Citrus Sinensis ID: 011229

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
MVVGFVTPENEIFEDEKKTRIGSLKKVAISASNKFRHSLKRGRRSSKVMSVVEIEDVHDAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWKDPDILKMVQNGDHKCKNMGGAQKPEEKTISEDETISFKLFTGVMAFVMGIVTMIRVTKNMPKKLTDATIYSNPGYNVDEVDRHKSTPGIYGAEYIAVMKRMAELEDAVTILSAKPAAMLAEKEEMLNAAVSRVDALEQELMSTRRALEDSLARQEELLAFIDKKKKKKKLFNW
cccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccEEEEEEcccccHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHcccccccEEEEEEccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHccccccccccEEEEEccccHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccHHHHHHcccEEEEEEEEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
cEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHcccccHHHHHHHcccEEEEEcccccEEEEEcHHHccHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccEEEEEEcccccHHHccHHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHccHHHHccEEEcccccHHHHcccccccccEHHHcccEcccHHHcccccccccccccHHEEEHHcccccccccccccccccEEEccccccccEEccccccEEEcEEEEEcccccccccccccccccccccccccccccccccccEHHHHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mvvgfvtpeneifedekKTRIGSLKKVAISASNKFRHSlkrgrrsskvMSVVEIEDVHDAEEIKAVDALRQALILEellpsrhdDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKefgtddimqDFEFKELSQvlecyphghhgvdkegqpvyierlglvdatkLMQVTNMERYLNYHVREFertfdikfpacsiaakkhidqsttildvQGVGLKSFNKAARELITQIQkidgdnypetLNRMFIINAGSGFRMLWNTIKsfldpkttaKIHVLGNKYQSKLLEIIdaselpeflggsctcadqggcmrsdkgpwkdpdilkmvqngdhkcknmggaqkpeektisedetiSFKLFTGVMAFVMGIVTMIRVTknmpkkltdatiysnpgynvdevdrhkstpgiygAEYIAVMKRMAELEDAVTILSAKPAAMLAEKEEMLNAAVSRVDALEQELMSTRRALEDSLARQEELLAFIDKKKKKKKLFNW
mvvgfvtpeneifedekktrigslkkvaisasnkfrhslkrgrrsskvmsvVEIEdvhdaeeiKAVDALRQALILEEllpsrhddYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECYPHGhhgvdkegqpvYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQiqkidgdnypETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWKDPDILKMVQNGDHKCKNMggaqkpeektiseDETISFKLFTGVMAFVMGIVTMIRVTKNMPKKLTDatiysnpgynvdevdrhkstPGIYGAEYIAVMKRMAELEDAVTILSAKPAAMLAEKEEMLNAAVSRVDALEQELMSTRRALEDSLARQEELLafidkkkkkkklfnw
MVVGFVTPENEIFEDEKKTRIGSLKKVAISASNKFRHSLKRGRRSSKVMSVVEIEDVHDAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWKDPDILKMVQNGDHKCKNMGGAQKPEEKTISEDETISFKLFTGVMAFVMGIVTMIRVTKNMPKKLTDATIYSNPGYNVDEVDRHKSTPGIYGAEYIAVMKRMAELEDAVTILSAKPAAMLAEKEEMLNAAVSRVDALEQELMSTRRALEDSLARQEELLAFIDkkkkkkkLFNW
*************************************************SVVEIEDVHDAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMR****************************************TISFKLFTGVMAFVMGIVTMIRVTKNMPKKLTDATIYSNPGYNVDEVDRHKSTPGIYGAEYIAVMKRMAELEDAVTILSAKPA*********************************************************
***************************************************************KAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWKDPDILKMVQNG******************SEDETISFKLFTGVMAFVMGIVTMIR****************************************AVMKR**EL*********************LNAAVSRVDALEQELMSTRRALEDSLARQEELLAFIDKKKKKKKLFNW
MVVGFVTPENEIFEDEKKTRIGSLKKVAISASNK**************MSVVEIEDVHDAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWKDPDILKMVQNGDHKCKN************SEDETISFKLFTGVMAFVMGIVTMIRVTKNMPKKLTDATIYSNPGYNVDEVDRHKSTPGIYGAEYIAVMKRMAELEDAVTILSAKPAAMLAEKEEMLNAAVSRVDALEQELMSTRRALEDSLARQEELLAFIDKKK********
MVV*FVT**NEIFEDEKKTRIGSLKKVAISASNKFRHSLKRGRRSSKVMSVVEIEDVHDAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWKDPDILKMVQNGDHKCKNMGGAQKPEEKTISEDETISFKLFTGVMAFVMGIVTMIRVT***********************DRHKSTPGIYGAEYIAVMKRMAELEDAVTILSAKPAAMLAEKEEMLNAAVSRVDALEQELMSTRRALEDSLARQEELLAFIDKKKKKKK*FNW
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVVGFVTPENEIFEDEKKTRIGSLKKVAISASNKFRHSLKRGRRSSKVMSVVEIEDVHDAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWKDPDILKMVQNGDHKCKNMGGAQKPEEKTISEDETISFKLFTGVMAFVMGIVTMIRVTKNMPKKLTDATIYSNPGYNVDEVDRHKSTPGIYGAEYIAVMKRMAELEDAVTILSAKPAAMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKKKKKLFNW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query490 2.2.26 [Sep-21-2011]
Q10137286 Sec14 cytosolic factor OS yes no 0.508 0.870 0.425 1e-52
P53989302 SEC14 cytosolic factor OS yes no 0.479 0.778 0.407 1e-48
P45816492 SEC14 cytosolic factor OS yes no 0.483 0.481 0.406 1e-48
P24280304 SEC14 cytosolic factor OS yes no 0.526 0.848 0.393 1e-48
P24859301 SEC14 cytosolic factor OS yes no 0.528 0.860 0.385 1e-47
P46250301 SEC14 cytosolic factor OS N/A no 0.524 0.853 0.384 9e-46
Q75DK1308 SEC14 cytosolic factor OS yes no 0.553 0.879 0.372 3e-45
P33324310 CRAL-TRIO domain-containi no no 0.504 0.796 0.347 4e-40
Q16KN5646 Protein real-time OS=Aede N/A no 0.453 0.343 0.321 2e-26
Q7PWB1684 Protein real-time OS=Anop yes no 0.442 0.317 0.312 3e-26
>sp|Q10137|SEC14_SCHPO Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=4 SV=1 Back     alignment and function desciption
 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/254 (42%), Positives = 157/254 (61%), Gaps = 5/254 (1%)

Query: 65  AVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQ 124
            +D++R  L L++L  +   D   +LRFL+ARKF+++++ +M+    +WRKEFG DD+++
Sbjct: 31  TLDSMR--LELQKLGYTERLDDATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIK 88

Query: 125 DFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFER 184
           +F + E   V + YP  +H  D +G+PVY+E+LG +D  KL Q+T  ER +   V E+E 
Sbjct: 89  NFHYDEKEAVSKYYPQFYHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQNLVYEYEM 148

Query: 185 TFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRM 244
               +FPACS  A   I+ S TI+D++GVG+ S + +    I Q   I  D YPE + + 
Sbjct: 149 LALKRFPACSRKAGGLIETSCTIMDLKGVGITSIH-SVYSYIRQASSISQDYYPERMGKF 207

Query: 245 FIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCAD 304
           ++INA  GF   +N IK FLD  T  KIH+LG+ Y+S LLE I A  LP  LGG+C C  
Sbjct: 208 YVINAPWGFSSAFNLIKGFLDEATVKKIHILGSNYKSALLEQIPADNLPAKLGGNCQCP- 266

Query: 305 QGGCMRSDKGPWKD 318
            GGC  SD GPW +
Sbjct: 267 -GGCELSDAGPWHE 279
Has a direct role in controlling cell septation and in forespore membrane formation.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 Back     alignment and function description
>sp|P45816|SEC14_YARLI SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 Back     alignment and function description
>sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P46250|SEC14_CANAL SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 Back     alignment and function description
>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 Back     alignment and function description
>sp|Q16KN5|RETM_AEDAE Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1 Back     alignment and function description
>sp|Q7PWB1|RETM_ANOGA Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query490
224094859496 predicted protein [Populus trichocarpa] 0.946 0.935 0.748 0.0
255561028547 Sec14 cytosolic factor, putative [Ricinu 0.981 0.879 0.705 0.0
224134214479 predicted protein [Populus trichocarpa] 0.938 0.960 0.742 0.0
297798258543 hypothetical protein ARALYDRAFT_912720 [ 0.971 0.876 0.636 0.0
18419847543 protein SEC14-like 12 [Arabidopsis thali 0.971 0.876 0.636 0.0
297836544554 hypothetical protein ARALYDRAFT_900189 [ 0.938 0.830 0.645 0.0
15224125558 sec.4-like phosphatidylinositol transfer 0.938 0.824 0.641 0.0
4006913558 hypothetical protein [Arabidopsis thalia 0.961 0.844 0.639 0.0
449462258568 PREDICTED: uncharacterized protein LOC10 0.979 0.845 0.616 0.0
224105355535 predicted protein [Populus trichocarpa] 0.963 0.882 0.603 0.0
>gi|224094859|ref|XP_002310267.1| predicted protein [Populus trichocarpa] gi|222853170|gb|EEE90717.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/481 (74%), Positives = 412/481 (85%), Gaps = 17/481 (3%)

Query: 15  DEKKTRIGSLKKVAISASNKFRHSLKR-GRRSSKVMSVVEIEDVHDAEEIKAVDALRQAL 73
           DE+K RI SLKK AISASNKFRHSL R GRRSSKVMS VEIEDVHD EE+K VDA RQ L
Sbjct: 6   DERKKRIESLKKKAISASNKFRHSLTRKGRRSSKVMS-VEIEDVHDVEELKVVDAFRQVL 64

Query: 74  ILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQ 133
           ILEELLPS+HDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFG D ++++FEF+ELS+
Sbjct: 65  ILEELLPSKHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGADTVLEEFEFQELSE 124

Query: 134 VLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPAC 193
           VLE YP GHHGVDKEG+PVYIE+LG  D  KL+QVT+M+RY+ YHVREFERTFD KFPAC
Sbjct: 125 VLEHYPQGHHGVDKEGRPVYIEQLGKADPAKLLQVTSMDRYVKYHVREFERTFDAKFPAC 184

Query: 194 SIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGF 253
           S+AAK+HIDQSTTILDVQGVGLKS  KAAR+LI+++QKIDGDNYPETLNRMFIINAGSGF
Sbjct: 185 SLAAKRHIDQSTTILDVQGVGLKSLTKAARDLISRLQKIDGDNYPETLNRMFIINAGSGF 244

Query: 254 RMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDK 313
           RMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGG+CTCAD+GGCMRSDK
Sbjct: 245 RMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMRSDK 304

Query: 314 GPWKDPDILKMVQNGDHKCKNMGGAQKPEEKTISED-------------ETISFKLFTGV 360
           GPW DP+I+KMVQ+GDHKC    G   P+EKTI ED             + I+  LFTGV
Sbjct: 305 GPWNDPEIMKMVQDGDHKCAKKCGTHYPDEKTICEDDLSNSKYDACKAPQAINSPLFTGV 364

Query: 361 MAFVMGIVTMIRVTKNMPKKLTDATIYSNPGYNVDEV--DRHKSTPGIYGAEYIAVMKRM 418
           MA V GIVTMI+VT+N+P+KLTDATIYSNP Y  D     R + +P    A+Y+ V+KRM
Sbjct: 365 MALVTGIVTMIKVTRNVPRKLTDATIYSNPDYCDDTSVKGREQQSPATSSADYMTVLKRM 424

Query: 419 AELEDAVTILSAKPAAMLAEKEEMLNAAVSRVDALEQELMSTRRALEDSLARQEELLAFI 478
           AELED V++LS+KP +M  EKEEMLNAA+SRV+ALEQELM+T++ALEDSLA+Q EL+A++
Sbjct: 425 AELEDKVSVLSSKPVSMPPEKEEMLNAAISRVEALEQELMATKKALEDSLAQQAELVAYL 484

Query: 479 D 479
           +
Sbjct: 485 E 485

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255561028|ref|XP_002521526.1| Sec14 cytosolic factor, putative [Ricinus communis] gi|223539204|gb|EEF40797.1| Sec14 cytosolic factor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224134214|ref|XP_002327784.1| predicted protein [Populus trichocarpa] gi|222836869|gb|EEE75262.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297798258|ref|XP_002867013.1| hypothetical protein ARALYDRAFT_912720 [Arabidopsis lyrata subsp. lyrata] gi|297312849|gb|EFH43272.1| hypothetical protein ARALYDRAFT_912720 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18419847|ref|NP_568006.1| protein SEC14-like 12 [Arabidopsis thaliana] gi|15215780|gb|AAK91435.1| C7A10_870/C7A10_870 [Arabidopsis thaliana] gi|23463079|gb|AAN33209.1| At4g36490/C7A10_870 [Arabidopsis thaliana] gi|332661262|gb|AEE86662.1| protein SEC14-like 12 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297836544|ref|XP_002886154.1| hypothetical protein ARALYDRAFT_900189 [Arabidopsis lyrata subsp. lyrata] gi|297331994|gb|EFH62413.1| hypothetical protein ARALYDRAFT_900189 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15224125|ref|NP_179410.1| sec.4-like phosphatidylinositol transfer-like protein [Arabidopsis thaliana] gi|4874285|gb|AAD31348.1| putative phosphatidylinositol/phophatidylcholine transfer protein [Arabidopsis thaliana] gi|330251641|gb|AEC06735.1| sec.4-like phosphatidylinositol transfer-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|4006913|emb|CAB16843.1| hypothetical protein [Arabidopsis thaliana] gi|7270597|emb|CAB80315.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449462258|ref|XP_004148858.1| PREDICTED: uncharacterized protein LOC101214906 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224105355|ref|XP_002313782.1| predicted protein [Populus trichocarpa] gi|222850190|gb|EEE87737.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query490
TAIR|locus:2115265543 SFH12 "AT4G36490" [Arabidopsis 0.687 0.620 0.775 1.1e-183
TAIR|locus:2053114558 AT2G18180 "AT2G18180" [Arabido 0.671 0.589 0.768 1.9e-177
TAIR|locus:2049319548 SFH3 "SEC14-like 3" [Arabidops 0.693 0.620 0.758 1.6e-169
TAIR|locus:2136303554 SEC14 "SECRETION 14" [Arabidop 0.681 0.602 0.719 9.8e-159
TAIR|locus:2139564554 COW1 "CAN OF WORMS1" [Arabidop 0.697 0.617 0.679 3.3e-158
TAIR|locus:2136288 614 AT4G39170 [Arabidopsis thalian 0.681 0.543 0.726 4.9e-155
TAIR|locus:2050019 637 AT2G21520 [Arabidopsis thalian 0.681 0.524 0.707 3.1e-153
TAIR|locus:2042634547 AT2G16380 [Arabidopsis thalian 0.638 0.572 0.678 5.5e-143
TAIR|locus:2018416 668 AT1G75370 [Arabidopsis thalian 0.661 0.485 0.690 2.7e-141
TAIR|locus:2013134608 AT1G19650 [Arabidopsis thalian 0.769 0.620 0.619 1.2e-140
TAIR|locus:2115265 SFH12 "AT4G36490" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1420 (504.9 bits), Expect = 1.1e-183, Sum P(2) = 1.1e-183
 Identities = 263/339 (77%), Positives = 302/339 (89%)

Query:    12 IFEDEKKTRIGSLKKVAISASNKFRHSLKRGRRSSKVMSVVEIEDVHDAEEIKAVDALRQ 71
             I + E K R+GS KK   S+S   R+S+ + RRSSKVMSV  IEDVHDAEE+KAVDA RQ
Sbjct:     4 IQDAELKPRMGSFKKR--SSSKNLRYSMTKRRRSSKVMSVEIIEDVHDAEELKAVDAFRQ 61

Query:    72 ALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKEL 131
             +LIL+ELLP +HDDYHMMLRFLKARKFD+EKTKQMW++ML+WRKEFG D +M++F+FKE+
Sbjct:    62 SLILDELLPEKHDDYHMMLRFLKARKFDLEKTKQMWTEMLRWRKEFGADTVMEEFDFKEI 121

Query:   132 SQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFP 191
              +VL+ YP GHHGVDKEG+PVYIERLGLVD+TKLMQVT M+RY+NYHV EFERTF++KFP
Sbjct:   122 DEVLKYYPQGHHGVDKEGRPVYIERLGLVDSTKLMQVTTMDRYVNYHVMEFERTFNVKFP 181

Query:   192 ACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGS 251
             ACSIAAKKHIDQSTTILDVQGVGLK+FNKAAR+LIT++QK+DGDNYPETLNRMFIINAGS
Sbjct:   182 ACSIAAKKHIDQSTTILDVQGVGLKNFNKAARDLITRLQKVDGDNYPETLNRMFIINAGS 241

Query:   252 GFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRS 311
             GFRMLWNT+KSFLDPKTTAKIHVLGNKYQSKLLEIID SELPEFLGGSCTCAD GGCMRS
Sbjct:   242 GFRMLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDESELPEFLGGSCTCADNGGCMRS 301

Query:   312 DKGPWKDPDILKMVQNGDHKCKNMGGAQKPEEKTISEDE 350
             DKGPWK+P+I+K V NGDHKC     A+   EKTI E++
Sbjct:   302 DKGPWKNPEIMKRVHNGDHKCSKGSQAENSGEKTIPEED 340
GO:0005215 "transporter activity" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0008526 "phosphatidylinositol transporter activity" evidence=IGI
TAIR|locus:2053114 AT2G18180 "AT2G18180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049319 SFH3 "SEC14-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136303 SEC14 "SECRETION 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139564 COW1 "CAN OF WORMS1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136288 AT4G39170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050019 AT2G21520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042634 AT2G16380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018416 AT1G75370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013134 AT1G19650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_VII001126
hypothetical protein (496 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
smart00516158 smart00516, SEC14, Domain in homologues of a S 1e-37
cd00170157 cd00170, SEC14, Sec14p-like lipid-binding domain 6e-36
pfam00650152 pfam00650, CRAL_TRIO, CRAL/TRIO domain 3e-32
smart0110048 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom 2e-10
pfam13716149 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain 9e-10
pfam0376548 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma 8e-09
>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S Back     alignment and domain information 
 Score =  135 bits (341), Expect = 1e-37
 Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 144 GVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQ 203
           G DK+G+PV IER G  D    ++   +E  L Y V   E+                I+ 
Sbjct: 14  GYDKDGRPVLIERAGRFD----LKSVTLEELLRYLVYVLEK------ILQEEKKTGGIEG 63

Query: 204 STTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSF 263
            T I D++G    S +     ++ +I KI  D+YPE L +++IIN    FR+LW  IK F
Sbjct: 64  FTVIFDLKG---LSMSNPDLSVLRKILKILQDHYPERLGKVYIINPPWFFRVLWKIIKPF 120

Query: 264 LDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCT 301
           LD KT  KI  +GN  + +LLE ID  +LPE LGG+  
Sbjct: 121 LDEKTREKIRFVGNDSKEELLEYIDKEQLPEELGGTLD 158

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158
>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain Back     alignment and domain information
>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 490
KOG1471317 consensus Phosphatidylinositol transfer protein SE 100.0
KOG1470324 consensus Phosphatidylinositol transfer protein PD 100.0
PF00650159 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T 99.97
smart00516158 SEC14 Domain in homologues of a S. cerevisiae phos 99.96
cd00170157 SEC14 Sec14p-like lipid-binding domain. Found in s 99.93
PF13716149 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q 99.42
PF0376555 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr 98.7
KOG4406467 consensus CDC42 Rho GTPase-activating protein [Sig 97.97
COG406475 MtrG Tetrahydromethanopterin S-methyltransferase, 92.03
TIGR0114970 mtrG N5-methyltetrahydromethanopterin:coenzyme M m 90.14
PRK0102677 tetrahydromethanopterin S-methyltransferase subuni 87.63
PF0421070 MtrG: Tetrahydromethanopterin S-methyltransferase, 85.18
>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.1e-46  Score=380.56  Aligned_cols=271  Identities=45%  Similarity=0.743  Sum_probs=246.1

Q ss_pred             CHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCccccchhhHhHHHHHhhc
Q 011229           59 DAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFKELSQVLECY  138 (490)
Q Consensus        59 ~~ee~~al~~fRq~L~~~~~LP~~~dD~~~LLRFLrArkfdvekA~~~l~~~l~WRk~~~~d~i~~d~~~~el~~v~~~~  138 (490)
                      ++.+.+.++++| |+..+++++...+|+.+|+||||||+||+++|+++|.+++.||++++.|.|+.+  .....++.+++
T Consensus        19 ~~~~~~~i~~lr-~~~~~~~l~~~~~~d~~LlRfLra~~f~ve~a~~~l~~~l~~r~~~~~d~i~~~--~~~~~~~~~~~   95 (317)
T KOG1471|consen   19 TESEEAVIAQLR-WLLQKPHLPNKYDDDFNLLRFLRARKFDVEKAKQMLKRYLNWRKRNKLDEIFED--FEEDDELLKYY   95 (317)
T ss_pred             cHHHHHHHHHHH-HHhhccCCCCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCCccHhhc--cccchhhhhhc
Confidence            567777788887 888899999766666899999999999999999999999999999999999876  23334456689


Q ss_pred             CCCCccCCCCCCcEEEEEcCcCCchhhhhhccHHHHHHHHHHHHHHHHhhhchhhhHhhhCCCCcEEEEEEcCCCCcccc
Q 011229          139 PHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSF  218 (490)
Q Consensus       139 p~~~~G~Dk~GRPVli~rlg~~dp~~l~~~~t~d~~~r~~v~~lE~~~~~~~~acs~~~~~~i~~~tvIiDl~G~sl~~~  218 (490)
                      |++++|+|++|+||++.+.|..++..++..+...++.++++..+|+.+...++.|.....+++.|+++|+|++|+++.|+
T Consensus        96 ~~~~~~~~~~g~~v~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~~I~Dl~G~~~~~~  175 (317)
T KOG1471|consen   96 PQGLHGVDKEGRPVYIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIVTIFDLKGVSLSHL  175 (317)
T ss_pred             cccccccCCCCCEEEEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEECCCCcchhH
Confidence            99999999999999999999999999999999999999999999999999999888777789999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhcccCccccceEEEEecChhhHHHHHHHhhcCChhhhcceEEcCCcchHHHHcccCCCCCCccCCC
Q 011229          219 NKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGG  298 (490)
Q Consensus       219 ~~~~~~llk~i~~ilq~~YPerL~~i~IINaP~~f~~lw~iVKpfL~~kt~~KI~~lg~~~~~~L~e~Id~~~LP~eyGG  298 (490)
                      .+..+.++++++.++|+|||++++++||||+|++|+++|++|||||+++|++||++++.++.+.|+++|+++.||.+|||
T Consensus       176 ~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~~~~~~~L~k~i~~~~LP~~yGG  255 (317)
T KOG1471|consen  176 LKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKIHVLHSKDKESLLKYIPPEVLPEEYGG  255 (317)
T ss_pred             HHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhheecCCCchhhhhhhCCHhhCccccCC
Confidence            99999999999999999999999999999999999999999999999999999997766778999999999999999999


Q ss_pred             CCcCCC---CCCCcCCCCCCCCChHHHhhhhcCCccc
Q 011229          299 SCTCAD---QGGCMRSDKGPWKDPDILKMVQNGDHKC  332 (490)
Q Consensus       299 t~~~~~---~~gc~~~~~gpw~dp~~~~~~~~g~~~~  332 (490)
                      +|.+.+   .++|..++.++|.++.+.+....+....
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (317)
T KOG1471|consen  256 TCGDLDDPNGGGCDLSDEGPWKEPEIKKGKQEIEEFG  292 (317)
T ss_pred             CccccccccCCcCcccccccccccccccccccccccc
Confidence            999974   4669999999999998877666555444

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>smart00516 SEC14 Domain in homologues of a S Back     alignment and domain information
>cd00170 SEC14 Sec14p-like lipid-binding domain Back     alignment and domain information
>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A Back     alignment and domain information
>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>COG4064 MtrG Tetrahydromethanopterin S-methyltransferase, subunit G [Coenzyme metabolism] Back     alignment and domain information
>TIGR01149 mtrG N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G Back     alignment and domain information
>PRK01026 tetrahydromethanopterin S-methyltransferase subunit G; Provisional Back     alignment and domain information
>PF04210 MtrG: Tetrahydromethanopterin S-methyltransferase, subunit G ; InterPro: IPR005866 This model describes the N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit G in methanogenic archaea Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
1aua_A296 Phosphatidylinositol Transfer Protein Sec14p From S 2e-49
3b74_A320 Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co 3e-41
3q8g_A320 Resurrection Of A Functional Phosphatidylinositol T 1e-40
1olm_A403 Supernatant Protein Factor In Complex With Rrr-Alph 1e-23
1olm_E403 Supernatant Protein Factor In Complex With Rrr-Alph 1e-23
1o6u_A403 The Crystal Structure Of Human Supernatant Protein 1e-22
1oip_A278 The Molecular Basis Of Vitamin E Retention: Structu 1e-08
1r5l_A262 Crystal Structure Of Human Alpha-tocopherol Transfe 2e-08
>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296 Back     alignment and structure 
Iteration: 1

 Score =  193 bits (491), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/265 (38%), Positives = 157/265 (59%), Gaps = 4/265 (1%)
Query: 59  DAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFG 118
           D+ + KA+  LR+ L+ +     R DD   +LRFL+ARKFD++  K+M+ +  +WRK++G
Sbjct: 27  DSAQEKALAELRK-LLEDAGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYG 84
Query: 119 TDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYH 178
           TD I+QDF + E   + + YP  +H  DK+G+PVY E LG V+  ++ +VT+ ER L   
Sbjct: 85  TDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNL 144
Query: 179 VREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYP 238
           V E+E     + PACS AA   ++ S TI+D++G+ + S   +    + +   I  + YP
Sbjct: 145 VWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISS-AYSVMSYVREASYISQNYYP 203
Query: 239 ETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGG 298
           E + + +IINA  GF   +   K FLDP T +KI +LG+ YQ +LL+ I A  LP   GG
Sbjct: 204 ERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGG 263
Query: 299 SCTCAD-QGGCMRSDKGPWKDPDIL 322
                + +GG   SD GPW+DP  +
Sbjct: 264 KSEVDESKGGLYLSDIGPWRDPKYI 288
>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320 Back     alignment and structure
>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320 Back     alignment and structure
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403 Back     alignment and structure
>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278 Back     alignment and structure
>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 1e-119
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 1e-114
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 1e-93
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 2e-87
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 3e-69
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
3pg7_A256 Neurofibromin; SEC lipid binding domain, PH domain 4e-04
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296 Back     alignment and structure
 Score =  349 bits (898), Expect = e-119
 Identities = 103/267 (38%), Positives = 156/267 (58%), Gaps = 4/267 (1%)

Query: 59  DAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFG 118
           D+ + KA+  LR+ L+ +     R DD   +LRFL+ARKFD++  K+M+ +  +WRK++G
Sbjct: 27  DSAQEKALAELRK-LLEDAGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYG 84

Query: 119 TDDIMQDFEFKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYH 178
           TD I+QDF + E   + + YP  +H  DK+G+PVY E LG V+  ++ +VT+ ER L   
Sbjct: 85  TDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNL 144

Query: 179 VREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYP 238
           V E+E     + PACS AA   ++ S TI+D++G+ + S        + +   I  + YP
Sbjct: 145 VWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYS-VMSYVREASYISQNYYP 203

Query: 239 ETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGG 298
           E + + +IINA  GF   +   K FLDP T +KI +LG+ YQ +LL+ I A  LP   GG
Sbjct: 204 ERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGG 263

Query: 299 SCTCAD-QGGCMRSDKGPWKDPDILKM 324
                + +GG   SD GPW+DP  +  
Sbjct: 264 KSEVDESKGGLYLSDIGPWRDPKYIGP 290
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320 Back     alignment and structure
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Length = 256 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query490
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 100.0
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 100.0
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 100.0
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 100.0
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 100.0
3pg7_A256 Neurofibromin; SEC lipid binding domain, PH domain 99.09
3peg_A290 Neurofibromin; SEC14 domain, pleckstrin homology d 98.8
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Back     alignment and structure
Probab=100.00  E-value=7.8e-57  Score=458.55  Aligned_cols=268  Identities=33%  Similarity=0.622  Sum_probs=245.4

Q ss_pred             ccCCCCHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCccccchhhH----
Q 011229           54 IEDVHDAEEIKAVDALRQALILEELLPSRHDDYHMMLRFLKARKFDIEKTKQMWSDMLQWRKEFGTDDIMQDFEFK----  129 (490)
Q Consensus        54 ~ed~~~~ee~~al~~fRq~L~~~~~LP~~~dD~~~LLRFLrArkfdvekA~~~l~~~l~WRk~~~~d~i~~d~~~~----  129 (490)
                      ....++++|+++|++||++|.+++ ++...|| .+||||||||+||+++|.+||+++++||+++++|+++.++.++    
T Consensus        31 ~~~~lt~~q~~~l~~lR~~l~~~~-~~~~~dD-~~LLRFLRArkfdv~kA~~mL~~~l~WRk~~~vd~i~~~~~~~~~~~  108 (320)
T 3q8g_A           31 TPGNLTKEQEEALLQFRSILLEKN-YKERLDD-STLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAE  108 (320)
T ss_dssp             STTCCCHHHHHHHHHHHHHHHHTT-CCSSCSH-HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHHHHTHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhcC-CCCCCCH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCccccccccccccccc
Confidence            345678999999999999999988 4556666 7999999999999999999999999999999999988776554    


Q ss_pred             --hHHHHHhhcCCCCccCCCCCCcEEEEEcCcCCchhhhhhccHHHHHHHHHHHHHHHHhhhchhhhHhhhCCCCcEEEE
Q 011229          130 --ELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTI  207 (490)
Q Consensus       130 --el~~v~~~~p~~~~G~Dk~GRPVli~rlg~~dp~~l~~~~t~d~~~r~~v~~lE~~~~~~~~acs~~~~~~i~~~tvI  207 (490)
                        +...+.++|++++||+|++||||+|+++|++|++++.+.++.+++++++++.+|.+++..+++|+...+..++++++|
T Consensus       109 ~~e~~~~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~I  188 (320)
T 3q8g_A          109 DKERIKLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTV  188 (320)
T ss_dssp             HHHHHHHHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEE
T ss_pred             hhHHHHHHHhCCceecCCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEE
Confidence              344567889999999999999999999999999998888899999999999999999887888887777789999999


Q ss_pred             EEcCCCCcccccHHHHHHHHHHHHHhcccCccccceEEEEecChhhHHHHHHHhhcCChhhhcceEEcCCcchHHHHccc
Q 011229          208 LDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEII  287 (490)
Q Consensus       208 iDl~G~sl~~~~~~~~~llk~i~~ilq~~YPerL~~i~IINaP~~f~~lw~iVKpfL~~kt~~KI~~lg~~~~~~L~e~I  287 (490)
                      +|++|+|++++++ ..++++.+++++|++||+||+++||||+|++|+++|+++||||+++|++||+|+++++.+.|.++|
T Consensus       189 iD~~g~sl~~~~~-~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~i  267 (320)
T 3q8g_A          189 LDLKGISLSNAYH-VLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQI  267 (320)
T ss_dssp             EECTTCCHHHHHH-THHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTTHHHHHHHHS
T ss_pred             EECCCCCHHHHHH-HHHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCCcHHHHHhhC
Confidence            9999999999875 378899999999999999999999999999999999999999999999999999988888999999


Q ss_pred             CCCCCCccCCCCCcCCC-CCCCcCCCCCCCCChHHHhh
Q 011229          288 DASELPEFLGGSCTCAD-QGGCMRSDKGPWKDPDILKM  324 (490)
Q Consensus       288 d~~~LP~eyGGt~~~~~-~~gc~~~~~gpw~dp~~~~~  324 (490)
                      |+++||++|||+++|.+ +|||+.+|.|||++|++++.
T Consensus       268 ~~~~LP~~yGG~~~~~~~~ggc~~~~~gpw~~~~~~~~  305 (320)
T 3q8g_A          268 PIENLPVKYGGTSVLHNPNDKFYYSDIGPWRDPRYIGP  305 (320)
T ss_dssp             CGGGSBGGGTSCBCCSSTTSCGGGBCBSGGGCTTTCCT
T ss_pred             ChhhCChhhCCCCCCCCCCCCeecCCCCCCCChhhcCC
Confidence            99999999999999987 69999999999999988653
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Back     alignment and structure
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 490
d1auaa2203 c.13.1.1 (A:97-299) C-terminal domain of phosphati 3e-63
d1olma3199 c.13.1.1 (A:76-274) Supernatant protein factor (SP 1e-51
d1r5la2185 c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot 8e-28
d1auaa193 a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl 2e-21
d1olma175 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), 1e-16
d1r5la166 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei 2e-12
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  202 bits (514), Expect = 3e-63
 Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 2/198 (1%)

Query: 128 FKELSQVLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFD 187
           + E   + + YP  +H  DK+G+PVY E LG V+  ++ +VT+ ER L   V E+E    
Sbjct: 1   YDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQ 60

Query: 188 IKFPACSIAAKKHIDQSTTILDVQGVGLKSFNKAARELITQIQKIDGDNYPETLNRMFII 247
            + PACS AA   ++ S TI+D++G+ + S        + +   I  + YPE + + +II
Sbjct: 61  YRLPACSRAAGHLVETSCTIMDLKGISISSAYS-VMSYVREASYISQNYYPERMGKFYII 119

Query: 248 NAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTCAD-QG 306
           NA  GF   +   K FLDP T +KI +LG+ YQ +LL+ I A  LP   GG     + +G
Sbjct: 120 NAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDESKG 179

Query: 307 GCMRSDKGPWKDPDILKM 324
           G   SD GPW+DP  +  
Sbjct: 180 GLYLSDIGPWRDPKYIGP 197
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199 Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93 Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75 Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query490
d1auaa2203 C-terminal domain of phosphatidylinositol transfer 100.0
d1olma3199 Supernatant protein factor (SPF), middle domain {H 100.0
d1r5la2185 Alpha-tocopherol transfer protein {Human (Homo sap 99.97
d1olma175 Supernatant protein factor (SPF), N-terminal domai 99.52
d1auaa193 N-terminal domain of phosphatidylinositol transfer 99.43
d1r5la166 Alpha-tocopherol transfer protein {Human (Homo sap 99.26
d1uk5a_111 BAG-family molecular chaperone regulator-3 {Mouse 84.83
d1ugoa_99 BAG-family molecular chaperone regulator-5, BAG-5 84.52
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.2e-40  Score=313.05  Aligned_cols=189  Identities=38%  Similarity=0.693  Sum_probs=176.4

Q ss_pred             HHhhcCCCCccCCCCCCcEEEEEcCcCCchhhhhhccHHHHHHHHHHHHHHHHhhhchhhhHhhhCCCCcEEEEEEcCCC
Q 011229          134 VLECYPHGHHGVDKEGQPVYIERLGLVDATKLMQVTNMERYLNYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGV  213 (490)
Q Consensus       134 v~~~~p~~~~G~Dk~GRPVli~rlg~~dp~~l~~~~t~d~~~r~~v~~lE~~~~~~~~acs~~~~~~i~~~tvIiDl~G~  213 (490)
                      +.++||+++||+|++||||+|+++|++|+.++.+..+.+++++++++.+|.+++...+.++...+.+++++++|+|++|+
T Consensus         7 ~~~~~p~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g~   86 (203)
T d1auaa2           7 IAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGI   86 (203)
T ss_dssp             HGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTC
T ss_pred             HHHHCCCcCCCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCCC
Confidence            67899999999999999999999999999999998999999999999999999877776666677889999999999999


Q ss_pred             CcccccHHHHHHHHHHHHHhcccCccccceEEEEecChhhHHHHHHHhhcCChhhhcceEEcCCcchHHHHcccCCCCCC
Q 011229          214 GLKSFNKAARELITQIQKIDGDNYPETLNRMFIINAGSGFRMLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELP  293 (490)
Q Consensus       214 sl~~~~~~~~~llk~i~~ilq~~YPerL~~i~IINaP~~f~~lw~iVKpfL~~kt~~KI~~lg~~~~~~L~e~Id~~~LP  293 (490)
                      |++++++ ...+++.++++++++||++++++||||+|++|+++|+++++||+++|++||+++++++.+.|.++||+++||
T Consensus        87 s~~~~~~-~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~~~~~L~~~id~~~LP  165 (203)
T d1auaa2          87 SISSAYS-VMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP  165 (203)
T ss_dssp             CHHHHHH-HHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSB
T ss_pred             ChHHhhh-HHHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCCCCHHHHHhhCCHhhCh
Confidence            9999864 467889999999999999999999999999999999999999999999999999988889999999999999


Q ss_pred             ccCCCCCcCCC-CCCCcCCCCCCCCChHHHh
Q 011229          294 EFLGGSCTCAD-QGGCMRSDKGPWKDPDILK  323 (490)
Q Consensus       294 ~eyGGt~~~~~-~~gc~~~~~gpw~dp~~~~  323 (490)
                      .+|||+|+|.+ .|+|...+.|||+||++.+
T Consensus       166 ~~~GG~~~~~~~~g~~~~~~~~~~~~p~~~~  196 (203)
T d1auaa2         166 VKFGGKSEVDESKGGLYLSDIGPWRDPKYIG  196 (203)
T ss_dssp             GGGTSCBCCCGGGCCSTTCCCSGGGCGGGCC
T ss_pred             HHhCCCCcCCCCCCCccccCCCCCCChhhcC
Confidence            99999999965 4999999999999998754
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ugoa_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-5, BAG-5 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure