Citrus Sinensis ID: 011220

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

MLPYSKLPSPDPPPKKSKFPELDQKSSLNGLIYPTLSLQSPRSWLLLVILLLQVIFVLVLRSVSMSFSTSHVAPQQSHPEISASVPRVSDQCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRIKEQQELGFKW

cccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEcccHHHcHHHHHccccccccccccccccccccccccccccccccccccccHHcccccHHHHHHHHHHHcccccccccccccEEEEcccEEEEEEccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHccccccccccccccccHHHHHHHHccccEEEcccccccccccccccccccEEEEEEccccccccccHHHHHccccHHHHHHHHHHHHHHcccEEEccccccccccccHHHHHHHHHHHHHHHHHHccccc

cccccccccccccccccccccccccccHHHHcccHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHcccccccccccccccccccccccEEEEEcccHHHcHHHHHHHHcccccccccHHHcccccccccccccccccccccccHHHccHHHHHHHHHHHHcccccccccHHHccEEEEEccccccHHHHcccccccHHHHHHHHHHHHHHHccHHHHHcccccEEEEEccccccccccccccccccccccccHcccEEEEEccccccccccEEccccccccccHHHHHHHHHHHccccccEEEEEccccccccccHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHcccEcccccccccccHHHHHHHHHcccEEEEEccccEEEcccccccccccEEEEEcHHHHccccccHHHHHHcccHHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccc

mlpysklpspdpppkkskfpeldqksslngliyptlslqsprSWLLLVILLLQVIFVLVLRSVSMsfstshvapqqshpeisasvprvsdqcelgkiyvydlpkalnEDLLQNChelnpwgsrcdmllndgfgrqasalngvvpenlvpawhwtDQFVLEIIFHRRILNHrcrtlepesaaafyiPFYVGLAVGKYlwsdssakARDMHCDLMLKwvqdqpywnrsdgwdhftamGRITwdfrrskdedwgsscIYKKAMRNITRLLIernpwdyfdvgvpyptgfhprsasdvtqwqdyvrsrnrsslycfagATRMVKNDFRSMLLSHcknesgscrvvdcegtrcmngTSAILETFLDSvfclqprgdsftrrsiFDCMVAGSIPVFFWKRSAYFQyawflpdepgsysvfidrnevrngTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAksreglgtikDAFDVAIDGVLRRIKEQQELGFKW

mlpysklpspdpppkkSKFPELDQKSSLNGLIYPTLSLQSPRSWLLLVILLLQVIFVLVLRSVSMSFSTshvapqqshpeisasvprvsDQCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWdfrrskdedwgsscIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLesysqeevkrmRDKVIDYIPKFIyaksreglgtiKDAFDVAIDGVLRRIKeqqelgfkw

MLpysklpspdpppkkskfpELDQKSSLNGLIYPTLSLQSPRSWlllvilllqvifvlvlRSVSMSFSTSHVAPQQSHPEISASVPRVSDQCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRIKEQQELGFKW

****************************NGLIYPTLSLQSPRSWLLLVILLLQVIFVLVLRSVSMS**********************SDQCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRI**********

*************************************LQSPRSWLLLVILLLQVIFVLVLRSVSM***************************ELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRIKE********

********************ELDQKSSLNGLIYPTLSLQSPRSWLLLVILLLQVIFVLVLRSVSMS**********************SDQCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRIKEQQELGFKW

*************************SSLNGLIYPTLSLQSPRSWLLLVILLLQVIFVLVLRSVSM*************************QCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRIKEQQELGFKW

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		490	2.2.26 [Sep-21-2011]
Q8H038		588	Xyloglucan galactosyltran	no	no	0.793	0.661	0.417	5e-88
Q7XJ98		619	Xyloglucan galactosyltran	no	no	0.8	0.633	0.403	5e-86
Q9LFP3		480	Probable glycosyltransfer	no	no	0.522	0.533	0.247	3e-08
Q9FFN2		518	Probable glycosyltransfer	no	no	0.491	0.465	0.257	1e-07
Q9SSE8		470	Probable glycosyltransfer	no	no	0.451	0.470	0.237	3e-07
Q6NMM8		469	Probable glucuronoxylan g	no	no	0.206	0.215	0.301	3e-06
Q940Q8		415	Probable beta-1,4-xylosyl	no	no	0.777	0.918	0.208	4e-06
Q8S1X7		417	Probable glucuronosyltran	no	no	0.236	0.278	0.305	1e-05
Q94AA9		500	Xylogalacturonan beta-1,3	no	no	0.516	0.506	0.252	1e-05
Q6H4N0		434	Probable glucuronosyltran	no	no	0.718	0.811	0.230	1e-05

>sp\|Q8H038\|KATAM_ORYSJ Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1	Back alignment and function desciption

 Score =  325 bits (833), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 166/398 (41%), Positives = 238/398 (59%), Gaps = 9/398 (2%)

Query: 89  SDQCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLV 148
           SD C    IYV++LP   N+D+L+ C  L+ W + C  + N+G G       GV      
Sbjct: 125 SDPCGGRYIYVHELPPRFNDDMLRECERLSLWTNMCKFMSNEGLGPPLGNEEGVFSNT-- 182

Query: 149 PAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDM 208
             W+ T+QF++++IF  R+  + C T +   AAA ++PFY G  V +YLW   +   RD 
Sbjct: 183 -GWYATNQFMVDVIFRNRMKQYECLTKDSSIAAAVFVPFYAGFDVARYLWG-HNISTRDA 240

Query: 209 HCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDE--DWGSSCIYKKAMRNITRL 266
               ++ W++ +P WN   G DHF   GRI WDFRR  DE  DWG+  ++  A +N++ L
Sbjct: 241 ASLDLIDWLRKRPEWNVMGGRDHFLVGGRIAWDFRRLTDEESDWGNKLLFMPAAKNMSML 300

Query: 267 LIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVK-NDFRS 325
           ++E +PW+  D  +PYPT FHP   +DV  WQD +RS  R  L+ FAGA R       RS
Sbjct: 301 VVESSPWNANDFAIPYPTYFHPAKDADVLLWQDRMRSLERPWLFSFAGAPRPDDPKSIRS 360

Query: 326 MLLSHCKNESGSCRVVDCE-GTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVA 384
            L+  C+  S  C++++C+ G    +  SAI+  F +S+FCLQP+GDS+TRRS FD M+A
Sbjct: 361 QLIDQCRT-SSVCKLLECDLGESKCHSPSAIMNMFQNSLFCLQPQGDSYTRRSAFDSMLA 419

Query: 385 GSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRD 444
           G IPVFF   SAY QY W LP     YSVFI  + VR G  SI+  L+S   + VK+MR+
Sbjct: 420 GCIPVFFHPGSAYVQYTWHLPKNYTRYSVFIPEDGVRKGNVSIEDRLKSIHPDMVKKMRE 479

Query: 445 KVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRIKE 482
           +VI  IP+ IYA  R  L T+KDAFDV+++ ++ ++ +
Sbjct: 480 EVISLIPRVIYADPRSKLETLKDAFDVSVEAIINKVTQ 517

Involved in the attachment of the Gal residue on the third xylosyl unit within the XXXG core structure of xyloglucan, the principal glycan that interlaces the cellulose microfibrils in plant cell wall. Interacts with actin and is required for the proper endomembrane organization and for the cell elongation.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q7XJ98\|KATAM_ARATH Xyloglucan galactosyltransferase KATAMARI1 OS=Arabidopsis thaliana GN=KAM1 PE=1 SV=1	Back alignment and function description

>sp\|Q9LFP3\|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2	Back alignment and function description

>sp\|Q9FFN2\|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2	Back alignment and function description

>sp\|Q9SSE8\|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1	Back alignment and function description

>sp\|Q6NMM8\|F8H_ARATH Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana GN=F8H PE=2 SV=1	Back alignment and function description

>sp\|Q940Q8\|IX10L_ARATH Probable beta-1,4-xylosyltransferase IRX10L OS=Arabidopsis thaliana GN=IRX10L PE=2 SV=1	Back alignment and function description

>sp\|Q8S1X7\|GT15_ORYSJ Probable glucuronosyltransferase Os01g0926700 OS=Oryza sativa subsp. japonica GN=Os01g0926700 PE=2 SV=1	Back alignment and function description

>sp\|Q94AA9\|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2	Back alignment and function description

>sp\|Q6H4N0\|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		490
255539657		497	Xyloglucan galactosyltransferase KATAMAR	0.995	0.981	0.659	0.0
224122556		512	predicted protein [Populus trichocarpa]	0.991	0.949	0.626	0.0
225455598		489	PREDICTED: xyloglucan galactosyltransfer	0.985	0.987	0.669	0.0
224134569		516	predicted protein [Populus trichocarpa]	0.995	0.945	0.618	0.0
356574438		495	PREDICTED: xyloglucan galactosyltransfer	0.987	0.977	0.606	0.0
357444231		877	DEAD-box ATP-dependent RNA helicase [Med	0.977	0.546	0.608	0.0
297797191		513	exostosin family protein [Arabidopsis ly	0.991	0.947	0.610	1e-177
8809635		549	unnamed protein product [Arabidopsis tha	0.983	0.877	0.613	1e-176
15241759		517	glycosyltransferase 18 [Arabidopsis thal	0.991	0.940	0.611	1e-176
449451928		1247	PREDICTED: uncharacterized protein LOC10	0.977	0.384	0.616	1e-175

>gi\|255539657\|ref\|XP_002510893.1\| Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] gi\|223550008\|gb\|EEF51495.1\| Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/499 (65%), Positives = 397/499 (79%), Gaps = 11/499 (2%)

Query: 1   MLPYSKLPSPDP-------PPKKSKFPELDQKSSLNGLIYPTLSLQSPRSWLLLVILLLQ 53
           ML  S+  SP+P       PP  +  P  +  +SL+ L+  +   QS R+WLLL +L  Q
Sbjct: 1   MLSLSRPSSPEPYIRKPKSPPDDAVLPRKNSFTSLSSLLSHSYLNQS-RTWLLLSVLSFQ 59

Query: 54  VIFVLVLRSVSMSFSTS-HVAPQQSHPEISASVPRVSDQCELGKIYVYDLPKALNEDLLQ 112
           +I +L  RS+ +SF+   H  P         + P   D+C LG+++VYDLP   N +L+Q
Sbjct: 60  LIILLAFRSLPLSFTHHRHHFPSPYTAHHFITNPTADDECRLGRVFVYDLPSKFNAELVQ 119

Query: 113 NCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRC 172
           NC ELNPW SRCD L NDGFG++A+ L+G+VPENLVPAW+WTDQFV EIIFH RILNH+C
Sbjct: 120 NCDELNPWSSRCDALTNDGFGQKATGLSGIVPENLVPAWYWTDQFVSEIIFHNRILNHKC 179

Query: 173 RTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHF 232
           RT EP +A AFYIPFY GLAVGK+LW + +AK RD HC++ML WV+DQPY+ RS+GW+HF
Sbjct: 180 RTTEPSNATAFYIPFYAGLAVGKFLWFNYTAKDRDRHCEIMLDWVRDQPYYKRSNGWNHF 239

Query: 233 TAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSAS 292
             MGRI+WDFRRSK+EDWGSSCIY   MRNITRLLIERNPWDYFDVGVPYPTGFHPRS +
Sbjct: 240 LTMGRISWDFRRSKEEDWGSSCIYMPGMRNITRLLIERNPWDYFDVGVPYPTGFHPRSDN 299

Query: 293 DVTQWQDYVRSRNRSSLYCFAGATR-MVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNG 351
           D+ QWQD+VR+RNR+SL+CFAGA R  +KNDFR +LL HC NES SCRVVDC G+RC NG
Sbjct: 300 DILQWQDFVRTRNRNSLFCFAGAKRGAIKNDFRGLLLRHCYNESDSCRVVDCSGSRCSNG 359

Query: 352 TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSY 411
           TSAIL+TFLDS FCLQPRGDSFTRRSIFDCM+AGSIPV FWKR+AY+QY WFLP EP SY
Sbjct: 360 TSAILKTFLDSDFCLQPRGDSFTRRSIFDCMLAGSIPVLFWKRTAYYQYEWFLPGEPDSY 419

Query: 412 SVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDV 471
           SVFI R+EV+NGT S++ VLESYS+EEV++MR+KVI+YIPKF+YA+  EGLG+IKDAFDV
Sbjct: 420 SVFIHRDEVKNGT-SVRKVLESYSKEEVRKMREKVIEYIPKFVYARPNEGLGSIKDAFDV 478

Query: 472 AIDGVLRRIKEQQELGFKW 490
           AIDGVLRR KEQ+E  +KW
Sbjct: 479 AIDGVLRRFKEQEEWDYKW 497

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224122556\|ref\|XP_002318866.1\| predicted protein [Populus trichocarpa] gi\|222859539\|gb\|EEE97086.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225455598\|ref\|XP_002270309.1\| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224134569\|ref\|XP_002321855.1\| predicted protein [Populus trichocarpa] gi\|222868851\|gb\|EEF05982.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356574438\|ref\|XP_003555354.1\| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Glycine max]	Back alignment and taxonomy information

>gi\|357444231\|ref\|XP_003592393.1\| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi\|355481441\|gb\|AES62644.1\| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297797191\|ref\|XP_002866480.1\| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi\|297312315\|gb\|EFH42739.1\| exostosin family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|8809635\|dbj\|BAA97186.1\| unnamed protein product [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|15241759\|ref\|NP_201028.1\| glycosyltransferase 18 [Arabidopsis thaliana] gi\|332010199\|gb\|AED97582.1\| glycosyltransferase 18 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|449451928\|ref\|XP_004143712.1\| PREDICTED: uncharacterized protein LOC101209696 [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		490
TAIR\|locus:2167933		517	GT18 "AT5G62220" [Arabidopsis	0.867	0.822	0.673	1.1e-167
TAIR\|locus:2039002		619	MUR3 "AT2G20370" [Arabidopsis	0.797	0.631	0.407	4.5e-82
TAIR\|locus:2066091		720	AT2G29040 "AT2G29040" [Arabido	0.789	0.537	0.406	2.5e-81
TAIR\|locus:2129281		521	AT4G13990 "AT4G13990" [Arabido	0.806	0.758	0.399	7.6e-80
TAIR\|locus:2046372		509	AT2G32750 "AT2G32750" [Arabido	0.793	0.764	0.391	1.4e-78
TAIR\|locus:2031346		664	RHS8 "AT1G63450" [Arabidopsis	0.773	0.570	0.385	2.1e-77
TAIR\|locus:2155110		561	AT5G41250 "AT5G41250" [Arabido	0.769	0.672	0.392	6.3e-76
TAIR\|locus:2201297		455	AT1G68470 "AT1G68470" [Arabido	0.787	0.848	0.396	4.5e-75
TAIR\|locus:2045527		479	AT2G31990 "AT2G31990" [Arabido	0.802	0.820	0.392	1.2e-72
TAIR\|locus:2046387		468	GT13 "AT2G32740" [Arabidopsis	0.793	0.831	0.369	8.9e-70

TAIR\|locus:2167933 GT18 "AT5G62220" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1631 (579.2 bits), Expect = 1.1e-167, P = 1.1e-167
 Identities = 289/429 (67%), Positives = 348/429 (81%)

Query:    63 VSMSFSTSHVAPQQSHPEISASVPRVSDQCELGKIYVYDLPKALNEDLLQNCHELNPWGS 122
             V+ + +T+ ++   S+P +S+S     ++C+ G+++VYD+PK  NE +LQ C  LNPW S
Sbjct:    91 VTTTVTTTVISAASSNPPLSSSSS--DERCDSGRVFVYDMPKIFNEVILQQCDNLNPWSS 148

Query:   123 RCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRRILNHRCRTLEPESAAA 182
             RCD L NDGFG++A++L+ V+P++LV +W WTDQFV EIIFH RILNHRCRTL+PESA A
Sbjct:   149 RCDALSNDGFGQEATSLSNVIPKDLVQSWFWTDQFVTEIIFHNRILNHRCRTLDPESATA 208

Query:   183 FYIPFYVGLAVGKYLWSDSSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWDF 242
             FYIPFY GLAVG+YLWS+ +A  RD HC +M +WV++QPYWNRS+GWDHF  MGRITWDF
Sbjct:   209 FYIPFYAGLAVGQYLWSNYAAADRDRHCKMMTQWVKNQPYWNRSNGWDHFITMGRITWDF 268

Query:   243 RRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVR 302
             RRSKDEDWGS+CIY   MRNITRLLIERN WD+FDVGVPYPTGFHPRS SDV  WQD+VR
Sbjct:   269 RRSKDEDWGSNCIYIPGMRNITRLLIERNSWDHFDVGVPYPTGFHPRSDSDVVNWQDFVR 328

Query:   303 SRNRSSLYCFAGATRM-VKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLD 361
             +R R +L+CFAGA R  + NDFR +LL HC+   G CR VDC   +C NG+SAILETFL 
Sbjct:   329 NRRRETLFCFAGAPRAGIVNDFRGLLLRHCEESRGKCRTVDCTVGKCSNGSSAILETFLG 388

Query:   362 SVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVR 421
             S FCLQPRGDSFTRRSIFDCM+AGSIPVFFW+RSAY QY WFLPD+P SYSVFIDRNEV 
Sbjct:   389 SDFCLQPRGDSFTRRSIFDCMLAGSIPVFFWRRSAYMQYQWFLPDKPDSYSVFIDRNEVT 448

Query:   422 NGTKSIKAVLESYSQEEVKRMRDKVIDYIPKFIYAKSREGLGTIKDAFDVAIDGVLRRIK 481
             NGT SIK VLE YS+E+V++MR++VID IP  +YAKS  GL T KDAFDVAIDGV RR K
Sbjct:   449 NGTTSIKEVLERYSKEDVRKMRERVIDLIPNLVYAKSPNGLETFKDAFDVAIDGVFRRFK 508

Query:   482 EQQELGFKW 490
             EQ++  +KW
Sbjct:   509 EQEKW-YKW 516

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0008378 "galactosyltransferase activity" evidence=IMP

GO:0009969 "xyloglucan biosynthetic process" evidence=IMP

GO:0006007 "glucose catabolic process" evidence=RCA

TAIR\|locus:2039002 MUR3 "AT2G20370" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2066091 AT2G29040 "AT2G29040" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2129281 AT4G13990 "AT4G13990" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046372 AT2G32750 "AT2G32750" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2031346 RHS8 "AT1G63450" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2155110 AT5G41250 "AT5G41250" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2201297 AT1G68470 "AT1G68470" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045527 AT2G31990 "AT2G31990" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046387 GT13 "AT2G32740" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_XII001237	hypothetical protein (512 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		490
pfam03016		292	pfam03016, Exostosin, Exostosin family	3e-54

>gnl\|CDD\|217320 pfam03016, Exostosin, Exostosin family	Back alignment and domain information

 Score =  183 bits (467), Expect = 3e-54
 Identities = 104/360 (28%), Positives = 144/360 (40%), Gaps = 84/360 (23%)

Query: 91  QCELGKIYVYDLPKALNEDLLQNCHELNPWGSRCDMLLNDGFGRQASALNGVVPENLVPA 150
            C+  K+YVYDLP+  N  LL++      W                              
Sbjct: 1   SCKGLKVYVYDLPRRFN--LLEDVLPETSWYL---------------------------- 30

Query: 151 WHWTDQFVLEIIFHRRILNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSDSSAKARDMHC 210
              T Q+  E I H+ ILN RCRTL+P+ A  F++PFY  L+VG      ++A  RD+  
Sbjct: 31  ---THQYAAESILHKSILNSRCRTLDPDEADLFFVPFYTSLSVG------TNAVERDLLP 81

Query: 211 DLMLKWVQDQPYWNRSDGWDHFTAMGRITWDFRRSKDEDWGSSCIYKKAMRNITRLLI-- 268
             +++W++  PYWNRS G DH                   GS+     A+ N T L +  
Sbjct: 82  SELVEWLESLPYWNRSGGRDHIIVNSHP----------FGGSAFDRLPALNNNTILAVLA 131

Query: 269 -----ERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATR-----M 318
                E      FDV  P P  FHP S  D+           R +L  FAG  R      
Sbjct: 132 GGGFSEDQFRPGFDV--PLPAYFHPNSVDDLESDGM--PPSKRKTLLFFAGGPRPAGKGA 187

Query: 319 VKNDFRSMLLSHCKNESGSCRVVDCEGTRCMNGTSAILETFLDSVFCLQPRGDSFTRRSI 378
           + N  R +L+  CKN         CEG +        +E    S FCL P GD+ T   +
Sbjct: 188 LANAIRDLLIEECKNSPDFQ----CEGNQSCGNPENYMELLRSSRFCLVPPGDTPTSPRL 243

Query: 379 FDCMVAGSIPVFFWKRSAYFQYAWFLPDEP----GSYSVFIDRNEVRNGTKSIKAVLESY 434
           FD + AG IPV            W LP E       +SV +  N++     S+  +L + 
Sbjct: 244 FDALRAGCIPVI-------ISDGWELPFEDVIDWSKFSVRVPENDI----PSLPEILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		490
KOG1021		464	consensus Acetylglucosaminyltransferase EXT1/exost	100.0
PF03016		302	Exostosin: Exostosin family; InterPro: IPR004263 H	100.0
KOG2264		907	consensus Exostosin EXT1L [Signal transduction mec	99.91
KOG1022		691	consensus Acetylglucosaminyltransferase EXT2/exost	99.16
cd03814		364	GT1_like_2 This family is most closely related to	95.7
cd03794		394	GT1_wbuB_like This family is most closely related	95.15
PF00852		349	Glyco_transf_10: Glycosyltransferase family 10 (fu	94.22
cd03808		359	GT1_cap1E_like This family is most closely related	93.92
cd03807		365	GT1_WbnK_like This family is most closely related	93.65
PF00534		172	Glycos_transf_1: Glycosyl transferases group 1; In	93.36
cd03820		348	GT1_amsD_like This family is most closely related	93.18
cd03822		366	GT1_ecORF704_like This family is most closely rela	92.89
cd03809		365	GT1_mtfB_like This family is most closely related	92.87
cd03801		374	GT1_YqgM_like This family is most closely related	92.78
TIGR03449		405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	92.56
PLN02871		465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	92.51
cd03800		398	GT1_Sucrose_synthase This family is most closely r	92.47
cd03798		377	GT1_wlbH_like This family is most closely related	91.82
PRK09814		333	beta-1,6-galactofuranosyltransferase; Provisional	91.77
cd04962		371	GT1_like_5 This family is most closely related to	89.41
cd03806		419	GT1_ALG11_like This family is most closely related	88.92
cd03819		355	GT1_WavL_like This family is most closely related	88.8
cd04951		360	GT1_WbdM_like This family is most closely related	88.51
cd03823		359	GT1_ExpE7_like This family is most closely related	88.04
TIGR03088		374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	88.03
cd03818		396	GT1_ExpC_like This family is most closely related	88.0
cd03821		375	GT1_Bme6_like This family is most closely related	87.97
TIGR02149		388	glgA_Coryne glycogen synthase, Corynebacterium fam	86.74
TIGR02095		473	glgA glycogen/starch synthases, ADP-glucose type.	86.58
PRK15427		406	colanic acid biosynthesis glycosyltransferase WcaL	86.24
PRK15484		380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	86.06
cd05844		367	GT1_like_7 Glycosyltransferases catalyze the trans	85.78
PRK00654		466	glgA glycogen synthase; Provisional	83.9
PRK14098		489	glycogen synthase; Provisional	83.72
cd04949		372	GT1_gtfA_like This family is most closely related	83.6
KOG2619		372	consensus Fucosyltransferase [Carbohydrate transpo	83.29
cd03804		351	GT1_wbaZ_like This family is most closely related	82.42
cd03793		590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	82.14
cd03802		335	GT1_AviGT4_like This family is most closely relate	82.01
PLN02949		463	transferase, transferring glycosyl groups	81.03

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]	Back alignment and domain information

Probab=100.00  E-value=3e-67  Score=560.67  Aligned_cols=380  Identities=34%  Similarity=0.542  Sum_probs=327.8

Q ss_pred             CCCCceEEEeCCchhhhHHHHhhcccCC-CCCC---cCcccccCCCCCcccccCCCCCCCCCCcccccCchhhhHHHHHH
Q 011220           91 QCELGKIYVYDLPKALNEDLLQNCHELN-PWGS---RCDMLLNDGFGRQASALNGVVPENLVPAWHWTDQFVLEIIFHRR  166 (490)
Q Consensus        91 ~c~~~~VYvYdLP~~Fn~~ll~~c~~~~-~w~~---~C~~~~n~G~g~~~~~~~~~~~~~~~~~w~~t~qf~~E~ifh~r  166 (490)
                      .|.+..||||++|+.||.++++.|.... .|..   +|.+..|+++|+......+..+....++|+.|+||++|.+||++
T Consensus        69 ~~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~  148 (464)
T KOG1021|consen   69 ICAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNR  148 (464)
T ss_pred             cccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHH
Confidence            4999999999999999999999998875 5555   99998889998876655553344556899999999999999999


Q ss_pred             h--ccCccccCCCCCceEEEEeccccccccccccCC---CChHHHhHHHHHHHHHHhcCcccccCCCCceEEeecccccc
Q 011220          167 I--LNHRCRTLEPESAAAFYIPFYVGLAVGKYLWSD---SSAKARDMHCDLMLKWVQDQPYWNRSDGWDHFTAMGRITWD  241 (490)
Q Consensus       167 L--l~s~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~---~~~~~r~~~~~~l~~~L~~~PyWnRsgGrDHf~v~~~~~wd  241 (490)
                      +  ..++|||.||+|||+||||||++++..+++..+   .....++.++..++.|+++||||||++|+|||||++|+.|+
T Consensus       149 ~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~  228 (464)
T KOG1021|consen  149 MLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGD  228 (464)
T ss_pred             HhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchh
Confidence            9  578999999999999999999999997764443   23345777889999999999999999999999999999999


Q ss_pred             ccCCCCCCCCccccchHHHhhHHHhhhhcCCCCCceeeccCCCccCCCCCCCccccccccCCCCCceeeeecccccCCch
Q 011220          242 FRRSKDEDWGSSCIYKKAMRNITRLLIERNPWDYFDVGVPYPTGFHPRSASDVTQWQDYVRSRNRSSLYCFAGATRMVKN  321 (490)
Q Consensus       242 frr~~~~dwG~~~~~~p~~~n~~~l~ie~~~w~~~Dv~iPy~t~fhP~~~~~~~~w~~~~~~~~R~~L~~FaG~~~~~~~  321 (490)
                      +++.  .+||+.....+++.|.+.++.+..+|. +|+++||++.+||....+. .|+..+...+|++|++|+|+.  .++
T Consensus       229 ~~~~--~~~~~~~~~i~~~~n~a~ls~~~~~~~-~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~--~~~  302 (464)
T KOG1021|consen  229 FRRR--SDWGASISLIPEFCNGALLSLEFFPWN-KDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAP--AGG  302 (464)
T ss_pred             eeec--cchhhHHHHHHhhCCcceeecccccCC-CcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEeccc--cCC
Confidence            8764  568887777788888878888777776 8999999999999998877 888888889999999999994  234


Q ss_pred             hHHHHHHhhhhcCCCCeEEEecCCCccc-CChhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccc
Q 011220          322 DFRSMLLSHCKNESGSCRVVDCEGTRCM-NGTSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQY  400 (490)
Q Consensus       322 ~iR~~L~~~~~~~~~~~~~~~c~~~~c~-~~~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y  400 (490)
                      .||++|+++|++.++.|..+.|..+.++ .+..+|++.|++|+|||||+||+++|+|+||||++|||||||+|+   .||
T Consensus       303 ~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~---~~l  379 (464)
T KOG1021|consen  303 QIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG---IQL  379 (464)
T ss_pred             cHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC---ccc
Confidence            9999999999985556778888766443 456799999999999999999999999999999999999999996   677


Q ss_pred             cccCCCCCCceEEEEeccccccCcccHHHHHhcCCHHHHHHHHHHHhh-hcceeEEecCCCCCCchhhHHHHHHHHHHHH
Q 011220          401 AWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYSQEEVKRMRDKVID-YIPKFIYAKSREGLGTIKDAFDVAIDGVLRR  479 (490)
Q Consensus       401 ~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~~Is~~~i~~Mr~~l~~-v~~~f~Y~~p~~~~~~~~DAfd~~l~~l~~R  479 (490)
                      +|+.+-||++|||+|++++|+++   |.++|.+|+++++.+||+++++ +.++|.+..+  .....+|||++++++|++|
T Consensus       380 pf~~~~d~~~fSV~v~~~~v~~~---~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~--~~~~~~da~~~~~~~v~~r  454 (464)
T KOG1021|consen  380 PFGDVLDWTEFSVFVPEKDVPEL---IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPP--GPPKRGDAFHMILHSLWRR  454 (464)
T ss_pred             CcCCCccceEEEEEEEHHHhhhH---HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCC--CCCCcchhHHHHHhhhhhc
Confidence            78888899999999999999944   4999999999999999999995 7888888774  2345599999999999999


Q ss_pred             HHhhh
Q 011220          480 IKEQQ  484 (490)
Q Consensus       480 i~~~~  484 (490)
                      +.+.+
T Consensus       455 ~~~~~  459 (464)
T KOG1021|consen  455 LHKLR  459 (464)
T ss_pred             ccccc
Confidence            87765

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []	Back alignment and domain information

>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]	Back alignment and domain information

>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]	Back alignment and domain information

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase	Back alignment and domain information

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	Back alignment and domain information

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional	Back alignment and domain information

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli	Back alignment and domain information

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family	Back alignment and domain information

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type	Back alignment and domain information

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional	Back alignment and domain information

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional	Back alignment and domain information

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>PRK00654 glgA glycogen synthase; Provisional	Back alignment and domain information

>PRK14098 glycogen synthase; Provisional	Back alignment and domain information

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding	Back alignment and domain information

>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]	Back alignment and domain information

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis	Back alignment and domain information

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN02949 transferase, transferring glycosyl groups	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		490
3qhp_A		166	Type 1 capsular polysaccharide biosynthesis prote	96.66
2bfw_A		200	GLGA glycogen synthase; glycosyltransferase family	94.24
2gek_A		406	Phosphatidylinositol mannosyltransferase (PIMA); G	93.67
3c48_A		438	Predicted glycosyltransferases; retaining glycosyl	92.22
3okp_A		394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	92.08
2nzw_A		371	Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H	92.07
2jjm_A		394	Glycosyl transferase, group 1 family protein; anth	92.0
2iw1_A		374	Lipopolysaccharide core biosynthesis protein RFAG;	90.1
1f0k_A		364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	89.54
3rhz_A		339	GTF3, nucleotide sugar synthetase-like protein; gl	89.2
2f9f_A		177	First mannosyl transferase (WBAZ-1); alpha-beta pr	88.65
1rzu_A		485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	85.92
2qzs_A		485	Glycogen synthase; glycosyl-transferase, GT-B fold	83.8
2r60_A		499	Glycosyl transferase, group 1; rossmann-fold; 1.80	83.78
3fro_A		439	GLGA glycogen synthase; glycosyltransferase family	83.77
3oy2_A		413	Glycosyltransferase B736L; rossmann fold, GDP-mann	83.06
2x6q_A		416	Trehalose-synthase TRET; biosynthetic protein; 2.2	80.46

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}	Back alignment and structure

Probab=96.66  E-value=0.0033  Score=55.27  Aligned_cols=96  Identities=10%  Similarity=0.205  Sum_probs=61.3

Q ss_pred             hhhHHHhhccCeEEeccCCCCCCchhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHH
Q 011220          352 TSAILETFLDSVFCLQPRGDSFTRRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVL  431 (490)
Q Consensus       352 ~~~y~~~m~~S~FCL~P~Gds~ssrrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL  431 (490)
                      ..++.+.|+.+..++.|.-.......+.|||.+||||||..++.....   ++--+ ...  .++..+..    ++.+.|
T Consensus        65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~~~-~~~--~~~~~~~~----~l~~~i  134 (166)
T 3qhp_A           65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFALD-ERS--LFEPNNAK----DLSAKI  134 (166)
T ss_dssp             HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGCSS-GGG--EECTTCHH----HHHHHH
T ss_pred             HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhccC-Cce--EEcCCCHH----HHHHHH
Confidence            467899999999999998555555679999999999999954321111   11112 233  44544444    344444


Q ss_pred             hcC--CHHHHHHHHHHHhhhcceeEEec
Q 011220          432 ESY--SQEEVKRMRDKVIDYIPKFIYAK  457 (490)
Q Consensus       432 ~~I--s~~~i~~Mr~~l~~v~~~f~Y~~  457 (490)
                      ..+  .++...+|.++..+...+|.|..
T Consensus       135 ~~l~~~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A          135 DWWLENKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence            333  67788899888877667776654

PyMOL of 3qhp

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8	Back alignment and structure

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*	Back alignment and structure

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*	Back alignment and structure

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*	Back alignment and structure

>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*	Back alignment and structure

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*	Back alignment and structure

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*	Back alignment and structure

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*	Back alignment and structure

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*	Back alignment and structure

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8	Back alignment and structure

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A	Back alignment and structure

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A	Back alignment and structure

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*	Back alignment and structure

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*	Back alignment and structure

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*	Back alignment and structure

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		490
d2nzwa1		349	Alpha1,3-fucosyltransferase FucT {Helicobacter pyl	96.09
d2bisa1		437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.57
d2iw1a1		370	Lipopolysaccharide core biosynthesis protein RfaG	84.07
d2f9fa1		166	First mannosyl transferase WbaZ {Archaeoglobus ful	81.23

>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.09  E-value=0.016  Score=56.78  Aligned_cols=124  Identities=15%  Similarity=0.201  Sum_probs=75.9

Q ss_pred             CCCCceeeeec-ccccCCchhHHHHHHhhhhcCCCCeEEEecCCCcccC----ChhhHHHhhccCeEEeccC---CCCCC
Q 011220          303 SRNRSSLYCFA-GATRMVKNDFRSMLLSHCKNESGSCRVVDCEGTRCMN----GTSAILETFLDSVFCLQPR---GDSFT  374 (490)
Q Consensus       303 ~~~R~~L~~Fa-G~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~~~c~~----~~~~y~~~m~~S~FCL~P~---Gds~s  374 (490)
                      ...|+-+.+|. +...   ...|..+++++..-.    .+++.| .|.+    ...+-.+.+++.+|+||..   ..+..
T Consensus       176 ~~~K~kFcs~v~Sn~~---~~~R~~~~~~L~k~~----~Vd~~G-~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~Yv  247 (349)
T d2nzwa1         176 DPLKRGFASFVASNPN---APIRNAFYDALNSIE----PVTGGG-SVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYV  247 (349)
T ss_dssp             CTTSSEEEEECCSCCC---CHHHHHHHHHHTTTS----CCEECS-STTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCC
T ss_pred             ccccCceEEEEEcCCC---CchHHHHHHHHhccC----eecccC-ccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCc
Confidence            34556666554 4332   368999988887553    234433 3322    2235678899999999874   34556


Q ss_pred             chhHHHHHhhCceeEEeecCcccccccccCCCCCCceEEEEeccccccCcccHHHHHhcCC--HHHHHHHHH
Q 011220          375 RRSIFDCMVAGSIPVFFWKRSAYFQYAWFLPDEPGSYSVFIDRNEVRNGTKSIKAVLESYS--QEEVKRMRD  444 (490)
Q Consensus       375 srrl~DAi~aGCIPViisd~~~y~~y~~~LPfdw~~fSV~I~e~dv~~g~~~l~~iL~~Is--~~~i~~Mr~  444 (490)
                      +-.++||+++|||||..++.. ..+   .+|  -.+|   |..+|..+ ..++.+.|+.|+  ++.+.+|-.
T Consensus       248 TEKi~da~~~g~iPIy~G~~~-i~~---~f~--~~sf---I~~~df~s-~~el~~~i~~l~~n~~~Y~~~~~  309 (349)
T d2nzwa1         248 TEKIIDAYFSHTIPIYWGSPS-VAK---DFN--PKSF---VNVHDFKN-FDEAIDYIKYLHTHKNAYLDMLY  309 (349)
T ss_dssp             CTHHHHHHHTTCEEEEESCTT-GGG---TSC--GGGS---EEGGGSSS-HHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             chHHHHHHhCCeEEEEECCCc-HHH---cCC--CccE---EEhhhCCC-HHHHHHHHHHHhcCHHHHHHHHh
Confidence            777999999999999999753 222   233  2344   45444431 115666776664  555666553

PyMOL of d2nzwa1

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure