT
T ss_pred cCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH
Confidence 4566665 57889999999754 66665422 122 3568999999999998 58999999999775433
Q ss_pred CCceeEEEEec
Q 011178 88 AGGYGGIKIAS 98 (491)
Q Consensus 88 ~Gl~G~liV~~ 98 (491)
+|.|.|+|++
T Consensus 103 -~M~g~i~V~~ 112 (112)
T 1iby_A 103 -HLPGTLNVVE 112 (112)
T ss_dssp -BCCEEEEEEC
T ss_pred -HCEEEEEEeC
Confidence 3999999974
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=4.6e-09 Score=103.38 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=76.4
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC---CCCccCeEEEcCCceEEEEEEeCC--CCcceEE
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT---LQNTYDSLDIHLGQSYSVLVRADQ--PPQGYYI 227 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~---~p~~~~~l~l~pGeR~dv~v~~~~--~~g~~~i 227 (491)
.+.+.++.|++|||||+|++. ..+.|+|+||.|+|++.||... .+..++++.|.||||++++|.+.+ .||.|.+
T Consensus 173 ~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~ 251 (313)
T 3tas_A 173 GPDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMY 251 (313)
T ss_dssp CCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEE
T ss_pred ccccccccCCEEEEEEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEE
Confidence 367899999999999999995 4899999999999999998765 356689999999999999998764 5899888
Q ss_pred EEEeeccCCCcceEEEEEecCCC
Q 011178 228 VISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 228 ~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
.++...- ......+++.+....
T Consensus 252 HCHi~~H-~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 252 HCHVQSH-SDMGMVGLFLVKKPD 273 (313)
T ss_dssp EECSHHH-HHTTCEEEEEEECTT
T ss_pred EeCChHH-HHCCCeEEEEEECCC
Confidence 8775421 112356777776443
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=3.4e-08 Score=104.82 Aligned_cols=230 Identities=11% Similarity=0.016 Sum_probs=144.3
Q ss_pred ceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeE-EEEecCccCCCCccCeEEEcC-CceEEEEEEeC
Q 011178 142 DGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKML-LVEVEGTHTLQNTYDSLDIHL-GQSYSVLVRAD 219 (491)
Q Consensus 142 ~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~-via~DG~~~~p~~~~~l~l~p-GeR~dv~v~~~ 219 (491)
..+++||+.. .|+|++++|+++++++.|........+|.+|.... --..||.+- +..-.|.| |+++...++++
T Consensus 56 ~~~~~Ng~~P-GP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----~tq~~I~P~G~~~~Y~f~~~ 130 (559)
T 2q9o_A 56 KVMLINGNIM-GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANG----VTECPIPPKGGQRTYRWRAR 130 (559)
T ss_dssp EEEEETTBSS-CCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTTEEEEEEEECC
T ss_pred EEEEECCccc-CCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCc----cccCccCCCCCeEEEEEECC
Confidence 4789999864 79999999999999999999655778888886542 124588653 23345899 99999999998
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCC--CCccccchhhhhhhhccCCCCCCCCCCCCCCCCccc
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGG--PTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGL 296 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~--p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 296 (491)
| +|+||...+.. .+. ....|.|.+.+... ...... +..-.+|.......+..
T Consensus 131 q-~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~---~~~d~d~~~l~l~Dw~~~~~~~~~~------------------- 185 (559)
T 2q9o_A 131 Q-YGTSWYHSHFS--AQYGNGVVGTIQINGPAS---LPYDIDLGVFPITDYYYRAADDLVH------------------- 185 (559)
T ss_dssp S-CEEEEEEECST--TGGGGTCEEEEEEECCCS---SCCSEEEEEEEEEEECSSCHHHHHH-------------------
T ss_pred C-CEEEEEEEccc--chhcCCceEEEEecCCCc---CCCcccceEEEEeccccCCHHHHhh-------------------
Confidence 5 79999988763 222 12344444433211 000000 00000111110000000
Q ss_pred cccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEE
Q 011178 297 INTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376 (491)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 376 (491)
..............|||+.+.. .. .+ .....+.++.|++++|+
T Consensus 186 ---------~~~~~~~~~~d~~liNG~~~~~----~~--------------------~~----g~~~~~~v~~g~~~RlR 228 (559)
T 2q9o_A 186 ---------FTQNNAPPFSDNVLINGTAVNP----NT--------------------GE----GQYANVTLTPGKRHRLR 228 (559)
T ss_dssp ---------HHTTSCCCCBSEEEETTBCBCT----TT--------------------CC----BCCCEEEECTTCEEEEE
T ss_pred ---------hhhcCCCCccceeEECCccccC----cC--------------------CC----CCceEEEEcCCCEEEEE
Confidence 0000000011246788876421 00 00 01235788999999999
Q ss_pred EEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-cceeeeeecc
Q 011178 377 FENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-VGMWNIRSEN 449 (491)
Q Consensus 377 i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-pG~w~~HCHi 449 (491)
|.|.+.. .+-|||+||.|.|++..+.. ..|...|++.|.+|+.+.|.+.++. +|.+-+....
T Consensus 229 liNa~~~~~~~~~i~gh~~~vi~~DG~~-----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 229 ILNTSTENHFQVSLVNHTMTVIAADMVP-----------VNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp EEECCSSCCEEEEETTBCEEEEEETTEE-----------EEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEEC
T ss_pred EEecCCCceEEEEECCCceEEEecCCcc-----------cCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEe
Confidence 9999865 48999999999999996321 1356789999999999999999965 6777666654
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=88.37 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=70.4
Q ss_pred EeecCCcEEEEEEEc--CCCCCCceeccCC--CeEEEe-ec--cC---CCCCCCCCCcccCCCCceeeEEeCCCCEEEEE
Q 011178 365 MAADFRGFAEVVFEN--PEDTLQSWHIDGH--NFFAVG-MD--GG---EWTPASRLTYNLRDTISRCTVQVYPKSWTAVY 434 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N--~~~~~HP~HlHG~--~F~Vl~-~g--~g---~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~ir 434 (491)
++++.|+.|.|++.| .+.+.|.||++.. .|.-+. .+ .+ .|-+. .-....+++|..|.||+...+.
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPP-----PDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC-----TTCTTEEEECCCBCTTEEEEEE
T ss_pred EEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCc-----cccccccccceeeCCCceeEEE
Confidence 678999999999999 6668899999843 121100 00 00 01000 0011347899999999999999
Q ss_pred EEccCcceeeeeecchhhhhcceEEEEEEe
Q 011178 435 VPLDNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 435 f~adnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|.++.||.|.|||++..|...||...+.|.
T Consensus 110 ~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 110 FRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999885
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.6e-07 Score=95.83 Aligned_cols=206 Identities=12% Similarity=0.125 Sum_probs=132.2
Q ss_pred CeEEEee-eEEEEEEecCC-CCCeeeecccCCCCCCCCCCCC----C--CCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 12 CSLITHL-YTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVY----G--TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 12 ~~l~v~d-~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~----~--~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
+++.|.. . ++|+.|... ....+|++|..... -..||.. . ....|.|||+++..++++ +.|+|-.-++..
T Consensus 222 p~l~v~~g~-RlRliNa~~~~~~~l~i~g~~~~v-Ia~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~ 298 (481)
T 3zx1_A 222 PKIKLATNE-RIRIYNATAARYLNLRIQGAKFIL-VGTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYY 298 (481)
T ss_dssp CEEEEETTE-EEEEEECCSSCCEEEEETTCEEEE-EEETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCC
T ss_pred ceEEecCCC-EEEEEecCCCeEEEEEECCCceEE-EEcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecc
Confidence 3444432 3 899999975 55689998876422 2378642 2 345699999999999995 678877766532
Q ss_pred ccccCCc----------eeEEEEecCC-CCCC------CCCCCCCcceEEeeecccC-------CHHHHHHHHhcCCCCC
Q 011178 84 FHKAAGG----------YGGIKIASRP-LIPV------PFDPPAGDFTILAGDWYKK-------NHTDLKAILDSGSDLP 139 (491)
Q Consensus 84 ~q~~~Gl----------~G~liV~~~~-~~~~------~~~~~~~e~~l~l~d~~~~-------~~~~~~~~~~~~~~~~ 139 (491)
.. .|+ ..-+-+.... ..|. +.+..+.+..+.|+....+ ........+
T Consensus 299 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~------- 369 (481)
T 3zx1_A 299 DR--DKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIAL------- 369 (481)
T ss_dssp CC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHH-------
T ss_pred cc--cCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhcccccccccccccccc-------
Confidence 11 111 1111222111 1111 0111122333444332110 000000000
Q ss_pred CCceEEEcCcCCC--cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEe--cCccC---CCCccCeEEEcCCceE
Q 011178 140 FPDGLVINGRGSN--ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV--EGTHT---LQNTYDSLDIHLGQSY 212 (491)
Q Consensus 140 ~~~~~~vNG~~~~--~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~--DG~~~---~p~~~~~l~l~pGeR~ 212 (491)
...++|||+.+. .+.+.++.|++++|+|+|.+. ..+.|||+||.|+|++. +|... ++...|++.|.||+++
T Consensus 370 -~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~ 447 (481)
T 3zx1_A 370 -ASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEEL 447 (481)
T ss_dssp -HTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEE
T ss_pred -cceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEE
Confidence 125899999863 467999999999999999764 58999999999999999 99765 3456799999999999
Q ss_pred EEEEEeCCCCcceEEEEEee
Q 011178 213 SVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 213 dv~v~~~~~~g~~~i~~~~~ 232 (491)
.|.++++ .+|.|.+.++..
T Consensus 448 ~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 448 RLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp EEEECCC-SCEEEEEEESSH
T ss_pred EEEEEcC-CCeeEEEEcCCh
Confidence 9999997 789888877653
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.78 E-value=5.2e-08 Score=102.77 Aligned_cols=225 Identities=16% Similarity=0.120 Sum_probs=142.7
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEE-EEecCccCCCCccCeEEEcCCceEEEEEEeC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL-VEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~v-ia~DG~~~~p~~~~~l~l~pGeR~dv~v~~~ 219 (491)
-..+++||+.. .|+|+++.|+++++++.|........+|.+|..... -..||.+- +..-.|.||+++...++++
T Consensus 22 ~~~~~~Ng~~P-GP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~----vtq~pI~PG~~~~Y~f~~~ 96 (534)
T 1zpu_A 22 RPVITCNGQFP-WPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPF----LTQCPIAPGSTMLYNFTVD 96 (534)
T ss_dssp EEEEEETTBSS-CCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECS
T ss_pred EEEEEECCccC-CccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCc----cccCCcCCCCeEEEEEEeC
Confidence 35789999864 799999999999999999987557788888865431 24688652 2334589999999999998
Q ss_pred CCCcceEEEEEeeccCCC-cceEEEEEecCCCCCCCCCCCCCCCccc-----cchhhhhhhhccCCCCCCCCCCCCCCCC
Q 011178 220 QPPQGYYIVISTRFTSQV-LSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWSLEQARSLRRNLTASGPRPNPQGSYH 293 (491)
Q Consensus 220 ~~~g~~~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 293 (491)
+.+|+||...+.. .+. ....|.|...+... +. ....+. ||.......+...+.. ...+.+
T Consensus 97 ~~~GT~wYH~H~~--~q~~~Gl~G~liV~~~~~----p~--~~d~e~~l~l~Dw~~~~~~~~~~~~~~---~~~~~g--- 162 (534)
T 1zpu_A 97 YNVGTYWYHSHTD--GQYEDGMKGLFIIKDDSF----PY--DYDEELSLSLSEWYHDLVTDLTKSFMS---VYNPTG--- 162 (534)
T ss_dssp SCCEEEEEECCSS--SGGGGTCEEEEEEECTTC----CS--CCSEEEEEEEEEECSSCHHHHHHHHSS---TTCTTC---
T ss_pred ccceeEEEEEcCc--ccccCcceeeEEeCCCCC----CC--CCcceEEEEeeccccCCHHHHHHHHhc---cccCCC---
Confidence 6789999987753 222 12344444443221 11 010111 1211111000000000 000000
Q ss_pred ccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEE
Q 011178 294 YGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFA 373 (491)
Q Consensus 294 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 373 (491)
...-.....|||+.. ..+.++.|+++
T Consensus 163 -----------------~~~~~d~~liNG~~~-------------------------------------~~~~v~~g~~~ 188 (534)
T 1zpu_A 163 -----------------AEPIPQNLIVNNTMN-------------------------------------LTWEVQPDTTY 188 (534)
T ss_dssp -----------------CCCCCSEEEETTBSS-------------------------------------CEEECCSSCEE
T ss_pred -----------------CCCCCceEEECCCCc-------------------------------------eEEEEECCCEE
Confidence 000012345666421 23678889999
Q ss_pred EEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC--cceeeeeecc
Q 011178 374 EVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN--VGMWNIRSEN 449 (491)
Q Consensus 374 ~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn--pG~w~~HCHi 449 (491)
+|+|.|.+.. .+-|||+||.|.|++..++. ..|...|++.|.+|+.+.|.+.++. .|.+.+....
T Consensus 189 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~-----------~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~ 256 (534)
T 1zpu_A 189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGIT-----------TEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKF 256 (534)
T ss_dssp EEEEEECCSSCCEEEEETTBCEEEEEETTEE-----------EEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEE
T ss_pred EEEEEeccCCceEEEEEcCCeeEEEeccCcC-----------ccccEeceEEECccceEEEEEEcCCCCCCcEEEEEec
Confidence 9999999865 48999999999999996431 1356679999999999999999964 3667777654
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.6e-08 Score=87.13 Aligned_cols=79 Identities=9% Similarity=0.002 Sum_probs=56.5
Q ss_pred eeeEEEEEEecCCC-CCeeeecccCC-----------------CCCCCCCC-CCCCCCCCCCCCeEEEEEEeCCCcccee
Q 011178 17 HLYTHLVVLNFIYM-APLITLNGVQQ-----------------RRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 17 ~d~v~i~~~N~l~~-~~siH~HG~~~-----------------~~~~~~DG-~~~~q~~i~PG~~~~Y~f~~~~~~Gt~w 77 (491)
||+|+++++|.-.. +++++.|+... ...+..+. +......|.||+++++.|++ +++|+|+
T Consensus 42 G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~-~~pG~y~ 120 (139)
T 2aan_A 42 GQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA-PAAGTYL 120 (139)
T ss_dssp TCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC-CSSEEEE
T ss_pred CCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC-CCCeEEE
Confidence 46678889998766 78888887421 00000111 11112348999999999999 4899999
Q ss_pred EeCCccccccCCceeEEEEe
Q 011178 78 YFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~ 97 (491)
||||...+.. ||.|.|+|+
T Consensus 121 f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 121 YICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EECCSTTTTT-TSEEEEEEC
T ss_pred EEcCCCChHH-cCEEEEEEC
Confidence 9999887777 999999984
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.73 E-value=3.4e-08 Score=79.60 Aligned_cols=77 Identities=9% Similarity=-0.062 Sum_probs=59.8
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCc-eeeEEeCCCCEEEEEEEccCcce
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTIS-RCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~-rDTv~v~p~~~~~irf~adnpG~ 442 (491)
.+.++.|++|.|+ |.+...|.+|+++..+- +.. .+.+ .|+..+.||+...+.| +.||.
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~---------------~~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADT---------------AAKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHH---------------HHHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccc---------------cccccccccccCCCCEEEEEc--CCCeE
Confidence 4688999999886 66667899999875321 000 0012 5789999999988876 78999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||+ .|..+||+..+.|
T Consensus 79 y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 5999999999987
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.69 E-value=5.6e-08 Score=78.29 Aligned_cols=80 Identities=16% Similarity=0.065 Sum_probs=60.7
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|+| .|.+...|.+|+|+..+ ...++. ...++|+..+.||+...++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~------p~~~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI------PSGVNA---------DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS------CTTCCH---------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCC------CCcccc---------ccccccceecCCCCEEEEEe--CCCeE
Confidence 3478899999987 67777789999987422 000000 01257899999999988866 58999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||| .|.+.||+..+.|
T Consensus 79 y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 79 YGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEEECG--GGGGGTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 5999999999987
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.69 E-value=2e-08 Score=105.52 Aligned_cols=85 Identities=16% Similarity=0.127 Sum_probs=61.7
Q ss_pred cccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc
Q 011178 6 HFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 83 (491)
Q Consensus 6 ~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 83 (491)
..+.++++|+| ||+|+++++|....... +||+.+.. .|+ ++.|.||++++|+|++ +++|+||||||..
T Consensus 507 n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~pGtY~yhC~e~ 576 (595)
T 1fwx_A 507 APSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANPGVYWYYCQWF 576 (595)
T ss_dssp TTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEEEECCSC
T ss_pred cCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCCEEEEEECCCC
Confidence 34567888877 58999999998653222 47776532 232 2568999999999999 5999999999931
Q ss_pred -ccccCCceeEEEEecCC
Q 011178 84 -FHKAAGGYGGIKIASRP 100 (491)
Q Consensus 84 -~q~~~Gl~G~liV~~~~ 100 (491)
.....||+|.|+|++++
T Consensus 577 Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 577 CHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CSTTCTTCEEEEEEECC-
T ss_pred CCCCccCCEEEEEEEcCC
Confidence 11123999999999753
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=98.64 E-value=4.7e-08 Score=95.43 Aligned_cols=104 Identities=20% Similarity=0.262 Sum_probs=81.4
Q ss_pred EEEcCcCC-CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC---CccCeEEEcCCceEEEEEEeC
Q 011178 144 LVINGRGS-NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ---NTYDSLDIHLGQSYSVLVRAD 219 (491)
Q Consensus 144 ~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p---~~~~~l~l~pGeR~dv~v~~~ 219 (491)
+.+||+.+ +.+.++++.|++|||||+|++.. .+.|+|+||.|+|++.|+....+ ...|++.|.||||++++|.+.
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 56799875 46899999999999999999975 79999999999999998876533 356999999999999999765
Q ss_pred C--CCcceEEEEEeeccCCCcceEEEEEecCC
Q 011178 220 Q--PPQGYYIVISTRFTSQVLSATSVLHYSNS 249 (491)
Q Consensus 220 ~--~~g~~~i~~~~~~~~~~~~~~ail~y~~~ 249 (491)
+ .||.|.+.+....-. .....+++.+...
T Consensus 258 ~~dnPG~w~~HCHi~~H~-~~GM~~~f~V~~~ 288 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHS-DMGMAGMFLVRNA 288 (299)
T ss_dssp TTTCSEEEEEEECSHHHH-HTTCEEEEEEECT
T ss_pred eCCCCeeEEEEcCCHHHH-hcCCeEEEEEECC
Confidence 4 589998887754211 1234566666543
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.63 E-value=8.2e-08 Score=76.07 Aligned_cols=71 Identities=14% Similarity=0.113 Sum_probs=57.3
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|+ |.+...|.+|+++.. . ...++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~~---------~--------------~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQP---------E--------------LSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEETTCG---------G--------------GCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCC---------c--------------cCcccceeCCCCEEEEEe--CCCEEE
Confidence 4678999999886 666678999998720 0 124788899999888766 889999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||+ .|...||...+.|
T Consensus 73 ~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEECT--TTGGGTCEEEEEE
T ss_pred EEEeC--CCccCCCEEEEEE
Confidence 99999 6999999999987
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.3e-06 Score=89.97 Aligned_cols=194 Identities=15% Similarity=0.105 Sum_probs=122.0
Q ss_pred CeEEE--eeeEEEEEEecCC-CCCeeee--cc---cCCCCCCCCCCCCC------CCCCCCCCCeEEEEEEeCCCcccee
Q 011178 12 CSLIT--HLYTHLVVLNFIY-MAPLITL--NG---VQQRRNSWQDGVYG------TNCPIPPGKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N~l~-~~~siH~--HG---~~~~~~~~~DG~~~------~q~~i~PG~~~~Y~f~~~~~~Gt~w 77 (491)
+++.| | ++++|+.|... ....+|+ +| ..... -..||.+. ....|.||++++..++++ .+.||
T Consensus 180 p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~ 255 (448)
T 3aw5_A 180 AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYL 255 (448)
T ss_dssp CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEE
T ss_pred ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceE
Confidence 44544 5 78999999976 4567999 76 32211 13788742 234599999999999995 47899
Q ss_pred EeCCccccccCC-------------ceeE--EEEecCCCC--CCCCC-------CCCCcceEEeeecccCCHHHHHHHHh
Q 011178 78 YFPSLAFHKAAG-------------GYGG--IKIASRPLI--PVPFD-------PPAGDFTILAGDWYKKNHTDLKAILD 133 (491)
Q Consensus 78 YH~H~~~q~~~G-------------l~G~--liV~~~~~~--~~~~~-------~~~~e~~l~l~d~~~~~~~~~~~~~~ 133 (491)
..++.......+ -... |.+.+.... +..+. ....+..+.|+.
T Consensus 256 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~~-------------- 321 (448)
T 3aw5_A 256 LKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALSL-------------- 321 (448)
T ss_dssp EEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEEE--------------
T ss_pred EEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEeC--------------
Confidence 987743211000 1111 222221111 00000 001111111110
Q ss_pred cCCCCCCCceEEEcCcCCC--cceEE-EeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC------------CC
Q 011178 134 SGSDLPFPDGLVINGRGSN--ANTFT-VDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT------------LQ 198 (491)
Q Consensus 134 ~~~~~~~~~~~~vNG~~~~--~~~~~-v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~------------~p 198 (491)
+ ...++|||+.+. .+.+. ++.|++++|+|.|.+....+.||++||.|+|++.+|.+. .|
T Consensus 322 -~-----~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p 395 (448)
T 3aw5_A 322 -S-----GMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLP 395 (448)
T ss_dssp -E-----TTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCG
T ss_pred -C-----CceeeECCCcCCCCCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCc
Confidence 0 124889999863 34567 899999999999998445899999999999999999764 23
Q ss_pred ---CccCeEEEcCCceEEEEEEeC---C-CCcceEEEEEe
Q 011178 199 ---NTYDSLDIHLGQSYSVLVRAD---Q-PPQGYYIVIST 231 (491)
Q Consensus 199 ---~~~~~l~l~pGeR~dv~v~~~---~-~~g~~~i~~~~ 231 (491)
...|++.+.||+++.|.+++. . .| |.+.++.
T Consensus 396 ~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHi 433 (448)
T 3aw5_A 396 TDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHN 433 (448)
T ss_dssp GGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESS
T ss_pred cccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCC
Confidence 367999999999999997664 2 33 5555553
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=8.3e-08 Score=77.12 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=58.5
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|++|.|+ |.+...|.+++++..+. .+ .. ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~------~~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ES------AP------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SC------HH------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----cc------cc------cccccceecCCCCEEEEEe--CCCeEE
Confidence 3678999998886 66667899999865441 00 00 0014777888999888866 899999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||+ .|.++||...+.|
T Consensus 79 ~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp EEECS--STTTTTCEEEEEE
T ss_pred EEEcc--ChhhcCCEEEEEE
Confidence 99999 6999999999987
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.52 E-value=2.9e-07 Score=76.01 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=58.2
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|++.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46789999999999999866555444311 125678999999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.||||+..|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999766544 888888853
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.51 E-value=9.4e-08 Score=77.32 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=50.1
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 96 (491)
||+|++.++|.-..++++...+... ...+.||++.+|.|+. +++|+|.|+|..| ...||.|.|+|
T Consensus 35 G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~~H--~~~gM~G~i~V 99 (100)
T 4hci_A 35 NESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICRYH--LLKGMEGKVIV 99 (100)
T ss_dssp TSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECTTT--GGGTCEEEEEE
T ss_pred CCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECccc--cCCCCEEEEEE
Confidence 4666777999866666665555421 1237899999999998 6899999999754 45799999999
Q ss_pred e
Q 011178 97 A 97 (491)
Q Consensus 97 ~ 97 (491)
+
T Consensus 100 e 100 (100)
T 4hci_A 100 K 100 (100)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.50 E-value=6.7e-08 Score=77.81 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=47.1
Q ss_pred EEecCCCCCeeeecccCCCCCCCCCCC--CCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 24 VLNFIYMAPLITLNGVQQRRNSWQDGV--YGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 24 ~~N~l~~~~siH~HG~~~~~~~~~DG~--~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++|.-..++++|+|+...+.. .|.. ......+.||+++++.|+ ++|+|+|||+. +...||.|.|+|+
T Consensus 30 ~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~--H~~~gM~G~i~V~ 98 (98)
T 2plt_A 30 FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGG--GGGGTCEEEEEEC
T ss_pred EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCC--ccccCCeEEEEEC
Confidence 578877789999998643211 1110 011234789999999874 79999999993 4556999999984
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.49 E-value=4.3e-07 Score=78.24 Aligned_cols=86 Identities=16% Similarity=0.185 Sum_probs=59.3
Q ss_pred CeEEE--eeeEEEEEEe--cCCCCCeeeecccC------------CC-CCCC---CC--CCCCCCCCCCCCCeEEEEEEe
Q 011178 12 CSLIT--HLYTHLVVLN--FIYMAPLITLNGVQ------------QR-RNSW---QD--GVYGTNCPIPPGKNFTYVLQV 69 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N--~l~~~~siH~HG~~------------~~-~~~~---~D--G~~~~q~~i~PG~~~~Y~f~~ 69 (491)
++|+| |++|+++++| ....+++++.+... .. ...+ .| .+......|.||++.++.|++
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~~ 112 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRT 112 (140)
T ss_dssp SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEEC
T ss_pred CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEEe
Confidence 34444 5778888999 66677888877320 00 0000 01 111112458999999999999
Q ss_pred CCCccceeEeCCccccccCCceeEEEEec
Q 011178 70 KDQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 70 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
+.+|+|||||+...+...||.|.|+|.+
T Consensus 113 -~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 113 -PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp -CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred -CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 5899999999987778889999999974
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=3.3e-06 Score=88.85 Aligned_cols=205 Identities=12% Similarity=0.016 Sum_probs=120.4
Q ss_pred eeEEEEEEecCCC-CCeeeecc---------cCCCCCCCCCCCC----C--CCCCCCCCCeEEEEEEeCCCcc-ceeEeC
Q 011178 18 LYTHLVVLNFIYM-APLITLNG---------VQQRRNSWQDGVY----G--TNCPIPPGKNFTYVLQVKDQIG-SYFYFP 80 (491)
Q Consensus 18 d~v~i~~~N~l~~-~~siH~HG---------~~~~~~~~~DG~~----~--~q~~i~PG~~~~Y~f~~~~~~G-t~wYH~ 80 (491)
.++++||.|.... ...++++| +.+. ..||.. . ....|.|||+++..+++++.+| +||..+
T Consensus 219 ~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI---a~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~ 295 (534)
T 3abg_A 219 RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI---ASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRN 295 (534)
T ss_dssp SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE---EETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEEC
T ss_pred cEEEEEEEecCCcceEEEEEecccCcCCCccEEEE---EeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEe
Confidence 3689999999764 45788876 2222 268752 2 3456999999999999965478 688765
Q ss_pred Ccccccc-------CCceeEEEEecCCCCCCCCCCCCCcceEEeeecc-cCCHHHHHHHHhcCCCCCCCceEEEcCcCCC
Q 011178 81 SLAFHKA-------AGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWY-KKNHTDLKAILDSGSDLPFPDGLVINGRGSN 152 (491)
Q Consensus 81 H~~~q~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~~ 152 (491)
....... ....+.+-+........+- ....+..|.... ..........+.-+ .....++|||+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~~---~~~~~w~iNG~~f~ 369 (534)
T 3abg_A 296 LGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRFG---RTGPTWTINGVAFA 369 (534)
T ss_dssp CCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEECS---CCCSTTCCCCBTTB
T ss_pred ccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEEe---ccCceeEECCcccC
Confidence 3210000 0011222222111100000 000000000000 00000000000000 01124678998862
Q ss_pred c---c-eEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEe-cCcc---CCC---CccCeEEEcCCceEEEEEE-eCC
Q 011178 153 A---N-TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV-EGTH---TLQ---NTYDSLDIHLGQSYSVLVR-ADQ 220 (491)
Q Consensus 153 ~---~-~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~-DG~~---~~p---~~~~~l~l~pGeR~dv~v~-~~~ 220 (491)
. + .+.++.|++++|.|.|.+....+.||||||.|+|++. +|.. ..+ ...|++.+.||+++.|.+. ++
T Consensus 370 ~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~ad- 448 (534)
T 3abg_A 370 DVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAP- 448 (534)
T ss_dssp CTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCS-
T ss_pred CCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECC-
Confidence 1 2 4679999999999999986568999999999999998 6631 112 3469999999999999998 55
Q ss_pred CCcceEEEEEee
Q 011178 221 PPQGYYIVISTR 232 (491)
Q Consensus 221 ~~g~~~i~~~~~ 232 (491)
.+|.|.+.++..
T Consensus 449 npG~w~~HCHil 460 (534)
T 3abg_A 449 FPGVYMFHCHNL 460 (534)
T ss_dssp CCEEEEEEESCH
T ss_pred CCccEEEecChH
Confidence 789998888764
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.46 E-value=5.9e-07 Score=72.35 Aligned_cols=82 Identities=11% Similarity=0.019 Sum_probs=59.7
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|.| .|.+...|.+|+++..|. .+ ++. ... ...+|++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~~--~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TKI--SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----ccc--cccccceeeCCCCEEEEEe--CCCcE
Confidence 3468899999887 577777899999975441 01 000 000 0125667888999888876 58999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||+ .|.++||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCEEEEEE
Confidence 999999 5999999999987
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=98.45 E-value=1.8e-06 Score=90.67 Aligned_cols=235 Identities=14% Similarity=0.084 Sum_probs=132.0
Q ss_pred CceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCC---------------------eEeEEEeCceeEEEEecCccCCCC
Q 011178 141 PDGLVINGRGSNANTFTVDQGKTYRFRISNVGIST---------------------SINFRIQGHKMLLVEVEGTHTLQN 199 (491)
Q Consensus 141 ~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~---------------------~~~~~i~~~~~~via~DG~~~~p~ 199 (491)
-..+++||+.. .|+|++++|+++++++.|.-... ...+|.+|.... -+.||.+-.+.
T Consensus 46 ~~~~~~NG~~P-GPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~-~~~DG~p~~~i 123 (513)
T 2wsd_A 46 TRLWGYNGLFP-GPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP-DDSDGYPEAWF 123 (513)
T ss_dssp EEEEEETTBSS-CCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC-GGGSCCTTSCB
T ss_pred ceEEEECCCcc-CceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC-CccCCCCcccc
Confidence 35789999864 79999999999999999998541 566788776433 24588753211
Q ss_pred ccCeEEEcCC---ceEEEEEEeCCCCcceEEEEEeecc--CC-CcceEEEEEecCCCCCCCCCCCCCCCccc-----cch
Q 011178 200 TYDSLDIHLG---QSYSVLVRADQPPQGYYIVISTRFT--SQ-VLSATSVLHYSNSAGSVSGPPPGGPTTQI-----DWS 268 (491)
Q Consensus 200 ~~~~l~l~pG---eR~dv~v~~~~~~g~~~i~~~~~~~--~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~-----~~~ 268 (491)
..=.|.|| +++...+++++.+|+||...+.... .+ .....|.|...+... ....+|. ...+. ||.
T Consensus 124 --~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~-~~~~lp~-~d~d~~l~l~D~~ 199 (513)
T 2wsd_A 124 --SKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE-KRLKLPS-DEYDVPLLITDRT 199 (513)
T ss_dssp --CGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG-GGGCCCC-GGGEEEEEEEEEE
T ss_pred --cCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccc-ccccCCC-CCCcEEEEEEeee
Confidence 11134567 5558888887678999998876321 01 112344444333211 0111111 00111 111
Q ss_pred hhhhhhhccCCCCCCCCCCCCCCCCccccccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCC
Q 011178 269 LEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGS 348 (491)
Q Consensus 269 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~ 348 (491)
......+..... . ..+..... ............+.|||+.+ |
T Consensus 200 ~~~~~~~~~~~~---~-~~~~~~~~------------~~~~~~~~~~d~~liNG~~~-----p----------------- 241 (513)
T 2wsd_A 200 INEDGSLFYPSA---P-ENPSPSLP------------NPSIVPAFCGETILVNGKVW-----P----------------- 241 (513)
T ss_dssp ECTTSCEECCSS---C-SSCCTTSC------------SSCCCSCCCCSEEEETTEES-----C-----------------
T ss_pred cCCCCceecccc---c-cccccccc------------ccccccccccceEEECCccc-----c-----------------
Confidence 110000000000 0 00000000 00000000113456777654 1
Q ss_pred CCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCCC-CCceeccCC-CeEEEeeccCCCCCCCCCCcccCCCCceeeEEeC
Q 011178 349 IPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT-LQSWHIDGH-NFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVY 426 (491)
Q Consensus 349 ~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~-~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~ 426 (491)
.+.++. ++++|+|.|.+.. .+-|||.|| .|.|++..++. +..|...|++.|.
T Consensus 242 ---------------~~~v~~-~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~----------~~~P~~~~~l~l~ 295 (513)
T 2wsd_A 242 ---------------YLEVEP-RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGL----------LPRSVKLNSFSLA 295 (513)
T ss_dssp ---------------EEECCS-SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE----------EEEEEEESEEEEC
T ss_pred ---------------eEEecC-CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCc----------ccCceEeCeEEEC
Confidence 134454 4799999999865 489999999 99999996431 1235567999999
Q ss_pred CCCEEEEEEEccC-cceeee
Q 011178 427 PKSWTAVYVPLDN-VGMWNI 445 (491)
Q Consensus 427 p~~~~~irf~adn-pG~w~~ 445 (491)
+|+.+.|.+.++. +|.|+.
T Consensus 296 pgeR~dvlv~~~~~~g~~~~ 315 (513)
T 2wsd_A 296 PAERYDIIIDFTAYEGESII 315 (513)
T ss_dssp TTCEEEEEEECGGGTTCEEE
T ss_pred CeeeEEEEEECCCCCCcEEE
Confidence 9999999999865 788654
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.44 E-value=7.1e-08 Score=77.67 Aligned_cols=68 Identities=18% Similarity=0.243 Sum_probs=45.8
Q ss_pred EEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 24 ~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++|.-..++++|.++...++. ..++.......+.||+++++.| +++|+|+|||+ .+...||.|.|+|+
T Consensus 31 ~~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 31 WVNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 557766778888887532100 0000001123478999999988 47999999999 45567999999985
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.42 E-value=2.9e-07 Score=72.86 Aligned_cols=66 Identities=18% Similarity=0.304 Sum_probs=45.6
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 96 (491)
||+|+ ++|.-..+++++.++.. ++. .....+.||+++++.| +++|+|||||+.+ ...||.|.|+|
T Consensus 26 Gd~V~--~~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H--~~~gM~g~i~V 90 (91)
T 1bxv_A 26 GDTVQ--WVNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCEPH--RGAGMVGKIVV 90 (91)
T ss_dssp TCEEE--EEECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECTTT--GGGTCEEEEEE
T ss_pred CCEEE--EEECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeCCC--ccCCCEEEEEE
Confidence 45443 55776677888887621 110 1123478999998877 4799999999943 44599999998
Q ss_pred e
Q 011178 97 A 97 (491)
Q Consensus 97 ~ 97 (491)
+
T Consensus 91 ~ 91 (91)
T 1bxv_A 91 Q 91 (91)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.41 E-value=8.7e-07 Score=71.54 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=59.2
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|++.|.+...|-|.+.+.. -...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~---------------------------~~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLG---------------------------IDVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGT---------------------------EEEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCC---------------------------cceeecCCcceeEEEecccCceE
Confidence 367899999999999998777777664322 12346789999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEe
Q 011178 444 NIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|+|.. |...||...+.|.
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999985 9999999999873
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.35 E-value=7e-07 Score=72.33 Aligned_cols=84 Identities=10% Similarity=-0.048 Sum_probs=58.1
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCc-eeeEEeCCCCEEEEEEEccCcc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTIS-RCTVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~-rDTv~v~p~~~~~irf~adnpG 441 (491)
..++++.|++|.|+ |.+...|.++++.-... .+.+... . ..+.+ .+++.+.||+...+.| +.||
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~-----~-~~~~~~~~~~~~~pG~~~~~tf--~~~G 81 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASE-----L-KAASMDENDLLSEDEPSFKAKV--STPG 81 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHH-----H-HHTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccch-----h-hcccccccceecCCCCEEEEEe--CCCe
Confidence 34788999999876 77767899998731100 0000000 0 00112 3677788999888866 8999
Q ss_pred eeeeeecchhhhhcceEEEEEE
Q 011178 442 MWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V 463 (491)
.|.|||+ .|.++||...+.|
T Consensus 82 ~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 82 TYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp EEEEECS--TTGGGTCEEEEEE
T ss_pred EEEEEeC--CCcccCCeEEEEE
Confidence 9999999 6999999999987
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.35 E-value=7.9e-07 Score=74.47 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=32.2
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
+.||++|+|.| +.+|+|||+|-. +...||.|.|+|.++
T Consensus 58 ~~pg~t~s~TF---~~pG~y~y~C~~--H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 58 SKINESYTLTV---TEPGLYGVKCTP--HFGMGMVGLVQVGDA 95 (123)
T ss_dssp CCTTCCEEEEE---CSCEEEEEECGG--GTTTTCEEEEEESSS
T ss_pred cCCCCEEEEEe---CCCeEEEEEeCC--CCcCCcEEEEEECCC
Confidence 57999998888 479999999984 456799999999873
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=5.4e-07 Score=72.28 Aligned_cols=65 Identities=20% Similarity=0.315 Sum_probs=45.9
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCC---CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVY---GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~---~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|.-..+++++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .+...||.|.|+|+
T Consensus 30 ~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 30 EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 4668755678888887542 11211 1123478999999887 47999999999 44556999999985
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=98.34 E-value=1.2e-06 Score=90.79 Aligned_cols=89 Identities=22% Similarity=0.334 Sum_probs=74.6
Q ss_pred eEEEcCcCCC--cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC---CccCeEEEcCCceEEEEEE
Q 011178 143 GLVINGRGSN--ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ---NTYDSLDIHLGQSYSVLVR 217 (491)
Q Consensus 143 ~~~vNG~~~~--~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p---~~~~~l~l~pGeR~dv~v~ 217 (491)
.++|||+.++ .+.++++.|+++||+|+|.+....+.|||+++.|+|++.||....+ ...|++.|. |+++.|+++
T Consensus 379 ~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~ 457 (488)
T 3od3_A 379 ANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVK 457 (488)
T ss_dssp CEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEEC
T ss_pred eeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEE
Confidence 3799999863 4668999999999999999866689999999999999999987644 357999999 999999999
Q ss_pred eCC---CCcceEEEEEee
Q 011178 218 ADQ---PPQGYYIVISTR 232 (491)
Q Consensus 218 ~~~---~~g~~~i~~~~~ 232 (491)
+++ .+|.|-+.++..
T Consensus 458 f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 458 FNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp BCSCCCGGGCEEEEESSH
T ss_pred eccCCCCCCCEEEeCCch
Confidence 974 246777776643
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.32 E-value=8.8e-07 Score=71.73 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=31.8
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.+.||+++++.| +++|+|+|||+ .+...||.|.|+|+
T Consensus 66 ~~~pG~~~~~tf---~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 66 LSEDEPSFKAKV---STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp BBTTBCEEEECC---CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 478999999987 47999999999 55667999999985
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.23 E-value=9.7e-07 Score=74.34 Aligned_cols=40 Identities=20% Similarity=0.237 Sum_probs=33.2
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecCC
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 100 (491)
-+.||++|+|.| +.+|+|||||-.| ...||.|.|+|.++.
T Consensus 59 ~s~pGet~s~TF---~~pG~y~y~C~~H--~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 59 KGKINEEITVTL---SKPGVYMYQCAPH--VGMGMIGAIVVGEPA 98 (127)
T ss_dssp BCCTTCCCEEEC---CSCEEEEEECTTT--GGGTCEEEEEESSCT
T ss_pred ecCCCCEEEEEe---CCCeEEEEEeCCC--CcCCcEEEEEECcCC
Confidence 357999988888 4799999999844 567999999999754
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.22 E-value=4.1e-06 Score=67.34 Aligned_cols=65 Identities=23% Similarity=0.299 Sum_probs=45.4
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCC-------CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEE
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVY-------GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIK 95 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~li 95 (491)
+++|.-..+++++.++... .+|.. .....+.||+++++.|+ ++|+|+|||+ .+...||.|.|+
T Consensus 28 ~~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~--~H~~~gM~G~i~ 97 (99)
T 1plc_A 28 VFKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS--PHQGAGMVGKVT 97 (99)
T ss_dssp EEEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG--GGTTTTCEEEEE
T ss_pred EEEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC--CCcccCCEEEEE
Confidence 3578866677887776432 12211 11234789999988773 7999999999 445579999999
Q ss_pred Ee
Q 011178 96 IA 97 (491)
Q Consensus 96 V~ 97 (491)
|+
T Consensus 98 V~ 99 (99)
T 1plc_A 98 VN 99 (99)
T ss_dssp EC
T ss_pred EC
Confidence 84
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.21 E-value=3.7e-06 Score=70.28 Aligned_cols=63 Identities=13% Similarity=0.066 Sum_probs=42.2
Q ss_pred EEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 24 VLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 24 ~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
++|.- .++++..+... +-+|.. ..-+.||++|+|.| +.+|+|||||-. +...||.|.|+|.++
T Consensus 34 f~n~~-~~Hnv~~~~~~-----~p~g~~--~~~~~pg~t~s~TF---~~~G~y~Y~C~~--H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 34 FVPTD-KSHNAESVREV-----WPEGVA--PVKGGFSKEVVFNA---EKEGLYVLKCAP--HYGMGMVVLVQVGKP 96 (124)
T ss_dssp EECSS-SSCCCEECTTT-----SCTTSC--CCBCCTTCCEEEEC---CSSEEEEEECTT--TGGGTCEEEEEESSC
T ss_pred EEECC-CCccEEEeCCc-----CCCCcc--ccccCCCCEEEEEe---CCCeEEEEEcCC--CCcCCCEEEEEECCC
Confidence 55553 46666655221 112321 23367999999888 479999999964 455799999999874
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.15 E-value=5.6e-06 Score=66.50 Aligned_cols=82 Identities=13% Similarity=0.027 Sum_probs=58.2
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|.| .|.+...|.++++...+- .+ .+. ... ...++.+.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~~-----~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VDA-----SKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-ccc-----ccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 3578899998887 677777899999865330 00 000 000 0123556788999888766 58999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|||+ .|..+||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CCcccCCEEEEEE
Confidence 999999 5999999999987
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.13 E-value=1.2e-05 Score=64.62 Aligned_cols=66 Identities=18% Similarity=0.290 Sum_probs=46.8
Q ss_pred EEEEecCCCCCeeeecccCCCCCCCCCCCC-------CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEE
Q 011178 22 LVVLNFIYMAPLITLNGVQQRRNSWQDGVY-------GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGI 94 (491)
Q Consensus 22 i~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l 94 (491)
|+++|.-..++++|.++... .+|.. .....+.||+++++.|+ ++|+|+|||+ .+...||.|.|
T Consensus 27 V~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~--~H~~~gM~G~i 96 (99)
T 1byp_A 27 ITFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA--PHAGAGMVGKV 96 (99)
T ss_dssp EEEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG--GGTTTTCEEEE
T ss_pred EEEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC--CccccCCEEEE
Confidence 34678866788888886432 12221 11234789999998874 7999999999 44556999999
Q ss_pred EEe
Q 011178 95 KIA 97 (491)
Q Consensus 95 iV~ 97 (491)
+|+
T Consensus 97 ~V~ 99 (99)
T 1byp_A 97 TVN 99 (99)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.10 E-value=7e-06 Score=69.75 Aligned_cols=61 Identities=15% Similarity=0.105 Sum_probs=43.1
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|....++++++... .+|... ....+.||++++|.| +++|+|+|+|-.|. ||.|.|+|+
T Consensus 71 ~~~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~----gM~G~I~V~ 132 (132)
T 3c75_A 71 YWVNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP----FMRGKVIVE 132 (132)
T ss_dssp EEEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT----TCEEEEEEC
T ss_pred EEEECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc----CCEEEEEEC
Confidence 35688666666666432 123222 334588999999888 47999999997653 999999985
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=98.03 E-value=7.8e-05 Score=79.98 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=72.3
Q ss_pred ceEEEcCcCC-CcceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC------------------------
Q 011178 142 DGLVINGRGS-NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT------------------------ 196 (491)
Q Consensus 142 ~~~~vNG~~~-~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~------------------------ 196 (491)
..+.+||+.+ ....+.++.|++++|.|+|.+.. .+.|||+||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 3577888764 34678899999999999999865 799999999999998765421
Q ss_pred ---CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 197 ---LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 197 ---~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
++...|++.+.+|+.+.|.+++...+|.|.+.++..
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 122368999999999999999655789888888764
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=98.00 E-value=1.4e-05 Score=65.07 Aligned_cols=71 Identities=10% Similarity=-0.012 Sum_probs=50.9
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|+|+ |.+...|-+|++... .|. . .+ +.-.+.||+...+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~------~-------~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE------A-------AL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------S-------CE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc------c-------cc-cccccCCCCEEEEEe--CCCEEE
Confidence 3678999998885 777778999987521 111 0 01 222367888776666 899999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 55 99998877
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=97.93 E-value=2e-05 Score=68.81 Aligned_cols=86 Identities=13% Similarity=0.025 Sum_probs=59.0
Q ss_pred EEeecCCcEEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCce---eeEEeCCCC--EEEEEEEc
Q 011178 364 VMAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISR---CTVQVYPKS--WTAVYVPL 437 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~r---DTv~v~p~~--~~~irf~a 437 (491)
.+.++.|+.|.+++.|.+ ...|-|-++. .+ ..+... ....+... -+..|.||+ ...+.|.+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~-------~~-~~~~~~-----~~~~~~~~~~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITK-------KG-PPYAVM-----PVIDPIVAGTGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEES-------CC-SCCCSS-----CCCCSEEEEBCCCCCCBTTBEEEEEEEECC
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEee-------cC-cchhcc-----ccccccccccccccccCCCCceEEEEEEEE
Confidence 478999999999999974 4445554442 11 111100 00000000 112567899 99999999
Q ss_pred cCcceeeeeecchhhhhcceEEEEEE
Q 011178 438 DNVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 438 dnpG~w~~HCHil~H~d~GMm~~~~V 463 (491)
.||.+.||||+--|...||-..+.|
T Consensus 129 -~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 129 -TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp -CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred -CCceEEEECCCCCHHHCCCEEEEEE
Confidence 9999999999999999999999987
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.89 E-value=1e-05 Score=64.89 Aligned_cols=65 Identities=17% Similarity=0.071 Sum_probs=42.9
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCC-----CCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVY-----GTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~-----~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++.|.-..++++....-. +-+|.- .....+.||+++++.| +++|+|+|+|-.| ...||.|.|+|+
T Consensus 29 ~~~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H--~~~gM~G~I~V~ 98 (98)
T 1iuz_A 29 EFVNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPH--AGAGMKMTITVQ 98 (98)
T ss_dssp EEEECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTT--GGGTCEEEEEEC
T ss_pred EEEECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhh--ccCCCEEEEEEC
Confidence 356775556666655421 112321 0112478999999887 4799999999864 445999999985
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=97.89 E-value=1.7e-05 Score=66.95 Aligned_cols=42 Identities=24% Similarity=0.263 Sum_probs=35.6
Q ss_pred CCCCCCeEEEEEEeC--CCccceeEeCCccccccCCceeEEEEec
Q 011178 56 PIPPGKNFTYVLQVK--DQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
.|.||+++++.|+++ .++|+|||.|-...+.. ||.|.|+|.+
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 489999999999984 37999999997665565 8999999974
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.89 E-value=3.2e-05 Score=81.38 Aligned_cols=75 Identities=9% Similarity=0.060 Sum_probs=60.6
Q ss_pred eEEeecCCcEEEEEEEcCCC---CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC
Q 011178 363 SVMAADFRGFAEVVFENPED---TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 439 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~---~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn 439 (491)
..+.++.|+.|+|++.|.+. ..|.|+++++.+ + ..+.||+...+.|.++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv-------------------------~--~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV-------------------------A--MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------------------E--EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCc-------------------------c--eeeCCCCeEEEEEECCC
Confidence 45789999999999999643 368888876432 1 46788999999999999
Q ss_pred cceeeeeecc---hhhhhcceEEEEEEecC
Q 011178 440 VGMWNIRSEN---WARQYLGQQFYLRVYSS 466 (491)
Q Consensus 440 pG~w~~HCHi---l~H~d~GMm~~~~V~~~ 466 (491)
||.|.||||. ..|. ||...+.|.++
T Consensus 566 pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999993 4564 99999998754
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=2.6e-05 Score=63.49 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=30.0
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.+.||+++++.| +.+|+|+|+|-.|. ||.|.|+|+
T Consensus 72 ~l~~g~~~~~tf---~~~G~y~~~C~~H~----~M~G~I~V~ 106 (106)
T 1id2_A 72 MMTKDQAYAITF---NEAGSYDYFCTPHP----FMRGKVIVE 106 (106)
T ss_dssp CBCTTEEEEEEE---CSCEEEEEECSSCT----TCEEEEEEC
T ss_pred ccCCCCEEEEEe---CCCEEEEEEeCCCC----CCEEEEEEC
Confidence 478999999888 47999999998753 999999985
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=3.7e-05 Score=64.29 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=31.2
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
..||++++|.| +.+|+|||+|.. +...||.|.|+|.++
T Consensus 58 ~~pG~t~~~tF---~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 58 SKINENYVLTV---TQPGAYLVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp CCTTCCEEEEC---CSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred cCCCCEEEEEe---CCCEEEEEEeCC--cccCCCEEEEEEcCC
Confidence 46999988877 479999999974 445799999999874
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.5e-05 Score=64.44 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=31.6
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
+.||++++|.| +.+|+|+|+|.. +...||.|.|+|.++
T Consensus 58 ~~pG~t~~~tF---~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVVKF---DKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEEEC---CSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred cCCCCEEEEEe---CCCeEEEEEeCC--ccccCCEEEEEEcCC
Confidence 57999988887 479999999974 445799999999874
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.8e-05 Score=69.60 Aligned_cols=43 Identities=19% Similarity=0.140 Sum_probs=35.6
Q ss_pred CCCCCCCeEEEEEEeC-CCccceeEeCCccccccCCceeEEEEec
Q 011178 55 CPIPPGKNFTYVLQVK-DQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 55 ~~i~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
..|.||+++++.|+++ -++|+|||+|-...+.. ||.|-|+|.+
T Consensus 124 ~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 124 KLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred eeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 3489999999999984 26999999997655555 8999999974
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=97.62 E-value=8.7e-05 Score=62.49 Aligned_cols=42 Identities=31% Similarity=0.329 Sum_probs=33.8
Q ss_pred CCCCCCeEEEEEEeC-CCccc-eeEeCCccccccCCceeEEEEec
Q 011178 56 PIPPGKNFTYVLQVK-DQIGS-YFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
.|.||++++..|+++ -.+|+ |||.|-...+.. ||.|.|+|.+
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 489999999999984 14655 999997665665 8999999963
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00012 Score=61.57 Aligned_cols=42 Identities=26% Similarity=0.277 Sum_probs=34.5
Q ss_pred CCCCCCeEEEEEEeC-CCccc-eeEeCCccccccCCceeEEEEec
Q 011178 56 PIPPGKNFTYVLQVK-DQIGS-YFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
.|.||+++++.|+++ -++|+ |+|.|-...+.. ||.|.|+|.+
T Consensus 85 ~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 85 VIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp CBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 489999999999984 15885 999998765665 8999999963
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00014 Score=60.76 Aligned_cols=37 Identities=11% Similarity=0.048 Sum_probs=30.7
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
-+.||++++|.| +++|+|||+|-.|.. |.|.|+|.+.
T Consensus 57 ~~~~g~t~~~tF---~~~G~y~y~C~~H~~----M~G~I~V~~~ 93 (122)
T 2ux6_A 57 KSKINENYKVTF---TAPGVYGVKCTPHPF----MVGVVQVGDA 93 (122)
T ss_dssp BCCTTCCEEEEE---CSCEEEEEEETTEEE----EEEEEEESSS
T ss_pred ecCCCCEEEEEe---CCCEEEEEEeCCCcc----CEEEEEEeCC
Confidence 357999998888 479999999987533 9999999874
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00066 Score=56.98 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=33.8
Q ss_pred CCCCCCeEEEEEEeC-CCccc-eeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVK-DQIGS-YFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.|.||+++++.|+++ -.+|+ |||.|-...+.. ||.|-|+|.
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 489999999999984 14776 999998766666 899999984
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00026 Score=59.06 Aligned_cols=75 Identities=8% Similarity=0.077 Sum_probs=52.3
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|+..+ ..|-+..+.. .+.. . .+.+.+.+|+...+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p~-g-----------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---KSHNAESVRE----------VWPE-G-----------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECSS---SSCCCEECTT----------TSCT-T-----------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEEECC---CCccEEEeCC----------cCCC-C-----------ccccccCCCCEEEEEe--CCCeEE
Confidence 4678999999998554 5676665421 1110 0 0222345777766665 899999
Q ss_pred eeeecchhhhhcceEEEEEEecCC
Q 011178 444 NIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
.|||- .|..+||...+.|.+|.
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEcC--CCCcCCCEEEEEECCCC
Confidence 99997 59999999999998764
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00023 Score=73.56 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=49.3
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc-ccccCCceeEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-FHKAAGGYGGIK 95 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~Gl~G~li 95 (491)
|++|++.++|.....-.+ ||+.++. -|+ ..-+.||++.++.|++ +++|+|||+|..- .....+|.|.|+
T Consensus 565 GdtVrfiLTN~D~veDVi--HSF~IPs----lGI---K~DaiPGrtnsvtFta-dkPGvY~y~CSE~CGa~Hs~M~G~Vi 634 (638)
T 3sbq_A 565 GDEVTVTITNIDQIEDVS--HGFVVVN----HGV---SMEISPQQTSSITFVA-DKPGLHWYYCSWFCHALHMEMVGRMM 634 (638)
T ss_dssp TCEEEEEEEECCCSTTCC--EEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEEEECCSCCSTTCTTCEEEEE
T ss_pred CceeEEEEecCCcCCCce--eeeEecC----CCc---eeeeCCCCeEEEEEEc-CCCEEEEEECCCcCCCCcccceEEEE
Confidence 577888899964322233 3333211 111 1237899999999999 6999999999853 222357999999
Q ss_pred EecC
Q 011178 96 IASR 99 (491)
Q Consensus 96 V~~~ 99 (491)
|+++
T Consensus 635 VEPa 638 (638)
T 3sbq_A 635 VEPA 638 (638)
T ss_dssp EECC
T ss_pred EecC
Confidence 9863
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00031 Score=58.89 Aligned_cols=74 Identities=12% Similarity=-0.022 Sum_probs=50.1
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|++.|. .|-+..+.. .+ ++.. ..+.+.||+...+.| +.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~TF--~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVTL--SKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 46889999999987763 455544321 01 1100 112234677655555 899999
Q ss_pred eeeecchhhhhcceEEEEEEecC
Q 011178 444 NIRSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~~ 466 (491)
.|||-. |..+||...+.|.++
T Consensus 77 ~y~C~~--H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 77 MYQCAP--HVGMGMIGAIVVGEP 97 (127)
T ss_dssp EEECTT--TGGGTCEEEEEESSC
T ss_pred EEEeCC--CCcCCcEEEEEECcC
Confidence 999994 999999999999865
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00093 Score=53.21 Aligned_cols=80 Identities=16% Similarity=0.089 Sum_probs=55.1
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|+.|.|+ |.+...|-+.+.... +. + ..+. ...-.+...+.+|+...+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~~----------~p-~---g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDEDA----------VP-A---GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTTS----------SC-T---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCCC----------Cc-c---cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 35788999999886 666667876655311 10 0 0000 00113456788999888766 79999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
+.|+|-+ |..+||-..+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999987 999999999887
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00062 Score=55.19 Aligned_cols=71 Identities=11% Similarity=-0.089 Sum_probs=49.6
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|+ |.+...|-+++.... .+. . ..++-.+.+|+...+.| +.||.+
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~~------~--------~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE------D--------AFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------S--------CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CCc------c--------cccccccCCCCEEEEEe--CCCEEE
Confidence 3678999999887 776667877664321 000 0 01333467888777776 799999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999988 65 99999887
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00073 Score=56.30 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=51.1
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|++.|. .|-+.++.. .+ ++.. +.+.+.|++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 47889999999998873 355554321 11 0000 112235777777666 899999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.|+|- .|...||-..+.|.+
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESS
T ss_pred EEEeC--CCCcCCcEEEEEECC
Confidence 99999 599999999999986
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00086 Score=56.69 Aligned_cols=71 Identities=11% Similarity=-0.070 Sum_probs=50.5
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.|+ |.+...|-+++.... .|. . .-++-.+.+|+...+.| +.||.+
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 4678999999886 777677877764321 000 0 11333567888877776 789999
Q ss_pred eeeecchhhhhcceEEEEEE
Q 011178 444 NIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V 463 (491)
.|||-+ |. ||...+.|
T Consensus 116 ~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--Cc--CCEEEEEE
Confidence 999987 66 99999887
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0092 Score=49.58 Aligned_cols=73 Identities=7% Similarity=-0.022 Sum_probs=47.7
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.++++.|++|.|+..+. .|-+.++- +.. ++... .+.+.+|+...+. ++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~-----------~~~~~pG~t~~~t--F~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAE-----------KFKSKINENYVLT--VTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCC-----------CCBCCTTCCEEEE--CCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCcc-----------ceecCCCCEEEEE--eCCCEEE
Confidence 46789999998876653 35554431 100 11000 1123467765554 4889999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.|+|-. |...||...+.|.+
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGD 94 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESS
T ss_pred EEEeCC--cccCCCEEEEEEcC
Confidence 999984 99999999999976
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0057 Score=50.83 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=30.5
Q ss_pred eCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEec
Q 011178 425 VYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 425 v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 465 (491)
+.+|+...+.| +.||.|.|+|-. |...||...+.|.+
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~~--H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCAP--HYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECST--TTTTTCEEEEEESS
T ss_pred cCCCCEEEEEe--CCCeEEEEEeCC--ccccCCEEEEEEcC
Confidence 35777655555 789999999985 99999999999975
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.01 Score=61.51 Aligned_cols=75 Identities=11% Similarity=0.122 Sum_probs=59.2
Q ss_pred eEEeecCCcEEEEEEEcCC---CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC
Q 011178 363 SVMAADFRGFAEVVFENPE---DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN 439 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn 439 (491)
..+.++.|+.|+|++.|.+ +..|-|-+.+... -+.+.||....+.|.++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 4577999999999999974 4667776654321 125678999999999999
Q ss_pred cceeeeeecchhhh-hcceEEEEEEe
Q 011178 440 VGMWNIRSENWARQ-YLGQQFYLRVY 464 (491)
Q Consensus 440 pG~w~~HCHil~H~-d~GMm~~~~V~ 464 (491)
||.|.++|...-|. +.+|...+.|.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 99999999986664 57899999775
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=96.27 E-value=0.025 Score=46.76 Aligned_cols=38 Identities=18% Similarity=0.326 Sum_probs=30.6
Q ss_pred CCCCCCeEEEEEEeC--CCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVK--DQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.|.||++++..|+.+ .++|+|.|-|- .+. ||.|.|+|.
T Consensus 86 ~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 86 LIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp CBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred eeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 489999999999985 27999999999 344 899999984
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.012 Score=51.38 Aligned_cols=90 Identities=3% Similarity=-0.078 Sum_probs=60.8
Q ss_pred Eee-cCCcEEEEEEEcCCCCC-----CceeccCCCeEEEeeccCCCCCC-------CCCCccc--CCCCceeeEEeCCCC
Q 011178 365 MAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGGEWTPA-------SRLTYNL--RDTISRCTVQVYPKS 429 (491)
Q Consensus 365 ~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~g~~~~~-------~~~~~~~--~~p~~rDTv~v~p~~ 429 (491)
+++ +.|+.|.|+|.|.+..+ |- |-|...+. ++.. ....|-. .......|..|.||+
T Consensus 60 itV~kaG~~Vtv~~~N~g~~p~~~m~Hn-------~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGe 130 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQPKASMGHN-------LVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGE 130 (167)
T ss_dssp EEEETTCSSEEEEEEECSCSCHHHHCBC-------CEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEecCCCEEEEEEEECCCCccccccce-------EEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCCCC
Confidence 688 89999999999998653 44 33332210 0000 0000000 011234567789999
Q ss_pred EEEEEEEcc--CcceeeeeecchhhhhcceEEEEEEe
Q 011178 430 WTAVYVPLD--NVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 430 ~~~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
...|.|.++ .||.+-|+|-+--|.. ||-..+.|.
T Consensus 131 t~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 131 ESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred EEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 999999987 8999999999988888 899999885
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.05 Score=45.45 Aligned_cols=87 Identities=9% Similarity=-0.003 Sum_probs=61.0
Q ss_pred EEeecCC-cEEEEEEEcCCCCC-----CceeccCCCeEEEeecc-----------C---CCCCCCCCCcccCCCCceeeE
Q 011178 364 VMAADFR-GFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDG-----------G---EWTPASRLTYNLRDTISRCTV 423 (491)
Q Consensus 364 ~~~~~~g-~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~~~~~p~~rDTv 423 (491)
.++++.| +.|.+++.|.+..+ |- |-|...+. + .|-+.. .......|.
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~~~~~~~~~m~~~~~~~~v~~~------~~~~~~~t~ 85 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSADVGDVAKEGAHAGADNNFVTPG------DKRVIAFTP 85 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGGHHHHHHHHHTTCGGGTTSCTT------CTTCSEECC
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcchhhhHHHhhhccccccccccc------cccceeeee
Confidence 4788999 99999999997543 54 33333221 0 010000 001233566
Q ss_pred EeCCCCEEEEEEEcc---CcceeeeeecchhhhhcceEEEEEEe
Q 011178 424 QVYPKSWTAVYVPLD---NVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 424 ~v~p~~~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|.||+...+.|.++ .||.+-|.|-+--|.. ||-..+.|.
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 789999999999997 8999999999888888 899999885
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.016 Score=48.96 Aligned_cols=69 Identities=13% Similarity=0.128 Sum_probs=44.9
Q ss_pred EeeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc-ccccCCceeEE
Q 011178 16 THLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-FHKAAGGYGGI 94 (491)
Q Consensus 16 v~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~Gl~G~l 94 (491)
.|++|++.++|. +. .|++..+. -|. ..-+.||+.-++.|++ +++|+|+|+|..- .....+|.|-+
T Consensus 66 ~G~~V~~~vts~-DV-----~Hsf~ip~----~~~---k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~~M~g~v 131 (135)
T 2cua_A 66 QGAEIVFKITSP-DV-----IHGFHVEG----TNI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQNMFGTI 131 (135)
T ss_dssp TTSEEEEEEEBS-SS-----CEEEEETT----SSC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTSTTCEEEE
T ss_pred CCCEEEEEEEeC-Cc-----cceEEecC----CCc---eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcCCCEEEE
Confidence 356777778876 22 34554321 111 1236799999999998 6999999999531 11225899999
Q ss_pred EEec
Q 011178 95 KIAS 98 (491)
Q Consensus 95 iV~~ 98 (491)
+|.+
T Consensus 132 ~V~~ 135 (135)
T 2cua_A 132 VVKE 135 (135)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9864
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.034 Score=46.89 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=51.2
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~ 444 (491)
+.++.|+.|+|++.|.+ ..|- |.|-+. + --+.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~-------------~-------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGT-------------N-------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTS-------------S-------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCC-------------C-------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 57889999999999975 4343 433111 1 013456788889999999999999
Q ss_pred eeecc---hhhhhcceEEEEEEe
Q 011178 445 IRSEN---WARQYLGQQFYLRVY 464 (491)
Q Consensus 445 ~HCHi---l~H~d~GMm~~~~V~ 464 (491)
++|.. ..| .+|-..++|.
T Consensus 114 ~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTS--TTCEEEEEEE
T ss_pred EECcccCCCCc--CCCEEEEEEE
Confidence 99976 345 5888888875
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.028 Score=46.50 Aligned_cols=71 Identities=6% Similarity=-0.024 Sum_probs=46.0
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|++|.|+.. +. .|-+++.. +.+.. .. ..+.+.+|+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~n~--d~-~H~v~~~~----------~~~p~-~~-----------~~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPT--DK-GHNVETIK----------GMIPD-GA-----------EAFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEEES--SS-SCCCEECT----------TCSCT-TC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEEC--CC-CcEEEEcc----------cccCC-Cc-----------ceeecCCCCEEEEEe--CCCEEE
Confidence 467899999988744 32 46665543 11110 00 011234677766666 789999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.|+|-+ |.. |...+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999987 655 999999976
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=95.13 E-value=0.081 Score=44.09 Aligned_cols=91 Identities=5% Similarity=-0.096 Sum_probs=60.3
Q ss_pred EEee-cCCcEEEEEEEcCCCCC-----CceeccCCCeEEEeeccCCCCC--------CCCCCccc-CC-CCceeeEEeCC
Q 011178 364 VMAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGGEWTP--------ASRLTYNL-RD-TISRCTVQVYP 427 (491)
Q Consensus 364 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~g~~~~--------~~~~~~~~-~~-p~~rDTv~v~p 427 (491)
.+++ +.|+.|.+++.|.+..+ |-|-| ...+ .... .....|-. .+ .....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE-------cccc--chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 3678 88999999999998653 65433 2211 0000 00000000 01 12345667899
Q ss_pred CCEEEEEEEcc--Ccce-eeeeecchhhhhcceEEEEEEe
Q 011178 428 KSWTAVYVPLD--NVGM-WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 428 ~~~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|+...+.|.+. .+|. +-|.|-+--|.. ||-..+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999988888 899999885
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=94.95 E-value=0.047 Score=47.72 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=33.4
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCc-cccccCCceeEEEEec
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSL-AFHKAAGGYGGIKIAS 98 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~Gl~G~liV~~ 98 (491)
+.||+.-+..|++ +++|+|++.|.. -.....+|.|-++|++
T Consensus 127 a~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 127 VLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp ECTTBCEEEEEEC-CSCEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred ecCCceeEEEEEe-CCCEEEEEECCcCCCCCcCCCEEEEEEeC
Confidence 6799999999999 699999999983 2334467999999974
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=94.78 E-value=0.12 Score=43.07 Aligned_cols=91 Identities=7% Similarity=-0.117 Sum_probs=60.0
Q ss_pred EEee-cCCcEEEEEEEcCCCCC-----CceeccCCCeEEEeeccCCCCCC--------CCCCccc-CC-CCceeeEEeCC
Q 011178 364 VMAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGGEWTPA--------SRLTYNL-RD-TISRCTVQVYP 427 (491)
Q Consensus 364 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~g~~~~~--------~~~~~~~-~~-p~~rDTv~v~p 427 (491)
.+++ +.|+.|.+++.|.+..+ |-|- +...+. .... ....|-. .+ .....|..|.|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~v-------i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLV-------LTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCE-------EEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEE-------EcCccc--hhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 3788 88999999999998653 5433 332210 0000 0000000 01 12335667899
Q ss_pred CCEEEEEEEcc--Ccce-eeeeecchhhhhcceEEEEEEe
Q 011178 428 KSWTAVYVPLD--NVGM-WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 428 ~~~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|+...+-|.++ .||. +-|.|-+--|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7876 999999888888 899999885
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=94.58 E-value=0.15 Score=44.56 Aligned_cols=73 Identities=16% Similarity=0.217 Sum_probs=54.9
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~ 444 (491)
+.++.|+.|++.+.|. +..|-|-+=... =-+.+-||....+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------------------------ik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSS---------------------------CEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCC---------------------------eEEEecCCceeEEEEEeCCCEEEE
Confidence 5688999999999997 455665542111 113355788889999999999999
Q ss_pred eeecc-hhhhhcceEEEEEEec
Q 011178 445 IRSEN-WARQYLGQQFYLRVYS 465 (491)
Q Consensus 445 ~HCHi-l~H~d~GMm~~~~V~~ 465 (491)
+.|.. --+.+.+|...+.|.+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 99996 3456789999998853
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=94.15 E-value=0.24 Score=41.13 Aligned_cols=92 Identities=9% Similarity=-0.070 Sum_probs=59.5
Q ss_pred EEee-cCCcEEEEEEEcCCCCC-----CceeccCCCeEEEeeccC------CCCCCCCCCc-ccCC-CCceeeEEeCCCC
Q 011178 364 VMAA-DFRGFAEVVFENPEDTL-----QSWHIDGHNFFAVGMDGG------EWTPASRLTY-NLRD-TISRCTVQVYPKS 429 (491)
Q Consensus 364 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~g~g------~~~~~~~~~~-~~~~-p~~rDTv~v~p~~ 429 (491)
.+++ +.|+.|.+++.|.+..+ |-|-| ...+.- .........| ...+ .....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 3788 89999999999998553 65433 222100 0000000000 0001 1233555789999
Q ss_pred EEEEEEEcc--Ccce-eeeeecchhhhhcceEEEEEE
Q 011178 430 WTAVYVPLD--NVGM-WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 430 ~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V 463 (491)
...+.|.+. .||. +-|.|-+--|.. ||-..+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7887 999999988888 89998877
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=92.56 E-value=0.63 Score=38.29 Aligned_cols=92 Identities=12% Similarity=0.077 Sum_probs=58.1
Q ss_pred EEeecC-CcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCC---C----C-CCCcc--cCCCCceeeEEeCCCCEEE
Q 011178 364 VMAADF-RGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTP---A----S-RLTYN--LRDTISRCTVQVYPKSWTA 432 (491)
Q Consensus 364 ~~~~~~-g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~---~----~-~~~~~--~~~p~~rDTv~v~p~~~~~ 432 (491)
-++++. |+.|.++|.|.+..+ --.=||.| ||.... .... + . ...|- -.......|..|.||+...
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EEEEecCCCEEEEEEEECCccc--ccccCceE-EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 367875 999999999998542 00112344 444311 0000 0 0 00110 0123456788899999999
Q ss_pred EEEEcc---CcceeeeeecchhhhhcceEEEEEE
Q 011178 433 VYVPLD---NVGMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 433 irf~ad---npG~w~~HCHil~H~d~GMm~~~~V 463 (491)
|-|.+. .+|.+-|-|- -|. ||-..+.|
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 999987 8999999999 688 99999887
|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=88.43 E-value=4.1 Score=33.16 Aligned_cols=72 Identities=15% Similarity=0.376 Sum_probs=50.3
Q ss_pred CCCEE--EEEEEEcCCCCeEeEEEe-Cce--eEEEEecCccCC--------CCccCeEEEcCCceEEEEEEeCC--CCcc
Q 011178 160 QGKTY--RFRISNVGISTSINFRIQ-GHK--MLLVEVEGTHTL--------QNTYDSLDIHLGQSYSVLVRADQ--PPQG 224 (491)
Q Consensus 160 ~g~~~--rlR~iN~~~~~~~~~~i~-~~~--~~via~DG~~~~--------p~~~~~l~l~pGeR~dv~v~~~~--~~g~ 224 (491)
.|+.+ .|.+.|.+.. .+.|.+. |+. |.|...+|..+- ........|.|||...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 55554 5778888875 6777774 444 445555576441 22457899999999999999984 5799
Q ss_pred eEEEEEee
Q 011178 225 YYIVISTR 232 (491)
Q Consensus 225 ~~i~~~~~ 232 (491)
|.+.+...
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99987653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 491 | ||||
| d1aoza3 | 214 | b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C | 2e-36 | |
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 2e-30 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 4e-30 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 1e-28 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 1e-26 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 1e-25 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 1e-14 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 1e-10 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 1e-09 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 5e-09 | |
| d2q9oa3 | 216 | b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce | 1e-08 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 9e-07 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 5e-06 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 6e-06 | |
| d1v10a3 | 190 | b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus | 1e-05 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 4e-05 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 9e-05 | |
| d1kv7a3 | 181 | b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc | 7e-04 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 0.002 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 0.003 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 0.004 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 131 bits (331), Expect = 2e-36
Identities = 47/205 (22%), Positives = 74/205 (36%), Gaps = 21/205 (10%)
Query: 298 NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD------ 351
I L NT ING ++A+N VS TP A + + F P+
Sbjct: 4 KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDY 63
Query: 352 ----NPTGGGAYLQTSVMAADFRGFAEVVFE------NPEDTLQSWHIDGHNFFAVGMDG 401
PT + V +V+ + WH+ GH+F+ +G
Sbjct: 64 DIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 123
Query: 402 GEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYL 461
G+++ + NL++ R TV ++P WTA+ DN G+W ++G
Sbjct: 124 GKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 183
Query: 462 RVYSSANSWRDEYPIPSNALLCGRA 486
IP+ AL CG
Sbjct: 184 AE-----GVEKVGRIPTKALACGGT 203
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 115 bits (288), Expect = 2e-30
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 103 PVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSD--LPFPDGLVINGRGSNAN------ 154
P +D G+ +L DW+ ++ + L S + P +++NGRG
Sbjct: 1 PFHYD---GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKY 57
Query: 155 ------------------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT 196
F V KTYR RI++ ++NF I H++L+VE +G +
Sbjct: 58 DSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYV 117
Query: 197 LQNTYDSLDIHLGQSYSVLVRADQPPQGYY-IVISTRFTS-QVLSATSVLHYSNSAGSV- 253
+DI+ G+SYSVL+ DQ P Y + + TR ++L+Y ++ S
Sbjct: 118 QPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKL 177
Query: 254 -SGPPPGGPTTQIDWSLEQARSLRRNLTASGPRP 286
+ PPP P +++++ +TA+ P
Sbjct: 178 PTSPPPQTPAWD---DFDRSKNFTYRITAAMGSP 208
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 113 bits (283), Expect = 4e-30
Identities = 51/169 (30%), Positives = 70/169 (41%), Gaps = 20/169 (11%)
Query: 106 FDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN--------TFT 157
+D I DWY T L + P PD +ING G N+ +
Sbjct: 1 YDVDDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVS 58
Query: 158 VDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVR 217
V GK YRFRI + + F I GH+M ++EV+G T DSL I GQ YSV+V
Sbjct: 59 VQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVE 118
Query: 218 ADQPPQGYYIVISTRFTSQVLS---ATSVLHYSNSAGSVSGPPPGGPTT 263
A+Q Y+I + + +++ Y G PTT
Sbjct: 119 ANQAVGNYWIRANPSNGRNGFTGGINSAIFRY-------QGAAVAEPTT 160
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 109 bits (273), Expect = 1e-28
Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 16/175 (9%)
Query: 114 TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN-------TFTVDQGKTYRF 166
D+Y + DL + + PF D ++ING N N T+ GK +R
Sbjct: 7 VFPITDYYYRAADDLVHFTQNNAP-PFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRL 65
Query: 167 RISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYY 226
RI N + H M ++ + T DSL + +GQ Y V++ A + P Y+
Sbjct: 66 RILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYW 125
Query: 227 IVISTRFTSQV-----LSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLR 276
++ + ++ HY+ G+ G P T +D +R
Sbjct: 126 FNVTFGGQAACGGSLNPHPAAIFHYA---GAPGGLPTDEGTPPVDHQCLDTLDVR 177
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 104 bits (259), Expect = 1e-26
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 106 FDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN-------TFTV 158
+D + I DWY ++ PD +ING+G V
Sbjct: 6 YDEDDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYVGGPAAELSIVNV 58
Query: 159 DQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRA 218
+QGK YR R+ ++ + F I GH++ ++EV+G T +T D L I GQ YS ++ A
Sbjct: 59 EQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDA 118
Query: 219 DQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTT 263
+QP Y+I L+ T +++ +G PTT
Sbjct: 119 NQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT 163
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 100 bits (250), Expect = 1e-25
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 18/168 (10%)
Query: 106 FDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNAN-------TFTV 158
+D I DWY D +ING G +A+ V
Sbjct: 7 YDVDNESTVITLTDWYHTAARLG------PRFPLGADATLINGLGRSASTPTAALAVINV 60
Query: 159 DQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRA 218
GK YRFR+ ++ + F I GH + ++EV+G ++ DS+ I Q YS ++ A
Sbjct: 61 QHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNA 120
Query: 219 DQPPQGYYIVISTRFTSQVLS---ATSVLHYSNSAGSVSGPPPGGPTT 263
+Q Y+I + F + + +++L Y + V+ P T+
Sbjct: 121 NQTVGNYWIRANPNFGTVGFAGGINSAILRYQGA--PVAEPTTTQTTS 166
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 69.3 bits (169), Expect = 1e-14
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 11/155 (7%)
Query: 112 DFTILAGDWY--KKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRIS 169
D ++ D D + + + + F D L+ NG R R+
Sbjct: 10 DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI---YPQHAAPRGWLRLRLL 66
Query: 170 NVGISTSINFR-IQGHKMLLVEVEGTHTLQ-NTYDSLDIHLGQSYSVLVRADQPPQGYYI 227
N + S+NF + ++ +G + L + +G+ + VLV + +
Sbjct: 67 NGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLV 126
Query: 228 VISTRFTSQVL----SATSVLHYSNSAGSVSGPPP 258
+ + V+ A S SG P
Sbjct: 127 TLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALP 161
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 56.9 bits (137), Expect = 1e-10
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 34 ITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
I +G+ QR +W DG G CPI PG F Y G+++Y G G
Sbjct: 63 IHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRG 122
Query: 93 GIKI 96
+ I
Sbjct: 123 PMVI 126
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 54.3 bits (130), Expect = 1e-09
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 26 NFIYMAPLITLNGVQQRRNSWQDGVYGTN-CPIPPGKNFTYVLQVKDQIGSYFYFPSLAF 84
+ + + I +G Q +W DG N CPI G +F Y V DQ G+++Y L+
Sbjct: 55 HTMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLST 114
Query: 85 HKAAGGYGGIKI 96
G G +
Sbjct: 115 QYCDGLRGPFVV 126
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 52.7 bits (126), Expect = 5e-09
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 34 ITLNGVQQRRNSWQDGVYGTN-CPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYG 92
I +G Q + DG N CPI P ++F Y V Q G+Y+Y L+ G G
Sbjct: 63 IHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRG 122
Query: 93 GIKI 96
+
Sbjct: 123 AFVV 126
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 53.0 bits (126), Expect = 1e-08
Identities = 16/80 (20%), Positives = 24/80 (30%), Gaps = 10/80 (12%)
Query: 374 EVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASR----------LTYNLRDTISRCTV 423
E E P H+ GH+F +G + + N + R T
Sbjct: 77 ENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTT 136
Query: 424 QVYPKSWTAVYVPLDNVGMW 443
+ W + DN G W
Sbjct: 137 MLPAGGWLLLAFRTDNPGAW 156
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 45.8 bits (108), Expect = 9e-07
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
Query: 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPS 81
+ +I +G+ QR W DG + C I PG+ F Y V D G++FY
Sbjct: 48 LTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGH 106
Query: 82 LAFHKAAGGYGGIKIASRPLIPVPFDPPAGD 112
L ++AG YG + + DPP G
Sbjct: 107 LGMQRSAGLYGSLIV----------DPPQGK 127
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 44.3 bits (104), Expect = 5e-06
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 20 THLVVLNFIYMAPL-ITLNGVQQRRNSWQDGV-YGTNCPIPPGKNFTYVLQVKDQIGSYF 77
+ V+N + I +G+ Q+ + DG T CPIPP Q G+ +
Sbjct: 77 VEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSW 136
Query: 78 YFPSLAFHKAAGGYGGIKIASRPLIP 103
Y + G G I+I +P
Sbjct: 137 YHSHFSAQYGNGVVGTIQINGPASLP 162
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 44.8 bits (105), Expect = 6e-06
Identities = 22/144 (15%), Positives = 34/144 (23%), Gaps = 17/144 (11%)
Query: 300 THTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAY 359
+ L + +N+ SF P P+ L + S + G+
Sbjct: 23 DKALNLAFN----FNGTNFFINNASFTPPTVPVLLQ-------ILSGAQTAQDLLPAGSV 71
Query: 360 LQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTIS 419
+H+ GH F V G + RD
Sbjct: 72 YPLPAH--STIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYND--PIFRDV-- 125
Query: 420 RCTVQVYPKSWTAVYVPLDNVGMW 443
T + DN G W
Sbjct: 126 VSTGTPAAGDNVTIRFQTDNPGPW 149
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 44.1 bits (103), Expect = 1e-05
Identities = 30/186 (16%), Positives = 54/186 (29%), Gaps = 25/186 (13%)
Query: 300 THTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAY 359
+ L+ + +N FIP P+ L + S + P++
Sbjct: 23 DINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQ-------ILSGVTNPNDLLP---- 69
Query: 360 LQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTIS 419
+V++ E+ + +H+ GHNF V G YN + +
Sbjct: 70 -GGAVISLPANQVIEISIPGGGN--HPFHLHGHNFDVVRTPGSSV-------YNYVNPVR 119
Query: 420 RCTVQVYPKSWTAVYVPL-DNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPS 478
R V + + + DN G W + G + P+
Sbjct: 120 RDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAIS-PA 178
Query: 479 NALLCG 484
LC
Sbjct: 179 WDDLCP 184
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 41.7 bits (97), Expect = 4e-05
Identities = 11/49 (22%), Positives = 17/49 (34%)
Query: 48 DGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96
G + GK G+Y+Y + H A G +G I +
Sbjct: 104 VAGTGFSPVPKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVV 152
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 41.4 bits (96), Expect = 9e-05
Identities = 28/170 (16%), Positives = 42/170 (24%), Gaps = 22/170 (12%)
Query: 317 RYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVV 376
R+ +N ++ P L + SV E+V
Sbjct: 36 RFTINGTAYESPSVPTLLQIMS------------GAQSANDLLPAGSVYELPRNQVVELV 83
Query: 377 FENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQV-YPKSWTAVY 434
+H+ GH F V G TYN + + R V + +
Sbjct: 84 VPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIR 136
Query: 435 VPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 484
DN G W G + + P A LC
Sbjct: 137 FVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPP-VEWAQLCE 185
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 38.5 bits (89), Expect = 7e-04
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
Query: 133 DSGSDLPFPDGLVINGR--GSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVE 190
+ G F ING+ N F +G+ R+ IS VG F I G + ++
Sbjct: 62 NHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILS 121
Query: 191 VEGTHTLQNTYDSLDIHL--GQSYSVLVR--ADQPPQGYY 226
G + D G VLV+ D P + Y
Sbjct: 122 ENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAY 161
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 36.6 bits (84), Expect = 0.002
Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Query: 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFY---F 79
V + F + V + Q G PG+ T+ + Q G Y Y
Sbjct: 68 VEVEFSNNPSSTVPHNVDFHAATGQGG-GAAATFTAPGRTSTFSFKA-LQPGLYIYHCAV 125
Query: 80 PSLAFHKAAGGYGGIKIASRPLIP 103
+ H A G YG I + + +P
Sbjct: 126 APVGMHIANGMYGLILVEPKEGLP 149
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.6 bits (84), Expect = 0.003
Identities = 12/95 (12%), Positives = 28/95 (29%), Gaps = 18/95 (18%)
Query: 20 THLVVLNFIYMAPLITLNGVQQRRNSWQD-------GVYGTNCPIPPGKNFTYVLQVKDQ 72
++ + N +G+ + + + PG+ +TY+L ++
Sbjct: 86 VYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEE 145
Query: 73 I---------GSYFYFP--SLAFHKAAGGYGGIKI 96
+ Y A+G G + I
Sbjct: 146 QSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLII 180
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 35.9 bits (82), Expect = 0.004
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Query: 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYF--- 79
V L + A + V+ + G + PG+ T + D+ G++ Y
Sbjct: 75 VQLTLVNPATNAMPHNVEFHGATGALGGA-KLTNVNPGEQATLRFKA-DRSGTFVYHCAP 132
Query: 80 -PSLAFHKAAGGYGGIKIASRPLIPVP 105
+ +H +G G + + R + P
Sbjct: 133 EGMVPWHVVSGMSGTLMVLPRDGLKDP 159
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 491 | |||
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 100.0 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.97 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.96 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.96 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.96 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.96 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.95 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.95 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.93 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.93 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.88 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.88 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.88 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.88 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.87 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.87 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.87 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.86 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.86 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.86 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.85 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.85 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.73 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.69 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.64 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.53 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.51 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.51 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.5 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.44 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.39 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.39 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.32 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.3 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.29 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.25 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.22 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.19 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.17 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.15 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.15 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.1 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 99.05 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.05 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.02 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.99 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.96 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.86 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.86 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.85 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 98.77 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.74 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.74 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.63 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 98.6 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.36 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.34 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.31 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.25 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.25 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.19 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.17 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 98.08 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.05 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 98.04 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 98.01 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.0 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 97.98 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.97 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 97.94 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 97.91 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 97.87 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 97.86 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 97.79 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 97.77 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.71 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.63 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 97.61 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.6 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 97.59 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.57 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 97.54 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.5 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.43 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 97.43 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 97.33 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.31 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.3 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 97.25 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.24 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.23 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 97.22 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.2 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.18 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 97.11 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 96.96 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 96.92 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.9 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 96.68 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 96.34 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 96.26 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 96.13 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 96.09 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 96.02 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 96.01 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 95.9 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 95.89 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 95.78 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 95.73 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 95.72 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 95.62 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 95.41 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 95.38 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 95.24 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 95.24 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 94.39 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 92.42 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 87.58 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=2.2e-41 Score=311.83 Aligned_cols=185 Identities=26% Similarity=0.464 Sum_probs=155.6
Q ss_pred ccceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCC---------C-CCCCCCcceeeeEEee
Q 011178 298 NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIP---------D-NPTGGGAYLQTSVMAA 367 (491)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~---------~-~p~~~~~~~~~~~~~~ 367 (491)
+.+++|.+..+....+|..+|+|||.+|..|++|++.+.+++..+.++.+... + .+.+...+.|+.++.+
T Consensus 4 ~~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~~ 83 (214)
T d1aoza3 4 KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQF 83 (214)
T ss_dssp SCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEE
T ss_pred CCCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCceeEEe
Confidence 45788888665556678899999999999999999988877666665543221 1 1223456788999999
Q ss_pred cCCcEEEEEEEcCCC------CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcc
Q 011178 368 DFRGFAEVVFENPED------TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 368 ~~g~~v~~~i~N~~~------~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG 441 (491)
++|++|||+|+|.+. ..||||||||+||||+++.|.|+......+++.+|.||||+.|++++|++|||+|||||
T Consensus 84 ~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnpG 163 (214)
T d1aoza3 84 KIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPG 163 (214)
T ss_dssp CTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCE
T ss_pred cCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCCe
Confidence 999999999999652 46999999999999999999998877777999999999999999999999999999999
Q ss_pred eeeeeecchhhhhcceEEEEEEecCCccCccCCCCCCcchhccccc
Q 011178 442 MWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAV 487 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~ 487 (491)
.|+||||+++|++.|||+.|.|... + ..++|+++++||.+.
T Consensus 164 ~w~~HCH~~~H~~~GM~~~~~v~~~-~----~~~~P~~~~~cg~~~ 204 (214)
T d1aoza3 164 VWAFHCHIEPHLHMGMGVVFAEGVE-K----VGRIPTKALACGGTA 204 (214)
T ss_dssp EEEEEESSHHHHHTTCEEEEEECGG-G----CCCCCHHHHSSHHHH
T ss_pred eEEEEECcHHHHhCcCcEEEEEccc-c----ccCCCccccccccch
Confidence 9999999999999999999987643 2 367999999999653
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=4.2e-35 Score=267.56 Aligned_cols=152 Identities=18% Similarity=0.188 Sum_probs=120.1
Q ss_pred EeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEEcCCC-CCCceeccCCCe
Q 011178 316 QRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPED-TLQSWHIDGHNF 394 (491)
Q Consensus 316 ~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F 394 (491)
..|+|||++|..+..|.+.+...+..... ..+.+..++.++.|++++|++.|... +.||||||||+|
T Consensus 35 ~~wtINg~s~~~~~~p~l~~~~~~~~~~~------------~~~~~~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F 102 (200)
T d1hfua3 35 GRFTINGTAYESPSVPTLLQIMSGAQSAN------------DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAF 102 (200)
T ss_dssp TEEEETTBCCCCCSSCHHHHHHTTCCSGG------------GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCE
T ss_pred cEEEECCEeccCCCCChhhhhhcCCcCcc------------cccccCceEEecCCcceEEEEeeccccccCceeecCCcE
Confidence 47999999999888887765443211111 11224578899999999999988764 679999999999
Q ss_pred EEEeeccCCCCCCCCCCcccCCCCceeeEEeC-CCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCccCccC
Q 011178 395 FAVGMDGGEWTPASRLTYNLRDTISRCTVQVY-PKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDE 473 (491)
Q Consensus 395 ~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~-p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~ 473 (491)
+||+++++.. +++.+|.||||+.|+ +|+|++|||++||||.|+|||||++|++.|||+.|.+..++. .+.
T Consensus 103 ~vl~~~g~~~-------~~~~~~~~rDtv~v~~~G~~~~ir~~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~--~~~ 173 (200)
T d1hfua3 103 SVVRSAGSST-------YNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDA 173 (200)
T ss_dssp EEEECTTCCC-------CCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHH
T ss_pred EEEeccCCCC-------CccccCcccceEEeCCCCEEEEEEEECCCCeeeEEEeCCChHHhCCCcEEEEEcCCCc--ccc
Confidence 9999976532 567889999999997 467999999999999999999999999999999998765532 234
Q ss_pred CCCCCc-chhcccccC
Q 011178 474 YPIPSN-ALLCGRAVG 488 (491)
Q Consensus 474 ~~~p~~-~~~c~~~~~ 488 (491)
..+|++ ..+|+.+..
T Consensus 174 ~~~p~~~~~~C~~~~~ 189 (200)
T d1hfua3 174 NNPPVEWAQLCEIYDD 189 (200)
T ss_dssp CCCCHHHHHHHHHHHT
T ss_pred cCCChhhhcccccccc
Confidence 667776 568998864
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=5.8e-34 Score=259.94 Aligned_cols=164 Identities=20% Similarity=0.239 Sum_probs=123.9
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
.+.++.+.... +..+|+|||++|..+..|.+.+...+.... ...+.+..++.++.++++++++.
T Consensus 22 ~d~~~~l~~~~----~~~~~~iNg~sf~~p~~p~l~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~eiv~~ 85 (199)
T d1gyca3 22 VDKALNLAFNF----NGTNFFINNASFTPPTVPVLLQILSGAQTA------------QDLLPAGSVYPLPAHSTIEITLP 85 (199)
T ss_dssp SSEEEECCEEE----CSSCEEETTBCCCCCSSCHHHHHHTTCCST------------TTSSSTTSEEEECTTCEEEEEEE
T ss_pred ccEEEEEEEec----ccceEEECCEecCCCCcchHHHHhcCCCCc------------ccccccCceEEeccCceeEEEee
Confidence 34555554322 234799999999988888776544321111 12233566788999999999999
Q ss_pred cCC---CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEe---CCCCEEEEEEEccCcceeeeeecchhh
Q 011178 379 NPE---DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQV---YPKSWTAVYVPLDNVGMWNIRSENWAR 452 (491)
Q Consensus 379 N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v---~p~~~~~irf~adnpG~w~~HCHil~H 452 (491)
|.. .+.||||||||+|+||+++++.. +++.+|.+|||+.+ +++++++|||+|||||.|+|||||++|
T Consensus 86 ~~~~~~~~~HP~HlHG~~F~vv~~~~~~~-------~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~w~~HCHi~~H 158 (199)
T d1gyca3 86 ATALAPGAPHPFHLHGHAFAVVRSAGSTT-------YNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFH 158 (199)
T ss_dssp CCTTSCSCSCEEEETTCCEEEEECTTCCC-------CCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHH
T ss_pred cccccCCCceeeeecCCcEEEEeecCCCc-------cCccCcccccceeeeccCCCcEEEEEEECCCCeeEEEEcCchhh
Confidence 764 45699999999999999976542 57788999999887 799999999999999999999999999
Q ss_pred hhcceEEEEEEecCCccCccCCCCCCcch-hccccc
Q 011178 453 QYLGQQFYLRVYSSANSWRDEYPIPSNAL-LCGRAV 487 (491)
Q Consensus 453 ~d~GMm~~~~V~~~~~~~~~~~~~p~~~~-~c~~~~ 487 (491)
++.|||+.|.+.. ++ ++...++|+.+. .|+.+-
T Consensus 159 ~~~GM~~~~~~~~-~~-~~~~~~~p~~~~~~C~~~~ 192 (199)
T d1gyca3 159 LEAGFAIVFAEDV-AD-VKAANPVPKAWSDLCPIYD 192 (199)
T ss_dssp HHTTCEEEEEETH-HH-HHHHCCCCHHHHHHHHHHH
T ss_pred HhccCcEEEEEcC-Cc-ccccCCCCHHHHhhhhhhc
Confidence 9999999985543 33 233456777766 798763
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=1.6e-33 Score=256.21 Aligned_cols=164 Identities=17% Similarity=0.187 Sum_probs=121.3
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
++.++.+.... ..+...|+|||++|.++..|++.+.+.+...... ...+..++.+..++++++++.
T Consensus 22 ~d~~~~~~~~~--~~~~~~~~iNg~~f~~~~~p~l~~~~~g~~~~~~------------~~~~~~~~~~~~~~~~~i~~~ 87 (190)
T d1v10a3 22 ADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQILSGVTNPND------------LLPGGAVISLPANQVIEISIP 87 (190)
T ss_dssp SSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGG------------SSSTTTEEEECTTCEEEEEEE
T ss_pred CCEEEEEEEEe--cCCEeEEEECCEecCCCCCchHHHhhcCCccccc------------ccccceeEEccCccEEEEEec
Confidence 45666655432 2235689999999998888887655432111111 111345677888999998888
Q ss_pred cCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCC-EEEEEEEccCcceeeeeecchhhhhcce
Q 011178 379 NPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKS-WTAVYVPLDNVGMWNIRSENWARQYLGQ 457 (491)
Q Consensus 379 N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~-~~~irf~adnpG~w~~HCHil~H~d~GM 457 (491)
|. +.||||||||+|+|++++++.. +++.+|.||||+.|+++| +++|||+|||||.|+|||||++|++.||
T Consensus 88 ~~--~~HP~HlHG~~F~Vl~~~~~~~-------~~~~~~~~rDTv~v~~~g~~~~irf~adnpG~w~~HCHi~~H~~~GM 158 (190)
T d1v10a3 88 GG--GNHPFHLHGHNFDVVRTPGSSV-------YNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGL 158 (190)
T ss_dssp CC--BSCEEEESSCCEEEEECTTCSC-------CCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTC
T ss_pred cC--ccccccccCceEEEEEcCCCcc-------cccccCcccCEEEeCCCeEEEEEEEEcCCCeeEEEecCchhhhhCCC
Confidence 74 5899999999999999865432 567889999999999876 7889999999999999999999999999
Q ss_pred EEEEEEecCCccCccCCCCCCc-chhccccc
Q 011178 458 QFYLRVYSSANSWRDEYPIPSN-ALLCGRAV 487 (491)
Q Consensus 458 m~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 487 (491)
|+.|.+..++- .+...+|.. ..+|..+.
T Consensus 159 ~~~~~~~~~~~--~~~~~~~~~~~~~c~~~~ 187 (190)
T d1v10a3 159 AVVFAEDIPNI--PIANAISPAWDDLCPKYN 187 (190)
T ss_dssp EEEEEESGGGH--HHHSCCCHHHHTHHHHHT
T ss_pred cEEEEECCCCC--CccCCCCHHHHhhhhhcc
Confidence 99998765432 223445544 55897664
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=4.8e-33 Score=243.59 Aligned_cols=132 Identities=9% Similarity=0.013 Sum_probs=103.6
Q ss_pred cceEEEEeccccCcCCeEeEEEcCeeeeCCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecCCcEEEEEEE
Q 011178 299 TTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFE 378 (491)
Q Consensus 299 ~~~~~~l~~~~~~~~~~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 378 (491)
..|++.+.... ...|...|.|||++|.+| .. .+++.|++++|.|.
T Consensus 12 ~~r~~~l~~~~-~~~g~~~~~ing~~~~~~---~~-------------------------------~~~~~G~~e~W~i~ 56 (154)
T d1gska3 12 NIRTLKLAGTQ-DEYGRPVLLLNNKRWHDP---VT-------------------------------ETPKVGTTEIWSII 56 (154)
T ss_dssp EEEEEEEEEEE-CTTSCEEEEETTBCTTSC---CC-------------------------------BCCBTTCEEEEEEE
T ss_pred eEEEEEEcccc-cccCCceEEECCcCcCCC---cc-------------------------------cccCCCCEEEEEEE
Confidence 34566665433 234566799999998532 10 24578999999999
Q ss_pred cCCCCCCceeccCCCeEEEeeccCCCCC---------C-CCCCcccCCCCceeeEEeCCCCEEEEEEE-ccCcceeeeee
Q 011178 379 NPEDTLQSWHIDGHNFFAVGMDGGEWTP---------A-SRLTYNLRDTISRCTVQVYPKSWTAVYVP-LDNVGMWNIRS 447 (491)
Q Consensus 379 N~~~~~HP~HlHG~~F~Vl~~g~g~~~~---------~-~~~~~~~~~p~~rDTv~v~p~~~~~irf~-adnpG~w~~HC 447 (491)
|.+.+.|||||||++||||+++.+.+.. . ........++.||||+.|+|+++++|||+ +||||.|+|||
T Consensus 57 N~~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HC 136 (154)
T d1gska3 57 NPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHC 136 (154)
T ss_dssp ECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEE
T ss_pred eCCCCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceEEec
Confidence 9999999999999999999997543211 0 11223455678999999999999999998 69999999999
Q ss_pred cchhhhhcceEEEEEEec
Q 011178 448 ENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 448 Hil~H~d~GMm~~~~V~~ 465 (491)
|||+|||.|||+.|+|++
T Consensus 137 Hil~Hed~GMM~~~~V~e 154 (154)
T d1gska3 137 HILEHEDYDMMRPMDITD 154 (154)
T ss_dssp SCHHHHTTTCEEEEEEBC
T ss_pred CcchHhhCcCceEEEEeC
Confidence 999999999999999974
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=9.2e-33 Score=255.18 Aligned_cols=170 Identities=14% Similarity=0.104 Sum_probs=117.9
Q ss_pred ceEEEEeccccCcCCeEeEEEcCeeee-CCCCccccccccCCCCccccCCCCCCCCCCCcceeeeEEeecC-CcEEEEEE
Q 011178 300 THTIRLQNTAPTINGKQRYAVNSVSFI-PADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADF-RGFAEVVF 377 (491)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~iNg~~f~-~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-g~~v~~~i 377 (491)
++++.+..... ......|.|||++|. +++.|+|...+.+... ......++.+.. +.+..+++
T Consensus 13 d~t~~~~~~~~-g~~~~~w~iNg~s~~~d~~~P~L~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~i 76 (216)
T d2q9oa3 13 DNTLPVALDLT-GTPLFVWKVNGSDINVDWGKPIIDYILTGNTS---------------YPVSDNIVQVDAVDQWTYWLI 76 (216)
T ss_dssp GGEEEEEEECS-SSSSCEEEETTBCCCCCTTSCHHHHHHHTCCC---------------CCGGGCEEEECCSSCEEEEEE
T ss_pred CccEEEEEEeC-CCcEEEEEECCEecccCCCCCChhhhhcCCcc---------------cccccceeeccccccceeEEE
Confidence 44554443221 223468999999985 6778877543321100 011223344444 34444555
Q ss_pred EcC----CCCCCceeccCCCeEEEeeccCCCCCCC----------CCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 378 ENP----EDTLQSWHIDGHNFFAVGMDGGEWTPAS----------RLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 378 ~N~----~~~~HP~HlHG~~F~Vl~~g~g~~~~~~----------~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
++. ..+.||||||||+||||+++.+.+.... ...+++.+|.||||+.|++++|++|||++||||.|
T Consensus 77 ~~~~~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~adnpG~W 156 (216)
T d2q9oa3 77 ENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAW 156 (216)
T ss_dssp EECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEE
T ss_pred EeccCCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEECCCCeEE
Confidence 443 3467999999999999999988765432 13478899999999999999999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEecCCccCccCC--CCCC-cchhccccc
Q 011178 444 NIRSENWARQYLGQQFYLRVYSSANSWRDEY--PIPS-NALLCGRAV 487 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~--~~p~-~~~~c~~~~ 487 (491)
+|||||++|++.|||+.| +++++++ .+.. .+|+ ....|+.++
T Consensus 157 l~HCHi~~H~~~GM~~~~-~~~p~~~-~~~~~~~~~~~~~~~C~~w~ 201 (216)
T d2q9oa3 157 LFHCHIAWHVSGGLSVDF-LERPADL-RQRISQEDEDDFNRVCDEWR 201 (216)
T ss_dssp EEEECCHHHHHTTCEEEE-EECHHHH-GGGCCHHHHHHHHHHHHHHH
T ss_pred EEEccCCcccccCCeEEE-EEcchhh-hhcccCCCchhhhccChhhc
Confidence 999999999999999999 5566553 2222 2454 467998765
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=6.8e-32 Score=229.77 Aligned_cols=97 Identities=22% Similarity=0.297 Sum_probs=89.8
Q ss_pred CcccCCCCeEEE--eeeEEEEEEecCC-----CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccce
Q 011178 5 NHFSSLGCSLIT--HLYTHLVVLNFIY-----MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSY 76 (491)
Q Consensus 5 ~~~~~~G~~l~v--~d~v~i~~~N~l~-----~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~ 76 (491)
.++..+||+|++ ||+|+|+|+|+|+ ++|||||||+++.+++++||+++ +||+|+||++|+|+|++++++|||
T Consensus 27 ~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~~~t~~~I~PG~~~~Y~~~~~~~~Gt~ 106 (136)
T d1v10a1 27 AEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTY 106 (136)
T ss_dssp ESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEE
T ss_pred ECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCCccccceECCCCeEEEEEECCCCccce
Confidence 567789999987 4899999999976 78999999999999999999998 999999999999999998789999
Q ss_pred eEeCCccccccCCceeEEEEecCCC
Q 011178 77 FYFPSLAFHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 77 wYH~H~~~q~~~Gl~G~liV~~~~~ 101 (491)
|||||.+.|+++||+|+|||+++++
T Consensus 107 wYH~H~~~q~~~GL~G~liV~~~~d 131 (136)
T d1v10a1 107 WYHSHLSTQYCDGLRGAFVVYDPND 131 (136)
T ss_dssp EEEECSTTGGGGTCEEEEEEECTTC
T ss_pred EEecCchhHHhCCCEEEEEECCCcc
Confidence 9999999999999999999998754
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=2.7e-30 Score=230.70 Aligned_cols=141 Identities=23% Similarity=0.401 Sum_probs=121.3
Q ss_pred CCCcc-eEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC-------CcceEEEeCCCEEEEEEEEcCCCCeEeEE
Q 011178 109 PAGDF-TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS-------NANTFTVDQGKTYRFRISNVGISTSINFR 180 (491)
Q Consensus 109 ~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~-------~~~~~~v~~g~~~rlR~iN~~~~~~~~~~ 180 (491)
||.|. +|+|+||+|+...++...... ...+.+|++||||++. ....++|++|++|||||||+|..+.+.|+
T Consensus 1 YD~D~~vi~lsDW~h~~~~~~~~~~~~-~~~p~~d~~LINGkg~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~ 79 (181)
T d2q9oa2 1 YDIDLGVFPITDYYYRAADDLVHFTQN-NAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVS 79 (181)
T ss_dssp CSEEEEEEEEEEECSSCHHHHHHHHTT-SCCCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEE
T ss_pred CCccCeeEEEEecCCCCHHHHHhhccc-CCCCCcceEEECCcCCCCCCCCCcceEEEECCCCEEEEEEecccCCccEEEE
Confidence 36666 899999999988777654433 3566789999999974 34689999999999999999999999999
Q ss_pred EeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccC-----CCcceEEEEEecCCC
Q 011178 181 IQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTS-----QVLSATSVLHYSNSA 250 (491)
Q Consensus 181 i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~-----~~~~~~ail~y~~~~ 250 (491)
|+||+|+|||+||.+++|..+++|.|+|||||||+|+++|++|+|||++...... ......|||+|.++.
T Consensus 80 id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~~Y~ir~~~~~~~~~~~~~~~~~~ail~Y~ga~ 154 (181)
T d2q9oa2 80 LVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP 154 (181)
T ss_dssp ETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC
T ss_pred ECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCccEEEEEeccccccccCCCCCceEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999998864321 235678999998764
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=3e-30 Score=227.82 Aligned_cols=140 Identities=33% Similarity=0.514 Sum_probs=118.6
Q ss_pred CCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC--------CcceEEEeCCCEEEEEEEEcCCCCeEeEE
Q 011178 109 PAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS--------NANTFTVDQGKTYRFRISNVGISTSINFR 180 (491)
Q Consensus 109 ~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~--------~~~~~~v~~g~~~rlR~iN~~~~~~~~~~ 180 (491)
.|.|.+|+|+||+++...++.. ..+...+.+++++|||++. ..++++|++|++|||||||+|+.+.+.|+
T Consensus 4 Dd~e~vi~lsDW~h~~~~~l~~--~~~~~~~~pd~~liNGkg~~~~~~~~~~~~~~~v~~g~~~rlRlina~~~~~~~~~ 81 (168)
T d1v10a2 4 DDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFS 81 (168)
T ss_dssp CSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEE
T ss_pred CCCccEEEEEECCCCCHHHHHh--ccCCCCCCCceeeecCCCCcCCCCcCCCceEEEECCCCEEEEEEEecccCceEEEE
Confidence 3578999999999998766533 2345678899999999974 35689999999999999999999999999
Q ss_pred EeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCC---CcceEEEEEecCCC
Q 011178 181 IQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQ---VLSATSVLHYSNSA 250 (491)
Q Consensus 181 i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~---~~~~~ail~y~~~~ 250 (491)
|++|+|+|||+||.+++|..++++.|+|||||||+|++++++|+|||++......+ .....|+|+|.++.
T Consensus 82 id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~aiL~Y~g~~ 154 (168)
T d1v10a2 82 IDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAA 154 (168)
T ss_dssp ETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCC
T ss_pred ECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCCCCCcEEEEEEeccCCCcCCCCceEEEEEECCCC
Confidence 99999999999999999999999999999999999999998999999998765432 23567999998764
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.97 E-value=4.5e-30 Score=227.78 Aligned_cols=139 Identities=30% Similarity=0.557 Sum_probs=119.8
Q ss_pred CCCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC-------CcceEEEeCCCEEEEEEEEcCCCCeE
Q 011178 105 PFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS-------NANTFTVDQGKTYRFRISNVGISTSI 177 (491)
Q Consensus 105 ~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~-------~~~~~~v~~g~~~rlR~iN~~~~~~~ 177 (491)
.|+.+|+|++|+|+||+++...++ ...+.++..+|||++. ..++|+|++|++|||||||+|+.+.+
T Consensus 5 ~YD~dD~e~vl~l~DW~h~~~~~~-------~~~~~pd~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~ 77 (172)
T d1hfua2 5 LYDEDDENTIITLADWYHIPAPSI-------QGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNW 77 (172)
T ss_dssp GCSBCSTTSEEEEEEECSSCGGGC-------C---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred cCCCCCCeEEEEEEECCCCChHHh-------hccCCCCcEEECccCccCCCCCCCceEEEECCCCEEEEEEeeecCCceE
Confidence 466668999999999999976544 2345789999999975 35889999999999999999999999
Q ss_pred eEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCC-------CcceEEEEEecCCC
Q 011178 178 NFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQ-------VLSATSVLHYSNSA 250 (491)
Q Consensus 178 ~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~-------~~~~~ail~y~~~~ 250 (491)
.|+|++|+|+|||+||.+++|+.+++|.|++||||||+|++++++|+|||++....... .....|+|+|.++.
T Consensus 78 ~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~~~~~Y~ira~~~~~~~~~~~~~~~~~~~aiL~Y~g~~ 157 (172)
T d1hfua2 78 QFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAA 157 (172)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSC
T ss_pred EEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCCCCCcEEEEEEeccCcccccCcCCCceEEEEEEECCCC
Confidence 99999999999999999999999999999999999999999998899999998754321 23578999999764
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.96 E-value=6.3e-29 Score=229.75 Aligned_cols=175 Identities=29% Similarity=0.492 Sum_probs=136.9
Q ss_pred CCCCcceEEeeecccCCHHHHHHHHhcC--CCCCCCceEEEcCcCC------------------------CcceEEEeCC
Q 011178 108 PPAGDFTILAGDWYKKNHTDLKAILDSG--SDLPFPDGLVINGRGS------------------------NANTFTVDQG 161 (491)
Q Consensus 108 ~~~~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~vNG~~~------------------------~~~~~~v~~g 161 (491)
.||+|++|+|+||+|....++...+..+ .....++..+|||++. ..++++|++|
T Consensus 3 ~yD~e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 82 (209)
T d1aoza2 3 HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPK 82 (209)
T ss_dssp CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTT
T ss_pred CCCceEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCCcCCCcccccccccccccccCCCCCCceEEEEcCC
Confidence 4699999999999999877765544433 3456789999999874 2467999999
Q ss_pred CEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCc-ceEEEEEeeccC-CCcc
Q 011178 162 KTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQ-GYYIVISTRFTS-QVLS 239 (491)
Q Consensus 162 ~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g-~~~i~~~~~~~~-~~~~ 239 (491)
++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++.|.|+|||||||+|+++++++ +|||++...... +...
T Consensus 83 ~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~~~~~~~~ 162 (209)
T d1aoza2 83 KTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPP 162 (209)
T ss_dssp CEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCC
T ss_pred CEEEEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999998654 699998876543 4567
Q ss_pred eEEEEEecCCCCCCCC--CCCCCCCccccchhhhhhhhccCCCCCCCC
Q 011178 240 ATSVLHYSNSAGSVSG--PPPGGPTTQIDWSLEQARSLRRNLTASGPR 285 (491)
Q Consensus 240 ~~ail~y~~~~~~~~~--~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~ 285 (491)
..|+|+|.+....... +.|..|.. ..+++++.+.++++.....
T Consensus 163 ~~ail~y~~~~~~~~~~~~~p~~p~~---~D~~~a~~f~~~~~~~~~~ 207 (209)
T d1aoza2 163 GLTLLNYLPNSVSKLPTSPPPQTPAW---DDFDRSKNFTYRITAAMGS 207 (209)
T ss_dssp EEEEEEETTSCTTSCCSSCCCCCCCT---TCHHHHHHHHTTCCBCTTC
T ss_pred eeEEEEeCCCCcCCCCCCCCCCCCCc---cchHHHHhhhhhhhccCCC
Confidence 8999999876543221 11222210 1355666677777665443
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.96 E-value=2.5e-30 Score=218.83 Aligned_cols=92 Identities=26% Similarity=0.451 Sum_probs=84.7
Q ss_pred CCCCeEEE--eeeEEEEEEecCCC-----CCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 9 SLGCSLIT--HLYTHLVVLNFIYM-----APLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 9 ~~G~~l~v--~d~v~i~~~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
.+||+|++ ||+|+|+|+|+|++ +++|||||++++.++++||+++ +||+|.||++|+|+|++.+++|||||||
T Consensus 31 ~pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g~~~~~I~PG~~~~y~~~~~~~~Gt~wYH~ 110 (131)
T d1hfua1 31 VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHS 110 (131)
T ss_dssp BSSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEE
T ss_pred cCCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCcccccceECCCCeEEEEEeCCCCcceEEEec
Confidence 47888887 47889999999974 5899999999999999999999 9999999999999999778899999999
Q ss_pred CccccccCCceeEEEEecCC
Q 011178 81 SLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 81 H~~~q~~~Gl~G~liV~~~~ 100 (491)
|++.|+++||+|+|||++++
T Consensus 111 H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 111 HFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp CSTTGGGGTCEEEEEEECTT
T ss_pred CCHHHHhCCCEEEEEEcCCC
Confidence 99999999999999999865
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.96 E-value=7.4e-29 Score=219.22 Aligned_cols=139 Identities=27% Similarity=0.456 Sum_probs=117.7
Q ss_pred CCCCCCcceEEeeecccCCHHHHHHHHhcCCCCCCCceEEEcCcCC-------CcceEEEeCCCEEEEEEEEcCCCCeEe
Q 011178 106 FDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGS-------NANTFTVDQGKTYRFRISNVGISTSIN 178 (491)
Q Consensus 106 ~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~vNG~~~-------~~~~~~v~~g~~~rlR~iN~~~~~~~~ 178 (491)
|+..+.|.+|+|+||+++.... .......++..+|||++. ..++++|++|++|||||||+|+.+.+.
T Consensus 7 YD~D~ee~vi~lsDWyh~~~~~------~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~ 80 (170)
T d1gyca2 7 YDVDNESTVITLTDWYHTAARL------GPRFPLGADATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYT 80 (170)
T ss_dssp CSBCSGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEE
T ss_pred CCCCCCceEEEEeecCCChhhh------cccCCCcCCcccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCceee
Confidence 4333466899999999986431 233456689999999975 357899999999999999999999999
Q ss_pred EEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCC---CcceEEEEEecCCC
Q 011178 179 FRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQ---VLSATSVLHYSNSA 250 (491)
Q Consensus 179 ~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~---~~~~~ail~y~~~~ 250 (491)
|+|++|+|+|||+||.+++|..+++|.|++||||||+|++++++|+|||++....... .....|+|+|+++.
T Consensus 81 ~~id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~aiL~Y~~a~ 155 (170)
T d1gyca2 81 FSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSAILRYQGAP 155 (170)
T ss_dssp EEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSC
T ss_pred EEeCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCCCCCcEEEEEeccccccccCCCeeEEEEEECCCC
Confidence 9999999999999999999999999999999999999999998999999998754332 34568999998764
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.96 E-value=9.9e-30 Score=215.18 Aligned_cols=97 Identities=23% Similarity=0.333 Sum_probs=88.4
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCC-----CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCcc
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIY-----MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIG 74 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~-----~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~G 74 (491)
|..++..+||+|++ ||+|+|+|+|+++ ++++|||||+++.+++++||+++ +||+|.||++|+|+|++++++|
T Consensus 25 ~~~ng~~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~~~s~~~i~PG~s~~Y~~~~~~~~G 104 (130)
T d1gyca1 25 IVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAG 104 (130)
T ss_dssp EEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECSSCCE
T ss_pred EEECCcccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCccccccCCCCCCCeEEEEEECCCCCc
Confidence 34466778888887 4788999999976 67899999999999999999998 9999999999999999987899
Q ss_pred ceeEeCCccccccCCceeEEEEecC
Q 011178 75 SYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 75 t~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
|||||||+..|+++||+|+|||+++
T Consensus 105 t~wYH~H~~~~~~~Gl~G~liV~~p 129 (130)
T d1gyca1 105 TFWYHSHLSTQYCDGLRGPFVVYDP 129 (130)
T ss_dssp EEEEEECSTTGGGGTCEEEEEEECT
T ss_pred eeEEecCCHHHHhCCCEEEEEEeCC
Confidence 9999999999999999999999986
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.95 E-value=1.1e-28 Score=209.44 Aligned_cols=98 Identities=26% Similarity=0.453 Sum_probs=89.7
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeE
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFY 78 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wY 78 (491)
|-.++..|||+|++. |+|+|+|+|+|+ ++++|||||+++.+.+++||+++ +||+|+||++|+|+|++ +++|||||
T Consensus 25 ~~~NG~~PGP~i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~~~~~~I~PG~s~~y~f~a-~~~Gt~~Y 103 (129)
T d1aoza1 25 MGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFY 103 (129)
T ss_dssp EEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEE
T ss_pred EEECCCcCCCeEEEECCcEEEEEEEeCCCCCCeeeeeccceeeccCccccccccccceECCCCEEEEEEEC-CCCCceEE
Confidence 345677889999874 899999999986 79999999999999999999998 99999999999999999 58999999
Q ss_pred eCCccccccCCceeEEEEecCCC
Q 011178 79 FPSLAFHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 79 H~H~~~q~~~Gl~G~liV~~~~~ 101 (491)
|||...|+++||+|+|||+++++
T Consensus 104 H~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 104 HGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp EECSTTTGGGTCEEEEEEECCTT
T ss_pred ecCCHHHHhCCCEEEEEEcCCCC
Confidence 99999999999999999999875
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=7.9e-29 Score=220.86 Aligned_cols=91 Identities=19% Similarity=0.147 Sum_probs=77.5
Q ss_pred EeecCCcEEEEEEEcCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCE-EEEEEEcc--Cc
Q 011178 365 MAADFRGFAEVVFENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSW-TAVYVPLD--NV 440 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~-~~irf~ad--np 440 (491)
+.++.|++|+|+|.|.+. +.|||||||++|+|++++.+.. ...++.|||||.|+++++ ++|+|+++ ++
T Consensus 87 ~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~--------~~~~~~~kDTv~v~~~~~~v~v~f~~~~~~~ 158 (181)
T d1kv7a3 87 FAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP--------AAHRAGWKDTVKVEGNVSEVLVKFNHDAPKE 158 (181)
T ss_dssp EECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCC--------CGGGSSSBSEEEESSSEEEEEECCCSCCCGG
T ss_pred eEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCc--------cccCCcceeEEEeCCCceEEEEEEEeeCCCC
Confidence 567899999999999885 5799999999999999976543 234578999999988764 67788765 56
Q ss_pred ceeeeeecchhhhhcceEEEEEE
Q 011178 441 GMWNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 441 G~w~~HCHil~H~d~GMm~~~~V 463 (491)
|.|+||||||+|+|.|||+.|+|
T Consensus 159 G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 159 HAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp GCEEEEESSHHHHHTTCEEEEEC
T ss_pred CeEEEeCChHHHHhCCCCEEEEC
Confidence 99999999999999999999986
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=3.3e-27 Score=202.00 Aligned_cols=94 Identities=19% Similarity=0.238 Sum_probs=83.9
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-.+++.+||+|++. |+|+|+|+|+|+++++|||||+++. +.+||++ +++|.||++++|+|++.+++|||||||
T Consensus 37 ~~~NG~~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~--~~~i~pg~~~~y~~~~~~~aGt~wyH~ 112 (140)
T d1kv7a1 37 WGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGIIPPGGKRSVTLNVDQPAATCWFHP 112 (140)
T ss_dssp EEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--TCCBCTTCEEEEEEECCSCSEEEEEEC
T ss_pred EEECCccCCceEEEECCCEEEEEEEeCccccccEeeeeeecC--CccCCCc--cceEccCCceeEEEEEecCCeeEEEEE
Confidence 446788999999984 8999999999999999999999974 5699986 688999999999999976689999999
Q ss_pred Ccc----ccccCCceeEEEEecCC
Q 011178 81 SLA----FHKAAGGYGGIKIASRP 100 (491)
Q Consensus 81 H~~----~q~~~Gl~G~liV~~~~ 100 (491)
|.+ .|+++||+|+|||++++
T Consensus 113 H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 113 HQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp CCTTTHHHHHHTTCCEEEEEECHH
T ss_pred CCCCChHHHHhCCCeEEEEECCcc
Confidence 974 78999999999999865
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.93 E-value=2.6e-26 Score=202.06 Aligned_cols=98 Identities=24% Similarity=0.439 Sum_probs=88.7
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC-CCCeeeecccCCCCCCCCCCCCC-CCCCC-CCCCeEEEEEEeCCCcccee
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY-MAPLITLNGVQQRRNSWQDGVYG-TNCPI-PPGKNFTYVLQVKDQIGSYF 77 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~~i-~PG~~~~Y~f~~~~~~Gt~w 77 (491)
|..++..+||+|++. |+|+|+|+|+++ ..++|||||+++.+.+++||+++ +||+| +||++++|+|.+ +++||||
T Consensus 58 ~~~NG~~PGPtI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~~~~~~~~i~~pg~~~~y~f~~-~~~Gt~w 136 (162)
T d2q9oa1 58 MLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSW 136 (162)
T ss_dssp EEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEEC-CSCEEEE
T ss_pred EEECCcccCCeEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCCcccccceecCCCCEEEeeecC-CCCEEEE
Confidence 455778899999884 899999999996 78999999999999999999998 99997 559999999999 6899999
Q ss_pred EeCCccccccCCceeEEEEecCCC
Q 011178 78 YFPSLAFHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 78 YH~H~~~q~~~Gl~G~liV~~~~~ 101 (491)
||||++.|+++||+|+|||++++.
T Consensus 137 YH~H~~~q~~~Gl~G~~iV~~p~~ 160 (162)
T d2q9oa1 137 YHSHFSAQYGNGVVGTIQINGPAS 160 (162)
T ss_dssp EEECSTTGGGGTCEEEEEEECCCS
T ss_pred eecCCHHHHhCCCEEEEEECCCCC
Confidence 999999999999999999998764
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3e-24 Score=186.78 Aligned_cols=85 Identities=13% Similarity=0.201 Sum_probs=76.4
Q ss_pred EeecCCcEEEEEEEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 365 MAADFRGFAEVVFENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.++.|+.|+|.|.|.+. +.||||+||+.|++...+ +.+|||+.|+||++++++|+|++||.
T Consensus 62 l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~~~g----------------~~~~dtv~i~pg~~~~~~~~a~~pG~ 125 (149)
T d2j5wa5 62 LTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGI 125 (149)
T ss_dssp CEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEE
T ss_pred eEEEcCCcEEEEEEecCCCCCccceEEEeeEeeeeccC----------------CCCcceEEECCCceEEEEEeCCCCee
Confidence 467889999999999764 469999999999885432 35899999999999999999999999
Q ss_pred eeeeecchhhhhcceEEEEEEec
Q 011178 443 WNIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~~ 465 (491)
|+||||+++|++.|||+.|.|.+
T Consensus 126 w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 126 WLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp EEEEECCHHHHHTTCEEEEEEEC
T ss_pred EEEEcCCHHHHhccCceEEEEec
Confidence 99999999999999999999975
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.88 E-value=8.6e-24 Score=184.88 Aligned_cols=94 Identities=19% Similarity=0.253 Sum_probs=75.8
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-.++..+||+|++ ||+|+|+|+|+++ ++||||++..+. ++++.+ ++++|.||++|+|+|++ +++||||||
T Consensus 56 ~t~NG~~PGPtI~v~~Gd~v~v~~~N~~~---~~h~h~ih~hg~--~~~~~g~~~~~I~PG~t~ty~f~a-~~~Gt~~yH 129 (159)
T d1oe2a1 56 MTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVEFHGA--TGALGGAKLTNVNPGEQATLRFKA-DRSGTFVYH 129 (159)
T ss_dssp EEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTS--CSGGGGGGGCCBCTTEEEEEEEEC-CSCEEEEEE
T ss_pred EEECCcCCCCeEEEECCcEEEEEEECCCc---cccccceeeccc--cCCCCCcccccCCCCCeEEEEEEc-CCCceEEEE
Confidence 45677889999988 5899999999985 345555544433 456666 78899999999999999 589999999
Q ss_pred CCcc----ccccCCceeEEEEecCCCC
Q 011178 80 PSLA----FHKAAGGYGGIKIASRPLI 102 (491)
Q Consensus 80 ~H~~----~q~~~Gl~G~liV~~~~~~ 102 (491)
||.. .|+++||+|+|||++++..
T Consensus 130 ~H~~~~~~~q~~~Gl~G~liV~p~e~~ 156 (159)
T d1oe2a1 130 CAPEGMVPWHVVSGMSGTLMVLPRDGL 156 (159)
T ss_dssp CCCTTCHHHHHHTTCEEEEEEECTTCC
T ss_pred eCCCCCchhHHhCCCEEEEEEECCCCC
Confidence 9954 6999999999999987653
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=5.8e-23 Score=182.29 Aligned_cols=139 Identities=14% Similarity=0.210 Sum_probs=106.4
Q ss_pred CCCCcceEEeeecccCCHHHHHHHH-----------hcCCCCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCe
Q 011178 108 PPAGDFTILAGDWYKKNHTDLKAIL-----------DSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTS 176 (491)
Q Consensus 108 ~~~~e~~l~l~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~ 176 (491)
.+++|++|+|+||+++.+.++.... .....+..++.++|||+. .|.+++++ ++|||||||+|..+.
T Consensus 4 ~gd~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~--~p~~~v~~-~~~RlRliNa~~~~~ 80 (174)
T d1gska2 4 SDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKV--WPYLEVEP-RKYRFRVINASNTRT 80 (174)
T ss_dssp CGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEE--SCEEECCS-SEEEEEEEECCSSCC
T ss_pred CCCCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCcc--ceEEEecC-ceEEEEEEecccCce
Confidence 4588999999999988765541100 001123457899999999 89999975 689999999999999
Q ss_pred EeEEEe-CceeEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccC---CCcceEEEEEecCC
Q 011178 177 INFRIQ-GHKMLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTS---QVLSATSVLHYSNS 249 (491)
Q Consensus 177 ~~~~i~-~~~~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~---~~~~~~ail~y~~~ 249 (491)
+.|+++ +|+|+|||+||+++ +|+.++.+.|+|||||||+|++++.+|.+++........ .......+++|...
T Consensus 81 ~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~vl~~~v~ 158 (174)
T d1gska2 81 YNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVT 158 (174)
T ss_dssp EEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSCCCTTTTTEEEEEECC
T ss_pred eeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCCCCceEEEEccCCCCCccCCCCCcceEEEEec
Confidence 999995 78999999999998 699999999999999999999997677766555432211 11233456777644
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=2.9e-23 Score=188.37 Aligned_cols=98 Identities=19% Similarity=0.255 Sum_probs=78.3
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCC----CCC------CCCCCC-CCCCCCCCCeEEEEEEeC
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRR----NSW------QDGVYG-TNCPIPPGKNFTYVLQVK 70 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~----~~~------~DG~~~-~q~~i~PG~~~~Y~f~~~ 70 (491)
+-|..-+||+|++ ||+|+|+|+|+++.++||||||+.+.. .++ .+|... ++|+|+||++|+|+|+++
T Consensus 78 ~~~lG~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~ 157 (207)
T d2j5wa3 78 EEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVP 157 (207)
T ss_dssp GGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECC
T ss_pred chhcCCcCceEEEECCCEEEEEEEECCCCCccccccccccCcccccccccCCCCcccCCcCcccceecCCCEEEEEEEec
Confidence 3456678898875 589999999999999999999997532 222 233334 689999999999999997
Q ss_pred CCcc---------ceeEeCCcc--ccccCCceeEEEEecCCC
Q 011178 71 DQIG---------SYFYFPSLA--FHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 71 ~~~G---------t~wYH~H~~--~q~~~Gl~G~liV~~~~~ 101 (491)
++.| |||||||++ .|+++||+|+|||+++..
T Consensus 158 ~~~gP~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~ 199 (207)
T d2j5wa3 158 KEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 199 (207)
T ss_dssp GGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCCCCccCCCCceeEEEccCCChhHhhccCceEEEEEccCCC
Confidence 6555 999999987 677999999999998754
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.88 E-value=2.2e-23 Score=185.42 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=80.6
Q ss_pred CCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCC----CCCCCCCCCC---CCCCCCCCCeEEEEEEeCC---
Q 011178 4 MNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQR----RNSWQDGVYG---TNCPIPPGKNFTYVLQVKD--- 71 (491)
Q Consensus 4 ~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~----~~~~~DG~~~---~q~~i~PG~~~~Y~f~~~~--- 71 (491)
+.+..-+||+||+ ||+|+|+|+|+|+.++||||||+.+. +..++||++. .+++|+||++|+|+|.+++
T Consensus 52 ~~~~g~~GP~Ira~~GD~i~V~f~N~~~~~~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~g 131 (180)
T d1sdda1 52 SRTSGLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSG 131 (180)
T ss_dssp CSSCCSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGS
T ss_pred CcccCCcCCeEEEECCcEEeeEEEeCCCCCccccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCccc
Confidence 3445568888875 57888889999999999999999864 3456777765 3458999999999999964
Q ss_pred ------CccceeEeCCcc--ccccCCceeEEEEecCCC
Q 011178 72 ------QIGSYFYFPSLA--FHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 72 ------~~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~~ 101 (491)
++||||||||.+ .|+++||+|+|||+++..
T Consensus 132 p~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g~ 169 (180)
T d1sdda1 132 PTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGT 169 (180)
T ss_dssp CCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTC
T ss_pred CccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccCCC
Confidence 358999999987 599999999999999764
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=5e-23 Score=181.07 Aligned_cols=118 Identities=17% Similarity=0.204 Sum_probs=95.7
Q ss_pred CCCcceEEeeecccCCHHHHHH--HHhcCCCCCCCceEEEcCcCCCcceEEEeCCCEEEEEEEEcCCCCeEeEEE-eCce
Q 011178 109 PAGDFTILAGDWYKKNHTDLKA--ILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRI-QGHK 185 (491)
Q Consensus 109 ~~~e~~l~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~~vNG~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i-~~~~ 185 (491)
+.+|++|+|+||+++.++++.. ..........++.++|||+. .|.+.++ |++|||||||+|..+.+.|++ +||+
T Consensus 7 g~ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~--~p~~~~~-~~~~RlR~iNa~~~~~~~~~~~~g~~ 83 (165)
T d1kv7a2 7 GIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI--YPQHAAP-RGWLRLRLLNGCNARSLNFATSDNRP 83 (165)
T ss_dssp TTTEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBS--SCEEEEE-EEEEEEEEEECCSSCCEEEEETTCCC
T ss_pred CCCcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCcc--cceEecc-CcEEEEEEEEcccCceeeEEecCCCe
Confidence 4679999999999887554310 00001123467899999999 8999986 679999999999999999998 6899
Q ss_pred eEEEEecCccC-CCCccCeEEEcCCceEEEEEEeCCCCcceEEEEE
Q 011178 186 MLLVEVEGTHT-LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVIS 230 (491)
Q Consensus 186 ~~via~DG~~~-~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~ 230 (491)
|+|||.||+++ +|..++++.|+|||||||+|++++ .+.+.++..
T Consensus 84 ~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~~~~l 128 (165)
T d1kv7a2 84 LYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVTL 128 (165)
T ss_dssp EEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEEC
T ss_pred EEEEEeCCccccCceEeCeEEECCCCEEEEEEECCC-CCcEEEEEE
Confidence 99999999998 799999999999999999999985 455655543
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.87 E-value=2.3e-23 Score=181.92 Aligned_cols=92 Identities=18% Similarity=0.269 Sum_probs=78.3
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEe
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 79 (491)
|-+++..+||+|++ ||+|+|+|+|+ .+++||||+++.+. +|+..+ +.++|.||++++|+|++ +++||||||
T Consensus 55 ~~~NG~~PGP~I~v~~GD~V~i~l~N~---~~~~~~Hg~~~h~~--~~~~~~~~~~~i~PGet~ty~f~a-~~pGt~~YH 128 (157)
T d2bw4a1 55 MTFNGSVPGPLMVVHENDYVELRLINP---DTNTLLHNIDFHAA--TGALGGGALTQVNPGEETTLRFKA-TKPGVFVYH 128 (157)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTS--CSGGGGGGGCCBCTTEEEEEEEEC-CSCEEEEEE
T ss_pred EEECCccCCceEEEECCcEEEEEEEeC---CCCcceEeeeeccc--CCCcCCcceeeECcCCEEeEEEEC-CCCccceEE
Confidence 45677889999987 48999999996 66889999988765 455555 56779999999999999 589999999
Q ss_pred CCcc----ccccCCceeEEEEecCC
Q 011178 80 PSLA----FHKAAGGYGGIKIASRP 100 (491)
Q Consensus 80 ~H~~----~q~~~Gl~G~liV~~~~ 100 (491)
||.+ .|+.+||+|+|||++++
T Consensus 129 ~H~~~~~~~h~~~Gl~G~~iV~p~e 153 (157)
T d2bw4a1 129 CAPEGMVPWHVTSGMNGAIMVLPRD 153 (157)
T ss_dssp CCCTTCHHHHHHTTCEEEEEEECTB
T ss_pred ECCCCchHHHHhCCCEEEEEEeCCC
Confidence 9953 79999999999999875
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=7e-23 Score=177.12 Aligned_cols=81 Identities=12% Similarity=0.106 Sum_probs=73.3
Q ss_pred EeecCCcEEEEEEEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 365 MAADFRGFAEVVFENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.++.|++|+|.|.|.+. ..||||+||+.|++.+ .++||+.|+|++.++++|+|++||.
T Consensus 61 l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~~~-------------------~~~dt~~i~pg~~~t~~~~a~~pG~ 121 (145)
T d2j5wa2 61 LTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRG-------------------ERRDTANLFPQTSLTLHMWPDTEGT 121 (145)
T ss_dssp CEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETT-------------------EEESEEEECTTCEEEEEECCCSCEE
T ss_pred eEEEcCCeEEEEEEecCCCCcccceEecccEEEecc-------------------cCccceEECCCCEEEEEEEcCCCEe
Confidence 467889999999999754 4599999999998732 2689999999999999999999999
Q ss_pred eeeeecchhhhhcceEEEEEEe
Q 011178 443 WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|+||||+++|++.|||+.|+|.
T Consensus 122 w~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 122 FNVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp EEEEECSHHHHHTTCEEEEEEE
T ss_pred EEEEcCCHHHHhCCCeEEEEEe
Confidence 9999999999999999999985
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=2.8e-23 Score=186.23 Aligned_cols=97 Identities=15% Similarity=0.081 Sum_probs=80.8
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCC----------------------CCCeeeecccCCCCCCCCCCCCC---CC-
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIY----------------------MAPLITLNGVQQRRNSWQDGVYG---TN- 54 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~----------------------~~~siH~HG~~~~~~~~~DG~~~---~q- 54 (491)
|-.+++.+||||++. |+|+|+++|+|+ .+++|||||+++. +.+||.+. ++
T Consensus 48 ~~ynG~~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~~~~~~~~~ 125 (181)
T d1gska1 48 WGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYPEAWFSKD 125 (181)
T ss_dssp EEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCC--GGGSCCTTSCBCGG
T ss_pred EEECCccCCCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeeccccC--CccCCCcccccccC
Confidence 556788999999984 899999999995 3589999999964 56899863 33
Q ss_pred --CCCCCCCeEEEEEEeCCCccceeEeCCcc----ccccCCceeEEEEecCCC
Q 011178 55 --CPIPPGKNFTYVLQVKDQIGSYFYFPSLA----FHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 55 --~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~ 101 (491)
+++.+|++++|+|++.+++||||||||.+ .|+++||+|+|||+++++
T Consensus 126 ~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~~ 178 (181)
T d1gska1 126 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 178 (181)
T ss_dssp GSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred cccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCccc
Confidence 44566788899999976789999999974 799999999999998754
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.86 E-value=2.2e-22 Score=172.71 Aligned_cols=83 Identities=14% Similarity=0.186 Sum_probs=73.9
Q ss_pred eecCCcEEEEEEEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 366 AADFRGFAEVVFENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 366 ~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+..|+.|+|.|.|.+. ..||||+||+.|.+.+.+ +.++||+.|+||++.+++|++++||.|
T Consensus 55 ~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~~~~----------------~~~~dt~~i~pg~~~t~~~~~~~pG~w 118 (139)
T d1sddb2 55 RMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWW 118 (139)
T ss_dssp EEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEE
T ss_pred ccccCCcEEEEEEecCCCCCcccEEEcceEEEeccCC----------------CCcCCeEEECCCCEEEEEEecCCCEeE
Confidence 45779999999999764 459999999999875543 347899999999999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEe
Q 011178 444 NIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~ 464 (491)
+||||+++|++.|||+.|.|.
T Consensus 119 ~~HcH~~~H~~~GM~~~~~V~ 139 (139)
T d1sddb2 119 LLDTEVGEIQRAGMQTPFLIV 139 (139)
T ss_dssp EEECCCHHHHTTTCEEEEEEE
T ss_pred EEEeCCHHHHhccCcEEEEEC
Confidence 999999999999999999884
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.86 E-value=2e-22 Score=175.23 Aligned_cols=94 Identities=21% Similarity=0.221 Sum_probs=77.2
Q ss_pred CCCcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|..++..+||+|++ ||+|+|+|+|+ ..++||||+++.+..+.||.. +++.|.||++++|+|++ +++|||||||
T Consensus 49 ~~~Ng~~pGP~i~v~~Gd~v~v~~~N~---~~~~~~H~~~~h~~~~~~~~~-~~~~i~PG~t~~y~f~a-~~~Gt~~YH~ 123 (151)
T d1kbva1 49 WTFDGDVPGRMIRVREGDTVEVEFSNN---PSSTVPHNVDFHAATGQGGGA-AATFTAPGRTSTFSFKA-LQPGLYIYHC 123 (151)
T ss_dssp EEETTBSSCCBEEEETTCEEEEEEEEC---TTCSSCBCCEETTCCSGGGGT-TTTCBCTTEEEEEEEEC-CSCEEEEEEC
T ss_pred EEECCccCCCeEEEECCCEEEEEEEcC---CCCceeeeccccccccCCCCc-ceeeeCCCCEEEEEEeC-CCCeEEEEEC
Confidence 55677889999987 48999999997 445777777766665566543 57789999999999999 5899999999
Q ss_pred Ccc---ccccCCceeEEEEecCCC
Q 011178 81 SLA---FHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 81 H~~---~q~~~Gl~G~liV~~~~~ 101 (491)
|.. .|+++||+|+|||++++.
T Consensus 124 H~~~~~~h~~~Gm~G~liV~p~~~ 147 (151)
T d1kbva1 124 AVAPVGMHIANGMYGLILVEPKEG 147 (151)
T ss_dssp CCSSHHHHHHTTCEEEEEEECTTC
T ss_pred CCCChHHHHhCCCEEEEEEECCCC
Confidence 965 599999999999998653
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.8e-22 Score=180.67 Aligned_cols=96 Identities=16% Similarity=0.203 Sum_probs=79.3
Q ss_pred CcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCC----CCCCCCCCCC---CCCCCCCCCeEEEEEEeCC----
Q 011178 5 NHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQR----RNSWQDGVYG---TNCPIPPGKNFTYVLQVKD---- 71 (491)
Q Consensus 5 ~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~----~~~~~DG~~~---~q~~i~PG~~~~Y~f~~~~---- 71 (491)
.+...+||+|++ ||+|+|+|+|+++.+++|||||+++. +..+.||+.. ++++|+||++|+|+|++++
T Consensus 69 ~~~G~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p 148 (192)
T d2j5wa1 69 VWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSP 148 (192)
T ss_dssp GGGTTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSC
T ss_pred cccCCcCCeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCcccc
Confidence 344567888765 57888889999999999999999864 3445666643 5789999999999999964
Q ss_pred -----CccceeEeCCcc--ccccCCceeEEEEecCC
Q 011178 72 -----QIGSYFYFPSLA--FHKAAGGYGGIKIASRP 100 (491)
Q Consensus 72 -----~~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~ 100 (491)
++||||||||.+ .|+++||+|+|||+++.
T Consensus 149 ~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g 184 (192)
T d2j5wa1 149 GEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKD 184 (192)
T ss_dssp CTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTT
T ss_pred ccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEccCC
Confidence 368999999986 59999999999999875
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.86 E-value=1e-23 Score=175.15 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=55.5
Q ss_pred EeecCCcEEEEEEEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 365 MAADFRGFAEVVFENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.++.|++|+|.|.|.+. ..||||+||+.|++. +.++||+.|+|++..+++|++++||.
T Consensus 37 ~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~~-------------------~~~~dtv~i~pg~~~~v~~~a~~pG~ 97 (116)
T d1sdda2 37 ITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQN-------------------HHKISAITLVSATSTTANMTVSPEGR 97 (116)
T ss_dssp CCCCCC------BBCCCSSSCEECCBCSSTTCEET-------------------TEECSCCCEETTCCBC--------CC
T ss_pred eEEeCCCEEEEEEeccccCCCceeEEEeccccccC-------------------CcccceEeecccEEEEEEEEcCCCeE
Confidence 456889999999999753 469999999999872 23789999999999999999999999
Q ss_pred eeeeecchhhhhcceEEEE
Q 011178 443 WNIRSENWARQYLGQQFYL 461 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~ 461 (491)
|+||||+++|++.|||+.+
T Consensus 98 w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 98 WTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCCBCCSTTTGGGTCBCCC
T ss_pred EEEEcCCHHHHHccceecC
Confidence 9999999999999999853
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=5.9e-22 Score=174.09 Aligned_cols=87 Identities=23% Similarity=0.391 Sum_probs=74.2
Q ss_pred CcccCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCcc--------
Q 011178 5 NHFSSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIG-------- 74 (491)
Q Consensus 5 ~~~~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~G-------- 74 (491)
-|...+||+|++ ||+|+|+|+|+++.++||||||+.+... + +++|+||++|+|+|+++++.|
T Consensus 79 ~~lg~lGP~IraevGD~i~V~f~N~a~~p~SiH~HGv~~~~~--~------~~~v~PGet~tY~w~v~~~~gp~~~d~~c 150 (179)
T d2j5wa4 79 EHLGILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS--T------VTPTLPGETLTYVWKIPERSGAGTEDSAC 150 (179)
T ss_dssp GGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEESSCBCSCS--C------CCCBCTTCEEEEEEECCGGGSCCTTSCSE
T ss_pred cccCccCCeEEEECCCEEEEEEEeCCCCCEeEeeccccCCCC--C------CCcccCCccEEEEEEecCccCCccCCCCc
Confidence 366778999975 6899999999999999999999986433 3 456899999999999975454
Q ss_pred -ceeEeCCcc--ccccCCceeEEEEecC
Q 011178 75 -SYFYFPSLA--FHKAAGGYGGIKIASR 99 (491)
Q Consensus 75 -t~wYH~H~~--~q~~~Gl~G~liV~~~ 99 (491)
|||||||+. .|+++||+|+|||+.+
T Consensus 151 ~t~~YHShv~~~~d~~sGL~GplIVc~k 178 (179)
T d2j5wa4 151 IPWAYYSTVDQVKDLYSGLIGPLIVCRR 178 (179)
T ss_dssp EEEEEECCTTHHHHHHTTCEEEEEEECC
T ss_pred eeEEEecCCCcHHHhhCCCeEEEEEEeC
Confidence 999999997 6889999999999975
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.85 E-value=4.1e-22 Score=173.21 Aligned_cols=93 Identities=20% Similarity=0.217 Sum_probs=74.0
Q ss_pred CCCcccCCCCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 3 WMNHFSSLGCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 3 ~~~~~~~~G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
|-+++..+||+|++. |+|+|+|+|++. .+..||||++ +...+||... ..+|.||++++|+|++ +++|||||||
T Consensus 53 ~t~NG~~PGPti~v~~Gd~v~i~~~N~~~-~~~~H~~~~h--~~~~~~~~~~-~~~i~PG~t~ty~f~a-~~~Gt~~YH~ 127 (153)
T d1mzya1 53 MTFDGSIPGPLMIVHEGDYVELTLINPPE-NTMPHNIDFH--AATGALGGGG-LTLINPGEKVVLRFKA-TRAGAFVYHC 127 (153)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEECTT-CCSCBCCEET--TSCSGGGGGG-GCCBCTTEEEEEEEEC-CSCEEEEEEC
T ss_pred EEECCCcCCCcEEEeCCCEEEEEEEcCCC-CceEccCccc--cCCcCCCCCc-cccccCCCEEEEEEEc-CCCceEEEEe
Confidence 446778899999874 899999999844 4556666665 3434555443 4579999999999999 6999999999
Q ss_pred Ccc-----ccccCCceeEEEEecCC
Q 011178 81 SLA-----FHKAAGGYGGIKIASRP 100 (491)
Q Consensus 81 H~~-----~q~~~Gl~G~liV~~~~ 100 (491)
|.+ .|+++||+|+|||++++
T Consensus 128 H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 128 APGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp CCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred CCcccccHhHHhCCCEEEEEEecCC
Confidence 964 58999999999999875
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.85 E-value=9.8e-22 Score=170.53 Aligned_cols=93 Identities=18% Similarity=0.157 Sum_probs=78.8
Q ss_pred EeecCCcEEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 365 MAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
+.++.|++|+|.|.|.. ...||||+||++|+++...++.+. ..++||+.|+||++++++|+|++||.|
T Consensus 53 l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v~~~G~~~~-----------~~~~~T~~v~pg~~~~~~f~a~~PG~y 121 (151)
T d1kbva2 53 LKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLI-----------NENVQSTIVPAGGSAIVEFKVDIPGNY 121 (151)
T ss_dssp EEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCE-----------ECSBSEEEECTTEEEEEEEEECSCEEE
T ss_pred eEEEeCCeEEEEEEcCCccccccceeecceeeEEecCCCcCC-----------cccceeEecccCceeEEeeecCCCceE
Confidence 67899999999999964 467999999999999977543221 136799999999999999999999999
Q ss_pred eeeecch-hhhhcceEEEEEEecCCc
Q 011178 444 NIRSENW-ARQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 444 ~~HCHil-~H~d~GMm~~~~V~~~~~ 468 (491)
+||||++ +|+++|||..|.|..+++
T Consensus 122 ~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 122 TLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp EEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEECCcHHHHHhccCeEEEEEcCCCC
Confidence 9999986 457999999999976643
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=2.5e-21 Score=167.78 Aligned_cols=82 Identities=13% Similarity=0.233 Sum_probs=73.4
Q ss_pred EeecCCcEEEEEEEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 365 MAADFRGFAEVVFENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.++.|+.|+|.|.|.+. ..||||+||+.|.+ ++.++||+.|+|+++.+++|++++||.
T Consensus 62 l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~-------------------~~~~~dt~~i~pg~~~~v~f~~~~pG~ 122 (146)
T d1kcwa2 62 LSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN-------------------KNYRIDTINLFPATLFDAYMVAQNPGE 122 (146)
T ss_dssp CEEETTEEEEEEEECCCSTTCCEEEEETTSCCCC-------------------SSSCCSEEEECTTCEEEEEEEECSCEE
T ss_pred ceEecCCeEEEEEEEcCCCCcccceEeeeeeeec-------------------cCCCcceEEecCCCEEEEEEEcCCCee
Confidence 467889999999999764 45999999998842 245899999999999999999999999
Q ss_pred eeeeecchhhhhcceEEEEEEec
Q 011178 443 WNIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~~ 465 (491)
|+||||++.|++.|||+.|+|.+
T Consensus 123 w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 123 WMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp EEEEECCHHHHHTCCEEEEEEEC
T ss_pred EEEEcCCHHHHhcCCeEEEEEEe
Confidence 99999999999999999999963
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.73 E-value=3.1e-18 Score=149.22 Aligned_cols=89 Identities=17% Similarity=0.027 Sum_probs=71.9
Q ss_pred CCCCeEEE--eeeEEEEEEecC---CCCCeeeecccCCCC--CCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeC
Q 011178 9 SLGCSLIT--HLYTHLVVLNFI---YMAPLITLNGVQQRR--NSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFP 80 (491)
Q Consensus 9 ~~G~~l~v--~d~v~i~~~N~l---~~~~siH~HG~~~~~--~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 80 (491)
.+||+|+| ||+|+|+|+|.. +.+..||+||..... ....++.+. .++.+.||++++|+|++++++|||||||
T Consensus 57 ~~~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~f~~~~~pGty~YhC 136 (153)
T d1e30a_ 57 KKNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNFTWHPTAGTYYYVC 136 (153)
T ss_dssp EESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEEEEECCCSEEEEEEC
T ss_pred CcCCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEEEEeCCCCeEEEEeC
Confidence 46899987 489999999974 356678888876432 122333444 6789999999999999878899999999
Q ss_pred CccccccCCceeEEEEe
Q 011178 81 SLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 81 H~~~q~~~Gl~G~liV~ 97 (491)
|...|+.+||+|.|||+
T Consensus 137 h~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 137 QIPGHAATGQFGKIVVK 153 (153)
T ss_dssp CSTTTTTTTCEEEEEEC
T ss_pred CchhHHHCCCEEEEEEC
Confidence 99999999999999996
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.69 E-value=5.2e-17 Score=141.11 Aligned_cols=92 Identities=16% Similarity=0.088 Sum_probs=75.5
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCce--eeEEeCCCCEEEEEEEccCc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISR--CTVQVYPKSWTAVYVPLDNV 440 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~r--DTv~v~p~~~~~irf~adnp 440 (491)
..++++.|++|.++..|. ...|+|||||++|.+|... |.+ .+++.+ +|+.|++++.+.+.|++++|
T Consensus 66 ~~l~akvGErV~i~~~~~-n~~s~fHliG~hFD~V~~~-G~~----------~~~p~~~~qTv~VppG~a~~ve~~f~~P 133 (173)
T d2bw4a2 66 HALTAAVGERVLVVHSQA-NRDTRPHLIGGHGDYVWAT-GKF----------RNPPDLDQETWLIPGGTAGAAFYTFRQP 133 (173)
T ss_dssp GCEEEETTCEEEEEEEES-SSCBCEEEETCCEEEEETT-CCT----------TSCCEEEESCCCBCTTEEEEEEEECCSC
T ss_pred cCcccccCCeEEEEecCC-CCCccceeccceeEEECCC-Ccc----------cCCCcCCceeEEccCCccEEEEEEecCc
Confidence 347889999997765554 4679999999999999875 432 234444 59999999999999999999
Q ss_pred ceeeeeecc-hhhhhcceEEEEEEecC
Q 011178 441 GMWNIRSEN-WARQYLGQQFYLRVYSS 466 (491)
Q Consensus 441 G~w~~HCHi-l~H~d~GMm~~~~V~~~ 466 (491)
|.|+||||. .+|++.|||..|+|..+
T Consensus 134 G~y~~v~H~l~ea~~~G~~g~l~V~G~ 160 (173)
T d2bw4a2 134 GVYAYVNHNLIEAFELGAAGHFKVTGE 160 (173)
T ss_dssp EEEEEEESSHHHHHTTSCEEEEEEESC
T ss_pred eEEEEEechHHHHHhCCCEEEEEEcCC
Confidence 999999996 57999999999999644
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.64 E-value=3.5e-16 Score=135.60 Aligned_cols=92 Identities=15% Similarity=0.053 Sum_probs=76.7
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCcee--eEEeCCCCEEEEEEEccCcc
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRC--TVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rD--Tv~v~p~~~~~irf~adnpG 441 (491)
.++++.|++|.++. +.....++|||||.+|..|-.+ |. +.+++.+| |+.|++++.+.+.|+++.||
T Consensus 67 ~l~akvGe~Vri~~-~~~N~~ssfHlIG~hfD~V~~~-G~----------~~n~p~~~~qT~~V~pG~~~~v~~tf~~PG 134 (177)
T d1oe1a2 67 ALTAKVGETVLLIH-SQANRDTRPHLIGGHGDWVWET-GK----------FANPPQRDLETWFIRGGSAGAALYTFKQPG 134 (177)
T ss_dssp CEEEETTCEEEEEE-EESSSCBCEEETTCCEEEEETT-CC----------TTSCCEEEESBCCBCTTEEEEEEEECCSCE
T ss_pred CcccccCCeEEEEe-cCCCCCccceecccccceEccC-Ce----------eCCCCCcCceeEEecCCccEEEEEEecCce
Confidence 46789999998854 4446789999999999998764 43 23556665 99999999999999999999
Q ss_pred eeeeeecch-hhhhcceEEEEEEecCC
Q 011178 442 MWNIRSENW-ARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 442 ~w~~HCHil-~H~d~GMm~~~~V~~~~ 467 (491)
.|+||||.| +|++.|||+.|+|..+.
T Consensus 135 ~Y~fV~H~L~ea~~~Ga~g~l~V~G~~ 161 (177)
T d1oe1a2 135 VYAYLNHNLIEAFELGAAGHIKVEGKW 161 (177)
T ss_dssp EEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEEEecHHHHHHhcCCeEEEEecCCC
Confidence 999999965 68999999999997543
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.53 E-value=2.1e-15 Score=109.64 Aligned_cols=46 Identities=24% Similarity=0.486 Sum_probs=41.0
Q ss_pred CCCCCCeEEEEEEeCCCcc---------ceeEeCCcc--ccccCCceeEEEEecCCC
Q 011178 56 PIPPGKNFTYVLQVKDQIG---------SYFYFPSLA--FHKAAGGYGGIKIASRPL 101 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~G---------t~wYH~H~~--~q~~~Gl~G~liV~~~~~ 101 (491)
+|+||++|+|+|++++..| |||||||.+ .|+.+||+|+|||+++..
T Consensus 2 ~V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~ 58 (67)
T d1sddb1 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGT 58 (67)
T ss_dssp CBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred cCCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCC
Confidence 5899999999999986565 999999997 599999999999998753
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.51 E-value=4.7e-15 Score=128.72 Aligned_cols=91 Identities=11% Similarity=-0.076 Sum_probs=74.4
Q ss_pred EEeecCCcEEEEEEEcCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEE-ccCcc
Q 011178 364 VMAADFRGFAEVVFENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVP-LDNVG 441 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~-adnpG 441 (491)
.+.++.|++|+|.|.|.+. +.||||||.+.+.+...... ....+...++..+.||+...++|. ++.||
T Consensus 61 ti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~----------~~~~~~~~~~~~v~pg~~~~~~f~~~~~pG 130 (153)
T d1e30a_ 61 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI----------DPIVAGTGFSPVPKDGKFGYTNFTWHPTAG 130 (153)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCC----------CSEEEEBCCCCCCBTTEEEEEEEEECCCSE
T ss_pred eEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccc----------cccCCCccceeeecCCCEEEEEEEeCCCCe
Confidence 4789999999999999764 67999999987755444221 112234678888999999999997 58999
Q ss_pred eeeeeecchhhhhcceEEEEEEe
Q 011178 442 MWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|.||||+..|...||+..|.|+
T Consensus 131 ty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 131 TYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEC
T ss_pred EEEEeCCchhHHHCCCEEEEEEC
Confidence 99999999999999999999873
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.51 E-value=6.6e-15 Score=125.40 Aligned_cols=85 Identities=16% Similarity=0.138 Sum_probs=70.5
Q ss_pred CCCCeEEEeeeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCcccc
Q 011178 9 SLGCSLITHLYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFH 85 (491)
Q Consensus 9 ~~G~~l~v~d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 85 (491)
.++-++++||.|+++|.|... ..+++||||...... .+|... .+++|.||++++|+|++ +++|+||||||...+
T Consensus 51 ~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~--~~~~~~~dt~~i~pg~~~t~~~~~-~~pG~w~~HcH~~~H 127 (139)
T d1sddb2 51 LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLEN--GTQQHQLGVWPLLPGSFKTLEMKA-SKPGWWLLDTEVGEI 127 (139)
T ss_dssp CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEEC--SSSCEEESSEEECTTEEEEEEEEC-CSSEEEEEECCCHHH
T ss_pred CCccccccCCcEEEEEEecCCCCCcccEEEcceEEEec--cCCCCcCCeEEECCCCEEEEEEec-CCCEeEEEEeCCHHH
Confidence 455666677888999999754 568999999875332 455544 66889999999999999 589999999999999
Q ss_pred ccCCceeEEEE
Q 011178 86 KAAGGYGGIKI 96 (491)
Q Consensus 86 ~~~Gl~G~liV 96 (491)
...||+|.++|
T Consensus 128 ~~~GM~~~~~V 138 (139)
T d1sddb2 128 QRAGMQTPFLI 138 (139)
T ss_dssp HTTTCEEEEEE
T ss_pred HhccCcEEEEE
Confidence 99999999998
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.50 E-value=5.1e-14 Score=121.28 Aligned_cols=135 Identities=25% Similarity=0.360 Sum_probs=105.9
Q ss_pred CCcceEEeeecccCCHH--------HHHHHHhcCCCCCCCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcCCCCeEe
Q 011178 110 AGDFTILAGDWYKKNHT--------DLKAILDSGSDLPFPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVGISTSIN 178 (491)
Q Consensus 110 ~~e~~l~l~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~~~~~~~ 178 (491)
|+|++|+.+|||..... .....+. ..++.+++||+... ...|+++.||++||+|+|++....+.
T Consensus 1 Drey~l~~~e~Y~~~~~~~~~~~~~d~~~~~~-----~~p~~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~ 75 (151)
T d1kbva2 1 DKEFYIVQGDFYTKGKKGAQGLQPFDMDKAVA-----EQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSS 75 (151)
T ss_dssp SEEEEEEEEEECBSSCTTCCEEECBCHHHHHH-----TCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEE
T ss_pred CceEEEeccEEecCCcCCCCcCCccCHhHHhc-----CCCcEEEECCccCCccCccceEEEeCCeEEEEEEcCCcccccc
Confidence 68999999999975321 1111111 24688999998741 23599999999999999998888899
Q ss_pred EEEeCceeEEEEecCccCCCCccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 179 FRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 179 ~~i~~~~~~via~DG~~~~p~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
||++|+.|.++..||........+++.+.||+++.+.++++ .||.|++.++...........++|.+.+..
T Consensus 76 ~H~hG~~f~~v~~~G~~~~~~~~~T~~v~pg~~~~~~f~a~-~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~ 146 (151)
T d1kbva2 76 FHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAE 146 (151)
T ss_dssp EEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred ceeecceeeEEecCCCcCCcccceeEecccCceeEEeeecC-CCceEEEECCcHHHHHhccCeEEEEEcCCC
Confidence 99999999999999998755567999999999999999999 589999998853221123568888887654
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=9.8e-14 Score=119.19 Aligned_cols=83 Identities=11% Similarity=0.037 Sum_probs=66.7
Q ss_pred CCeEEEeeeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccC
Q 011178 11 GCSLITHLYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 88 (491)
Q Consensus 11 G~~l~v~d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 88 (491)
+-++++||+|+++|.|... ..+++|+||...... +.....++|.||++++|+|++ +++|+||||||...++..
T Consensus 61 ~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~~----~~~~dt~~i~pg~~~~v~f~~-~~pG~w~~HCH~~~H~~~ 135 (146)
T d1kcwa2 61 GLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNK----NYRIDTINLFPATLFDAYMVA-QNPGEWMLSCQNLNHLKA 135 (146)
T ss_dssp CCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCCS----SSCCSEEEECTTCEEEEEEEE-CSCEEEEEEECCHHHHHT
T ss_pred cceEecCCeEEEEEEEcCCCCcccceEeeeeeeecc----CCCcceEEecCCCEEEEEEEc-CCCeeEEEEcCCHHHHhc
Confidence 3444556788888999754 568999999875432 222234779999999999999 689999999999999999
Q ss_pred CceeEEEEec
Q 011178 89 GGYGGIKIAS 98 (491)
Q Consensus 89 Gl~G~liV~~ 98 (491)
||+|.++|++
T Consensus 136 GM~~~~~V~~ 145 (146)
T d1kcwa2 136 GLQAFFQVQE 145 (146)
T ss_dssp CCEEEEEEEC
T ss_pred CCeEEEEEEe
Confidence 9999999974
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=1.1e-13 Score=119.30 Aligned_cols=84 Identities=14% Similarity=0.093 Sum_probs=68.9
Q ss_pred CeEEEeeeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccC
Q 011178 12 CSLITHLYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAA 88 (491)
Q Consensus 12 ~~l~v~d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 88 (491)
-+++.||+|+++|.|... ..+++|+||..... ..+|.+. ..+.|.||++.+|+|++ +.+|+||||||...+...
T Consensus 62 l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~--~~~g~~~~dtv~i~pg~~~~~~~~a-~~pG~w~~HCHi~~H~~~ 138 (149)
T d2j5wa5 62 LTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQY--KHRGVYSSDVFDIFPGTYQTLEMFP-RTPGIWLLHCHVTDHIHA 138 (149)
T ss_dssp CEEETTCEEEEEEEECCSTTCCEEEEESSCCEEE--TTTTCEEESEEEECTTCEEEEEECC-CSCEEEEEEECCHHHHHT
T ss_pred eEEEcCCcEEEEEEecCCCCCccceEEEeeEeee--eccCCCCcceEEECCCceEEEEEeC-CCCeeEEEEcCCHHHHhc
Confidence 344445667777999864 57999999986533 2567665 56789999999999999 689999999999999999
Q ss_pred CceeEEEEec
Q 011178 89 GGYGGIKIAS 98 (491)
Q Consensus 89 Gl~G~liV~~ 98 (491)
||.|.++|.+
T Consensus 139 GM~~~f~V~~ 148 (149)
T d2j5wa5 139 GMETTYTVLQ 148 (149)
T ss_dssp TCEEEEEEEC
T ss_pred cCceEEEEec
Confidence 9999999975
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.39 E-value=7.9e-13 Score=110.65 Aligned_cols=90 Identities=18% Similarity=0.083 Sum_probs=66.9
Q ss_pred EeecCCcEEEEEEEcCCC-CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 365 MAADFRGFAEVVFENPED-TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
+.++.|+.|+|.+.|... ..+-+|.||.++ .... +.. .....++..|.||+..+.+|.+++||.|
T Consensus 36 i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~--~~~~---~~~---------~~~~~~~~~I~PG~s~~y~f~a~~~Gt~ 101 (129)
T d1aoza1 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQ--RGTP---WAD---------GTASISQCAINPGETFFYNFTVDNPGTF 101 (129)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCC--TTCG---GGS---------CCBTTTBCCBCTTCEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEeCCCCCCeeeeecccee--eccC---ccc---------cccccccceECCCCEEEEEEECCCCCce
Confidence 678899999999999743 345566666653 1111 100 0111234458899999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEecCCc
Q 011178 444 NIRSENWARQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~~~~ 468 (491)
+||||...|...||+..+.|.++++
T Consensus 102 ~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 102 FYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp EEEECSTTTGGGTCEEEEEEECCTT
T ss_pred EEecCCHHHHhCCCEEEEEEcCCCC
Confidence 9999999999999999999987754
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=3.5e-13 Score=115.41 Aligned_cols=82 Identities=11% Similarity=-0.019 Sum_probs=65.0
Q ss_pred CeEEEeeeEEEEEEecCC--CCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCC
Q 011178 12 CSLITHLYTHLVVLNFIY--MAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAG 89 (491)
Q Consensus 12 ~~l~v~d~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 89 (491)
-+++.||+|++.+.|... ..+++|+||..... ++.....+.|.||++.+|+|++ +.+|+||||||...++..|
T Consensus 61 l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~----~~~~~dt~~i~pg~~~t~~~~a-~~pG~w~~HCH~~~H~~~G 135 (145)
T d2j5wa2 61 LTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW----RGERRDTANLFPQTSLTLHMWP-DTEGTFNVECLTTDHYTGG 135 (145)
T ss_dssp CEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE----TTEEESEEEECTTCEEEEEECC-CSCEEEEEEECSHHHHHTT
T ss_pred eEEEcCCeEEEEEEecCCCCcccceEecccEEEe----cccCccceEECCCCEEEEEEEc-CCCEeEEEEcCCHHHHhCC
Confidence 344445677777999654 56899999986432 2222234679999999999999 6899999999999999999
Q ss_pred ceeEEEEec
Q 011178 90 GYGGIKIAS 98 (491)
Q Consensus 90 l~G~liV~~ 98 (491)
|.|.++|+.
T Consensus 136 M~~~~~V~~ 144 (145)
T d2j5wa2 136 MKQKYTVNQ 144 (145)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEec
Confidence 999999973
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.30 E-value=1.6e-12 Score=111.89 Aligned_cols=82 Identities=11% Similarity=0.039 Sum_probs=63.8
Q ss_pred EEeecCCcEEEEEEEcCC--CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcc
Q 011178 364 VMAADFRGFAEVVFENPE--DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG 441 (491)
++.++.|++|+|.+.|.. ...|.+|+||.... .+. ...-.|.||+..+++|++++||
T Consensus 63 ti~v~~Gd~v~i~~~N~~~~~~~H~~~~h~~~~~-----~~~----------------~~~~~i~PG~t~ty~f~a~~~G 121 (153)
T d1mzya1 63 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGA-----LGG----------------GGLTLINPGEKVVLRFKATRAG 121 (153)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSG-----GGG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred cEEEeCCCEEEEEEEcCCCCceEccCccccCCcC-----CCC----------------CccccccCCCEEEEEEEcCCCc
Confidence 367899999999999953 45688999986421 010 0112478999999999999999
Q ss_pred eeeeeec-----chhhhhcceEEEEEEecC
Q 011178 442 MWNIRSE-----NWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 442 ~w~~HCH-----il~H~d~GMm~~~~V~~~ 466 (491)
.|+|||| +..|...||+..+.|.+.
T Consensus 122 t~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~ 151 (153)
T d1mzya1 122 AFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 151 (153)
T ss_dssp EEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred eEEEEeCCcccccHhHHhCCCEEEEEEecC
Confidence 9999999 456899999999988544
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.29 E-value=2.2e-12 Score=107.93 Aligned_cols=82 Identities=15% Similarity=0.072 Sum_probs=64.9
Q ss_pred cCCCCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc-c
Q 011178 8 SSLGCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-F 84 (491)
Q Consensus 8 ~~~G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~ 84 (491)
.-.+++|+| ||+|+|+|+|.......+|+|++...+ + +..+.||++.+|+|++ +++||||||||.- .
T Consensus 48 ~f~p~~i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~~~~------~---~~~~~PG~~~~~~F~a-~~~G~y~~~C~~~cg 117 (132)
T d1fwxa1 48 SFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYG------V---AMEIGPQMTSSVTFVA-ANPGVYWYYCQWFCH 117 (132)
T ss_dssp EESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT------E---EEEECTTCEEEEEEEC-CSCEEEEEECCSCCS
T ss_pred cccCCEEEEcCCCEEEEEEEcCCCCccceEeechhhhc------c---ccccCCCEEEEEEEeC-CCCeEEEEECccccC
Confidence 345677777 588999999998888899999996422 1 2347899999999999 5999999999953 2
Q ss_pred cccCCceeEEEEecC
Q 011178 85 HKAAGGYGGIKIASR 99 (491)
Q Consensus 85 q~~~Gl~G~liV~~~ 99 (491)
....||.|.|||+++
T Consensus 118 ~~H~~M~G~iiVePk 132 (132)
T d1fwxa1 118 ALHMEMRGRMLVEPK 132 (132)
T ss_dssp TTCTTCEEEEEEECC
T ss_pred cchhcCEEEEEEEcC
Confidence 223699999999974
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=2.5e-13 Score=111.55 Aligned_cols=74 Identities=16% Similarity=0.045 Sum_probs=48.0
Q ss_pred EeeeEEEEEEecC--CCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeE
Q 011178 16 THLYTHLVVLNFI--YMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGG 93 (491)
Q Consensus 16 v~d~v~i~~~N~l--~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~ 93 (491)
.||.|++.|.|.. +..+++|+||.... .+|....+.+|.||++++|+|++ +.+|+||||||...+...||+|.
T Consensus 41 ~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~----~~~~~~dtv~i~pg~~~~v~~~a-~~pG~w~~HCH~~~H~~~GM~a~ 115 (116)
T d1sdda2 41 AHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHKISAITLVSATSTTANMTV-SPEGRWTIASLIPRHFQAGMQAY 115 (116)
T ss_dssp CC------BBCCCSSSCEECCBCSSTTCE----ETTEECSCCCEETTCCBC---------CCCCCBCCSTTTGGGTCBCC
T ss_pred CCCEEEEEEeccccCCCceeEEEeccccc----cCCcccceEeecccEEEEEEEEc-CCCeEEEEEcCCHHHHHccceec
Confidence 3455566699965 45689999999753 23333345779999999999999 58999999999999999999986
Q ss_pred E
Q 011178 94 I 94 (491)
Q Consensus 94 l 94 (491)
|
T Consensus 116 i 116 (116)
T d1sdda2 116 I 116 (116)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.22 E-value=1.2e-11 Score=106.29 Aligned_cols=81 Identities=12% Similarity=0.034 Sum_probs=59.2
Q ss_pred EeecCCcEEEEEEEcCCCC--CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 365 MAADFRGFAEVVFENPEDT--LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~--~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.++.|+.++|.+.|.... .|.+|+|+... +.+. ...+. |.||++.+.+|++++||.
T Consensus 60 i~v~~Gd~v~v~~~N~~~~~~~H~~~~h~~~~-----~~~~--------------~~~~~--i~PG~t~~y~f~a~~~Gt 118 (151)
T d1kbva1 60 IRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG--------------AAATF--TAPGRTSTFSFKALQPGL 118 (151)
T ss_dssp EEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG--------------TTTTC--BCTTEEEEEEEECCSCEE
T ss_pred EEEECCCEEEEEEEcCCCCceeeecccccccc-----CCCC--------------cceee--eCCCCEEEEEEeCCCCeE
Confidence 6789999999999996433 34555554321 1111 01122 678999999999999999
Q ss_pred eeeeecc---hhhhhcceEEEEEEecC
Q 011178 443 WNIRSEN---WARQYLGQQFYLRVYSS 466 (491)
Q Consensus 443 w~~HCHi---l~H~d~GMm~~~~V~~~ 466 (491)
|+||||. ..|.++||+..+.|.+.
T Consensus 119 ~~YH~H~~~~~~h~~~Gm~G~liV~p~ 145 (151)
T d1kbva1 119 YIYHCAVAPVGMHIANGMYGLILVEPK 145 (151)
T ss_dssp EEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred EEEECCCCChHHHHhCCCEEEEEEECC
Confidence 9999994 56999999999988533
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.19 E-value=1.1e-11 Score=100.87 Aligned_cols=73 Identities=15% Similarity=0.140 Sum_probs=57.5
Q ss_pred CeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCC
Q 011178 12 CSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAG 89 (491)
Q Consensus 12 ~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 89 (491)
++|+| ||+|+|+++|....++++++|+... +..+.||++.+|+|++ +++||||||||.+-. ..|
T Consensus 38 ~~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~------------~~~~~pG~t~~~~f~~-~~~G~y~y~C~~~~~-~~~ 103 (112)
T d1ibya_ 38 ETLVVKKGDAVKVVVENKSPISEGFSIDAFGV------------QEVIKAGETKTISFTA-DKAGAFTIWCQLHPK-NIH 103 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCT-TTB
T ss_pred CEEEEeCCCEEEEEEEeCCCCceeeeeccccc------------ccccCCcceEEEEEEe-ccceEEEEECcccCh-hhc
Confidence 45655 4788999999977777777777532 2347899999999999 689999999997533 467
Q ss_pred ceeEEEEec
Q 011178 90 GYGGIKIAS 98 (491)
Q Consensus 90 l~G~liV~~ 98 (491)
|.|.|||.+
T Consensus 104 M~G~i~V~e 112 (112)
T d1ibya_ 104 LPGTLNVVE 112 (112)
T ss_dssp CCEEEEEEC
T ss_pred CeEEEEEEC
Confidence 999999974
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.17 E-value=1.2e-11 Score=106.81 Aligned_cols=82 Identities=16% Similarity=0.121 Sum_probs=61.7
Q ss_pred EEeecCCcEEEEEEEcCC--CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcc
Q 011178 364 VMAADFRGFAEVVFENPE--DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG 441 (491)
++.++.|+.|+|.|.|.. ...|.+|+|+... +.+. ...-.|.||+..+++|++++||
T Consensus 65 ~I~v~~GD~V~i~l~N~~~~~~~Hg~~~h~~~~-----~~~~----------------~~~~~i~PGet~ty~f~a~~pG 123 (157)
T d2bw4a1 65 LMVVHENDYVELRLINPDTNTLLHNIDFHAATG-----ALGG----------------GALTQVNPGEETTLRFKATKPG 123 (157)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCS-----GGGG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred eEEEECCcEEEEEEEeCCCCcceEeeeecccCC-----CcCC----------------cceeeECcCCEEeEEEECCCCc
Confidence 367899999999999954 2346666666431 1110 0111378999999999999999
Q ss_pred eeeeeec----chhhhhcceEEEEEEecC
Q 011178 442 MWNIRSE----NWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 442 ~w~~HCH----il~H~d~GMm~~~~V~~~ 466 (491)
.|+|||| +..|...||...+.|.+.
T Consensus 124 t~~YH~H~~~~~~~h~~~Gl~G~~iV~p~ 152 (157)
T d2bw4a1 124 VFVYHCAPEGMVPWHVTSGMNGAIMVLPR 152 (157)
T ss_dssp EEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred cceEEECCCCchHHHHhCCCEEEEEEeCC
Confidence 9999999 678999999999988544
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.15 E-value=1.4e-10 Score=100.04 Aligned_cols=140 Identities=13% Similarity=0.096 Sum_probs=105.6
Q ss_pred CCCCcceEEeeecccCCH-----------H-HHHHHHhcCCCCCCCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcC
Q 011178 108 PPAGDFTILAGDWYKKNH-----------T-DLKAILDSGSDLPFPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVG 172 (491)
Q Consensus 108 ~~~~e~~l~l~d~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~ 172 (491)
.||+++.+.-+|+|...+ . ...+.++. .....|+++++||+... .-.++++.||+| ||+|++
T Consensus 6 ~yD~~~y~~~~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~-m~~~~Pt~vvFNG~v~altg~~~l~akvGErV--~i~~~~ 82 (173)
T d2bw4a2 6 TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALTGDHALTAAVGERV--LVVHSQ 82 (173)
T ss_dssp CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEE--EEEEEE
T ss_pred ccceEEEecccEeecCCCCCCCccCcCChhhcchhHHHH-HhccCCCEEEECCCccccccccCcccccCCeE--EEEecC
Confidence 459999999999996221 1 11111110 12346899999997641 135999999966 678888
Q ss_pred CCCeEeEEEeCceeEEEEecCccCCCC--ccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 173 ISTSINFRIQGHKMLLVEVEGTHTLQN--TYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 173 ~~~~~~~~i~~~~~~via~DG~~~~p~--~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
..+..+||+.|+.|.++..+|.+..+. ..+++.|.+|+++.+.++++ .||.|.+.++...........++|.+.+..
T Consensus 83 ~n~~s~fHliG~hFD~V~~~G~~~~~p~~~~qTv~VppG~a~~ve~~f~-~PG~y~~v~H~l~ea~~~G~~g~l~V~G~~ 161 (173)
T d2bw4a2 83 ANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFELGAAGHFKVTGEW 161 (173)
T ss_dssp SSSCBCEEEETCCEEEEETTCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CCCCccceeccceeEEECCCCcccCCCcCCceeEEccCCccEEEEEEec-CceEEEEEechHHHHHhCCCEEEEEEcCCC
Confidence 888999999999999999999988543 35799999999999999999 689999999864332224578999998765
Q ss_pred C
Q 011178 251 G 251 (491)
Q Consensus 251 ~ 251 (491)
.
T Consensus 162 ~ 162 (173)
T d2bw4a2 162 N 162 (173)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.15 E-value=2e-11 Score=105.95 Aligned_cols=90 Identities=14% Similarity=-0.034 Sum_probs=70.0
Q ss_pred EeecCCcEEEEEEEcCC-CCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 365 MAADFRGFAEVVFENPE-DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
+.++.|+.|+|.+.|.. ...+.+|.||.++.......|. +.......++++++...+|.++.+|.|
T Consensus 69 I~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~-------------~~~~~~~i~~pg~~~~y~f~~~~~Gt~ 135 (162)
T d2q9oa1 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGA-------------NGVTECPIPPKGGQRTYRWRARQYGTS 135 (162)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC-------------BTTTBCCBCTTTEEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEecCcccccccccccccccCCCcCCCC-------------cccccceecCCCCEEEeeecCCCCEEE
Confidence 67889999999999965 3568899999976432222111 111223346789999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEecCC
Q 011178 444 NIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
+||||+..|...||...+.|.+++
T Consensus 136 wYH~H~~~q~~~Gl~G~~iV~~p~ 159 (162)
T d2q9oa1 136 WYHSHFSAQYGNGVVGTIQINGPA 159 (162)
T ss_dssp EEEECSTTGGGGTCEEEEEEECCC
T ss_pred EeecCCHHHHhCCCEEEEEECCCC
Confidence 999999999999999999997664
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.10 E-value=4.7e-11 Score=103.10 Aligned_cols=82 Identities=15% Similarity=0.145 Sum_probs=63.7
Q ss_pred EeecCCcEEEEEEEcCCC--CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 365 MAADFRGFAEVVFENPED--TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.++.|+.++|.|.|... .+|.||+||..+.+ .+. .+ -.|.||+..+++|+++.||.
T Consensus 67 I~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~~~~~----~g~-------~~----------~~I~PG~t~ty~f~a~~~Gt 125 (159)
T d1oe2a1 67 LVVHEGDYVQLTLVNPATNAMPHNVEFHGATGAL----GGA-------KL----------TNVNPGEQATLRFKADRSGT 125 (159)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG----GGG-------GG----------CCBCTTEEEEEEEECCSCEE
T ss_pred EEEECCcEEEEEEECCCccccccceeeccccCCC----CCc-------cc----------ccCCCCCeEEEEEEcCCCce
Confidence 678999999999999754 35778888865311 110 00 02789999999999999999
Q ss_pred eeeeec----chhhhhcceEEEEEEecCC
Q 011178 443 WNIRSE----NWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 443 w~~HCH----il~H~d~GMm~~~~V~~~~ 467 (491)
|.|||| +..|...||...+.|.+.+
T Consensus 126 ~~yH~H~~~~~~~q~~~Gl~G~liV~p~e 154 (159)
T d1oe2a1 126 FVYHCAPEGMVPWHVVSGMSGTLMVLPRD 154 (159)
T ss_dssp EEEECCCTTCHHHHHHTTCEEEEEEECTT
T ss_pred EEEEeCCCCCchhHHhCCCEEEEEEECCC
Confidence 999999 5679999999999885433
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=99.05 E-value=9.7e-11 Score=99.18 Aligned_cols=99 Identities=9% Similarity=-0.157 Sum_probs=69.9
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEee-------ccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEE
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGM-------DGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVP 436 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~-------g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~ 436 (491)
.++++.|+.|+|+|.|.+.+.||.+++...+..... ..+.... .....-......+|..+.|++...|+|+
T Consensus 33 ~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~v~~~t~~~~pg~s~~i~f~ 110 (139)
T d1qhqa_ 33 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADAL--FVPPPDTPNALAWTAMLNAGESGSVTFR 110 (139)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGT--TCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred eEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhc--cccCCCcccccccccccCCcceEEEEEe
Confidence 368899999999999998777665554322211000 0000000 0000111235678999999999999999
Q ss_pred ccCcceeeeeecchhhhhcceEEEEEEe
Q 011178 437 LDNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 437 adnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
++.||.|.||||+.-|++.||...+.|.
T Consensus 111 ~~~~G~y~f~Ct~pgH~~~GM~G~i~V~ 138 (139)
T d1qhqa_ 111 TPAPGTYLYICTFPGHYLAGMKGTLTVT 138 (139)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cCCCeEEEEEcCCcCcccccCeEEEEEc
Confidence 9999999999999999999999999885
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.05 E-value=1.5e-09 Score=93.51 Aligned_cols=139 Identities=17% Similarity=0.116 Sum_probs=106.2
Q ss_pred CCCCcceEEeeecccCCHH------------HHHHHHhcCCCCCCCceEEEcCcCCC---cceEEEeCCCEEEEEEEEcC
Q 011178 108 PPAGDFTILAGDWYKKNHT------------DLKAILDSGSDLPFPDGLVINGRGSN---ANTFTVDQGKTYRFRISNVG 172 (491)
Q Consensus 108 ~~~~e~~l~l~d~~~~~~~------------~~~~~~~~~~~~~~~~~~~vNG~~~~---~~~~~v~~g~~~rlR~iN~~ 172 (491)
.+|+++.+.-+|+|...++ ...+.++. .....|+++++||+... ...++++.||+|| |++++
T Consensus 6 ~yD~~yyv~e~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~-m~~~~P~~vvFNG~~galt~~~~l~akvGe~Vr--i~~~~ 82 (177)
T d1oe1a2 6 HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTGANALTAKVGETVL--LIHSQ 82 (177)
T ss_dssp CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEE--EEEEE
T ss_pred ccceEEEecccEeecCCCCCCCccccCChhhcchhHHHH-HhccCCcEEEECCccccccCCCCcccccCCeEE--EEecC
Confidence 4599999999999973211 11111110 01247899999998652 3479999999885 57888
Q ss_pred CCCeEeEEEeCceeEEEEecCccCCCC--ccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcceEEEEEecCCC
Q 011178 173 ISTSINFRIQGHKMLLVEVEGTHTLQN--TYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSA 250 (491)
Q Consensus 173 ~~~~~~~~i~~~~~~via~DG~~~~p~--~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 250 (491)
..+..+||+.|+.|..+..+|.+..+. .++++.|.||++..+.++++ .||.|.+.++...........|+|.+.+..
T Consensus 83 ~N~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~-~PG~Y~fV~H~L~ea~~~Ga~g~l~V~G~~ 161 (177)
T d1oe1a2 83 ANRDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFELGAAGHIKVEGKW 161 (177)
T ss_dssp SSSCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CCCCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEec-CceEEEEEecHHHHHHhcCCeEEEEecCCC
Confidence 899999999999999999999988553 35799999999999999998 689999999865432234678999998765
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.02 E-value=6.7e-10 Score=92.29 Aligned_cols=89 Identities=12% Similarity=0.054 Sum_probs=66.2
Q ss_pred EeecCCcEEEEEEEcCCC-----CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc-c
Q 011178 365 MAADFRGFAEVVFENPED-----TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-D 438 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~-----~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a-d 438 (491)
+.++.|+.|++.+.|... ..|-+|+||...- ... +. + .+..-....|.||++.+.+|++ +
T Consensus 36 I~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~--~~~---~~-d--------~~~~~s~~~i~PG~s~~Y~~~~~~ 101 (130)
T d1gyca1 36 ITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQA--GTN---WA-D--------GPAFVNQCPIASGHSFLYDFHVPD 101 (130)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT--TCG---GG-S--------CCBTTTBCCBCTTEEEEEEEECSS
T ss_pred EEEECCeEEEEEEEecCCCcccCCceeEEecccccc--ccC---CC-C--------CccccccCCCCCCCeEEEEEECCC
Confidence 678999999999999854 4577888886541 110 00 0 0011112248899999999997 6
Q ss_pred CcceeeeeecchhhhhcceEEEEEEecCC
Q 011178 439 NVGMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 439 npG~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
.+|.|.||||...|...||...+.|.+|+
T Consensus 102 ~~Gt~wYH~H~~~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCceeEEecCCHHHHhCCCEEEEEEeCCC
Confidence 79999999999999999999999998763
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.99 E-value=5.4e-10 Score=90.56 Aligned_cols=74 Identities=15% Similarity=0.161 Sum_probs=62.4
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|+|+|.|.+...|+|++|++.. +..+.||+...++|+++.||.|
T Consensus 39 ~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~---------------------------~~~~~pG~t~~~~f~~~~~G~y 91 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFGV---------------------------QEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEeCCCCceeeeeccccc---------------------------ccccCCcceEEEEEEeccceEE
Confidence 4788999999999999988889999998633 2346789999999999999999
Q ss_pred eeeecchhhhhcceEEEEEEec
Q 011178 444 NIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~~ 465 (491)
.||||+.-| ..||...+.|.+
T Consensus 92 ~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 92 TIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCT-TTBCCEEEEEEC
T ss_pred EEECcccCh-hhcCeEEEEEEC
Confidence 999998444 467999998864
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.96 E-value=5.1e-10 Score=93.03 Aligned_cols=90 Identities=13% Similarity=0.051 Sum_probs=67.3
Q ss_pred EEeecCCcEEEEEEEcCCC-----CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEE-c
Q 011178 364 VMAADFRGFAEVVFENPED-----TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVP-L 437 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~-----~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~-a 437 (491)
++.++.|+.++|.+.|..+ ..|.||+||.++.. ..+... .. ---...|+||+..+.+|+ +
T Consensus 35 ~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~-----~~~~dg-v~--------g~~~~~I~PG~~~~y~~~~~ 100 (131)
T d1hfua1 35 LIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRG-----TNWADG-AD--------GVNQCPISPGHAFLYKFTPA 100 (131)
T ss_dssp EEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTT-----CGGGSC-CB--------TTTBCCBCTTCEEEEEECCT
T ss_pred eEEEECCCEEEEEEEECCCCccccccceEEeCCcccCC-----CCCCCC-Cc--------ccccceECCCCeEEEEEeCC
Confidence 4678999999999999653 35899999965411 111100 00 011235789999999998 5
Q ss_pred cCcceeeeeecchhhhhcceEEEEEEecCC
Q 011178 438 DNVGMWNIRSENWARQYLGQQFYLRVYSSA 467 (491)
Q Consensus 438 dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 467 (491)
+.+|.|.||||...|...||...+.|.+++
T Consensus 101 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 101 GHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp TCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 889999999999999999999999997654
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=1.3e-09 Score=91.65 Aligned_cols=87 Identities=11% Similarity=0.019 Sum_probs=68.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc-c
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV-G 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp-G 441 (491)
.++.++.|+.|++.+.|.....|.||+||.+. -...+|. + + ..++||+..+.+|.++.+ |
T Consensus 46 P~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~--~~~~dG~-------------~---~-~~i~pg~~~~y~~~~~~~aG 106 (140)
T d1kv7a1 46 PAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV--PGEVDGG-------------P---Q-GIIPPGGKRSVTLNVDQPAA 106 (140)
T ss_dssp CEEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCC-------------T---T-CCBCTTCEEEEEEECCSCSE
T ss_pred ceEEEECCCEEEEEEEeCccccccEeeeeeec--CCccCCC-------------c---c-ceEccCCceeEEEEEecCCe
Confidence 34788999999999999999999999999753 1111121 0 0 127799999999999875 9
Q ss_pred eeeeeecc----hhhhhcceEEEEEEecCCc
Q 011178 442 MWNIRSEN----WARQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 442 ~w~~HCHi----l~H~d~GMm~~~~V~~~~~ 468 (491)
.+.||||. ..|...||+..+.|.++|+
T Consensus 107 t~wyH~H~~~~~~~~~~~Gl~G~liV~~~e~ 137 (140)
T d1kv7a1 107 TCWFHPHQHGKTGRQVAMGLAGLVVIEDDEI 137 (140)
T ss_dssp EEEEECCCTTTHHHHHHTTCCEEEEEECHHH
T ss_pred eEEEEECCCCChHHHHhCCCeEEEEECCccc
Confidence 99999996 4688899999999977653
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.86 E-value=1.9e-08 Score=85.46 Aligned_cols=146 Identities=16% Similarity=0.110 Sum_probs=109.8
Q ss_pred cCCCCCCCCCCCCCcceEEeeecccCCH-----------H-HHHHHHhcCCCCCCCceEEEcCcCCC---cceEEEeCCC
Q 011178 98 SRPLIPVPFDPPAGDFTILAGDWYKKNH-----------T-DLKAILDSGSDLPFPDGLVINGRGSN---ANTFTVDQGK 162 (491)
Q Consensus 98 ~~~~~~~~~~~~~~e~~l~l~d~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~vNG~~~~---~~~~~v~~g~ 162 (491)
+.+..+.. +|+|+.|+-+|+|...+ . ...+.++. .....|+..++||+... .-.++++.||
T Consensus 3 d~~g~~l~---yDr~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~e~-m~~l~PthVVFNG~vgaltg~~aL~AkvGE 78 (178)
T d1mzya2 3 DHEGKPVR---YDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALTGEGALKAKVGD 78 (178)
T ss_dssp CTTSCBCC---CSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTSGGGCEEEETTC
T ss_pred CCCCCccc---cCeEEEEecceeecCCCCCCCccccCChhhcchhHHHH-HHccCCCEEEECCccCcccCCCCcccccCC
Confidence 33444444 49999999999996221 1 11111111 12346899999998752 2479999999
Q ss_pred EEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC--CccCeEEEcCCceEEEEEEeCCCCcceEEEEEeeccCCCcce
Q 011178 163 TYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ--NTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA 240 (491)
Q Consensus 163 ~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p--~~~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~ 240 (491)
+| ||+|++..+.-+||+-|..|.-+-.+|.+..+ ..++++.|.+|+..-+++++. .||.|.+..+.....-...+
T Consensus 79 tV--~~~~~gpN~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~-~PG~Y~~VdH~l~~A~~kGA 155 (178)
T d1mzya2 79 NV--LFVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGA 155 (178)
T ss_dssp EE--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCC
T ss_pred eE--EEecccCCCCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeC-CCeEEEEEccHHHHHHhCCC
Confidence 87 57999999999999999999877789998754 346899999999999999999 58999999987544323467
Q ss_pred EEEEEecCCC
Q 011178 241 TSVLHYSNSA 250 (491)
Q Consensus 241 ~ail~y~~~~ 250 (491)
.|+|.+.+..
T Consensus 156 ~g~l~V~G~~ 165 (178)
T d1mzya2 156 TAHVLVEGEW 165 (178)
T ss_dssp EEEEEEESCC
T ss_pred eEEEEeCCCC
Confidence 8999998765
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=1.3e-09 Score=96.86 Aligned_cols=96 Identities=14% Similarity=0.026 Sum_probs=72.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEcc----
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLD---- 438 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~ad---- 438 (491)
+++.++.|+++.|+|.|....+|.||.||..+.....+....+ ......+.+..|+||+..+.+|.+.
T Consensus 76 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~d--------g~~~~~~~~~~v~PG~t~tY~~~~~~~~~ 147 (192)
T d2j5wa1 76 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPD--------NTTDFQRADDKVYPGEQYTYMLLATEEQS 147 (192)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCC--------CCCGGGTGGGCBCTTCEEEEEEECCSTTS
T ss_pred CeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCC--------CCCCCCcccCcccCCCEEEEEEEccCccc
Confidence 4588999999999999999899999999998754333211111 1112234555789999999999874
Q ss_pred ------Ccceeeeeecc--hhhhhcceEEEEEEecC
Q 011178 439 ------NVGMWNIRSEN--WARQYLGQQFYLRVYSS 466 (491)
Q Consensus 439 ------npG~w~~HCHi--l~H~d~GMm~~~~V~~~ 466 (491)
++|.|+||||+ ..|..+||+..+.|..+
T Consensus 148 p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~ 183 (192)
T d2j5wa1 148 PGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKK 183 (192)
T ss_dssp CCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECT
T ss_pred cccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEccC
Confidence 35799999997 45888999999988654
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.77 E-value=5.6e-09 Score=86.59 Aligned_cols=79 Identities=10% Similarity=0.105 Sum_probs=59.3
Q ss_pred CCeEEE--eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc-cccc
Q 011178 11 GCSLIT--HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-FHKA 87 (491)
Q Consensus 11 G~~l~v--~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~ 87 (491)
.++|+| ||+|.+.++|.....-.+|..++...+ + +..+.||++.+++|++ +++|+|||||+.- ....
T Consensus 50 p~~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~------v---~~~~~PG~t~~~~f~~-~~~G~y~~~C~~~cg~~H 119 (131)
T d1qnia1 50 MTDFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHG------V---SMEISPQQTASVTFTA-GKPGVYWYYCNWFCHALH 119 (131)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT------E---EEEECTTCEEEEEEEC-CSSEEEEEECCSCCSTTG
T ss_pred cceEEecCCCEEEEEEEccCCCCcceEEEEEeccC------c---ccccCCCceEEEEEEc-CCCEEEEEECccccCcch
Confidence 355655 578899999988777777777774321 1 2337899999999999 6999999999852 2223
Q ss_pred CCceeEEEEecC
Q 011178 88 AGGYGGIKIASR 99 (491)
Q Consensus 88 ~Gl~G~liV~~~ 99 (491)
.||.|.|+|+++
T Consensus 120 ~~M~g~i~Vepa 131 (131)
T d1qnia1 120 MEMVGRMLVEAA 131 (131)
T ss_dssp GGCEEEEEEECC
T ss_pred hcCeeEEEEEeC
Confidence 589999999973
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.74 E-value=1.3e-08 Score=85.65 Aligned_cols=85 Identities=15% Similarity=0.098 Sum_probs=58.4
Q ss_pred eEEE--eeeEEEEEEecC--CCCCeeeecccC------------------CCCCCCCCCCCCCCCCCCCCCeEEEEEEeC
Q 011178 13 SLIT--HLYTHLVVLNFI--YMAPLITLNGVQ------------------QRRNSWQDGVYGTNCPIPPGKNFTYVLQVK 70 (491)
Q Consensus 13 ~l~v--~d~v~i~~~N~l--~~~~siH~HG~~------------------~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~ 70 (491)
+|+| |++|++.|+|.- +.+++++.-... ....+.++.+......+.||++.+++|+++
T Consensus 33 ~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i~f~~~ 112 (139)
T d1qhqa_ 33 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTP 112 (139)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEECC
T ss_pred eEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEEEEecC
Confidence 4444 467788899975 345665543321 011111222222224589999999999996
Q ss_pred CCccceeEeCCccccccCCceeEEEEec
Q 011178 71 DQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 71 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
++|+||||||.-.+...||.|.|+|.+
T Consensus 113 -~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 113 -APGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp -SSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred -CCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 899999999998889999999999974
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.74 E-value=1.9e-08 Score=87.97 Aligned_cols=89 Identities=21% Similarity=0.299 Sum_probs=70.4
Q ss_pred ceEEEcCcCCC--cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccCCC---CccCeEEEcCCceEEEEE
Q 011178 142 DGLVINGRGSN--ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQ---NTYDSLDIHLGQSYSVLV 216 (491)
Q Consensus 142 ~~~~vNG~~~~--~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~~p---~~~~~l~l~pGeR~dv~v 216 (491)
..++|||+.++ .|.++++.|+++||||+|.+....+.|+|+|+.|+|++.+|....+ ...|++.+.+|+ ..++|
T Consensus 71 ~~~tING~~f~~~~p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v~~~~-~~v~v 149 (181)
T d1kv7a3 71 HANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNV-SEVLV 149 (181)
T ss_dssp GCEEETTBCCCTTCCSEECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEESSSE-EEEEE
T ss_pred cceeECCEecCCCCCceEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCccccCCcceeEEEeCCCc-eEEEE
Confidence 46899999973 5779999999999999999987789999999999999999987743 346899997664 34555
Q ss_pred EeCC---CCcceEEEEEe
Q 011178 217 RADQ---PPQGYYIVIST 231 (491)
Q Consensus 217 ~~~~---~~g~~~i~~~~ 231 (491)
++.. .+|.|.+.++.
T Consensus 150 ~f~~~~~~~G~w~fHCHi 167 (181)
T d1kv7a3 150 KFNHDAPKEHAYMAHCHL 167 (181)
T ss_dssp CCCSCCCGGGCEEEEESS
T ss_pred EEEeeCCCCCeEEEeCCh
Confidence 4432 24778777664
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.63 E-value=6.5e-08 Score=80.48 Aligned_cols=90 Identities=11% Similarity=0.033 Sum_probs=66.6
Q ss_pred EeecCCcEEEEEEEcCCC-----CCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc-c
Q 011178 365 MAADFRGFAEVVFENPED-----TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-D 438 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~-----~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a-d 438 (491)
+.++.|+.+++.+.|... ..+-+|.||.+.- +. .+ .+ ....-....|+||+..+.+|.+ +
T Consensus 36 i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~--~~---~~-~d--------gv~~~t~~~I~PG~~~~Y~~~~~~ 101 (136)
T d1v10a1 36 ITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQA--GT---TE-MD--------GPAFVNQCPIIPNESFVYDFVVPG 101 (136)
T ss_dssp EEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCT--TC---GG-GS--------CCBTTTBCCBCTTEEEEEEEECTT
T ss_pred EEEECCcEEEEEEEeCCCCcccCcceeEEecccccc--cc---cc-cC--------CCCccccceECCCCeEEEEEECCC
Confidence 678899999999999754 3467999995320 11 00 00 0001112347899999999998 5
Q ss_pred CcceeeeeecchhhhhcceEEEEEEecCCc
Q 011178 439 NVGMWNIRSENWARQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 439 npG~w~~HCHil~H~d~GMm~~~~V~~~~~ 468 (491)
.+|.|.||||...|...||...+.|.++++
T Consensus 102 ~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d 131 (136)
T d1v10a1 102 QAGTYWYHSHLSTQYCDGLRGAFVVYDPND 131 (136)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred CccceEEecCchhHHhCCCEEEEEECCCcc
Confidence 699999999999999999999999987765
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.60 E-value=5.3e-08 Score=80.72 Aligned_cols=76 Identities=11% Similarity=0.029 Sum_probs=60.7
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~ 444 (491)
+.++.|+.|.|.|.|.+...|.+|-|+-. +. .--..+.||....++|+|+.||.|.
T Consensus 54 i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~----~~--------------------~~~~~~~PG~~~~~~F~a~~~G~y~ 109 (132)
T d1fwxa1 54 FTVKEGDEVTVIVTNLDEIDDLTHGFTMG----NY--------------------GVAMEIGPQMTSSVTFVAANPGVYW 109 (132)
T ss_dssp EEEETTCEEEEEEEECCCSTTCCEEEEET----TT--------------------TEEEEECTTCEEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEcCCCCccceEeechh----hh--------------------ccccccCCCEEEEEEEeCCCCeEEE
Confidence 67899999999999998777877664221 11 1223577899999999999999999
Q ss_pred eeecchhhh-hcceEEEEEEe
Q 011178 445 IRSENWARQ-YLGQQFYLRVY 464 (491)
Q Consensus 445 ~HCHil~H~-d~GMm~~~~V~ 464 (491)
||||..-|. +.||...+.|.
T Consensus 110 ~~C~~~cg~~H~~M~G~iiVe 130 (132)
T d1fwxa1 110 YYCQWFCHALHMEMRGRMLVE 130 (132)
T ss_dssp EECCSCCSTTCTTCEEEEEEE
T ss_pred EECccccCcchhcCEEEEEEE
Confidence 999987776 58999999774
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.36 E-value=1.8e-07 Score=81.64 Aligned_cols=96 Identities=13% Similarity=-0.024 Sum_probs=67.2
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC---
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN--- 439 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn--- 439 (491)
+++.++.|+.|.++|.|....++.||.||..+-....+..-.+.. .+.-.-...|+||++.+.+|.+..
T Consensus 60 P~Ira~~GD~i~V~f~N~~~~~~siH~HG~~~~~~~~~~~~~d~~--------~~~~~~~~~V~PGet~tY~w~v~~~~g 131 (180)
T d1sdda1 60 PTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHT--------LPMEKMDDAVAPGQEYTYEWIISEHSG 131 (180)
T ss_dssp CCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCC--------CHHHHTTTCBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCcEEeeEEEeCCCCCccccccccccccccccccccccC--------CCCCccccccCCCCEEEEEEEeCCccc
Confidence 458899999999999999888999999998652211110000000 000011124889999999999842
Q ss_pred -------cceeeeeecchh--hhhcceEEEEEEecC
Q 011178 440 -------VGMWNIRSENWA--RQYLGQQFYLRVYSS 466 (491)
Q Consensus 440 -------pG~w~~HCHil~--H~d~GMm~~~~V~~~ 466 (491)
.|.|+||||... |...||...+.|-.+
T Consensus 132 p~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~ 167 (180)
T d1sdda1 132 PTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167 (180)
T ss_dssp CCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECT
T ss_pred CccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccC
Confidence 379999999744 778899999988654
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.34 E-value=9.9e-07 Score=74.99 Aligned_cols=89 Identities=13% Similarity=0.079 Sum_probs=71.5
Q ss_pred eEEEcCcCCC-cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCcc----------------C-----CCCc
Q 011178 143 GLVINGRGSN-ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTH----------------T-----LQNT 200 (491)
Q Consensus 143 ~~~vNG~~~~-~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~----------------~-----~p~~ 200 (491)
.++|||+.+. ....+++.|++.+|+|+|.+.. .+.|||+++.|+||+.++.. . ++..
T Consensus 29 ~~~ing~~~~~~~~~~~~~G~~e~W~i~N~~~~-~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (154)
T d1gska3 29 VLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGW 107 (154)
T ss_dssp EEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSC
T ss_pred eEEECCcCcCCCcccccCCCCEEEEEEEeCCCC-CCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcc
Confidence 5899999863 3456788999999999998875 79999999999999877531 1 1223
Q ss_pred cCeEEEcCCceEEEEEEeCCCCcceEEEEEee
Q 011178 201 YDSLDIHLGQSYSVLVRADQPPQGYYIVISTR 232 (491)
Q Consensus 201 ~~~l~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 232 (491)
.|++.+.||+.+.|.+++...+|.|.+.++..
T Consensus 108 kDTv~v~pg~~~~i~~~~~d~pG~w~~HCHil 139 (154)
T d1gska3 108 KDTIQAHAGEVLRIAATFGPYSGRYVWHCHIL 139 (154)
T ss_dssp BSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred cccEEeCCCCEEEEEEEeCCCCcceEEecCcc
Confidence 58999999999999999654789888877654
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.31 E-value=2.1e-07 Score=72.96 Aligned_cols=70 Identities=19% Similarity=0.269 Sum_probs=43.0
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++.|....++.++.+.-........++....+....||.+|+| +. ..+|+|||+|.. +...||.|.|+|+
T Consensus 29 ~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~--tf-~~~G~y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d2plta_ 29 NFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSV--KL-TAAGEYGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEE--EC-CSCEEEEEECGG--GGGGTCEEEEEEC
T ss_pred EEEECCCCceeEEEecCCccccccCCcccccccccCCCceEEE--Ee-cCCceEEEEeCc--CCCCCCEEEEEEC
Confidence 3678777777777766543222111121111222455665555 44 479999999975 5567999999996
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.25 E-value=2e-07 Score=83.78 Aligned_cols=83 Identities=13% Similarity=-0.007 Sum_probs=61.1
Q ss_pred EeeeEEEEEEecC------CCCCeeeecccCCCCCCCCCCC-------------CC--CCCCCCCCCeEEEEEEeCCCcc
Q 011178 16 THLYTHLVVLNFI------YMAPLITLNGVQQRRNSWQDGV-------------YG--TNCPIPPGKNFTYVLQVKDQIG 74 (491)
Q Consensus 16 v~d~v~i~~~N~l------~~~~siH~HG~~~~~~~~~DG~-------------~~--~q~~i~PG~~~~Y~f~~~~~~G 74 (491)
.|+.|+|.+.|.- ...+.+|.||.+...-...+|. +. --..|.||+..+.+|++ +.+|
T Consensus 85 ~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a-dnpG 163 (214)
T d1aoza3 85 IGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA-DNPG 163 (214)
T ss_dssp TTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC-CSCE
T ss_pred CCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec-CCCe
Confidence 3578899999953 4678999999754210001111 00 01238899999999999 6899
Q ss_pred ceeEeCCccccccCCceeEEEEecC
Q 011178 75 SYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 75 t~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
.|.||||...+...||...|+|...
T Consensus 164 ~w~~HCH~~~H~~~GM~~~~~v~~~ 188 (214)
T d1aoza3 164 VWAFHCHIEPHLHMGMGVVFAEGVE 188 (214)
T ss_dssp EEEEEESSHHHHHTTCEEEEEECGG
T ss_pred eEEEEECcHHHHhCcCcEEEEEccc
Confidence 9999999999999999998888654
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.25 E-value=1.3e-07 Score=75.30 Aligned_cols=73 Identities=18% Similarity=0.260 Sum_probs=48.5
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCC--CC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEec
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGV--YG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~--~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
++.|.-..++++.......... ...+. .. ....+.||+++.+.|+.+..+|+|||+|.. +...||.|.|+|++
T Consensus 30 ~f~n~~~~~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~C~~--H~~~GM~G~I~Veg 105 (105)
T d2q5ba1 30 KWVNNKLPPHNILFDDKQVPGA-SKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP--HRGAGMVGKITVEG 105 (105)
T ss_dssp EEEECSSCCEEEEECGGGSGGG-CHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECST--TGGGTCEEEEEECC
T ss_pred EEEECCCCCceeEeecCccccc-ccccCCccccccccccCCceEEEEEEeccCCceEEEEeCC--CCCCCCEEEEEEcC
Confidence 3677766666665554321110 00000 01 224478999999999987789999999975 56679999999984
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.19 E-value=1.1e-06 Score=77.45 Aligned_cols=86 Identities=15% Similarity=0.076 Sum_probs=59.0
Q ss_pred CCeEEEe--eeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCC-CC-------CCCCCCC-eEEEEEEeCCCccceeEe
Q 011178 11 GCSLITH--LYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TN-------CPIPPGK-NFTYVLQVKDQIGSYFYF 79 (491)
Q Consensus 11 G~~l~v~--d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q-------~~i~PG~-~~~Y~f~~~~~~Gt~wYH 79 (491)
+..+.++ +.++|++.| ..++.+|.||.....-...++... .. ..|+||+ +..++|.+ +.+|.|.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~--~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~a-dnpG~w~~H 147 (190)
T d1v10a3 71 GAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVT-DNPGPWFLH 147 (190)
T ss_dssp TTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEEC-CSCEEEEEE
T ss_pred ceeEEccCccEEEEEecc--CccccccccCceEEEEEcCCCcccccccCcccCEEEeCCCeEEEEEEEEc-CCCeeEEEe
Confidence 4445554 466776666 457889999996421111111111 11 2277765 66799999 689999999
Q ss_pred CCccccccCCceeEEEEecC
Q 011178 80 PSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 80 ~H~~~q~~~Gl~G~liV~~~ 99 (491)
||...+...||...|++..+
T Consensus 148 CHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 148 CHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp ESCHHHHTTTCEEEEEESGG
T ss_pred cCchhhhhCCCcEEEEECCC
Confidence 99999999999999988653
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.17 E-value=1.1e-06 Score=78.09 Aligned_cols=101 Identities=13% Similarity=0.019 Sum_probs=67.6
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcc-
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG- 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG- 441 (491)
+++.++.|++++|+|.|....++.||.||..+.--. .|.+-..... ....+...-.-.|.||+..+.+|.+...+
T Consensus 86 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~--dg~~~~~~~~--~~~~~~~~~~~~V~PGet~tY~w~v~~~~g 161 (207)
T d2j5wa3 86 PVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNN--EGTYYSPNYN--PQSRSVPPSASHVAPTETFTYEWTVPKEVG 161 (207)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGG--CSBCCBCC---------CCCCSSCBCTTCEEEEEEECCGGGS
T ss_pred ceEEEECCCEEEEEEEECCCCCccccccccccCccc--ccccccCCCC--cccCCcCcccceecCCCEEEEEEEecCCCC
Confidence 458899999999999999988999999998763211 1211100000 00001111223478999999999985433
Q ss_pred ---------eeeeeecchh--hhhcceEEEEEEecCC
Q 011178 442 ---------MWNIRSENWA--RQYLGQQFYLRVYSSA 467 (491)
Q Consensus 442 ---------~w~~HCHil~--H~d~GMm~~~~V~~~~ 467 (491)
.|+||||... |...||...+.|-.++
T Consensus 162 P~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g 198 (207)
T d2j5wa3 162 PTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKG 198 (207)
T ss_dssp CCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTT
T ss_pred CccCCCCceeEEEccCCChhHhhccCceEEEEEccCC
Confidence 7999999854 4477999999886553
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.08 E-value=7.9e-06 Score=67.08 Aligned_cols=74 Identities=11% Similarity=0.098 Sum_probs=57.4
Q ss_pred EeecCCcEEEEEEEcCCCC---CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcc
Q 011178 365 MAADFRGFAEVVFENPEDT---LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 441 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~---~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG 441 (491)
+.++.|+.|.+.|.|.... .|-|++.+..+ . ..+.||...++.|.+++||
T Consensus 53 i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v------------------------~---~~~~PG~t~~~~f~~~~~G 105 (131)
T d1qnia1 53 FKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGV------------------------S---MEISPQQTASVTFTAGKPG 105 (131)
T ss_dssp EEEETTCEEEEEEEECCCSTTCCEEEEETTTTE------------------------E---EEECTTCEEEEEEECCSSE
T ss_pred EEecCCCEEEEEEEccCCCCcceEEEEEeccCc------------------------c---cccCCCceEEEEEEcCCCE
Confidence 6789999999999997543 35555543321 1 2366899999999999999
Q ss_pred eeeeeecchhhh-hcceEEEEEEec
Q 011178 442 MWNIRSENWARQ-YLGQQFYLRVYS 465 (491)
Q Consensus 442 ~w~~HCHil~H~-d~GMm~~~~V~~ 465 (491)
.|.+||+..-|. +.+|...+.|.+
T Consensus 106 ~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 106 VYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp EEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEECccccCcchhcCeeEEEEEe
Confidence 999999986665 578999998764
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.05 E-value=8.1e-07 Score=69.52 Aligned_cols=37 Identities=27% Similarity=0.556 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.+.+|++|+|.| +.+|+|+|+|.. +...||.|.|+|+
T Consensus 62 ~~~~g~t~~~tf---~~~G~y~Y~C~~--H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 62 LFAAGESFTSTF---TEPGTYTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp ECSTTCEEEEEC---CSCEEEEEECGG--GTTTTCEEEEEEC
T ss_pred ccCCCcEEEEec---cCCceEEEEecc--CCCCCCEEEEEEC
Confidence 367999888877 469999999965 5667999999996
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=98.04 E-value=3.5e-06 Score=65.86 Aligned_cols=70 Identities=19% Similarity=0.208 Sum_probs=43.7
Q ss_pred EEEecCCCCCeeeecccCCCCC-CCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRN-SWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~-~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|.-..++++.+........ ...++... .+....||++|++.| ..+|+|.|+|- .+...||.|.|+|.
T Consensus 28 ~f~n~~~~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~tF---~~~G~y~Y~C~--pH~~~GM~G~I~V~ 99 (99)
T d1plca_ 28 VFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEEECCCCCccEEEccCcCCCccccccCcccccccccCCCceEEEec---CCCceEEEEeC--CCcCCCcEEEEEEC
Confidence 3678766667766554322110 00000011 233467999888877 36999999994 47789999999983
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=98.01 E-value=2.3e-06 Score=66.81 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=29.6
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
...|++++++.| +.+|+|||+|-. +...||.|.|+|+
T Consensus 62 ~~~~~~~~~~~f---~~~G~y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d1iuza_ 62 LNSKGETVVRKL---STPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp ECSTTCEEEEEC---CSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred ccCCCcEEEEec---CCCceEEEEeCC--CccCCCeEEEEEC
Confidence 356788777665 469999999975 5678999999996
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.00 E-value=6.7e-06 Score=72.78 Aligned_cols=87 Identities=18% Similarity=0.092 Sum_probs=59.8
Q ss_pred CCeEEE--eeeEEEEEEecC---CCCCeeeecccCCCCCCCCCCCCC-CC----------CCCCCCCeEEEEEEeCCCcc
Q 011178 11 GCSLIT--HLYTHLVVLNFI---YMAPLITLNGVQQRRNSWQDGVYG-TN----------CPIPPGKNFTYVLQVKDQIG 74 (491)
Q Consensus 11 G~~l~v--~d~v~i~~~N~l---~~~~siH~HG~~~~~~~~~DG~~~-~q----------~~i~PG~~~~Y~f~~~~~~G 74 (491)
|.++.+ ++.++|.+.|.. ..++.+|.||.....-...+|... .. ..++||+...++|.+ +.+|
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~a-dnpG 147 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQT-DNPG 147 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEEC-CSCE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEEC-CCCe
Confidence 444444 356666666653 456999999986431111222211 11 124799999999999 6899
Q ss_pred ceeEeCCccccccCCceeEEEEec
Q 011178 75 SYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 75 t~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
.|.||||...+...||...|++..
T Consensus 148 ~w~~HCHi~~H~~~GM~~~~~~~~ 171 (199)
T d1gyca3 148 PWFLHCHIDFHLEAGFAIVFAEDV 171 (199)
T ss_dssp EEEEEESSHHHHHTTCEEEEEETH
T ss_pred eEEEEcCchhhHhccCcEEEEEcC
Confidence 999999999999999998876554
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.98 E-value=1.2e-05 Score=69.24 Aligned_cols=79 Identities=20% Similarity=0.161 Sum_probs=62.1
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCc-c
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNV-G 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnp-G 441 (491)
+++.++.|+++.++|.|....++-||.||... ... . |. .|.||+..+-+|.+... |
T Consensus 86 P~IraevGD~i~V~f~N~a~~p~SiH~HGv~~------~~~----------~------~~-~v~PGet~tY~w~v~~~~g 142 (179)
T d2j5wa4 86 PQLHADVGDKVKIIFKNMATRPYSIHAHGVQT------ESS----------T------VT-PTLPGETLTYVWKIPERSG 142 (179)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEESSCBC------SCS----------C------CC-CBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCCEEEEEEEeCCCCCEeEeeccccC------CCC----------C------CC-cccCCccEEEEEEecCccC
Confidence 45889999999999999998999999999853 100 0 11 26799999999987433 2
Q ss_pred ---------eeeeeecch--hhhhcceEEEEEEe
Q 011178 442 ---------MWNIRSENW--ARQYLGQQFYLRVY 464 (491)
Q Consensus 442 ---------~w~~HCHil--~H~d~GMm~~~~V~ 464 (491)
.|+||||.. .+...||...+.|-
T Consensus 143 p~~~d~~c~t~~YHShv~~~~d~~sGL~GplIVc 176 (179)
T d2j5wa4 143 AGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVC 176 (179)
T ss_dssp CCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEE
T ss_pred CccCCCCceeEEEecCCCcHHHhhCCCeEEEEEE
Confidence 799999994 46778999999874
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.97 E-value=2.3e-05 Score=69.21 Aligned_cols=79 Identities=13% Similarity=0.280 Sum_probs=67.2
Q ss_pred cceEEEeCCCEEEEEEEEcCCCCeEeEEEeCceeEEEEecCccC----CCCccCeEEE-cCCceEEEEEEeCCCCcceEE
Q 011178 153 ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT----LQNTYDSLDI-HLGQSYSVLVRADQPPQGYYI 227 (491)
Q Consensus 153 ~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~~~~~via~DG~~~----~p~~~~~l~l-~pGeR~dv~v~~~~~~g~~~i 227 (491)
...+.++.|+.+.+-++|......+.||++||.|+|++.+|... .|...|++.+ .+|+++.+.+.++ .+|.|.+
T Consensus 69 ~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl~~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~ad-npG~w~~ 147 (200)
T d1hfua3 69 GSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFF 147 (200)
T ss_dssp TSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEE
T ss_pred CceEEecCCcceEEEEeeccccccCceeecCCcEEEEeccCCCCCccccCcccceEEeCCCCEEEEEEEECC-CCeeeEE
Confidence 35689999999999999988777899999999999999998743 4566799999 5789999999988 7898888
Q ss_pred EEEee
Q 011178 228 VISTR 232 (491)
Q Consensus 228 ~~~~~ 232 (491)
.++..
T Consensus 148 HCHi~ 152 (200)
T d1hfua3 148 HCHIE 152 (200)
T ss_dssp EESSH
T ss_pred EeCCC
Confidence 88754
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=97.94 E-value=5.3e-06 Score=64.75 Aligned_cols=69 Identities=14% Similarity=0.167 Sum_probs=41.0
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCC-CCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEE
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQD-GVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKI 96 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~D-G~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 96 (491)
+++|.-..++++.+............ +... ......||++|+|.| ..+|+|||+|-. +...||.|.|+|
T Consensus 28 ~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf---~~~G~y~y~C~~--H~~~GM~G~I~V 98 (99)
T d1bypa_ 28 TFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP--HAGAGMVGKVTV 98 (99)
T ss_dssp EEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG--GTTTTCEEEEEE
T ss_pred EEEECCCCceeEEEecCCCCCccccccCcccccccccCCCceEEEEe---cCCceEEEEECc--CCCCCCEEEEEE
Confidence 36787666666555443321110000 0001 223356777777766 379999999965 566799999998
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=97.91 E-value=5.5e-06 Score=63.58 Aligned_cols=62 Identities=23% Similarity=0.401 Sum_probs=41.3
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
++.|.-...+++...+... ..+. ...+.||+++.|.| +.+|+|.|+|.. +...||.|.|+|+
T Consensus 30 ~f~n~d~~~h~~~~~~~~~--~~~~------~~~~~~g~~~~~tF---~~~G~y~Y~C~~--H~~~gM~G~I~Ve 91 (91)
T d1bxua_ 30 QWVNNKLAPHNVVVEGQPE--LSHK------DLAFSPGETFEATF---SEPGTYTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECSSCCEEEEETTCGG--GCEE------EEECSTTCEEEEEC---CSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EEEECCcCCceEEeccccc--cccc------ccccCCCCCEEEEe---ccCceEEEEeCC--CCCCCCEEEEEEC
Confidence 3678766665555444321 0011 12367899888777 469999999975 4556999999996
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=97.87 E-value=2.9e-06 Score=67.08 Aligned_cols=41 Identities=24% Similarity=0.506 Sum_probs=35.7
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEec
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
...|++++++.|++...+|+|||+|-. +...||.|.|+|+.
T Consensus 65 ~~~~~~~~~~~f~~~~~~G~y~y~C~~--H~~~GM~G~I~V~g 105 (105)
T d2cj3a1 65 LMSPGQSTSTTFPADAPAGEYTFYCEP--HRGAGMVGKITVAG 105 (105)
T ss_dssp ECSTTCEEEEECCTTCCSEEEEEECTT--TGGGTCEEEEEECC
T ss_pred ccCCCcceEEEEEeccCCceEEEEeCC--CcCCCcEEEEEEeC
Confidence 368999999999987789999999965 67789999999974
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=97.86 E-value=2e-05 Score=62.14 Aligned_cols=61 Identities=11% Similarity=0.079 Sum_probs=42.2
Q ss_pred EEEecCCCCCeeeecccCCCCCCCCCCCCC-CCCCCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 23 VVLNFIYMAPLITLNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 23 ~~~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++|.-..++++++..- .+|... ....+.||++|+|.| +++|+|.|+|-.| .||.|.|+|+
T Consensus 44 ~f~N~d~~~H~v~~~~~-------~~~~~~~~~~~~~~g~~~~~tf---~~pG~y~y~C~~H----~~M~G~I~Ve 105 (105)
T d2ov0a1 44 TWINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPH----PFMRGKVVVE 105 (105)
T ss_dssp EEEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC----TTCEEEEEEC
T ss_pred EEEECCCCceeEEEecc-------cCCcccccccccCCCceEEEEe---cCCeEEEEEecCC----CCCEEEEEEC
Confidence 36787666666665432 112222 334578999988888 3699999999654 4899999986
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=97.79 E-value=3.2e-05 Score=62.69 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=32.1
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecCC
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 100 (491)
...+|++++|.| +.+|+|.|+|.. +...||.|.|+|.++.
T Consensus 57 ~~~~~~~~~~tF---~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 57 KTTVGQEAVVKF---DKEGVYGFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp BCCTTSCEEEEC---CSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred cccccccccccc---CCCceEEEEecc--CCCCCCEEEEEECCCC
Confidence 356788877776 469999999976 5668999999998754
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=97.77 E-value=2.2e-06 Score=67.40 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=26.8
Q ss_pred CCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 58 PPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 58 ~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.+|.++ +|+. +++|||||+|.. +...||.|.|+|+
T Consensus 68 ~~~~~~--~~~f-~~~G~y~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 68 EDEPSF--KAKV-STPGTYTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp TTBCEE--EECC-CSCEEEEEECST--TGGGTCEEEEEEC
T ss_pred CCccEE--EEee-CCCceEEEEecC--CcccCCeEEEEEC
Confidence 445554 4554 479999999986 5678999999996
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.71 E-value=2.6e-05 Score=67.79 Aligned_cols=93 Identities=10% Similarity=-0.080 Sum_probs=60.4
Q ss_pred EEeecCCcEEEEEEEcCCCC----------------------CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCcee
Q 011178 364 VMAADFRGFAEVVFENPEDT----------------------LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRC 421 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~----------------------~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rD 421 (491)
++.++.|+.+++.+.|.-.. ..-+|+||.+. -...+|.-. . ....+
T Consensus 58 tI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~--~~~~DG~~~--~--------~~~~~ 125 (181)
T d1gska1 58 TIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT--PDDSDGYPE--A--------WFSKD 125 (181)
T ss_dssp BEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCC--CGGGSCCTT--S--------CBCGG
T ss_pred eEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeecccc--CCccCCCcc--c--------ccccC
Confidence 37789999999999996422 23499999653 112122100 0 00011
Q ss_pred e-EEeCCCCEEEEEEEccCc-ceeeeeecc----hhhhhcceEEEEEEecCCc
Q 011178 422 T-VQVYPKSWTAVYVPLDNV-GMWNIRSEN----WARQYLGQQFYLRVYSSAN 468 (491)
Q Consensus 422 T-v~v~p~~~~~irf~adnp-G~w~~HCHi----l~H~d~GMm~~~~V~~~~~ 468 (491)
. -..+.+...+.+|.++.+ |.|.||||. ..|...||...+.|.++++
T Consensus 126 ~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~~ 178 (181)
T d1gska1 126 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 178 (181)
T ss_dssp GSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred cccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCccc
Confidence 1 123345667889988765 888999997 3578899999999987654
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.63 E-value=8.6e-06 Score=73.03 Aligned_cols=41 Identities=17% Similarity=0.351 Sum_probs=37.6
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEec
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
++||+..+.+|.+ +.+|.|.||||...+...||...|+.++
T Consensus 138 v~~~g~~~ir~~a-dnpG~Wl~HCHi~~H~~~GM~~~~~~~p 178 (216)
T d2q9oa3 138 LPAGGWLLLAFRT-DNPGAWLFHCHIAWHVSGGLSVDFLERP 178 (216)
T ss_dssp ECTTSEEEEEEEC-CSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred eCCCCEEEEEEEC-CCCeEEEEEccCCcccccCCeEEEEEcc
Confidence 8899999999999 6899999999999999999998886655
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=97.61 E-value=2.5e-05 Score=60.49 Aligned_cols=36 Identities=31% Similarity=0.632 Sum_probs=27.4
Q ss_pred CCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 57 IPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 57 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
..++++|++.| +.+|+|+|+|-. +...||.|.|+|+
T Consensus 62 ~~~~~~~~~tf---~~~G~y~Y~C~~--H~~~GM~G~I~Ve 97 (97)
T d2jxma1 62 IAPGSFYSVTL---GTPGTYSFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp CSCSCCEEEEC---CSCSEEEEECSS--TTTTTCEEEEEEC
T ss_pred cCcceEEEEec---CCCeEEEEEEcc--CCCCCCEEEEEEC
Confidence 45666665555 479999999954 4567999999996
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.60 E-value=7.1e-05 Score=63.95 Aligned_cols=75 Identities=17% Similarity=0.262 Sum_probs=61.8
Q ss_pred eEEeecCCcEEEEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-c
Q 011178 363 SVMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-V 440 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-p 440 (491)
.+++++.|++++|+|+|.+.. .+.|||+||+|.|++.. |. ...|...|++.|.+|+.+.+.++++. +
T Consensus 55 ~~~~v~~g~~~rlRlina~~~~~~~~~id~H~~~Via~D-G~----------~v~P~~~d~i~i~~GqR~dvlv~~~~~~ 123 (168)
T d1v10a2 55 AVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVD-GV----------SHQPLTVDSLTIFAGQRYSVVVEANQAV 123 (168)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEET-TE----------EEEEEEESBEEECTTCEEEEEEECCSCS
T ss_pred eEEEECCCCEEEEEEEecccCceEEEEECCCeEEEEEeC-Ce----------ecCceEEeEEEEccCceEEEEEECCCCC
Confidence 457899999999999999865 48999999999999985 32 22467889999999999999999964 6
Q ss_pred ceeeeeec
Q 011178 441 GMWNIRSE 448 (491)
Q Consensus 441 G~w~~HCH 448 (491)
|.|-++-.
T Consensus 124 ~~y~ira~ 131 (168)
T d1v10a2 124 GNYWIRAN 131 (168)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEE
Confidence 77655543
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=97.59 E-value=0.00011 Score=59.41 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=31.7
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecCC
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 100 (491)
...++.+|+|.| +.+|+|+|+|=. +...||.|.|+|.++.
T Consensus 57 ~~~~~~~~~~tF---~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 57 KSKINESYTLTV---TEPGLYGVKCTP--HFGMGMVGLVQVGDAP 96 (123)
T ss_dssp BCCTTCCEEEEE---CSCEEEEEECGG--GGGGTCEEEEEESSSC
T ss_pred cccCCcceEEec---cCCCeEEEEEcc--CCCCCCEEEEEECCCC
Confidence 456778877777 469999999965 4667999999997653
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.57 E-value=7.9e-05 Score=58.62 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=29.0
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEe
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
.+.||++|+|.| +++|+|.|+|-.| .||.|.|+|+
T Consensus 72 ~~~~~~~~~~tf---~~~G~y~y~C~~H----~~M~G~I~Ve 106 (106)
T d1id2a_ 72 MMTKDQAYAITF---NEAGSYDYFCTPH----PFMRGKVIVE 106 (106)
T ss_dssp CBCTTEEEEEEE---CSCEEEEEECSSC----TTCEEEEEEC
T ss_pred ccCCCceEEEec---CCCeEEEEEccCC----CCCEEEEEEC
Confidence 367899888877 4799999999765 4899999985
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=97.54 E-value=9.9e-05 Score=59.63 Aligned_cols=39 Identities=15% Similarity=0.174 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecC
Q 011178 56 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASR 99 (491)
Q Consensus 56 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 99 (491)
...++++|+|.| +.+|+|.|+|.. +...||.|.|+|.+.
T Consensus 57 ~~~~~~~~s~Tf---~~~G~Y~Y~C~p--H~~~GM~G~IvVgd~ 95 (124)
T d1bqka_ 57 KSKINENYKVTF---TAPGVYGVKCTP--HYGMGMVGVVQVGDA 95 (124)
T ss_dssp BCCTTCCEEEEC---CSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred cccCCccEEEec---CCCceEEEEecc--CcCCCCEEEEEECCC
Confidence 356788877777 469999999976 456799999999764
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.50 E-value=0.00016 Score=58.06 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=29.8
Q ss_pred CCCCeEEEEEEeCCCccceeEeCCccccccCCceeEEEEecCC
Q 011178 58 PPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRP 100 (491)
Q Consensus 58 ~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 100 (491)
.++++|++.| +.+|+|.|+|-. +...||.|.|+|.+++
T Consensus 59 ~~~~~~s~tF---~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~~~ 96 (120)
T d1paza_ 59 KINENYVLTV---TQPGAYLVKCTP--HYAMGMIALIAVGDSP 96 (120)
T ss_dssp CTTCCEEEEC---CSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred ccCceEEEEe---cCCCeEEEEEee--CCCCCCEEEEEECCCC
Confidence 4577777666 468999999976 4557999999998753
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.43 E-value=0.0004 Score=59.36 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=61.4
Q ss_pred eEEeecCCcEEEEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-c
Q 011178 363 SVMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN-V 440 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn-p 440 (491)
.+++++.|++++|+|+|.+.. .+-|+|+||+|.|++.. |. ...|...|++.|.+|+.+.+.+.++. +
T Consensus 54 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~via~D-G~----------~v~P~~~~~l~i~~gqR~dvlv~~~~~~ 122 (172)
T d1hfua2 54 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVD-GE----------LTEPHTVDRLQIFTGQRYSFVLDANQPV 122 (172)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEET-TE----------EEEEEEESBEEECTTCEEEEEEECCSCS
T ss_pred eEEEECCCCEEEEEEeeecCCceEEEEeCCCeEEEEEeC-CE----------EcccEEeceEeccCCeEEEEEEEcCCCC
Confidence 457899999999999999854 58999999999999985 42 23467889999999999999999976 5
Q ss_pred ceeeeeec
Q 011178 441 GMWNIRSE 448 (491)
Q Consensus 441 G~w~~HCH 448 (491)
|.|-+.+.
T Consensus 123 ~~Y~ira~ 130 (172)
T d1hfua2 123 DNYWIRAQ 130 (172)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEE
Confidence 76555443
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=97.43 E-value=0.00022 Score=58.06 Aligned_cols=43 Identities=26% Similarity=0.233 Sum_probs=37.0
Q ss_pred CCCCCCCCeEEEEEEeC--CCccceeEeCCccccccCCceeEEEEe
Q 011178 54 NCPIPPGKNFTYVLQVK--DQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 54 q~~i~PG~~~~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
...|.||++.+..|+++ .++|+|+|=|-.-.+. .||.|.|.|.
T Consensus 84 t~~l~pget~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 84 TKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp CCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred ccccCCCceEEEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 35589999999999997 4799999999876665 7999999985
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.33 E-value=0.00035 Score=56.59 Aligned_cols=79 Identities=11% Similarity=0.034 Sum_probs=54.9
Q ss_pred eeEEEEEEecCCCCCeeeecccC--C-------------------CCCCCCCCCCCCCCCCCCCCeEEEEEEeC--CCcc
Q 011178 18 LYTHLVVLNFIYMAPLITLNGVQ--Q-------------------RRNSWQDGVYGTNCPIPPGKNFTYVLQVK--DQIG 74 (491)
Q Consensus 18 d~v~i~~~N~l~~~~siH~HG~~--~-------------------~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~--~~~G 74 (491)
.+|+|+|+|....++++=.|-.- . .-.+.++.+......|.||++.+..|+++ .++|
T Consensus 27 e~v~l~~~N~g~~pH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~~i~f~~p~~~~~G 106 (128)
T d1jzga_ 27 KQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGE 106 (128)
T ss_dssp SEEEEEEECCSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEEEEEEEGGGCCTTC
T ss_pred CEEEEEEEeCCccchheeecCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceEEEEEEeeccCCCc
Confidence 46688899997766543333210 0 00122444433335699999999999997 5799
Q ss_pred ceeEeCCccccccCCceeEEEEe
Q 011178 75 SYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 75 t~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+|-|=|-.-.+. .||.|.|+|+
T Consensus 107 ~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 107 QYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp CEEEECCSTTGG-GTSEEEEEEC
T ss_pred eEEEEECCCCcc-cccEEEEEEC
Confidence 999999766666 7999999995
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.31 E-value=0.0012 Score=56.72 Aligned_cols=76 Identities=5% Similarity=-0.075 Sum_probs=61.4
Q ss_pred eEEeecCCcEEEEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEcc-Cc
Q 011178 363 SVMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLD-NV 440 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~ad-np 440 (491)
..++++.|++++|+|+|.+.. .+.|+|+||.|+|++.. |. ...|...|++.|.+|+.+.|-++++ .+
T Consensus 53 ~~~~v~~g~~~rlR~iN~~~~~~~~~~id~h~~~via~D-G~----------~v~P~~~~~~~i~~GqRydvlv~a~~~~ 121 (181)
T d2q9oa2 53 ANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAAD-MV----------PVNAMTVDSLFLAVGQRYDVVIDASRAP 121 (181)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEET-TE----------EEEEEEESCEEECTTCEEEEEEECCSCS
T ss_pred eEEEECCCCEEEEEEecccCCccEEEEECCceEEEEEeC-Ce----------EccceEeCEEEecCCcEEEEEEeCCCCC
Confidence 357889999999999999854 47899999999999996 42 1246678999999999999999996 45
Q ss_pred ceeeeeecc
Q 011178 441 GMWNIRSEN 449 (491)
Q Consensus 441 G~w~~HCHi 449 (491)
|.+-+.-..
T Consensus 122 ~~Y~ir~~~ 130 (181)
T d2q9oa2 122 DNYWFNVTF 130 (181)
T ss_dssp SEEEEEEEC
T ss_pred ccEEEEEec
Confidence 766565444
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.30 E-value=0.0004 Score=55.77 Aligned_cols=71 Identities=15% Similarity=0.243 Sum_probs=54.2
Q ss_pred EeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcceee
Q 011178 365 MAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWN 444 (491)
Q Consensus 365 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w~ 444 (491)
+.++.|+.|.|.|.|.+ ..|-|.+-... =.+.+.||....+.|.++.||.|.
T Consensus 49 l~vp~G~~V~~~lts~D-V~H~f~ip~~~---------------------------v~~d~~PG~~~~~~~~~~~~G~y~ 100 (122)
T d2cuaa_ 49 IEVPQGAEIVFKITSPD-VIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 100 (122)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEEEETTSS---------------------------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCEEEEEEEcCC-ccceeEecCCC---------------------------eeEEEecCceEEEEEEeccceeEE
Confidence 67899999999999986 44665442211 123456889999999999999999
Q ss_pred eeecc---hhhhhcceEEEEEEec
Q 011178 445 IRSEN---WARQYLGQQFYLRVYS 465 (491)
Q Consensus 445 ~HCHi---l~H~d~GMm~~~~V~~ 465 (491)
+.|+. ..| .+|...+.|.+
T Consensus 101 ~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 101 IICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EECCSCCSTTS--TTCEEEEEEEC
T ss_pred EEehhccCCCc--ccCeEEEEEEC
Confidence 99998 456 47998888863
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=97.25 E-value=0.00011 Score=57.47 Aligned_cols=84 Identities=12% Similarity=0.036 Sum_probs=58.5
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc-cCcce
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVGM 442 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a-dnpG~ 442 (491)
.++++.|++|.|+ |.+...|..++....+.. +. .........++..+.+++...+.|.+ +.+|.
T Consensus 20 ~l~v~~GdtV~f~--n~~~~~h~~~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~ 84 (105)
T d2q5ba1 20 NVTVHPGDTVKWV--NNKLPPHNILFDDKQVPG-----AS--------KELADKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEEE--ECSSCCEEEEECGGGSGG-----GC--------HHHHHHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceeEeecCcccc-----cc--------cccCCccccccccccCCceEEEEEEeccCCce
Confidence 4788999998875 555556665544332210 00 00011134578888899999999986 78999
Q ss_pred eeeeecchhhhhcceEEEEEEe
Q 011178 443 WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|.|+|.. |..+||...+.|.
T Consensus 85 y~y~C~~--H~~~GM~G~I~Ve 104 (105)
T d2q5ba1 85 YTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CCCCCCEEEEEEc
Confidence 9999985 9999999999884
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=97.24 E-value=0.0004 Score=56.27 Aligned_cols=85 Identities=12% Similarity=0.022 Sum_probs=57.3
Q ss_pred CeEEE---eeeEEEEEEecCCCCCeeeecccC--------------------CCCCCCCCC-CCCCCCCCCCCCeEEEEE
Q 011178 12 CSLIT---HLYTHLVVLNFIYMAPLITLNGVQ--------------------QRRNSWQDG-VYGTNCPIPPGKNFTYVL 67 (491)
Q Consensus 12 ~~l~v---~d~v~i~~~N~l~~~~siH~HG~~--------------------~~~~~~~DG-~~~~q~~i~PG~~~~Y~f 67 (491)
.+|.| +.+|+|+|+|...-++++=.|-+- ....+.+|. +......|.||++.+.+|
T Consensus 18 ~~i~V~~~ge~v~i~~~N~g~~pH~~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~~i~f 97 (128)
T d1nwpa_ 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CeEEEecCCcEEEEEEEeCCccccceeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCceEEEE
Confidence 34555 245788899997766555444321 001111222 222235589999999999
Q ss_pred EeC--CCccceeEeCCccccccCCceeEEEEe
Q 011178 68 QVK--DQIGSYFYFPSLAFHKAAGGYGGIKIA 97 (491)
Q Consensus 68 ~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 97 (491)
+++ ..+|+|-|=|-.-.++ .||.|.|+|+
T Consensus 98 ~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 98 DVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 997 5789999999876676 7999999995
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.23 E-value=0.00021 Score=63.41 Aligned_cols=81 Identities=12% Similarity=0.217 Sum_probs=63.8
Q ss_pred eeEEeecCCcEEEEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC-
Q 011178 362 TSVMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN- 439 (491)
Q Consensus 362 ~~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn- 439 (491)
..+++++.|++++++|+|.+.. .+.|||+||.|+||+.. |. ...|...|.+.|.+|+.+.|.++++.
T Consensus 74 ~~~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~VIa~D-G~----------~v~P~~v~~l~i~pGqRydvlv~~~~~ 142 (209)
T d1aoza2 74 PYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEAD-GN----------YVQPFYTSDIDIYSGESYSVLITTDQN 142 (209)
T ss_dssp CCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEET-TE----------EEEEEEESCEEECTTCEEEEEEECCSC
T ss_pred ceEEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEEEecC-CE----------EcccceeeeEEEccCcEEEEEEEecCC
Confidence 3458899999999999999865 59999999999999996 42 22467789999999999999999965
Q ss_pred cc-eeeeeecchhhh
Q 011178 440 VG-MWNIRSENWARQ 453 (491)
Q Consensus 440 pG-~w~~HCHil~H~ 453 (491)
+| .|.++-......
T Consensus 143 ~~~~y~i~~~~~~~~ 157 (209)
T d1aoza2 143 PSENYWVSVGTRARH 157 (209)
T ss_dssp TTCCEEEEEEEESSC
T ss_pred CCCceEEEEeccccC
Confidence 44 455554443333
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=97.22 E-value=0.0002 Score=55.26 Aligned_cols=80 Identities=13% Similarity=0.000 Sum_probs=50.2
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..++++.|++|.|+ |.+...|-+..... +.... ......-+...+.+|.... +.++.||.
T Consensus 19 ~~i~v~~GdtV~~~--n~~~~~H~~~~~~~---------~~~~~-------~~~~~~~~~~~~~~g~t~~--~tf~~~G~ 78 (98)
T d1pcsa_ 19 STVTIKAGEEVKWV--NNKLSPHNIVFDAD---------GVPAD-------TAAKLSHKGLLFAAGESFT--STFTEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCS---------SSCHH-------HHHHHCEEEEECSTTCEEE--EECCSCEE
T ss_pred CEEEECCCCEEEEe--ECCCCccceEEecc---------ccCCC-------ccccccccccccCCCcEEE--EeccCCce
Confidence 35789999999987 55545564433221 10000 0000122445566776544 45688999
Q ss_pred eeeeecchhhhhcceEEEEEEe
Q 011178 443 WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~ 464 (491)
+.|+|.. |...||...+.|.
T Consensus 79 y~Y~C~~--H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 79 YTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEecc--CCCCCCEEEEEEC
Confidence 9999975 9999999999873
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=97.20 E-value=0.00024 Score=57.71 Aligned_cols=44 Identities=23% Similarity=0.231 Sum_probs=37.5
Q ss_pred CCCCCCCCeEEEEEEeC--CCccceeEeCCccccccCCceeEEEEec
Q 011178 54 NCPIPPGKNFTYVLQVK--DQIGSYFYFPSLAFHKAAGGYGGIKIAS 98 (491)
Q Consensus 54 q~~i~PG~~~~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 98 (491)
...|.||++.+..|+++ ..+|+|-|=|-.-.+. .||.|.|+|++
T Consensus 84 t~~l~pGe~~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 84 TPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp CCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred ccccCccccceEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 35699999999999997 3599999999776665 79999999974
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.18 E-value=0.00046 Score=58.84 Aligned_cols=73 Identities=18% Similarity=0.260 Sum_probs=60.3
Q ss_pred eEEeecCCcEEEEEEEcCCCC-CCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEcc-Cc
Q 011178 363 SVMAADFRGFAEVVFENPEDT-LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLD-NV 440 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~ad-np 440 (491)
.++.++.|++++|+|+|.+.. .+-|+|+||.|.||+.. |. ...|..-|++.|.+|+.+.|.++++ .+
T Consensus 56 ~~~~v~~g~~~rlRlIN~~~~~~~~~~id~h~~~via~D-G~----------~v~P~~~d~l~i~~gqRydvlv~~~~~~ 124 (170)
T d1gyca2 56 AVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVD-GI----------NSQPLLVDSIQIFAAQRYSFVLNANQTV 124 (170)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEET-TE----------EEEEEEESBEEECTTCEEEEEEECCSCS
T ss_pred eEEEECCCCEEEEEEeecCCCceeeEEeCCCeEEEEEeC-Ce----------eccceEeeEEEecCCeEEEEEEeCCCCC
Confidence 457899999999999999854 59999999999999995 32 2246678999999999999999996 47
Q ss_pred ceeeee
Q 011178 441 GMWNIR 446 (491)
Q Consensus 441 G~w~~H 446 (491)
|.|-++
T Consensus 125 ~~y~ir 130 (170)
T d1gyca2 125 GNYWIR 130 (170)
T ss_dssp SEEEEE
T ss_pred CcEEEE
Confidence 775544
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=97.11 E-value=0.00024 Score=54.77 Aligned_cols=81 Identities=19% Similarity=0.078 Sum_probs=51.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..++++.|++|.|+ |.+...|.++.+.... .... .......+.....++. ++.+.++.+|.
T Consensus 18 ~~i~v~~GdtV~f~--n~~~~~h~~~~~~~~~---------~~~~------~~~~~~~~~~~~~~~~--t~~~tf~~~G~ 78 (98)
T d2plta_ 18 KTLTIKSGETVNFV--NNAGFPHNIVFDEDAI---------PSGV------NADAISRDDYLNAPGE--TYSVKLTAAGE 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECGGGS---------CTTC------CHHHHCEEEEECSTTC--EEEEECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCceeEEEecCCc---------cccc------cCCcccccccccCCCc--eEEEEecCCce
Confidence 34789999999886 5555566655543211 0000 0001123455554554 45667789999
Q ss_pred eeeeecchhhhhcceEEEEEEe
Q 011178 443 WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|-|+|.. |..+||-..+.|+
T Consensus 79 y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d2plta_ 79 YGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECGG--GGGGTCEEEEEEC
T ss_pred EEEEeCc--CCCCCCEEEEEEC
Confidence 9999975 9999999999873
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=96.96 E-value=0.00069 Score=54.30 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=46.0
Q ss_pred eeeEEEEEEecCCCCCeeeecccCCCCCCCCCCCCCCCCCCCCCCeEEEEEEeCCCccceeEeCCcc-ccccCCceeEEE
Q 011178 17 HLYTHLVVLNFIYMAPLITLNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA-FHKAAGGYGGIK 95 (491)
Q Consensus 17 ~d~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~Gl~G~li 95 (491)
|++|+++++|.- .+ ||+.++. . |+ +.-+.||++-+..|++ +++|+|+|.|+.- .-...+|.|-|+
T Consensus 54 G~~V~~~lts~D----V~--H~f~ip~---~-~v---~~d~~PG~~~~~~~~~-~~~G~y~~~C~~~CG~~H~~M~g~i~ 119 (122)
T d2cuaa_ 54 GAEIVFKITSPD----VI--HGFHVEG---T-NI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQNMFGTIV 119 (122)
T ss_dssp TSEEEEEEEBSS----SC--EEEEETT---S-SC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTSTTCEEEEE
T ss_pred CCEEEEEEEcCC----cc--ceeEecC---C-Ce---eEEEecCceEEEEEEe-ccceeEEEEehhccCCCcccCeEEEE
Confidence 466777788762 22 5665322 1 11 2236799999999998 6999999999841 111257999999
Q ss_pred Eec
Q 011178 96 IAS 98 (491)
Q Consensus 96 V~~ 98 (491)
|++
T Consensus 120 V~e 122 (122)
T d2cuaa_ 120 VKE 122 (122)
T ss_dssp EEC
T ss_pred EEC
Confidence 975
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.92 E-value=0.0025 Score=53.42 Aligned_cols=93 Identities=13% Similarity=0.010 Sum_probs=70.5
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCce--eeEEeCCCCEEEEEEEccCc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISR--CTVQVYPKSWTAVYVPLDNV 440 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~r--DTv~v~p~~~~~irf~adnp 440 (491)
+.++++.|++|.+ +.+.....=.||+-|-+|--|=.. |.+ .+++.+ -|+.|++++-..+.|.+..|
T Consensus 70 ~aL~AkvGEtV~~-~~~gpN~~SsfHvIGg~~D~V~~~-G~~----------~n~p~~~~qT~~v~~G~a~~~~~tf~~P 137 (178)
T d1mzya2 70 GALKAKVGDNVLF-VHSQPNRDSRPHLIGGHGDLVWET-GKF----------HNAPERDLETWFIRGGTAGAALYKFLQP 137 (178)
T ss_dssp GCEEEETTCEEEE-EEEESSSCBCEEEETCCEEEEETT-CCT----------TSCCEEEESBCCBCTTEEEEEEEECCSC
T ss_pred CCcccccCCeEEE-ecccCCCCCCcccccCccceEccC-Ccc----------CCCCCCCceEEEecCCceeEEEEEeCCC
Confidence 3467889999843 443334557899999999654432 322 344444 58899999999999999999
Q ss_pred ceeeeeecchhh-hhcceEEEEEEecCC
Q 011178 441 GMWNIRSENWAR-QYLGQQFYLRVYSSA 467 (491)
Q Consensus 441 G~w~~HCHil~H-~d~GMm~~~~V~~~~ 467 (491)
|.+.|--|.|.. .+.|.++.+.|..+.
T Consensus 138 G~Y~~VdH~l~~A~~kGA~g~l~V~G~~ 165 (178)
T d1mzya2 138 GVYAYVNHNLIEAVHKGATAHVLVEGEW 165 (178)
T ss_dssp EEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred eEEEEEccHHHHHHhCCCeEEEEeCCCC
Confidence 999999999855 699999999997443
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=96.90 E-value=0.0024 Score=48.19 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=50.3
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..+.++.|++|.|+ |.+...|-....+. . +..-+...+.+|... .+.++.||.
T Consensus 19 ~~i~I~~GdtV~f~--n~d~~~h~~~~~~~---------~--------------~~~~~~~~~~~g~~~--~~tF~~~G~ 71 (91)
T d1bxua_ 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGETF--EATFSEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCEE--EEECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCcCCceEEeccc---------c--------------cccccccccCCCCCE--EEEeccCce
Confidence 45788999999884 66655453322111 1 112356677777764 456689999
Q ss_pred eeeeecchhhhhcceEEEEEEe
Q 011178 443 WNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V~ 464 (491)
+.|+|-. |...||-..+.|.
T Consensus 72 y~Y~C~~--H~~~gM~G~I~Ve 91 (91)
T d1bxua_ 72 YTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CCCCCCEEEEEEC
Confidence 9999976 9999999999873
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=96.68 E-value=0.00095 Score=53.62 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=28.3
Q ss_pred EEEEccCcceeeeeecchhhhhcceEEEEEEecC
Q 011178 433 VYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 433 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 466 (491)
+.+.++.||.|.|+|.+ |..+||...+.|+++
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~ 95 (123)
T d1pmya_ 64 AVVKFDKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp EEEECCSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred cccccCCCceEEEEecc--CCCCCCEEEEEECCC
Confidence 45668999999999977 999999999999765
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=96.34 E-value=0.0081 Score=48.29 Aligned_cols=99 Identities=10% Similarity=-0.053 Sum_probs=67.4
Q ss_pred EEeecCC-cEEEEEEEcCCCCCCceeccCCCeEEEeeccCC-C-----CCC-CCCCccc-CCCCceeeEEeCCCCEEEEE
Q 011178 364 VMAADFR-GFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGE-W-----TPA-SRLTYNL-RDTISRCTVQVYPKSWTAVY 434 (491)
Q Consensus 364 ~~~~~~g-~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~-~-----~~~-~~~~~~~-~~p~~rDTv~v~p~~~~~ir 434 (491)
.++++.| +.|.++|.|.+..+|-+ =+|.+-+...+... . ... ....+.. ......-|..|.||+...|.
T Consensus 19 ~i~V~aG~e~v~i~~~N~g~lph~~--~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~~i~ 96 (129)
T d1cuoa_ 19 SISVPASCAEFTVNFEHKGHMPKTG--MGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHH--HCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred EEEEeCCCEEEEEEEEeCCcCCcee--EEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCccccceEE
Confidence 4788999 89999999999888764 34455444432100 0 000 0000101 11234458889999999999
Q ss_pred EEc---cCcceeeeeecchhhhhcceEEEEEEec
Q 011178 435 VPL---DNVGMWNIRSENWARQYLGQQFYLRVYS 465 (491)
Q Consensus 435 f~a---dnpG~w~~HCHil~H~d~GMm~~~~V~~ 465 (491)
|++ ..||.+.|=|=+--|+ .||-..+.|.+
T Consensus 97 f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 97 FKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred EEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 987 3599999999998898 89999999864
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=96.26 E-value=0.0053 Score=46.97 Aligned_cols=82 Identities=15% Similarity=0.028 Sum_probs=49.4
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..++++.|++|.|+ |.+..+|.+......+- .+ .... . .....+.....+|....+ .++.||.
T Consensus 17 ~~iti~~GdtV~f~--n~~~~~Hnv~~~~~~~~-----~~-~~~~-~------~~~~~~~~~~~~g~t~~~--tF~~~G~ 79 (99)
T d1plca_ 17 SEFSISPGEKIVFK--NNAGFPHNIVFDEDSIP-----SG-VDAS-K------ISMSEEDLLNAKGETFEV--ALSNKGE 79 (99)
T ss_dssp SEEEECTTCEEEEE--ECSSCCBCCEECTTSSC-----TT-CCHH-H------HCCCTTCCBCSTTCEEEE--ECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCccEEEccCcCC-----Cc-cccc-c------CcccccccccCCCceEEE--ecCCCce
Confidence 35789999999984 66666787643221110 00 0000 0 001112223346665544 5578999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
+-|+|- .|...||-..+.|
T Consensus 80 y~Y~C~--pH~~~GM~G~I~V 98 (99)
T d1plca_ 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEeC--CCcCCCcEEEEEE
Confidence 999994 5999999999987
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.13 E-value=0.016 Score=46.45 Aligned_cols=98 Identities=6% Similarity=-0.113 Sum_probs=67.3
Q ss_pred EEee-cCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCC-------CCCCCCCCcc-cCCCCceeeEEeCCCCEEEEE
Q 011178 364 VMAA-DFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGE-------WTPASRLTYN-LRDTISRCTVQVYPKSWTAVY 434 (491)
Q Consensus 364 ~~~~-~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~-------~~~~~~~~~~-~~~p~~rDTv~v~p~~~~~ir 434 (491)
.+++ +.|+.|+++|.|.+.++|-+=+| ..-++..+.-. -.......+. -..-...-|..|.||+...|.
T Consensus 19 ~i~V~k~Ge~v~l~~~N~g~~pH~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~~i~ 96 (128)
T d1jzga_ 19 AITVDKSCKQFTVNLSHPGNLPKNVMGH--NWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (128)
T ss_dssp EEEECTTCSEEEEEEECCSSSCHHHHCB--CCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred eEEEecCCCEEEEEEEeCCccchheeec--CcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceEEEE
Confidence 4778 58999999999999998886554 33344322100 0000000010 011234568889999999999
Q ss_pred EEc---cCcceeeeeecchhhhhcceEEEEEEe
Q 011178 435 VPL---DNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 435 f~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|++ +.||.+.|=|=+--|+ .||-..+.|.
T Consensus 97 f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 97 FDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 987 4799999999999999 9999999873
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.09 E-value=0.0027 Score=44.69 Aligned_cols=43 Identities=12% Similarity=-0.018 Sum_probs=35.3
Q ss_pred eCCCCEEEEEEEccCcc----------eeeeeecchh--hhhcceEEEEEEecCC
Q 011178 425 VYPKSWTAVYVPLDNVG----------MWNIRSENWA--RQYLGQQFYLRVYSSA 467 (491)
Q Consensus 425 v~p~~~~~irf~adnpG----------~w~~HCHil~--H~d~GMm~~~~V~~~~ 467 (491)
|.||++.+-+|.+...+ .|.||||+.. +...||...+.|-.+.
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g 57 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 57 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCC
Confidence 67899999999985544 8999999954 6778999999986553
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=96.02 E-value=0.016 Score=46.45 Aligned_cols=98 Identities=7% Similarity=-0.122 Sum_probs=69.1
Q ss_pred EEeec-CCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCC------CCCCCCCCccc--CCCCceeeEEeCCCCEEEEE
Q 011178 364 VMAAD-FRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGE------WTPASRLTYNL--RDTISRCTVQVYPKSWTAVY 434 (491)
Q Consensus 364 ~~~~~-~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~------~~~~~~~~~~~--~~p~~rDTv~v~p~~~~~ir 434 (491)
.+.++ .|+.|.++|.|.+.++|-+=+| .+-++..+... -.......+-. ..+...-|..+.||+...|-
T Consensus 19 ~i~V~~~ge~v~i~~~N~g~~pH~~~~h--n~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~~i~ 96 (128)
T d1nwpa_ 19 DIAIDKSCKTFTVELTHSGSLPKNVMGH--NLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCB--CCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred eEEEecCCcEEEEEEEeCCccccceeee--cccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCceEEE
Confidence 36774 6999999999999999987544 55555543100 00000011111 22355678899999999999
Q ss_pred EEc---cCcceeeeeecchhhhhcceEEEEEEe
Q 011178 435 VPL---DNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 435 f~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|++ ..||.+.|=|=+--|+ .||-..+.|.
T Consensus 97 f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 97 FDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 988 4789999999999999 8999999873
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=96.01 E-value=0.0066 Score=48.17 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=27.8
Q ss_pred EEEEccCcceeeeeecchhhhhcceEEEEEEecC
Q 011178 433 VYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 433 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 466 (491)
.-+.++.||.|-|+|-. |..+||...+.|.++
T Consensus 64 ~s~tF~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~~ 95 (120)
T d1paza_ 64 YVLTVTQPGAYLVKCTP--HYAMGMIALIAVGDS 95 (120)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred EEEEecCCCeEEEEEee--CCCCCCEEEEEECCC
Confidence 34667899999999976 999999999999865
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=95.90 E-value=0.0021 Score=49.56 Aligned_cols=31 Identities=10% Similarity=0.071 Sum_probs=26.4
Q ss_pred EEEEEccCcceeeeeecchhhhhcceEEEEEEe
Q 011178 432 AVYVPLDNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 432 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.+.+.++.||.|-|+|.. |..+||-..+.|+
T Consensus 72 ~~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 72 SFKAKVSTPGTYTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEEECCCSCEEEEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeeCCCceEEEEecC--CcccCCeEEEEEC
Confidence 455667889999999985 9999999999884
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=95.89 E-value=0.011 Score=45.65 Aligned_cols=72 Identities=7% Similarity=-0.083 Sum_probs=46.0
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|+.|.| .|.+...|.++.... .... ...+.-.+.+++.. ++.++.||.+
T Consensus 34 ~i~V~~GdtV~f--~N~d~~~H~v~~~~~----------~~~~-----------~~~~~~~~~~g~~~--~~tf~~pG~y 88 (105)
T d2ov0a1 34 ELHVKVGDTVTW--INREAMPHNVHFVAG----------VLGE-----------AALKGPMMKKEQAY--SLTFTEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTT----------TSSS-----------SCEECCCBCTTEEE--EEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEEecc----------cCCc-----------ccccccccCCCceE--EEEecCCeEE
Confidence 367899999988 466667787553221 1100 01123333455544 4556889999
Q ss_pred eeeecchhhhhcceEEEEEEe
Q 011178 444 NIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~ 464 (491)
.|+|-+ | .||...+.|.
T Consensus 89 ~y~C~~--H--~~M~G~I~Ve 105 (105)
T d2ov0a1 89 DYHCTP--H--PFMRGKVVVE 105 (105)
T ss_dssp EEECSS--C--TTCEEEEEEC
T ss_pred EEEecC--C--CCCEEEEEEC
Confidence 999987 5 6899998873
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=95.78 E-value=0.022 Score=45.68 Aligned_cols=98 Identities=6% Similarity=-0.151 Sum_probs=65.7
Q ss_pred EEee-cCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCC------CC-CCCCCCcccCC-CCceeeEEeCCCCEEEEE
Q 011178 364 VMAA-DFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGE------WT-PASRLTYNLRD-TISRCTVQVYPKSWTAVY 434 (491)
Q Consensus 364 ~~~~-~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~------~~-~~~~~~~~~~~-p~~rDTv~v~p~~~~~ir 434 (491)
.+++ +.|+.|+++|.|.+..+|-+=. |.|-+...+.-. .. ......+.... ...--|..|.||+...|-
T Consensus 19 ~i~V~k~G~~V~l~~~N~g~l~h~~m~--hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~~i~ 96 (129)
T d2ccwa1 19 EIVVDKSCKQFTMHLKHVGKMAKVAMG--HNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHC--BCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred eEEEecCCCEEEEEEEcCCcCchheee--ccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCceEEEE
Confidence 3677 6899999999999987765433 455555432100 00 00000000011 123347788999999999
Q ss_pred EEc---cCcceeeeeecchhhhhcceEEEEEEe
Q 011178 435 VPL---DNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 435 f~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
|++ ..||.+.|=|=+--|+ .||-..++|.
T Consensus 97 f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 97 FDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 998 4799999999999997 8999999884
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=95.73 E-value=0.0041 Score=47.34 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=27.1
Q ss_pred EEEEEEccCcceeeeeecchhhhhcceEEEEEEe
Q 011178 431 TAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 431 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
..+.+.++.||.+-|+|-. |..+||-..+.|+
T Consensus 66 ~~~~~tf~~~G~y~Y~C~~--H~~~GM~G~I~Ve 97 (97)
T d2jxma1 66 SFYSVTLGTPGTYSFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp CCEEEECCSCSEEEEECSS--TTTTTCEEEEEEC
T ss_pred eEEEEecCCCeEEEEEEcc--CCCCCCEEEEEEC
Confidence 3566778899999999965 9999999999873
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=95.72 E-value=0.012 Score=49.35 Aligned_cols=71 Identities=15% Similarity=0.194 Sum_probs=53.2
Q ss_pred CcEEEEEEEcCCCCC-Ccee-ccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccC--cceeee
Q 011178 370 RGFAEVVFENPEDTL-QSWH-IDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDN--VGMWNI 445 (491)
Q Consensus 370 g~~v~~~i~N~~~~~-HP~H-lHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adn--pG~w~~ 445 (491)
|++++|+|.|.+... .-++ .+||.|+|++..++. +..|...|++.+.||+.+.|-+.+.. .+.|+-
T Consensus 58 ~~~~RlR~iNa~~~~~~~~~~~~g~~~~via~DG~~----------~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~~~~ 127 (165)
T d1kv7a2 58 RGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL----------LPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVT 127 (165)
T ss_dssp EEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE----------EEEEEEESCEEECTTCEEEEEEEECTTCCEEEEE
T ss_pred CcEEEEEEEEcccCceeeEEecCCCeEEEEEeCCcc----------ccCceEeCeEEECCCCEEEEEEECCCCCcEEEEE
Confidence 668899999987544 3455 489999999996432 22466789999999999999988754 356776
Q ss_pred eecch
Q 011178 446 RSENW 450 (491)
Q Consensus 446 HCHil 450 (491)
.++-.
T Consensus 128 l~~~~ 132 (165)
T d1kv7a2 128 LPVSQ 132 (165)
T ss_dssp CCCSS
T ss_pred EecCC
Confidence 66654
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=95.62 E-value=0.0073 Score=46.53 Aligned_cols=85 Identities=15% Similarity=0.099 Sum_probs=54.6
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEc-cCcc
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPL-DNVG 441 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~a-dnpG 441 (491)
..++++.|++|.|+ |.+...|-..+. .. + ..... .........+.....+++...+.|.+ +.||
T Consensus 19 ~~i~v~~GdtV~f~--n~~~~~h~~~~~-------~~--~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G 83 (105)
T d2cj3a1 19 AKLTIKPGDTVEFL--NNKVPPHNVVFD-------AA--L-NPAKS---ADLAKSLSHKQLLMSPGQSTSTTFPADAPAG 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEEC-------SS--S-STTCC---HHHHHHHCEEEEECSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCceeeEec-------cC--C-CCccc---cccCCcccccccccCCCcceEEEEEeccCCc
Confidence 34789999999985 444333332221 11 1 00000 00001123577778888889999976 6799
Q ss_pred eeeeeecchhhhhcceEEEEEEe
Q 011178 442 MWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 442 ~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
.+.|+|-. |..+||-..+.|.
T Consensus 84 ~y~y~C~~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 84 EYTFYCEP--HRGAGMVGKITVA 104 (105)
T ss_dssp EEEEECTT--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--CcCCCcEEEEEEe
Confidence 99999965 9999999999884
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=95.41 E-value=0.022 Score=48.17 Aligned_cols=63 Identities=17% Similarity=0.291 Sum_probs=49.3
Q ss_pred CcEEEEEEEcCCCC-CCceec-cCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEcc-Ccce
Q 011178 370 RGFAEVVFENPEDT-LQSWHI-DGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLD-NVGM 442 (491)
Q Consensus 370 g~~v~~~i~N~~~~-~HP~Hl-HG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~ad-npG~ 442 (491)
++.++|+|.|.+.. .+-+++ +|+.|+||+..++. +..|...|++.+.||+.+.|-+.+. .+|.
T Consensus 65 ~~~~RlRliNa~~~~~~~l~~~~g~~~~vIa~DG~~----------l~~P~~~~~l~l~pgeR~dvlv~~~~~~g~ 130 (174)
T d1gska2 65 PRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGL----------LPRSVKLNSFSLAPAERYDIIIDFTAYEGE 130 (174)
T ss_dssp SSEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECGGGTTC
T ss_pred CceEEEEEEecccCceeeEeecCCCcEEEEEECCCc----------ccCceEeCEEEEcCCcEEEEEEECCCCCCc
Confidence 55689999999865 478888 79999999996432 2246678999999999999999874 3553
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=95.38 E-value=0.031 Score=42.19 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=28.8
Q ss_pred EeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEe
Q 011178 424 QVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 424 ~v~p~~~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 464 (491)
...++.. +.+.++.||.+-|+|-. |..+||...+.|+
T Consensus 62 ~~~~~~~--~~~~f~~~G~y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d1iuza_ 62 LNSKGET--VVRKLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp ECSTTCE--EEEECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred ccCCCcE--EEEecCCCceEEEEeCC--CccCCCeEEEEEC
Confidence 3344554 45667899999999965 9999999999873
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=95.24 E-value=0.01 Score=47.23 Aligned_cols=32 Identities=9% Similarity=0.196 Sum_probs=27.4
Q ss_pred EEEEccCcceeeeeecchhhhhcceEEEEEEecC
Q 011178 433 VYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 433 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 466 (491)
+.+.++.+|.|-|+|=+ |..+||...+.|+++
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~~ 95 (123)
T d1adwa_ 64 YTLTVTEPGLYGVKCTP--HFGMGMVGLVQVGDA 95 (123)
T ss_dssp EEEEECSCEEEEEECGG--GGGGTCEEEEEESSS
T ss_pred eEEeccCCCeEEEEEcc--CCCCCCEEEEEECCC
Confidence 35556889999999966 999999999999764
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=95.24 E-value=0.019 Score=45.72 Aligned_cols=32 Identities=13% Similarity=0.185 Sum_probs=27.5
Q ss_pred EEEEccCcceeeeeecchhhhhcceEEEEEEecC
Q 011178 433 VYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSS 466 (491)
Q Consensus 433 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 466 (491)
+.+.++.||.|-|+|-. |..+||...+.|.++
T Consensus 64 ~s~Tf~~~G~Y~Y~C~p--H~~~GM~G~IvVgd~ 95 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCTP--HYGMGMVGVVQVGDA 95 (124)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred EEEecCCCceEEEEecc--CcCCCCEEEEEECCC
Confidence 45677899999999975 999999999999753
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=94.39 E-value=0.045 Score=41.31 Aligned_cols=82 Identities=11% Similarity=-0.042 Sum_probs=46.7
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
..++++.|++|.|+ |.+...|-+...... .-..... . ......+.....++.. +.+.++.||.
T Consensus 17 ~~i~v~~GdtV~f~--n~~~~~h~~~~~~~~---------~~~~~~~--~--~~~~~~~~~~~~~~~~--~~~tf~~~G~ 79 (99)
T d1bypa_ 17 SDLSIASGEKITFK--NNAGFPHNDLFDKKE---------VPAGVDV--T--KISMPEEDLLNAPGEE--YSVTLTEKGT 79 (99)
T ss_dssp SEEEECTTEEEEEE--ECSSCCBCCEECTTS---------SCTTCCH--H--HHSCCTTCCBCSTTCE--EEEEECSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCceeEEEecCC---------CCCcccc--c--cCcccccccccCCCce--EEEEecCCce
Confidence 35789999998885 555455543322110 0000000 0 0001112233334444 4556689999
Q ss_pred eeeeecchhhhhcceEEEEEE
Q 011178 443 WNIRSENWARQYLGQQFYLRV 463 (491)
Q Consensus 443 w~~HCHil~H~d~GMm~~~~V 463 (491)
+-|+|-. |...||...+.|
T Consensus 80 y~y~C~~--H~~~GM~G~I~V 98 (99)
T d1bypa_ 80 YKFYCAP--HAGAGMVGKVTV 98 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEE
T ss_pred EEEEECc--CCCCCCEEEEEE
Confidence 9999964 999999999987
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=92.42 E-value=0.23 Score=37.71 Aligned_cols=72 Identities=8% Similarity=-0.119 Sum_probs=44.1
Q ss_pred EEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCccee
Q 011178 364 VMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 443 (491)
Q Consensus 364 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~w 443 (491)
.+.++.|++|.| .|.+...|.+-... +.. .. ..-|.-.+.++. ...+.++.||.+
T Consensus 35 ~i~V~~GdtV~f--~N~d~~~H~v~~~~----------~~~-~~----------~~f~s~~~~~~~--~~~~tf~~~G~y 89 (106)
T d1id2a_ 35 EVTIKAGETVYW--VNGEVMPHNVAFKK----------GIV-GE----------DAFRGEMMTKDQ--AYAITFNEAGSY 89 (106)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECT----------TTS-SS----------SCEECCCBCTTE--EEEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEecc----------ccC-Cc----------ccccccccCCCc--eEEEecCCCeEE
Confidence 367889999887 47666666543211 100 00 011222233444 345667899999
Q ss_pred eeeecchhhhhcceEEEEEEe
Q 011178 444 NIRSENWARQYLGQQFYLRVY 464 (491)
Q Consensus 444 ~~HCHil~H~d~GMm~~~~V~ 464 (491)
-|+|=+ | .||...+.|.
T Consensus 90 ~y~C~~--H--~~M~G~I~Ve 106 (106)
T d1id2a_ 90 DYFCTP--H--PFMRGKVIVE 106 (106)
T ss_dssp EEECSS--C--TTCEEEEEEC
T ss_pred EEEccC--C--CCCEEEEEEC
Confidence 999987 6 5999999873
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=87.58 E-value=0.7 Score=37.68 Aligned_cols=75 Identities=9% Similarity=0.056 Sum_probs=52.9
Q ss_pred eEEeecCCcEEEEEEEcCCCCCCceeccCCCeEEEeeccCCCCCCCCCCcccCCCCceeeEEeCCCCEEEEEEEccCcce
Q 011178 363 SVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGM 442 (491)
Q Consensus 363 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v~p~~~~~irf~adnpG~ 442 (491)
+.+.++.|+.|++.|.+.+ ..| .|+|-+-+ =-..+-||....+.|.++.||.
T Consensus 27 n~l~lP~g~pV~~~ltS~D-ViH-------sF~vP~l~--------------------~k~daiPG~~~~~~~~~~~~G~ 78 (158)
T d1cyxa_ 27 NEIAFPANTPVYFKVTSNS-VMH-------SFFIPRLG--------------------SQIYAMAGMQTRLHLIANEPGT 78 (158)
T ss_dssp SEEEEETTSCEEEEEEESS-SCE-------EEEEGGGT--------------------EEEEECTTCCEEEEECCSSSEE
T ss_pred eeEEeeCCCeEEEEEEcCC-cch-------hhhhhhcc--------------------eeeccCCCceeeeeeeecCCCc
Confidence 3467899999999999886 334 45542211 1133557889999999999999
Q ss_pred eeeeecchhhh-hcceEEEEEEec
Q 011178 443 WNIRSENWARQ-YLGQQFYLRVYS 465 (491)
Q Consensus 443 w~~HCHil~H~-d~GMm~~~~V~~ 465 (491)
|...|..+-.. +..|...+.|++
T Consensus 79 y~g~Cae~CG~gH~~M~~~v~vv~ 102 (158)
T d1cyxa_ 79 YDGICAEICGPGHSGMKFKAIATP 102 (158)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEES
T ss_pred EEEEchhhcCcccccCceEEEEEC
Confidence 99999986655 455655565553
|