Citrus Sinensis ID: 011205

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-
MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDFTCGSIKSNVLQL
ccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccEEEcccccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccEEEEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccEEEEEEHHHHcccccccccccccccccccccccccccEEEEEEEEEccccccccEEEccccccEEEEEcccccccccccEEEEEEEEEccccccccccccccccEEEEEEEEcccccccccccccccEEEEEEEccEEEccEEEEcccccccccccccccccHHcccccHHHHHcccccccccccccccEEEEEEEEEccccccccEEEEEccccEEEEEEccEEEEEcccccccEEEEEcccccccccccEEEEEEEcccccccEEEEEccccccccccccccccc
ccEEEcccccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHccccccccEEEEEEccccccHHHHHHHHHHHccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHccccccccccccccHHHHccccEEEEEEEEccccccccEEEEcccccEEEEEEccEEEEEEEcccccEEEEEcccEEEEEcccccccccEEEEEEEccccEcccccccccccccccEEEcccEccccEEEEcccccccHHHHHccHHHccHcccccHcccccccccccccccccEEEEEEEEEccccccccEEEEccccccEEEEEEcccccccccccccEEEEEEcccHccccccEEEEEEEcccccccEEEEEccccccccccccccccc
mvqienefgsygddkeYLHHLVTLARAHLgkdiilyttdggtretllkgtirgdAVFAAvdfstgaepwpifklqkqfnapgkspplssefyTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAhggtnfgfyngantgntesdyqpdltsydydapikesgdvdnpkFKAIRRVVEkfspaslpsvlpdnekagfgpiqlQKTALLFDLldvldpadvvesenplsmesVGQMFGFLLYVSefggkdygsslliskvHDRAqvfiscptednsgrptyvgTIERWSnralslpnfrcgsniSLFVLVENmgrvnygpymfdekgiLSSVYlggkvlrgwkmipvpfhnlnevpkispILEVAYSGLIKASARKKLEhnagnitkepafyvgrfsidkvNQVKDTYLSFSGWGKGIAFVnefnlgrfwpsfgpqcdlyvpapilrhgeNLVVIFElespnselvihsvnqpdftcgsiksnvlql
mvqienefgsygddKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPikesgdvdnpKFKAIRRVVEKfspaslpsvlpdNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFiscptednsgrptYVGTIERWSNRALSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKlehnagnitkepafyvgrfSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSvnqpdftcgsiksnvlql
MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTAllfdlldvldpadvvESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDFTCGSIKSNVLQL
**********YGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFN*********SEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANT********************************AIRRVVE****************AGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDFTCG*********
MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDFTCGSI*******
********GSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDFTCGSIKSNVLQL
MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDFTC**********
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MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDFTCGSIKSNVLQL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query491 2.2.26 [Sep-21-2011]
Q93Z24697 Beta-galactosidase 17 OS= no no 0.987 0.695 0.646 0.0
Q0DGD7673 Beta-galactosidase 8 OS=O yes no 0.977 0.713 0.601 1e-170
Q54GE1671 Beta-galactosidase 1 OS=D yes no 0.916 0.670 0.349 1e-75
O19015669 Beta-galactosidase OS=Fel N/A no 0.883 0.648 0.383 7e-73
Q9TRY9668 Beta-galactosidase OS=Can yes no 0.881 0.648 0.381 2e-72
Q58D55653 Beta-galactosidase OS=Bos yes no 0.871 0.655 0.371 3e-72
Q60HF6682 Beta-galactosidase OS=Mac N/A no 0.881 0.634 0.381 4e-72
P16278677 Beta-galactosidase OS=Hom yes no 0.881 0.639 0.375 1e-70
Q5R7P4677 Beta-galactosidase OS=Pon yes no 0.881 0.639 0.377 2e-70
P23780647 Beta-galactosidase OS=Mus yes no 0.885 0.672 0.373 8e-70
>sp|Q93Z24|BGA17_ARATH Beta-galactosidase 17 OS=Arabidopsis thaliana GN=BGAL17 PE=2 SV=1 Back     alignment and function desciption
 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/492 (64%), Positives = 400/492 (81%), Gaps = 7/492 (1%)

Query: 1   MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAV 60
           MVQIENE+GSYG+DK YL  LV++AR HLG DII+YTTDGGT+ETL KGT+    V++AV
Sbjct: 212 MVQIENEYGSYGNDKAYLRKLVSMARGHLGDDIIVYTTDGGTKETLDKGTVPVADVYSAV 271

Query: 61  DFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILS 120
           DFSTG +PWPIFKLQK+FNAPG+SPPLSSEFYTGWLTHWGEKI KTDA+FTA+ LEKILS
Sbjct: 272 DFSTGDDPWPIFKLQKKFNAPGRSPPLSSEFYTGWLTHWGEKITKTDAEFTAASLEKILS 331

Query: 121 QNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRR 180
           +NGSAVLYM HGGTNFGFYNGANTG+ ESDY+PDLTSYDYDAPIKESGD+DNPKF+A++R
Sbjct: 332 RNGSAVLYMVHGGTNFGFYNGANTGSEESDYKPDLTSYDYDAPIKESGDIDNPKFQALQR 391

Query: 181 VVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQM 240
           V++K++ +  P    + ++  +G I++Q T  LFDL+ + DPADV+ S NP+SMESVGQM
Sbjct: 392 VIKKYNASPHPISPSNKQRKAYGSIKMQMTTSLFDLVRMTDPADVITSANPISMESVGQM 451

Query: 241 FGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTED-NSGRPTYVGTIERWSNRALSL 299
           FGFLLY S +  K  G++L I KVHDRAQVF+SC ++D + G   Y+GT ERW+N+ +SL
Sbjct: 452 FGFLLYESSYIAKKSGNTLRIPKVHDRAQVFVSCLSQDVDVGVLRYIGTTERWNNQPISL 511

Query: 300 PNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEV 359
           P   C +N SLF+LVENMGRVNYGPY+FD+KGILSSVYL G++L GWKMIP+PFHNLN+ 
Sbjct: 512 PTIECTTNTSLFILVENMGRVNYGPYIFDDKGILSSVYLDGQILHGWKMIPIPFHNLNQE 571

Query: 360 PKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWG 419
           P ++   E+ ++     S + +L ++ G   KEPA + G FSI+   ++KDTYLSF+GWG
Sbjct: 572 PNLT--FEMQHTK--NRSKKFELTNDVGR--KEPALFAGEFSINSEEEIKDTYLSFNGWG 625

Query: 420 KGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDF 479
           KG+AFVNEFN+GR+WPS GPQC+LYVPAP+L+ G+N +V+FELESP+ EL + +V+  DF
Sbjct: 626 KGVAFVNEFNIGRYWPSVGPQCNLYVPAPLLKRGKNTLVVFELESPHLELSLEAVDHQDF 685

Query: 480 TCGSIKSNVLQL 491
           TCGS  S V QL
Sbjct: 686 TCGSNVSKVNQL 697

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 3
>sp|Q0DGD7|BGAL8_ORYSJ Beta-galactosidase 8 OS=Oryza sativa subsp. japonica GN=Os05g0539400 PE=2 SV=1 Back     alignment and function description
>sp|Q54GE1|BGAL1_DICDI Beta-galactosidase 1 OS=Dictyostelium discoideum GN=glb1 PE=3 SV=1 Back     alignment and function description
>sp|O19015|BGAL_FELCA Beta-galactosidase OS=Felis catus GN=GLB1 PE=2 SV=1 Back     alignment and function description
>sp|Q9TRY9|BGAL_CANFA Beta-galactosidase OS=Canis familiaris GN=GLB1 PE=2 SV=3 Back     alignment and function description
>sp|Q58D55|BGAL_BOVIN Beta-galactosidase OS=Bos taurus GN=GLB1 PE=2 SV=1 Back     alignment and function description
>sp|Q60HF6|BGAL_MACFA Beta-galactosidase OS=Macaca fascicularis GN=GLB1 PE=2 SV=1 Back     alignment and function description
>sp|P16278|BGAL_HUMAN Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV=2 Back     alignment and function description
>sp|Q5R7P4|BGAL_PONAB Beta-galactosidase OS=Pongo abelii GN=GLB1 PE=2 SV=1 Back     alignment and function description
>sp|P23780|BGAL_MOUSE Beta-galactosidase OS=Mus musculus GN=Glb1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query491
224135029 643 predicted protein [Populus trichocarpa] 0.989 0.755 0.751 0.0
359482520 708 PREDICTED: beta-galactosidase 17-like [V 0.987 0.685 0.725 0.0
356550434 708 PREDICTED: beta-galactosidase 17-like [G 1.0 0.693 0.680 0.0
449458169 719 PREDICTED: beta-galactosidase 17-like [C 0.995 0.680 0.691 0.0
449528579 632 PREDICTED: beta-galactosidase 17-like, p 0.995 0.773 0.691 0.0
87162704492 Galactose-binding like [Medicago truncat 1.0 0.997 0.672 0.0
255572933 605 beta-galactosidase, putative [Ricinus co 0.922 0.748 0.730 0.0
357454635 694 Beta-galactosidase [Medicago truncatula] 1.0 0.707 0.672 0.0
79321216 635 beta-galactosidase 17 [Arabidopsis thali 0.987 0.763 0.646 0.0
18410234 697 beta-galactosidase 17 [Arabidopsis thali 0.987 0.695 0.646 0.0
>gi|224135029|ref|XP_002327549.1| predicted protein [Populus trichocarpa] gi|222836103|gb|EEE74524.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/491 (75%), Positives = 417/491 (84%), Gaps = 5/491 (1%)

Query: 1   MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAV 60
           MVQIENEFGSYGDDK YLHHLV LAR HLG  IILYTTDGG+RE L KGTIRGDAVF+ V
Sbjct: 158 MVQIENEFGSYGDDKAYLHHLVKLARGHLGDGIILYTTDGGSRENLEKGTIRGDAVFSTV 217

Query: 61  DFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILS 120
           DF+TG +PWPIFKLQK+FNAPGKSPPLSSEFYTGWLTHWGEK AKT ADFTAS LEKILS
Sbjct: 218 DFTTGDDPWPIFKLQKEFNAPGKSPPLSSEFYTGWLTHWGEKNAKTGADFTASALEKILS 277

Query: 121 QNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRR 180
           QNGSAVLYM HGGTNFGFYNGANTG  ESDY+PD+TSYDYDAPI ESGDV+N KF A+RR
Sbjct: 278 QNGSAVLYMVHGGTNFGFYNGANTGVDESDYKPDITSYDYDAPISESGDVENAKFNALRR 337

Query: 181 VVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQM 240
           V+E  + ASLPSV  DN K G+GPIQLQKTA LFDLLD ++PADVVESENPLSMESVGQM
Sbjct: 338 VIELHTAASLPSVPSDNGKMGYGPIQLQKTAFLFDLLDNINPADVVESENPLSMESVGQM 397

Query: 241 FGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLP 300
           FGFLLYVSE+  KD  S LLI +VHDRAQVF  C +EDNS RPT+VG+I+R S++ L LP
Sbjct: 398 FGFLLYVSEYTPKDDKSVLLIPEVHDRAQVFTLCHSEDNSRRPTHVGSIDRLSSKKLGLP 457

Query: 301 NFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVP 360
           N +C SNISLFVLVEN G VNYGPY+FD+KGILSSV+L G +L GWKMIP+PFHNLNEVP
Sbjct: 458 NAKCASNISLFVLVENQGHVNYGPYIFDKKGILSSVFLDGIILHGWKMIPIPFHNLNEVP 517

Query: 361 KISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGK 420
           KI+ I+EVA+S  I  S +++L+         PAF+ G F I+  NQ+ DT++SFSGWGK
Sbjct: 518 KINLIIEVAHSRFITVSTQRELKDKP-----VPAFFTGHFFIENANQIHDTFISFSGWGK 572

Query: 421 GIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPDFT 480
           GIA VN+FN+GR+WPSFGPQC+LYVPAPILRHGEN++VI ELESPN ELVIHSV+ PDFT
Sbjct: 573 GIAVVNDFNIGRYWPSFGPQCNLYVPAPILRHGENVLVILELESPNPELVIHSVDHPDFT 632

Query: 481 CGSIKSNVLQL 491
           CGS KS+V QL
Sbjct: 633 CGSSKSSVHQL 643

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359482520|ref|XP_002280228.2| PREDICTED: beta-galactosidase 17-like [Vitis vinifera] gi|297743091|emb|CBI35958.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356550434|ref|XP_003543592.1| PREDICTED: beta-galactosidase 17-like [Glycine max] Back     alignment and taxonomy information
>gi|449458169|ref|XP_004146820.1| PREDICTED: beta-galactosidase 17-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449528579|ref|XP_004171281.1| PREDICTED: beta-galactosidase 17-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|87162704|gb|ABD28499.1| Galactose-binding like [Medicago truncatula] Back     alignment and taxonomy information
>gi|255572933|ref|XP_002527397.1| beta-galactosidase, putative [Ricinus communis] gi|223533207|gb|EEF34963.1| beta-galactosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357454635|ref|XP_003597598.1| Beta-galactosidase [Medicago truncatula] gi|355486646|gb|AES67849.1| Beta-galactosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|79321216|ref|NP_001031273.1| beta-galactosidase 17 [Arabidopsis thaliana] gi|332197280|gb|AEE35401.1| beta-galactosidase 17 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18410234|ref|NP_565051.1| beta-galactosidase 17 [Arabidopsis thaliana] gi|75163694|sp|Q93Z24.1|BGL17_ARATH RecName: Full=Beta-galactosidase 17; Short=Lactase 17; Flags: Precursor gi|16648842|gb|AAL25611.1| At1g72990/F3N23_19 [Arabidopsis thaliana] gi|22655360|gb|AAM98272.1| At1g72990/F3N23_19 [Arabidopsis thaliana] gi|332197279|gb|AEE35400.1| beta-galactosidase 17 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query491
TAIR|locus:2032667697 BGAL17 "beta-galactosidase 17" 0.985 0.694 0.630 3e-172
DICTYBASE|DDB_G0290217671 glb1 "beta-galactosidase 1" [D 0.916 0.670 0.355 2.9e-71
ZFIN|ZDB-GENE-050309-196629 glb1l "galactosidase, beta 1-l 0.672 0.524 0.378 1.4e-70
UNIPROTKB|E1BCP9647 GLB1L "Uncharacterized protein 0.678 0.514 0.359 1.3e-63
UNIPROTKB|F1SR82652 GLB1L "Uncharacterized protein 0.678 0.510 0.367 4.2e-63
UNIPROTKB|Q6UWU2654 GLB1L "Beta-galactosidase-1-li 0.678 0.509 0.359 1.3e-61
RGD|1309474646 Glb1l "galactosidase, beta 1-l 0.678 0.515 0.356 8.8e-61
UNIPROTKB|E2RF96651 GLB1L "Uncharacterized protein 0.668 0.503 0.355 8.8e-61
UNIPROTKB|F1PCD7644 GLB1L "Uncharacterized protein 0.668 0.509 0.355 8.8e-61
MGI|MGI:1921827646 Glb1l "galactosidase, beta 1-l 0.678 0.515 0.348 2e-59
TAIR|locus:2032667 BGAL17 "beta-galactosidase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1674 (594.3 bits), Expect = 3.0e-172, P = 3.0e-172
 Identities = 311/493 (63%), Positives = 390/493 (79%)

Query:     1 MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAV 60
             MVQIENE+GSYG+DK YL  LV++AR HLG DII+YTTDGGT+ETL KGT+    V++AV
Sbjct:   212 MVQIENEYGSYGNDKAYLRKLVSMARGHLGDDIIVYTTDGGTKETLDKGTVPVADVYSAV 271

Query:    61 DFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILS 120
             DFSTG +PWPIFKLQK+FNAPG+SPPLSSEFYTGWLTHWGEKI KTDA+FTA+ LEKILS
Sbjct:   272 DFSTGDDPWPIFKLQKKFNAPGRSPPLSSEFYTGWLTHWGEKITKTDAEFTAASLEKILS 331

Query:   121 QNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRR 180
             +NGSAVLYM HGGTNFGFYNGANTG+ ESDY+PDLTSYDYDAPIKESGD+DNPKF+A++R
Sbjct:   332 RNGSAVLYMVHGGTNFGFYNGANTGSEESDYKPDLTSYDYDAPIKESGDIDNPKFQALQR 391

Query:   181 VVEKFSPASLPSVLPDN-EKAGFGPIQLQKTAXXXXXXXXXXXXXXXESENPLSMESVGQ 239
             V++K++ +  P + P N ++  +G I++Q T                 S NP+SMESVGQ
Sbjct:   392 VIKKYNASPHP-ISPSNKQRKAYGSIKMQMTTSLFDLVRMTDPADVITSANPISMESVGQ 450

Query:   240 MFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTED-NSGRPTYVGTIERWSNRALS 298
             MFGFLLY S +  K  G++L I KVHDRAQVF+SC ++D + G   Y+GT ERW+N+ +S
Sbjct:   451 MFGFLLYESSYIAKKSGNTLRIPKVHDRAQVFVSCLSQDVDVGVLRYIGTTERWNNQPIS 510

Query:   299 LPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNE 358
             LP   C +N SLF+LVENMGRVNYGPY+FD+KGILSSVYL G++L GWKMIP+PFHNLN+
Sbjct:   511 LPTIECTTNTSLFILVENMGRVNYGPYIFDDKGILSSVYLDGQILHGWKMIPIPFHNLNQ 570

Query:   359 VPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGW 418
              P ++   E+ ++     S + +L ++ G   KEPA + G FSI+   ++KDTYLSF+GW
Sbjct:   571 EPNLT--FEMQHTK--NRSKKFELTNDVGR--KEPALFAGEFSINSEEEIKDTYLSFNGW 624

Query:   419 GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQPD 478
             GKG+AFVNEFN+GR+WPS GPQC+LYVPAP+L+ G+N +V+FELESP+ EL + +V+  D
Sbjct:   625 GKGVAFVNEFNIGRYWPSVGPQCNLYVPAPLLKRGKNTLVVFELESPHLELSLEAVDHQD 684

Query:   479 FTCGSIKSNVLQL 491
             FTCGS  S V QL
Sbjct:   685 FTCGSNVSKVNQL 697
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004565 "beta-galactosidase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0016926 "protein desumoylation" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA
DICTYBASE|DDB_G0290217 glb1 "beta-galactosidase 1" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050309-196 glb1l "galactosidase, beta 1-like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BCP9 GLB1L "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SR82 GLB1L "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q6UWU2 GLB1L "Beta-galactosidase-1-like protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1309474 Glb1l "galactosidase, beta 1-like" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2RF96 GLB1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PCD7 GLB1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1921827 Glb1l "galactosidase, beta 1-like" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0DGD7BGAL8_ORYSJ3, ., 2, ., 1, ., 2, 30.60160.97750.7132yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.230.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.44.267.1
hypothetical protein (643 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pg.C_LG_I000259
hypothetical protein (1110 aa)
     •  0.916
estExt_fgenesh4_pm.C_LG_III0678
hypothetical protein (1114 aa)
     •  0.916
gw1.XIX.1583.1
alpha-galactosidase (380 aa)
     •  0.912
fgenesh4_pm.C_LG_IV000085
hypothetical protein (379 aa)
     •  0.911
fgenesh4_pg.C_scaffold_164000005
alpha-galactosidase (EC-3.2.1.22) (367 aa)
     •  0.911
eugene3.00101110
alpha-galactosidase (EC-3.2.1.22) (386 aa)
     •  0.910
gw1.X.3030.1
alpha-galactosidase (EC-2.4.1.67) (369 aa)
     •  0.910
gw1.X.2350.1
hypothetical protein (442 aa)
     •• 0.900
gw1.VI.1302.1
galactokinase (EC-2.7.1.6) (413 aa)
     •  0.899
gw1.148.154.1
hypothetical protein (545 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query491
pfam01301318 pfam01301, Glyco_hydro_35, Glycosyl hydrolases fam 7e-63
PLN03059 840 PLN03059, PLN03059, beta-galactosidase; Provisiona 8e-09
COG1874673 COG1874, LacA, Beta-galactosidase [Carbohydrate tr 2e-08
pfam13364109 pfam13364, BetaGal_dom4_5, Beta-galactosidase jell 7e-05
>gnl|CDD|216423 pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35 Back     alignment and domain information 
 Score =  207 bits (528), Expect = 7e-63
 Identities = 80/185 (43%), Positives = 103/185 (55%), Gaps = 9/185 (4%)

Query: 1   MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAV 60
           +VQIENE+GSYG DK YL  L  L R       +L+TTDG     L  G +    ++   
Sbjct: 143 LVQIENEYGSYGVDKAYLQALRKLYREWGADMAVLFTTDGPWGMCLQCGDLPDPVIYTTN 202

Query: 61  DFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILS 120
            F  GA P  IF L + F+  G  P + SEF+TGW  HWG       A+  A  +E+ L+
Sbjct: 203 GFGCGANPTSIFGLLRPFSPNG--PLMWSEFWTGWFDHWGGPHHHRPAEDLAFSVERFLA 260

Query: 121 QNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRR 180
           +  S  LYM HGGTNFGF NGAN       Y P  TSYDYDAP+ E+GD   PK+ A+R 
Sbjct: 261 RGSSVNLYMFHGGTNFGFTNGAN------FYGPQTTSYDYDAPLDEAGDP-TPKYGALRD 313

Query: 181 VVEKF 185
           ++  +
Sbjct: 314 LIAAY 318

Length = 318
>gnl|CDD|166698 PLN03059, PLN03059, beta-galactosidase; Provisional Back     alignment and domain information
>gnl|CDD|224786 COG1874, LacA, Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|222076 pfam13364, BetaGal_dom4_5, Beta-galactosidase jelly roll domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 491
PLN03059840 beta-galactosidase; Provisional 100.0
KOG0496649 consensus Beta-galactosidase [Carbohydrate transpo 100.0
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 100.0
COG1874673 LacA Beta-galactosidase [Carbohydrate transport an 99.38
PF13364111 BetaGal_dom4_5: Beta-galactosidase jelly roll doma 99.35
PF13364111 BetaGal_dom4_5: Beta-galactosidase jelly roll doma 98.22
PF02837167 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug 97.67
PF02837167 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug 97.14
PRK10150 604 beta-D-glucuronidase; Provisional 94.51
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 94.36
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 93.76
KOG0496649 consensus Beta-galactosidase [Carbohydrate transpo 93.59
PRK10150 604 beta-D-glucuronidase; Provisional 93.04
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 92.62
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 90.87
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 88.67
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.7e-99  Score=828.50  Aligned_cols=432  Identities=25%  Similarity=0.382  Sum_probs=335.6

Q ss_pred             CccccccCCCC-----CCCHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCcCCCeeeeecCCCCCCCCchhHHhH
Q 011205            1 MVQIENEFGSY-----GDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQ   75 (491)
Q Consensus         1 mvQvENEYg~y-----~~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~~~~~v~~~~~f~~~~~~~~~f~~~   75 (491)
                      |+|||||||+|     ++|++||+||++++++ .|++|||||||+..       .+++  ++.|+|-    ...+.|.. 
T Consensus       180 mvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~-~Gi~VPl~t~dg~~-------~~~~--v~~t~Ng----~~~~~f~~-  244 (840)
T PLN03059        180 LSQIENEYGPVEWEIGAPGKAYTKWAADMAVK-LGTGVPWVMCKQED-------APDP--VIDTCNG----FYCENFKP-  244 (840)
T ss_pred             EEEecccccceecccCcchHHHHHHHHHHHHH-cCCCcceEECCCCC-------CCcc--ceecCCC----chhhhccc-
Confidence            79999999998     6899999999999999 89999999999752       2333  7777772    12223332 


Q ss_pred             HHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCe-eeEEEeecccCCCCcCCCCCCCCCCCCCCc
Q 011205           76 KQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGS-AVLYMAHGGTNFGFYNGANTGNTESDYQPD  154 (491)
Q Consensus        76 ~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~Ga~~~~~~~~~~p~  154 (491)
                          ..+.+|+|+||||+|||++||++++.+++++++..+++||++|+| +|||||||||||||||||+       +  +
T Consensus       245 ----~~~~~P~m~tE~w~GWf~~wG~~~~~r~~~d~a~~~~~~l~~g~S~~N~YMfhGGTNFG~~~Ga~-------~--~  311 (840)
T PLN03059        245 ----NKDYKPKMWTEAWTGWYTEFGGAVPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGP-------F--I  311 (840)
T ss_pred             ----CCCCCCcEEeccCchhHhhcCCCCCcCCHHHHHHHHHHHHHcCCeeEEeeeccCcCCcccccCCC-------c--c
Confidence                122479999999999999999999999999999999999999999 7999999999999999987       3  7


Q ss_pred             ccccCCCCccCCCCCCChHHHHHHHHHHHhh--CCCCCCCCCC-CC-----------C--------ccccc---ceeee-
Q 011205          155 LTSYDYDAPIKESGDVDNPKFKAIRRVVEKF--SPASLPSVLP-DN-----------E--------KAGFG---PIQLQ-  208 (491)
Q Consensus       155 ~TSYDY~Api~E~G~~t~pKy~~lr~~i~~~--~~~~l~~~p~-~~-----------~--------~~~y~---~v~~~-  208 (491)
                      +|||||||||+|+|++|+|||.+||++++.+  .+..++..++ ..           +        ++.|+   .++++ 
T Consensus       312 ~TSYDYdAPL~E~G~~t~pKy~~lr~l~~~~~~~~~~l~~~~p~~~~lg~~~ea~~y~~~~~caaFl~n~~~~~~~~v~f  391 (840)
T PLN03059        312 ATSYDYDAPLDEYGLPREPKWGHLRDLHKAIKLCEPALVSVDPTVTSLGSNQEAHVFKSKSACAAFLANYDTKYSVKVTF  391 (840)
T ss_pred             ccccccCCccccccCcchhHHHHHHHHHHHHHhcCccccCCCCceeccCCceeEEEccCccchhhheeccCCCCceeEEE
Confidence            9999999999999999988999999999887  2222322222 11           2        34455   45544 


Q ss_pred             -----------------ceeeccccccc------c--CCC----------Cccc---cCCCcccccc-------CCccce
Q 011205          209 -----------------KTALLFDLLDV------L--DPA----------DVVE---SENPLSMESV-------GQMFGF  243 (491)
Q Consensus       209 -----------------~~~~L~~~l~~------~--~~~----------~~~~---s~~p~~~E~l-------gq~~Gy  243 (491)
                                       ...+||+++.+      +  .+.          +++.   ++.|++||+|       +|.+||
T Consensus       392 ~g~~y~lp~~Svsilpd~~~~lfnta~v~~q~~~~~~~~~~~~~~w~~~~e~~~~~~~~~~~~~e~l~e~~n~t~d~~dY  471 (840)
T PLN03059        392 GNGQYDLPPWSVSILPDCKTAVFNTARLGAQSSQMKMNPVGSTFSWQSYNEETASAYTDDTTTMDGLWEQINVTRDATDY  471 (840)
T ss_pred             CCcccccCccceeecccccceeeeccccccccceeecccccccccceeecccccccccCCCcchhhHHHhhcccCCCCce
Confidence                             23445555543      1  110          0002   2348999999       999999


Q ss_pred             EEEEEeeCCCCCC--------ceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEccc-cceeEec--ccccCCCcEEEE
Q 011205          244 LLYVSEFGGKDYG--------SSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWS-NRALSLP--NFRCGSNISLFV  312 (491)
Q Consensus       244 vlYrt~~~~~~~~--------~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~-~~~~~lp--~~~~~~~~~L~I  312 (491)
                      +||||+|......        .+|+|.+++|+++||||         |+++|++.+.. +..+.++  +....+.++|+|
T Consensus       472 lwY~t~i~~~~~~~~~~~~~~~~L~v~~~~d~~~vFVN---------g~~~Gt~~~~~~~~~~~~~~~v~l~~g~n~L~i  542 (840)
T PLN03059        472 LWYMTEVHIDPDEGFLKTGQYPVLTIFSAGHALHVFIN---------GQLAGTVYGELSNPKLTFSQNVKLTVGINKISL  542 (840)
T ss_pred             EEEEEEEeecCCccccccCCCceEEEcccCcEEEEEEC---------CEEEEEEEeecCCcceEEecccccCCCceEEEE
Confidence            9999999765322        35999999999999999         99999998754 3345554  223346789999


Q ss_pred             EEEeCCccccCcCccC-CccceeeEEECC-----EEecCeE-EEeecCCCCCCCCCcccccccccccchhhhhhhhcccc
Q 011205          313 LVENMGRVNYGPYMFD-EKGILSSVYLGG-----KVLRGWK-MIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHN  385 (491)
Q Consensus       313 LvEn~Gr~NyG~~~~~-~KGI~g~V~l~g-----~~l~~W~-~~~l~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  385 (491)
                      |||||||+|||++|+. +|||+|+|+|+|     +.|++|+ +|+++|+++.  .+++...+..+..|.+.        +
T Consensus       543 Lse~vG~~NyG~~le~~~kGI~g~V~i~g~~~g~~dls~~~W~y~lgL~GE~--~~i~~~~~~~~~~W~~~--------~  612 (840)
T PLN03059        543 LSVAVGLPNVGLHFETWNAGVLGPVTLKGLNEGTRDLSGWKWSYKIGLKGEA--LSLHTITGSSSVEWVEG--------S  612 (840)
T ss_pred             EEEeCCCCccCcccccccccccccEEEecccCCceecccCccccccCcccee--ccccccCCCCCcccccc--------c
Confidence            9999999999999975 999999999988     7899999 8999998653  22333322223445321        1


Q ss_pred             CCCCCCCceEEEEEEeeCCCCCccceEEEeCCCceEEEEECCeeceeccCCC--------------------------CC
Q 011205          386 AGNITKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSF--------------------------GP  439 (491)
Q Consensus       386 ~~~~~~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~~KG~v~VNG~nlGRYW~~~--------------------------GP  439 (491)
                      ......+|+|||++|++|.+.  ++|||||++||||+|||||+||||||+ +                          ||
T Consensus       613 ~~~~~~p~twYK~~Fd~p~g~--Dpv~LDm~gmGKG~aWVNG~nIGRYW~-~~a~~~gC~~c~y~g~~~~~kc~~~cggP  689 (840)
T PLN03059        613 LLAQKQPLTWYKTTFDAPGGN--DPLALDMSSMGKGQIWINGQSIGRHWP-AYTAHGSCNGCNYAGTFDDKKCRTNCGEP  689 (840)
T ss_pred             cccCCCCceEEEEEEeCCCCC--CCEEEecccCCCeeEEECCcccccccc-cccccCCCccccccccccchhhhccCCCc
Confidence            123334699999999998764  249999999999999999999999995 5                          99


Q ss_pred             eeeEe-cCCccccccCcEEEEEEecCCCCcceEEE-eecccccccc
Q 011205          440 QCDLY-VPAPILRHGENLVVIFELESPNSELVIHS-VNQPDFTCGS  483 (491)
Q Consensus       440 Q~tlY-VP~~~Lk~G~N~ivvfE~~~~~~~~~~~~-~~~~~~~~~~  483 (491)
                      ||+|| ||++|||+|+|+|||||++++++. .|.+ +....-.|+.
T Consensus       690 ~q~lYHVPr~~Lk~g~N~lViFEe~gg~p~-~I~~~~~~~~~~c~~  734 (840)
T PLN03059        690 SQRWYHVPRSWLKPSGNLLIVFEEWGGNPA-GISLVKRTTDSVCAD  734 (840)
T ss_pred             eeEEEeCcHHHhccCCceEEEEEecCCCCC-ceEEEEeecCccccc
Confidence            99999 999999999999999999998887 4554 4445566654

>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A Back     alignment and domain information
>PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A Back     alignment and domain information
>PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query491
3thc_A654 Crystal Structure Of Human Beta-Galactosidase In Co 3e-68
4e8c_A595 Crystal Structure Of Streptococcal Beta-Galactosida 1e-54
3d3a_A612 Crystal Structure Of A Beta-Galactosidase From Bact 4e-49
>pdb|3THC|A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose Length = 654 Back     alignment and structure 
Iteration: 1

 Score =  255 bits (652), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 172/469 (36%), Positives = 246/469 (52%), Gaps = 36/469 (7%)
Query: 2   VQIENEFGSY-GDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAV 60
           VQ+ENE+GSY   D +YL  L    R HLG D++L+TTDG  +  L  G ++G  ++  V
Sbjct: 160 VQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQG--LYTTV 217
Query: 61  DFSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILS 120
           DF TG+     F  Q++     K P ++SEFYTGWL HWG+  +    +  AS L  IL+
Sbjct: 218 DFGTGSNITDAFLSQRKCEP--KGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILA 275
Query: 121 QNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRR 180
           +  S  LYM  GGTNF ++NGAN     S Y    TSYDYDAP+ E+GD+   K+ A+R 
Sbjct: 276 RGASVNLYMFIGGTNFAYWNGAN-----SPYAAQPTSYDYDAPLSEAGDLTE-KYFALRN 329
Query: 181 VVEKFSPASLPSVLPDNEKAGFGPIQLQKTAXXXXXXXXXXXXXXXESENPLSMESVGQM 240
           +++KF       + P   K  +G + L+K                 +S  PL+   V Q 
Sbjct: 330 IIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQH 389
Query: 241 FGFLLYVSEFGGKDYGSSLL---ISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRAL 297
           +GF+LY +         + L   ++ VHDRA V +        G P   G +ER  N  +
Sbjct: 390 YGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAV-------DGIPQ--GVLER--NNVI 438
Query: 298 SLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLN 357
           +L N    +  +L +LVENMGRVNYG Y+ D KG++S++ L   +L  W + P     L+
Sbjct: 439 TL-NITGKAGATLDLLVENMGRVNYGAYINDFKGLVSNLTLSSNILTDWTIFP-----LD 492
Query: 358 EVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDK--VNQVKDTYLSF 415
               +   L   +         +   HN+ N T  PAFY+G FSI     +  +DT++ F
Sbjct: 493 TEDAVRSHLG-GWGHRDSGHHDEAWAHNSSNYTL-PAFYMGNFSIPSGIPDLPQDTFIQF 550
Query: 416 SGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPIL-RHGENLVVIFELE 463
            GW KG  ++N FNLGR+WP+ GPQ  L+VP  IL     N + + ELE
Sbjct: 551 PGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELE 599
>pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose Length = 595 Back     alignment and structure
>pdb|3D3A|A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron Length = 612 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query491
4e8d_A595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 1e-119
3thd_A654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 1e-116
3d3a_A612 Beta-galactosidase; protein structure initiative I 1e-116
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 1e-33
3og2_A1003 Beta-galactosidase; TIM barrel domain, glycoside h 2e-12
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 2e-33
1tg7_A971 Beta-galactosidase; TIM barrel domain, glycoside h 1e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
3u7v_A552 Beta-galactosidase; structural genomics, PSI-biolo 2e-06
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Length = 595 Back     alignment and structure
 Score =  362 bits (930), Expect = e-119
 Identities = 164/483 (33%), Positives = 227/483 (46%), Gaps = 49/483 (10%)

Query: 1   MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAV 60
           M+Q+ENE+GSYG+DK YL  +  L     G    L+T+DG  R TL  GT+  + +F   
Sbjct: 150 MMQVENEYGSYGEDKAYLRAIRQLME-ECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTG 208

Query: 61  DFSTGAEPWPIFKLQKQFNAPGKSPPLS-SEFYTGWLTHWGEKIAKTDADFTASYLEKIL 119
           +F + A P+   ++Q+ F+  GK  PL   EF+ GW   W E I   D    A  + ++L
Sbjct: 209 NFGSKA-PYNFSQMQEFFDEHGKKWPLMCMEFWDGWFNRWKEPIITRDPKELADAVREVL 267

Query: 120 SQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIR 179
            + GS  LYM HGGTNFGF NG +   T     P +TSYDYDA + E G+    K+ A++
Sbjct: 268 -EQGSINLYMFHGGTNFGFMNGCSARGT--LDLPQVTSYDYDALLDEEGNP-TAKYLAVK 323

Query: 180 RVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQ 239
           +++               E      I L +   LF+ LD L     VES  P  ME +GQ
Sbjct: 324 KMMATHFSEYPQLEPLYKESMELDAIPLVEKVSLFETLDSLSSP--VESLYPQKMEELGQ 381

Query: 240 MFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSL 299
            +G+LLY +E         L I    DRAQ+++            +V T  +        
Sbjct: 382 SYGYLLYRTETNWDAEEERLRIIDGRDRAQLYVDG---------QWVKTQYQTEIGEDIF 432

Query: 300 PNFRCGSNISLFVLVENMGRVNYGPYMF---DEKGILSSVYLGGKVLRGWKMIPVPFHNL 356
              +      L +L+ENMGRVNYG         KGI + V      L  WK  P+P  N 
Sbjct: 433 YQGKKKGLSRLDILIENMGRVNYGHKFLADTQRKGIRTGVCKDLHFLLNWKHYPLPLDNP 492

Query: 357 NEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFS 416
                                   K++ + G    +PAFY   F+++   + KDTYL  S
Sbjct: 493 E-----------------------KIDFSKGWTQGQPAFYAYDFTVE---EPKDTYLDLS 526

Query: 417 GWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIHSVNQ 476
            +GKG+AFVN  NLGRFW   GP   LY+P   L+ G N ++IFE E    E  IH   +
Sbjct: 527 EFGKGVAFVNGQNLGRFWNV-GPTLSLYIPHSYLKEGANRIIIFETEGQYKE-EIHLTRK 584

Query: 477 PDF 479
           P  
Sbjct: 585 PTL 587
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Length = 654 Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query491
3thd_A654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 100.0
4e8d_A595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 100.0
3d3a_A612 Beta-galactosidase; protein structure initiative I 100.0
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 100.0
1tg7_A971 Beta-galactosidase; TIM barrel domain, glycoside h 100.0
1kwg_A645 Beta-galactosidase; TIM barrel, glycoside hydrolas 97.37
3fn9_A 692 Putative beta-galactosidase; structural genomics, 95.9
3lpf_A 605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 95.71
3hn3_A 613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 95.67
3fn9_A 692 Putative beta-galactosidase; structural genomics, 95.63
3lpf_A 605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 95.47
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 95.44
3cmg_A 667 Putative beta-galactosidase; structural genomics, 95.21
3cmg_A 667 Putative beta-galactosidase; structural genomics, 94.88
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 94.52
3u7v_A552 Beta-galactosidase; structural genomics, PSI-biolo 94.03
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 93.89
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 93.65
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 93.55
2je8_A 848 Beta-mannosidase; glycoside hydrolase, hydrolase; 93.34
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 93.15
3hn3_A 613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 92.95
1vem_A516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 92.85
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 92.83
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 92.61
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 92.1
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 91.17
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 91.07
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 90.78
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 90.39
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 88.94
2je8_A 848 Beta-mannosidase; glycoside hydrolase, hydrolase; 88.73
3tty_A675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 86.28
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-118  Score=970.09  Aligned_cols=455  Identities=37%  Similarity=0.642  Sum_probs=383.2

Q ss_pred             CccccccCCCCC-CCHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCcCCCeeeeecCCCCCCCCchhHHhHHHhc
Q 011205            1 MVQIENEFGSYG-DDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFN   79 (491)
Q Consensus         1 mvQvENEYg~y~-~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~~~~~v~~~~~f~~~~~~~~~f~~~~~~~   79 (491)
                      |+|||||||+|+ ||++||+||++++|++.|++|||||||++....+.||++++  +++++||+++.++...|+.+++++
T Consensus       159 ~~QvENEyG~y~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~~~~~~~~~g~~~g--~~~t~~f~~~~~~~~~~~~~~~~~  236 (654)
T 3thd_A          159 TVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQG--LYTTVDFGTGSNITDAFLSQRKCE  236 (654)
T ss_dssp             EEECSSCGGGSSCCCHHHHHHHHHHHHHHHCSSSEEEEEEESSHHHHHHHCBTT--BEEEEECCTTSCHHHHHHHHHHHC
T ss_pred             EEEecccccccccccHHHHHHHHHHHHHhcCCceeeEeecCCccccccCCCcCC--cceecccCCCccHHHHHHHHHHhC
Confidence            689999999997 79999999999999966999999999998766789999988  999999986655667788888883


Q ss_pred             CCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEeecccCCCCcCCCCCCCCCCCCCCcccccC
Q 011205           80 APGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYD  159 (491)
Q Consensus        80 ~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~hGGTNfG~~~Ga~~~~~~~~~~p~~TSYD  159 (491)
                        |++|+||+|||+||||+||++++.+++++++..+++|+++|+|+|||||||||||||||||+.     .|+|++||||
T Consensus       237 --p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~N~YM~hGGTNfG~~~Ga~~-----~~~~~~TSYD  309 (654)
T 3thd_A          237 --PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGANS-----PYAAQPTSYD  309 (654)
T ss_dssp             --SSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHTTCEEEEECSBCCBCCTTCBCEET-----TTEECCSBCC
T ss_pred             --CCCCeEEeccccccCCcCCCCCCCCCHHHHHHHHHHHHhcCCceEEEecccccccccccCCCC-----CCCCccccCc
Confidence              478999999999999999999999999999999999999999999999999999999999983     3889999999


Q ss_pred             CCCccCCCCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCcccccceeeeceeeccccccccCCCCccccCCCccccccCC
Q 011205          160 YDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQ  239 (491)
Q Consensus       160 Y~Api~E~G~~t~pKy~~lr~~i~~~~~~~l~~~p~~~~~~~y~~v~~~~~~~L~~~l~~~~~~~~~~s~~p~~~E~lgq  239 (491)
                      |||||+|+|++| |||.++|++|++|...+++++|++.++++|++|+++..++||+.++.+++.++++++.|++||+|+|
T Consensus       310 YdApi~E~G~~t-~Ky~~lr~li~~~~~~~~~~~P~~~p~~~~~~v~l~~~~~L~~~l~~l~~~~~~~s~~P~tmE~l~Q  388 (654)
T 3thd_A          310 YDAPLSEAGDLT-EKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQ  388 (654)
T ss_dssp             TTCSBCTTCCBC-HHHHHHHHHHTTTSCCCCSCCCCCCCBCCCEEEECEEEEETTTTHHHHCTTCCEEESSCCBTGGGTC
T ss_pred             CCCccccccCcc-HHHHHHHHHHHHhcCCCCCCCCCCCcccccCcEeecccccHHHHHHhhCcCCCcccCCCCCHHHhCC
Confidence            999999999999 5999999999999988888888889999999999999999999998887555789999999999999


Q ss_pred             ccceEEEEEeeCCC-CCCceeE--ecCcCcEEEEEEcCCCCCCCCCCeEEEEEEccccceeEecccccCCCcEEEEEEEe
Q 011205          240 MFGFLLYVSEFGGK-DYGSSLL--ISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVEN  316 (491)
Q Consensus       240 ~~GyvlYrt~~~~~-~~~~~L~--i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~~~~~~lp~~~~~~~~~L~ILvEn  316 (491)
                      ++|||||||++... ..+..|+  +.++||||+||||         |+++|+++|....++.++.   +..++|+|||||
T Consensus       389 ~~GyvlY~t~i~~~~~~~~~l~l~~~~v~Dra~Vfvd---------g~~~G~l~r~~~~~l~~~~---~~~~~L~ILVEN  456 (654)
T 3thd_A          389 HYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVD---------GIPQGVLERNNVITLNITG---KAGATLDLLVEN  456 (654)
T ss_dssp             CSSEEEEEEECSSCEEEEEEEECTTCCEESEEEEEET---------TEEEEEEETTTBCEEEEEE---CTTCEEEEEEEC
T ss_pred             CcCeEEEEeecCCCCCCCcceeeccCCcceEEEEEEC---------CEEEEEEecccceeEeccC---CCCCEEEEEEEc
Confidence            99999999999753 1333455  5789999999999         9999999985433344432   235799999999


Q ss_pred             CCccccCcCccCCccceeeEEECCEEecCeEEEeecCCCCCCCCCcccccccccccchhhhhhhhccccCCCCCCCceEE
Q 011205          317 MGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFY  396 (491)
Q Consensus       317 ~Gr~NyG~~~~~~KGI~g~V~l~g~~l~~W~~~~l~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~p~~y  396 (491)
                      |||||||+.+.|+|||+|+|+|+++.|++|+|++|+++...... +..............     | ........+|+||
T Consensus       457 ~GRvNyG~~i~d~KGi~g~V~l~~~~l~~W~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~-----~-~~~~~~~~~P~fy  529 (654)
T 3thd_A          457 MGRVNYGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSH-LGGWGHRDSGHHDEA-----W-AHNSSNYTLPAFY  529 (654)
T ss_dssp             CCCBCSSGGGCCCCEECSCCEETTEECCCEEEEECCHHHHHHTT-TTTTCCC--------------------CCCCCEEE
T ss_pred             CCccccCCCCCCCCCCCCceEECCEEcCCcEEEeeccchhhhhh-hcccccccccccccc-----c-cccccCCCCCEEE
Confidence            99999999999999999999999999999999999886421100 000000000000000     0 0112234579999


Q ss_pred             EEEEeeCCC--CCccceEEEeCCCceEEEEECCeeceeccCCCCCeeeEecCCcccccc-CcEEEEEEecCCCCc-----
Q 011205          397 VGRFSIDKV--NQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHG-ENLVVIFELESPNSE-----  468 (491)
Q Consensus       397 ~~~f~i~~~--~~~~Dt~Ld~~g~~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G-~N~ivvfE~~~~~~~-----  468 (491)
                      +++|+|+..  +.+.||||||+||+||+||||||||||||+++|||+|||||++|||+| +|+|||||+++..+.     
T Consensus       530 ~g~f~i~~~~~~~p~DTFLd~~gWgKGvV~VNG~NLGRYW~~~GPQ~TLYvP~p~Lk~G~~NeIiVfEle~~~~~~~~~~  609 (654)
T 3thd_A          530 MGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPE  609 (654)
T ss_dssp             EEEECCCSSCTTCSCBEEEECTTCCSEEEEETTEEEEEECTTTCSCCCEEECGGGCCSSSCEEEEEEESSCCSCSSSCGG
T ss_pred             EEEEEccCCCCCCCCCEEEeCCCCCeEEEEECCcccccccCCCCCeEEEEecHHHhCCCCCceEEEEEeecCCccccccc
Confidence            999999752  125799999999999999999999999998899999999999999997 999999999975544     


Q ss_pred             -ceEEEeeccccccccc
Q 011205          469 -LVIHSVNQPDFTCGSI  484 (491)
Q Consensus       469 -~~~~~~~~~~~~~~~~  484 (491)
                       +.|+|+++|+++.+.-
T Consensus       610 ~~~i~~~~~P~l~~~~~  626 (654)
T 3thd_A          610 LCAVTFVDRPVIGSSVT  626 (654)
T ss_dssp             GSEEEEESSCCCSCC--
T ss_pred             cceEEeecccccCCCCC
Confidence             6899999999988654
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 491
d1tg7a5354 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter 2e-29
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Glycosyl hydrolases family 35 catalytic domain
domain: Beta-galactosidase LacA, N-terminal domain
species: Penicillium sp. [TaxId: 5081]

 Score =  116 bits (291), Expect = 2e-29
 Identities = 42/212 (19%), Positives = 70/212 (33%), Gaps = 35/212 (16%)

Query: 1   MVQIENEFGSYGDD------KEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGD 54
           + Q ENE+              Y+ ++   AR   G  +   + D         GT  G 
Sbjct: 154 LYQPENEYSGACCGYNGFPDGSYMQYIEDHARDA-GIVVPFISNDAWAAGHNAPGTGAGA 212

Query: 55  A-VFAAVDFSTG----------AEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKI 103
             ++    +  G          +   P +           +P    EF  G    WG   
Sbjct: 213 VDIYGHDSYPLGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVG 272

Query: 104 AKTDADFTASYLEKILSQNGSAV------LYMAHGGTNFGFYNGANTGNTESDYQPDLTS 157
               A       E++  +N  +       LYM  GGTN+G             +    TS
Sbjct: 273 FAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLG----------HPGGYTS 322

Query: 158 YDYDAPIKESGDVDNPKFKAIRRVVEKFSPAS 189
           YDY + I ES ++   K+ +  +++  F+  S
Sbjct: 323 YDYGSAISESRNITREKY-SELKLLGNFAKVS 353

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query491
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 99.96
d1tg7a3163 Beta-galactosidase LacA, domains 4 and 5 {Penicill 99.34
d1tg7a2182 Beta-galactosidase LacA, domains 4 and 5 {Penicill 98.39
d2vzsa4184 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 97.02
d1bhga2204 beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 96.82
d1jz8a3207 beta-Galactosidase {Escherichia coli [TaxId: 562]} 96.48
d2vzsa4184 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 96.37
d1yq2a3216 beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 96.0
d1tg7a2182 Beta-galactosidase LacA, domains 4 and 5 {Penicill 95.91
d1yq2a3216 beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 95.79
d1jz8a3207 beta-Galactosidase {Escherichia coli [TaxId: 562]} 95.69
d1bhga2204 beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 95.24
d2je8a4192 Beta-mannosidase {Bacteroides thetaiotaomicron [Ta 94.5
d2je8a4192 Beta-mannosidase {Bacteroides thetaiotaomicron [Ta 94.23
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Glycosyl hydrolases family 35 catalytic domain
domain: Beta-galactosidase LacA, N-terminal domain
species: Penicillium sp. [TaxId: 5081]

Probab=99.96  E-value=1.6e-30  Score=265.22  Aligned_cols=172  Identities=23%  Similarity=0.284  Sum_probs=127.4

Q ss_pred             CccccccCCCCC------CCHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCcCC-CeeeeecCCC----CCC---
Q 011205            1 MVQIENEFGSYG------DDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRG-DAVFAAVDFS----TGA---   66 (491)
Q Consensus         1 mvQvENEYg~y~------~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~~~-~~v~~~~~f~----~~~---   66 (491)
                      |+|||||||.+.      ++++||++|++++++ .++++|++|+|++.......|.+.+ .++++...+.    +..   
T Consensus       154 ~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~~~~~~~~~~~~~g~~~~~~d~yg~~~~~~~~~~~~~~~  232 (354)
T d1tg7a5         154 LYQPENEYSGACCGYNGFPDGSYMQYIEDHARD-AGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPST  232 (354)
T ss_dssp             EECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHH-TTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTC
T ss_pred             EEEeccccCccccccccchHHHHHHHHHhhhhc-cCcccceEeccchhhccCCCCcccccccccccccCCCccccCCccc
Confidence            689999999753      379999999999999 8999999999998776666666432 3455543332    110   


Q ss_pred             ----CC-chhHHhHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHH-----HHHcCC-eeeEEEeecccC
Q 011205           67 ----EP-WPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEK-----ILSQNG-SAVLYMAHGGTN  135 (491)
Q Consensus        67 ----~~-~~~f~~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~-----~l~~g~-s~n~YM~hGGTN  135 (491)
                          +. ...+...+..  .+..|.|++||++||+++||+..+.++++.++..+.+     .++.|. ++||||||||||
T Consensus       233 ~~~~~~~~~~~~~~~~~--~p~~p~~~~E~~~g~~~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~YM~~GGTn  310 (354)
T d1tg7a5         233 WPSGNLPTYFHTSHEQQ--SPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTN  310 (354)
T ss_dssp             CCTTCSCCCHHHHHHHH--CTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBC
T ss_pred             ccccccchHHHHHHhhc--CCccceeeeccccccccccCCCccccCHHHHHHHHHHHHHhhhhhccccceEEeEEecccC
Confidence                11 1112222333  3478999999999999999998776666555444443     455565 689999999999


Q ss_pred             CCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHHHHhhC
Q 011205          136 FGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFS  186 (491)
Q Consensus       136 fG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~i~~~~  186 (491)
                      ||+++          +.|++|||||+|||+|+|++|+ +|++.+++|.+|.
T Consensus       311 fG~~~----------~~~~~tsYdy~api~e~G~~~~-~yy~~~k~l~~~~  350 (354)
T d1tg7a5         311 WGNLG----------HPGGYTSYDYGSAISESRNITR-EKYSELKLLGNFA  350 (354)
T ss_dssp             CTTCB----------CTTSCSBCCTTCSBCTTCCCCS-HHHHHHHHHHHHH
T ss_pred             CCCCC----------CCCCCCCCCCCCeECcCCCCCH-HHHHHHHHHHHHh
Confidence            99985          3458899999999999999996 7777777887774
>d1tg7a3 b.18.1.27 (A:849-1011) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure