Citrus Sinensis ID: 011283
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 489 | 2.2.26 [Sep-21-2011] | |||||||
| Q6Q8A5 | 499 | Hexokinase-2, chloroplast | N/A | no | 0.995 | 0.975 | 0.784 | 0.0 | |
| Q6Z398 | 509 | Hexokinase-4, chloroplast | yes | no | 0.907 | 0.872 | 0.750 | 0.0 | |
| Q9FZG4 | 493 | Hexokinase-like 1 protein | yes | no | 0.983 | 0.975 | 0.679 | 0.0 | |
| Q42525 | 496 | Hexokinase-1 OS=Arabidops | no | no | 0.934 | 0.921 | 0.607 | 1e-161 | |
| Q9SEK3 | 498 | Hexokinase-1 OS=Spinacia | N/A | no | 0.928 | 0.911 | 0.592 | 1e-157 | |
| P93834 | 502 | Hexokinase-2 OS=Arabidops | no | no | 0.928 | 0.904 | 0.596 | 1e-155 | |
| Q9SQ76 | 496 | Hexokinase-2 OS=Solanum t | N/A | no | 0.928 | 0.915 | 0.585 | 1e-154 | |
| Q9SEK2 | 497 | Hexokinase-1 OS=Nicotiana | N/A | no | 0.973 | 0.957 | 0.552 | 1e-153 | |
| Q8LQ68 | 506 | Hexokinase-6 OS=Oryza sat | no | no | 0.918 | 0.887 | 0.582 | 1e-152 | |
| Q2KNB7 | 502 | Hexokinase-9 OS=Oryza sat | no | no | 0.924 | 0.900 | 0.553 | 1e-151 |
| >sp|Q6Q8A5|HXK2_TOBAC Hexokinase-2, chloroplastic OS=Nicotiana tabacum GN=HXK2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/492 (78%), Positives = 426/492 (86%), Gaps = 5/492 (1%)
Query: 3 PAVGSLCISRTPR---GGPRFTMA-VRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMT 58
PA S ISR+P PR +A VRS V+++VAPILTKLQK+CA PLPVLR+VADAM
Sbjct: 8 PAGRSFHISRSPYKKISKPRVIIAAVRSGVSLAVAPILTKLQKDCATPLPVLRHVADAMA 67
Query: 59 ADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQA 118
DMRAGL VDGG +LKMILSY+D LPTGNE+GLFYALDLGGTNFRVLRVQLGG+EERV A
Sbjct: 68 VDMRAGLAVDGGSDLKMILSYIDTLPTGNEKGLFYALDLGGTNFRVLRVQLGGKEERVIA 127
Query: 119 TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQT 178
TEFEQVSIPQELM TSEELFDFIA+ L KF++ E GKF + QGR REIGFTFSFPVKQT
Sbjct: 128 TEFEQVSIPQELMFATSEELFDFIASELGKFSQSEGGKFEMQQGRTREIGFTFSFPVKQT 187
Query: 179 SIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238
S+ SG+LIKWTKGF+VSGTAGKDVVACLNEAMERQGL M+VSALVNDTV TLAGARYWD
Sbjct: 188 SVKSGILIKWTKGFAVSGTAGKDVVACLNEAMERQGLGMQVSALVNDTVATLAGARYWDN 247
Query: 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDA 298
DVMVAVILGTGTNACYVE++DAIPKL S S TI+NTEWGAFS GLPLTEFDR+MDA
Sbjct: 248 DVMVAVILGTGTNACYVERVDAIPKLPQRMSNSPETIVNTEWGAFSNGLPLTEFDREMDA 307
Query: 299 ASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNS-VPEKLSMPFVLRTPHICAM 357
SINPGEQI+EKTISGMYLGEIVRRVL+KMA+ G LFG VPEKL PFVLRTP ICAM
Sbjct: 308 ESINPGEQIFEKTISGMYLGEIVRRVLVKMAKVGGLFGGGYVPEKLVTPFVLRTPDICAM 367
Query: 358 QQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDED 417
QQD S DL+AV S LYD+AGV+S L ARK V+++CDTI RGGRLAGAGIV ILQK++ED
Sbjct: 368 QQDTSRDLEAVESVLYDIAGVKSDLSARKTVVDICDTIANRGGRLAGAGIVGILQKMEED 427
Query: 418 SNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAAL 477
S G IFGKRTVVAMDGGLYEHY QYR Y+ EAVTELLG+EISKNVVIEH+KDGSGIGAAL
Sbjct: 428 SKGVIFGKRTVVAMDGGLYEHYPQYREYLQEAVTELLGSEISKNVVIEHSKDGSGIGAAL 487
Query: 478 LASANSKFDHDY 489
LA+ANSK++HDY
Sbjct: 488 LAAANSKYEHDY 499
|
Fructose and glucose phosphorylating enzyme. Nicotiana tabacum (taxid: 4097) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1 |
| >sp|Q6Z398|HXK4_ORYSJ Hexokinase-4, chloroplastic OS=Oryza sativa subsp. japonica GN=HXK4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/445 (75%), Positives = 382/445 (85%), Gaps = 1/445 (0%)
Query: 31 SVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERG 90
++APIL L+ CAAPLPVLR VADAM + MRAGL DG GELKMI S+V +LPTGNE G
Sbjct: 46 AIAPILADLRLRCAAPLPVLRRVADAMASGMRAGLADDGAGELKMIPSHVYSLPTGNETG 105
Query: 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFA 150
LFYALDLGGTNFRVLRVQLGG+++R+ TEFEQVSIP+E+M G +E+LFDFIA+GL++F
Sbjct: 106 LFYALDLGGTNFRVLRVQLGGKDKRIIDTEFEQVSIPREIMHGITEDLFDFIASGLSRFV 165
Query: 151 EKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAM 210
E KFHLPQGR+RE+GFTFSFPV QTSIDSG+LIKWTKGF+VSGTAGKDVVACLN AM
Sbjct: 166 ATEGDKFHLPQGRKRELGFTFSFPVNQTSIDSGILIKWTKGFAVSGTAGKDVVACLNAAM 225
Query: 211 ERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSP 270
ERQGLDMRVSALVNDTVGTLAGARYWD+DVMVAVILGTGTNACY+++ +AIPKLQ K
Sbjct: 226 ERQGLDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYIQRTEAIPKLQHLKLE 285
Query: 271 SGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAE 330
+G TIINTEWGAFS GLPLTEFDR+MD SINPGEQI+EKTISGMYLGEIVRRVL+KMAE
Sbjct: 286 TGNTIINTEWGAFSDGLPLTEFDREMDDESINPGEQIFEKTISGMYLGEIVRRVLVKMAE 345
Query: 331 EGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSLKARKVVI 389
LFG+S P+KL+ PFVLRTPH+CAMQQD S++L V S L DV GV ++SL AR+V +
Sbjct: 346 VSDLFGHSFPKKLAEPFVLRTPHLCAMQQDTSDNLGEVESILSDVIGVSQASLLARRVTV 405
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
EV D I++RGGRLAGAGIV IL+K++ DS G IFG+RTVVAMDGGLYE Y QYRRY+ EA
Sbjct: 406 EVSDCIIRRGGRLAGAGIVGILEKMENDSRGHIFGRRTVVAMDGGLYEKYPQYRRYMKEA 465
Query: 450 VTELLGTEISKNVVIEHTKDGSGIG 474
V ELLG E S + IEHTKDGSGIG
Sbjct: 466 VAELLGPERSNRIAIEHTKDGSGIG 490
|
Fructose and glucose phosphorylating enzyme. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9FZG4|HXKL1_ARATH Hexokinase-like 1 protein OS=Arabidopsis thaliana GN=At1g47840 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/484 (67%), Positives = 384/484 (79%), Gaps = 3/484 (0%)
Query: 3 PAVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMR 62
PA+GS S PR AVRSN + S PILTK QK+CA P P LRNVA+A+ DMR
Sbjct: 12 PALGSFTFSSRPRSNYIVMSAVRSN-SASTCPILTKFQKDCATPTPYLRNVANAIADDMR 70
Query: 63 AGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFE 122
GL V+GGG+L+MIL++VDALP+GNE GLFYALDLGGTNFRV VQLGG++ERV ATE E
Sbjct: 71 DGLAVEGGGDLEMILTFVDALPSGNEEGLFYALDLGGTNFRVRSVQLGGKKERVLATESE 130
Query: 123 QVSIPQELMCGTSEELFDFIATGLAKFAEKEA-GKFHLPQGRQREIGFTFSFPVKQTSID 181
Q+SI Q+LM GTSEELF FIA+ LA F KE G+F L +GR+RE+GFTFSFPVKQTSID
Sbjct: 131 QISISQKLMIGTSEELFGFIASKLANFVAKEKPGRFLLEEGRKRELGFTFSFPVKQTSID 190
Query: 182 SGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVM 241
SG L KWTKGF VSG GK+VVACLNEAME GLDMRVSALVND VGTLAGARYWDEDVM
Sbjct: 191 SGTLSKWTKGFKVSGMEGKNVVACLNEAMEAHGLDMRVSALVNDGVGTLAGARYWDEDVM 250
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASI 301
V VILGTGTNACYVEQ AIPKL+ +KS SG TIINTEWG FSK LP T FD +MD S+
Sbjct: 251 VGVILGTGTNACYVEQKHAIPKLR-SKSSSGTTIINTEWGGFSKILPQTIFDLEMDETSL 309
Query: 302 NPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDY 361
NPGE +YEK ISGMYLGEIVRRVLL M E LFG+ P KLS P LRT H+C MQ+D
Sbjct: 310 NPGEHLYEKMISGMYLGEIVRRVLLHMCETSDLFGHFAPAKLSTPLALRTEHLCKMQEDN 369
Query: 362 SEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421
++DL+ VGS LYD VE+++ AR+ V+EVCDT+VKRGGRLAGAGIV+IL+KI++D+
Sbjct: 370 TDDLRDVGSILYDFLDVEANMNARRRVVEVCDTVVKRGGRLAGAGIVAILEKIEKDTKRM 429
Query: 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASA 481
GKRTVVAMDG LYE Y QYR+Y+ +A+ ELLG +++ +V I+HTKD SG+GAALLA+
Sbjct: 430 GSGKRTVVAMDGALYEKYPQYRQYMQDALVELLGHKLASHVAIKHTKDVSGLGAALLAAT 489
Query: 482 NSKF 485
NS +
Sbjct: 490 NSIY 493
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q42525|HXK1_ARATH Hexokinase-1 OS=Arabidopsis thaliana GN=HXK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 569 bits (1466), Expect = e-161, Method: Compositional matrix adjust.
Identities = 279/459 (60%), Positives = 346/459 (75%), Gaps = 2/459 (0%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL 91
V IL +++CA P+ LR VADAMT +M AGL DGG +LKM++SYVD LP+G+E+GL
Sbjct: 37 VLAILKAFEEDCATPISKLRQVADAMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGL 96
Query: 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE 151
FYALDLGGTNFRV+RV LGG++ERV EFE+VSIP LM G S+ELF+FIA LAKF
Sbjct: 97 FYALDLGGTNFRVMRVLLGGKQERVVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVA 156
Query: 152 KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME 211
E FHLP+GRQRE+GFTFSFPVKQTS+ SG LIKWTKGFS+ G+DVV LN+A+E
Sbjct: 157 TECEDFHLPEGRQRELGFTFSFPVKQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALE 216
Query: 212 RQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPS 271
R GLDMR++ALVNDTVGTLAG RY++ DV+ AVILGTGTNA YVE+ AIPK G S
Sbjct: 217 RVGLDMRIAALVNDTVGTLAGGRYYNPDVVAAVILGTGTNAAYVERATAIPKWHGLLPKS 276
Query: 272 GRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAE 330
G +IN EWG F S LPLTEFD +D S+NPGEQI EK ISGMYLGEI+RRVLLKMAE
Sbjct: 277 GEMVINMEWGNFRSSHLPLTEFDHTLDFESLNPGEQILEKIISGMYLGEILRRVLLKMAE 336
Query: 331 EGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSLKARKVVI 389
+ A FG++VP KL +PF++RTPH+ AM D S DL+ VGS + D+ V +SLK RKVVI
Sbjct: 337 DAAFFGDTVPSKLRIPFIIRTPHMSAMHNDTSPDLKIVGSKIKDILEVPTTSLKMRKVVI 396
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
+C+ I RG RL+ AGI IL+K+ D+ +++V+AMDGGL+EHYTQ+ + +
Sbjct: 397 SLCNIIATRGARLSAAGIYGILKKLGRDTTKDEEVQKSVIAMDGGLFEHYTQFSECMESS 456
Query: 450 VTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFDHD 488
+ ELLG E S +V + H+ DGSGIGAALLA+++S + D
Sbjct: 457 LKELLGDEASGSVEVTHSNDGSGIGAALLAASHSLYLED 495
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol. Acts as sugar sensor which may regulate sugar-dependent gene repression or activation. Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism. May regulate the execution of program cell death in plant cells. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SEK3|HXK1_SPIOL Hexokinase-1 OS=Spinacia oleracea GN=HXK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 555 bits (1430), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/456 (59%), Positives = 345/456 (75%), Gaps = 2/456 (0%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL 91
V IL +L C PL LR VADAMT +M AGL +G +LKM++SYVD LPTG+E GL
Sbjct: 37 VMAILKELDDNCGTPLGKLRQVADAMTVEMHAGLASEGASKLKMLISYVDNLPTGDEHGL 96
Query: 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE 151
FYALDLGGTNFRVLRV+LGG+E+RV EF++VSIP ELM GTSE+LFD+IA LAKF
Sbjct: 97 FYALDLGGTNFRVLRVKLGGKEKRVVEQEFDEVSIPPELMVGTSEQLFDYIAEALAKFVA 156
Query: 152 KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME 211
E+ H +QRE+GFTFSFPVKQTSI SG LI+WTKGF++ T G+DVVA L +AM
Sbjct: 157 TESEGLHPEPNKQRELGFTFSFPVKQTSIASGTLIRWTKGFNIEDTVGEDVVAELTKAML 216
Query: 212 RQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPS 271
R+G+DMRV+ALVNDTVGTLAG RY+ EDV+ AVILGTGTNA YVE+ AI K G S
Sbjct: 217 RKGVDMRVTALVNDTVGTLAGGRYYKEDVIAAVILGTGTNAAYVERASAIHKWHGPLPKS 276
Query: 272 GRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAE 330
G +IN EWG F S LPLTE+D +D S+NPGEQI+EK ISGMYLGEIVRRVL +MA+
Sbjct: 277 GEMVINMEWGNFRSSYLPLTEYDIALDEESLNPGEQIFEKMISGMYLGEIVRRVLYRMAD 336
Query: 331 EGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSLKARKVVI 389
E +LFG++VP KL PF+LRTP + AM D S DL+ V S L DV G+ SSLK RK+++
Sbjct: 337 EASLFGDTVPSKLKTPFILRTPDMSAMHHDTSPDLKVVASKLKDVLGIPNSSLKVRKIIV 396
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
+VCD I RG ++ AGI+ I++K+ D+ +++V+A+DGGL+EHY ++R + ++
Sbjct: 397 DVCDVIASRGACISAAGILGIIKKLGRDTLKQGENQKSVIALDGGLFEHYAKFRECMEDS 456
Query: 450 VTELLGTEISKNVVIEHTKDGSGIGAALLASANSKF 485
+ ELLG E+++ +VIEH+ DGSGIGAALLA+++S++
Sbjct: 457 LKELLGDEVAETIVIEHSNDGSGIGAALLAASHSQY 492
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems not to be involved in cell sugar sensing. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|P93834|HXK2_ARATH Hexokinase-2 OS=Arabidopsis thaliana GN=HXK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/456 (59%), Positives = 336/456 (73%), Gaps = 2/456 (0%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL 91
V IL +++CA P+ LR VADAMT +M AGL +GG +LKM++SYVD LP+G+E G
Sbjct: 37 VIEILKAFEEDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGF 96
Query: 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE 151
FYALDLGGTNFRV+RV LGG+ +RV EF++ SIP LM G S ELFDFI LAKF
Sbjct: 97 FYALDLGGTNFRVMRVLLGGKHDRVVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVA 156
Query: 152 KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME 211
E FHLP GRQRE+GFTFSFPVKQ S+ SG LI WTKGFS+ T KDVV L +AME
Sbjct: 157 TEGEDFHLPPGRQRELGFTFSFPVKQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAME 216
Query: 212 RQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPS 271
R GLDM V+ALVNDT+GTLAG RY + DV+VAVILGTGTNA YVE+ AIPK G S
Sbjct: 217 RVGLDMLVAALVNDTIGTLAGGRYTNPDVVVAVILGTGTNAAYVERAHAIPKWHGLLPKS 276
Query: 272 GRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAE 330
G +IN EWG F S LPLTE+D +D S+NPGEQI EK ISGMYLGEI+RRVLLKMAE
Sbjct: 277 GEMVINMEWGNFRSSHLPLTEYDHSLDVDSLNPGEQILEKIISGMYLGEILRRVLLKMAE 336
Query: 331 EGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVI 389
E A FG+ VP KL +PF++RTP++ AM D S DL+ VGS L D+ V+ SSLK RKVVI
Sbjct: 337 EAAFFGDIVPPKLKIPFIIRTPNMSAMHSDTSPDLKVVGSKLKDILEVQTSSLKMRKVVI 396
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
+C+ I RG RL+ AGI IL+KI D+ +++V+AMDGGL+EHYTQ+ + +
Sbjct: 397 SLCNIIASRGARLSAAGIYGILKKIGRDATKDGEAQKSVIAMDGGLFEHYTQFSESMKSS 456
Query: 450 VTELLGTEISKNVVIEHTKDGSGIGAALLASANSKF 485
+ ELLG E+S++V + + DGSG+GAALLA+++S++
Sbjct: 457 LKELLGDEVSESVEVILSNDGSGVGAALLAASHSQY 492
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol. Acts as sugar sensor which may regulate sugar-dependent gene repression or activation. Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism. May regulate the execution of program cell death in plant cells. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SQ76|HXK2_SOLTU Hexokinase-2 OS=Solanum tuberosum GN=HXK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 545 bits (1405), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/456 (58%), Positives = 339/456 (74%), Gaps = 2/456 (0%)
Query: 35 ILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYA 94
IL + +++CA P L+ VADAMT +M AGL +GG +LKM++SYVD LPTG+E G+FYA
Sbjct: 40 ILKEFEEKCATPDGKLKQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEGGVFYA 99
Query: 95 LDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEA 154
LDLGGTNFRVLRVQLGG++ + EF + SIP LM GTSE LFD+IA LAKF +E
Sbjct: 100 LDLGGTNFRVLRVQLGGKDGGIIHQEFAEASIPPNLMVGTSEALFDYIAAELAKFVAEEG 159
Query: 155 GKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG 214
+FH P GRQRE+GFTFSFP+ QTSI+SG LI+WTKGFS+ T GKDVVA L +AM+++
Sbjct: 160 EEFHPPPGRQRELGFTFSFPIMQTSINSGTLIRWTKGFSIDDTVGKDVVAELTKAMQKRE 219
Query: 215 LDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRT 274
+DMRVSALVNDTVGTLAG R+ ++DV +AVILGTGTNA YVE+ AIPK G SG
Sbjct: 220 IDMRVSALVNDTVGTLAGGRFTNKDVSIAVILGTGTNAAYVERAQAIPKWHGPLPKSGEM 279
Query: 275 IINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGA 333
+IN EWG F S LPLTE+D MD S+NPGEQI+EK SGMYLGEI+RRVLL+MAEE
Sbjct: 280 VINMEWGNFRSSHLPLTEYDHAMDTNSLNPGEQIFEKICSGMYLGEILRRVLLRMAEEAG 339
Query: 334 LFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSLKARKVVIEVC 392
+FG VP KL F+LRTP + AM D S DL+ VG L D+ + SSLK R++V+E+C
Sbjct: 340 IFGEEVPPKLKNSFILRTPEMSAMHHDTSSDLRVVGDKLKDILEISNSSLKTRRLVVELC 399
Query: 393 DTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTE 452
+ + RG RLA AGI+ I++K+ +D+ ++ VVAMDGGLYEHYT+Y + + + E
Sbjct: 400 NIVATRGARLAAAGILGIIKKMGKDTPRESGPEKIVVAMDGGLYEHYTEYSKCLENTLVE 459
Query: 453 LLGTEISKNVVIEHTKDGSGIGAALLASANSKFDHD 488
LLG E++ ++V +H DGSGIGAALLA++NS + D
Sbjct: 460 LLGKEMATSIVFKHANDGSGIGAALLAASNSVYVED 495
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SEK2|HXK1_TOBAC Hexokinase-1 OS=Nicotiana tabacum GN=HXK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 542 bits (1396), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/487 (55%), Positives = 349/487 (71%), Gaps = 11/487 (2%)
Query: 4 AVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRA 63
AV +L ++ R ++ A+ IL + +++C P L+ VADAMT +M A
Sbjct: 18 AVAALIVNHRMRKSSKWARAM---------AILREFEEKCGTPDAKLKQVADAMTVEMHA 68
Query: 64 GLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQ 123
GL +GG +LKM+++YVD LPTG+E G+FYALDLGGTNFRVLRVQLGG++ + EF +
Sbjct: 69 GLASEGGSKLKMLITYVDNLPTGDEAGVFYALDLGGTNFRVLRVQLGGKDGGIVHQEFAE 128
Query: 124 VSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSG 183
SIP LM GTSE LFD+IA LAKF +E KF P G+QRE+GFTFSFPV QTSI+SG
Sbjct: 129 ASIPPNLMVGTSEALFDYIAAELAKFVNEEGEKFQQPPGKQRELGFTFSFPVMQTSINSG 188
Query: 184 VLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVA 243
+++WTKGFS+ G+DVV L +AM+R+G+DMRVSALVNDTVGTLAG +Y DV VA
Sbjct: 189 TIMRWTKGFSIDDAVGQDVVGELAKAMKRKGVDMRVSALVNDTVGTLAGGKYTHNDVAVA 248
Query: 244 VILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAF-SKGLPLTEFDRDMDAASIN 302
VILGTGTNA YVE++ AIPK G SG +IN EWG F S LPLT++D +D S+N
Sbjct: 249 VILGTGTNAAYVERVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTQYDHALDTNSLN 308
Query: 303 PGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYS 362
PG+QI+EK SGMYLGEI+RRVLL++AEE +FG+ VP KL PFVLRTP + AM D S
Sbjct: 309 PGDQIFEKMTSGMYLGEILRRVLLRVAEEAGIFGDEVPPKLKSPFVLRTPDMSAMHHDAS 368
Query: 363 EDLQAVGSTLYDVAGV-ESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421
DL+ VG L D+ + +SLK R++VIE+C+ + RG RLA AG++ IL+K+ D+
Sbjct: 369 SDLRVVGDKLKDILEISNTSLKTRRLVIELCNIVATRGARLAAAGVLGILKKMGRDTPRQ 428
Query: 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASA 481
++TVVAMDGGLYEHYT+YR + + ELLG E++ ++V EH+ DGSGIGAALLA++
Sbjct: 429 GGLEKTVVAMDGGLYEHYTEYRMCLENTLKELLGDELATSIVFEHSNDGSGIGAALLAAS 488
Query: 482 NSKFDHD 488
NS + D
Sbjct: 489 NSMYLED 495
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Nicotiana tabacum (taxid: 4097) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q8LQ68|HXK6_ORYSJ Hexokinase-6 OS=Oryza sativa subsp. japonica GN=HXK6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 537 bits (1383), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/455 (58%), Positives = 341/455 (74%), Gaps = 6/455 (1%)
Query: 36 LTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYAL 95
+ ++++ + P +LR +ADAM +M GL D LKM++SYVD LPTG+E GLFYAL
Sbjct: 49 IEEVEQRFSTPTALLRGIADAMVEEMERGLRADPHAPLKMLISYVDNLPTGDEHGLFYAL 108
Query: 96 DLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAG 155
DLGGTNFRV+RVQLGG+E+RV + ++E+V+IP LM GTS ELFDFIA L F + E
Sbjct: 109 DLGGTNFRVIRVQLGGREKRVVSQQYEEVAIPPHLMVGTSMELFDFIAAELESFVKTEGE 168
Query: 156 KFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGL 215
FHLP+GRQRE+GFTFSFPV QTSI SG LIKWTKGFS++GT G+DVVA L+ AMERQGL
Sbjct: 169 DFHLPEGRQRELGFTFSFPVHQTSISSGTLIKWTKGFSINGTVGEDVVAELSRAMERQGL 228
Query: 216 DMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTI 275
DM+V+ALVNDTVGTLAG RY D DV AVILGTGTNA YVE +AIPK G SG +
Sbjct: 229 DMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTGTNAAYVEHANAIPKWTGLLPRSGNMV 288
Query: 276 INTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGAL 334
IN EWG F S+ LP +++D +D S+NPGEQIYEK ISGMYLGEIVRR+LLK+A + +L
Sbjct: 289 INMEWGNFKSERLPRSDYDNALDFESLNPGEQIYEKMISGMYLGEIVRRILLKLAHDASL 348
Query: 335 FGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSLKARKVVIEVCD 393
FG+ VP KL F+LRTP + AM D S DL+ +G+ L D+ GV ++SL+AR + + VCD
Sbjct: 349 FGDVVPTKLEQRFILRTPDMSAMHHDTSHDLKHLGAKLKDILGVADTSLEARYITLHVCD 408
Query: 394 TIVKRGGRLAGAGIVSILQKIDED---SNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAV 450
+ +RG RLA AGI IL+K+ D S+G+ +RTV+A+DGGLYEHY ++R + +
Sbjct: 409 LVAERGARLAAAGIYGILKKLGRDRVPSDGSQ-KQRTVIALDGGLYEHYKKFRTCLEATL 467
Query: 451 TELLGTEISKNVVIEHTKDGSGIGAALLASANSKF 485
+LLG E + +VV++ DGSGIGAALLA+++S++
Sbjct: 468 ADLLGEEAASSVVVKLANDGSGIGAALLAASHSQY 502
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q2KNB7|HXK9_ORYSJ Hexokinase-9 OS=Oryza sativa subsp. japonica GN=HXK9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 536 bits (1380), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/455 (55%), Positives = 343/455 (75%), Gaps = 3/455 (0%)
Query: 33 APILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLF 92
A +L LQ+ CAAP+ +LR VADAM A+MRAGL +GG +L+M+++YVD+LP+G E+G+F
Sbjct: 40 AVLLRDLQERCAAPVELLRQVADAMAAEMRAGLAAEGGSDLQMLVTYVDSLPSGGEKGMF 99
Query: 93 YALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEK 152
YALDLGGTNFRVLRVQLGG+E R+ + E +SIPQ LM +S ELFDF+A LAKF
Sbjct: 100 YALDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAVALAKFVAS 159
Query: 153 EAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMER 212
E HLP+G QRE+GFTFSFPVKQ S+ SG LIKWTK F++ GKDVVA LN A+
Sbjct: 160 EGEDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRS 219
Query: 213 QGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSG 272
QGLDM+V+ALVNDTVGTLA RY + D + AVILGTG+NA Y++ DAIPK G+ SG
Sbjct: 220 QGLDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSG 279
Query: 273 RTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEE 331
+IN EWG F S LPLTEFD+++DA S+NPG+Q+YEK+ISGMY+GE+VRR+LLKMA+E
Sbjct: 280 NMVINMEWGNFKSSHLPLTEFDQELDAESLNPGKQVYEKSISGMYMGELVRRILLKMAQE 339
Query: 332 GALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVIE 390
+FG+++P KL P++LRT + M D S DL+ V + L +V G+E +S RK+V++
Sbjct: 340 TRIFGDNIPPKLERPYILRTLDMLIMHHDTSSDLRTVANKLKEVLGIEYTSFTTRKLVLD 399
Query: 391 VCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAV 450
VC+ I RG RLA AGI I+QK+ + S+ +R+V+A+DGG+Y++YT + + + +
Sbjct: 400 VCEAIATRGARLAAAGIYGIIQKLGQHSDSP-STRRSVIAVDGGVYKYYTFFSQCMESTL 458
Query: 451 TELLGTEISKNVVIEHTKDGSGIGAALLASANSKF 485
+++LG E++ +V+I+H DGSG+GAALLA++ S++
Sbjct: 459 SDMLGQELAPSVMIKHVNDGSGVGAALLAASYSQY 493
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 489 | ||||||
| 255538922 | 495 | hexokinase, putative [Ricinus communis] | 0.995 | 0.983 | 0.825 | 0.0 | |
| 224083000 | 466 | predicted protein [Populus trichocarpa] | 0.952 | 1.0 | 0.820 | 0.0 | |
| 225457987 | 485 | PREDICTED: hexokinase-2, chloroplastic [ | 0.983 | 0.991 | 0.821 | 0.0 | |
| 339756003 | 485 | HXK2 [Vitis vinifera] | 0.983 | 0.991 | 0.817 | 0.0 | |
| 350539587 | 499 | plastidic hexokinase [Solanum lycopersic | 0.993 | 0.973 | 0.792 | 0.0 | |
| 18026821 | 499 | hexokinase-related protein 1 [Solanum tu | 0.995 | 0.975 | 0.788 | 0.0 | |
| 75291596 | 499 | RecName: Full=Hexokinase-2, chloroplasti | 0.995 | 0.975 | 0.784 | 0.0 | |
| 449437210 | 488 | PREDICTED: hexokinase-2, chloroplastic-l | 0.981 | 0.983 | 0.758 | 0.0 | |
| 356564363 | 500 | PREDICTED: hexokinase-2, chloroplastic-l | 0.985 | 0.964 | 0.738 | 0.0 | |
| 302142655 | 411 | unnamed protein product [Vitis vinifera] | 0.840 | 1.0 | 0.844 | 0.0 |
| >gi|255538922|ref|XP_002510526.1| hexokinase, putative [Ricinus communis] gi|223551227|gb|EEF52713.1| hexokinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/487 (82%), Positives = 441/487 (90%)
Query: 3 PAVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMR 62
PAVGS +SR+ RG P MAVRSN VSVAPILTKLQKECA PLPVLR+VAD+M+ADMR
Sbjct: 9 PAVGSFYVSRSRRGIPPIRMAVRSNAVVSVAPILTKLQKECATPLPVLRHVADSMSADMR 68
Query: 63 AGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFE 122
AGL DGG +LKMILSYVD LP+GNE+GLFYALDLGGTNFRVLRVQLGG+EERV ATEFE
Sbjct: 69 AGLAADGGSDLKMILSYVDHLPSGNEKGLFYALDLGGTNFRVLRVQLGGKEERVIATEFE 128
Query: 123 QVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDS 182
QVSIPQELM GT+++LFDFIA+GLA FA+KE GKFHLP GR+REIGFTFSFPVKQTSIDS
Sbjct: 129 QVSIPQELMFGTNDQLFDFIASGLANFAKKEGGKFHLPHGRKREIGFTFSFPVKQTSIDS 188
Query: 183 GVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMV 242
G+L+KWTKGF+VSGTAG+DVVACLNEAMERQ LDMRVSALVNDTVGTLAGARYWD+DVMV
Sbjct: 189 GILMKWTKGFAVSGTAGRDVVACLNEAMERQSLDMRVSALVNDTVGTLAGARYWDDDVMV 248
Query: 243 AVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASIN 302
AVILGTGTNACYVE+ DAIPKLQG KS SGRTI+NTEWGAFS G+PLT FDRDMDAASIN
Sbjct: 249 AVILGTGTNACYVERTDAIPKLQGQKSSSGRTIVNTEWGAFSNGIPLTVFDRDMDAASIN 308
Query: 303 PGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYS 362
PGEQI+EKTISGMYLGEI RR LLK+AEEGALFG SVPEKLS+PF LRTP +CAMQQD S
Sbjct: 309 PGEQIFEKTISGMYLGEIARRALLKIAEEGALFGQSVPEKLSIPFALRTPDLCAMQQDNS 368
Query: 363 EDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAI 422
+DL +VGS LYDV G ESSL ARK+VIEVCD IVKRGGRLAGAGIV ILQK++EDS G I
Sbjct: 369 DDLHSVGSVLYDVVGAESSLSARKIVIEVCDAIVKRGGRLAGAGIVGILQKMEEDSKGLI 428
Query: 423 FGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASAN 482
GKRTVVAMDGGLYEHY QYRRY+ +AVTELLG E SKN+VIEH+KDGSGIGAALLA+ N
Sbjct: 429 SGKRTVVAMDGGLYEHYPQYRRYLQDAVTELLGLESSKNIVIEHSKDGSGIGAALLAATN 488
Query: 483 SKFDHDY 489
SK+DHD+
Sbjct: 489 SKYDHDF 495
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224083000|ref|XP_002306924.1| predicted protein [Populus trichocarpa] gi|222856373|gb|EEE93920.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/468 (82%), Positives = 424/468 (90%), Gaps = 2/468 (0%)
Query: 22 MAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVD 81
MA+RS V SV ILTKLQ++CA PLPV+R+VAD+MTADMRAGL VDGG LKMILSYVD
Sbjct: 1 MALRSVV--SVGSILTKLQQDCATPLPVIRHVADSMTADMRAGLAVDGGSNLKMILSYVD 58
Query: 82 ALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDF 141
+LP+GNE+GLFYALDLGGTNFR LRVQLGG+EERV ATEFEQ+SIPQ LM GTSEELFDF
Sbjct: 59 SLPSGNEKGLFYALDLGGTNFRALRVQLGGKEERVVATEFEQLSIPQGLMFGTSEELFDF 118
Query: 142 IATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKD 201
IA+ LA FAEKE+ KFHLP GRQREIGFTFSFPVKQTSIDSG+L+KWTKGF+VSGTAG+D
Sbjct: 119 IASTLAGFAEKESKKFHLPHGRQREIGFTFSFPVKQTSIDSGILMKWTKGFAVSGTAGRD 178
Query: 202 VVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAI 261
VVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD+DVMVAVILGTGTNACYVE+ D I
Sbjct: 179 VVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYVERTDCI 238
Query: 262 PKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIV 321
PKLQG KS SGRTIINTEWGAFS G+PLT FDRDMDAASINPGEQI+EKTISGMYLGEI
Sbjct: 239 PKLQGPKSSSGRTIINTEWGAFSDGIPLTVFDRDMDAASINPGEQIFEKTISGMYLGEIA 298
Query: 322 RRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESS 381
RR L+ MA EG+LFG +VP KLS PF LRTP ICAMQQD S+DLQAVGS L++VAGVESS
Sbjct: 299 RRALVTMAGEGSLFGRAVPNKLSTPFALRTPDICAMQQDNSDDLQAVGSILHNVAGVESS 358
Query: 382 LKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQ 441
L ARK+V+EVCD +VKRGGRLAGAGIV ILQK++EDS G IF KRTVVAMDGGLYEHY Q
Sbjct: 359 LSARKIVLEVCDALVKRGGRLAGAGIVGILQKMEEDSKGTIFNKRTVVAMDGGLYEHYPQ 418
Query: 442 YRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFDHDY 489
YR Y+ +AVTELLG+EISKN+VIEH+KDGSGIGAALLA+ NSK+DHD+
Sbjct: 419 YRSYLQDAVTELLGSEISKNIVIEHSKDGSGIGAALLAATNSKYDHDF 466
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457987|ref|XP_002275922.1| PREDICTED: hexokinase-2, chloroplastic [Vitis vinifera] gi|391357945|gb|AFM43630.1| hexokinase 3 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/482 (82%), Positives = 432/482 (89%), Gaps = 1/482 (0%)
Query: 4 AVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRA 63
AVGS +S +P PR M VRS+ VSVAPILT LQK+CA PLPVLR+VADAM ADMRA
Sbjct: 5 AVGSFWLSPSPGKLPRPRMVVRSSA-VSVAPILTHLQKQCATPLPVLRHVADAMAADMRA 63
Query: 64 GLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQ 123
GL VDGG +LKMILSYVD PTGNE+GLFYALDLGGTNFRVLRVQLGG++ERV ATEFEQ
Sbjct: 64 GLAVDGGSDLKMILSYVDTFPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFEQ 123
Query: 124 VSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSG 183
V+IPQELM GTSEELFDFIA GLA FA+KE GKFHLP GR+REIGFTFSFPVKQTSIDSG
Sbjct: 124 VTIPQELMFGTSEELFDFIACGLANFAKKEGGKFHLPSGRKREIGFTFSFPVKQTSIDSG 183
Query: 184 VLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVA 243
+L+KWTKGF+VSGTAG+DVVACLNEAMERQGLDM+VSALVNDTVGTLAGARYWD+DVMVA
Sbjct: 184 ILMKWTKGFAVSGTAGRDVVACLNEAMERQGLDMQVSALVNDTVGTLAGARYWDDDVMVA 243
Query: 244 VILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINP 303
VILGTGTNACYVE+ D IPKLQG S SGRTII+TEWGAFS GLPLTEFDRDMDAASINP
Sbjct: 244 VILGTGTNACYVERTDVIPKLQGQMSSSGRTIISTEWGAFSNGLPLTEFDRDMDAASINP 303
Query: 304 GEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSE 363
GEQI+EKTISGMYLGEIVRRVLLKMAE GALFG V EKLS PF+LRTP ICAMQQD S+
Sbjct: 304 GEQIFEKTISGMYLGEIVRRVLLKMAEAGALFGEYVSEKLSTPFILRTPDICAMQQDNSD 363
Query: 364 DLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIF 423
L AVG+ LYDVAGV+S L RK+V+EVCDTIVKRGGRLAGAGIV ILQK++EDS IF
Sbjct: 364 HLDAVGAILYDVAGVKSDLSVRKMVVEVCDTIVKRGGRLAGAGIVGILQKMEEDSKDLIF 423
Query: 424 GKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANS 483
GKRTVVAMDGGLYE+Y QYRRY+ EAVTELLG E+SKNVVIEH+KDGSGIGAALLA++NS
Sbjct: 424 GKRTVVAMDGGLYENYPQYRRYLKEAVTELLGLEMSKNVVIEHSKDGSGIGAALLAASNS 483
Query: 484 KF 485
K+
Sbjct: 484 KY 485
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|339756003|gb|AEJ95927.1| HXK2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/482 (81%), Positives = 430/482 (89%), Gaps = 1/482 (0%)
Query: 4 AVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRA 63
AVGS +S +P PR M VRS+ VSVAPILT LQK+CA PLPVLR+VADAM ADMRA
Sbjct: 5 AVGSFWLSPSPGKLPRPRMVVRSSA-VSVAPILTHLQKQCATPLPVLRHVADAMAADMRA 63
Query: 64 GLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQ 123
GL VDGG +LKMILSYVD PTGNE+GLFYALDLGGTNFRVLRVQLGG++ERV ATEFEQ
Sbjct: 64 GLAVDGGSDLKMILSYVDTFPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFEQ 123
Query: 124 VSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSG 183
V+IPQELM GTSEELFDFIA GLA FA+KE GKFHLP GR+REIGFTFSFPVKQTSIDSG
Sbjct: 124 VTIPQELMFGTSEELFDFIACGLANFAKKEGGKFHLPSGRKREIGFTFSFPVKQTSIDSG 183
Query: 184 VLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVA 243
+L+KWTKGF+VSGTAG+DVVACLNEAMERQGLDM+VSALVNDTVGTLAGARYWD+DVMVA
Sbjct: 184 ILMKWTKGFAVSGTAGRDVVACLNEAMERQGLDMQVSALVNDTVGTLAGARYWDDDVMVA 243
Query: 244 VILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINP 303
VILGTGTNACYVE+ D IPKLQG S SGRTII+TEWGAFS GLPLTEFDRDMDAASINP
Sbjct: 244 VILGTGTNACYVERTDVIPKLQGQMSSSGRTIISTEWGAFSNGLPLTEFDRDMDAASINP 303
Query: 304 GEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSE 363
GEQI+EKTISGMYLGEIVRRVLLKMAE GALFG V E+LS PF+LRTP ICAM QD S+
Sbjct: 304 GEQIFEKTISGMYLGEIVRRVLLKMAEAGALFGEYVSERLSTPFILRTPDICAMHQDNSD 363
Query: 364 DLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIF 423
L AVG+ LYDVAGV+S L RK V+EVCDTIVKRGGRLAGAGIV ILQK++EDS IF
Sbjct: 364 HLDAVGAILYDVAGVKSDLSVRKTVVEVCDTIVKRGGRLAGAGIVGILQKMEEDSKDLIF 423
Query: 424 GKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANS 483
GKRTVVAMDGGLYE+Y QYRRY+ EAVTELLG E+SKNVVIEH+KDGSGIGAALLA++NS
Sbjct: 424 GKRTVVAMDGGLYENYPQYRRYLKEAVTELLGLEMSKNVVIEHSKDGSGIGAALLAASNS 483
Query: 484 KF 485
K+
Sbjct: 484 KY 485
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350539587|ref|NP_001234717.1| plastidic hexokinase [Solanum lycopersicum] gi|67003902|gb|AAY60842.1| plastidic hexokinase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/491 (79%), Positives = 429/491 (87%), Gaps = 5/491 (1%)
Query: 3 PAVGSLCISRTPR---GGPRFTM-AVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMT 58
PAV S +SR+P PR + AVRS ++ VAPILTKLQK+CA PLPVLR+VADAM
Sbjct: 8 PAVRSFHVSRSPHKTISRPRVIISAVRSTDSLGVAPILTKLQKDCATPLPVLRHVADAMA 67
Query: 59 ADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQA 118
DMRAGL VDGG +LKMILSYVD LPTGNE+GLFYALDLGGTNFRVLRVQLGG+EERV A
Sbjct: 68 DDMRAGLAVDGGSDLKMILSYVDTLPTGNEKGLFYALDLGGTNFRVLRVQLGGKEERVVA 127
Query: 119 TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQT 178
TEFEQVSIPQELM TSEELFDFIA+ L KFA+KE G F L QGR REIGFTFSFPVKQT
Sbjct: 128 TEFEQVSIPQELMFATSEELFDFIASALGKFAQKEGGNFELQQGRTREIGFTFSFPVKQT 187
Query: 179 SIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238
SI +G+LIKWTKGF+VSGTAGKDVVACLNEAMER+G+DM+VSALVNDTVGTLAGARYWD+
Sbjct: 188 SIRTGILIKWTKGFAVSGTAGKDVVACLNEAMERRGMDMQVSALVNDTVGTLAGARYWDD 247
Query: 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDA 298
D MVAVILGTGTNACYVE++DAIPKL S S TI+NTEWGAFS GLPLTEFDR+MDA
Sbjct: 248 DAMVAVILGTGTNACYVERVDAIPKLAKRMSKSPITIVNTEWGAFSNGLPLTEFDREMDA 307
Query: 299 ASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNS-VPEKLSMPFVLRTPHICAM 357
SINPGEQI+EKTISGMYLGEIVRRVL+KMA+ G LFG+S VPEKL PFVLRTP ICAM
Sbjct: 308 ESINPGEQIFEKTISGMYLGEIVRRVLVKMAKVGGLFGSSYVPEKLVTPFVLRTPDICAM 367
Query: 358 QQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDED 417
QQD S DL+AV S LYDVAGV+S L ARK V+++CDTI KRGGRLAGAGIV ILQK++ED
Sbjct: 368 QQDTSIDLEAVESVLYDVAGVKSDLSARKTVVDICDTIAKRGGRLAGAGIVGILQKMEED 427
Query: 418 SNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAAL 477
S G IFGKRTVVAMDGGLYEHY QYR Y+ EAVTELLG+EISKNVVIEH+KDGSGIGAAL
Sbjct: 428 SKGLIFGKRTVVAMDGGLYEHYPQYRGYLQEAVTELLGSEISKNVVIEHSKDGSGIGAAL 487
Query: 478 LASANSKFDHD 488
LA+ANSK++HD
Sbjct: 488 LAAANSKYEHD 498
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18026821|gb|AAL55635.1|AF118134_1 hexokinase-related protein 1 [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/492 (78%), Positives = 428/492 (86%), Gaps = 5/492 (1%)
Query: 3 PAVGSLCISRTPRGG---PRFTM-AVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMT 58
PAV S +SR+P PR M AVRS+ ++ VAPILTKLQK+CA PLPVLR+VADAM
Sbjct: 8 PAVRSFHVSRSPHKTIYRPRVIMSAVRSSDSLGVAPILTKLQKDCATPLPVLRHVADAMA 67
Query: 59 ADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQA 118
DMRAGL VDGG +LKMILSYVD LPTGNE+GLFYALDLGGTNFRVLRVQLGG+EERV A
Sbjct: 68 DDMRAGLAVDGGSDLKMILSYVDTLPTGNEKGLFYALDLGGTNFRVLRVQLGGKEERVVA 127
Query: 119 TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQT 178
TEFEQVSIP ELM TSEELFDFIA+ L KFA+KE G F L QGR REIGFTFSFPVKQT
Sbjct: 128 TEFEQVSIPPELMFATSEELFDFIASALGKFAQKEGGNFELQQGRTREIGFTFSFPVKQT 187
Query: 179 SIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238
SI +G+LIKWTKGF+VSGTAGKDVVACLNEAMER+G+DM+VSALVNDTVGTLAGARYWD+
Sbjct: 188 SIRTGILIKWTKGFAVSGTAGKDVVACLNEAMERRGMDMQVSALVNDTVGTLAGARYWDD 247
Query: 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDA 298
D MVAVILGTGTNACYVE++DAIPKL S S TI+NTEWGAFS GLPLTEFDR+MDA
Sbjct: 248 DAMVAVILGTGTNACYVERVDAIPKLTKRMSKSPITIVNTEWGAFSNGLPLTEFDREMDA 307
Query: 299 ASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNS-VPEKLSMPFVLRTPHICAM 357
SINPGEQI+EKTISGMYLGEIVRRVL+KM++ G LFG S VPEKL PFVLRTP ICAM
Sbjct: 308 ESINPGEQIFEKTISGMYLGEIVRRVLVKMSKVGGLFGGSYVPEKLVTPFVLRTPDICAM 367
Query: 358 QQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDED 417
QQD S DL+AV S LYDVAGV+S L ARK V+++CDTI KRGGRLAGAGIV ILQK++ED
Sbjct: 368 QQDTSRDLEAVESVLYDVAGVKSDLSARKTVVDICDTIAKRGGRLAGAGIVGILQKMEED 427
Query: 418 SNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAAL 477
S G IFGKR VVAMDGGLYEHY QYR Y+ EAVTELLG+EISKNVVIEH+KDGSGIGAAL
Sbjct: 428 SKGLIFGKRAVVAMDGGLYEHYPQYRGYLQEAVTELLGSEISKNVVIEHSKDGSGIGAAL 487
Query: 478 LASANSKFDHDY 489
LA+ANSK++HDY
Sbjct: 488 LAAANSKYEHDY 499
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75291596|sp|Q6Q8A5.1|HXK2_TOBAC RecName: Full=Hexokinase-2, chloroplastic; AltName: Full=NtHxK2; Flags: Precursor gi|45387405|gb|AAS60193.1| hexokinase 2 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/492 (78%), Positives = 426/492 (86%), Gaps = 5/492 (1%)
Query: 3 PAVGSLCISRTPR---GGPRFTMA-VRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMT 58
PA S ISR+P PR +A VRS V+++VAPILTKLQK+CA PLPVLR+VADAM
Sbjct: 8 PAGRSFHISRSPYKKISKPRVIIAAVRSGVSLAVAPILTKLQKDCATPLPVLRHVADAMA 67
Query: 59 ADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQA 118
DMRAGL VDGG +LKMILSY+D LPTGNE+GLFYALDLGGTNFRVLRVQLGG+EERV A
Sbjct: 68 VDMRAGLAVDGGSDLKMILSYIDTLPTGNEKGLFYALDLGGTNFRVLRVQLGGKEERVIA 127
Query: 119 TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQT 178
TEFEQVSIPQELM TSEELFDFIA+ L KF++ E GKF + QGR REIGFTFSFPVKQT
Sbjct: 128 TEFEQVSIPQELMFATSEELFDFIASELGKFSQSEGGKFEMQQGRTREIGFTFSFPVKQT 187
Query: 179 SIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238
S+ SG+LIKWTKGF+VSGTAGKDVVACLNEAMERQGL M+VSALVNDTV TLAGARYWD
Sbjct: 188 SVKSGILIKWTKGFAVSGTAGKDVVACLNEAMERQGLGMQVSALVNDTVATLAGARYWDN 247
Query: 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDA 298
DVMVAVILGTGTNACYVE++DAIPKL S S TI+NTEWGAFS GLPLTEFDR+MDA
Sbjct: 248 DVMVAVILGTGTNACYVERVDAIPKLPQRMSNSPETIVNTEWGAFSNGLPLTEFDREMDA 307
Query: 299 ASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNS-VPEKLSMPFVLRTPHICAM 357
SINPGEQI+EKTISGMYLGEIVRRVL+KMA+ G LFG VPEKL PFVLRTP ICAM
Sbjct: 308 ESINPGEQIFEKTISGMYLGEIVRRVLVKMAKVGGLFGGGYVPEKLVTPFVLRTPDICAM 367
Query: 358 QQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDED 417
QQD S DL+AV S LYD+AGV+S L ARK V+++CDTI RGGRLAGAGIV ILQK++ED
Sbjct: 368 QQDTSRDLEAVESVLYDIAGVKSDLSARKTVVDICDTIANRGGRLAGAGIVGILQKMEED 427
Query: 418 SNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAAL 477
S G IFGKRTVVAMDGGLYEHY QYR Y+ EAVTELLG+EISKNVVIEH+KDGSGIGAAL
Sbjct: 428 SKGVIFGKRTVVAMDGGLYEHYPQYREYLQEAVTELLGSEISKNVVIEHSKDGSGIGAAL 487
Query: 478 LASANSKFDHDY 489
LA+ANSK++HDY
Sbjct: 488 LAAANSKYEHDY 499
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449437210|ref|XP_004136385.1| PREDICTED: hexokinase-2, chloroplastic-like [Cucumis sativus] gi|449505750|ref|XP_004162558.1| PREDICTED: hexokinase-2, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/484 (75%), Positives = 410/484 (84%), Gaps = 4/484 (0%)
Query: 4 AVGSLCISRTPR--GGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADM 61
AVGSL R+P PRFTMAV S VSV+PILTK QK+C PLPVLR+VAD+M DM
Sbjct: 5 AVGSLPPLRSPTWIARPRFTMAVGSKA-VSVSPILTKFQKDCDTPLPVLRHVADSMANDM 63
Query: 62 RAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEF 121
RAGL VDGG +LKMILSYVD LP+GNE GLFYALDLGGTNFRVLRVQLGG+EERV ATEF
Sbjct: 64 RAGLAVDGGSDLKMILSYVDTLPSGNEEGLFYALDLGGTNFRVLRVQLGGKEERVIATEF 123
Query: 122 EQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSID 181
EQVSIPQ LM TS+ELFDFIA+GL KF E E +FHL GR+RE GFTFSFPVKQ SID
Sbjct: 124 EQVSIPQHLMFATSQELFDFIASGLEKFVESEGDRFHLSPGRKRETGFTFSFPVKQISID 183
Query: 182 SGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVM 241
SG+LIKWTKGF+VSG AGKDVVACLNEAMER+GLDMRVSALVNDTVGTLAGARY+D+DV+
Sbjct: 184 SGILIKWTKGFAVSGVAGKDVVACLNEAMERRGLDMRVSALVNDTVGTLAGARYYDDDVV 243
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASI 301
AVILGTGTNACY+E+ +AIPKLQG S SG+TI+NTEWGA+S GLPL+ FDR+MDAASI
Sbjct: 244 AAVILGTGTNACYIERKNAIPKLQGQGSSSGKTIVNTEWGAYSNGLPLSVFDREMDAASI 303
Query: 302 NPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDY 361
NPGEQI+EKTI+GMYLGEI RRVLL MAE LFG S+PEKLS F+L TP +CAM QD
Sbjct: 304 NPGEQIFEKTIAGMYLGEIARRVLLAMAEFSPLFGKSIPEKLSRQFILSTPDLCAMHQDV 363
Query: 362 SEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421
S DLQAVGS LY+V GVES L ARK+V+EVCDTI KRGGRLAGAGIV IL+KI ED
Sbjct: 364 SNDLQAVGSILYNVFGVESDLSARKIVVEVCDTIAKRGGRLAGAGIVGILKKI-EDFEEV 422
Query: 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASA 481
GKR VVAMDGGLYE+Y QYR+Y+ E VTELLGTE++KNV IEHTKDGSGIGAALLA++
Sbjct: 423 KAGKRRVVAMDGGLYENYPQYRKYLKEGVTELLGTELAKNVAIEHTKDGSGIGAALLAAS 482
Query: 482 NSKF 485
NS +
Sbjct: 483 NSIY 486
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564363|ref|XP_003550424.1| PREDICTED: hexokinase-2, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/489 (73%), Positives = 418/489 (85%), Gaps = 7/489 (1%)
Query: 4 AVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRA 63
AVGS C+SR+ R T+A+RS V+V+ ILTKL+ ECA PLP+L+ VA+ M++DMRA
Sbjct: 14 AVGS-CLSRSRR--RCLTVALRSKVSVTPTRILTKLKHECATPLPLLQQVANNMSSDMRA 70
Query: 64 GLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEF 121
GL + G L MI SYV+ LPTGNE+GLFYALDLGGTNFRVLRVQLGG++ERV ATEF
Sbjct: 71 GLAAEAGPGPGLPMIPSYVENLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEF 130
Query: 122 EQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSID 181
+QVSIP +LM TS+ELFDFIA+GLAKFA KE G+FH+ G++ EIGFTFSFPVKQ SID
Sbjct: 131 DQVSIPHQLMFATSQELFDFIASGLAKFASKEDGRFHISPGKKGEIGFTFSFPVKQASID 190
Query: 182 SGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVM 241
SG+LIKWTKGF+VSGTAG+DVVACLNEAMERQG+DMRVSALVNDTV TLAGA YWD DV+
Sbjct: 191 SGILIKWTKGFAVSGTAGRDVVACLNEAMERQGIDMRVSALVNDTVATLAGAEYWDNDVV 250
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASI 301
VAVILGTGTNACYVEQ+ AIPKLQG+ S SG+ II+TEWGAFS GLPLT+ DR+MDAASI
Sbjct: 251 VAVILGTGTNACYVEQISAIPKLQGHVSSSGKMIISTEWGAFSNGLPLTKIDREMDAASI 310
Query: 302 NPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDY 361
NPGEQI+EKTISGMYLGEIVRRVLL+MAEEG LFG SVP+KLS PF+L TP +CAMQQD
Sbjct: 311 NPGEQIFEKTISGMYLGEIVRRVLLEMAEEGGLFGKSVPQKLSTPFILGTPDLCAMQQDS 370
Query: 362 SEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421
S DL AVGS LYD AGVES+L RK V+EVC+TIVKRGG LAGAGIV ILQK++ED G
Sbjct: 371 SGDLHAVGSLLYDKAGVESNLSERKTVLEVCETIVKRGGSLAGAGIVGILQKMEEDQRGL 430
Query: 422 IF--GKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLA 479
+F GKR+VVA+DGGLYE+Y QYR Y+ ++VTELLGTE S NVVIEHTKDGSGIGAALLA
Sbjct: 431 VFGNGKRSVVAIDGGLYENYPQYRAYLQDSVTELLGTEKSNNVVIEHTKDGSGIGAALLA 490
Query: 480 SANSKFDHD 488
++NS ++ D
Sbjct: 491 ASNSMYNQD 499
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302142655|emb|CBI19858.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/411 (84%), Positives = 377/411 (91%)
Query: 75 MILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGT 134
MILSYVD PTGNE+GLFYALDLGGTNFRVLRVQLGG++ERV ATEFEQV+IPQELM GT
Sbjct: 1 MILSYVDTFPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFEQVTIPQELMFGT 60
Query: 135 SEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSV 194
SEELFDFIA GLA FA+KE GKFHLP GR+REIGFTFSFPVKQTSIDSG+L+KWTKGF+V
Sbjct: 61 SEELFDFIACGLANFAKKEGGKFHLPSGRKREIGFTFSFPVKQTSIDSGILMKWTKGFAV 120
Query: 195 SGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACY 254
SGTAG+DVVACLNEAMERQGLDM+VSALVNDTVGTLAGARYWD+DVMVAVILGTGTNACY
Sbjct: 121 SGTAGRDVVACLNEAMERQGLDMQVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACY 180
Query: 255 VEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISG 314
VE+ D IPKLQG S SGRTII+TEWGAFS GLPLTEFDRDMDAASINPGEQI+EKTISG
Sbjct: 181 VERTDVIPKLQGQMSSSGRTIISTEWGAFSNGLPLTEFDRDMDAASINPGEQIFEKTISG 240
Query: 315 MYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYD 374
MYLGEIVRRVLLKMAE GALFG V EKLS PF+LRTP ICAMQQD S+ L AVG+ LYD
Sbjct: 241 MYLGEIVRRVLLKMAEAGALFGEYVSEKLSTPFILRTPDICAMQQDNSDHLDAVGAILYD 300
Query: 375 VAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGG 434
VAGV+S L RK+V+EVCDTIVKRGGRLAGAGIV ILQK++EDS IFGKRTVVAMDGG
Sbjct: 301 VAGVKSDLSVRKMVVEVCDTIVKRGGRLAGAGIVGILQKMEEDSKDLIFGKRTVVAMDGG 360
Query: 435 LYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKF 485
LYE+Y QYRRY+ EAVTELLG E+SKNVVIEH+KDGSGIGAALLA++NSK+
Sbjct: 361 LYENYPQYRRYLKEAVTELLGLEMSKNVVIEHSKDGSGIGAALLAASNSKY 411
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 489 | ||||||
| TAIR|locus:2202410 | 493 | HXK3 "hexokinase 3" [Arabidops | 0.979 | 0.971 | 0.665 | 1.3e-164 | |
| TAIR|locus:2119931 | 496 | HXK1 "hexokinase 1" [Arabidops | 0.934 | 0.921 | 0.586 | 9.2e-139 | |
| TAIR|locus:2051920 | 502 | HXK2 "hexokinase 2" [Arabidops | 0.928 | 0.904 | 0.576 | 6.2e-133 | |
| TAIR|locus:2008031 | 498 | HKL1 "AT1G50460" [Arabidopsis | 0.893 | 0.877 | 0.502 | 2e-111 | |
| TAIR|locus:2087590 | 502 | ATHXK4 "AT3G20040" [Arabidopsi | 0.893 | 0.870 | 0.480 | 2.6e-111 | |
| TAIR|locus:2137564 | 493 | HKL3 "AT4G37840" [Arabidopsis | 0.869 | 0.862 | 0.427 | 2.2e-89 | |
| UNIPROTKB|F1MIM3 | 917 | HKDC1 "Uncharacterized protein | 0.801 | 0.427 | 0.414 | 9.6e-73 | |
| UNIPROTKB|J9JHN0 | 917 | HKDC1 "Uncharacterized protein | 0.801 | 0.427 | 0.406 | 8.6e-72 | |
| UNIPROTKB|F1SUF3 | 951 | HKDC1 "Uncharacterized protein | 0.801 | 0.412 | 0.404 | 1.1e-71 | |
| UNIPROTKB|Q2TB90 | 917 | HKDC1 "Putative hexokinase HKD | 0.801 | 0.427 | 0.406 | 2.9e-71 |
| TAIR|locus:2202410 HXK3 "hexokinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1602 (569.0 bits), Expect = 1.3e-164, P = 1.3e-164
Identities = 321/482 (66%), Positives = 373/482 (77%)
Query: 3 PAVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMR 62
PA+GS S PR AVRSN + S PILTK QK+CA P P LRNVA+A+ DMR
Sbjct: 12 PALGSFTFSSRPRSNYIVMSAVRSN-SASTCPILTKFQKDCATPTPYLRNVANAIADDMR 70
Query: 63 AGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFE 122
GL V+GGG+L+MIL++VDALP+GNE GLFYALDLGGTNFRV VQLGG++ERV ATE E
Sbjct: 71 DGLAVEGGGDLEMILTFVDALPSGNEEGLFYALDLGGTNFRVRSVQLGGKKERVLATESE 130
Query: 123 QVSIPQELMCGTSEELFDFIATGLAKFAEKEA-GKFHLPQGRQREIGFTFSFPVKQTSID 181
Q+SI Q+LM GTSEELF FIA+ LA F KE G+F L +GR+RE+GFTFSFPVKQTSID
Sbjct: 131 QISISQKLMIGTSEELFGFIASKLANFVAKEKPGRFLLEEGRKRELGFTFSFPVKQTSID 190
Query: 182 SGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVM 241
SG L KWTKGF VSG GK+VVACLNEAME GLDMRVSALVND VGTLAGARYWDEDVM
Sbjct: 191 SGTLSKWTKGFKVSGMEGKNVVACLNEAMEAHGLDMRVSALVNDGVGTLAGARYWDEDVM 250
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASI 301
V VILGTGTNACYVEQ AIPKL+ +KS SG TIINTEWG FSK LP T FD +MD S+
Sbjct: 251 VGVILGTGTNACYVEQKHAIPKLR-SKSSSGTTIINTEWGGFSKILPQTIFDLEMDETSL 309
Query: 302 NPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDY 361
NPGE +YEK ISGMYLGEIVRRVLL M E LFG+ P KLS P LRT H+C MQ+D
Sbjct: 310 NPGEHLYEKMISGMYLGEIVRRVLLHMCETSDLFGHFAPAKLSTPLALRTEHLCKMQEDN 369
Query: 362 SEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421
++DL+ VGS LYD VE+++ AR+ V+EVCDT+VKRGGRLAGAGIV+IL+KI++D+
Sbjct: 370 TDDLRDVGSILYDFLDVEANMNARRRVVEVCDTVVKRGGRLAGAGIVAILEKIEKDTKRM 429
Query: 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDXXXXXXXXXXXX 481
GKRTVVAMDG LYE Y QYR+Y+ +A+ ELLG +++ +V I+HTKD
Sbjct: 430 GSGKRTVVAMDGALYEKYPQYRQYMQDALVELLGHKLASHVAIKHTKDVSGLGAALLAAT 489
Query: 482 NS 483
NS
Sbjct: 490 NS 491
|
|
| TAIR|locus:2119931 HXK1 "hexokinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1358 (483.1 bits), Expect = 9.2e-139, P = 9.2e-139
Identities = 269/459 (58%), Positives = 334/459 (72%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL 91
V IL +++CA P+ LR VADAMT +M AGL DGG +LKM++SYVD LP+G+E+GL
Sbjct: 37 VLAILKAFEEDCATPISKLRQVADAMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGL 96
Query: 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE 151
FYALDLGGTNFRV+RV LGG++ERV EFE+VSIP LM G S+ELF+FIA LAKF
Sbjct: 97 FYALDLGGTNFRVMRVLLGGKQERVVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVA 156
Query: 152 KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME 211
E FHLP+GRQRE+GFTFSFPVKQTS+ SG LIKWTKGFS+ G+DVV LN+A+E
Sbjct: 157 TECEDFHLPEGRQRELGFTFSFPVKQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALE 216
Query: 212 RQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPS 271
R GLDMR++ALVNDTVGTLAG RY++ DV+ AVILGTGTNA YVE+ AIPK G S
Sbjct: 217 RVGLDMRIAALVNDTVGTLAGGRYYNPDVVAAVILGTGTNAAYVERATAIPKWHGLLPKS 276
Query: 272 GRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAE 330
G +IN EWG F S LPLTEFD +D S+NPGEQI EK ISGMYLGEI+RRVLLKMAE
Sbjct: 277 GEMVINMEWGNFRSSHLPLTEFDHTLDFESLNPGEQILEKIISGMYLGEILRRVLLKMAE 336
Query: 331 EGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVES-SLKARKVVI 389
+ A FG++VP KL +PF++RTPH+ AM D S DL+ VGS + D+ V + SLK RKVVI
Sbjct: 337 DAAFFGDTVPSKLRIPFIIRTPHMSAMHNDTSPDLKIVGSKIKDILEVPTTSLKMRKVVI 396
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
+C+ I RG RL+ AGI IL+K+ D+ +++V+AMDGGL+EHYTQ+ + +
Sbjct: 397 SLCNIIATRGARLSAAGIYGILKKLGRDTTKDEEVQKSVIAMDGGLFEHYTQFSECMESS 456
Query: 450 VTELLGTEISKNVVIEHTKDXXXXXXXXXXXXNSKFDHD 488
+ ELLG E S +V + H+ D +S + D
Sbjct: 457 LKELLGDEASGSVEVTHSNDGSGIGAALLAASHSLYLED 495
|
|
| TAIR|locus:2051920 HXK2 "hexokinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 263/456 (57%), Positives = 324/456 (71%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL 91
V IL +++CA P+ LR VADAMT +M AGL +GG +LKM++SYVD LP+G+E G
Sbjct: 37 VIEILKAFEEDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGF 96
Query: 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE 151
FYALDLGGTNFRV+RV LGG+ +RV EF++ SIP LM G S ELFDFI LAKF
Sbjct: 97 FYALDLGGTNFRVMRVLLGGKHDRVVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVA 156
Query: 152 KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME 211
E FHLP GRQRE+GFTFSFPVKQ S+ SG LI WTKGFS+ T KDVV L +AME
Sbjct: 157 TEGEDFHLPPGRQRELGFTFSFPVKQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAME 216
Query: 212 RQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPS 271
R GLDM V+ALVNDT+GTLAG RY + DV+VAVILGTGTNA YVE+ AIPK G S
Sbjct: 217 RVGLDMLVAALVNDTIGTLAGGRYTNPDVVVAVILGTGTNAAYVERAHAIPKWHGLLPKS 276
Query: 272 GRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAE 330
G +IN EWG F S LPLTE+D +D S+NPGEQI EK ISGMYLGEI+RRVLLKMAE
Sbjct: 277 GEMVINMEWGNFRSSHLPLTEYDHSLDVDSLNPGEQILEKIISGMYLGEILRRVLLKMAE 336
Query: 331 EGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVI 389
E A FG+ VP KL +PF++RTP++ AM D S DL+ VGS L D+ V+ SSLK RKVVI
Sbjct: 337 EAAFFGDIVPPKLKIPFIIRTPNMSAMHSDTSPDLKVVGSKLKDILEVQTSSLKMRKVVI 396
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
+C+ I RG RL+ AGI IL+KI D+ +++V+AMDGGL+EHYTQ+ + +
Sbjct: 397 SLCNIIASRGARLSAAGIYGILKKIGRDATKDGEAQKSVIAMDGGLFEHYTQFSESMKSS 456
Query: 450 VTELLGTEISKNVVIEHTKDXXXXXXXXXXXXNSKF 485
+ ELLG E+S++V + + D +S++
Sbjct: 457 LKELLGDEVSESVEVILSNDGSGVGAALLAASHSQY 492
|
|
| TAIR|locus:2008031 HKL1 "AT1G50460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 226/450 (50%), Positives = 301/450 (66%)
Query: 31 SVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERG 90
+V IL +L+ +C P+ LR V DAM +M AGL +GG +LKM+L++VD LPTG E+G
Sbjct: 36 TVVEILKELEDDCDTPVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDDLPTGREKG 95
Query: 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFA 150
+YAL LGGT FR+LRV LG Q + + E+ IP LM TSE LF+F+A L +F
Sbjct: 96 TYYALHLGGTYFRILRVLLGDQRSYLDVQDVERHPIPSHLMNSTSEVLFNFLAFSLERFI 155
Query: 151 EKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAM 210
EKE QG +RE+ FTFSFPVK TSI SGVLIKWTKGF +S G+D+ CL A+
Sbjct: 156 EKEENGSD-SQGVRRELAFTFSFPVKHTSISSGVLIKWTKGFEISEMVGQDIAECLQGAL 214
Query: 211 ERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSP 270
R+GLDM V+ALVNDTVG L+ Y D D +VAV+ GTG+NACY+E+ DAI K QG +
Sbjct: 215 NRRGLDMHVAALVNDTVGALSLGYYHDPDTVVAVVFGTGSNACYLERTDAIIKCQGLLTT 274
Query: 271 SGRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMA 329
SG ++N EWG F S LP T +D D+DA S N + +EK ISGMYLG+IVRRV+L+M+
Sbjct: 275 SGSMVVNMEWGNFWSSHLPRTSYDIDLDAESSNANDMGFEKMISGMYLGDIVRRVILRMS 334
Query: 330 EEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVI 389
E+ +FG P LS P+VLRT + A+ +D + +LQ V L D+ + LK RK+V+
Sbjct: 335 EDSDIFGPISPV-LSEPYVLRTNSVSAIHEDDTPELQEVARILKDIGVSDVPLKVRKLVV 393
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFG----------KRTVVAMDGGLYEHY 439
++CD + +R GRLA AGI IL+KI D +G I KRTVVA++GGLY +Y
Sbjct: 394 KICDVVTRRAGRLAAAGIAGILKKIGRDGSGGITSGRSRSEIQMQKRTVVAVEGGLYMNY 453
Query: 440 TQYRRYVHEAVTELLGTEISKNVVIEHTKD 469
T +R Y+ EA+ E+LG E+S+ VV++ +D
Sbjct: 454 TMFREYMEEALVEILGEEVSQYVVVKAMED 483
|
|
| TAIR|locus:2087590 ATHXK4 "AT3G20040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 214/445 (48%), Positives = 306/445 (68%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL 91
V +L L++ C PL LR + DA+ +M+AGLV +GG +LKM+L++VD LP G+E G
Sbjct: 37 VVGLLKDLEEACETPLGRLRQMVDAIAVEMQAGLVSEGGSKLKMLLTFVDDLPNGSETGT 96
Query: 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE 151
+YAL LGG+ FR+++V LGGQ ++ + E+ SIP LM TSE LFDF+A+ L +F E
Sbjct: 97 YYALHLGGSYFRIIKVHLGGQRSSLEVQDVERHSIPTSLMNSTSEVLFDFLASSLQRFIE 156
Query: 152 KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME 211
KE F L Q +RE+ FTFSFPVKQTSI SGVLIKWTKGF++S AG+D+ CL A+
Sbjct: 157 KEGNDFSLSQPLKRELAFTFSFPVKQTSISSGVLIKWTKGFAISEMAGEDIAECLQGALN 216
Query: 212 RQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPS 271
++GLD+RV+ALVNDTVG L+ + D D + AV+ GTG+NACY+E+ DAI K Q ++ S
Sbjct: 217 KRGLDIRVAALVNDTVGALSFGHFHDPDTIAAVVFGTGSNACYLERTDAIIKCQNPRTTS 276
Query: 272 GRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAE 330
G ++N EWG F S LP T +D ++DA S+N + +EK I GMYLG+IVRRV+L+M++
Sbjct: 277 GSMVVNMEWGNFWSSRLPRTSYDLELDAESMNSNDMGFEKMIGGMYLGDIVRRVILRMSQ 336
Query: 331 EGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIE 390
E +FG + LS PFVLRT + AM +D + +LQ V L D+ E +K RK+V++
Sbjct: 337 ESDIFG-PISSILSTPFVLRTNSVSAMHEDDTSELQEVARILKDLGVSEVPMKVRKLVVK 395
Query: 391 VCDTIVKRGGRLAGAGIVSILQKIDEDSNGA------IFGKRTVVAMDGGLYEHYTQYRR 444
+CD + +R RLA AGI IL+K+ D +G +RTVVA++GGLY +Y +R
Sbjct: 396 ICDVVTRRAARLAAAGIAGILKKVGRDGSGGGRRSDKQIMRRTVVAVEGGLYLNYRMFRE 455
Query: 445 YVHEAVTELLGTEISKNVVIEHTKD 469
Y+ EA+ ++LG +++++VV++ +D
Sbjct: 456 YMDEALRDILGEDVAQHVVVKAMED 480
|
|
| TAIR|locus:2137564 HKL3 "AT4G37840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 187/437 (42%), Positives = 281/437 (64%)
Query: 35 ILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYA 94
IL K +ECA P+ L VADA+ ADM A L + G L M++S+ +LP+G+E+G+ Y
Sbjct: 41 ILRKFARECATPVSKLWAVADALVADMTASLTAECCGSLNMLVSFTGSLPSGDEKGVHYG 100
Query: 95 LDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEA 154
++L G +LR LGG EE + + ++ IP +++ G+ +EL DFI+ L KF
Sbjct: 101 VNLRGKELLLLRGTLGGNEEPISDVQKHEIPIPDDVLNGSFKELCDFISLELVKFLAMNP 160
Query: 155 GKFHLPQGRQREIGFTFSFPVKQTSIDS-GVLIKWTKGFSVSGTAGKDVVACLNEAMERQ 213
G + +GFT + V+Q S + + + KD+V +NE++E
Sbjct: 161 GG---EAEEVKNLGFTLTRSVEQIGSHSISSIHRKSLANDDDEKVLKDLVNDMNESLETH 217
Query: 214 GLDMRVS-ALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSG 272
GL +R++ ALV++T+G LAG RY+ +D + AV LG GTNA Y+EQ I + +
Sbjct: 218 GLKIRMNTALVDNTIGELAGGRYYHKDTVAAVSLGMGTNAAYIEQAQEISRWKSAIREPQ 277
Query: 273 RTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEE 331
+++TEWG F S LP+TEFD +DA S+NPG +I+EK +SG YLGEIVRRVLLKM+EE
Sbjct: 278 EIVVSTEWGDFRSCHLPITEFDASLDAESLNPGHRIFEKMVSGRYLGEIVRRVLLKMSEE 337
Query: 332 GALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSLKARKVVIE 390
ALFG+++P KL++P++L +P + AM QD SE+ + V L +V G+ +S+L AR+VV+E
Sbjct: 338 SALFGDTLPPKLTIPYILWSPDMAAMHQDISEERETVNKKLKEVFGIMDSTLAAREVVVE 397
Query: 391 VCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAV 450
VCD + +R RLAGAGIV +++K+ G + K ++V ++GGLY+HY +R Y+H +V
Sbjct: 398 VCDVVAERAARLAGAGIVGMIKKL-----GRLEKKMSIVIVEGGLYDHYRVFRNYLHSSV 452
Query: 451 TELLGTEISKNVVIEHT 467
E+LG E+S +VVIEH+
Sbjct: 453 WEMLGDELSDHVVIEHS 469
|
|
| UNIPROTKB|F1MIM3 HKDC1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 171/413 (41%), Positives = 243/413 (58%)
Query: 50 LRNVADAMTADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L ++ A+M+ GL D +KM+ ++V A+P G+E G F +LDLGG+ FRVL+V
Sbjct: 36 LLDIMARFQAEMQKGLGKDTNPTASVKMLPTFVRAIPDGSENGEFLSLDLGGSKFRVLKV 95
Query: 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE-KEAGKFHLPQGRQRE 166
Q+ + +R E + P E++ G ELF+++A LA F + KE + LP
Sbjct: 96 QVSEEGKRNVQMESQFYPTPNEIIRGNGTELFEYVADCLADFMKTKELMQKKLP------ 149
Query: 167 IGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMER-QGLDMRVSALVND 225
+G TFSFP KQT ++ G+L+ WTK F G G DVV+ L AM+R Q LD+ + ALVND
Sbjct: 150 LGLTFSFPCKQTKLEEGILLSWTKKFKARGVQGTDVVSSLTNAMKRHQDLDVDILALVND 209
Query: 226 TVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSK 285
TVGT+ Y D V VI+GTGTNACY+E M I ++G++ GR +NTEWGAF
Sbjct: 210 TVGTMMTCAYDDPYCEVGVIIGTGTNACYMEDMSNIDLVEGDE---GRMCVNTEWGAFGD 266
Query: 286 GLPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPE 341
L TEFDR++D S+NPG+Q++EK ISG+YLGE+VR +LLKMA+ G LFG
Sbjct: 267 DGALEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGELVRLILLKMAKAGLLFGGEKSS 326
Query: 342 KLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401
L + + T H+ AM++ Y E L L D+ G+E S V VC + R
Sbjct: 327 ALHIKGKIETRHVAAMER-YKEGLANTREILTDL-GLEPSDADCIAVQHVCTIVSFRSAN 384
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
L A + +IL ++ E N + RT V +DG LY+ + QY + +H+ V +L+
Sbjct: 385 LCAAALAAILTRLRE--NKKLVRLRTTVGVDGTLYKIHPQYPKRLHKVVRKLV 435
|
|
| UNIPROTKB|J9JHN0 HKDC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 168/413 (40%), Positives = 244/413 (59%)
Query: 50 LRNVADAMTADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L ++ A+M+ GL D +KM+ ++V A+P G+E G F +LDLGG+ FRVL+V
Sbjct: 36 LLDIMARFQAEMQKGLGKDTNPTASVKMLPTFVRAIPDGSENGEFLSLDLGGSKFRVLKV 95
Query: 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167
Q+ + +R E + P E++ G ELFD+IA LA F K G H ++ +
Sbjct: 96 QVSEEGKRNVQMESQFYPTPNEIIRGNGSELFDYIADCLADFM-KTRGLKH----KKFPL 150
Query: 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMER-QGLDMRVSALVNDT 226
G TFSFP +QT ++ G+L+ WTK F G DVV+CL +A+++ + +D+ + LVNDT
Sbjct: 151 GLTFSFPCRQTKLEEGILLSWTKKFKARGVQDTDVVSCLTKAVKKHKDIDVDILTLVNDT 210
Query: 227 VGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG 286
VGT+ Y D V VI+GTGTNACY+E M I ++G++ GR INTEWGAF
Sbjct: 211 VGTMMTCAYDDPYCEVGVIIGTGTNACYMEDMSNIDLVEGDE---GRMCINTEWGAFGDD 267
Query: 287 LPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEK 342
L TEFDR++D S+NPG+Q++EK ISG+YLGE+VR +LLKMA+ G LFG
Sbjct: 268 GTLEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGELVRIILLKMAKAGLLFGGKKSSA 327
Query: 343 LSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIE-VCDTIVKRGGR 401
L + T H+ AM++ Y E L L D+ G+E S +A + ++ VC + R
Sbjct: 328 LHTKGKIETRHVAAMEK-YKEGLANTREILTDL-GLEPS-EADCIAVQHVCTIVSFRSAN 384
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
L A + +IL ++ E N + RT V MDG LY+ + QY + +H+ V L+
Sbjct: 385 LCAAALAAILTRLRE--NKKLERLRTTVGMDGTLYKIHPQYPKRLHKVVRRLV 435
|
|
| UNIPROTKB|F1SUF3 HKDC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 167/413 (40%), Positives = 246/413 (59%)
Query: 50 LRNVADAMTADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L ++ A+M+ GL D +KM+ ++V A+P G+E G F +LDLGG+ FRVL+V
Sbjct: 70 LLDIMARFQAEMQKGLGKDTNPTASVKMLPTFVRAIPDGSENGEFLSLDLGGSKFRVLKV 129
Query: 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167
Q+ + +R E + P E++ G ELF+++A LA F E + L Q ++ +
Sbjct: 130 QVSEEGKRNVQMESQFYPTPNEIIRGNGTELFEYVADCLADFMETKG----LKQ-KKLPL 184
Query: 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMER-QGLDMRVSALVNDT 226
G TFSFP +QT ++ GVL+ WTK F G D+V+ L+ AM + + +D+ + ALVNDT
Sbjct: 185 GLTFSFPCRQTKLEEGVLLSWTKKFKARGVQDTDIVSSLSNAMRKHKDIDVDILALVNDT 244
Query: 227 VGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG 286
VGT+ Y D V VI+GTGTNACY+E M I ++G++ GR INTEWGAF
Sbjct: 245 VGTMMTCAYDDPYCEVGVIIGTGTNACYMEDMSNIDLVEGDE---GRMCINTEWGAFGDD 301
Query: 287 LPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEK 342
L TEFDR++D S+NPG+Q++EK ISG+YLGE+VR +LLKMA+ G LFG
Sbjct: 302 GALEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGELVRLILLKMAKTGLLFGGEKSSA 361
Query: 343 LSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIE-VCDTIVKRGGR 401
L + + T H+ AM++ Y E L L D+ G+E S +A + ++ VC + R
Sbjct: 362 LHIKGKIETRHVAAMER-YKEGLANTREILTDL-GLEPS-EADCIAVQHVCTIVSFRSAN 418
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
L A + +IL ++ E N + RT V MDG LY+ + QY + +H+ V +L+
Sbjct: 419 LCAAALAAILTRLRE--NKKLVRLRTTVGMDGTLYKIHPQYPKRLHKVVRKLV 469
|
|
| UNIPROTKB|Q2TB90 HKDC1 "Putative hexokinase HKDC1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 168/413 (40%), Positives = 244/413 (59%)
Query: 50 LRNVADAMTADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L ++ A+M GL D +KM+ ++V A+P G+E G F +LDLGG+ FRVL+V
Sbjct: 36 LLDIMRRFRAEMEKGLAKDTNPTAAVKMLPTFVRAIPDGSENGEFLSLDLGGSKFRVLKV 95
Query: 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167
Q+ + +R E + P E++ G ELF+++A LA F + + K H ++ +
Sbjct: 96 QVAEEGKRHVQMESQFYPTPNEIIRGNGTELFEYVADCLADFMKTKDLK-H----KKLPL 150
Query: 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMER-QGLDMRVSALVNDT 226
G TFSFP +QT ++ GVL+ WTK F G DVV+ L +AM R + +D+ + ALVNDT
Sbjct: 151 GLTFSFPCRQTKLEEGVLLSWTKKFKARGVQDTDVVSRLTKAMRRHKDMDVDILALVNDT 210
Query: 227 VGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG 286
VGT+ Y D V VI+GTGTNACY+E M I ++G++ GR INTEWGAF
Sbjct: 211 VGTMMTCAYDDPYCEVGVIIGTGTNACYMEDMSNIDLVEGDE---GRMCINTEWGAFGDD 267
Query: 287 LPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEK 342
L TEFDR++D S+NPG+Q++EK ISG+YLGE+VR +LLKMA+ G LFG
Sbjct: 268 GALEDIRTEFDRELDLGSLNPGKQLFEKMISGLYLGELVRLILLKMAKAGLLFGGEKSSA 327
Query: 343 LSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIE-VCDTIVKRGGR 401
L + T H+ AM++ Y E L L D+ G+E S +A + ++ VC + R
Sbjct: 328 LHTKGKIETRHVAAMEK-YKEGLANTREILVDL-GLEPS-EADCIAVQHVCTIVSFRSAN 384
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
L A + +IL ++ E N + RT V MDG LY+ + QY + +H+ V +L+
Sbjct: 385 LCAAALAAILTRLRE--NKKVERLRTTVGMDGTLYKIHPQYPKRLHKVVRKLV 435
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SQ76 | HXK2_SOLTU | 2, ., 7, ., 1, ., 1 | 0.5855 | 0.9284 | 0.9153 | N/A | no |
| O64390 | HXK1_SOLTU | 2, ., 7, ., 1, ., 1 | 0.5076 | 0.9243 | 0.9076 | N/A | no |
| Q9SEK3 | HXK1_SPIOL | 2, ., 7, ., 1, ., 1 | 0.5921 | 0.9284 | 0.9116 | N/A | no |
| Q9SEK2 | HXK1_TOBAC | 2, ., 7, ., 1, ., 1 | 0.5523 | 0.9734 | 0.9577 | N/A | no |
| Q6Q8A5 | HXK2_TOBAC | 2, ., 7, ., 1, ., 1 | 0.7845 | 0.9959 | 0.9759 | N/A | no |
| P04807 | HXKB_YEAST | 2, ., 7, ., 1, ., 1 | 0.3441 | 0.8261 | 0.8312 | yes | no |
| Q9FZG4 | HXKL1_ARATH | 2, ., 7, ., 1, ., 1 | 0.6797 | 0.9836 | 0.9756 | yes | no |
| Q6Z398 | HXK4_ORYSJ | 2, ., 7, ., 1, ., 1 | 0.7505 | 0.9079 | 0.8722 | yes | no |
| Q09756 | HXK1_SCHPO | 2, ., 7, ., 1, ., 1 | 0.3520 | 0.9263 | 0.9359 | yes | no |
| P33284 | HXK_KLULA | 2, ., 7, ., 1, ., 1 | 0.3407 | 0.8548 | 0.8618 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_V1520 | hexokinase/glucokinase (EC-2.7.1.4) (467 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.VIII.2574.1 | glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa) | • | • | • | 0.919 | ||||||
| gw1.II.3030.1 | glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa) | • | • | 0.905 | |||||||
| fgenesh4_pg.C_LG_IV000576 | mannose-6-phosphate isomerase (EC-5.3.1.8) (440 aa) | • | 0.905 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIV0248 | SubName- Full=Putative uncharacterized protein; (247 aa) | • | 0.902 | ||||||||
| estExt_Genewise1_v1.C_17140001 | phosphomannomutase (EC-5.4.2.8) (229 aa) | • | 0.902 | ||||||||
| estExt_fgenesh4_pg.C_LG_XV1054 | phosphoglucomutase (EC-5.4.2.2) (551 aa) | • | • | • | 0.901 | ||||||
| estExt_fgenesh4_pm.C_LG_VIII0571 | phosphoglucomutase (EC-5.4.2.2) (582 aa) | • | • | 0.900 | |||||||
| estExt_fgenesh4_pg.C_LG_X0989 | phosphoglucomutase (EC-5.4.2.2) (582 aa) | • | • | 0.900 | |||||||
| estExt_fgenesh4_pg.C_LG_IX0868 | hypothetical protein (498 aa) | • | • | 0.900 | |||||||
| eugene3.00121193 | phosphoglucomutase (EC-5.4.2.2) (631 aa) | • | • | 0.900 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 489 | |||
| PLN02914 | 490 | PLN02914, PLN02914, hexokinase | 0.0 | |
| PLN02405 | 497 | PLN02405, PLN02405, hexokinase | 0.0 | |
| PLN02362 | 509 | PLN02362, PLN02362, hexokinase | 0.0 | |
| PLN02596 | 490 | PLN02596, PLN02596, hexokinase-like | 1e-168 | |
| COG5026 | 466 | COG5026, COG5026, Hexokinase [Carbohydrate transpo | 1e-108 | |
| PTZ00107 | 464 | PTZ00107, PTZ00107, hexokinase; Provisional | 1e-106 | |
| pfam03727 | 238 | pfam03727, Hexokinase_2, Hexokinase | 1e-71 | |
| pfam00349 | 205 | pfam00349, Hexokinase_1, Hexokinase | 3e-62 | |
| cd00012 | 185 | cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- | 3e-06 |
| >gnl|CDD|178502 PLN02914, PLN02914, hexokinase | Back alignment and domain information |
|---|
Score = 904 bits (2338), Expect = 0.0
Identities = 405/483 (83%), Positives = 439/483 (90%), Gaps = 1/483 (0%)
Query: 3 PAVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMR 62
PA+GS S PR PR MAVRSN VSVAPILTKLQK+CA PLPVLR+VADAM ADMR
Sbjct: 9 PAIGSFTFSSRPRRRPRSRMAVRSNA-VSVAPILTKLQKDCATPLPVLRHVADAMAADMR 67
Query: 63 AGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFE 122
AGL VDGGG+LKMILSYVD+LP+GNE+GLFYALDLGGTNFRVLRVQLGG++ERV ATEFE
Sbjct: 68 AGLAVDGGGDLKMILSYVDSLPSGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFE 127
Query: 123 QVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDS 182
QVSIPQELM GTSEELFDFIA+GLA F KE GKFHLP+GR+REIGFTFSFPVKQTSIDS
Sbjct: 128 QVSIPQELMFGTSEELFDFIASGLANFVAKEGGKFHLPEGRKREIGFTFSFPVKQTSIDS 187
Query: 183 GVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMV 242
G+L+KWTKGF+VSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD+DVMV
Sbjct: 188 GILMKWTKGFAVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDDDVMV 247
Query: 243 AVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASIN 302
AVILGTGTNACYVE+ DAIPKLQG KS SGRTIINTEWGAFS GLPLTEFDR+MDAASIN
Sbjct: 248 AVILGTGTNACYVERTDAIPKLQGQKSSSGRTIINTEWGAFSDGLPLTEFDREMDAASIN 307
Query: 303 PGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYS 362
PGEQI+EKTISGMYLGEIVRRVLLKMAE LFG+ VPEKLS PF LRTPH+CAMQQD S
Sbjct: 308 PGEQIFEKTISGMYLGEIVRRVLLKMAETSDLFGHFVPEKLSTPFALRTPHLCAMQQDNS 367
Query: 363 EDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAI 422
+DLQAVGS LYDV GVE+SL AR+ V+EVCDTIVKRGGRLAGAGIV IL+K++EDS G I
Sbjct: 368 DDLQAVGSILYDVLGVEASLSARRRVVEVCDTIVKRGGRLAGAGIVGILEKMEEDSKGMI 427
Query: 423 FGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASAN 482
FGKRTVVAMDGGLYE Y QYRRY+ +AVTELLG E+SKN+ IEHTKDGSGIGAALLA+ N
Sbjct: 428 FGKRTVVAMDGGLYEKYPQYRRYMQDAVTELLGLELSKNIAIEHTKDGSGIGAALLAATN 487
Query: 483 SKF 485
SK+
Sbjct: 488 SKY 490
|
Length = 490 |
| >gnl|CDD|215226 PLN02405, PLN02405, hexokinase | Back alignment and domain information |
|---|
Score = 641 bits (1655), Expect = 0.0
Identities = 277/463 (59%), Positives = 347/463 (74%), Gaps = 2/463 (0%)
Query: 25 RSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALP 84
S IL + +++CA P+ LR VADAMT +M AGL +GG +LKM++SYVD LP
Sbjct: 30 SSGKWARAMEILKEFEEDCATPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLP 89
Query: 85 TGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIAT 144
+G+E+GLFYALDLGGTNFRVLRV LGG++ RV EFE+VSIP LM G+S+ LFDFIA
Sbjct: 90 SGDEKGLFYALDLGGTNFRVLRVLLGGKDGRVVKQEFEEVSIPPHLMTGSSDALFDFIAA 149
Query: 145 GLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVA 204
LAKF E FHLP GRQRE+GFTFSFPVKQTSI SG LIKWTKGFS+ G+DVV
Sbjct: 150 ALAKFVATEGEDFHLPPGRQRELGFTFSFPVKQTSISSGTLIKWTKGFSIDDAVGQDVVG 209
Query: 205 CLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKL 264
L +AMER GLDMRVSALVNDT+GTLAG RY++ DV+ AVILGTGTNA YVE+ AIPK
Sbjct: 210 ELTKAMERVGLDMRVSALVNDTIGTLAGGRYYNPDVVAAVILGTGTNAAYVERAQAIPKW 269
Query: 265 QGNKSPSGRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRR 323
G SG +IN EWG F S LPLTE+D +D S+NPGEQI+EK ISGMYLGEI+RR
Sbjct: 270 HGLLPKSGEMVINMEWGNFRSSHLPLTEYDHALDVESLNPGEQIFEKIISGMYLGEILRR 329
Query: 324 VLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSL 382
VLLKMAEE A FG++VP KL +PF+LRTP + AM D S DL+ VGS L D+ + +SL
Sbjct: 330 VLLKMAEEAAFFGDTVPPKLKIPFILRTPDMSAMHHDTSPDLKVVGSKLKDILEIPNTSL 389
Query: 383 KARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQY 442
K RKVV+E+C+ + RG RL+ AGI IL+K+ D+ +++V+AMDGGL+EHYT++
Sbjct: 390 KMRKVVVELCNIVATRGARLSAAGIYGILKKLGRDTVKDGEKQKSVIAMDGGLFEHYTEF 449
Query: 443 RRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKF 485
+ + + ELLG E+S+++ +EH+ DGSGIGAALLA+++S +
Sbjct: 450 SKCMESTLKELLGEEVSESIEVEHSNDGSGIGAALLAASHSLY 492
|
Length = 497 |
| >gnl|CDD|215206 PLN02362, PLN02362, hexokinase | Back alignment and domain information |
|---|
Score = 540 bits (1392), Expect = 0.0
Identities = 256/469 (54%), Positives = 335/469 (71%), Gaps = 13/469 (2%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL 91
V +L +L++ C P+ LR V DAM +M AGL +GG +LKM+L++VD LPTG+E G
Sbjct: 37 VVGVLKELEEACETPVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDDLPTGSEIGT 96
Query: 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE 151
+YALDLGGTNFRVLRVQLGGQ + + + E+ IPQ LM TSE LFDFIA+ L +F E
Sbjct: 97 YYALDLGGTNFRVLRVQLGGQRSSILSQDVERHPIPQHLMNSTSEVLFDFIASSLKQFVE 156
Query: 152 KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME 211
KE Q R+RE+GFTFSFPVKQTSI SG+LIKWTKGF++S GKDV CL A+
Sbjct: 157 KEENGSEFSQVRRRELGFTFSFPVKQTSISSGILIKWTKGFAISDMVGKDVAECLQGALN 216
Query: 212 RQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPS 271
R+GLDMRV+ALVNDTVGTLA Y D D + AVI+GTGTNACY+E+ DAI K QG + S
Sbjct: 217 RRGLDMRVAALVNDTVGTLALGHYHDPDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTS 276
Query: 272 GRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAE 330
G ++N EWG F S LP T +D D+DA S NP +Q +EK ISGMYLG+IVRRV+L+M++
Sbjct: 277 GSMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSQ 336
Query: 331 EGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSLKARKVVI 389
E +FG V +LS PFVLRTP + AM +D S +LQ V L + G+ E LK RK+V+
Sbjct: 337 ESDIFG-PVSSRLSTPFVLRTPSVAAMHEDDSPELQEVARILKETLGISEVPLKVRKLVV 395
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFG----------KRTVVAMDGGLYEHY 439
++CD + +R RLA AGIV IL+KI D +G I +RTVVA++GGLY +Y
Sbjct: 396 KICDVVTRRAARLAAAGIVGILKKIGRDGSGGITSGRSRSDIQIMRRTVVAVEGGLYTNY 455
Query: 440 TQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFDHD 488
T +R Y+HEA+ E+LG +++++V+++ T+DGSGIG+ALLA++ S + D
Sbjct: 456 TMFREYLHEALNEILGEDVAQHVILKATEDGSGIGSALLAASYSSYSVD 504
|
Length = 509 |
| >gnl|CDD|178206 PLN02596, PLN02596, hexokinase-like | Back alignment and domain information |
|---|
Score = 483 bits (1244), Expect = e-168
Identities = 232/449 (51%), Positives = 312/449 (69%), Gaps = 10/449 (2%)
Query: 35 ILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYA 94
IL K +ECA P+ L VADA+ +DM A L + L M++SYV +LP+G+E+GL+Y
Sbjct: 41 ILRKFARECATPVSKLWEVADALVSDMTASLTAEETTTLNMLVSYVASLPSGDEKGLYYG 100
Query: 95 LDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKF-AEKE 153
L+L G+NF +LR +LGG+ E + E++SIP ++ GTS+ELFD+IA LAKF AE
Sbjct: 101 LNLRGSNFLLLRARLGGKNEPISDLYREEISIPSNVLNGTSQELFDYIALELAKFVAEHP 160
Query: 154 AGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQ 213
+ P+ R +++GFT S+PV Q + SG IKW K FS T GK +V +N A+E+
Sbjct: 161 GDEADTPE-RVKKLGFTVSYPVDQAAASSGSAIKW-KSFSADDTVGKALVNDINRALEKH 218
Query: 214 GLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGR 273
GL +RV ALV+DT+G LAG RY+++D + AV LG GTNA YVE AIPK Q S
Sbjct: 219 GLKIRVFALVDDTIGNLAGGRYYNKDTVAAVTLGMGTNAAYVEPAQAIPKWQSPSPESQE 278
Query: 274 TIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEG 332
+I+TEWG F S LP+TEFD +DA S NPG +I+EK SGMYLGEIVRRVLLKMAEE
Sbjct: 279 IVISTEWGNFNSCHLPITEFDASLDAESSNPGSRIFEKLTSGMYLGEIVRRVLLKMAEET 338
Query: 333 ALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGV-ESSLKARKVVIEV 391
ALFG+++P KL+ P++LR+P + AM QD SED + V L ++ G+ +S+ AR+VV EV
Sbjct: 339 ALFGDTLPPKLTTPYLLRSPDMAAMHQDTSEDHEVVNEKLKEIFGITDSTPMAREVVAEV 398
Query: 392 CDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVT 451
CD + +RG RLAGAGIV I++K+ G I K++VV ++GGLYEHY +R Y+H +V
Sbjct: 399 CDIVAERGARLAGAGIVGIIKKL-----GRIENKKSVVTVEGGLYEHYRVFRNYLHSSVW 453
Query: 452 ELLGTEISKNVVIEHTKDGSGIGAALLAS 480
E+LG+E+S NVVIEH+ GSG GA LA+
Sbjct: 454 EMLGSELSDNVVIEHSHGGSGAGALFLAA 482
|
Length = 490 |
| >gnl|CDD|227359 COG5026, COG5026, Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 328 bits (842), Expect = e-108
Identities = 181/469 (38%), Positives = 256/469 (54%), Gaps = 22/469 (4%)
Query: 21 TMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYV 80
T+ V + + +V +L + P LR V A ++ GL G L MI ++V
Sbjct: 10 TLGVEAALEQAVE----ELVESFTVPTEDLREVVKAFIEELEKGLQPKSGDFLPMIPTWV 65
Query: 81 DALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCG-TSEELF 139
LPTGNE G A+DLGGTN RV V LGG E + +P E + +ELF
Sbjct: 66 APLPTGNESGSVLAIDLGGTNLRVCLVVLGGDGTFD--IEQSKSFLPVECRDSESRDELF 123
Query: 140 DFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAG 199
FIA LA F ++ + G + IGFTFS+P+ QTSI+ G LI+WTKGF + G
Sbjct: 124 GFIADRLAAFIKE---QHPSGYGSKLPIGFTFSYPLNQTSINEGQLIRWTKGFDIPEVIG 180
Query: 200 KDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMD 259
DVV L EA+ + L +RV A++NDT GTL + Y + ++ +I GTGTN CY E
Sbjct: 181 TDVVRLLQEALSARNLPIRVVAVINDTTGTLLASVYTSSETIIGIIFGTGTNGCYCEPKG 240
Query: 260 AIPKLQGNKSP-SGRTIINTEWGAFS---KGLPLTEFDRDMDAASINPGEQIYEKTISGM 315
IPKL + P +G +IN EWG+F LP T++D +D S NPG QI+EK SGM
Sbjct: 241 RIPKLPRDDLPETGPMLINCEWGSFDNELSVLPRTKYDVLIDQESPNPGHQIFEKMSSGM 300
Query: 316 YLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDV 375
YLGE++R +L + E+G +F PEKL+ PF L T + +++D E+L+ +T +
Sbjct: 301 YLGELLRLILRNLYEQGLIFNGQDPEKLTDPFALSTSVLSRIEEDPFENLRNTLTTFLND 360
Query: 376 AGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGL 435
++ + RK++ + + I +R RLA I +I+ K GA K V DG +
Sbjct: 361 FRAPTTKEERKLIRRLVELIGRRAARLAAVPIAAIVIK-----TGA--YKAYHVGADGSV 413
Query: 436 YEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSK 484
E Y +R + EA+ LLG E K + I+ +DGSG+GAAL A K
Sbjct: 414 IERYPGFRSMLREALKALLGEEGEK-IKIKPAEDGSGLGAALCALLAQK 461
|
Length = 466 |
| >gnl|CDD|240270 PTZ00107, PTZ00107, hexokinase; Provisional | Back alignment and domain information |
|---|
Score = 322 bits (828), Expect = e-106
Identities = 149/430 (34%), Positives = 215/430 (50%), Gaps = 40/430 (9%)
Query: 73 LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQL--GGQEERVQAT---EFEQVSIP 127
KM+ S V LPTG E+G++YA+D GGTNFR +RV L GG+ ER Q+ +
Sbjct: 57 FKMLDSCVYNLPTGKEKGVYYAIDFGGTNFRAVRVSLRGGGKMERTQSKFSLPKSALLGE 116
Query: 128 QELM--CGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVL 185
+ L+ T+ +LFD IA + K E+ + +GFTFSFP Q S+++ +L
Sbjct: 117 KGLLDKKATATDLFDHIAKSIKKMMEENGD--PEDLNKPVPVGFTFSFPCTQLSVNNAIL 174
Query: 186 IKWTKGFSVS-----GTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE-- 238
I WTKGF GKDV LN+A +R + V A++NDTVGTL Y
Sbjct: 175 IDWTKGFETGRATNDPVEGKDVGELLNDAFKRNNVPANVVAVLNDTVGTLISCAYQKPKN 234
Query: 239 --DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDM 296
V VI+GTG+NACY E + G T IN E G F LP+T +D +M
Sbjct: 235 TPPCQVGVIIGTGSNACYFEPEVSAYGYAG-------TPINMECGNFDSKLPITPYDLEM 287
Query: 297 DAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICA 356
D + N G Q +EK ISG YLGEI RR+++ + + A P K+ +
Sbjct: 288 DWYTPNRGRQQFEKMISGAYLGEISRRLIVHLLQLKA------PPKMWQSGSFESEDASM 341
Query: 357 MQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDE 416
+ D S DLQ + + V+ + + + ++C+ + R +LA A I + +K
Sbjct: 342 ILNDQSPDLQFSRQVIKEAWDVDLTDEDLYTIRKICELVRGRAAQLAAAFIAAPAKKTRT 401
Query: 417 DSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAA 476
+ VA+DG +Y +RR + E + +LG + NVV DGSG GAA
Sbjct: 402 VQG------KATVAIDGSVYVKNPWFRRLLQEYINSILGPDAG-NVVFYLADDGSGKGAA 454
Query: 477 LLAS--ANSK 484
++A+ AN K
Sbjct: 455 IIAAMVANDK 464
|
Length = 464 |
| >gnl|CDD|202746 pfam03727, Hexokinase_2, Hexokinase | Back alignment and domain information |
|---|
Score = 226 bits (579), Expect = 1e-71
Identities = 100/241 (41%), Positives = 142/241 (58%), Gaps = 12/241 (4%)
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG---LPLTEFDRDMDA 298
+ +I+GTGTNACY+E+M I KL+G GR IN EWGAF G LP T++D +D
Sbjct: 4 IGLIVGTGTNACYMEEMRNIEKLEG---DDGRMCINMEWGAFDNGHLDLPRTKYDVVIDE 60
Query: 299 ASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQ 358
S NPG+Q +EK ISGMYLGEIVR +LL +A++G LF KL P T + ++
Sbjct: 61 ESPNPGQQRFEKMISGMYLGEIVRLILLDLAKQGLLFKGQDSPKLLTPGSFETSVLSRIE 120
Query: 359 QDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDS 418
D SE+L+ V + L G+E++ + RK+V VC+ + R RL AG+ +ILQKI E
Sbjct: 121 SD-SENLEDVRAILQTALGLETTDEERKLVRRVCEAVSTRAARLCAAGLAAILQKIRE-- 177
Query: 419 NGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALL 478
N + V +DG +Y+ Y ++ + E + +L +V +DGSG GAAL+
Sbjct: 178 NRGYEHLKVTVGVDGSVYKLYPGFKERLAETLRDLAPDC---DVSFIPAEDGSGKGAALV 234
Query: 479 A 479
A
Sbjct: 235 A 235
|
Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam00349. Some members of the family have two copies of each of these domains. Length = 238 |
| >gnl|CDD|201171 pfam00349, Hexokinase_1, Hexokinase | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 3e-62
Identities = 92/191 (48%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 50 LRNVADAMTADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
LR V ++M GL +GG + M+ ++V + PTG E+G F ALDLGGTNFRVL V
Sbjct: 20 LREVVKRFISEMEKGLSKEGGNLAAVPMLPTFVRSTPTGTEKGDFLALDLGGTNFRVLLV 79
Query: 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167
+L G +V+ + +P+ELM GT E+LFDFIA L F ++ +F L + +
Sbjct: 80 KLTG-NGKVE-MTQSKYRLPEELMTGTGEQLFDFIADCLKDFMDE---QFPLGKKEPLPL 134
Query: 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGL-DMRVSALVNDT 226
GFTFSFP QTSI+ G+LI+WTKGF +SG G DVV L EA++R+G+ D+ V A+VNDT
Sbjct: 135 GFTFSFPCSQTSINEGILIRWTKGFKISGVEGHDVVPLLQEAIKRRGIPDIDVVAVVNDT 194
Query: 227 VGTLAGARYWD 237
VGTL Y D
Sbjct: 195 VGTLMACAYTD 205
|
Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam03727. Some members of the family have two copies of each of these domains. Length = 205 |
| >gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 3e-06
Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 28/166 (16%)
Query: 94 ALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKE 153
+D+G T+ + L G+ + E + + +EL + + L + +
Sbjct: 2 GIDIGSTSTKAGVADLDGE---ILPEEIVPTPVGRPGAVTDLDELEEALRELLKEALRQL 58
Query: 154 AGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQ 213
+ +G T V + + + +L + A+ +
Sbjct: 59 KSEID-------AVGITEPGGVPKENREVIILPNLL---------------LIPLALALE 96
Query: 214 GLDMRVSALVNDTVGTLAGARYW--DEDVMVAVILGTG-TNACYVE 256
L A+VND V + +ED ++ V LGTG T VE
Sbjct: 97 DLGGVPVAVVNDAVAAALAEGLFGKEEDTVLVVDLGTGTTGIAIVE 142
|
This superfamily includes the actin family, the HSP70 family of molecular chaperones and nucleotide exchange factors, the ROK (repressor, ORF, kinase) family, the hexokinase family, the FGGY family (which includes glycerol kinase and similar carbohydrate kinases such as rhamnulokinase and xylulokinase), the exopolyphosphatase/guanosine pentaphosphate phosphohydrolase/nucleoside triphosphate diphosphohydrolase family, propionate kinase/acetate kinase family, glycerol dehydratase reactivase, 2-hydroxyglutaryl-CoA dehydratase component A, N-acetylglucosamine kinase, butyrate kinase 2, Escherichia coli YeaZ and similar glycoproteases, the cell shape-determining protein MreB, the plasmid DNA segregation factor ParM, cell cycle proteins FtsA, Pili assembly protein PilM, ethanolamine utilization protein EutJ, and similar proteins. The nucleotide-binding site residues are conserved; the nucleotide sits in a deep cleft formed between the two lobes of the nucleotide-binding domain (NBD). Substrate binding to superfamily members is associated with closure of this catalytic site cleft. The functional activities of several members of the superfamily, including hexokinases, actin, and HSP70s, are modulated by allosteric effectors, which may act on the cleft closure. Length = 185 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 489 | |||
| PLN02914 | 490 | hexokinase | 100.0 | |
| PLN02405 | 497 | hexokinase | 100.0 | |
| PLN02362 | 509 | hexokinase | 100.0 | |
| PLN02596 | 490 | hexokinase-like | 100.0 | |
| PTZ00107 | 464 | hexokinase; Provisional | 100.0 | |
| KOG1369 | 474 | consensus Hexokinase [Carbohydrate transport and m | 100.0 | |
| COG5026 | 466 | Hexokinase [Carbohydrate transport and metabolism] | 100.0 | |
| PF03727 | 243 | Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexo | 100.0 | |
| PF00349 | 206 | Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexo | 100.0 | |
| PRK13310 | 303 | N-acetyl-D-glucosamine kinase; Provisional | 99.97 | |
| TIGR00744 | 318 | ROK_glcA_fam ROK family protein (putative glucokin | 99.96 | |
| PRK09698 | 302 | D-allose kinase; Provisional | 99.96 | |
| COG1940 | 314 | NagC Transcriptional regulator/sugar kinase [Trans | 99.96 | |
| PRK09557 | 301 | fructokinase; Reviewed | 99.96 | |
| PRK05082 | 291 | N-acetylmannosamine kinase; Provisional | 99.95 | |
| PRK12408 | 336 | glucokinase; Provisional | 99.94 | |
| PRK00292 | 316 | glk glucokinase; Provisional | 99.93 | |
| PRK13311 | 256 | N-acetyl-D-glucosamine kinase; Provisional | 99.92 | |
| PRK14101 | 638 | bifunctional glucokinase/RpiR family transcription | 99.84 | |
| TIGR00749 | 316 | glk glucokinase, proteobacterial type. This model | 99.84 | |
| PF00480 | 179 | ROK: ROK family; InterPro: IPR000600 A family of b | 99.83 | |
| PTZ00288 | 405 | glucokinase 1; Provisional | 99.66 | |
| KOG1794 | 336 | consensus N-Acetylglucosamine kinase [Carbohydrate | 99.19 | |
| PF02685 | 316 | Glucokinase: Glucokinase; InterPro: IPR003836 Gluc | 99.15 | |
| PF01869 | 271 | BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In | 99.15 | |
| TIGR02707 | 351 | butyr_kinase butyrate kinase. This model represent | 99.13 | |
| PRK03011 | 358 | butyrate kinase; Provisional | 99.01 | |
| smart00732 | 99 | YqgFc Likely ribonuclease with RNase H fold. YqgF | 98.86 | |
| COG2971 | 301 | Predicted N-acetylglucosamine kinase [Carbohydrate | 98.55 | |
| COG0837 | 320 | Glk Glucokinase [Carbohydrate transport and metabo | 98.21 | |
| PRK13318 | 258 | pantothenate kinase; Reviewed | 97.72 | |
| PRK00976 | 326 | hypothetical protein; Provisional | 97.23 | |
| PF00370 | 245 | FGGY_N: FGGY family of carbohydrate kinases, N-ter | 97.08 | |
| TIGR01312 | 481 | XylB D-xylulose kinase. D-xylulose kinase (XylB) g | 97.06 | |
| PRK13321 | 256 | pantothenate kinase; Reviewed | 96.83 | |
| TIGR01315 | 541 | 5C_CHO_kinase FGGY-family pentulose kinase. This m | 96.53 | |
| TIGR01314 | 505 | gntK_FGGY gluconate kinase, FGGY type. Gluconate i | 96.27 | |
| TIGR01311 | 493 | glycerol_kin glycerol kinase. This model describes | 96.23 | |
| PRK10939 | 520 | autoinducer-2 (AI-2) kinase; Provisional | 96.17 | |
| PRK00047 | 498 | glpK glycerol kinase; Provisional | 96.05 | |
| TIGR01234 | 536 | L-ribulokinase L-ribulokinase. This enzyme catalyz | 95.97 | |
| PRK15027 | 484 | xylulokinase; Provisional | 95.89 | |
| PRK10331 | 470 | L-fuculokinase; Provisional | 95.55 | |
| COG1070 | 502 | XylB Sugar (pentulose and hexulose) kinases [Carbo | 95.21 | |
| PTZ00294 | 504 | glycerol kinase-like protein; Provisional | 95.02 | |
| TIGR02628 | 465 | fuculo_kin_coli L-fuculokinase. Members of this fa | 95.0 | |
| PRK04123 | 548 | ribulokinase; Provisional | 94.99 | |
| PLN02295 | 512 | glycerol kinase | 94.77 | |
| COG0554 | 499 | GlpK Glycerol kinase [Energy production and conver | 93.89 | |
| KOG2517 | 516 | consensus Ribulose kinase and related carbohydrate | 93.26 | |
| TIGR00241 | 248 | CoA_E_activ CoA-substrate-specific enzyme activase | 91.42 | |
| PLN02669 | 556 | xylulokinase | 89.86 | |
| COG1069 | 544 | AraB Ribulose kinase [Energy production and conver | 89.15 | |
| TIGR02627 | 454 | rhamnulo_kin rhamnulokinase. This model describes | 87.98 | |
| TIGR01175 | 348 | pilM type IV pilus assembly protein PilM. This pro | 85.54 | |
| PF02782 | 198 | FGGY_C: FGGY family of carbohydrate kinases, C-ter | 83.54 | |
| PTZ00009 | 653 | heat shock 70 kDa protein; Provisional | 82.57 | |
| COG5146 | 342 | PanK Pantothenate kinase, acetyl-CoA regulated [Co | 82.15 | |
| TIGR03286 | 404 | methan_mark_15 putative methanogenesis marker prot | 80.88 |
| >PLN02914 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-119 Score=939.05 Aligned_cols=483 Identities=84% Similarity=1.287 Sum_probs=444.5
Q ss_pred CCcccceeeecCCCCCCceEEEEeecCcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcc
Q 011283 2 LPAVGSLCISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVD 81 (489)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~ 81 (489)
.|++||.-.|+.|++.|+.-|++++. ..++.+++++++++|.+|.++|++|+++|.+||++||+.++.|+++||||||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MlpTyv~ 86 (490)
T PLN02914 8 TPAIGSFTFSSRPRRRPRSRMAVRSN-AVSVAPILTKLQKDCATPLPVLRHVADAMAADMRAGLAVDGGGDLKMILSYVD 86 (490)
T ss_pred ccCccceEEecCcccCccHHHHHHHh-HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhccCCCCCcceeccccC
Confidence 58999999999999999999999885 33688999999999999999999999999999999999865688999999999
Q ss_pred cCcCCCccccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCC
Q 011283 82 ALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQ 161 (489)
Q Consensus 82 ~lP~G~E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~ 161 (489)
++|+|+|+|.|||||||||||||++|++.|++..+..+.+++++||.+++.+++++||||||+||++|++++....+...
T Consensus 87 ~lPtG~E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~ip~~l~~gt~~eLFdfIA~~i~~fl~~~~~~~~~~~ 166 (490)
T PLN02914 87 SLPSGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFEQVSIPQELMFGTSEELFDFIASGLANFVAKEGGKFHLPE 166 (490)
T ss_pred CCCCCCeeeEEEEEecCCceEEEEEEEecCCCCceeeeeEEEecCChhhccCCHHHHHHHHHHHHHHHHHhccccccCCc
Confidence 99999999999999999999999999998865445555566899999999999999999999999999988753222212
Q ss_pred CceeeeeeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceE
Q 011283 162 GRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVM 241 (489)
Q Consensus 162 ~~~~~lG~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~ 241 (489)
++.+++|||||||++|+++++|+|++|||||++++++|+||+++|+++|+|+++||+|+||+|||||||++++|.++++.
T Consensus 167 ~~~l~LGfTFSFP~~Q~si~~g~Li~WTKGF~~~gv~G~DVv~lL~~Al~r~~l~v~v~AivNDTVGTL~a~aY~~~~~~ 246 (490)
T PLN02914 167 GRKREIGFTFSFPVKQTSIDSGILMKWTKGFAVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDDDVM 246 (490)
T ss_pred cccccceeeEeeeeecCCCCceEEEEeccccccCCccCchHHHHHHHHHHHcCCCceEEEEEEcCHHHHHhhhcCCCCce
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHH
Q 011283 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIV 321 (489)
Q Consensus 242 iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~ 321 (489)
||+|+|||+|+||+|+.+.|+|+++..+..++|+||||||.|++.||+|+||+.+|+.|.|||+|+||||+||+|||||+
T Consensus 247 iGlIlGTGtNacY~E~~~~i~k~~~~~~~~~~miINtEwG~F~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEiv 326 (490)
T PLN02914 247 VAVILGTGTNACYVERTDAIPKLQGQKSSSGRTIINTEWGAFSDGLPLTEFDREMDAASINPGEQIFEKTISGMYLGEIV 326 (490)
T ss_pred EEEEEECCeeeEEEeecccccccccCCCCCceEEEeccccccCCCCCCChHHHHHhhCCCCCCcchhhhHHhhhhHHHHH
Confidence 99999999999999999999999876566789999999999965799999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCc
Q 011283 322 RRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401 (489)
Q Consensus 322 R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~ 401 (489)
|++++++++++.||.+..|+.|.++|+|+|++|++|+.|+++++..+.++|++.++++++.+|++++++||++|.+|||+
T Consensus 327 RlvLl~l~~~~~lF~~~~~~~L~~~~~l~T~~ls~i~~D~s~~l~~~~~~l~~~~~~~~~~~d~~~vr~i~~~V~~RAAr 406 (490)
T PLN02914 327 RRVLLKMAETSDLFGHFVPEKLSTPFALRTPHLCAMQQDNSDDLQAVGSILYDVLGVEASLSARRRVVEVCDTIVKRGGR 406 (490)
T ss_pred HHHHHHHHHhcccccCCCcHhhcCCCccccHHHHHHhcCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred cccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhc
Q 011283 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASA 481 (489)
Q Consensus 402 l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~ 481 (489)
|+|++|+||+++++.........++.+|++|||||++||.|+++++++++++++++..++|+|++++|||++|||++||+
T Consensus 407 L~Aa~iaail~k~~~~~~~~~~~~~~~VavDGSv~~~~p~f~~~l~~~l~ellg~~~~~~i~i~~a~DGSGvGAAl~AA~ 486 (490)
T PLN02914 407 LAGAGIVGILEKMEEDSKGMIFGKRTVVAMDGGLYEKYPQYRRYMQDAVTELLGLELSKNIAIEHTKDGSGIGAALLAAT 486 (490)
T ss_pred HHHHHHHHHHHHhcccccccCCCceEEEEEeCchhhcCccHHHHHHHHHHHHhCcccCCcEEEEEccCchHHHHHHHHHH
Confidence 99999999999987631100001357999999999999999999999999999877677899999999999999999999
Q ss_pred cccc
Q 011283 482 NSKF 485 (489)
Q Consensus 482 ~~~~ 485 (489)
++.|
T Consensus 487 ~s~~ 490 (490)
T PLN02914 487 NSKY 490 (490)
T ss_pred hhcC
Confidence 9875
|
|
| >PLN02405 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-116 Score=921.85 Aligned_cols=459 Identities=60% Similarity=0.999 Sum_probs=421.6
Q ss_pred CcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEE
Q 011283 28 VNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107 (489)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV 107 (489)
+|..+++++++++++|.+|.++|++|+++|.+||++||+++..|+++||||||+++|||+|+|.|||||||||||||++|
T Consensus 33 ~~~~~~~~l~~~~~~f~~~~~~L~~v~~~f~~em~~GL~~~~~s~l~MlpSyv~~lPtG~E~G~flAlDlGGTNfRV~~V 112 (497)
T PLN02405 33 KWARAMEILKEFEEDCATPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDEKGLFYALDLGGTNFRVLRV 112 (497)
T ss_pred hhhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCcceeccccccCCCCCcceeEEEEecCCceEEEEEE
Confidence 55678999999999999999999999999999999999986568999999999999999999999999999999999999
Q ss_pred EeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeee
Q 011283 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIK 187 (489)
Q Consensus 108 ~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~ 187 (489)
+|.|++..++.+.+++++||.+++.+++++||||||++|.+|+++++.......++.+++|||||||++|+++++|+|++
T Consensus 113 ~L~g~~~~~~~~~~~~~~ip~~~~~gt~~~LFdfIA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFPv~Qtsi~~g~Li~ 192 (497)
T PLN02405 113 LLGGKDGRVVKQEFEEVSIPPHLMTGSSDALFDFIAAALAKFVATEGEDFHLPPGRQRELGFTFSFPVKQTSISSGTLIK 192 (497)
T ss_pred EEcCCCCceeEEEEEEeecChhhccCCHHHHHHHHHHHHHHHHHhcccccccCcccccccceeEeeeeccCCCCceEEEE
Confidence 99886544555555689999999999999999999999999998876332111235799999999999999999999999
Q ss_pred eccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccCC
Q 011283 188 WTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGN 267 (489)
Q Consensus 188 wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~ 267 (489)
|||||++++++|+||+++|+++|+|+++||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.++|+|+++.
T Consensus 193 WTKGF~~~~~vG~DVv~lL~~Al~r~~l~v~v~AlvNDTVGTL~a~aY~~~~~~iG~IlGTGtNacY~E~~~~i~k~~~~ 272 (497)
T PLN02405 193 WTKGFSIDDAVGQDVVGELTKAMERVGLDMRVSALVNDTIGTLAGGRYYNPDVVAAVILGTGTNAAYVERAQAIPKWHGL 272 (497)
T ss_pred eccccccCCccCchHHHHHHHHHHHcCCCceEEEEEecCHHHHHHhhcCCCCceEEEEEeCCeeeEEEeecccCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCeeeecccccc-cCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcccccccc
Q 011283 268 KSPSGRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMP 346 (489)
Q Consensus 268 ~~~~g~miIn~E~G~f-~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~ 346 (489)
.+..++|+||||||.| +.+||+|+||..+|..|.|||+|+||||+||+|||||+|++++++++++.||++..|+.|.++
T Consensus 273 ~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlvLl~l~~~~~lF~g~~~~~L~~~ 352 (497)
T PLN02405 273 LPKSGEMVINMEWGNFRSSHLPLTEYDHALDVESLNPGEQIFEKIISGMYLGEILRRVLLKMAEEAAFFGDTVPPKLKIP 352 (497)
T ss_pred CCCCCeEEEEeccccCCCCCCCCchHHHHHhhcCCCCCcchhhHHHhhccHHHHHHHHHHHHHHhccccCCCCcHhhcCC
Confidence 5667899999999999 568999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccccccccCchhHhhhhhhhhhhcccc-cccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccc
Q 011283 347 FVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGK 425 (489)
Q Consensus 347 ~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~-~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~ 425 (489)
|+|+|++|+.|+.|++++++.+.+++++.|+++ .+.+|++++++||+.|.+|||+|+|++|++|+++++.........+
T Consensus 353 ~~l~T~~ls~i~~D~s~~l~~~~~~l~~~l~~~~~~~~~~~~vr~i~~~V~~RAArL~Aa~iaail~k~~~~~~~~~~~~ 432 (497)
T PLN02405 353 FILRTPDMSAMHHDTSPDLKVVGSKLKDILEIPNTSLKMRKVVVELCNIVATRGARLSAAGIYGILKKLGRDTVKDGEKQ 432 (497)
T ss_pred CCcccHHHHHHhcCCCchHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCc
Confidence 999999999999999999999999999999987 5558999999999999999999999999999999987421100113
Q ss_pred eeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhcccccc
Q 011283 426 RTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFD 486 (489)
Q Consensus 426 ~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~~ 486 (489)
+.+|++|||+|++||.|+++++++++++++++..++|++++++|||++|||++||+++++.
T Consensus 433 ~~~VavDGsvye~yp~f~~~~~~~l~ell~~~~~~~v~l~~a~DGSGvGAAl~AA~~~~~~ 493 (497)
T PLN02405 433 KSVIAMDGGLFEHYTEFSKCMESTLKELLGEEVSESIEVEHSNDGSGIGAALLAASHSLYL 493 (497)
T ss_pred ceEEEEeCchhhcCcCHHHHHHHHHHHHhCcccCceEEEEEecCchHHHHHHHHHHHhhhh
Confidence 5789999999999999999999999999987666789999999999999999999998763
|
|
| >PLN02362 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-114 Score=912.87 Aligned_cols=460 Identities=55% Similarity=0.922 Sum_probs=420.6
Q ss_pred CcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEE
Q 011283 28 VNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107 (489)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV 107 (489)
+|..+++++++++++|.+|.++|++|+++|++||++||+++..|+++||||||+++|||+|+|.|||||||||||||++|
T Consensus 33 ~~~~~~~~l~~~~~~f~~~~~~L~~v~~~f~~em~~GL~~~~~s~l~MlPTyv~~lPtG~E~G~fLAlDlGGTNfRV~~V 112 (509)
T PLN02362 33 KWRRVVGVLKELEEACETPVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDDLPTGSEIGTYYALDLGGTNFRVLRV 112 (509)
T ss_pred hhhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCCceecCccCCCCCCCcceeEEEEecCCceEEEEEE
Confidence 55678999999999999999999999999999999999986568999999999999999999999999999999999999
Q ss_pred EeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeee
Q 011283 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIK 187 (489)
Q Consensus 108 ~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~ 187 (489)
++.|++.....+..++|+||.+++.+++++||||||+||.+|++++....+......+++|||||||++|+++++|+|++
T Consensus 113 ~L~g~~~~~~~~~~~~~~Ip~~l~~~~~~eLFd~IA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFPv~Q~si~~g~Li~ 192 (509)
T PLN02362 113 QLGGQRSSILSQDVERHPIPQHLMNSTSEVLFDFIASSLKQFVEKEENGSEFSQVRRRELGFTFSFPVKQTSISSGILIK 192 (509)
T ss_pred EecCCCcceeeceeEEEecChhhccCCHHHHHHHHHHHHHHHHHhcCccccccccccccceeEEeeeeccCCCCceEEEE
Confidence 99886545554444579999999999999999999999999999876432111235699999999999999999999999
Q ss_pred eccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccCC
Q 011283 188 WTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGN 267 (489)
Q Consensus 188 wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~ 267 (489)
|||||++++++|+||+++|+++|+|+++||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.+.|+|+++.
T Consensus 193 WtKGF~~~~v~G~DVv~lL~~Al~r~~l~v~v~AlvNDTVgTL~a~aY~~~~~~iG~IlGTGtNacY~E~~~~i~k~~~~ 272 (509)
T PLN02362 193 WTKGFAISDMVGKDVAECLQGALNRRGLDMRVAALVNDTVGTLALGHYHDPDTVAAVIIGTGTNACYLERTDAIIKCQGL 272 (509)
T ss_pred eccccccCcccCchHHHHHHHHHHHcCCCcEEEEEEEcCHHHHHhhhcCCCCceEEEEEECCccceEeeehhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCeeeecccccc-cCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcccccccc
Q 011283 268 KSPSGRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMP 346 (489)
Q Consensus 268 ~~~~g~miIn~E~G~f-~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~ 346 (489)
.+..++|+||||||.| +.+||+|+||..+|.+|.|||+|+||||+||+|||||+|++++++++++.||++ .|+.|.++
T Consensus 273 ~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlvL~~l~~~~~lF~~-~~~~L~~~ 351 (509)
T PLN02362 273 LTTSGSMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSQESDIFGP-VSSRLSTP 351 (509)
T ss_pred CCCCCcEEEEeeccCCCCCCCCCchHHHHHhcCCCCcCcchHHHHHhhccHHHHHHHHHHHHHhccccccC-CcHhhcCC
Confidence 5667899999999999 568999999999999999999999999999999999999999999999999975 68889999
Q ss_pred ccccCcccccccccCchhHhhhhhhhhhhcccc-cccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCc-cc--
Q 011283 347 FVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNG-AI-- 422 (489)
Q Consensus 347 ~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~-~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~-~~-- 422 (489)
|+|+|++|+.|+.|++++++.+.++|++.++++ ++.+|++++++||..|.+|||+|+|++|++|+++++...+. ..
T Consensus 352 ~~l~T~~ls~i~~d~s~~l~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~V~~RaArL~Aa~iaail~k~~~~~~~~~~~~ 431 (509)
T PLN02362 352 FVLRTPSVAAMHEDDSPELQEVARILKETLGISEVPLKVRKLVVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGITSG 431 (509)
T ss_pred CccccHHHHHHhcCCChhHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 999999999999999999999999999999987 67899999999999999999999999999999999842110 00
Q ss_pred -------ccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhccccccCC
Q 011283 423 -------FGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFDHD 488 (489)
Q Consensus 423 -------~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~~~~ 488 (489)
..++.+|++|||+|++||.|+++++++++++++++...+|.|++++|||++|||++||++++|.+|
T Consensus 432 ~~~~~~~~~~~~~VavDGsvye~yp~f~~~~~~~l~ell~~~~~~~v~i~~a~DGSgvGAAl~AA~~~~~~~~ 504 (509)
T PLN02362 432 RSRSDIQIMRRTVVAVEGGLYTNYTMFREYLHEALNEILGEDVAQHVILKATEDGSGIGSALLAASYSSYSVD 504 (509)
T ss_pred ccccccCCCceEEEEEeCchhhcCcCHHHHHHHHHHHHhCcccCceEEEEEccCchHHHHHHHHHHHHhhhhh
Confidence 013479999999999999999999999999998766778999999999999999999999998665
|
|
| >PLN02596 hexokinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-114 Score=905.17 Aligned_cols=451 Identities=51% Similarity=0.855 Sum_probs=418.3
Q ss_pred CcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEE
Q 011283 28 VNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107 (489)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV 107 (489)
+|+++++++++|+++|.+|.++|++|+++|.+||++||+.+..|+++||||||+++|||+|+|.|||||+|||||||++|
T Consensus 34 ~~~~~~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MlpTyv~~lPtG~E~G~yLAlDlGGTNfRV~~V 113 (490)
T PLN02596 34 QWKHTQRILRKFARECATPVSKLWEVADALVSDMTASLTAEETTTLNMLVSYVASLPSGDEKGLYYGLNLRGSNFLLLRA 113 (490)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCCceecccCCCCCCCCcceEEEEEeeCCceEEEEEE
Confidence 78899999999999999999999999999999999999876568999999999999999999999999999999999999
Q ss_pred EeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeee
Q 011283 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIK 187 (489)
Q Consensus 108 ~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~ 187 (489)
+|.|++..+....+++|+||.+++.+++++||||||+||++|+++++.......+..+++|||||||++|+++++|+|++
T Consensus 114 ~L~g~~~~~~~~~~~~~~Ip~~l~~~t~~eLFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFP~~Q~si~~G~Li~ 193 (490)
T PLN02596 114 RLGGKNEPISDLYREEISIPSNVLNGTSQELFDYIALELAKFVAEHPGDEADTPERVKKLGFTVSYPVDQAAASSGSAIK 193 (490)
T ss_pred EEcCCCCceEEEEEEEecCChHhhcCCHHHHHHHHHHHHHHHHHhhccccccCcccccccceEEeeeeeecCCCCEEEEE
Confidence 99876444455555689999999999999999999999999998875432111234699999999999999999999999
Q ss_pred eccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccCC
Q 011283 188 WTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGN 267 (489)
Q Consensus 188 wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~ 267 (489)
| |||++++++|+||+++|+++++|+++||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.++|+|+++.
T Consensus 194 W-KgF~~~~~vG~Dvv~lL~~Al~r~~l~v~v~AivNDTVgTL~a~aY~~~~~~iG~I~GTGtNacY~E~~~~i~k~~~~ 272 (490)
T PLN02596 194 W-KSFSADDTVGKALVNDINRALEKHGLKIRVFALVDDTIGNLAGGRYYNKDTVAAVTLGMGTNAAYVEPAQAIPKWQSP 272 (490)
T ss_pred e-ccccCCCccCcHHHHHHHHHHHhcCCCceEEEEEEcCHHHHHhhhcCCCCeEEEEEEecccceEEEEEccccccccCC
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCeeeecccccc-cCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcccccccc
Q 011283 268 KSPSGRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMP 346 (489)
Q Consensus 268 ~~~~g~miIn~E~G~f-~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~ 346 (489)
.+..++|+||||||+| +..+|+|+||+.+|+.|.|||+|+||||+||+|||||+|++++++++++.||++..|+.|.++
T Consensus 273 ~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKMiSG~YLGElvRlvl~~l~~~~~lF~~~~~~~L~~~ 352 (490)
T PLN02596 273 SPESQEIVISTEWGNFNSCHLPITEFDASLDAESSNPGSRIFEKLTSGMYLGEIVRRVLLKMAEETALFGDTLPPKLTTP 352 (490)
T ss_pred CCCCCeEEEEeccccCCCCCCCCChHHHHHhccCCCCCcchHHHHHhhhhHHHHHHHHHHHHHHhccccCCCCcHhhcCC
Confidence 5667899999999999 457999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccccccccCchhHhhhhhhhhhhcccc-cccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccc
Q 011283 347 FVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGK 425 (489)
Q Consensus 347 ~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~-~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~ 425 (489)
|+|+|++|+.++.|+++++..+.+++++.|+++ ++.+|++++++||.+|.+|||+|+|++|++|++++++... +
T Consensus 353 ~~l~T~~lS~i~~d~s~~~~~~~~~l~~~l~~~~~~~~d~~~lr~i~~~V~~RAArL~Aa~iaail~k~g~~~~-----~ 427 (490)
T PLN02596 353 YLLRSPDMAAMHQDTSEDHEVVNEKLKEIFGITDSTPMAREVVAEVCDIVAERGARLAGAGIVGIIKKLGRIEN-----K 427 (490)
T ss_pred CccccHHHHHHhcCCCchHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-----C
Confidence 999999999999999999999999999999986 6779999999999999999999999999999999975321 3
Q ss_pred eeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhcccc
Q 011283 426 RTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSK 484 (489)
Q Consensus 426 ~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~ 484 (489)
+++|++|||||++||.|+++++++++++++++...+|.+.+++|||++|||++||+.+.
T Consensus 428 ~~~VavDGSvye~~p~f~~~l~~al~ellg~~~~~~i~~~~s~DGSG~GAAl~AA~~~~ 486 (490)
T PLN02596 428 KSVVTVEGGLYEHYRVFRNYLHSSVWEMLGSELSDNVVIEHSHGGSGAGALFLAACQTG 486 (490)
T ss_pred ceEEEEeCcceeeCcCHHHHHHHHHHHHhCcccCCcEEEEEccCchhHHHHHHHHhhcc
Confidence 57899999999999999999999999999876677899999999999999999998775
|
|
| >PTZ00107 hexokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-106 Score=841.52 Aligned_cols=429 Identities=34% Similarity=0.546 Sum_probs=388.0
Q ss_pred chhhHHHHHhhhcCChhHHHHHHHHHhHhhhcccccc---------CCCCcceeehhcccCcCCCccccEEEEecCCcce
Q 011283 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVD---------GGGELKMILSYVDALPTGNERGLFYALDLGGTNF 102 (489)
Q Consensus 32 ~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~---------~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnl 102 (489)
.+..+++++++|.+|.++|++|+++|++||++||+++ ..|+++||||||+++|+|+|+|.|||||+|||||
T Consensus 7 ~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~~~~~~~~~~s~l~Mlps~v~~lPtG~E~G~fLAlDlGGTN~ 86 (464)
T PTZ00107 7 QRVRLASLVNQFTMSKEKLKELVDYFLYELVEGLEAHRRHRNLWIPNECSFKMLDSCVYNLPTGKEKGVYYAIDFGGTNF 86 (464)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccccccccCCCCCCccccccccCCCCCCCccceEEEEecCCceE
Confidence 4567889999999999999999999999999999875 2588999999999999999999999999999999
Q ss_pred EEEEEEeCCccceeeecccccccccchhhcc---------ChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEee
Q 011283 103 RVLRVQLGGQEERVQATEFEQVSIPQELMCG---------TSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSF 173 (489)
Q Consensus 103 Rv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~---------~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSf 173 (489)
||++|++.|++. ....+++++||..++.+ ++++||||||++|.+|++++.... .....+++||||||
T Consensus 87 RV~~V~L~g~~~--~~~~~~~~~ip~~~~~~~~~~~~k~~t~~~lFd~IA~~i~~fl~~~~~~~--~~~~~l~lGfTFSF 162 (464)
T PTZ00107 87 RAVRVSLRGGGK--MERTQSKFSLPKSALLGEKGLLDKKATATDLFDHIAKSIKKMMEENGDPE--DLNKPVPVGFTFSF 162 (464)
T ss_pred EEEEEEeCCCCc--eeeEEEEEeCCHHHhccccccccccCCHHHHHHHHHHHHHHHHHhccccc--cccccccceeEEee
Confidence 999999987532 22233478999998887 899999999999999999875211 01356999999999
Q ss_pred eccccccccceeeeeccceee-----ecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccccccc----CceEEEE
Q 011283 174 PVKQTSIDSGVLIKWTKGFSV-----SGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD----EDVMVAV 244 (489)
Q Consensus 174 P~~q~~i~~g~li~wtKgf~~-----~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~----~~~~igl 244 (489)
|++|+++++|+|++|||||++ ++++|+||+++|+++|+|+++||+|+||+|||||||++++|.+ +++.||+
T Consensus 163 P~~Q~si~~g~Li~WtKGF~~~~~~~~~v~G~DV~~lL~~Al~r~~l~v~v~AivNDTVgTL~a~ay~~~~~~~~~~iGl 242 (464)
T PTZ00107 163 PCTQLSVNNAILIDWTKGFETGRATNDPVEGKDVGELLNDAFKRNNVPANVVAVLNDTVGTLISCAYQKPKNTPPCQVGV 242 (464)
T ss_pred eeecccCCceEEEEeccceeeccCCCCCccCchHHHHHHHHHHHcCCCceEEEEEEcCHHHHHHHHhcCcCCCCCceEEE
Confidence 999999999999999999999 8999999999999999999999999999999999999999998 9999999
Q ss_pred EecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHH
Q 011283 245 ILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRV 324 (489)
Q Consensus 245 IlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~ 324 (489)
|+|||+|+||+|+.... ...++|+||||||.|++.+|+|+||..+|+.|.|||+|+||||+||+|||||+|++
T Consensus 243 IlGTG~NacY~E~~~~~-------~~~~~~iINtEwG~F~~~lp~T~~D~~lD~~S~npg~Q~fEKmiSG~YLGEi~Rlv 315 (464)
T PTZ00107 243 IIGTGSNACYFEPEVSA-------YGYAGTPINMECGNFDSKLPITPYDLEMDWYTPNRGRQQFEKMISGAYLGEISRRL 315 (464)
T ss_pred EEeccccceeeehhhcc-------CCCCcEEEEeeccccCCCCCCChHHHHHhhcCCCCCcCchhhHHhhhhHHHHHHHH
Confidence 99999999999964321 12457999999999955699999999999999999999999999999999999999
Q ss_pred HHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCcccc
Q 011283 325 LLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAG 404 (489)
Q Consensus 325 l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~a 404 (489)
++++++++ .|+.+.++++|+|+++++|+.|.++++..+.+++++.+++.++.+|++++++||+.|.+|||+|+|
T Consensus 316 l~~l~~~~------~~~~l~~~~~~~t~~ls~i~~d~s~~l~~~~~~l~~~~~~~~~~~d~~~lr~i~~~V~~RAA~L~A 389 (464)
T PTZ00107 316 IVHLLQLK------APPKMWQSGSFESEDASMILNDQSPDLQFSRQVIKEAWDVDLTDEDLYTIRKICELVRGRAAQLAA 389 (464)
T ss_pred HHHHHhcC------CchhhcCCcccccHHHHhhhcCCCchHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998753 477888999999999999999999999999999999889887789999999999999999999999
Q ss_pred chhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhcccc
Q 011283 405 AGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSK 484 (489)
Q Consensus 405 a~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~ 484 (489)
++|+||+++++... .+++|++|||+|++||.|++++++++++++++. ..+|++++++|||++|||++||++++
T Consensus 390 a~iaail~k~~~~~------~~~~VgvDGSv~~~~p~f~~~~~~~l~~ll~~~-~~~v~l~~a~DGSg~GAAl~AA~~~~ 462 (464)
T PTZ00107 390 AFIAAPAKKTRTVQ------GKATVAIDGSVYVKNPWFRRLLQEYINSILGPD-AGNVVFYLADDGSGKGAAIIAAMVAN 462 (464)
T ss_pred HHHHHHHHHhCCCC------CceEEEEeCcceecCccHHHHHHHHHHHHhCCC-CCcEEEEEccCchHHHHHHHHHHhcc
Confidence 99999999988621 357999999999999999999999999998765 56899999999999999999998854
|
|
| >KOG1369 consensus Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-104 Score=814.89 Aligned_cols=444 Identities=48% Similarity=0.758 Sum_probs=409.2
Q ss_pred CcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCC-CCcceeehhcccCcCCCccccEEEEecCCcceEEEE
Q 011283 28 VNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGG-GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLR 106 (489)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~-s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~l 106 (489)
+++.++.+++++++.|.+|.++|++|+++|.+||++||+.... +.++||||||.++|+|+|+|.|||||||||||||++
T Consensus 23 ~~~~~~~~l~~~~~~f~l~~~~L~~v~~~~~~em~~gL~~~~~g~~~~mlpt~V~~lP~G~E~G~~lalDLGGTn~Rv~~ 102 (474)
T KOG1369|consen 23 RLAAVSRQLEELLALFQLPDEQLREVVDAFREEMERGLAKKTHGSAVKMLPTYVPDLPDGTEKGKFLALDLGGTNFRVLL 102 (474)
T ss_pred hhhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhhccCCCcccccchhhcccCCCCCcCCCEEEEecCCCceEEEE
Confidence 5788999999999999999999999999999999999995443 349999999999999999999999999999999999
Q ss_pred EEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceee
Q 011283 107 VQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLI 186 (489)
Q Consensus 107 V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li 186 (489)
|.+.|++. ...+..++|+||.+++++++++|||+|++|+..|+.+++... ...+++||||||||+|+++++|+|+
T Consensus 103 v~L~g~~~-~~~~~~~~~~ip~~~m~gt~~~Lfd~Ia~~l~~F~~~~~~~~----~~~l~lgFTFSfP~~Q~si~~g~L~ 177 (474)
T KOG1369|consen 103 VKLGGGRT-SVRMYNKIYAIPEEIMQGTGEELFDFIARCLADFLDKMGLKG----ASKLPLGFTFSFPCRQTSIDKGTLI 177 (474)
T ss_pred EEecCCcc-cceeeeeeEecCHHHHcCchHHHHHHHHHHHHHHHHHhcccc----ccccccceEEeeeeeecccccceEE
Confidence 99987643 444455589999999999999999999999999999887531 1229999999999999999999999
Q ss_pred eeccceeeecCCCchHHHHHHHHHHhcCcc-eEeeeeeccccccccccccccCceEEEEEecCCcceeEEeecccccccc
Q 011283 187 KWTKGFSVSGTAGKDVVACLNEAMERQGLD-MRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQ 265 (489)
Q Consensus 187 ~wtKgf~~~~~~G~dv~~lL~~al~~~~l~-v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~ 265 (489)
.|||||++++++|+|++++|+++++|++++ +.|+||+|||++|+++++|.+++|.||+|+|||+|+||+|+.++|++++
T Consensus 178 ~wTkGf~~~~~~g~Dvv~~L~eal~rr~~~~i~V~AlvNDTvGtl~~~~y~~~~~~igvI~GTGtNacY~e~~~~i~k~~ 257 (474)
T KOG1369|consen 178 RWTKGFKATDCEGEDVVRLLREAIKRRGLFDMDVVAVVNDTVGTLMTCAYEDPNCEIGVIFGTGTNACYMEDMRNIEKVE 257 (474)
T ss_pred EecccccchhhhcchHHHHHHHHHHHcCCcceEEEEEEecCHHhHhhceecCCCcEEEEEECCCccceeeeeccchhhcc
Confidence 999999999999999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCeeeecccccc---cCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcccc
Q 011283 266 GNKSPSGRTIINTEWGAF---SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEK 342 (489)
Q Consensus 266 g~~~~~g~miIn~E~G~f---~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~ 342 (489)
+..... +|+||||||.| +..+|+|+||..+|..|.|||+|.||||+||+|||||+|++|+++.+++.||++.. ..
T Consensus 258 ~~~~~~-~miIN~EWG~F~~~~~~l~~T~yD~~vD~eS~npG~~~~EKmisGmYLGEivR~vLl~m~~~~~lf~~~~-~~ 335 (474)
T KOG1369|consen 258 GDAGRG-PMCINTEWGAFGDNSLDLPRTEYDVVVDEESLNPGKQLFEKMISGMYLGEIVRLVLLDLLEEGLLFGGQS-TK 335 (474)
T ss_pred cccCCC-ceEEEccccCCCccccccchhhHHHHHhhhcCCcchhHHHHHhccccHHHHHHHHHHHHhHhhhhhcccc-cc
Confidence 866544 89999999999 34689999999999999999999999999999999999999999999999999887 66
Q ss_pred ccccccccCcccccccccCchhHhhhhhhhhhhcccc-cccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcc
Q 011283 343 LSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421 (489)
Q Consensus 343 l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~-~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~ 421 (489)
+ +|+.|.|+++|+|++|.++++..+.. +.+.+++. .+.+|+..++++|+.|.+|||+|+||||++++++++...
T Consensus 336 l-~p~~~~T~~~S~i~~D~~~~l~~~~~-~~~~l~~~~~~~~~r~~V~~vc~~v~~RaA~L~aagIaail~k~~~~~--- 410 (474)
T KOG1369|consen 336 L-TPFIFETKYVSAIEEDDTGALQETEK-ILDLLGLETTTTEDRKLVREVCDVVSRRAARLAAAGIAAILNKTGELS--- 410 (474)
T ss_pred c-CcceeccchHHhHhcCCchHHHHHHH-HHHhhCCCcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcccc---
Confidence 7 99999999999999999999998888 66679987 778999999999999999999999999999999998422
Q ss_pred cccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhccccccC
Q 011283 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFDH 487 (489)
Q Consensus 422 ~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~~~ 487 (489)
...++|++|||+|++||.|++++++++++++++ ...|.|.+++|||++|||++||++++++.
T Consensus 411 --~~~~~VgvdGsly~~yP~f~~~m~~~l~eLlg~--~~~v~i~~s~dgSg~GAAL~Aav~~~~~~ 472 (474)
T KOG1369|consen 411 --RKRVTVGVDGSLYKNHPFFREYLKEALRELLGP--SIHVKLVLSEDGSGRGAALIAAVASRLKQ 472 (474)
T ss_pred --cCceEEEeccchhHcCchHHHHHHHHHHHHhCC--CceEEEEECCCCccccHHHHHHHHhhhhc
Confidence 246789999999999999999999999999983 56899999999999999999999999874
|
|
| >COG5026 Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-92 Score=703.16 Aligned_cols=446 Identities=39% Similarity=0.627 Sum_probs=408.8
Q ss_pred CcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEE
Q 011283 28 VNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107 (489)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV 107 (489)
.|+.+++.+.++++.|.+|.|+|.++...|.+||++||+...++.++|+|+||...|+|+|.|.||+||+||||||+|+|
T Consensus 13 ~~~~l~~~~~~~~~~~~~p~e~l~~v~~~Fieel~kgL~~~~G~~l~MIP~~v~~~p~g~e~g~~LaiD~GGTnlRvc~V 92 (466)
T COG5026 13 VEAALEQAVEELVESFTVPTEDLREVVKAFIEELEKGLQPKSGDFLPMIPTWVAPLPTGNESGSVLAIDLGGTNLRVCLV 92 (466)
T ss_pred ccHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhccCCCCCCccccccccccCCCCCCCCCCEEEEecCCceEEEEEE
Confidence 67889999999999999999999999999999999999943334499999999999999999999999999999999999
Q ss_pred EeCCccceeeecccccccccchhhcc-ChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceee
Q 011283 108 QLGGQEERVQATEFEQVSIPQELMCG-TSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLI 186 (489)
Q Consensus 108 ~l~g~~~~i~~~~~~~~~ip~~~~~~-~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li 186 (489)
.+.|.+...+.+. +..+|.+.... +.+++|++|+++++.|++++.... ....+++|||||||++|+++++|.|+
T Consensus 93 ~l~g~gt~~~~~s--ks~lp~e~~~~~~~~~l~~~iadrl~~fi~~~~~~~---~~~~l~~gfTFSYP~~q~sin~g~l~ 167 (466)
T COG5026 93 VLGGDGTFDIEQS--KSFLPVECRDSESRDELFGFIADRLAAFIKEQHPSG---YGSKLPIGFTFSYPLNQTSINEGQLI 167 (466)
T ss_pred EeCCCCCcccccC--cccCchhhccCCChHHHHHHHHHHHHHHHHHhCchh---ccCcceeeEEEeccccccccCceeeE
Confidence 9987754444433 34489887765 789999999999999999876533 25589999999999999999999999
Q ss_pred eeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccC
Q 011283 187 KWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQG 266 (489)
Q Consensus 187 ~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g 266 (489)
+|||||++++++|.||+++|+++|++|++|++|++|+|||++|+|+..|.++++.||+|+|||+|+||+++...|+|++.
T Consensus 168 rwTKgf~i~e~ig~dvv~~l~e~l~~r~~pi~v~aviNDttgtlla~~yt~~~~~iG~IfGTGtN~~y~e~~~~ipkl~~ 247 (466)
T COG5026 168 RWTKGFDIPEVIGTDVVRLLQEALSARNLPIRVVAVINDTTGTLLASVYTSSETIIGIIFGTGTNGCYCEPKGRIPKLPR 247 (466)
T ss_pred eecccCcchhhhhhhHHHHHHHHHHhcCCceEEEEEecccHHHHHHHhhcCCCCeEEEEEecCccceEEeecccCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999884
Q ss_pred Cc-CCCCCeeeecccccc-cC--CCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcccc
Q 011283 267 NK-SPSGRTIINTEWGAF-SK--GLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEK 342 (489)
Q Consensus 267 ~~-~~~g~miIn~E~G~f-~~--~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~ 342 (489)
.. ++.+.|+||+|||.| +. +||+|+||..+|..+++||.|.||||+||+||||++|++|.++..++.+|.+..|++
T Consensus 248 d~~~~~~pm~iN~EwGsfdn~~~~Lp~t~ydv~idq~s~~pg~~~~Ek~~sG~yLGellr~~L~~l~~qg~~~~~q~~~~ 327 (466)
T COG5026 248 DDLPETGPMLINCEWGSFDNELSVLPRTKYDVLIDQESPNPGHQIFEKMSSGMYLGELLRLILRNLYEQGLIFNGQDPEK 327 (466)
T ss_pred ccccccCCeEEEecccccCcceeeccccceeeeeccCCCCcchHHHhhhhcceeHHHHHHHHHHHHHHHHhhccccchhh
Confidence 32 577889999999999 33 489999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCccc
Q 011283 343 LSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAI 422 (489)
Q Consensus 343 l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~ 422 (489)
+..|+.++|+.++.++.|++++++.+...+.+.|+.+.+.++++.++.+|+.|.+|||++.|+.++|++.+.+..+
T Consensus 328 ~~~p~~l~t~~~s~i~~D~~~nl~~t~~~f~~~~~~~tt~eer~lI~~l~~~i~~RAArlaa~~iaAi~~ktG~~k---- 403 (466)
T COG5026 328 LTDPFALSTSVLSRIEEDPFENLRNTLTTFLNDFRAPTTKEERKLIRRLVELIGRRAARLAAVPIAAIVIKTGAYK---- 403 (466)
T ss_pred cccceeeecchhhhhccccccccchhHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhHHHHhhhHHHhhhhcCCCc----
Confidence 9999999999999999999999999999999889998888999999999999999999999999999999998522
Q ss_pred ccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhcccccc
Q 011283 423 FGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFD 486 (489)
Q Consensus 423 ~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~~ 486 (489)
...|+.+|+++++||.|+++++++++.+++.... ++.++.++||+++|||++|+.+++-+
T Consensus 404 ---~~~v~~dGsv~e~yp~f~~~~~~~l~~~~g~~~~-~i~i~~a~dgsglGAAl~a~~~~k~~ 463 (466)
T COG5026 404 ---AYHVGADGSVIERYPGFRSMLREALKALLGEEGE-KIKIKPAEDGSGLGAALCALLAQKPK 463 (466)
T ss_pred ---cceeeeecchhhhchhHHHHHHHHHHHhhcccCc-eeeEEecccCcchHHHHHHHHhcccc
Confidence 2459999999999999999999999998884444 89999999999999999999887755
|
|
| >PF03727 Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-57 Score=440.54 Aligned_cols=240 Identities=43% Similarity=0.765 Sum_probs=212.2
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccc-cC--CCcccccccccccccCCcchhhhhhhhchh
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAF-SK--GLPLTEFDRDMDAASINPGEQIYEKTISGM 315 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f-~~--~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~ 315 (489)
+|.||+|+|||+|+||+|+.++|+++++ ..++|+||||||.| .+ .+|+|+||+.+|+.|.|||+|+||||+||+
T Consensus 1 ~~~iGlIlGTG~Na~Y~e~~~~i~~~~~---~~~~~iINtEwg~f~~~~~~~~~t~~D~~lD~~s~~pg~q~~EKmvsG~ 77 (243)
T PF03727_consen 1 ECRIGLILGTGTNACYMEKTSNIPKLKG---KDGKMIINTEWGNFDNGLLDLPRTEYDKQLDAESPNPGFQPFEKMVSGM 77 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGG-TTSST---SSSEEEEEE-GGGTTTTTTTTTS-HHHHHHHHTSSSTTSSTTHHHTSHH
T ss_pred CcEEEEEEeCCeeEEEeeecccCccccc---cCCeEEEEeecCCCCCCCccCCCCcccHHHhhhhhccCceEEeeEecee
Confidence 4899999999999999999999999987 66889999999999 32 369999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhh
Q 011283 316 YLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTI 395 (489)
Q Consensus 316 yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V 395 (489)
|||||+|++++++++++.||.+..|+.+.++++|+|++|+.+++|++.++..++.+|.+.+++.++.+|+..+++||++|
T Consensus 78 YLGEl~Rlvl~~l~~~~~lf~~~~~~~l~~~~~~~t~~~s~i~~d~~~~~~~~~~~l~~~~~~~~t~~d~~~lr~I~~aV 157 (243)
T PF03727_consen 78 YLGELVRLVLLDLIKEGLLFGGQDPEKLNTPYSFDTKFLSEIEEDPSDDLSETREILQEFFGLPPTEEDRQILRRICEAV 157 (243)
T ss_dssp HHHHHHHHHHHHHHHTTSSGGGS--TTTTSTTSS-HHHHHHHTCT-TTCHHHHHHHHHHCTTSSS-HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCccCCcchHHhcCCCcccHHHHhhhhhhcccchHHHHHHHhhccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999899988999999999999999
Q ss_pred hhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhH
Q 011283 396 VKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGA 475 (489)
Q Consensus 396 ~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGA 475 (489)
++|||+|+|++|+|++++++..... ..++++|++|||+|++||.|++++++++++++.+. ..+|+|++++|||++||
T Consensus 158 ~~RAA~L~Aa~iaail~~~~~~~~~--~~~~v~VavDGSv~~~~p~f~~~l~~~l~~L~~~~-~~~v~~~~~~dgsg~GA 234 (243)
T PF03727_consen 158 STRAARLVAAAIAAILNKIRENKGR--PRREVTVAVDGSVYEKYPNFRERLQEALDELLPEE-GCKVEFVLSEDGSGVGA 234 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTC--SSEEEEEEEESHHHHHSTTHHHHHHHHHHHHSTT--CEEEEEEE-SSTHHHHH
T ss_pred HHHhHHHHHHHHHHHHHhhhccccc--cCCceEEEEeCcceeeCHHHHHHHHHHHHHhcccc-cceEEEEEecCchHHHH
Confidence 9999999999999999997532211 12468999999999999999999999999988764 56799999999999999
Q ss_pred HHHhhcccc
Q 011283 476 ALLASANSK 484 (489)
Q Consensus 476 A~~aa~~~~ 484 (489)
|++||++.|
T Consensus 235 Ai~AA~a~r 243 (243)
T PF03727_consen 235 AIAAAVACR 243 (243)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcC
Confidence 999999875
|
The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF00349 from PFAM. Some members of the family have two copies of each of these domains. This entry represents the more C-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4DHY_A 3ID8_A 4DCH_A 3FGU_A 3QIC_A 3A0I_X 3VEY_A 3IDH_A 3VEV_A 3VF6_A .... |
| >PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-53 Score=403.98 Aligned_cols=202 Identities=48% Similarity=0.778 Sum_probs=169.5
Q ss_pred cchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCC--CCcceeehhcccCcCCCccccEEEEecCCcceEEEEEE
Q 011283 31 SVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQ 108 (489)
Q Consensus 31 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~--s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~ 108 (489)
+.++.++++.++|.+|.++|++|+++|++||+.||+++.. ++++||||||+++|+|+|+|.|||||+|||||||++|+
T Consensus 2 ~~~~~v~~~~~~f~~s~~~L~~i~~~f~~em~~gL~~~~~~~~~l~MlPs~v~~~P~G~E~G~~LalDlGGTnlRv~~V~ 81 (206)
T PF00349_consen 2 DLQQAVQKLLQQFTLSDEQLQEISDRFLEEMEKGLAKSSSSMSSLKMLPSYVTSLPTGNEKGDFLALDLGGTNLRVALVE 81 (206)
T ss_dssp HHHHHHHHHHGGGS--HHHHHHHHHHHHHHHHHHHSTTTGCG-SS-EEEESEESSTTSTTEEEEEEEEESSSSEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHccCCCCceeeeccccccccCCCCCCCceEEEEeecCcEEEEEEEE
Confidence 4578899999999999999999999999999999997642 24999999999999999999999999999999999999
Q ss_pred eCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeee
Q 011283 109 LGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKW 188 (489)
Q Consensus 109 l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~w 188 (489)
+.|.+. .....++++||.+++.+++++||||||+||.+|+++++.. +.++.+++|||||||++|+++++|+|++|
T Consensus 82 L~g~~~--~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f~~~~~~~---~~~~~l~lGfTFSFP~~q~~~~~g~li~w 156 (206)
T PF00349_consen 82 LSGNGK--VEIEQEKYKIPEELMNGSGEELFDFIADCIAEFLKEHNLE---SRDEKLPLGFTFSFPVEQTSLNSGTLIRW 156 (206)
T ss_dssp EESSSE--EEEEEEEEE--HHHHTSBHHHHHHHHHHHHHHHHHHTTTT---STTSEEEEEEEEESSEEESSTTEEEE---
T ss_pred EcCCCC--ceeeeccccCChHHhcCCcccHHHHHHHHHHHHHHHhccc---ccccccceEEEEEEEEEeccCCCeEEEEe
Confidence 987642 2223347999999999999999999999999999987642 13678999999999999999999999999
Q ss_pred ccceeeecCCCchHHHHHHHHHHhcCcc-eEeeeeecccccccccccccc
Q 011283 189 TKGFSVSGTAGKDVVACLNEAMERQGLD-MRVSALVNDTVGTLAGARYWD 237 (489)
Q Consensus 189 tKgf~~~~~~G~dv~~lL~~al~~~~l~-v~v~ai~NDtvatlla~~~~~ 237 (489)
||||++++++|+|++++|+++|+|++++ |+|+||+||||||||+++|.+
T Consensus 157 tKgf~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVgTLla~~Y~~ 206 (206)
T PF00349_consen 157 TKGFDISGVVGKDVVELLQDALKRRGLPNVKVVAIVNDTVGTLLAGAYQD 206 (206)
T ss_dssp -TT---BTGTTSBHHHHHHHHHHHHTSSEEEEEEEE-HHHHHHHHHHTT-
T ss_pred eccccccCCCCCccchhHHHHHHHhcccCcceEEEEECCHHHhhhhhcCC
Confidence 9999999999999999999999999998 999999999999999999963
|
The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A .... |
| >PRK13310 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=257.35 Aligned_cols=284 Identities=20% Similarity=0.221 Sum_probs=214.9
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEE
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTF 171 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tf 171 (489)
+++||+|||++|++++++.|+ ++.+. +++.|. .+.+++.+.|.+.+.++....+ ....+|+++
T Consensus 2 ~lgidig~t~i~~~l~d~~g~---i~~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~~igia~ 64 (303)
T PRK13310 2 YYGFDIGGTKIELGVFNEKLE---LQWEE--RVPTPR----DSYDAFLDAVCELVAEADQRFG--------CKGSVGIGI 64 (303)
T ss_pred eEEEEeCCCcEEEEEECCCCc---EEEEE--EecCCC----cCHHHHHHHHHHHHHHHHhhcC--------CcceEEEeC
Confidence 799999999999999999874 55433 344442 2477889999998888764332 224699999
Q ss_pred eeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEec
Q 011283 172 SFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVILG 247 (489)
Q Consensus 172 SfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIlG 247 (489)
|+|++. +.|.+. ++ +.++|.+.|+.+.|++.+ ++|| .+.||+++++++|+|. +.++.+++.+|
T Consensus 65 pG~vd~---~~g~~~-~~---~~~~w~~~~l~~~l~~~~---~~pV---~ieNDa~aaalaE~~~g~~~~~~~~~~l~~g 131 (303)
T PRK13310 65 PGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL---GRDV---RLDNDANCFALSEAWDDEFTQYPLVMGLILG 131 (303)
T ss_pred CCcccC---CCCEEe-cc---CcccccCCcHHHHHHHHH---CCCe---EEeccHhHHHHHHhhhccccCCCcEEEEEec
Confidence 999975 345543 32 456678889999999988 8997 7999999999999884 56899999999
Q ss_pred CCcceeEEeeccccccccCCcCCCCCeeeeccc----c-----cccCCCcccccccccccccCCcchhhhhhhhchhhHH
Q 011283 248 TGTNACYVEQMDAIPKLQGNKSPSGRTIINTEW----G-----AFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLG 318 (489)
Q Consensus 248 TG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~----G-----~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLg 318 (489)
||++++++.+++.+++.++.++|.|||.++..- | ..| .|++ ++|+|.++|+..|.
T Consensus 132 tGiG~giv~~G~l~~G~~g~aGEiGH~~v~~~~~~~~g~~~~~~~C--------------~CG~--~gclE~~~S~~al~ 195 (303)
T PRK13310 132 TGVGGGLVFNGKPISGRSYITGEFGHMRLPVDALTLLGWDAPLRRC--------------GCGQ--KGCIENYLSGRGFE 195 (303)
T ss_pred CceEEEEEECCEEeeCCCCccccccceeecccccccccccCCCccC--------------CCCC--cchHHHhhcHHHHH
Confidence 999999999999999999999999999997431 1 012 4666 47999999999985
Q ss_pred HHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhc
Q 011283 319 EIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKR 398 (489)
Q Consensus 319 ei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~R 398 (489)
+.++... + . .++ ..++++. ++..+..|..++++
T Consensus 196 ~~~~~~~------~--------~------~~~-----------------~~~l~~~----------~~~gd~~a~~~~~~ 228 (303)
T PRK13310 196 WLYQHYY------G--------E------PLQ-----------------APEIIAL----------YYQGDEQAVAHVER 228 (303)
T ss_pred HHHHHhc------c--------C------CCC-----------------HHHHHHH----------HHcCCHHHHHHHHH
Confidence 5443210 0 0 000 1122332 22335889999999
Q ss_pred CCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhH
Q 011283 399 GGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGA 475 (489)
Q Consensus 399 aA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGA 475 (489)
+++++|.+|+++++.++| + .|++||++.+ .+.|.+.+++.+++...+.. ..++|+.+ +|++.+||
T Consensus 229 ~~~~la~~l~n~~~~ldP--------~--~IvlgG~~~~-~~~~~~~l~~~~~~~~~~~~-~~~~i~~s~~~~~a~~~GA 296 (303)
T PRK13310 229 YLDLLAICLGNILTIVDP--------H--LVVLGGGLSN-FDAIYEQLPKRLPRHLLPVA-RVPRIEKARHGDAGGVRGA 296 (303)
T ss_pred HHHHHHHHHHHHHHHcCC--------C--EEEECCcccC-hHHHHHHHHHHHHHHhcccc-cCceEEEcccCchHHHHhH
Confidence 999999999999999998 2 5889999988 78899999999987654332 35666655 68899999
Q ss_pred HHHhh
Q 011283 476 ALLAS 480 (489)
Q Consensus 476 A~~aa 480 (489)
|.++.
T Consensus 297 a~~~l 301 (303)
T PRK13310 297 AFLHL 301 (303)
T ss_pred HHHhh
Confidence 98764
|
|
| >TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=250.05 Aligned_cols=301 Identities=19% Similarity=0.194 Sum_probs=220.7
Q ss_pred EEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEe
Q 011283 93 YALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFS 172 (489)
Q Consensus 93 LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfS 172 (489)
|+||+|||++|++++++.|+ ++.+. +++.+ .+.+++++.|.+.|.+++++.+.. ..+...+|+++|
T Consensus 1 lgidig~t~~~~~l~d~~g~---i~~~~--~~~~~-----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gIgva~p 66 (318)
T TIGR00744 1 IGVDIGGTTIKLGVVDEEGN---ILSKW--KVPTD-----TTPETIVDAIASAVDSFIQHIAKV----GHEIVAIGIGAP 66 (318)
T ss_pred CEEEeCCCEEEEEEECCCCC---EEEEE--EeCCC-----CCHHHHHHHHHHHHHHHHHhcCCC----ccceEEEEEecc
Confidence 58999999999999999874 55432 23333 246789999999999999876532 145788999999
Q ss_pred eeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEecC
Q 011283 173 FPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVILGT 248 (489)
Q Consensus 173 fP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIlGT 248 (489)
+|++. .+|.+. |+- ..+|.+.|+.+.|++.+ ++|| .+.||+++++++|.|. +.++.+.+++||
T Consensus 67 G~vd~---~~g~~~-~~~---~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~~~alaE~~~g~~~~~~~~~~v~igt 133 (318)
T TIGR00744 67 GPVNR---QRGTVY-FAV---NLDWKQEPLKEKVEARV---GLPV---VVENDANAAALGEYKKGAGKGARDVICITLGT 133 (318)
T ss_pred ccccC---CCCEEE-ecC---CCCCCCCCHHHHHHHHH---CCCE---EEechHHHHHHHHHHhcccCCCCcEEEEEeCC
Confidence 99975 345433 321 22566789999999988 8897 7999999999999874 568899999999
Q ss_pred CcceeEEeeccccccccCCcCCCCCeeeecccc-cccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHH
Q 011283 249 GTNACYVEQMDAIPKLQGNKSPSGRTIINTEWG-AFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLK 327 (489)
Q Consensus 249 G~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G-~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~ 327 (489)
|+|++++.+++.+++.++.++|.|||.++.+ | .-| .|++ ++|+|.++|+..|.+.++.....
T Consensus 134 GiG~giv~~G~~~~G~~g~agEiGh~~v~~~-g~~~C--------------~cG~--~gclE~~~s~~al~~~~~~~~~~ 196 (318)
T TIGR00744 134 GLGGGIIINGEIRHGHNGVGAEIGHIRMVPD-GRLLC--------------NCGK--QGCIETYASATGLVRYAKRANAK 196 (318)
T ss_pred ccEEEEEECCEEeecCCCCCcccCceEeCCC-CCccc--------------CCCC--cchHHHHhCHHHHHHHHHHHhcc
Confidence 9999999999999999998999999999755 4 234 3666 47999999999995543321100
Q ss_pred HhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchh
Q 011283 328 MAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGI 407 (489)
Q Consensus 328 ~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~l 407 (489)
. ..++.+ ........ .....+++. ++..+..|..+++++++++|.+|
T Consensus 197 -------~--~~~~~~-----------~~~~~~~~---~~~~~i~~~----------~~~gD~~a~~i~~~~~~~L~~~i 243 (318)
T TIGR00744 197 -------P--ERAEVL-----------LALGDGDG---ISAKHVFVA----------ARQGDPVAVDSYREVARWAGAGL 243 (318)
T ss_pred -------c--cccchh-----------hcccccCC---CCHHHHHHH----------HHCCCHHHHHHHHHHHHHHHHHH
Confidence 0 000000 00000000 012233332 33345899999999999999999
Q ss_pred hHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhh
Q 011283 408 VSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 408 aaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
+++++.++| + .|+++|++....+.|.+.+++.+++...+.....++|+.+ ++++.+|||.++.
T Consensus 244 ~~~~~~~dP--------~--~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~Gaa~~~~ 309 (318)
T TIGR00744 244 ADLASLFNP--------S--AIVLGGGLSDAGDLLLDPIRKSYKRWLFGGARQVADIIAAQLGNDAGLVGAADLAR 309 (318)
T ss_pred HHHHHHhCC--------C--EEEECChhhhCcHHHHHHHHHHHHHHhhhcccCCcEEEEcccCCchhhHHHHHHHH
Confidence 999999998 2 5899999999999999999999987654433345666654 6889999998854
|
This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. |
| >PRK09698 D-allose kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=248.11 Aligned_cols=286 Identities=16% Similarity=0.169 Sum_probs=211.6
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeee
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIG 168 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG 168 (489)
.+++++||+|||++|++++++.|+ ++.+. +++.|.. .+.+ .++.+++.|.+++++.+ .+...+|
T Consensus 3 ~~~~lgidig~t~i~~~l~d~~g~---i~~~~--~~~~~~~---~~~~-~~~~l~~~i~~~~~~~~-------~~i~gig 66 (302)
T PRK09698 3 KNVVLGIDMGGTHIRFCLVDAEGE---ILHCE--KKRTAEV---IAPD-LVSGLGEMIDEYLRRFN-------ARCHGIV 66 (302)
T ss_pred ccEEEEEEcCCcEEEEEEEcCCCC---EEEEE--EeCCccc---cchH-HHHHHHHHHHHHHHHcC-------CCeeEEE
Confidence 467999999999999999999874 55432 3444422 2334 49999999999987643 2468899
Q ss_pred eEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc---cCceEEEEE
Q 011283 169 FTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW---DEDVMVAVI 245 (489)
Q Consensus 169 ~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~---~~~~~iglI 245 (489)
+++|+|++. +.+.++. +..+...+|.+.|+.+.|++++ ++|| .+.||+++++++|.+. +.++.+++.
T Consensus 67 ia~pG~vd~---~~g~i~~-~~~~~~~~~~~~~l~~~l~~~~---~~pv---~v~NDa~aaa~~E~~~~~~~~~~~~~v~ 136 (302)
T PRK09698 67 MGFPALVSK---DRRTVIS-TPNLPLTALDLYDLADKLENTL---NCPV---FFSRDVNLQLLWDVKENNLTQQLVLGAY 136 (302)
T ss_pred EeCCcceeC---CCCEEEe-cCCCCccccccCCHHHHHHHHh---CCCE---EEcchHhHHHHHHHHhcCCCCceEEEEE
Confidence 999999975 3454443 2222222678899999999988 8997 7999999999998763 456899999
Q ss_pred ecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHH
Q 011283 246 LGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVL 325 (489)
Q Consensus 246 lGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l 325 (489)
+|||+|++++.+++.+++.++.++|.|||.++.+ |..| .|+++ +|+|.++|+..|.+..+.
T Consensus 137 lgtGIG~giv~~G~~~~G~~g~agEiGh~~v~~~-~~~C--------------~CG~~--gclE~~~S~~al~~~~~~-- 197 (302)
T PRK09698 137 LGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDM-TQHC--------------GCGNP--GCLETNCSGMALRRWYEQ-- 197 (302)
T ss_pred ecCceEEEEEECCEEeeCCCCCccccCceEeeCC-Cccc--------------CCCCc--cchHhhcCHHHHHHHHHH--
Confidence 9999999999999999999998999999999755 3333 36775 799999999998443221
Q ss_pred HHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccc
Q 011283 326 LKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGA 405 (489)
Q Consensus 326 ~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa 405 (489)
. +. + .+ ..++++. .+| ..+++++++++|.
T Consensus 198 -~-------~~---~--------~~-----------------~~~l~~~-------~~~--------~~~~~~~~~~la~ 226 (302)
T PRK09698 198 -Q-------PR---D--------YP-----------------LSDLFVH-------AGD--------HPFIQSLLENLAR 226 (302)
T ss_pred -h-------cC---C--------CC-----------------HHHHHHH-------cCC--------HHHHHHHHHHHHH
Confidence 0 00 0 00 1112221 011 1366778889999
Q ss_pred hhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhC-cccccceEEEec---cCCcchhHHHHhh
Q 011283 406 GIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLG-TEISKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 406 ~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~-~~~~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
+|+++++.++| ..|++||++.+..+.|.+.+++.+++.+. +.....++|+.+ ++++.+|||.++.
T Consensus 227 ~l~~li~~ldP----------~~IvlgG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 295 (302)
T PRK09698 227 AIATSINLFDP----------DAIILGGGVMDMPAFPRETLIAMIQKYLRKPLPYEVVRFIYASSSDFNGAQGAAILAH 295 (302)
T ss_pred HHHHHHHHhCC----------CEEEEcCccccCchhHHHHHHHHHHHHccCccccCCcEEEECCcCCcccHHhHHHHHH
Confidence 99999999998 35899999999888889999999988764 222345666655 7889999998864
|
|
| >COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=247.52 Aligned_cols=295 Identities=20% Similarity=0.262 Sum_probs=216.9
Q ss_pred CccccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceee
Q 011283 87 NERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166 (489)
Q Consensus 87 ~E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~ 166 (489)
.+..++++||+|||+++++++++.|+ ++... +.++|... ..+++.+.|.+.++++++..+ . ....
T Consensus 3 ~~~~~~lgidIggt~i~~~l~d~~g~---~l~~~--~~~~~~~~---~~~~~~~~i~~~i~~~~~~~~-~------~~~~ 67 (314)
T COG1940 3 PEAMTVLGIDIGGTKIKVALVDLDGE---ILLRE--RIPTPTPD---PEEAILEAILALVAELLKQAQ-G------RVAI 67 (314)
T ss_pred ccCcEEEEEEecCCEEEEEEECCCCc---EEEEE--EEecCCCC---chhHHHHHHHHHHHHHHHhcC-C------cCce
Confidence 34567999999999999999999885 44432 34445431 235889999999999987653 1 2345
Q ss_pred eeeEEeeeccccccccce-eeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceE
Q 011283 167 IGFTFSFPVKQTSIDSGV-LIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVM 241 (489)
Q Consensus 167 lG~tfSfP~~q~~i~~g~-li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~ 241 (489)
+|+++++|.+. +++. +..+. +++.+.+.|+.+.|++.+ ++|| .|.||+|+++++|+|. +.+++
T Consensus 68 iGIgi~~pg~~---~~~~~~~~~~---~~~~~~~~~l~~~L~~~~---~~Pv---~veNDan~aalaE~~~g~~~~~~~~ 135 (314)
T COG1940 68 IGIGIPGPGDV---DNGTVIVPAP---NLGWWNGVDLAEELEARL---GLPV---FVENDANAAALAEAWFGAGRGIDDV 135 (314)
T ss_pred EEEEeccceec---cCCcEEeecC---CCCccccccHHHHHHHHH---CCCE---EEecHHHHHHHHHHHhCCCCCCCCE
Confidence 77777777654 2333 22221 333445679999999998 8998 7999999999999995 45799
Q ss_pred EEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHH
Q 011283 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIV 321 (489)
Q Consensus 242 iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~ 321 (489)
+++++|||++++++.+++.+++.++.++|.|||.++.... | .|++. +|+|.++|+..|-
T Consensus 136 ~~i~~gtGIG~giv~~g~l~~G~~g~age~Gh~~v~~~g~--c--------------~cG~~--GclE~~as~~al~--- 194 (314)
T COG1940 136 VYITLGTGIGGGIIVNGKLLRGANGNAGEIGHMVVDPDGE--C--------------GCGRR--GCLETYASGRAIL--- 194 (314)
T ss_pred EEEEEccceeEEEEECCEEeecCCCccccccceEECCCCc--c--------------CCCCC--CchHHhccHHHHH---
Confidence 9999999999999999999999999889999999997744 3 36774 7999999999994
Q ss_pred HHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCc
Q 011283 322 RRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401 (489)
Q Consensus 322 R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~ 401 (489)
|.+.... +..... . ....+++. +...+..|+.++++++.
T Consensus 195 ~~~~~~~-----------~~~~~~---~-----------------~~~~i~~~----------a~~gd~~a~~~~~~~~~ 233 (314)
T COG1940 195 RRAAEAL-----------ESEAGE---L-----------------TAKDIFEL----------AAAGDPLAKEVIERAAD 233 (314)
T ss_pred HHHHhhc-----------cccccC---c-----------------CHHHHHHH----------HHcCCHHHHHHHHHHHH
Confidence 4331110 000000 0 12234443 44455899999999999
Q ss_pred cccchhhHHHHhhhccCCcccccceeEEEecC-ccccchhHHHHHHHHHHHHhhCcccccceEEE---ec-cCCcchhHH
Q 011283 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDG-GLYEHYTQYRRYVHEAVTELLGTEISKNVVIE---HT-KDGSGIGAA 476 (489)
Q Consensus 402 l~aa~laaii~~~~~~~~~~~~~~~~~I~i~G-sv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~---~a-~Dgs~iGAA 476 (489)
++|.+|+++++.++| + .|+++| ++....+.+.+.+++.+...... ......+. .. ++++++|||
T Consensus 234 ~la~~ianl~~~~~P--------~--~IvigG~g~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~ga~ 302 (314)
T COG1940 234 YLARGLANLINLLDP--------E--VIVIGGGGVSALGDLLLPRLRKLLAKYLFP-PVLRPRIVEAALGGNDAGLIGAA 302 (314)
T ss_pred HHHHHHHHHHHhcCC--------C--eEEEECcccccchhHHHHHHHHHHHHhhcc-hhcccchhhhhcccccccchhHH
Confidence 999999999999998 2 577888 99999999999999988876543 11122222 23 799999999
Q ss_pred HHhhc
Q 011283 477 LLASA 481 (489)
Q Consensus 477 ~~aa~ 481 (489)
.++..
T Consensus 303 ~~~~~ 307 (314)
T COG1940 303 LLALL 307 (314)
T ss_pred HHHHH
Confidence 98764
|
|
| >PRK09557 fructokinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=245.31 Aligned_cols=284 Identities=15% Similarity=0.150 Sum_probs=209.6
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
.+|+||+|||++|++++++.|+ ++.+. +++.|. .+.+++.+.|++.+.++....+ ....+|++
T Consensus 1 ~~lgidig~t~~~~~l~d~~g~---i~~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gIgi~ 63 (301)
T PRK09557 1 MRIGIDLGGTKIEVIALDDAGE---ELFRK--RLPTPR----DDYQQTIEAIATLVDMAEQATG--------QRGTVGVG 63 (301)
T ss_pred CEEEEEECCCcEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHhhcC--------CceEEEec
Confidence 3799999999999999999874 55432 344442 2467888888888888765432 24679999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEe
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVIL 246 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIl 246 (489)
+|+|++. ++|.+... +...+.+.|+.+.|++++ ++|| .+.||+++++++|.+. +.++.+.+++
T Consensus 64 ~pG~vd~---~~g~i~~~----~~~~~~~~~l~~~l~~~~---~~pv---~~~NDa~aaA~aE~~~g~~~~~~~~~~l~i 130 (301)
T PRK09557 64 IPGSISP---YTGLVKNA----NSTWLNGQPLDKDLSARL---NREV---RLANDANCLAVSEAVDGAAAGKQTVFAVII 130 (301)
T ss_pred CcccCcC---CCCeEEec----CCccccCCCHHHHHHHHH---CCCE---EEccchhHHHHHHHHhcccCCCCcEEEEEE
Confidence 9999975 34554421 112235789999999998 7897 7999999999999874 5688999999
Q ss_pred cCCcceeEEeeccccccccCCcCCCCCeeeecc--------cccccCCCcccccccccccccCCcchhhhhhhhchhhHH
Q 011283 247 GTGTNACYVEQMDAIPKLQGNKSPSGRTIINTE--------WGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLG 318 (489)
Q Consensus 247 GTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E--------~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLg 318 (489)
|||++++++.+++.+++.++.++|.|||.++.. -|..| .|++ .+|+|.++|+.+|.
T Consensus 131 gtGiG~giv~~G~l~~G~~g~aGEiGH~~v~~~~~~~~~~~~g~~c--------------~cG~--~GclE~~~S~~al~ 194 (301)
T PRK09557 131 GTGCGAGVAINGRVHIGGNGIAGEWGHNPLPWMDEDELRYRNEVPC--------------YCGK--QGCIETFISGTGFA 194 (301)
T ss_pred ccceEEEEEECCEEEecCCCCCcccCceecccccccccccCCCCcC--------------CCCC--CCEEeEEEcHHHHH
Confidence 999999999999999999998999999998531 12112 4666 47999999999995
Q ss_pred HHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhc
Q 011283 319 EIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKR 398 (489)
Q Consensus 319 ei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~R 398 (489)
+.++... ... ++ ...+++. ++..+..|+.++++
T Consensus 195 ~~~~~~~--------------~~~------~~-----------------~~~l~~~----------~~~gd~~a~~~l~~ 227 (301)
T PRK09557 195 TDYRRLS--------------GKA------LK-----------------GSEIIRL----------VEEGDPVAELAFRR 227 (301)
T ss_pred HHHHHhc--------------cCC------CC-----------------HHHHHHH----------HHcCCHHHHHHHHH
Confidence 4333210 000 00 1123332 22345889999999
Q ss_pred CCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhH
Q 011283 399 GGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGA 475 (489)
Q Consensus 399 aA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGA 475 (489)
+++++|.+|+++++.++| ..|+++|++... +.|.+.+++.+++...+.. ..++|+.+ ++++.+||
T Consensus 228 ~~~~La~~l~~l~~~ldP----------~~IvlgG~~~~~-~~~~~~l~~~~~~~~~~~~-~~~~i~~s~~~~~a~~~GA 295 (301)
T PRK09557 228 YEDRLAKSLAHVINILDP----------DVIVLGGGMSNV-DRLYPTLPALLKQYVFGGE-CETPVRKALHGDSSGVRGA 295 (301)
T ss_pred HHHHHHHHHHHHHHHhCC----------CEEEEcCcccch-HHHHHHHHHHHHHHhcccc-cCCeEEEcccCCchhhhhh
Confidence 999999999999999998 258999999885 7788889999987654322 24566654 78899999
Q ss_pred HHHh
Q 011283 476 ALLA 479 (489)
Q Consensus 476 A~~a 479 (489)
|.++
T Consensus 296 a~~~ 299 (301)
T PRK09557 296 AWLW 299 (301)
T ss_pred hHhh
Confidence 9864
|
|
| >PRK05082 N-acetylmannosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=239.47 Aligned_cols=279 Identities=18% Similarity=0.195 Sum_probs=206.6
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEE
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTF 171 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tf 171 (489)
+|+||+|||++|++++++.|+ ++... +++.|.. .+.+++.+.|.+.+.++.. +...+|+++
T Consensus 3 ~lgvdig~~~i~~~l~dl~g~---i~~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~-----------~~~~igi~~ 63 (291)
T PRK05082 3 TLAIDIGGTKIAAALVGEDGQ---IRQRR--QIPTPAS---QTPEALRQALSALVSPLQA-----------QADRVAVAS 63 (291)
T ss_pred EEEEEECCCEEEEEEEcCCCc---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHhhh-----------cCcEEEEeC
Confidence 799999999999999999874 55432 3444432 3466788888888877642 135699999
Q ss_pred eeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc---cCceEEEEEecC
Q 011283 172 SFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW---DEDVMVAVILGT 248 (489)
Q Consensus 172 SfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~---~~~~~iglIlGT 248 (489)
|+|++. +....+ ...+.++|.+.|+.+.|++.+ ++|| .|.||+++.+++|.+. +.++.+.+.+||
T Consensus 64 pG~vd~-----~~~~~~-~~~~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~a~a~aE~~~g~~~~~~~~~l~ig~ 131 (291)
T PRK05082 64 TGIIND-----GILTAL-NPHNLGGLLHFPLVQTLEQLT---DLPT---IALNDAQAAAWAEYQALPDDIRNMVFITVST 131 (291)
T ss_pred cccccC-----CeeEEe-cCCCCccccCCChHHHHHHHh---CCCE---EEECcHHHHHHHHHHhcCCCCCCEEEEEECC
Confidence 999872 222111 122344667889999999888 8997 7999999999999874 567899999999
Q ss_pred CcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHH
Q 011283 249 GTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKM 328 (489)
Q Consensus 249 G~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~ 328 (489)
|+|++++.+++.+++.++.++|.|||.++.+ |..| .|+++ +|+|.|+|+.+|- |.+. ..
T Consensus 132 GiG~giv~~G~~~~G~~g~AGEiGh~~v~~~-g~~c--------------~CG~~--GclE~~~S~~al~---~~~~-~~ 190 (291)
T PRK05082 132 GVGGGIVLNGKLLTGPGGLAGHIGHTLADPH-GPVC--------------GCGRR--GCVEAIASGRAIA---AAAQ-GW 190 (291)
T ss_pred CcceEEEECCEEeeCCCCccccccceEecCC-CCCC--------------CCCCc--CchhhhcCHHHHH---HHHH-Hh
Confidence 9999999999999999999999999999855 4433 36774 7999999999993 3211 00
Q ss_pred hhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhh
Q 011283 329 AEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIV 408 (489)
Q Consensus 329 ~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~la 408 (489)
+ +. .+ ...+++. ++..++.|..+++++++++|.+|+
T Consensus 191 ------~----~~-------~~-----------------~~~i~~~----------~~~gd~~a~~~~~~~~~~la~~l~ 226 (291)
T PRK05082 191 ------L----AG-------CD-----------------AKTIFER----------AGQGDEQAQALINRSAQAIARLIA 226 (291)
T ss_pred ------h----cC-------CC-----------------HHHHHHH----------HHcCCHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00 1122222 222347889999999999999999
Q ss_pred HHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhh
Q 011283 409 SILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 409 aii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
++++.++| + .|+++|++.. .+.|.+.+++.+++.... ..++|+.+ ++++.+|||.++.
T Consensus 227 ~l~~~~dp--------e--~IvlgG~~~~-~~~~~~~i~~~l~~~~~~---~~~~i~~s~~~~~~~~~GAa~~~~ 287 (291)
T PRK05082 227 DLKATLDC--------Q--CVVLGGSVGL-AEGYLELVQAYLAQEPAI---YHVPLLAAHYRHDAGLLGAALWAQ 287 (291)
T ss_pred HHHHHhCC--------C--EEEEcCcccc-HHHHHHHHHHHHHhcccc---cCCeEEECccCCchhhhhHHHHhc
Confidence 99999998 3 5889999765 567889999999875221 14566655 6889999998753
|
|
| >PRK12408 glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=242.96 Aligned_cols=298 Identities=16% Similarity=0.095 Sum_probs=188.1
Q ss_pred CCCcccc-EEEEecCCcceEEEEEEeCCcc---ceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccC
Q 011283 85 TGNERGL-FYALDLGGTNFRVLRVQLGGQE---ERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLP 160 (489)
Q Consensus 85 ~G~E~G~-~LaIDlGGTnlRv~lV~l~g~~---~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~ 160 (489)
++-|++. ||++|+||||+|+++++.++.. ..+... +++ |+.. .+. +.+.+.+++++ .
T Consensus 10 ~~~~~~~~~L~~DIGGT~i~~al~d~~g~~~~~~~~~~~--~~~--~t~~----~~~----~~~~i~~~~~~-~------ 70 (336)
T PRK12408 10 VAVPRPESFVAADVGGTHVRVALVCASPDAAKPVELLDY--RTY--RCAD----YPS----LAAILADFLAE-C------ 70 (336)
T ss_pred ccCcccccEEEEEcChhhhheeEEeccCCccccccccce--eEe--cCCC----ccC----HHHHHHHHHhc-C------
Confidence 4455553 8999999999999999875531 012221 122 2211 122 33334555543 1
Q ss_pred CCceeeeeeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcc-eEeeeeeccccccccccccc---
Q 011283 161 QGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLD-MRVSALVNDTVGTLAGARYW--- 236 (489)
Q Consensus 161 ~~~~~~lG~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~-v~v~ai~NDtvatlla~~~~--- 236 (489)
.+...+||++++| +. ++|.+. .+ |++ |. .+.+.|++.+ ++| | .|+||++|++++|+|.
T Consensus 71 -~~~~~igIg~pG~-~~---~~g~v~-~~---nl~-w~--~~~~~l~~~~---~~~~V---~l~ND~naaa~gE~~~~~~ 132 (336)
T PRK12408 71 -APVRRGVIASAGY-AL---DDGRVI-TA---NLP-WT--LSPEQIRAQL---GLQAV---HLVNDFEAVAYAAPYMEGN 132 (336)
T ss_pred -CCcCEEEEEecCC-ce---ECCEEE-ec---CCC-Cc--cCHHHHHHHc---CCCeE---EEeecHHHHHcccccCCHh
Confidence 1346799999998 32 245554 22 222 32 2457777766 784 7 8999999999999876
Q ss_pred ----------cC-ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcch
Q 011283 237 ----------DE-DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGE 305 (489)
Q Consensus 237 ----------~~-~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~ 305 (489)
+. .+.+.+++|||+|++++.+++ .+.++.++|.|||.+... +.- +.+ .....|...+.
T Consensus 133 ~~~~~~g~~~~~~~~~~~i~~GTGiGggivi~g~--~g~~~~agE~GH~~~~~~-~~~-------~~~-l~~~~~~~~~~ 201 (336)
T PRK12408 133 QVLQLSGPAQAAAGPALVLGPGTGLGAALWIPNG--GRPVVLPTEAGQAALAAA-SEL-------EMQ-LLQHLLRTRTH 201 (336)
T ss_pred HeeeecCCCCCCCCcEEEEECCCcceEEEEEcCC--CceeeecCccccccCCCC-CHH-------HHH-HHHHHHhhCCc
Confidence 23 578999999999999999887 566666778888877432 100 000 00001333345
Q ss_pred hhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccc
Q 011283 306 QIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKAR 385 (489)
Q Consensus 306 ~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~ 385 (489)
+|+|.++||+.|.++.+..... .+ .. ...++ .+.+++. +
T Consensus 202 ~~~E~~~Sg~gL~~~~~~~~~~---~~--------~~---~~~~~-----------------~~~v~~~----------a 240 (336)
T PRK12408 202 VPIEHVLSGPGLLNLYRALCAL---RG--------AT---PVHAS-----------------PAAITAA----------A 240 (336)
T ss_pred eeHhheecHHHHHHHHHHHHhh---cC--------CC---cccCC-----------------HHHHHHH----------H
Confidence 7999999999997766653210 00 00 00011 1233332 1
Q ss_pred eee-eeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeE-EEecCccccc-hhHHHHH--HHHHHHHhhCccccc
Q 011283 386 KVV-IEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTV-VAMDGGLYEH-YTQYRRY--VHEAVTELLGTEISK 460 (489)
Q Consensus 386 ~~~-~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~-I~i~Gsv~~~-~~~f~~~--i~~~l~~~~~~~~~~ 460 (489)
+.. +..|..+++++++++|.++++++..++| .. |+++||++.. .+.|.+. +++.+++...+....
T Consensus 241 ~~ggD~~A~~~~~~~~~~La~~i~nl~~~ldP----------e~GIvIGGGIs~~~~~~l~~~~f~~~~~~~~~~~~~~~ 310 (336)
T PRK12408 241 LAGDDALAHEALQVFCGFLGSVVGDMALAYGA----------RGGVYLAGGILPQIADFLARSDFVERFLNKGPMRPALE 310 (336)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CceEEEECchhHhHHhhhcCHHHHHHHhccCchhhHhc
Confidence 222 4899999999999999999999999998 24 8899999876 5666664 777776653332233
Q ss_pred ceEEEec--cCCcchhHHHHhhc
Q 011283 461 NVVIEHT--KDGSGIGAALLASA 481 (489)
Q Consensus 461 ~v~i~~a--~Dgs~iGAA~~aa~ 481 (489)
.+.|+.+ .|++++|||.++..
T Consensus 311 ~~~I~~~~~~~agl~GAa~~~~~ 333 (336)
T PRK12408 311 QVPVKLVEHGQLGVLGAASWYLQ 333 (336)
T ss_pred CCCEEEEeCCChHHHHHHHHHHh
Confidence 4555544 58999999966543
|
|
| >PRK00292 glk glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-26 Score=230.93 Aligned_cols=290 Identities=14% Similarity=0.134 Sum_probs=184.5
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHh-hcCccccCCCceeeeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEK-EAGKFHLPQGRQREIGF 169 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~-~~~~~~~~~~~~~~lG~ 169 (489)
++|++|+||||+|++++++.+. .++... +++.+. . +.+.+.+.+++++ .+ .+...+||
T Consensus 3 ~~lgiDIGgT~i~~~l~~~~~~--~~~~~~--~~~~~~------~----~~~~~~l~~~l~~~~~-------~~~~gigI 61 (316)
T PRK00292 3 PALVGDIGGTNARFALCDWANG--EIEQIK--TYATAD------Y----PSLEDAIRAYLADEHG-------VQVRSACF 61 (316)
T ss_pred eEEEEEcCccceEEEEEecCCC--ceeeeE--EEecCC------C----CCHHHHHHHHHHhccC-------CCCceEEE
Confidence 5899999999999999997443 233321 233321 1 2244444555543 21 23578999
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcc-eEeeeeeccccccccccccc----------c-
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLD-MRVSALVNDTVGTLAGARYW----------D- 237 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~-v~v~ai~NDtvatlla~~~~----------~- 237 (489)
++|+|++...+... .+.| .. + .+.|++.+ ++| | .|+||+++++++|.+. .
T Consensus 62 g~pG~vd~~~i~~~-n~~w---------~~-~-~~~l~~~~---~~p~v---~l~ND~~aaalgE~~~~~~~~~~~g~~~ 123 (316)
T PRK00292 62 AIAGPVDGDEVRMT-NHHW---------AF-S-IAAMKQEL---GLDHL---LLINDFTAQALAIPRLGEEDLVQIGGGE 123 (316)
T ss_pred EEeCcccCCEEEec-CCCc---------cc-C-HHHHHHHh---CCCeE---EEEecHHHHHcccccCCHhheeEeCCCC
Confidence 99999974221111 1124 22 3 47777777 785 7 7999999999999752 1
Q ss_pred ---CceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhch
Q 011283 238 ---EDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISG 314 (489)
Q Consensus 238 ---~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG 314 (489)
.++.+.+++|||+|++++.++ +.+.++.++|.|||.++.. |.. +++.. ...|...+++|+|.++||
T Consensus 124 ~~~~~~~~~v~~GTGiG~giv~~g--~~g~~g~agE~GH~~~~~~-~~~-------~~~~~-~~~c~~~~~gclE~~~Sg 192 (316)
T PRK00292 124 PVPGAPIAVIGPGTGLGVAGLVPV--DGRWIVLPGEGGHVDFAPR-SEE-------EAQIL-QYLRAEFGHVSAERVLSG 192 (316)
T ss_pred CCCCCcEEEEEcCCcceEEEEEec--CCceEEccCCcccccCCCC-ChH-------HHHHH-HHHHHhcCCceeEeeecH
Confidence 368999999999999999987 6777777788999988533 221 00000 001222235799999999
Q ss_pred hhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeee-eehh
Q 011283 315 MYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVI-EVCD 393 (489)
Q Consensus 315 ~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~-~ia~ 393 (489)
+.|.++.+.... ..+ . ++ ..++ ..++++. ++..+ .+|+
T Consensus 193 ~~L~~~~~~~~~---~~~-----~-~~-----~~~~-----------------~~~i~~~----------a~~gdd~~A~ 231 (316)
T PRK00292 193 PGLVNLYRAICK---ADG-----R-EP-----ELLT-----------------PADITER----------ALAGSCPLCR 231 (316)
T ss_pred HhHHHHHHHHHh---hcC-----C-Cc-----ccCC-----------------HHHHHHH----------HHhCCChHHH
Confidence 999665543211 000 0 00 0001 1223333 33344 8999
Q ss_pred hhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCcccc-chhHHHH-HHHHHHHHhh-Cccc--ccceEEEecc
Q 011283 394 TIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYE-HYTQYRR-YVHEAVTELL-GTEI--SKNVVIEHTK 468 (489)
Q Consensus 394 ~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~-~~~~f~~-~i~~~l~~~~-~~~~--~~~v~i~~a~ 468 (489)
.+++++++++|.+++++++.++| + -.|+++||+.. ..+.|.+ .+++.+++.. .+.. ...+.+...+
T Consensus 232 ~~~~~~~~~lg~~i~~l~~~~~P--------~-~~vvi~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 302 (316)
T PRK00292 232 RTLSLFCVILGRVAGNLALTLGA--------R-GGVYIAGGIVPRFLEFFKASGFRAAFEDKGRFSAYLADIPVYVITHP 302 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--------C-ceEEEeCchHHhHHhhhccHHHHHHHhcCCChhhHHhcCCEEEEcCC
Confidence 99999999999999999999998 2 14778888884 6676666 5566666522 1211 2234456668
Q ss_pred CCcchhHHHHhh
Q 011283 469 DGSGIGAALLAS 480 (489)
Q Consensus 469 Dgs~iGAA~~aa 480 (489)
|++++|||.++.
T Consensus 303 ~agl~GAa~~~~ 314 (316)
T PRK00292 303 QPGLLGAGAYLR 314 (316)
T ss_pred ChHHHHHHHHHh
Confidence 999999988764
|
|
| >PRK13311 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=214.92 Aligned_cols=233 Identities=14% Similarity=0.115 Sum_probs=173.1
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
.|++||+|||++|++++++.++ ++.+. +++.|. .+.+++++.+.+.+.++..... ....+|++
T Consensus 1 ~~lgidiggt~i~~~l~d~~g~---i~~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gIgv~ 63 (256)
T PRK13311 1 MYYGFDMGGTKIELGVFDENLQ---RIWHK--RVPTPR----EDYPQLLQILRDLTEEADTYCG--------VQGSVGIG 63 (256)
T ss_pred CEEEEEECCCcEEEEEECCCCC---EEEEE--EecCCC----cCHHHHHHHHHHHHHHHHhhcC--------CCceEEEE
Confidence 3799999999999999999874 55433 345442 2466788888888877743221 23479999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEe
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVIL 246 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIl 246 (489)
+|+|++. +.|.+ .++ +.++|.+.|+++.|++.+ ++|| .+.||+++++++|.|. +.++.+++++
T Consensus 64 ~pG~vd~---~~g~i-~~~---~~~~w~~~~l~~~l~~~~---~~pV---~leNDanaaAlaE~~~g~~~~~~~~v~i~l 130 (256)
T PRK13311 64 IPGLPNA---DDGTV-FTA---NVPSAMGQPLQADLSRLI---QREV---RIDNDANCFALSEAWDPEFRTYPTVLGLIL 130 (256)
T ss_pred ecCcEEC---CCCEE-Ecc---CCCcccCCChHHHHHHHH---CCCE---EEEchhhHHHHHHHHhcCCCCCCcEEEEEE
Confidence 9999875 34544 343 456677889999999988 8897 8999999999999884 4689999999
Q ss_pred cCCcceeEEeeccccccccCCcCCCCCeee--ecc-------cccccCCCcccccccccccccCCcchhhhhhhhchhhH
Q 011283 247 GTGTNACYVEQMDAIPKLQGNKSPSGRTII--NTE-------WGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYL 317 (489)
Q Consensus 247 GTG~Na~yie~~~~i~~~~g~~~~~g~miI--n~E-------~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yL 317 (489)
|||++++++.+++.+++.++.++|.|||.+ +.+ -|..| .|++ .+|+|.++|+..|
T Consensus 131 gtGiG~giv~~G~l~~G~~g~AGEiGh~~v~~~~~~~~~~~~~~~~c--------------~cG~--~GclE~~~S~~ai 194 (256)
T PRK13311 131 GTGVGGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPRVPC--------------GCGH--RGCIENYISGRGF 194 (256)
T ss_pred CcCeEEEEEECCEEecCCCCCCccceeEEeccCcccccccCCCCCcC--------------CCCC--ccchhheecHHHH
Confidence 999999999999999999998999999998 321 02112 3566 4799999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhh
Q 011283 318 GEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVK 397 (489)
Q Consensus 318 gei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~ 397 (489)
.+..+. .. . . .++ ..++++. ++..++.|+.+++
T Consensus 195 ~~~~~~----~~------~----~------~~~-----------------~~~l~~~----------~~~gd~~a~~~~~ 227 (256)
T PRK13311 195 EWMYSH----FY------Q----H------TLP-----------------ATDIIAH----------YAAGEPKAVAHVE 227 (256)
T ss_pred HHHHHH----hc------c----C------CCC-----------------HHHHHHH----------HHcCCHHHHHHHH
Confidence 543321 00 0 0 000 1223332 2334589999999
Q ss_pred cCCccccchhhHHHHhhhc
Q 011283 398 RGGRLAGAGIVSILQKIDE 416 (489)
Q Consensus 398 RaA~l~aa~laaii~~~~~ 416 (489)
++++++|.+|+++++.+++
T Consensus 228 ~~~~~la~~i~nl~~~~~~ 246 (256)
T PRK13311 228 RFMDVLAVCLGNLLTMLGS 246 (256)
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999997
|
|
| >PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-21 Score=212.91 Aligned_cols=290 Identities=14% Similarity=0.134 Sum_probs=176.5
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
|.+|++|+||||+|+++++..|. +... .++|+.. |+.+.+.|.+++++.+. ..+..+||
T Consensus 18 ~~~L~iDIGGT~ir~al~~~~g~---i~~~----~~~~t~~--------~~~~~~~i~~~l~~~~~------~~~~~igi 76 (638)
T PRK14101 18 GPRLLADVGGTNARFALETGPGE---ITQI----RVYPGAD--------YPTLTDAIRKYLKDVKI------GRVNHAAI 76 (638)
T ss_pred CCEEEEEcCchhheeeeecCCCc---ccce----eEEecCC--------CCCHHHHHHHHHHhcCC------CCcceEEE
Confidence 55999999999999999976553 4332 2344321 24455666777664431 23578999
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccc--------ccc----c
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGA--------RYW----D 237 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~--------~~~----~ 237 (489)
++|+|++...+. ...+.|. .++ +.|++.+ ++|. +.|+||.+|+++++ .+. +
T Consensus 77 g~pGpVd~~~~~-~~nl~w~----------~~~-~~l~~~~---g~~~--v~l~ND~~aaA~ge~~l~~~e~~~~G~g~~ 139 (638)
T PRK14101 77 AIANPVDGDQVR-MTNHDWS----------FSI-EATRRAL---GFDT--LLVVNDFTALAMALPGLTDAQRVQVGGGTR 139 (638)
T ss_pred EEecCccCCeee-ecCCCcE----------ecH-HHHHHHc---CCCe--EEEEchHHHHHcCCccCCHHHeEEeCCCCC
Confidence 999999853221 1222352 255 6777766 7752 48999999999995 332 3
Q ss_pred CceEEEEEecCCccee---EE-eeccccccccCCcCCCCCeeeecccccccCCCccccccccc-ccccCCcchhhhhhhh
Q 011283 238 EDVMVAVILGTGTNAC---YV-EQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDM-DAASINPGEQIYEKTI 312 (489)
Q Consensus 238 ~~~~iglIlGTG~Na~---yi-e~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~-D~~s~~pg~~~~Ek~~ 312 (489)
.++.+.+++|||||.+ ++ .+++.+. .++|.|||.++.. +.....+ ...|++.|.+|+|.++
T Consensus 140 ~~~~~~~~lGtGTGlG~a~lv~~~g~~~~----~g~E~GH~~~~~~----------~~~e~~~~~~~~~~~g~~~~E~~~ 205 (638)
T PRK14101 140 RQNSVIGLLGPGTGLGVSGLIPADDRWIA----LGSEGGHASFAPQ----------DEREDLVLQYARKKYPHVSFERVC 205 (638)
T ss_pred CCCCcEEEEECCccceeeEEEecCCeeEE----CCCCccccCCCCC----------CHHHHHHHHHHHHhcCcceeeeec
Confidence 4677899987765554 43 5544221 1235566554321 1000000 0013344567999999
Q ss_pred chhhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeeh
Q 011283 313 SGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVC 392 (489)
Q Consensus 313 SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia 392 (489)
||+.|.++.|..... .+ . + .+..++ ..++++. ++..+.+|
T Consensus 206 Sg~gL~~~~~~~~~~---~~-----~-~----~~~~~~-----------------~~~i~~~----------a~~gd~~A 245 (638)
T PRK14101 206 AGPGMEIIYRALAAR---DK-----K-R----VAANVD-----------------TAEIVER----------AHAGDALA 245 (638)
T ss_pred chhhHHHHHHHHHhh---cC-----C-C----CcCcCC-----------------HHHHHHH----------HHCCCHHH
Confidence 999998777653211 00 0 0 000011 1234443 33345999
Q ss_pred hhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccch-hHHHH-HHHHHHHHhh--Ccc-cccceEEEec
Q 011283 393 DTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHY-TQYRR-YVHEAVTELL--GTE-ISKNVVIEHT 467 (489)
Q Consensus 393 ~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~-~~f~~-~i~~~l~~~~--~~~-~~~~v~i~~a 467 (489)
..+++++++++|.++++++..+++. ..|++|||+..+. +.|.+ .+.+.++..- ... ..-.|.++..
T Consensus 246 ~~~~~~~~~~lg~~~~nl~~~~~~p---------~~vvigGGIs~~~~~~l~~~~f~~~f~~kg~~~~~~~~ipv~~i~~ 316 (638)
T PRK14101 246 LEAVECFCAILGTFAGNLALTLGAL---------GGIYIGGGVVPKLGELFTRSSFRARFEAKGRFEAYLANIPTYLITA 316 (638)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC---------CcEEEeCcHHHHHHHHcChHHHHHHHHhCCChHHHHhcCCEEEEeC
Confidence 9999999999999999999999841 3589999998654 44442 4555554321 000 1235777888
Q ss_pred cCCcchhHHHHhh
Q 011283 468 KDGSGIGAALLAS 480 (489)
Q Consensus 468 ~Dgs~iGAA~~aa 480 (489)
++.+++|||..+.
T Consensus 317 ~~~~l~Gaa~~~~ 329 (638)
T PRK14101 317 EYPAFLGVSAILA 329 (638)
T ss_pred CChhHHHHHHHHH
Confidence 9999999976654
|
|
| >TIGR00749 glk glucokinase, proteobacterial type | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.6e-21 Score=193.19 Aligned_cols=291 Identities=13% Similarity=0.099 Sum_probs=169.8
Q ss_pred EEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEe
Q 011283 93 YALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFS 172 (489)
Q Consensus 93 LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfS 172 (489)
|++|+||||+|+++++..+. ++.. .+.++. +.++.+.+.|.+++++.+... .......||+.+
T Consensus 1 l~~DIGGT~i~~glvd~~g~---~l~~----~~~~~~-------~~~~~l~~~i~~~l~~~~~~~---~~~~~~~~Igi~ 63 (316)
T TIGR00749 1 LVGDIGGTNARLALCEIAPG---EISQ----AKTYSG-------LDFPSLEAVVRVYLEEHKVEL---KDPIAKGCFAIA 63 (316)
T ss_pred CeEecCcceeeEEEEecCCC---ceee----eEEEec-------CCCCCHHHHHHHHHHhccccc---CCCcCeEEEEEe
Confidence 68999999999999987553 2321 111111 124555566666665432110 012356899999
Q ss_pred eeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCc-ceEeeeeecccccccccc--------ccc----cCc
Q 011283 173 FPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGL-DMRVSALVNDTVGTLAGA--------RYW----DED 239 (489)
Q Consensus 173 fP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l-~v~v~ai~NDtvatlla~--------~~~----~~~ 239 (489)
+|++...+. ...+.|. .++. .|++.+ ++ || .|+||++|++++| +|. +.+
T Consensus 64 Gpv~~~~v~-~~nl~w~----------~~~~-~l~~~~---g~~~V---~l~ND~naaa~ge~~l~~~~~~~~g~~~~~~ 125 (316)
T TIGR00749 64 CPITGDWVA-MTNHTWA----------FSIA-ELKQNL---GFSHL---EIINDFTAVSYAIPGLKKEDLIQFGGAEPVE 125 (316)
T ss_pred CcccCCEEE-ecCCCCe----------eCHH-HHHHhc---CCCeE---EEEecHHHHHcCCCCCCHHHeEEeCCCCCCC
Confidence 998532111 1122342 3674 777766 77 47 7999999999998 653 456
Q ss_pred eEEEEEecCCcceeE--Ee---eccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhch
Q 011283 240 VMVAVILGTGTNACY--VE---QMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISG 314 (489)
Q Consensus 240 ~~iglIlGTG~Na~y--ie---~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG 314 (489)
+.+.+++|||||.+. +. +++.+ +.++|.|||.+... +.-. . .+...+...| +++|+|.++||
T Consensus 126 ~~~~v~lGtGtG~G~~~vi~~~~g~l~----~~agE~GH~~~~~~-~~~~--~---~~~~~l~~~~---~~g~~E~~~Sg 192 (316)
T TIGR00749 126 GKPIAILGAGTGLGVAHLIHQVDGRWV----VLPGEGGHVDFAPN-SELE--A---IILEYLRAKI---GHVSAERVLSG 192 (316)
T ss_pred CCcEEEEecCCCceeeEEEEcCCCCEE----ECCCCcccccCCCC-CHHH--H---HHHHHHHHhc---CCceeeeeecH
Confidence 789999966666664 66 55543 34568888877421 1000 0 0000000123 35799999999
Q ss_pred hhHHHHHHHHHHHHhhhccccCCCcccccc--ccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeee-ee
Q 011283 315 MYLGEIVRRVLLKMAEEGALFGNSVPEKLS--MPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVI-EV 391 (489)
Q Consensus 315 ~yLgei~R~~l~~~~~~~~lf~~~~~~~l~--~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~-~i 391 (489)
+.|.++.|..... .+. .... ....+ ..+.+++. ++..+ .+
T Consensus 193 ~gl~~~~~~~~~~---~~~-------~~~~~~~~~~~-----------------~~~~I~~a----------a~~Gdd~~ 235 (316)
T TIGR00749 193 PGLVNIYEALVKA---DPE-------RQFNKLPQENL-----------------KPKDISER----------ALAGSCTD 235 (316)
T ss_pred HHHHHHHHHHHhh---cCc-------ccccccccccC-----------------CHHHHHHH----------HHcCCCHH
Confidence 9998777754311 010 0000 00001 12334443 34454 89
Q ss_pred hhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHH-HHHHHHHHh--hCcc-cccceEEEec
Q 011283 392 CDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRR-YVHEAVTEL--LGTE-ISKNVVIEHT 467 (489)
Q Consensus 392 a~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~-~i~~~l~~~--~~~~-~~~~v~i~~a 467 (489)
|..+++++++++|.+++++++.++| +..+++.||.+.+..+.+.+ .+.+.+++. .... ..-.|.++..
T Consensus 236 A~~~~~~~~~~lg~~i~nl~~~ldp--------eggv~v~GG~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~pv~~i~~ 307 (316)
T TIGR00749 236 CRRALSLFCVIYGRFAGNLALNLGT--------RGGVYIAGGIVPRFIEFFKASGFRAAFEDKGRMKEYVHDIPVYVVLH 307 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC--------CCcEEEECcHHHhHHhhhCchHHHHHHhccCChhHHHhhCCEEEEcC
Confidence 9999999999999999999999998 21234444444454455444 344444321 0000 1124777788
Q ss_pred cCCcchhHH
Q 011283 468 KDGSGIGAA 476 (489)
Q Consensus 468 ~Dgs~iGAA 476 (489)
++.+++|||
T Consensus 308 ~~~~l~G~~ 316 (316)
T TIGR00749 308 DNPGLLGAG 316 (316)
T ss_pred CCccccCCC
Confidence 999999995
|
This model represents glucokinase of E. coli and close homologs, mostly from other proteobacteria, presumed to have equivalent function. This glucokinase is more closely related to a number of uncharacterized paralogs than to the glucokinase glcK (fromerly yqgR) of Bacillus subtilis and its closest homologs, so the two sets are represented by separate models. |
| >PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames [] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-20 Score=173.14 Aligned_cols=175 Identities=23% Similarity=0.336 Sum_probs=141.7
Q ss_pred EEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEee
Q 011283 94 ALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSF 173 (489)
Q Consensus 94 aIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSf 173 (489)
+||+|+|.++++++++.|+ ++.+. ++++| .+.+++++.+.+.+.+++.+.+ .. .+|+++|+
T Consensus 1 gidig~~~i~~~l~d~~g~---ii~~~--~~~~~-----~~~~~~~~~l~~~i~~~~~~~~--------~~-gIgi~~pG 61 (179)
T PF00480_consen 1 GIDIGGTSIRIALVDLDGE---IIYSE--SIPTP-----TSPEELLDALAELIERLLADYG--------RS-GIGISVPG 61 (179)
T ss_dssp EEEEESSEEEEEEEETTSC---EEEEE--EEEHH-----SSHHHHHHHHHHHHHHHHHHHT--------CE-EEEEEESS
T ss_pred CEEECCCEEEEEEECCCCC---EEEEE--EEECC-----CCHHHHHHHHHHHHHHHHhhcc--------cc-cEEEeccc
Confidence 6999999999999999885 66543 34444 3578999999999999988764 12 89999999
Q ss_pred eccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEecCC
Q 011283 174 PVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVILGTG 249 (489)
Q Consensus 174 P~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIlGTG 249 (489)
|++. +++.++... .++|.+.|+.+.|++.+ ++|| .++||++++++++.+. +.++.+.+.+|||
T Consensus 62 ~v~~---~~g~i~~~~----~~~~~~~~l~~~l~~~~---~~pv---~i~Nd~~~~a~ae~~~~~~~~~~~~~~l~ig~G 128 (179)
T PF00480_consen 62 IVDS---EKGRIISSP----NPGWENIPLKEELEERF---GVPV---IIENDANAAALAEYWFGAAKDCDNFLYLYIGTG 128 (179)
T ss_dssp EEET---TTTEEEECS----SGTGTTCEHHHHHHHHH---TSEE---EEEEHHHHHHHHHHHHSTTTTTSSEEEEEESSS
T ss_pred cCcC---CCCeEEecC----CCCcccCCHHHHhhccc---ceEE---EEecCCCcceeehhhcCccCCcceEEEEEeecC
Confidence 9986 335555332 15677899999999998 7898 8999999999999873 4679999999999
Q ss_pred cceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhH
Q 011283 250 TNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYL 317 (489)
Q Consensus 250 ~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yL 317 (489)
++++++.+++.+.+.++.+++.|||.++.+ |.-| .|++ ++|+|.++|+++|
T Consensus 129 iG~~ii~~g~i~~G~~~~aGeigh~~~~~~-~~~c--------------~cG~--~GClE~~~S~~Al 179 (179)
T PF00480_consen 129 IGAGIIINGKIYRGSNGFAGEIGHMPVDPN-GEPC--------------YCGN--RGCLETYASGRAL 179 (179)
T ss_dssp EEEEEEETTEEETTTTS-TTGGGGSBSSTT-SSB---------------TTSS--BSBHHHHHSHHHH
T ss_pred CCcceecccccccCCCccccceeeeeccCC-CCcC--------------CCCC--cCcHHHhhChhhC
Confidence 999999999999998888899999999855 4333 3666 4899999999886
|
This family, known as ROK (Repressor, ORF, Kinase) includes the xylose operon repressor, xylR, from Bacillus subtilis, Lactobacillus pentosus and Staphylococcus xylosus; N-acetylglucosamine repressor, nagC, from Escherichia coli; glucokinase 2.7.1.2 from EC from Streptomyces coelicolor; fructokinase 2.7.1.4 from EC from Pediococcus pentosaceus, Streptococcus mutans and Zymomonas mobilis; allokinase 2.7.1.55 from EC and mlc from E. coli; and E. coli hypothetical proteins yajF and yhcI and the corresponding Haemophilus influenzae proteins. The repressor proteins (xylR and nagC) from this family possess an N-terminal region not present in the sugar kinases and which contains an helix-turn-helix DNA-binding motif.; PDB: 2GUP_A 3LM2_B 3EO3_A 2YHY_A 2YHW_A 2YI1_A 3MCP_A 1Z05_A 3HTV_A 3OHR_A .... |
| >PTZ00288 glucokinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-15 Score=158.70 Aligned_cols=314 Identities=16% Similarity=0.067 Sum_probs=175.6
Q ss_pred cEEEEecCCcceEEEEEEeC--Cccceeeeccccccccc-chhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 91 LFYALDLGGTNFRVLRVQLG--GQEERVQATEFEQVSIP-QELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~--g~~~~i~~~~~~~~~ip-~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
++++.|+||||.|+++.+.. +.. .+... .++.+ +. .+..++.+++.+.++.+.+.... ...+...
T Consensus 27 ~~~~~DiGgt~~R~~~~~~~~~~~~-~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~a 94 (405)
T PTZ00288 27 IFVGCDVGGTNARVGFAREVQHDDS-GVHII---YVRFNVTK---TDIRELLEFFDEVLQKLKKNLSF-----IQRVAAG 94 (405)
T ss_pred eEEEEEecCCceEEEEEeccCCCCC-ceeEE---EEeccccc---ccHHHHHHHHHHHHHHHHhcCcc-----ccCcCeE
Confidence 68999999999999999972 221 12221 23444 22 34556777777766666543210 0233446
Q ss_pred eeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccccc------------
Q 011283 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARY------------ 235 (489)
Q Consensus 168 G~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~------------ 235 (489)
.|.+++|+....+ .|...+|.....+++ .+. .+ | +++ -+.++||=.|..++-..
T Consensus 95 ~iAvAGPV~~~~~-~~~~~~~~~~~~lTN---lpw--~i---~---~~~--~~~liNDfeA~aygi~~l~~~~~~~~~f~ 160 (405)
T PTZ00288 95 AISVPGPVTGGQL-AGPFNNLKGIARLTD---YPV--EL---F---PPG--RSALLNDLEAGAYGVLAVSNAGRLSEYFK 160 (405)
T ss_pred EEEEeCceeCCEe-eccccccccccccCC---CCc--hh---c---CCC--eEEEEEhHHHHhCcccccChhhccccccc
Confidence 7888999853211 234467764444443 221 11 2 432 24799998888776432
Q ss_pred --------------------ccCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCC-Cccccccc
Q 011283 236 --------------------WDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG-LPLTEFDR 294 (489)
Q Consensus 236 --------------------~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~-lp~t~~D~ 294 (489)
.+..+.+.+.+|||+|+|++.+.+.+.++...++|.||+.++.--+.-|.+ ..+ |..
T Consensus 161 ~~~~~~~~~~l~~~~~~g~~~~~~~~~Vlg~GTGLG~alli~~~l~~G~~~~agEgGHv~~~~~~~~~~~~g~~l--~~~ 238 (405)
T PTZ00288 161 VMWKGTQWDALSEGKPAGSVIGRGRCMVLAPGTGLGSSLIHYVGVSDQYIVIPLECGHLSISWPANEDSDYVQAL--AGY 238 (405)
T ss_pred ccccccceeeecCCCCCcccCCCCCEEEEEeccceeEEEEECCeecCCcccccccccceeeccCCCCccchhHHH--HHH
Confidence 123456899999999999999988777777777888888874211110100 000 000
Q ss_pred cccccc---C--CcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhh
Q 011283 295 DMDAAS---I--NPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVG 369 (489)
Q Consensus 295 ~~D~~s---~--~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~ 369 (489)
+.... + +...-|+|.++||+.|.++.+... ... .+. .+.. ...
T Consensus 239 -l~~~~~~~g~~~~~~vs~E~v~SG~GL~~ly~~l~----~~~------~~~-------~~~~--------------~~a 286 (405)
T PTZ00288 239 -LASKALSKGIDSTVYPIYEDIVSGRGLEFNYAYEK----RGN------KPS-------APLK--------------EAA 286 (405)
T ss_pred -HHhhhccccccccCceeEeEEecHHHHHHHHHHHh----ccC------CCc-------cCcC--------------CHH
Confidence 00000 0 000238999999999977666421 100 000 0000 011
Q ss_pred hhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccc-hhHHHH----
Q 011283 370 STLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEH-YTQYRR---- 444 (489)
Q Consensus 370 ~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~-~~~f~~---- 444 (489)
++.+. . ....+..|..+++++++++|.++.+++..++| + .|.++||+..+ .+.|.+
T Consensus 287 ~ia~~-----A----~~~gD~~A~~al~~f~~~LG~~~~nlal~l~P--------~--~VvIgGGi~~~~~~~l~~~~~~ 347 (405)
T PTZ00288 287 EVAKL-----A----KYGSDVAAVKAMKRHYKYLMRLAAEISMQFLP--------L--TVVLMGDNIVYNSFFFDNPENV 347 (405)
T ss_pred HHHHH-----H----HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEECccHHhhHHHHhccchH
Confidence 22221 0 00124789999999999999999999999998 3 26666655444 343331
Q ss_pred -HHHHHHHHhh-C-cccccc--eEE-EeccCCcchhHHHHhhccc
Q 011283 445 -YVHEAVTELL-G-TEISKN--VVI-EHTKDGSGIGAALLASANS 483 (489)
Q Consensus 445 -~i~~~l~~~~-~-~~~~~~--v~i-~~a~Dgs~iGAA~~aa~~~ 483 (489)
.++......- + .+..+. |.+ +...+-+++|||..+....
T Consensus 348 ~f~~~f~~~~k~~r~~~l~~ipv~~qv~~~~~gL~Gaa~~a~~~~ 392 (405)
T PTZ00288 348 KQLQARITEHKMERLKFLSRTTFLRQKKSVNLNLLGCLQFGSQLS 392 (405)
T ss_pred HHHHHHHhcCccChHHHHhcCceEEEEeCCCccHHHHHHHHHHhh
Confidence 2222211000 0 111122 333 5568999999998887543
|
|
| >KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.4e-10 Score=107.10 Aligned_cols=309 Identities=18% Similarity=0.255 Sum_probs=184.9
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeecc----cccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCce
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATE----FEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQ 164 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~----~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~ 164 (489)
.+.|.+||=|+|--|+.+|+..++ +..+. ...|-++ .+..-+.|++.|.+...+.+.+. ....
T Consensus 2 ~~~y~GvEGgaT~s~~Vivd~~~~---~~~~a~~~~Tnh~~ig-------~~~~~~rie~~i~~A~~k~g~d~---~~~l 68 (336)
T KOG1794|consen 2 KDFYGGVEGGATCSRLVIVDEDGT---ILGRAVGGGTNHWLIG-------STTCASRIEDMIREAKEKAGWDK---KGPL 68 (336)
T ss_pred CceeEeecCCcceeEEEEECCCCC---EeeEeeccccccccCC-------chHHHHHHHHHHHHHHhhcCCCc---cCcc
Confidence 468999999999999999997664 33221 0123333 33556777777777777766432 1235
Q ss_pred eeeeeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEE
Q 011283 165 REIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAV 244 (489)
Q Consensus 165 ~~lG~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~igl 244 (489)
..+|+++|+. +|.. .+.++++.|++.+.. + ++=.+|.||+.+++.+. +.+...=|.|
T Consensus 69 r~lgL~lSg~-d~e~------------------~~~~lv~~~R~~fps--~-ae~~~v~sDa~~sl~a~-t~g~~~GiVL 125 (336)
T KOG1794|consen 69 RSLGLGLSGT-DQED------------------KNRKLVTEFRDKFPS--V-AENFYVTSDADGSLAAA-TPGGEGGIVL 125 (336)
T ss_pred ceeeeecccC-Cchh------------------HHHHHHHHHHHhccc--h-hheeeeehhHHHHHhhc-CCCCCCcEEE
Confidence 7899999887 6522 134667777775531 1 12248999999999885 5556677899
Q ss_pred EecCCcceeEEeeccccccccCCcCCCCCeeeecccc-cc-cCCCcccccccccccccCCcchhhhhhhhchhhHHHHHH
Q 011283 245 ILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWG-AF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVR 322 (489)
Q Consensus 245 IlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G-~f-~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R 322 (489)
|-|||+|+-.+.+..... .++..|||+=+ || .| +. +|-+-..+|+.-+ ||.|. --+..+..
T Consensus 126 iaGTgs~crl~~~DGs~~----~~ggwg~~iGd--~GSaywia---~~Avq~vfda~dg------~e~~~--~~i~~v~~ 188 (336)
T KOG1794|consen 126 IAGTGSNCRLVNPDGSEK----GAGGWGHMIGD--GGSAYWIA---RQAVQMVFDAEDG------FENMM--DKIKDVKQ 188 (336)
T ss_pred EecCCceeEEECCCCCcc----CCCCCCCccCC--Ccchhhhh---hhhhhheeehhcC------ccccc--chHHHHHH
Confidence 999999987776544322 23456778764 44 44 32 2222222332211 22221 11111122
Q ss_pred HHHHHHhhhccccCCCccccccccccccCcccccccccC-chhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCc
Q 011283 323 RVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDY-SEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401 (489)
Q Consensus 323 ~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~-~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~ 401 (489)
.++.++ . +++++..- ...-++- -+.+......+. +.+++++++++.|+++|+.
T Consensus 189 tif~~~-------~--l~d~l~ml--------~~~Ys~f~k~riA~f~~kla---------~~ae~Gd~~~~~ifr~Ag~ 242 (336)
T KOG1794|consen 189 TIFKHF-------N--LRDRLQML--------EHLYSDFDKHRIALFTEKLA---------EHAEIGDPLSAEIFRNAGE 242 (336)
T ss_pred HHHHHc-------C--CCCHHHHH--------HHHHhcchHHHHHHHHHHHH---------hhhhccCHHHHHHHHHHHH
Confidence 222221 1 12111100 0000000 000111111121 2356677999999999999
Q ss_pred cccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhc
Q 011283 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASA 481 (489)
Q Consensus 402 l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~ 481 (489)
.+|--+.|++..+.|.... ....-|+.-|||+.+++.+.+-....+... ..-.++++..-.+.|.+|||++||-
T Consensus 243 ~Lg~~V~aVl~~l~~~~k~---g~~l~Iv~vG~V~~Sw~~l~~Gfl~sls~~---~~f~~~~l~~~k~ssAvgAA~laa~ 316 (336)
T KOG1794|consen 243 TLGRHVVAVLPQLPPTLKK---GKTLPIVCVGGVFDSWDLLQEGFLDSLSDT---RGFERVELYRPKESSAVGAAILAAS 316 (336)
T ss_pred HHHHHHHHHHhhcCchhcc---cCcceEEEEcchhhHHHHHHHHHHHHhhcc---cCccceEEEeecccchHHHHHHhhh
Confidence 9999999999999874321 012348999999999998877777666552 1224678888889999999999985
Q ss_pred c
Q 011283 482 N 482 (489)
Q Consensus 482 ~ 482 (489)
.
T Consensus 317 ~ 317 (336)
T KOG1794|consen 317 L 317 (336)
T ss_pred h
Confidence 4
|
|
| >PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2 | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.3e-11 Score=119.58 Aligned_cols=292 Identities=18% Similarity=0.182 Sum_probs=158.1
Q ss_pred EEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEe
Q 011283 93 YALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFS 172 (489)
Q Consensus 93 LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfS 172 (489)
|+-|+||||.|+++++..+...++.... +|+ . .+...|.+.|.+.+++.- .+. ..+....|++.
T Consensus 1 Lv~DIGGTn~Rlal~~~~~~~~~~~~~~--~~~--~----~~~~s~~~~l~~~l~~~~--~~~------~~p~~~~iavA 64 (316)
T PF02685_consen 1 LVADIGGTNTRLALAEPDGGPLQLIDIR--RYP--S----ADFPSFEDALADYLAELD--AGG------PEPDSACIAVA 64 (316)
T ss_dssp EEEEEETTEEEEEEEECTCGG-EEEEEE--EEE--G----CCCCHHHHHHHHHHHHTC--HHH------TCEEEEEEEES
T ss_pred CeEEeCcccEEEEEEEcCCCCccccccE--EEe--c----CCcCCHHHHHHHHHHhcc--cCC------CccceEEEEEe
Confidence 6789999999999999866431222221 222 1 223345555555444331 110 24566899999
Q ss_pred eeccccccccceee--eeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc--------------
Q 011283 173 FPVKQTSIDSGVLI--KWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW-------------- 236 (489)
Q Consensus 173 fP~~q~~i~~g~li--~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~-------------- 236 (489)
+|+.. ++..+. .|+ + + .+.|++.| +++ -+.++||=.|..++--..
T Consensus 65 GPV~~---~~~~lTN~~W~----i------~-~~~l~~~l---g~~--~v~liNDfeA~a~gl~~L~~~~l~~l~~g~~~ 125 (316)
T PF02685_consen 65 GPVRD---GKVRLTNLPWT----I------D-ADELAQRL---GIP--RVRLINDFEAQAYGLPALDPEDLVTLQPGEPD 125 (316)
T ss_dssp S-EET---TCEE-SSSCCE----E------E-HHHCHCCC---T-T--CEEEEEHHHHHHHHHHHHHHCCECCHCCEESS
T ss_pred cCccC---CEEEecCCCcc----c------c-HHHHHHHh---CCc--eEEEEcccchheeccCCCCHHHeeeccCCCCC
Confidence 99974 233333 453 2 2 23333333 564 247999998887763321
Q ss_pred cCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCccccccccccc-ccCCcchhhhhhhhchh
Q 011283 237 DEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDA-ASINPGEQIYEKTISGM 315 (489)
Q Consensus 237 ~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~-~s~~pg~~~~Ek~~SG~ 315 (489)
.....+-+=.|||.|.|++.+.. .+..++-+|.||-. .-|+++.+..+=. -...-+.=.+|..+||+
T Consensus 126 ~~~~~~Vig~GTGLG~a~l~~~~-----------~~~~v~~sEgGH~~-fap~~~~e~~l~~~l~~~~~~vs~E~vlSG~ 193 (316)
T PF02685_consen 126 PGGPRAVIGPGTGLGVALLVPDG-----------DGYYVLPSEGGHVD-FAPRTDEEAELLRFLRRRYGRVSVERVLSGR 193 (316)
T ss_dssp TTS-EEEEEESSSEEEEEEEEET-----------TEEEEEEE-GGGSB----SSHHHHHHHHHHHHHCTS-BHHHCSSHH
T ss_pred CCCcEEEEEcCCCcEEEEEEecC-----------CceEeCCCcccccc-CCCCCHHHHHHHHHHHHhcCCceeEeecchh
Confidence 23455666789999999999743 24568999999872 2355554433211 00011233789999999
Q ss_pred hHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhh
Q 011283 316 YLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTI 395 (489)
Q Consensus 316 yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V 395 (489)
.|..+.+-.. ... + .++.. . ...+|.+.- .+--+.+|...
T Consensus 194 GL~~ly~~l~----~~~----~-~~~~~-----~-----------------~~~~I~~~A---------~~~~d~~a~~a 233 (316)
T PF02685_consen 194 GLENLYRFLA----GER----G-AEPPL-----L-----------------SAAEISAAA---------LEGGDPLAREA 233 (316)
T ss_dssp HHHHHHHHHH----CCT----T---S--------------------------HHHHHHHH---------HCT--HHHHHH
T ss_pred hHHHHHHHHH----hcc----C-CCCCC-----C-----------------CHHHHHHHH---------HcCCCHHHHHH
Confidence 9977665322 110 0 00000 0 112233220 01124899999
Q ss_pred hhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHH--HHHHHHHHh-hCccc--ccceEEEeccCC
Q 011283 396 VKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRR--YVHEAVTEL-LGTEI--SKNVVIEHTKDG 470 (489)
Q Consensus 396 ~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~--~i~~~l~~~-~~~~~--~~~v~i~~a~Dg 470 (489)
++...+++|.....+.-.+.+. --|=+.||+..+...+.+ ...+.+... -..+. .-.|.++..++.
T Consensus 234 l~~f~~~lg~~agdlaL~~~a~---------gGvyiaGGI~~~~~~~l~~~~F~~~F~~kg~~~~~l~~iPv~li~~~~~ 304 (316)
T PF02685_consen 234 LDLFARILGRVAGDLALTFLAR---------GGVYIAGGIAPRLLPLLDESAFREAFEDKGRMSDLLEDIPVYLITDPDA 304 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-T---------CEEEEE-TTGGGGHHHHHCSSHHHHHH--GGGHHHHTT--EEEE--S-H
T ss_pred HHHHHHHHHHHHHHHHHHhCCC---------eeEEEecchhhHHHHHcChhHHHHHHhccCCcHHHHhcCcEEEEeCCCH
Confidence 9999999999999998888772 237789999887765544 122222111 00000 124667778999
Q ss_pred cchhHHHHhh
Q 011283 471 SGIGAALLAS 480 (489)
Q Consensus 471 s~iGAA~~aa 480 (489)
+++|||..+.
T Consensus 305 gL~Gaa~~a~ 314 (316)
T PF02685_consen 305 GLLGAAAYAR 314 (316)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
|
7.1.2 from EC are found in invertebrates and microorganisms and are highly specific for glucose. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP [].; GO: 0004340 glucokinase activity, 0005524 ATP binding, 0006096 glycolysis, 0051156 glucose 6-phosphate metabolic process; PDB: 1SZ2_B 1Q18_B 2Q2R_B. |
| >PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis | Back alignment and domain information |
|---|
Probab=99.15 E-value=2e-10 Score=114.28 Aligned_cols=271 Identities=20% Similarity=0.208 Sum_probs=155.1
Q ss_pred EEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEe
Q 011283 93 YALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFS 172 (489)
Q Consensus 93 LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfS 172 (489)
|+||.|||+.|+.+++.+|+ ++.+. ..-|......+.++..+.|.+.+.+++.+.+... .+...+.++.+
T Consensus 1 lGIDgGgTkt~~vl~d~~g~---il~~~---~~~~~n~~~~~~~~~~~~i~~~i~~~~~~~~~~~----~~i~~~~~g~a 70 (271)
T PF01869_consen 1 LGIDGGGTKTKAVLVDENGN---ILGRG---KGGGANYNSVGFEEAMENIKEAIEEALSQAGLSP----DDIAAICIGAA 70 (271)
T ss_dssp EEEEECSSEEEEEEEETTSE---EEEEE---EES-TTHHHHHHHHHHHHHHHHHHHHHHHHTTST----TCCCEEEEEEE
T ss_pred CEEeeChheeeeEEEeCCCC---EEEEE---EeCCCCCCCCCcchhhhHHHHHHHHHHHHcCCCc----cccceeeeeEe
Confidence 79999999999999998774 55432 2233444333456778888888888888766431 22233434443
Q ss_pred eeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCcce
Q 011283 173 FPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNA 252 (489)
Q Consensus 173 fP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na 252 (489)
+--... +..+...+.+.. ++ .+.||+..++.+..- ..-|-+|-|||.++
T Consensus 71 G~~~~~----------------------~~~~~~~~~~~~---~v---~~~~Da~~al~~~~~---~~giv~I~GTGS~~ 119 (271)
T PF01869_consen 71 GYGRAG----------------------DEQEFQEEIVRS---EV---IVVNDAAIALYGATA---EDGIVVIAGTGSIA 119 (271)
T ss_dssp EEEETT----------------------TTTHHHHHHHHH---EE---EEEEHHHHHHHHHST---SSEEEEEESSSEEE
T ss_pred eecCcc----------------------cccchhhcceEE---EE---EEEHHHHHHhCCCCC---CcEEEEEcCCCceE
Confidence 332110 000111111211 44 799999877666433 47789999999998
Q ss_pred eEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhc
Q 011283 253 CYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEG 332 (489)
Q Consensus 253 ~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~ 332 (489)
..+.+ .|++.-...||++- +. --||.++ .|++|....++-
T Consensus 120 ~~~~~-------------~g~~~r~gG~G~~~----------------gD--------~GSg~~i---g~~~L~~~~~~~ 159 (271)
T PF01869_consen 120 YGRDR-------------DGRVIRFGGWGHCL----------------GD--------EGSGYWI---GRRALRAVLREL 159 (271)
T ss_dssp EEEET-------------TSEEEEEEESCTTT----------------TT--------TTSHHHH---HHHHHHHHHHHH
T ss_pred EEEEc-------------CCcEEEeCCCCCCc----------------CC--------CCcHHHH---HHHHHhHHHHHh
Confidence 88662 23455556778761 11 1255566 344444333321
Q ss_pred cccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHH
Q 011283 333 ALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQ 412 (489)
Q Consensus 333 ~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~ 412 (489)
.+..++....+ ......++.+ +..++.. ++..+..|..|++++++.++.-+.+++.
T Consensus 160 ---d~~~~~~~~~~-~~~~~~~A~f----------a~~v~~~----------a~~gd~~a~~Il~~a~~~la~~i~~~~~ 215 (271)
T PF01869_consen 160 ---DGRAEPTPYAK-PASNARIAVF----------APTVFEA----------AQQGDEVARDILAEAADELAELIKAVLK 215 (271)
T ss_dssp ---TTSSTTSHHHH-TT-HHHHHCT----------HHHHHHH----------HHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCccccCcccC-CCChhheehh----------hHHHHHH----------HHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111000 0000111111 1122221 2334589999999999999999999998
Q ss_pred hhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHh
Q 011283 413 KIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLA 479 (489)
Q Consensus 413 ~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~a 479 (489)
+.+... ..|++-|||+++.+ +.+.+++.|++.+... .-..+......+.+|||++|
T Consensus 216 ~~~~~~--------~~v~l~GGv~~~~~-~~~~l~~~l~~~~~~~--~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 216 RLGPEK--------EPVVLSGGVFKNSP-LVKALRDALKEKLPKV--PIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp TCTCCC--------CSEEEESGGGGCHH-HHHHHGGGS-HHHHCC--TCECECCGSSHHHHHHHHHH
T ss_pred hcCCCC--------CeEEEECCccCchH-HHHHHHHHHHHhcCCC--ceEECCCCCccHHHHHHHhC
Confidence 887632 12899999998866 4455666666554331 12345566788899999986
|
The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A. |
| >TIGR02707 butyr_kinase butyrate kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-09 Score=110.42 Aligned_cols=271 Identities=12% Similarity=0.077 Sum_probs=153.4
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHH---HhhhhHHHhhcCccccCCCceeeee
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIA---TGLAKFAEKEAGKFHLPQGRQREIG 168 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia---~~i~~~~~~~~~~~~~~~~~~~~lG 168 (489)
.|+|..|||++|+++++..+. +..+.. ...++ .+ +..+...+++. +.|.+++++++... .+...+
T Consensus 2 il~in~Gsts~k~alf~~~~~---~~~~~~-~~~~~-~~--~~~~~~~~q~~~r~~~i~~~l~~~~~~~----~~i~av- 69 (351)
T TIGR02707 2 ILVINPGSTSTKLAVFEDERP---LFEETL-RHSVE-EL--GRFKNVIDQFEFRKQVILQFLEEHGISI----SKLDAV- 69 (351)
T ss_pred EEEEecCchhheEEEEeCCCc---eeeeee-cCCHH-Hh--cccccHHHHHHHHHHHHHHHHHHcCCCc----ccccEE-
Confidence 689999999999999987653 443221 11112 22 34556778888 88888888765321 223334
Q ss_pred eEEeeeccccccccce-ee-----e-eccceeeecCCCchHHHHHHHHHH-hcCcceEeeeeecc---------cccccc
Q 011283 169 FTFSFPVKQTSIDSGV-LI-----K-WTKGFSVSGTAGKDVVACLNEAME-RQGLDMRVSALVND---------TVGTLA 231 (489)
Q Consensus 169 ~tfSfP~~q~~i~~g~-li-----~-wtKgf~~~~~~G~dv~~lL~~al~-~~~l~v~v~ai~ND---------tvatll 231 (489)
..-++|++.. .-|. ++ . -......... .++..++-..+. ..++|. ++.|| +..+.+
T Consensus 70 ~~RgG~~~~v--~Gg~~~v~~~~~~~l~~~~~~~~~--hn~~~~~~~~~~~~~~~p~---~vfDt~fh~~~~~~a~~~al 142 (351)
T TIGR02707 70 VGRGGLLKPI--PGGTYLVNEAMLEDLKSGKRGEHA--SNLGAIIANELADELNIPA---YIVDPVVVDEMEDVARISGL 142 (351)
T ss_pred EECCCCCcee--cceeEEECHHHHHHHHhcCCCCCC--CCHHHHHHHHHHHHcCCCE---EEcCChhhhcChHHHHHhcc
Confidence 3344454431 1111 00 0 0000000000 122222222222 237776 58888 777777
Q ss_pred cccc----------------------ccCc--eEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCC
Q 011283 232 GARY----------------------WDED--VMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGL 287 (489)
Q Consensus 232 a~~~----------------------~~~~--~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~l 287 (489)
.+.+ ++.+ +.|.+.||||+++|.+.+++.+.+..+.++|.+.|. +-+|+.
T Consensus 143 pe~~RrygfHgls~~~v~~~~~~~~g~~~~~~~~I~~hLGtGig~~ai~~Gk~vdgs~G~agEg~~~~--tr~G~i---- 216 (351)
T TIGR02707 143 PEIERKSIFHALNQKAVARRIAKELGKRYEEMNLIVAHMGGGISVAAHRKGRVIDVNNALDGEGPFSP--ERSGTL---- 216 (351)
T ss_pred chhhhhhchhhhhHHHHHHHHHHHcCCCcccCCEEEEEeCCCceeeeEECCEEEEcCCCCCCcCCccc--CccCCC----
Confidence 6441 1223 899999999999999999998888777666555553 223332
Q ss_pred cccccccccccccCCcchhhhh---hhhchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchh
Q 011283 288 PLTEFDRDMDAASINPGEQIYE---KTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSED 364 (489)
Q Consensus 288 p~t~~D~~~D~~s~~pg~~~~E---k~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~ 364 (489)
+....... ..+++ ..|.| .+.++..|..+ . + +.
T Consensus 217 d~~~~~~~--~~~~~--~s~~el~~~l~~~sGl~~~--------------~-g----------s~--------------- 252 (351)
T TIGR02707 217 PLGDLVDL--CYSGK--YTKEEMKKKIVGNGGLVAY--------------L-G----------TN--------------- 252 (351)
T ss_pred CchhHHHH--HhcCC--CCHHHHHHHHHhccCcccc--------------c-C----------CC---------------
Confidence 10000000 01222 23333 44444444100 0 0 00
Q ss_pred HhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhh--hccCCcccccceeEEEecCccccchhHH
Q 011283 365 LQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKI--DEDSNGAIFGKRTVVAMDGGLYEHYTQY 442 (489)
Q Consensus 365 ~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~--~~~~~~~~~~~~~~I~i~Gsv~~~~~~f 442 (489)
..+++++. ++..++.|+.+++..++.++.+|++++..+ +| ..|+++||+.+. +.|
T Consensus 253 --d~reI~~~----------a~~GD~~A~~a~d~~~~~la~~Ia~l~~~l~g~p----------D~IV~gGGI~e~-~~l 309 (351)
T TIGR02707 253 --DAREVEKR----------IEAGDEKAKLILDAMAYQIAKEIGKMAVVLKGKV----------DAIVLTGGLAYS-KYF 309 (351)
T ss_pred --CHHHHHHH----------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC----------CEEEEcchhhcC-HHH
Confidence 12233332 223458899999999999999999999999 44 369999999975 667
Q ss_pred HHHHHHHHHHhh
Q 011283 443 RRYVHEAVTELL 454 (489)
Q Consensus 443 ~~~i~~~l~~~~ 454 (489)
++.+.+.++.+.
T Consensus 310 ~~~I~~~l~~~a 321 (351)
T TIGR02707 310 VSEIIKRVSFIA 321 (351)
T ss_pred HHHHHHHHHhhC
Confidence 899988887753
|
This model represents an enzyme family in which members are designated either butryate kinase or branched-chain carboxylic acid kinase. The EC designation 2.7.2.7 describes an enzyme with relatively broad specificity; gene products whose context suggests a role in metabolism of aliphatic amino acids are likely to act as branched-chain carboxylic acid kinase. The gene typically found adjacent, ptb (phosphate butyryltransferase), likewise encodes an enzyme that may have a broad specificity that includes a role in aliphatic amino acid cabolism. |
| >PRK03011 butyrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.4e-09 Score=106.29 Aligned_cols=294 Identities=15% Similarity=0.176 Sum_probs=162.2
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhc-cChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMC-GTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~-~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
+.|+|.-|.|..|+++.+-.. .+..+.. .++. +++.. .+..+-+++=.+.|.+++++++... .+...+ .
T Consensus 3 ~il~inpgststk~a~~~~~~---~~~~~~~-~h~~-~~~~~~~~~~~q~~~r~~~i~~~l~~~g~~~----~~l~av-~ 72 (358)
T PRK03011 3 RILVINPGSTSTKIAVFEDEK---PIFEETL-RHSA-EELEKFKTIIDQYEFRKQAILDFLKEHGIDL----SELDAV-V 72 (358)
T ss_pred EEEEEcCCCchheEEEEcCCc---eeeeecc-ccCH-HHHhcCCCccchHHHHHHHHHHHHHHcCCCh----hcceEE-E
Confidence 579999999999999997432 2333221 2221 22221 1223445666678888888776432 222333 2
Q ss_pred EEeeecccccccccee-------eeeccceeeecCCCchHHHHHHHHHHh-cCcceEeeeeecc----------------
Q 011283 170 TFSFPVKQTSIDSGVL-------IKWTKGFSVSGTAGKDVVACLNEAMER-QGLDMRVSALVND---------------- 225 (489)
Q Consensus 170 tfSfP~~q~~i~~g~l-------i~wtKgf~~~~~~G~dv~~lL~~al~~-~~l~v~v~ai~ND---------------- 225 (489)
.=++.++. +..|+. -.-.+.. +...=.++..++...+.+ .++|+ +|.|+
T Consensus 73 ~RgG~~~~--v~gG~~~v~~~~~~~l~~~~--~~~~~~nl~~~~a~~~~~~~~~p~---~v~D~~~~~~~~~~a~~~~lp 145 (358)
T PRK03011 73 GRGGLLKP--IPGGTYRVNEAMLEDLKNGK--YGEHASNLGAIIAYEIAKELGIPA---FIVDPVVVDEMEPVARISGLP 145 (358)
T ss_pred EcCCCCcc--cCCCCEEcCHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHhcCCCE---EEECCcccccCCHHHHHcCCC
Confidence 22222221 112221 0000000 000112344444444433 47785 78888
Q ss_pred ----------cccccccccc---c----cCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCc
Q 011283 226 ----------TVGTLAGARY---W----DEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLP 288 (489)
Q Consensus 226 ----------tvatlla~~~---~----~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp 288 (489)
.+-.++++.| . ...+.|.+.+|||+++|.+.+++.+.+..+.++|...| .+-+|+. |
T Consensus 146 ~i~R~~gfHgln~~~va~~~a~~~g~~~~~~n~I~~hLGtGig~gai~~Gk~idgs~g~agEG~~~--~~R~G~l----~ 219 (358)
T PRK03011 146 EIERKSIFHALNQKAVARRVAKELGKKYEELNLIVAHLGGGISVGAHRKGRVIDVNNALDGEGPFS--PERAGGL----P 219 (358)
T ss_pred CcceeecchHHhHHHHHHHHHHHhCCCcccCcEEEEEeCCCceeeEEECCEEEecCCccCCCCCcc--cCcccCc----C
Confidence 5555555555 1 24489999999999999999999887766544321111 1112322 1
Q ss_pred ccccccccccccCCcchhhhhhhhchhhH-HHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhh
Q 011283 289 LTEFDRDMDAASINPGEQIYEKTISGMYL-GEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQA 367 (489)
Q Consensus 289 ~t~~D~~~D~~s~~pg~~~~Ek~~SG~yL-gei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~ 367 (489)
|+ ...+...+|.|= -++.+ .+...+.+..- . .+ . .
T Consensus 220 --------------~~-~~~~~~~~g~~s~~~l~~----~l~~~~Gl~~~-----~------gs-----------~---d 255 (358)
T PRK03011 220 --------------VG-DLVELCFSGKYTKEELKK----KLVGKGGLVAY-----L------GT-----------N---D 255 (358)
T ss_pred --------------cH-HHHHHHhcCCCCHHHHHH----HHHhccCcccc-----c------CC-----------C---C
Confidence 10 122223333331 11122 22222111110 0 00 0 1
Q ss_pred hhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhh--hccCCcccccceeEEEecCccccchhHHHHH
Q 011283 368 VGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKI--DEDSNGAIFGKRTVVAMDGGLYEHYTQYRRY 445 (489)
Q Consensus 368 ~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~--~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~ 445 (489)
.+++++. ++..++.|+.++++.++.+|.+|++++..+ +| ..|+++||+.+ .+.|++.
T Consensus 256 ~reV~~~----------a~~GD~~A~~ald~~~~~lak~I~~l~~~L~gdp----------D~IVlgGGI~~-~~~l~~~ 314 (358)
T PRK03011 256 AREVEKR----------IEEGDEKAKLVYEAMAYQIAKEIGAMAAVLKGKV----------DAIVLTGGLAY-SKRLVER 314 (358)
T ss_pred HHHHHHH----------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC----------CEEEEeCcccc-CHHHHHH
Confidence 2333332 223458899999999999999999999999 45 36999999998 7899999
Q ss_pred HHHHHHHhhCcccccceEEEecc---CCcchhHHHH
Q 011283 446 VHEAVTELLGTEISKNVVIEHTK---DGSGIGAALL 478 (489)
Q Consensus 446 i~~~l~~~~~~~~~~~v~i~~a~---Dgs~iGAA~~ 478 (489)
+++.++.+ ..+.+.+++ ++...||+-+
T Consensus 315 I~~~l~~~------~pv~i~p~~~e~~A~a~GA~rv 344 (358)
T PRK03011 315 IKERVSFI------APVIVYPGEDEMEALAEGALRV 344 (358)
T ss_pred HHHHHHhh------CCeEEEeCCCHHHHHHHHHHHH
Confidence 99988865 247788773 5677777644
|
|
| >smart00732 YqgFc Likely ribonuclease with RNase H fold | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.8e-09 Score=86.91 Aligned_cols=97 Identities=16% Similarity=0.213 Sum_probs=66.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
++||||+|||++++++++..|. +... ..+++. .+.+++++.+.+.+.++ . ...+|++
T Consensus 2 ~ilgiD~Ggt~i~~a~~d~~g~---~~~~----~~~~~~---~~~~~~~~~l~~~i~~~----~---------~~~i~Ig 58 (99)
T smart00732 2 RVLGLDPGRKGIGVAVVDETGK---LADP----LEVIPR---TNKEADAARLKKLIKKY----Q---------PDLIVIG 58 (99)
T ss_pred cEEEEccCCCeEEEEEECCCCC---EecC----EEEEEe---cCcchHHHHHHHHHHHh----C---------CCEEEEe
Confidence 4899999999999999987664 4432 233332 12446666666666542 1 3468888
Q ss_pred Eeeeccccccccceee-eeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccc
Q 011283 171 FSFPVKQTSIDSGVLI-KWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAG 232 (489)
Q Consensus 171 fSfP~~q~~i~~g~li-~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla 232 (489)
+|+|++ |.+. .| . .++.+.|++.+ ++|| .++||++++..+
T Consensus 59 ~pg~v~------g~~~~~~---------~-~~l~~~l~~~~---~~pv---~~~nDa~st~~a 99 (99)
T smart00732 59 LPLNMN------GTASRET---------E-EAFAELLKERF---NLPV---VLVDERLATVYA 99 (99)
T ss_pred CCcCCC------CCcCHHH---------H-HHHHHHHHHhh---CCcE---EEEeCCcccccC
Confidence 888874 2221 24 2 48888888866 7897 799999998753
|
YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions. |
| >COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.1e-06 Score=86.96 Aligned_cols=277 Identities=20% Similarity=0.167 Sum_probs=153.8
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeee
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIG 168 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG 168 (489)
+-+||+||-|||..|+.+-+..|+ ++-+- ..=|.++.+.+.++-+..|.+.|.+.+++.+..+ -.
T Consensus 4 ~~~~lGVDGGGTkt~a~l~~~~g~---vlg~g---~sGpAN~~~~~~e~A~~ni~~ai~~A~~~aG~~~---------~~ 68 (301)
T COG2971 4 MPYFLGVDGGGTKTRAVLADEDGN---VLGRG---KSGPANIQLVGKEEAVRNIKDAIREALDEAGLKP---------DE 68 (301)
T ss_pred ccEEEEEccCCcceEEEEEcCCCc---EEEEe---ccCCceecccchHHHHHHHHHHHHHHHHhcCCCH---------HH
Confidence 457999999999999999997664 66543 2336666665558889999999999998776432 12
Q ss_pred eEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceE-eeeeeccccccccccccccCceEEEEEec
Q 011283 169 FTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMR-VSALVNDTVGTLAGARYWDEDVMVAVILG 247 (489)
Q Consensus 169 ~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~-v~ai~NDtvatlla~~~~~~~~~iglIlG 247 (489)
|.++.+.-- + ...++ ..-.+.+ + +.+|.- -+.|+||+..++.+.-.. +.=+-+|+|
T Consensus 69 i~~~~agla-----~--ag~~~---------~~~~~~~-~----~~l~~a~~v~v~~Dg~iAl~ga~~~--~~Gii~i~G 125 (301)
T COG2971 69 IAAIVAGLA-----L--AGANV---------EEAREEL-E----RLLPFAGKVDVENDGLIALRGALGD--DDGIIVIAG 125 (301)
T ss_pred hCceeeeee-----c--cCcch---------hHHHHHH-H----HhcCccceEEEecChHHHHhhccCC--CCCEEEEec
Confidence 222222110 0 00000 0111222 1 134432 457999999999987443 333455666
Q ss_pred CCcceeEEeeccccccccCCcCCCCCeeeecccccc-cCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHH
Q 011283 248 TGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAF-SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLL 326 (489)
Q Consensus 248 TG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f-~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~ 326 (489)
|| ++++-... |+...-..||.+ .+ -.||.+||+ .++.
T Consensus 126 TG--Si~~~~~g------------g~~~r~GG~Gf~IgD-------------------------egSga~ig~---~~L~ 163 (301)
T COG2971 126 TG--SIGYGRKG------------GRRERVGGWGFPIGD-------------------------EGSGAWIGR---EALQ 163 (301)
T ss_pred CC--eEEEEEeC------------CeeEEecCcCccccc-------------------------cchHHHHHH---HHHH
Confidence 66 55554311 345555688877 21 157888854 4333
Q ss_pred HHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhh-hhccc------c-cccccceeeeeehhhhhhc
Q 011283 327 KMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLY-DVAGV------E-SSLKARKVVIEVCDTIVKR 398 (489)
Q Consensus 327 ~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~-~~~~~------~-~~~~d~~~~~~ia~~V~~R 398 (489)
+...+ |.+..+.. .+....+..+.. |.+.+..... ...+. . .-.+.++.++.+|..|+++
T Consensus 164 ~~lra---~DG~~~~t-----~L~d~v~~~f~~----d~edlv~~~y~a~~~~~~ia~lap~V~~~A~~GD~~A~~Il~~ 231 (301)
T COG2971 164 EALRA---FDGRREAT-----PLTDAVMAEFNL----DPEDLVAFIYKAGPGDKKIAALAPAVFEAARKGDPVAIRILKE 231 (301)
T ss_pred HHHHH---hcCCccCC-----hHHHHHHHHhCC----CHHHHHHHHHhcCCchHHHHHhhHHHHHHHHcCCHHHHHHHHH
Confidence 33322 22222211 122222222221 1111111111 10000 0 0113356777999999999
Q ss_pred CCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHH
Q 011283 399 GGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALL 478 (489)
Q Consensus 399 aA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~ 478 (489)
||.+++..+-++....+. ..+.+-||++..++.|....++.+-. + . .+--..||..+
T Consensus 232 aa~~i~~~~~~l~~~~g~----------~~l~l~GG~~~~~~~~~~~~~~~l~~---~-----~-----~~D~~~GA~~~ 288 (301)
T COG2971 232 AAAYIATLLEALSIFNGS----------EKLSLLGGLAPSYPYYLSLFRRALLV---P-----P-----IGDALSGAVLL 288 (301)
T ss_pred HHHHHHHHHHHHhcccCC----------ceEEEeccccccchhhHHHHHHHhcC---C-----c-----cccHHHHHHHH
Confidence 997666655555322222 35889999999999999998875421 1 1 34447788777
Q ss_pred hh
Q 011283 479 AS 480 (489)
Q Consensus 479 aa 480 (489)
|.
T Consensus 289 A~ 290 (301)
T COG2971 289 AL 290 (301)
T ss_pred HH
Confidence 64
|
|
| >COG0837 Glk Glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.2e-05 Score=77.41 Aligned_cols=289 Identities=17% Similarity=0.178 Sum_probs=157.3
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
..|+=|+||||.|+++|+.... +.... +.++. .+ |..+-+.|++++.++.. ..+...-|+
T Consensus 7 p~LvgDIGGTnaRfaLv~~a~~--~~~~~--~~~~~------~d----ypsle~av~~yl~~~~~------~~~~~a~~A 66 (320)
T COG0837 7 PRLVGDIGGTNARFALVEIAPA--EPLQA--ETYAC------AD----YPSLEEAVQDYLSEHTA------VAPRSACFA 66 (320)
T ss_pred ceEEEecCCcceEEEEeccCCC--Ccccc--ceecc------cC----cCCHHHHHHHHHHHhhc------cCccceEEE
Confidence 3566699999999999987542 11110 01221 11 23344555666555421 234557888
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccccccc-------------
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD------------- 237 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~------------- 237 (489)
..+|++-..+ .=+..+|. | +. +.+++.| +++- +.++||=.|..++-...+
T Consensus 67 iAgPv~gd~v-~lTN~~W~--~--------s~-~~~r~~L---gl~~--v~liNDF~A~A~Ai~~l~~~dl~qigg~~~~ 129 (320)
T COG0837 67 IAGPIDGDEV-RLTNHDWV--F--------SI-ARMRAEL---GLDH--LSLINDFAAQALAIPRLGAEDLEQIGGGKPE 129 (320)
T ss_pred EecCccCCEE-eeecCccc--c--------cH-HHHHHhc---CCCc--EEEechHHHHHhhccccCHHHHHHhcCCCCC
Confidence 8899863111 11222564 1 22 2334434 6642 479999999888754421
Q ss_pred -CceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccc-cCCcchhhhhhhhchh
Q 011283 238 -EDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAA-SINPGEQIYEKTISGM 315 (489)
Q Consensus 238 -~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~-s~~pg~~~~Ek~~SG~ 315 (489)
.....-+==|||.|.|...+... +.+.+-+|-||-. .-|+|+-|.++=+. ..+-|.-.-|...||+
T Consensus 130 ~~a~~avlGPGTGLGVa~Lv~~~~-----------~w~~lp~EGGHvd-f~P~~~~E~~i~~~l~~~~GrVS~Er~LSG~ 197 (320)
T COG0837 130 PNAPRAVLGPGTGLGVAGLVPNGG-----------GWIPLPGEGGHVD-FAPRSEREFQILEYLRARFGRVSAERVLSGP 197 (320)
T ss_pred CCCceEEEcCCCCcceEEEEecCC-----------eeEeccCCCcccc-CCCCCHHHHHHHHHHHHhcCccchhhhcccc
Confidence 12333334578888888886442 3467778877762 44777777665321 1223445679999999
Q ss_pred hHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhh
Q 011283 316 YLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTI 395 (489)
Q Consensus 316 yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V 395 (489)
.|..+.|-+... . +..|.. .+...+.+. .+. -.+..|+..
T Consensus 198 GL~~iY~al~~~-~-------~~~~~~------~~p~~It~~-------------al~-------------g~d~~a~~t 237 (320)
T COG0837 198 GLVNLYRALCAA-D-------GRLPED------LTPAAITER-------------ALA-------------GGDALARET 237 (320)
T ss_pred cHHHHHHHHHHh-h-------CCCccc------CCHHHHHHH-------------Hhc-------------CCCHHHHHH
Confidence 997766643321 1 011111 111111111 111 123667777
Q ss_pred hhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchh------HHHHHHHHHH--HHhhCcccccceEEEec
Q 011283 396 VKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYT------QYRRYVHEAV--TELLGTEISKNVVIEHT 467 (489)
Q Consensus 396 ~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~------~f~~~i~~~l--~~~~~~~~~~~v~i~~a 467 (489)
++....++|.--..+.-.+... --|=+.||+..+.- .|+++.+..= ..++. .-.|.++..
T Consensus 238 l~lF~~~lG~~AGdlAL~lgar---------GGVyiaGGI~pril~~l~~s~Fr~~FedKGr~sa~l~---~IPV~vi~~ 305 (320)
T COG0837 238 LSLFCAILGRVAGDLALTLGAR---------GGVYIAGGIVPRILEALKASGFRARFEDKGRMSAYLA---DIPVYVILH 305 (320)
T ss_pred HHHHHHHHHhhHHhHHHHhhcc---------CcEEEcCCchHhHHHHHhcchHHHHhhhcCchHHHHh---hCCEEEEec
Confidence 7777777776666666666651 12556777755432 2333332211 11111 124667777
Q ss_pred cCCcchhHHHHhh
Q 011283 468 KDGSGIGAALLAS 480 (489)
Q Consensus 468 ~Dgs~iGAA~~aa 480 (489)
...+++|||..+.
T Consensus 306 ~~~gL~Gaa~~~~ 318 (320)
T COG0837 306 PQPGLLGAAAALR 318 (320)
T ss_pred CCchHHHHHHHhc
Confidence 8999999998764
|
|
| >PRK13318 pantothenate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=97.72 E-value=2.3e-05 Score=77.58 Aligned_cols=132 Identities=19% Similarity=0.140 Sum_probs=71.0
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEE
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTF 171 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tf 171 (489)
+|+||+|||++|+++++ ++ +++.. +++|+... .+.+++++++ .++++..+... .+...+|+++
T Consensus 2 iL~IDIGnT~iK~al~d-~g---~i~~~----~~~~t~~~-~~~~~~~~~l----~~l~~~~~~~~----~~i~~I~iss 64 (258)
T PRK13318 2 LLAIDVGNTNTVFGLYE-GG---KLVAH----WRISTDSR-RTADEYGVWL----KQLLGLSGLDP----EDITGIIISS 64 (258)
T ss_pred EEEEEECCCcEEEEEEE-CC---EEEEE----EEEeCCCC-CCHHHHHHHH----HHHHHHcCCCc----ccCceEEEEE
Confidence 68999999999999998 44 34442 44554432 2345555444 44444433210 1234455554
Q ss_pred eeeccccccccceeeeeccceeeecCCCch-HHHHHHHHHHhcCcceEeeeeecc--------ccccccccccccCceEE
Q 011283 172 SFPVKQTSIDSGVLIKWTKGFSVSGTAGKD-VVACLNEAMERQGLDMRVSALVND--------TVGTLAGARYWDEDVMV 242 (489)
Q Consensus 172 SfP~~q~~i~~g~li~wtKgf~~~~~~G~d-v~~lL~~al~~~~l~v~v~ai~ND--------tvatlla~~~~~~~~~i 242 (489)
--|-. +..-.+.+..|-+ ..+ +....+..+ ++++ ++.|| +++.++.+.|.+ +.+
T Consensus 65 Vvp~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~~---gl~~---~y~np~~lG~DR~a~~~aa~~~~~~--~~i 127 (258)
T PRK13318 65 VVPSV-MHSLERMCRKYFN--------IEPLVVVGPGVKT---GINI---KVDNPKEVGADRIVNAVAAYELYGG--PLI 127 (258)
T ss_pred ecCch-HHHHHHHHHHHhC--------CCCeEEECCCcCC---CCce---ecCChhhcchHHHHHHHHHHHHcCC--CEE
Confidence 22421 1111111111111 111 111212212 6666 78898 666666666654 688
Q ss_pred EEEecCCcceeEEee
Q 011283 243 AVILGTGTNACYVEQ 257 (489)
Q Consensus 243 glIlGTG~Na~yie~ 257 (489)
.+.+||++...++..
T Consensus 128 vid~GTA~t~d~v~~ 142 (258)
T PRK13318 128 VVDFGTATTFDVVSA 142 (258)
T ss_pred EEEcCCceEEEEEcC
Confidence 999999999999854
|
|
| >PRK00976 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0002 Score=72.31 Aligned_cols=77 Identities=26% Similarity=0.248 Sum_probs=59.8
Q ss_pred eeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEe
Q 011283 387 VVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEH 466 (489)
Q Consensus 387 ~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~ 466 (489)
..+..|+.++++.++.+|.+|+++++.++| ..|+++||+.+..+. .+.+.+++.+.+. .-.+
T Consensus 235 ~GD~~A~~aid~~~~~LA~~IAnLi~llDP----------e~IVLGGGVS~~~e~---~L~~~I~e~l~~~-----~a~L 296 (326)
T PRK00976 235 KGDEKAKLAIDTLALFVAMEIASLLLLNPE----------DNVVLAGSVGEMDEP---DVSERIKELLDKK-----VLVL 296 (326)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhcCC----------CEEEEcCccccCchh---HHHHHHHHHhccc-----cccc
Confidence 345789999999999999999999999998 369999999987533 3555555554331 3345
Q ss_pred ccCCcchhHHHHhhc
Q 011283 467 TKDGSGIGAALLASA 481 (489)
Q Consensus 467 a~Dgs~iGAA~~aa~ 481 (489)
.++++.+|||.+|..
T Consensus 297 G~dAGaiGAA~iA~~ 311 (326)
T PRK00976 297 GKESAAIGLALIARD 311 (326)
T ss_pred CCchHHHHHHHHHHH
Confidence 689999999998864
|
|
| >PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0014 Score=63.98 Aligned_cols=61 Identities=13% Similarity=0.286 Sum_probs=44.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccc---hhhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQ---ELMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~---~~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
+||+||+|.|++|+++++..|+ ++...+..++... .....+++++++.+.+++++++++.+
T Consensus 1 y~lgiDiGTts~K~~l~d~~g~---iv~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~ 64 (245)
T PF00370_consen 1 YYLGIDIGTTSVKAVLFDEDGK---IVASASRPYPYYTPEPGWAEQDPDEIWEAICEALKELLSQAG 64 (245)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEEETEBCSSTTEEEE-HHHHHHHHHHHHHHHHHHCT
T ss_pred CEEEEEEcccceEEEEEeCCCC---EEEEEEEeeeeccccccccccChHHHHHHHHHHHHHHHhhcC
Confidence 5899999999999999997664 5554433333221 12234688999999999999998763
|
These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the N-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the C-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3G25_D 3GE1_D 2NLX_A 2ITM_A 2ZF5_Y 3L0Q_B 3GG4_B 3I8B_A 3H3O_C 3FLC_X .... |
| >TIGR01312 XylB D-xylulose kinase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00096 Score=71.75 Aligned_cols=78 Identities=19% Similarity=0.285 Sum_probs=54.2
Q ss_pred EEEecCCcceEEEEEEeCCccceeeecccccccc--c-chhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 93 YALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--P-QELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 93 LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
|+||+|.|++|++++++.|+ ++.+....++. | ......+.+++++.+.+++++++++.+.. ..++..||+
T Consensus 1 lgIDiGtt~ik~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~l~~~i~~~~~~~~~~----~~~I~gIgv 73 (481)
T TIGR01312 1 LGIDLGTSGVKALLVDEQGE---VIASGSAPHTVISPHPGWSEQDPEDWWDATEEAIKELLEQASEM----GQDIKGIGI 73 (481)
T ss_pred CceeecCcceEEEEECCCCC---EEEEEeecccccCCCCCCeeeCHHHHHHHHHHHHHHHHHhcCCC----cccEEEEEE
Confidence 58999999999999998875 55444322221 0 11112457889999999999999876532 145677888
Q ss_pred E--Eeeec--cc
Q 011283 170 T--FSFPV--KQ 177 (489)
Q Consensus 170 t--fSfP~--~q 177 (489)
+ .++++ +.
T Consensus 74 s~~~~g~v~~d~ 85 (481)
T TIGR01312 74 SGQMHGLVLLDA 85 (481)
T ss_pred ecCCceeEEECC
Confidence 8 77777 64
|
D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization. |
| >PRK13321 pantothenate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.00076 Score=66.67 Aligned_cols=136 Identities=20% Similarity=0.185 Sum_probs=67.7
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEE
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTF 171 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tf 171 (489)
+|+||+|||++|+++++ ++ +++. ++++|+... .+.++++..+.+.+.+. +... .+...++++.
T Consensus 2 iL~IDIGnT~ik~gl~~-~~---~i~~----~~~~~T~~~-~~~~~~~~~l~~l~~~~----~~~~----~~i~~i~vss 64 (256)
T PRK13321 2 LLLIDVGNTNIKLGVFD-GD---RLLR----SFRLPTDKS-RTSDELGILLLSLFRHA----GLDP----EDIRAVVISS 64 (256)
T ss_pred EEEEEECCCeEEEEEEE-CC---EEEE----EEEEecCCC-CCHHHHHHHHHHHHHHc----CCCh----hhCCeEEEEe
Confidence 68999999999999998 33 2443 245665543 23556666665554433 2110 1234555555
Q ss_pred eeeccccccccceeeeeccc-eeeec-CCCchHHHHHHHHHHhcCcceEeeeeecc--ccccccccccccCceEEEEEec
Q 011283 172 SFPVKQTSIDSGVLIKWTKG-FSVSG-TAGKDVVACLNEAMERQGLDMRVSALVND--TVGTLAGARYWDEDVMVAVILG 247 (489)
Q Consensus 172 SfP~~q~~i~~g~li~wtKg-f~~~~-~~G~dv~~lL~~al~~~~l~v~v~ai~ND--tvatlla~~~~~~~~~iglIlG 247 (489)
--| +. .+.+..+.+. |+++. +.+.+....++..+ ..|. .+-|| +++.+..+.|.+ ++.+-+-+|
T Consensus 65 Vvp--~~---~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~y---~~P~---~lG~DR~a~~~aa~~~~~~-~~~lvid~G 132 (256)
T PRK13321 65 VVP--PL---NYSLESACKRYFGIKPLFVGPGIKTGLKIRY---DNPR---EVGADRIVNAVAARRLYPD-RNLIVVDFG 132 (256)
T ss_pred ecc--cH---HHHHHHHHHHHhCCCeEEECCCCCCCccccc---CChh---hccHHHHHHHHHHHHHcCC-CCEEEEECC
Confidence 333 21 1222211111 11111 12222222232222 3344 58899 454444455543 256777777
Q ss_pred CCcceeEEe
Q 011283 248 TGTNACYVE 256 (489)
Q Consensus 248 TG~Na~yie 256 (489)
|=+.-=++.
T Consensus 133 TA~T~d~v~ 141 (256)
T PRK13321 133 TATTFDCVS 141 (256)
T ss_pred CceEEEEEc
Confidence 766665554
|
|
| >TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.01 Score=64.99 Aligned_cols=73 Identities=16% Similarity=0.273 Sum_probs=49.5
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccc--cc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeee
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIG 168 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG 168 (489)
||+||+|+|++|+++++.+|+ ++...++.+++ |. .....+++++++.+.+++++.+++.+.. ..++..||
T Consensus 2 ~lgID~GTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~----~~~I~~Ig 74 (541)
T TIGR01315 2 YIGVDVGTGSARACIIDSTGD---ILALAAQNIKTWTPSSGLEGQSSVYIWQAICNCVKQVLAESKVD----PNSVKGIG 74 (541)
T ss_pred EEEEEecCcCEEEEEEcCCCC---EEEEEEeeeeeccCCCCcccCCHHHHHHHHHHHHHHHHHHcCCC----hhheEEEE
Confidence 799999999999999998775 55543323332 21 1223468889999999999998865432 13355556
Q ss_pred eEE
Q 011283 169 FTF 171 (489)
Q Consensus 169 ~tf 171 (489)
++.
T Consensus 75 is~ 77 (541)
T TIGR01315 75 FDA 77 (541)
T ss_pred ecc
Confidence 554
|
This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins. |
| >TIGR01314 gntK_FGGY gluconate kinase, FGGY type | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.01 Score=64.47 Aligned_cols=61 Identities=15% Similarity=0.268 Sum_probs=43.3
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeeccccccc--ccch-hhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVS--IPQE-LMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~--ip~~-~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
++||||+|+|++|+++++.+|+ ++.+...+++ .|.. ....+.+++++.+.+++++++++.+
T Consensus 1 ~~lgiDiGtt~~K~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 64 (505)
T TIGR01314 1 YMIGVDIGTTSTKAVLFEENGK---IVAKSSIGYPLYTPASGMAEENPEEIFEAVLVTIREVSINLE 64 (505)
T ss_pred CEEEEeccccceEEEEEcCCCC---EEEEEEeecccccCCCCCeeeCHHHHHHHHHHHHHHHHHhCC
Confidence 4799999999999999998774 5554433333 2111 1234678899999999999987543
|
Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. |
| >TIGR01311 glycerol_kin glycerol kinase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0098 Score=64.37 Aligned_cols=61 Identities=18% Similarity=0.289 Sum_probs=43.3
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--cch-hhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQE-LMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
++|+||+|+|++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.+++++.+++.+
T Consensus 2 ~~lgiDiGtt~iKa~l~d~~g~---~l~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 65 (493)
T TIGR01311 2 YILAIDQGTTSSRAIVFDKDGN---IVAIHQKEFTQIFPKPGWVEHDPMEIWESVLSCIAEALAKAG 65 (493)
T ss_pred eEEEEecCCCceEEEEECCCCC---EEEEEeeeccccCCCCCcEeeCHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999998774 55443222221 211 1123578899999999999988765
|
This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases. |
| >PRK10939 autoinducer-2 (AI-2) kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.016 Score=63.21 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=44.2
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeeccccccccc-----chhhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIP-----QELMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip-----~~~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
++|+||+|.|++|+++++.+|+ ++...+..++.+ ......+.+++++.+.+++++.+++.+
T Consensus 4 ~~lgID~GTts~Ka~l~d~~G~---~l~~~~~~~~~~~~~~~~g~~Eqd~~~~w~~~~~~l~~~~~~~~ 69 (520)
T PRK10939 4 YLMALDAGTGSIRAVIFDLNGN---QIAVGQAEWRHLAVPDVPGSMEFDLEKNWQLACQCIRQALQKAG 69 (520)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEeccccccCCCCCCCCeeECHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999998875 444433333321 112234688999999999999987654
|
|
| >PRK00047 glpK glycerol kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.013 Score=63.50 Aligned_cols=61 Identities=20% Similarity=0.275 Sum_probs=44.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeeccccccc--ccch-hhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVS--IPQE-LMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~--ip~~-~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
++|+||+|+|++|+++++.+|+ ++...+..++ .|.. ....+.+++++.+.+++++++++.+
T Consensus 6 ~~lgiD~GTts~Ka~l~d~~g~---~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~ 69 (498)
T PRK00047 6 YILALDQGTTSSRAIIFDHDGN---IVSVAQKEFTQIFPQPGWVEHDPNEIWASQLSVIAEALAKAG 69 (498)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEeeeccccCCCCCeEeeCHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999998775 4444322333 2221 1123688999999999999987654
|
|
| >TIGR01234 L-ribulokinase L-ribulokinase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.016 Score=63.39 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=45.6
Q ss_pred cEEEEecCCcceEEEEEE-eCCccceeeecccccccc-------c-------chhhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQ-LGGQEERVQATEFEQVSI-------P-------QELMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~-l~g~~~~i~~~~~~~~~i-------p-------~~~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
++|+||+|.|++|+++++ .+|+ ++...++.+++ | ......+++++++.+.+++++.+++.+
T Consensus 2 ~~lgiD~GTss~Ka~l~d~~~G~---~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Eqdp~~~w~~~~~~~~~~~~~~~ 77 (536)
T TIGR01234 2 YAIGVDFGTLSGRALAVDVATGE---EIATAVEWYRHWVKGQFLPKTGAKLPNDQALQHPADYIEVLEAAIPTVLAELG 77 (536)
T ss_pred eEEEEecCCCceEEEEEECCCCc---EeeeeeeccccccccccCCCccccCCCCccccCHHHHHHHHHHHHHHHHHHcC
Confidence 589999999999999999 7775 55444334442 3 223345688999999999999998754
|
This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli. |
| >PRK15027 xylulokinase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.02 Score=61.81 Aligned_cols=71 Identities=15% Similarity=0.372 Sum_probs=49.7
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--c-chhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--P-QELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
+||+||+|.|++|++++|..|+ ++...++.+++ | ......+++++++.+.+++++++++... +++..|
T Consensus 1 ~~lgID~GTts~Ka~l~d~~G~---vva~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~l~~~~~~------~~I~aI 71 (484)
T PRK15027 1 MYIGIDLGTSGVKVILLNEQGE---VVASQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL------QDVKAL 71 (484)
T ss_pred CEEEEEecccceEEEEEcCCCC---EEEEEeecccccCCCCCccccCHHHHHHHHHHHHHHHHHhCCc------cceeEE
Confidence 4899999999999999998774 66554434443 2 1122346788999999999999875421 345666
Q ss_pred eeE
Q 011283 168 GFT 170 (489)
Q Consensus 168 G~t 170 (489)
|++
T Consensus 72 ~is 74 (484)
T PRK15027 72 GIA 74 (484)
T ss_pred EEe
Confidence 664
|
|
| >PRK10331 L-fuculokinase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.035 Score=59.68 Aligned_cols=60 Identities=17% Similarity=0.206 Sum_probs=42.9
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc----cc-hhhccChHHHHHHHHHhhhhHHHhh
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI----PQ-ELMCGTSEELFDFIATGLAKFAEKE 153 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i----p~-~~~~~~~~~lfd~Ia~~i~~~~~~~ 153 (489)
++|+||+|.|++|+++++.+|+ ++...+..++. |. .....+++++++.+.+++++++++.
T Consensus 3 ~~lgID~GTt~~Ka~l~d~~G~---~~~~~~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~~~~~~ 67 (470)
T PRK10331 3 VILVLDCGATNVRAIAVDRQGK---IVARASTPNASDIAAENSDWHQWSLDAILQRFADCCRQINSEL 67 (470)
T ss_pred eEEEEecCCCceEEEEEcCCCc---EEEEEecccccccCCCCCCCcccCHHHHHHHHHHHHHHHHHhC
Confidence 6899999999999999998874 55444333221 11 1223467889999999999998753
|
|
| >COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.053 Score=58.91 Aligned_cols=63 Identities=19% Similarity=0.261 Sum_probs=45.4
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccch---hhccChHHHHHHHHHhhhhHHHhhc
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQE---LMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~---~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
.+||+||+|.|++|+.+++.++. .++......+++... ....+.++++..+.++|++++++..
T Consensus 4 ~~~lgIDiGTt~~Kavl~d~~~~--~~~~~~~~~~~~~~~~~g~~e~d~~~~w~~~~~ai~~l~~~~~ 69 (502)
T COG1070 4 KYVLGIDIGTTSVKAVLFDEDGG--EVVATARFENPVSTPQPGWAEQDPDELWQAILEALRQLLEESK 69 (502)
T ss_pred cEEEEEEcCCCcEEEEEEeCCCC--eEEEEeeccccccCCCCCCcccCHHHHHHHHHHHHHHHHHhcc
Confidence 47999999999999999999842 355443222322211 2234689999999999999998764
|
|
| >PTZ00294 glycerol kinase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.064 Score=58.24 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=43.7
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--c-chhhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--P-QELMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
.+|+||+|.|++|+++++.+|+ ++...+..+++ | ......+++++++.+.+++.+.+++.+
T Consensus 3 ~~lgiDiGTts~Ka~l~d~~G~---~v~~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~ 66 (504)
T PTZ00294 3 YIGSIDQGTTSTRFIIFDEKGN---VVSSHQIPHEQITPHPGWLEHDPEEILRNVYKCMNEAIKKLR 66 (504)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEEEeecccCCCCCeEeeCHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999998774 54443323331 1 112234678899999999999987654
|
|
| >TIGR02628 fuculo_kin_coli L-fuculokinase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.059 Score=57.91 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=42.4
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc----c-chhhccChHHHHHHHHHhhhhHHHh
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI----P-QELMCGTSEELFDFIATGLAKFAEK 152 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i----p-~~~~~~~~~~lfd~Ia~~i~~~~~~ 152 (489)
.+|+||+|.|++|+++++.+|+ ++.+.+.+++. | ......+.+++++.+.+++++++.+
T Consensus 2 ~ilgiD~GTss~K~~l~d~~g~---~va~~~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~l~~~ 65 (465)
T TIGR02628 2 VILVLDCGATNLRAIAINRQGK---IVASASTPNATKQAIENNDYHIWDLEAIWQKLADCCQQINSE 65 (465)
T ss_pred eEEEEecCCCcEEEEEEcCCCC---EEEEEecccccCCCCCCCCceeeCHHHHHHHHHHHHHHHHhh
Confidence 4799999999999999998774 55444333321 1 1122346788999999999999864
|
Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon. |
| >PRK04123 ribulokinase; Provisional | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.062 Score=59.00 Aligned_cols=61 Identities=15% Similarity=0.186 Sum_probs=42.8
Q ss_pred cEEEEecCCcceEEEEEEe-CCccceeeecccccccc--------cch-hhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQL-GGQEERVQATEFEQVSI--------PQE-LMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l-~g~~~~i~~~~~~~~~i--------p~~-~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
+|||||+|.|++|+++++. +|+ ++...+..++. |.. ....+++++++.+.+++++.+++.+
T Consensus 4 ~~lgiD~GTts~Ka~l~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~g~~Eqdp~~~w~~~~~~i~~~~~~~~ 74 (548)
T PRK04123 4 YVIGLDFGTDSVRALLVDCATGE---ELATAVVEYPHWVKGRYLDLPPNQALQHPLDYIESLEAAIPAVLKEAG 74 (548)
T ss_pred EEEEEecCCCceEEEEEECCCCc---EeEEEEeeccccccccccCCCCCceeeCHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999995 774 44443333331 111 1223577899999999999887654
|
|
| >PLN02295 glycerol kinase | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.083 Score=57.52 Aligned_cols=61 Identities=25% Similarity=0.248 Sum_probs=44.4
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--cc-hhhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQ-ELMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
++|+||+|.|++|++++|.+|+ ++...+..+++ |. .....+++++++.+.+++++.+++.+
T Consensus 1 ~vlgID~GTts~Ka~l~d~~G~---~~~~~~~~~~~~~~~~G~~Eqdp~~~w~~~~~~i~~~~~~~~ 64 (512)
T PLN02295 1 FVGAIDQGTTSTRFIIYDRDAR---PVASHQVEFTQIYPQAGWVEHDPMEILESVLTCIAKALEKAA 64 (512)
T ss_pred CEEEEecCCCceEEEEECCCCC---EEEEEeecccccCCCCCcEeeCHHHHHHHHHHHHHHHHHHcC
Confidence 4799999999999999998775 55443333332 21 12234688999999999999998764
|
|
| >COG0554 GlpK Glycerol kinase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.19 Score=53.14 Aligned_cols=104 Identities=21% Similarity=0.252 Sum_probs=71.3
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeeccc----ccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCce
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATEF----EQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQ 164 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~----~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~ 164 (489)
..++++||-|-|+.|+.+++.+|+ ++.... +-||-|.-+ .-++.+++..+..++.+.+.+.++.. .++
T Consensus 4 ~~yIlAiDqGTTssRaivfd~~g~---iva~~q~e~~Q~yP~~GWV-EhDp~eIw~~~~~~l~~a~~~~~i~~----~~i 75 (499)
T COG0554 4 DKYILAIDQGTTSSRAIVFDEDGN---IVAIAQREFTQIYPQPGWV-EHDPLEIWASVRSVLKEALAKAGIKP----GEI 75 (499)
T ss_pred ccEEEEEecCCcceeEEEECCCCC---chhhhhhhhhhhCCCCCcc-ccCHHHHHHHHHHHHHHHHHHcCCCc----cce
Confidence 467899999999999999998875 333221 135655443 35789999999999999988876542 567
Q ss_pred eeeeeEEeeeccccccccceeeeecc--ce---ee---ecCCCchHHHHHHHH
Q 011283 165 REIGFTFSFPVKQTSIDSGVLIKWTK--GF---SV---SGTAGKDVVACLNEA 209 (489)
Q Consensus 165 ~~lG~tfSfP~~q~~i~~g~li~wtK--gf---~~---~~~~G~dv~~lL~~a 209 (489)
..|||| +| +.+.+-|.| |= |+ .+-...++++.|.+.
T Consensus 76 aaIGIT-----NQ----RETtvvWdk~tG~Pi~naIvWQdrRTa~~c~~L~~~ 119 (499)
T COG0554 76 AAIGIT-----NQ----RETTVVWDKETGKPIYNAIVWQDRRTADICEELKAD 119 (499)
T ss_pred EEEEee-----cc----ceeEEEEeCCCCCCcccceeeeccchHHHHHHHHhc
Confidence 888887 66 556666877 21 11 122445666666654
|
|
| >KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.37 Score=51.89 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=59.8
Q ss_pred cccEEEEecCCcceEEEEEE-eCCccceeeecccc----cccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCc
Q 011283 89 RGLFYALDLGGTNFRVLRVQ-LGGQEERVQATEFE----QVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGR 163 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~-l~g~~~~i~~~~~~----~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~ 163 (489)
...+++||+|-|..|+++++ -.++ .+....+ .++.+. ....++.+++..+.+||+...+.... ..
T Consensus 5 ~~~~~gIDvGTtSaR~~v~~~~~~e---~l~~~~~~i~~~~~~~~-~~eq~p~eI~~~V~~ci~~~~e~l~~------~~ 74 (516)
T KOG2517|consen 5 EPVVLGIDVGTTSARALVFNAKNGE---LLSLAQKEITQEFPKEG-WVEQDPKEIWQAVCRCIEKACEKLGV------LN 74 (516)
T ss_pred cceEEEEEcCCCceEEEEEecCCCc---cceeeeeeeeeecCCCC-eEEeCHHHHHHHHHHHHHHHHHhhcc------cc
Confidence 45689999999999999999 3443 2221111 122222 23457899999999999998876543 23
Q ss_pred eeeeeeEEeeeccccccccceeeeeccceee
Q 011283 164 QREIGFTFSFPVKQTSIDSGVLIKWTKGFSV 194 (489)
Q Consensus 164 ~~~lG~tfSfP~~q~~i~~g~li~wtKgf~~ 194 (489)
....|++.++-+.| .++++ -|.|...-
T Consensus 75 ~~~~~~~~igv~~q---r~~~v-~w~~~tg~ 101 (516)
T KOG2517|consen 75 IKVVGATCIGVVNQ---REGSV-LWNKRTGE 101 (516)
T ss_pred ccccccEEEEEEec---CCceE-EeecCCCC
Confidence 45566888888887 33333 36665433
|
|
| >TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.37 Score=47.21 Aligned_cols=49 Identities=12% Similarity=0.255 Sum_probs=32.3
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
++|+||+|.|++|+++++ ++ +++... ..+ .+..++.+.+.+.+.+++.+
T Consensus 1 ~~lGIDiGtts~K~vl~d-~g---~il~~~----~~~-------~~~~~~~~~~~l~~~~~~~~ 49 (248)
T TIGR00241 1 ISLGIDSGSTTTKMVLME-DG---KVIGYK----WLD-------TTPVIEETARAILEALKEAG 49 (248)
T ss_pred CEEEEEcChhheEEEEEc-CC---EEEEEE----Eec-------CCCCHHHHHHHHHHHHHHcC
Confidence 378999999999999998 55 355432 112 12345556677777775543
|
This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase. |
| >PLN02669 xylulokinase | Back alignment and domain information |
|---|
Probab=89.86 E-value=0.74 Score=50.70 Aligned_cols=59 Identities=15% Similarity=0.200 Sum_probs=37.9
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccc--cchh----hccChH----------HHHHHHHHhhhhHHH
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQEL----MCGTSE----------ELFDFIATGLAKFAE 151 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~~~----~~~~~~----------~lfd~Ia~~i~~~~~ 151 (489)
.+|||||+|.|++|+++++.+|+ ++...+..+++ |..- ...+.+ .+++-+..+++++.+
T Consensus 8 ~~~LGiD~GT~s~Ka~l~d~~g~---vv~~a~~~~~~~~~~~~~~~gve~dp~~~~~~~~~~~~w~~al~~~l~~l~~ 82 (556)
T PLN02669 8 SLFLGFDSSTQSLKATVLDSNLR---IVASEIVHFDSDLPHYGTKDGVYRDPKVNGRIVSPTLMWVEALDLLLQKLAK 82 (556)
T ss_pred CeEEEEecccCCeEEEEEcCCCC---EEEEEEecCCcccCcCCCCCceEeCCcccCccCCCHHHHHHHHHHHHHHHHH
Confidence 46999999999999999998775 55444333331 1100 011233 455888888888763
|
|
| >COG1069 AraB Ribulose kinase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=89.15 E-value=0.96 Score=48.68 Aligned_cols=75 Identities=15% Similarity=0.251 Sum_probs=56.1
Q ss_pred hhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchh
Q 011283 395 IVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIG 474 (489)
Q Consensus 395 V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iG 474 (489)
+..+....+|.|.-.|+..+....- +-.+|-+-||. .++|.+.+.+-... .+.+.+..+++...+|
T Consensus 406 lY~a~l~a~A~GtR~Iie~~~~~g~-----~Id~l~~sGG~-~KN~llmql~aDvt--------g~~v~i~~s~~a~llG 471 (544)
T COG1069 406 LYRALLEATAFGTRAIIETFEDQGI-----AIDTLFASGGI-RKNPLLMQLYADVT--------GRPVVIPASDQAVLLG 471 (544)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHcCC-----eeeEEEecCCc-ccCHHHHHHHHHhc--------CCeEEeecccchhhhH
Confidence 4455556778888999998876322 22357777887 89998887775532 4578888899999999
Q ss_pred HHHHhhccc
Q 011283 475 AALLASANS 483 (489)
Q Consensus 475 AA~~aa~~~ 483 (489)
+|+.+|++.
T Consensus 472 sAm~~avAa 480 (544)
T COG1069 472 AAMFAAVAA 480 (544)
T ss_pred HHHHHHHHh
Confidence 999999876
|
|
| >TIGR02627 rhamnulo_kin rhamnulokinase | Back alignment and domain information |
|---|
Probab=87.98 E-value=0.8 Score=49.01 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=36.7
Q ss_pred EEEecCCcceEEEEEEeCCccceee-eccccccc--ccch-hhccChHHHHHHHHHhhhhHHH
Q 011283 93 YALDLGGTNFRVLRVQLGGQEERVQ-ATEFEQVS--IPQE-LMCGTSEELFDFIATGLAKFAE 151 (489)
Q Consensus 93 LaIDlGGTnlRv~lV~l~g~~~~i~-~~~~~~~~--ip~~-~~~~~~~~lfd~Ia~~i~~~~~ 151 (489)
||||+|.|+.|+++++.++..+++. ....+..+ +|.+ ...-+.+.+++.+.+++++...
T Consensus 1 ~aiD~Gtt~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~ 63 (454)
T TIGR02627 1 VAVDLGASSGRVMLASYENECQKLTLEEIHRFKNGLVSQNGHECWDIDALEQEIRLGLNKVDA 63 (454)
T ss_pred CcEeccCCchheEEEEEcCCCceEEEEEEEeCCCCCEeECCEEEEehHHHHHHHHHHHHHHhc
Confidence 5899999999999999974322343 22111111 1111 1123466788999999888865
|
This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism. |
| >TIGR01175 pilM type IV pilus assembly protein PilM | Back alignment and domain information |
|---|
Probab=85.54 E-value=4.3 Score=41.58 Aligned_cols=102 Identities=12% Similarity=0.204 Sum_probs=55.9
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
.++|||+|.+++|++.++..++..++.... ..++|......+.-.=.+.+++.|.+.+++.+.. ...+.++
T Consensus 4 ~~vgiDIg~~~Ik~v~~~~~~~~~~v~~~~--~~~~p~~~i~~g~i~d~~~~~~~l~~~~~~~~~~-------~k~v~~a 74 (348)
T TIGR01175 4 LLVGIDIGSTSVKVAQLKRSGDRYKLEHYA--VEPLPAGIFTEGHIVEYQAVAEALKELLSELGIN-------TKKAATA 74 (348)
T ss_pred cEEEEEeccCeEEEEEEEecCCceEEEEEE--EEECCCCcccCCCccCHHHHHHHHHHHHHHcCCC-------cceEEEE
Confidence 589999999999999998655433444322 3456654332211111355677777777765421 2234444
Q ss_pred Eeeeccccccccceeeeeccceeeec-CCCchHHHHHHHHHHh
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSG-TAGKDVVACLNEAMER 212 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~-~~G~dv~~lL~~al~~ 212 (489)
+|.+ . .+. |-+++|. +..+++.+.+.-..++
T Consensus 75 lp~~--~------~~~---r~~~~p~~i~~~el~~~i~~e~~~ 106 (348)
T TIGR01175 75 VPGS--A------VIT---KVIPVPAGLDERELEFAVYIEASH 106 (348)
T ss_pred ecCC--e------eEE---EEEeCCCCCCHHHHHHHHHHHHHh
Confidence 4333 2 111 2244554 4556777777655543
|
This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria. |
| >PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
Probab=83.54 E-value=0.82 Score=42.65 Aligned_cols=46 Identities=24% Similarity=0.387 Sum_probs=34.4
Q ss_pred EEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhcc
Q 011283 428 VVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASAN 482 (489)
Q Consensus 428 ~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~ 482 (489)
.|.+.||.. +.+.+.+.+...+. ..|.+...++++.+|||++|+++
T Consensus 152 ~i~~~GG~~-~n~~~~q~~Advl~--------~~V~~~~~~e~~a~GaA~~A~~a 197 (198)
T PF02782_consen 152 RIRVSGGGA-KNPLWMQILADVLG--------RPVVRPEVEEASALGAALLAAVA 197 (198)
T ss_dssp EEEEESGGG-GSHHHHHHHHHHHT--------SEEEEESSSTHHHHHHHHHHHHH
T ss_pred eeEeccccc-cChHHHHHHHHHhC--------CceEeCCCCchHHHHHHHHHHhh
Confidence 477778877 78888887766442 24656556899999999999875
|
These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A .... |
| >PTZ00009 heat shock 70 kDa protein; Provisional | Back alignment and domain information |
|---|
Probab=82.57 E-value=10 Score=42.61 Aligned_cols=57 Identities=16% Similarity=0.147 Sum_probs=36.8
Q ss_pred ecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEecCCccee
Q 011283 195 SGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVILGTGTNAC 253 (489)
Q Consensus 195 ~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIlGTG~Na~ 253 (489)
|..-+..=.+.+.+|.+..|+++ +.++|+.+|++++-.+. ....++-+=+|-|+=-.
T Consensus 148 Pa~f~~~qR~a~~~Aa~~AGl~v--~~li~EptAAAl~y~~~~~~~~~~~vlv~D~GggT~dv 208 (653)
T PTZ00009 148 PAYFNDSQRQATKDAGTIAGLNV--LRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDV 208 (653)
T ss_pred CCCCCHHHHHHHHHHHHHcCCce--eEEecchHHHHHHHhhhccCCCCCEEEEEECCCCeEEE
Confidence 33334455677777777678875 68999999999985442 13445555566665433
|
|
| >COG5146 PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=82.15 E-value=2.8 Score=40.68 Aligned_cols=74 Identities=22% Similarity=0.279 Sum_probs=44.9
Q ss_pred eeeecccccccccccc----ccCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccc
Q 011283 220 SALVNDTVGTLAGARY----WDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRD 295 (489)
Q Consensus 220 ~ai~NDtvatlla~~~----~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~ 295 (489)
|.+.||+.+-.+.--. -+--..+-+=+|+|+.--++...+......|.. -.| -|-||...-.-+.|.||..
T Consensus 122 vFv~~d~~~e~~~~~~~~~~h~lypyilvNiGsGvSilkvtgpsqf~RvGGss-lGG----GtlwGLlsLlt~a~~ydqm 196 (342)
T COG5146 122 VFVEFDAASEGLGILLKEQGHDLYPYILVNIGSGVSILKVTGPSQFERVGGSS-LGG----GTLWGLLSLLTQATDYDQM 196 (342)
T ss_pred HeeeeccccchhhhhhhhccccccceeeEeccCCeEEEEecCcchhccccccc-cCc----chHHHHHHHHcccccHHHH
Confidence 4789999887765433 233567888899998887776544332222211 111 2457755211267889998
Q ss_pred ccc
Q 011283 296 MDA 298 (489)
Q Consensus 296 ~D~ 298 (489)
+|.
T Consensus 197 ld~ 199 (342)
T COG5146 197 LDM 199 (342)
T ss_pred HHH
Confidence 884
|
|
| >TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 | Back alignment and domain information |
|---|
Probab=80.88 E-value=3.7 Score=43.07 Aligned_cols=23 Identities=22% Similarity=0.430 Sum_probs=20.3
Q ss_pred CCccccEEEEecCCcceEEEEEE
Q 011283 86 GNERGLFYALDLGGTNFRVLRVQ 108 (489)
Q Consensus 86 G~E~G~~LaIDlGGTnlRv~lV~ 108 (489)
+..+|.|+|||+|+|+.|+++++
T Consensus 140 ~~~~g~~lGIDiGSTttK~Vl~d 162 (404)
T TIGR03286 140 ERQEGLTLGIDSGSTTTKAVVME 162 (404)
T ss_pred hccCCEEEEEEcChhheeeEEEc
Confidence 45567899999999999999987
|
Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 489 | ||||
| 2nzt_A | 902 | Crystal Structure Of Human Hexokinase Ii Length = 9 | 8e-74 | ||
| 1dgk_N | 917 | Mutant Monomer Of Recombinant Human Hexokinase Type | 1e-73 | ||
| 1cza_N | 917 | Mutant Monomer Of Recombinant Human Hexokinase Type | 1e-73 | ||
| 1hkc_A | 917 | Recombinant Human Hexokinase Type I Complexed With | 1e-73 | ||
| 1hkb_A | 917 | Crystal Structure Of Recombinant Human Brain Hexoki | 1e-73 | ||
| 1bg3_A | 918 | Rat Brain Hexokinase Type I Complex With Glucose An | 3e-73 | ||
| 3hm8_A | 445 | Crystal Structure Of The C-Terminal Hexokinase Doma | 1e-72 | ||
| 1bdg_A | 451 | Hexokinase From Schistosoma Mansoni Complexed With | 4e-69 | ||
| 3fr0_A | 455 | Human Glucokinase In Complex With 2-Amino Benzamide | 7e-68 | ||
| 1v4t_A | 451 | Crystal Structure Of Human Glucokinase Length = 451 | 8e-68 | ||
| 4dch_A | 473 | Insights Into Glucokinase Activation Mechanism: Obs | 8e-68 | ||
| 1v4s_A | 455 | Crystal Structure Of Human Glucokinase Length = 455 | 8e-68 | ||
| 3imx_A | 455 | Crystal Structure Of Human Glucokinase In Complex W | 9e-68 | ||
| 3s41_A | 469 | Glucokinase In Complex With Activator And Glucose L | 1e-67 | ||
| 3f9m_A | 470 | Human Pancreatic Glucokinase In Complex With Glucos | 1e-67 | ||
| 3qic_A | 470 | The Structure Of Human Glucokinase E339k Mutation L | 1e-67 | ||
| 1ig8_A | 486 | Crystal Structure Of Yeast Hexokinase Pii With The | 2e-64 | ||
| 3o08_A | 485 | Crystal Structure Of Dimeric Klhxk1 In Crystal Form | 4e-63 | ||
| 3b8a_X | 485 | Crystal Structure Of Yeast Hexokinase Pi In Complex | 5e-54 |
| >pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii Length = 902 | Back alignment and structure |
|
| >pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With Glucose And Adp In The Active Site Length = 917 | Back alignment and structure |
|
| >pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I Complexed With Glucose, Glucose-6-Phosphate, And Adp Length = 917 | Back alignment and structure |
|
| >pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose And Phosphate Length = 917 | Back alignment and structure |
|
| >pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase Type I Complexed With Glucose And Glucose-6-Phosphate Length = 917 | Back alignment and structure |
|
| >pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And Inhibitor Glucose-6-Phosphate Length = 918 | Back alignment and structure |
|
| >pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of Human Hk3 Length = 445 | Back alignment and structure |
|
| >pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose Length = 451 | Back alignment and structure |
|
| >pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide Activator Length = 455 | Back alignment and structure |
|
| >pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase Length = 451 | Back alignment and structure |
|
| >pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism: Observation Of Multiple Distinct Protein Conformations Length = 473 | Back alignment and structure |
|
| >pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase Length = 455 | Back alignment and structure |
|
| >pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A Synthetic Activator Length = 455 | Back alignment and structure |
|
| >pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose Length = 469 | Back alignment and structure |
|
| >pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And Activator Showing A Mobile Flap Length = 470 | Back alignment and structure |
|
| >pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation Length = 470 | Back alignment and structure |
|
| >pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct Amino Acid Sequence Length = 486 | Back alignment and structure |
|
| >pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I Length = 485 | Back alignment and structure |
|
| >pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With Glucose Length = 485 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 489 | |||
| 1bdg_A | 451 | Hexokinase; phosphotransferase; HET: GLC; 2.60A {S | 1e-159 | |
| 3o8m_A | 485 | Hexokinase; rnaseh-like fold, glycolysis, glucose | 1e-157 | |
| 3f9m_A | 470 | Glucokinase; hexokinase IV, ATP-binding, diabetes | 1e-157 | |
| 3hm8_A | 445 | Hexokinase-3; glucose, glucose-6-phosphate, non-pr | 1e-152 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 1e-151 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 1e-138 | |
| 2yhx_A | 457 | Hexokinase B; transferase(phosphoryl,alcohol accep | 1e-130 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 2ch5_A | 347 | NAGK protein; transferase, N-acetylglucosamine, gl | 6e-04 |
| >1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 Length = 451 | Back alignment and structure |
|---|
Score = 459 bits (1182), Expect = e-159
Identities = 159/460 (34%), Positives = 244/460 (53%), Gaps = 25/460 (5%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNER 89
+ + ++ K + + D M MR GL + +KM SYV P G E
Sbjct: 8 LFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTET 67
Query: 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKF 149
G F ALDLGGTN+RVL V L G+ + + + IP E M G+ ELF +IA LA F
Sbjct: 68 GNFLALDLGGTNYRVLSVTLEGKGKSPR-IQERTYCIPAEKMSGSGTELFKYIAETLADF 126
Query: 150 AEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEA 209
E + + ++ ++GFTFSFP Q + L++WTKGFS G G +V L
Sbjct: 127 LEN-----NGMKDKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTE 181
Query: 210 MERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKS 269
++++ L+++ A+VNDTVGTLA D V +I+GTGTN Y+E + + G K
Sbjct: 182 LDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGVKE 241
Query: 270 PSGRTIINTEWGAFSKG----LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVL 325
P +INTEWGAF + T+FD+ MD S++PG+Q+YEK +SGMYLGE+VR ++
Sbjct: 242 P--EVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHII 299
Query: 326 LKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVES-SLKA 384
+ + E+ LF +PE+L + L T ++ +++D + L L D V
Sbjct: 300 VYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPID 359
Query: 385 RKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRR 444
++V C+ +VKR LAGAGI IL++I+ V +DG LY+ + ++
Sbjct: 360 NRIVRYACEMVVKRAAYLAGAGIACILRRINRSEV--------TVGVDGSLYKFHPKFCE 411
Query: 445 YVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSK 484
+ + V +L + ++DGSG GAA +A++ ++
Sbjct: 412 RMTDMVDKLKPKN--TRFCLRLSEDGSGKGAAAIAASCTR 449
|
| >3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Length = 485 | Back alignment and structure |
|---|
Score = 455 bits (1171), Expect = e-157
Identities = 153/482 (31%), Positives = 247/482 (51%), Gaps = 26/482 (5%)
Query: 14 PRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGEL 73
P+ P ++ ++V ++ + L+ +R++ +++ GL GG +
Sbjct: 6 PKKPPARKGSM-ADVPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKGG-NI 63
Query: 74 KMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCG 133
MI +V PTG E G F ALDLGGTN RV+ V+LGG + T + +P L G
Sbjct: 64 PMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLVKLGGNHDFD--TTQNKYRLPDHLRTG 121
Query: 134 TSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFS 193
TSE+L+ FIA L +F ++ + +GFTFS+P Q I+SGVL +WTKGF
Sbjct: 122 TSEQLWSFIAKCLKEFVDEW---YPDGVSEPLPLGFTFSYPASQKKINSGVLQRWTKGFD 178
Query: 194 VSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNAC 253
+ G G DVV L E +E+ + + V AL+NDT GTL + Y D + +I+GTG N
Sbjct: 179 IEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGA 238
Query: 254 YVEQMDAIPKLQG----NKSPSGRTIINTEWGAFSKG---LPLTEFDRDMDAASINPGEQ 306
Y + + I KL+G + P IN E+G+F LP T++D +D S PG+Q
Sbjct: 239 YYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQ 298
Query: 307 IYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQ 366
+EK SG YLGEI+R VLL + + G +F + KL +V+ T + ++ D E+L+
Sbjct: 299 AFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLE 358
Query: 367 AVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKR 426
+E+++ RK++ ++ + + R RL G+ +I K +
Sbjct: 359 DTDDLFKTNLNIETTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGYKTA------- 411
Query: 427 TVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISK----NVVIEHTKDGSGIGAALLASAN 482
+A DG ++ Y Y+ +A+ ++ ++ K + + +DGSG+GAA++A
Sbjct: 412 -HIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLT 470
Query: 483 SK 484
K
Sbjct: 471 QK 472
|
| >3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* Length = 470 | Back alignment and structure |
|---|
Score = 452 bits (1165), Expect = e-157
Identities = 160/458 (34%), Positives = 252/458 (55%), Gaps = 24/458 (5%)
Query: 36 LTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFY 93
+ ++ E L+ V M +M GL ++ E +KM+ +YV + P G+E G F
Sbjct: 21 VEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFL 80
Query: 94 ALDLGGTNFRVLRVQLGGQEE--RVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAE 151
+LDLGGTNFRV+ V++G EE T+ + SIP++ M GT+E LFD+I+ ++ F +
Sbjct: 81 SLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLD 140
Query: 152 KEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME 211
K H + ++ +GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++
Sbjct: 141 K-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIK 195
Query: 212 RQG-LDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSP 270
R+G +M V A+VNDTV T+ Y D V +I+GTG NACY+E+M + ++G
Sbjct: 196 RRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---D 252
Query: 271 SGRTIINTEWGAFSKG----LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLL 326
GR +NTEWGAF L E+DR +D +S NPG+Q+YEK I G Y+GE+VR VLL
Sbjct: 253 EGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLL 312
Query: 327 KMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARK 386
++ +E LF E+L T + ++ D + Q + G+ S
Sbjct: 313 RLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQI--YNILSTLGLRPSTTDCD 370
Query: 387 VVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYV 446
+V C+++ R + AG+ ++ ++ E + + R V +DG +Y+ + ++
Sbjct: 371 IVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDV--MRITVGVDGSVYKLHPSFKERF 428
Query: 447 HEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSK 484
H +V L S + +++GSG GAAL+++ K
Sbjct: 429 HASVRRLTP---SCEITFIESEEGSGRGAALVSAVACK 463
|
| >3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens} Length = 445 | Back alignment and structure |
|---|
Score = 441 bits (1134), Expect = e-152
Identities = 168/455 (36%), Positives = 248/455 (54%), Gaps = 25/455 (5%)
Query: 35 ILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYA 94
+L + L V M M GL + L+M+ ++V A P G+ERG F A
Sbjct: 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEAS-SLRMLPTFVRATPDGSERGDFLA 63
Query: 95 LDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEA 154
LDLGGTNFRVL V++ + E SIP+ + G+ ++LFD I + F +K
Sbjct: 64 LDLGGTNFRVLLVRVTTGVQITS----EIYSIPETVAQGSGQQLFDHIVDCIVDFQQK-- 117
Query: 155 GKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG 214
G+ +GFTFSFP +Q +D G+L+ WTKGF S G+DVV+ L EA+ R+
Sbjct: 118 ---QGLSGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQ 174
Query: 215 -LDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGR 273
+++ V A+VNDTVGT+ Y D + +I+GTGTNACY+E++ + + G SGR
Sbjct: 175 AVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGR 231
Query: 274 TIINTEWGAF----SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMA 329
IN EWGAF S + T FD +D ASINPG+Q +EK ISGMYLGEIVR +LL +
Sbjct: 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLT 291
Query: 330 EEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVI 389
G LF ++L + +T + ++ D S L+ V + L D+ G+ + +V+
Sbjct: 292 SLGVLFRGQQIQRLQTRDIFKTKFLSEIESD-SLALRQVRAILEDL-GLPLTSDDALMVL 349
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
EVC + +R +L GAG+ ++++KI E+ V +DG LY+ + ++ V
Sbjct: 350 EVCQAVSQRAAQLCGAGVAAVVEKIRENRGL--EELAVSVGVDGTLYKLHPRFSSLVAAT 407
Query: 450 VTELLGTEISKNVVIEHTKDGSGIGAALLASANSK 484
V EL V ++DGSG GAAL+ + +
Sbjct: 408 VRELAP---RCVVTFLQSEDGSGKGAALVTAVACR 439
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Length = 917 | Back alignment and structure |
|---|
Score = 454 bits (1169), Expect = e-151
Identities = 168/483 (34%), Positives = 251/483 (51%), Gaps = 22/483 (4%)
Query: 9 CISRTPRGGPRFTMAVRSNVNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVD 68
+S + G + + + + +L V M A+M GL
Sbjct: 443 LLSESGSGKGAAMVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQ 502
Query: 69 GGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI 126
+KM+ S+V P G E G F ALDLGGTNFRVL V++ ++R + +I
Sbjct: 503 THNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAI 562
Query: 127 PQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLI 186
P E+M GT EELFD I + ++ F + +G + +GFTFSFP +QTS+D+G+LI
Sbjct: 563 PIEIMQGTGEELFDHIVSCISDFLDY-----MGIKGPRMPLGFTFSFPCQQTSLDAGILI 617
Query: 187 KWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVGTLAGARYWDEDVMVAVI 245
WTKGF + G DVV L +A++R+ D+ V A+VNDTVGT+ Y + V +I
Sbjct: 618 TWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLI 677
Query: 246 LGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG----LPLTEFDRDMDAASI 301
+GTG+NACY+E+M + ++G G+ IN EWGAF T +DR +D S+
Sbjct: 678 VGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSL 734
Query: 302 NPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDY 361
N G+Q YEK ISGMYLGEIVR +L+ ++G LF + E L + T + ++ D
Sbjct: 735 NAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDR 794
Query: 362 SEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421
LQ + G+ S+ +V VC + +R +L GAG+ +++ KI E+
Sbjct: 795 LALLQV--RAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGL- 851
Query: 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASA 481
V +DG LY+ + + R +H+ V EL NV ++DGSG GAAL+ +
Sbjct: 852 -DRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSP---KCNVSFLLSEDGSGKGAALITAV 907
Query: 482 NSK 484
+
Sbjct: 908 GVR 910
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Length = 917 | Back alignment and structure |
|---|
Score = 421 bits (1082), Expect = e-138
Identities = 164/461 (35%), Positives = 252/461 (54%), Gaps = 22/461 (4%)
Query: 36 LTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFY 93
+ K L ++ +M+ GL D +KM+ ++V ++P G+E+G F
Sbjct: 22 IDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFI 81
Query: 94 ALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKE 153
ALDLGG++FR+LRVQ+ ++ + E E P+ ++ G+ +LFD +A L F EK
Sbjct: 82 ALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEK- 140
Query: 154 AGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQ 213
+ ++ +GFTFSFP +Q+ ID +LI WTK F SG G DVV LN+A++++
Sbjct: 141 ----RKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKR 196
Query: 214 G-LDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSG 272
G D + A+VNDTVGT+ Y D+ V +I+GTGTNACY+E++ I ++G G
Sbjct: 197 GDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEG---DEG 253
Query: 273 RTIINTEWGAFSKG----LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKM 328
R INTEWGAF TEFDR +DA S+NPG+Q++EK +SGMYLGE+VR +L+KM
Sbjct: 254 RMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKM 313
Query: 329 AEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVV 388
A+EG LF + +L T + A++++ A + GVE S V
Sbjct: 314 AKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNA--KEILTRLGVEPSDDDCVSV 371
Query: 389 IEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHE 448
VC + R L A + +IL ++ ++ RT V +DG LY+ + QY R H+
Sbjct: 372 QHVCTIVSFRSANLVAATLGAILNRLRDNKGTP--RLRTTVGVDGSLYKTHPQYSRRFHK 429
Query: 449 AVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFDHDY 489
+ L+ +V ++ GSG GAA++ + + +
Sbjct: 430 TLRRLVP---DSDVRFLLSESGSGKGAAMVTAVAYRLAEQH 467
|
| >2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A Length = 457 | Back alignment and structure |
|---|
Score = 383 bits (985), Expect = e-130
Identities = 85/460 (18%), Positives = 148/460 (32%), Gaps = 33/460 (7%)
Query: 34 PILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFY 93
++ P +L+ V +T + M+ +V +G + G F
Sbjct: 7 SLVEVHXXVFIVPPXILQAVVSILTTRXDDXD--SSAASIPMVPGWVLKQVSGAQAGSFL 64
Query: 94 ALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKE 153
A+ +GG + V+ + L G++E + +L+ A A F+ E
Sbjct: 65 AIVMGGGDLEVILISLAGRQESS--IXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXE 122
Query: 154 AGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQ 213
+GFTF + + G + FS++ +++ + A
Sbjct: 123 ----FSSXAGSVPLGFTFXEAGAKEXVIKGQITXQAXAFSLAX--LXKLISAMXNAXFPA 176
Query: 214 GLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQ--GNKSPS 271
G A + D+ G L Y D + + +I G+G NA Y I G +
Sbjct: 177 GDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGGA 236
Query: 272 GRTIINTEWGAFSKG---LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKM 328
G I + +F K LP + ++ S + + K G+ +R VL+
Sbjct: 237 GXMXICCDQSSFRKAFPSLPQIXYLXTLNXXS-PXAXKTFXKNSXAKNXGQSLRDVLMXF 295
Query: 329 AEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVV 388
G V T + +Q+ DL+ G+ + VV
Sbjct: 296 KXXGQXH-XXXAXSFXAANVENTSYPAKIQKLPHFDLRXXXDLFXGDQGIAXKTXMKXVV 354
Query: 389 IEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHE 448
I RL I +I QK +A G Y+ +
Sbjct: 355 RRXLFLIAAYAFRLVVCXIXAICQKKGY--------SSGHIAAXGSXR-SYSGFSXNSAT 405
Query: 449 AVTELLGTEI----SKNVVIEHTKDGSGIGAALL---ASA 481
+ G SK + I DG G + ++ ASA
Sbjct: 406 XNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASA 445
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 2e-05
Identities = 65/429 (15%), Positives = 123/429 (28%), Gaps = 108/429 (25%)
Query: 7 SLCISRTPRG--GPRFTMAVRSNVNVSVAPILTKLQKECAAP--LPVLRNVADAMTADMR 62
L P + ++ ++ S+ L +L K L VL NV +A +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIH-SIQAELRRLLKSKPYENCLLVLLNVQNAKAWN-- 260
Query: 63 AGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFE 122
+ K++L T + + L T L +
Sbjct: 261 ---AFNLS--CKILL-------TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 123 QV------SIPQELMCGTS--------EELFDFIAT-------GLAKFAEK-EAGKFHLP 160
+ +P+E + T+ E + D +AT K E+ L
Sbjct: 309 KYLDCRPQDLPRE-VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367
Query: 161 QGRQREIGFTFS-FPVKQTSIDSGVL-IKWTKGFSVSGTAGKDVVACLNEAM-ERQGLDM 217
R++ S FP I + +L + W + V ++ E+Q +
Sbjct: 368 PAEYRKMFDRLSVFP-PSAHIPTILLSLIWFD--VIKSDVMVVVNKLHKYSLVEKQPKES 424
Query: 218 RVS----------------ALVNDTVGTLAGARYWDEDVMVAVILGT------G---TNA 252
+S AL V + +D D ++ L G N
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484
Query: 253 CYVEQMDAIPKLQGNKSPSGRTIIN--TEWGAFSKGLP-LTEFD--RDMDAASINPGEQI 307
+ E+M + + + I + T W A L L + + I +
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY----ICDNDPK 540
Query: 308 YEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQA 367
YE + I+ L EE ++ + + ++ L A
Sbjct: 541 YE-----RLVNAILD--FLPKIEEN---------------LICSKYTDLLRI----ALMA 574
Query: 368 VGSTLYDVA 376
+++ A
Sbjct: 575 EDEAIFEEA 583
|
| >2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Length = 347 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 6e-04
Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
+ I ++ G + G IV++L +ID + G +++ + + A
Sbjct: 232 PLSRYIFRKAGEMLGRHIVAVLPEIDPV--LFQGKIGLPILCVGSVWKSWELLKEGFLLA 289
Query: 450 VTE---LLGTEISKNVVIEHTKDGSGIGAALLA--SANSKFDHDY 489
+T+ + + + + S +G A L DY
Sbjct: 290 LTQGREIQAQNFFSSFTLMKLRHSSALGGASLGARHIGHLLPMDY 334
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 489 | |||
| 3f9m_A | 470 | Glucokinase; hexokinase IV, ATP-binding, diabetes | 100.0 | |
| 3hm8_A | 445 | Hexokinase-3; glucose, glucose-6-phosphate, non-pr | 100.0 | |
| 3o8m_A | 485 | Hexokinase; rnaseh-like fold, glycolysis, glucose | 100.0 | |
| 1bdg_A | 451 | Hexokinase; phosphotransferase; HET: GLC; 2.60A {S | 100.0 | |
| 2yhx_A | 457 | Hexokinase B; transferase(phosphoryl,alcohol accep | 100.0 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 100.0 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 100.0 | |
| 3vgl_A | 321 | Glucokinase; ROK family, transferase; HET: BGC ANP | 99.98 | |
| 2qm1_A | 326 | Glucokinase; alpha-beta structure, putative helix- | 99.97 | |
| 1z05_A | 429 | Transcriptional regulator, ROK family; structural | 99.97 | |
| 1z6r_A | 406 | MLC protein; transcriptional repressor, ROK family | 99.97 | |
| 3vov_A | 302 | Glucokinase, hexokinase; ROK, sugar kinase, transf | 99.97 | |
| 3r8e_A | 321 | Hypothetical sugar kinase; ribonuclease H-like mot | 99.97 | |
| 4db3_A | 327 | Glcnac kinase, N-acetyl-D-glucosamine kinase; stru | 99.97 | |
| 2hoe_A | 380 | N-acetylglucosamine kinase; TM1224, structural gen | 99.97 | |
| 4htl_A | 297 | Beta-glucoside kinase; structural genomics, sugar | 99.97 | |
| 2ap1_A | 327 | Putative regulator protein; zinc binding protein, | 99.96 | |
| 3htv_A | 310 | D-allose kinase, allokinase; NP_418508.1, structur | 99.96 | |
| 2yhw_A | 343 | Bifunctional UDP-N-acetylglucosamine 2-epimerase/N | 99.96 | |
| 2aa4_A | 289 | Mannac kinase, putative N-acetylmannosamine kinase | 99.95 | |
| 3mcp_A | 366 | Glucokinase; structural genomics, joint center for | 99.95 | |
| 3epq_A | 302 | Putative fructokinase; SCRK, ADP binding, PSI2, MC | 99.95 | |
| 2gup_A | 292 | ROK family protein; sugar kinase, streptococcus pn | 99.95 | |
| 1sz2_A | 332 | Glucokinase, glucose kinase; ATP-dependent, glucos | 99.94 | |
| 2q2r_A | 373 | Glucokinase 1, putative; ATPase hexose kinase fami | 99.93 | |
| 1woq_A | 267 | Inorganic polyphosphate/ATP-glucomannokinase; tran | 99.9 | |
| 2e2o_A | 299 | Hexokinase; acetate and sugar kinases, HSP70, acti | 99.88 | |
| 2ch5_A | 347 | NAGK protein; transferase, N-acetylglucosamine, gl | 99.88 | |
| 1saz_A | 381 | Probable butyrate kinase 2; askha (acetate and sug | 99.87 | |
| 3lm2_A | 226 | Putative kinase; structural genomics, joint center | 99.84 | |
| 1zc6_A | 305 | Probable N-acetylglucosamine kinase; NESG, Q7NU07_ | 99.8 | |
| 1zbs_A | 291 | Hypothetical protein PG1100; alpha-beta protein., | 99.79 | |
| 1zxo_A | 291 | Conserved hypothetical protein Q8A1P1; NESG, BTR25 | 99.79 | |
| 3ifr_A | 508 | Carbohydrate kinase, FGGY; xylulose kinase, SGX, s | 97.62 | |
| 4e1j_A | 520 | Glycerol kinase; structural genomics, PSI-biology, | 97.41 | |
| 2p3r_A | 510 | Glycerol kinase; glycerol metabolism, allosteric r | 97.4 | |
| 2dpn_A | 495 | Glycerol kinase; thermus thermophilus HB8, structu | 97.28 | |
| 1hux_A | 270 | Activator of (R)-2-hydroxyglutaryl-COA dehydratase | 97.24 | |
| 2w40_A | 503 | Glycerol kinase, putative; closed conformation, ma | 97.23 | |
| 3g25_A | 501 | Glycerol kinase; IDP00743, ATP-binding, glycerol m | 97.23 | |
| 2zf5_O | 497 | Glycerol kinase; hyperthermophilic archaeon, ATP-b | 97.22 | |
| 3h3n_X | 506 | Glycerol kinase; ATP-binding, glycerol metabolism, | 97.2 | |
| 2itm_A | 484 | Xylulose kinase, xylulokinase; ATPase, FGGY kinase | 97.18 | |
| 4ehu_A | 276 | Activator of 2-hydroxyisocaproyl-COA dehydratase; | 97.15 | |
| 2d4w_A | 504 | Glycerol kinase; alpha and beta protein, ribonucle | 97.13 | |
| 3bex_A | 249 | Type III pantothenate kinase; actin-like fold, ATP | 96.95 | |
| 3ezw_A | 526 | Glycerol kinase; glycerol metabolism, allosteric r | 96.92 | |
| 3l0q_A | 554 | Xylulose kinase; xlylulose kinase, SGX, PSI, struc | 96.82 | |
| 3hz6_A | 511 | Xylulokinase; xylulose, structural genomic, chromo | 96.72 | |
| 3ll3_A | 504 | Gluconate kinase; xylulose kinase, nysgx, ATP, ADP | 96.64 | |
| 3jvp_A | 572 | Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su | 96.58 | |
| 2uyt_A | 489 | Rhamnulokinase; rhamnose degradation, IN-LINE phos | 96.46 | |
| 3djc_A | 266 | Type III pantothenate kinase; structural genomics, | 96.25 | |
| 3i8b_A | 515 | Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 | 96.05 | |
| 3h6e_A | 482 | Carbohydrate kinase, FGGY; novosphingobium aromati | 95.96 | |
| 2h3g_X | 268 | Biosynthetic protein; pantothenate kinase, anthrax | 92.53 | |
| 4bc3_A | 538 | Xylulose kinase; transferase, glucuronate xyluloki | 91.79 | |
| 2ych_A | 377 | Competence protein PILM; cell cycle, type IV pilus | 87.52 | |
| 3qfu_A | 394 | 78 kDa glucose-regulated protein homolog; HSP70, K | 87.47 | |
| 4gni_A | 409 | Putative heat shock protein; HSP70-type ATPase, AT | 86.55 | |
| 3h1q_A | 272 | Ethanolamine utilization protein EUTJ; ethanolamin | 86.44 | |
| 3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP c | 86.32 |
| >3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-112 Score=890.93 Aligned_cols=441 Identities=36% Similarity=0.632 Sum_probs=401.3
Q ss_pred cchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccC--CCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEE
Q 011283 31 SVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDG--GGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQ 108 (489)
Q Consensus 31 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~ 108 (489)
+..+.++++.++|.++.++|++|+++|++||++||++++ .|+++||||||+++|+|+|+|.|||||+|||||||++|+
T Consensus 16 ~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 16 MKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEEE
Confidence 355667788888999999999999999999999998753 488999999999999999999999999999999999999
Q ss_pred eCCcc--ceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceee
Q 011283 109 LGGQE--ERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLI 186 (489)
Q Consensus 109 l~g~~--~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li 186 (489)
+.|++ .+.++..+++|+||++++.+++++||||||+||++|+++++.. .+.+++|||||||++|+++++|+|+
T Consensus 96 L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~Li 170 (470)
T 3f9m_A 96 VGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILL 170 (470)
T ss_dssp EEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEEC
T ss_pred ECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEEE
Confidence 97653 2244455568999999999999999999999999999987642 4679999999999999999999999
Q ss_pred eeccceeeecCCCchHHHHHHHHHHhcC-cceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeecccccccc
Q 011283 187 KWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQ 265 (489)
Q Consensus 187 ~wtKgf~~~~~~G~dv~~lL~~al~~~~-l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~ 265 (489)
+|||||++++++|+||+++|+++++|++ +||+|+||+|||||||++++|.+++|.||+|+|||+|+||+|+.++|++++
T Consensus 171 ~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~~ 250 (470)
T 3f9m_A 171 NWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVE 250 (470)
T ss_dssp CCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSS
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeecccccccc
Confidence 9999999999999999999999999998 799999999999999999999999999999999999999999999999998
Q ss_pred CCcCCCCCeeeeccccccc--CC--CcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccc
Q 011283 266 GNKSPSGRTIINTEWGAFS--KG--LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPE 341 (489)
Q Consensus 266 g~~~~~g~miIn~E~G~f~--~~--lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~ 341 (489)
+ ..++|+||||||.|. +. +|+|+||..+|+.|.|||+|+||||+||+|||||+|++++++++++.||.+..|+
T Consensus 251 ~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~ 327 (470)
T 3f9m_A 251 G---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASE 327 (470)
T ss_dssp C---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCCT
T ss_pred C---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCcH
Confidence 6 567899999999993 34 4799999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcc
Q 011283 342 KLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421 (489)
Q Consensus 342 ~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~ 421 (489)
.|.++|.|+|++||.|++|++++ ..+..++++ ++++++.+|++++++||++|.+|||+|+|++|+||+++++.....
T Consensus 328 ~L~~~~~l~T~~ls~ie~d~~~~-~~~~~il~~-l~~~~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~- 404 (470)
T 3f9m_A 328 QLRTRGAFETRFVSQVESDTGDR-KQIYNILST-LGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSE- 404 (470)
T ss_dssp TTTSTTCSCHHHHHHHHTCCSSC-HHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-
T ss_pred HhcCCCCcCchHHhhhccCCCch-HHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-
Confidence 99999999999999999999888 788888876 888867799999999999999999999999999999999864211
Q ss_pred cccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhcccccc
Q 011283 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFD 486 (489)
Q Consensus 422 ~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~~ 486 (489)
...+++|++|||+|++||.|+++++++++++++ .++|+|++++|||++|||++||+++|.+
T Consensus 405 -~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~---~~~v~l~~a~DGSg~GAAliAa~a~~~~ 465 (470)
T 3f9m_A 405 -DVMRITVGVDGSVYKLHPSFKERFHASVRRLTP---SCEITFIESEEGSGRGAALVSAVACKKA 465 (470)
T ss_dssp -SSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHHHHHTC--
T ss_pred -cccceEEEEeccHHHhCchHHHHHHHHHHHHcC---CCeEEEEEcCCCcHHHHHHHHHHHHHHH
Confidence 123589999999999999999999999999873 4689999999999999999999998875
|
| >3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-109 Score=861.33 Aligned_cols=434 Identities=38% Similarity=0.641 Sum_probs=395.9
Q ss_pred hhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEeCCcc
Q 011283 34 PILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQE 113 (489)
Q Consensus 34 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~g~~ 113 (489)
+.++++.++|.+++++|++|+++|++||++||+.++ |+++||||||+++|+|+|+|+|||||+|||||||++|++.|.
T Consensus 4 ~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~- 81 (445)
T 3hm8_A 4 RLLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG- 81 (445)
T ss_dssp HHHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc-
Confidence 456677778889999999999999999999998764 889999999999999999999999999999999999999764
Q ss_pred ceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeecccee
Q 011283 114 ERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFS 193 (489)
Q Consensus 114 ~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtKgf~ 193 (489)
....+++|+||++++.+++++||||||+||.+|+++++.. ++.+|+|||||||++|+++++|+|++|||||+
T Consensus 82 ---~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~ 153 (445)
T 3hm8_A 82 ---VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFK 153 (445)
T ss_dssp ---EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCC
T ss_pred ---eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeecccc
Confidence 2223347999999999999999999999999999987642 46799999999999999999999999999999
Q ss_pred eecCCCchHHHHHHHHHHhc-CcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccCCcCCCC
Q 011283 194 VSGTAGKDVVACLNEAMERQ-GLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSG 272 (489)
Q Consensus 194 ~~~~~G~dv~~lL~~al~~~-~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g 272 (489)
+++++|+||+++|+++++|+ ++||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.++|+++++ +.+
T Consensus 154 ~~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~ 230 (445)
T 3hm8_A 154 ASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSG 230 (445)
T ss_dssp CBTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSS
T ss_pred CCCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCC
Confidence 99999999999999999987 58999999999999999999999999999999999999999999999999875 457
Q ss_pred Ceeeecccccc-c-CCC--cccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcccccccccc
Q 011283 273 RTIINTEWGAF-S-KGL--PLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFV 348 (489)
Q Consensus 273 ~miIn~E~G~f-~-~~l--p~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~ 348 (489)
+|+||||||.| . +.+ |+|+||..+|+.|.|||+|+||||+||+|||||+|+++.++++++.||.+..|+.|.++|.
T Consensus 231 ~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~ 310 (445)
T 3hm8_A 231 RMCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDI 310 (445)
T ss_dssp EEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTC
T ss_pred cEEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCC
Confidence 99999999999 3 333 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeE
Q 011283 349 LRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTV 428 (489)
Q Consensus 349 ~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~ 428 (489)
|+|++||.|++|++ ++..+..++++ ++++++.+|+.++++||.+|.+|||+|+|++|+|+++++++.... ...+++
T Consensus 311 l~T~~ls~ie~D~~-~~~~~~~~l~~-l~~~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~--~~~~~~ 386 (445)
T 3hm8_A 311 FKTKFLSEIESDSL-ALRQVRAILED-LGLPLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGL--EELAVS 386 (445)
T ss_dssp SCHHHHHHHTCTTC-CHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--SSEEEE
T ss_pred CCcHHHHHHhcCCc-hHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--cccCcE
Confidence 99999999998865 46667888876 898888999999999999999999999999999999999763221 113579
Q ss_pred EEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhccccccC
Q 011283 429 VAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFDH 487 (489)
Q Consensus 429 I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~~~ 487 (489)
|++|||||++||.|+++++++++++.+. ++|+|++++|||++|||++||+++|..+
T Consensus 387 VgvDGsvy~~~P~f~~~l~~~l~~l~~~---~~v~~~~s~DGSg~GAAl~AA~a~~~~~ 442 (445)
T 3hm8_A 387 VGVDGTLYKLHPRFSSLVAATVRELAPR---CVVTFLQSEDGSGKGAALVTAVACRLAQ 442 (445)
T ss_dssp EEEECHHHHHCTTHHHHHHHHHHHHCTT---EEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEeceehccChhHHHHHHHHHHHhCCC---CcEEEEECCCCchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998653 5799999999999999999999988654
|
| >3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-109 Score=871.19 Aligned_cols=444 Identities=34% Similarity=0.592 Sum_probs=410.0
Q ss_pred CcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEE
Q 011283 28 VNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107 (489)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV 107 (489)
.++++++.+++++++|.++.++|++|+++|++||++||++++ ++++||||||+++|+|+|+|+|||||+|||||||++|
T Consensus 19 ~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~V 97 (485)
T 3o8m_A 19 VPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLV 97 (485)
T ss_dssp SCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEEE
T ss_pred CcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEEE
Confidence 556788999999999999999999999999999999998764 6899999999999999999999999999999999999
Q ss_pred EeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeee
Q 011283 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIK 187 (489)
Q Consensus 108 ~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~ 187 (489)
++.|+.. .....++|+||++++.+++++||+|||+||.+|+++++... ..+.+++|||||||++|+++++|+|++
T Consensus 98 ~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li~ 172 (485)
T 3o8m_A 98 KLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQR 172 (485)
T ss_dssp EEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEECC
T ss_pred EECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEee
Confidence 9977532 12223479999999988899999999999999999875321 145789999999999999999999999
Q ss_pred eccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccC-
Q 011283 188 WTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQG- 266 (489)
Q Consensus 188 wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g- 266 (489)
|||||++++++|+||+++|+++++|+++||+|+||+||||||||+++|.++++.||+|+|||+|+||+++.++|+|+++
T Consensus 173 wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~~ 252 (485)
T 3o8m_A 173 WTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGL 252 (485)
T ss_dssp CCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTTT
T ss_pred ccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeecccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred ---CcCCCCCeeeecccccc-cC--CCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcc
Q 011283 267 ---NKSPSGRTIINTEWGAF-SK--GLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340 (489)
Q Consensus 267 ---~~~~~g~miIn~E~G~f-~~--~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~ 340 (489)
..+..++|+||||||.| +. .||+|+||..+|+.|.|||+|+||||+||+|||||+|++++++++++.||.+..|
T Consensus 253 ~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~~ 332 (485)
T 3o8m_A 253 LPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDI 332 (485)
T ss_dssp CCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSCC
T ss_pred ccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCCc
Confidence 22456789999999999 33 5799999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCc
Q 011283 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNG 420 (489)
Q Consensus 341 ~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~ 420 (489)
+.|.++|+|+|++||.|++|+++++..+..+|.+.++++++.+|++++++||++|.+|||+|+|++|+|+++++++
T Consensus 333 ~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~---- 408 (485)
T 3o8m_A 333 SKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGY---- 408 (485)
T ss_dssp GGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 9999999999999999999999999999999999899988889999999999999999999999999999999997
Q ss_pred ccccceeEEEecCccccchhHHHHHHHHHHHHhhCccc----ccceEEEeccCCcchhHHHHhhccccc
Q 011283 421 AIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEI----SKNVVIEHTKDGSGIGAALLASANSKF 485 (489)
Q Consensus 421 ~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~----~~~v~i~~a~Dgs~iGAA~~aa~~~~~ 485 (489)
+.++|++|||||++||.|++++++++++++.... .++|+|++++|||++|||++||++++.
T Consensus 409 ----~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~~ 473 (485)
T 3o8m_A 409 ----KTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKR 473 (485)
T ss_dssp ----SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHHH
T ss_pred ----CceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999986322 568999999999999999999998775
|
| >1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-102 Score=816.63 Aligned_cols=437 Identities=37% Similarity=0.614 Sum_probs=400.3
Q ss_pred ccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccc--cCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEE
Q 011283 30 VSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVV--DGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107 (489)
Q Consensus 30 ~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~--~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV 107 (489)
+.+.+.+++|+++|.++.++|++|+++|++||++||+. +..|+++||||||+++|+|+|+|+|||||||||||||++|
T Consensus 6 ~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V 85 (451)
T 1bdg_A 6 QQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSV 85 (451)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEEE
Confidence 34567889999999999999999999999999999984 2358899999999999999999999999999999999999
Q ss_pred EeCC-ccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceee
Q 011283 108 QLGG-QEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLI 186 (489)
Q Consensus 108 ~l~g-~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li 186 (489)
++.| ++. .....++|+||++++.+++++||+|||++|++|+++++.. .+.+++|||||||++|+++++|+|+
T Consensus 86 ~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l~ 158 (451)
T 1bdg_A 86 TLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATLV 158 (451)
T ss_dssp EECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEEC
T ss_pred ecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEEe
Confidence 9987 431 1112237999999888889999999999999999886632 3459999999999999999999999
Q ss_pred eeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccC
Q 011283 187 KWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQG 266 (489)
Q Consensus 187 ~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g 266 (489)
+|||||++++|+|+||+++|+++++|+++||+|++|+||||||+++++|.++++.||+|+|||+|+||+++++.|+|+++
T Consensus 159 ~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~g 238 (451)
T 1bdg_A 159 RWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDG 238 (451)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGCS
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CcCCCCCeeeecccccc-cCC---CcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcccc
Q 011283 267 NKSPSGRTIINTEWGAF-SKG---LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEK 342 (489)
Q Consensus 267 ~~~~~g~miIn~E~G~f-~~~---lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~ 342 (489)
. +.|||+||+|||+| +.. +|+|+||..+|..|+|||+||||||+||+||||++|+++.++.+++.+|.+..|+.
T Consensus 239 ~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~~ 316 (451)
T 1bdg_A 239 V--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPER 316 (451)
T ss_dssp C--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCSG
T ss_pred C--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchHh
Confidence 4 67999999999999 322 79999999999999999999999999999999999999999999888999999999
Q ss_pred ccccccccCcccccccccCchhHhhhhhhhhhhcccc-cccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcc
Q 011283 343 LSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421 (489)
Q Consensus 343 l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~-~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~ 421 (489)
+..++.++|++||.|++|+++++..++.++++.++++ ++.+|+++++++|+.|++|+|+++|++|++++++++|
T Consensus 317 l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~~----- 391 (451)
T 1bdg_A 317 LKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINR----- 391 (451)
T ss_dssp GGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred hcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 9999999999999999999999999999998867876 3799999999999999999999999999999999998
Q ss_pred cccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhccccc
Q 011283 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKF 485 (489)
Q Consensus 422 ~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~ 485 (489)
+.++|++|||||+++|.|++++++++++++.+ ..+|++.+++|||++|||++|++++|.
T Consensus 392 ---~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~--~~~i~~~l~~dgs~iGAAllA~~~~~~ 450 (451)
T 1bdg_A 392 ---SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPK--NTRFCLRLSEDGSGKGAAAIAASCTRQ 450 (451)
T ss_dssp ---SEEEEEEESHHHHHCTTHHHHHHHHHHHHSCT--TCEEEEEECTTHHHHHHHHHHTTC---
T ss_pred ---CceEEEEeCchhcCchhHHHHHHHHHHHHhCC--CCcEEEEECCCccHHHHHHHHHHHhhc
Confidence 45789999999999999999999999998766 458999999999999999999998875
|
| >2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-97 Score=783.38 Aligned_cols=433 Identities=19% Similarity=0.254 Sum_probs=393.6
Q ss_pred hhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEeCCc
Q 011283 33 APILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQ 112 (489)
Q Consensus 33 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~g~ 112 (489)
++.+++|+++|.+|.++|++|+++|++||+ ||+.+ .|+++||||||+++|+|+|+|+||||||||||+|+++|++.|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~-~~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSS-AASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSS-SCSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCC-CCCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 467889999999999999999999999999 99875 3789999999999999999999999999999999999999875
Q ss_pred cceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeeccce
Q 011283 113 EERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGF 192 (489)
Q Consensus 113 ~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtKgf 192 (489)
.. .+...+++++|++.+.++++++|+||+++|++|+++++.. ..+.+++|||||||++|+++++|.|++|+|||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 21 1122247899988777889999999999999999876422 13467999999999999999999998999999
Q ss_pred eeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccCCc-C-C
Q 011283 193 SVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNK-S-P 270 (489)
Q Consensus 193 ~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~-~-~ 270 (489)
++++|+ ||+++|+++++|+++|++|++|+||||||+|+|+|+++++.||+|+|||+|+||+++.++|+++++.. . .
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999999 99999999999999999999999999999999999999999999999999999999999999986532 2 4
Q ss_pred CCCeeeeccccccc---CCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccccc
Q 011283 271 SGRTIINTEWGAFS---KGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPF 347 (489)
Q Consensus 271 ~g~miIn~E~G~f~---~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~ 347 (489)
.|+|+||+|||+|. ..+|+|+||..+|..|.||| ||||||+||+||||++|+++.++.+++.+|.+ .|+.|..+|
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~~~l~~~~ 313 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XAXSFXAAN 313 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CCCSCCSTT
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cchhccccc
Confidence 68999999999993 24799999999999999999 99999999999999999999999998889999 999999999
Q ss_pred cccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCccccccee
Q 011283 348 VLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRT 427 (489)
Q Consensus 348 ~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~ 427 (489)
+|+|++||.++.|++++++.++.++.+.++++++.+|+++++++|..|++|||+|+|++|+++++++++ ++.
T Consensus 314 ~~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~--------~~~ 385 (457)
T 2yhx_A 314 VENTSYPAKIQKLPHFDLRXXXDLFXGDQGIAXKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGY--------SSG 385 (457)
T ss_dssp CSCTHHHHHHHHCCSSSCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC--------SSE
T ss_pred CcChHHHHHHhcCCchhhhHHHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------CcE
Confidence 999999999999988888889999977788878899999999999999999999999999999999997 347
Q ss_pred EEEecCccccchhHHHHHHHHHHHHhhCccc----ccceEEEeccCCcchhHHHHhhcccccc
Q 011283 428 VVAMDGGLYEHYTQYRRYVHEAVTELLGTEI----SKNVVIEHTKDGSGIGAALLASANSKFD 486 (489)
Q Consensus 428 ~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~----~~~v~i~~a~Dgs~iGAA~~aa~~~~~~ 486 (489)
+|++|||| ++||.|++++++++++++.+.. ..+|+|++++|||++|||++||+++++.
T Consensus 386 ~V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~~~ 447 (457)
T 2yhx_A 386 HIAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASAXX 447 (457)
T ss_dssp EEEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHHHH
T ss_pred EEEEECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhhhh
Confidence 89999999 9999999999999999986532 5689999999999999999999987764
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-94 Score=816.06 Aligned_cols=439 Identities=38% Similarity=0.626 Sum_probs=394.8
Q ss_pred hhhHHHHHhhhcCChhHHHHHHHHHhHhhhcccccc--CCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEeC
Q 011283 33 APILTKLQKECAAPLPVLRNVADAMTADMRAGLVVD--GGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLG 110 (489)
Q Consensus 33 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~ 110 (489)
.+.++++.++|.++.++|++|+++|++||++||+++ ..|+++||||||+++|+|+|+|+|||||||||||||++|++.
T Consensus 467 ~~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~ 546 (917)
T 1cza_N 467 HRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIR 546 (917)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEE
T ss_pred chhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeC
Confidence 345678889999999999999999999999999854 358899999999999999999999999999999999999996
Q ss_pred CccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeecc
Q 011283 111 GQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTK 190 (489)
Q Consensus 111 g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtK 190 (489)
+...++++..+++|+||++++.+++++||+|||+||.+|+++++.. .+.+++|||||||++|+++++|.|++|||
T Consensus 547 ~g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtK 621 (917)
T 1cza_N 547 SGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTK 621 (917)
T ss_dssp CSTTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCT
T ss_pred CCcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceec
Confidence 3322245444457999999888889999999999999999876532 35679999999999999999999999999
Q ss_pred ceeeecCCCchHHHHHHHHHHhc-CcceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccccCCcC
Q 011283 191 GFSVSGTAGKDVVACLNEAMERQ-GLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKS 269 (489)
Q Consensus 191 gf~~~~~~G~dv~~lL~~al~~~-~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~ 269 (489)
||++++++|+||+++|+++++|+ ++||++++|+||||||+|+++|.++++.||+|+|||+|+||++++++|+++.+
T Consensus 622 gf~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g--- 698 (917)
T 1cza_N 622 GFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG--- 698 (917)
T ss_dssp TCCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---
T ss_pred ccccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---
Confidence 99999999999999999999887 79999999999999999999999999999999999999999999999999864
Q ss_pred CCCCeeeecccccc-c-CC--CcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccc
Q 011283 270 PSGRTIINTEWGAF-S-KG--LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSM 345 (489)
Q Consensus 270 ~~g~miIn~E~G~f-~-~~--lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~ 345 (489)
+.|||+||+|||.| + .. +|+|+||..+|+.|.|||+||||||+||+||||++|+++.++.+++.+|.+..|+.+.+
T Consensus 699 ~~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~ 778 (917)
T 1cza_N 699 DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKT 778 (917)
T ss_dssp CSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTS
T ss_pred CcCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhcc
Confidence 67999999999999 3 23 48999999999999999999999999999999999999999999889999999999999
Q ss_pred cccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccc
Q 011283 346 PFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGK 425 (489)
Q Consensus 346 ~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~ 425 (489)
++.++|++||.|+.|+++ +..++.+++. ++++++.+|+++++++|..|++|||+|+|++|++++++++|+... ...
T Consensus 779 ~~~~~t~~ls~ie~d~~~-~~~~~~i~~~-~~~~~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~~--~~~ 854 (917)
T 1cza_N 779 RGIFETKFLSQIESDRLA-LLQVRAILQQ-LGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGL--DRL 854 (917)
T ss_dssp TTCSCHHHHHHHTCSSCC-HHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--SSE
T ss_pred CCccchHHhhhhhcCcch-hhHHHHHHHH-hCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--Ccc
Confidence 999999999999999874 5567778875 787778899999999999999999999999999999999874321 112
Q ss_pred eeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhcccccc
Q 011283 426 RTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKFD 486 (489)
Q Consensus 426 ~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~~ 486 (489)
+.+|++|||||++||.|+++++++++++.+ .++|+|+.++|||++|||++||++.|++
T Consensus 855 ~~~V~vdGsv~~~~p~f~~~~~~~l~~l~~---~~~v~~~~~~dgsg~GAAl~aa~~~~~~ 912 (917)
T 1cza_N 855 NVTVGVDGTLYKLHPHFSRIMHQTVKELSP---KCNVSFLLSEDGSGKGAALITAVGVRLR 912 (917)
T ss_dssp EEEEEEECHHHHHCTTHHHHHHHHHHHHST---TEEEEEEECSSCSHHHHHHHHHHHHHHH
T ss_pred ceEEEECCHHHHcCcHHHHHHHHHHHHhCC---CCceEEEEecCChHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999863 2479999999999999999999988764
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-85 Score=740.97 Aligned_cols=441 Identities=38% Similarity=0.631 Sum_probs=390.0
Q ss_pred CcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccC--CCCcceeehhcccCcCCCccccEEEEecCCcceEEE
Q 011283 28 VNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDG--GGELKMILSYVDALPTGNERGLFYALDLGGTNFRVL 105 (489)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~ 105 (489)
.++++.+.+++|.++|.++.++|++|+++|++||++||+.+. .|+++||||||+++|+|+|+|+||||||||||+|++
T Consensus 14 ~~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~ 93 (917)
T 1cza_N 14 LKDDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRIL 93 (917)
T ss_dssp --CHHHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEE
Confidence 445566678999999999999999999999999999998643 478999999999999999999999999999999999
Q ss_pred EEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeecccccccccee
Q 011283 106 RVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVL 185 (489)
Q Consensus 106 lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~l 185 (489)
+|++.|++...++...+++++|++++.+++++||+||+++|++|+++++.. .+.+++|||||||++|+++++|+|
T Consensus 94 lv~~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l 168 (917)
T 1cza_N 94 RVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAIL 168 (917)
T ss_dssp EEEEEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEE
T ss_pred EEEecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEE
Confidence 999976422222222237899988777789999999999999999876532 245689999999999999999999
Q ss_pred eeeccceeeecCCCchHHHHHHHHHHhcC-cceEeeeeeccccccccccccccCceEEEEEecCCcceeEEeeccccccc
Q 011283 186 IKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKL 264 (489)
Q Consensus 186 i~wtKgf~~~~~~G~dv~~lL~~al~~~~-l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie~~~~i~~~ 264 (489)
++|+|||++++|+|+||+++|+++++|++ +|+++++|+||||||+|+|+|.++++.||+|+|||+|+||++++++|+++
T Consensus 169 ~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~ 248 (917)
T 1cza_N 169 ITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLV 248 (917)
T ss_dssp CCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTS
T ss_pred EecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccc
Confidence 99999999999999999999999999887 89989999999999999999999999999999999999999999988888
Q ss_pred cCCcCCCCCeeeecccccc-c-CC--CcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcc
Q 011283 265 QGNKSPSGRTIINTEWGAF-S-KG--LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340 (489)
Q Consensus 265 ~g~~~~~g~miIn~E~G~f-~-~~--lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~ 340 (489)
.| ..|||+||+|||+| . .. .|+|+||..+|..|+|||+||||||+||+||||++|+++.++.+++.+|.+..+
T Consensus 249 ~G---~~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~ 325 (917)
T 1cza_N 249 EG---DEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRIT 325 (917)
T ss_dssp SC---CSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCC
T ss_pred cC---CCCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccc
Confidence 76 36899999999999 3 22 369999999999999999999999999999999999999999888888887778
Q ss_pred ccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhh--hccC
Q 011283 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKI--DEDS 418 (489)
Q Consensus 341 ~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~--~~~~ 418 (489)
+.+..++.++++++++++ ++++++..+..+++. ++++++.+|++.++++|+.|++|+|+++|++|+++++++ +|..
T Consensus 326 ~~l~~~~~l~t~~vs~~~-~~~~~~~~~~~i~~~-~~~~~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~dp~~ 403 (917)
T 1cza_N 326 PELLTRGKFNTSDVSAIE-KNKEGLHNAKEILTR-LGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGT 403 (917)
T ss_dssp TTTTSTTSSCHHHHHHHT-CTTTHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhccccccChHHHHHHh-cccccHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 888888999999999999 567778888888876 777778899999999999999999999999999999999 6621
Q ss_pred CcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhccccc
Q 011283 419 NGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASANSKF 485 (489)
Q Consensus 419 ~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~~~~ 485 (489)
. ..+.+|++||||++++|.|++++++++++++ +. .+++|+.++|||++|||++||++++.
T Consensus 404 ~----~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~-~~--~~~~i~~a~dgs~~GAA~laa~~~~l 463 (917)
T 1cza_N 404 P----RLRTTVGVDGSLYKTHPQYSRRFHKTLRRLV-PD--SDVRFLLSESGSGKGAAMVTAVAYRL 463 (917)
T ss_dssp S----SEEEEEEEECHHHHHCSSHHHHHHHHHHHHC-TT--EEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred c----CcceEEEECCchhhccHHHHHHHHHHHHHhc-CC--CceEEEEeccchHHHHHHHHHhHhhh
Confidence 1 1246899999999999999999999999987 32 57999999999999999999987764
|
| >3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.8e-32 Score=273.12 Aligned_cols=307 Identities=18% Similarity=0.183 Sum_probs=225.8
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
+++|+||+|||++|++++++.|+ ++.+. +++.| .+.+++++.|++.+.+++++ .+...+|+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~---i~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~---------~~i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGR---ILSTF--KVATP-----PTAEGIVDAICAAVAGASEG---------HDVEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC---BCCCE--EEECC-----SSHHHHHHHHHHHHHHHHTT---------CCEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhh---------cCceEEEE
Confidence 47899999999999999999874 55432 23332 34788999999999998753 24688999
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEE
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVI 245 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglI 245 (489)
++|+|++. ++|.+.. + .++ +|.+.++.+.|++.+ ++|| .|+||+++++++|.|. +.++.+.++
T Consensus 63 ~~pG~vd~---~~g~v~~-~--~~l-~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~~~l~ 129 (321)
T 3vgl_A 63 GAAGYVDD---KRATVLF-A--PNI-DWRHEPLKDKVEQRV---GLPV---VVENDANAAAWGEYRFGAGQGHDDVICIT 129 (321)
T ss_dssp EESSEECT---TSSCEEE-C--SSS-CCEEECHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEE
T ss_pred eccccEeC---CCCEEEe-C--CCC-CCcCCCHHHHHhhhh---CCCE---EEEehhhhHHHHHHHhCCCCCCCCEEEEE
Confidence 99999985 3454442 1 122 455779999999998 8997 7999999999999874 568999999
Q ss_pred ecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHH
Q 011283 246 LGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVL 325 (489)
Q Consensus 246 lGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l 325 (489)
+|||++++++.+++.+++.++.++|.|||.++.+ |..| .|++. +|+|.++|+.+|.+.++...
T Consensus 130 ~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~-g~~c--------------~cG~~--gclE~~~S~~al~~~~~~~~ 192 (321)
T 3vgl_A 130 LGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPD-GLLC--------------GCGSQ--GCWEQYASGRALVRYAKQRA 192 (321)
T ss_dssp ESSSEEEEEEETTEECCCTTSCCCCGGGSBSSTT-CSBC--------------TTSCB--SBGGGTSSHHHHHHHHHHHH
T ss_pred eCcceEEEEEECCEEecCCCCCCccccceEecCC-CCCC--------------CCCCc--CcHHHhcCHHHHHHHHHHHh
Confidence 9999999999999999999988899999999754 5443 36764 79999999999976666543
Q ss_pred HHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccc
Q 011283 326 LKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGA 405 (489)
Q Consensus 326 ~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa 405 (489)
.... .. +..+........ .......+++. ++..+..|+.+++++++++|.
T Consensus 193 ~~~~-----------~~--------~~~~~~~~~~~~-~~~~~~~i~~~----------a~~gD~~a~~~~~~~~~~La~ 242 (321)
T 3vgl_A 193 NATP-----------EN--------AAVLLGLGDGSV-DGIEGKHISEA----------ARQGDPVAVDSFRELARWAGA 242 (321)
T ss_dssp HHCG-----------GG--------CHHHHHTTTSSS-TTCCHHHHHHH----------HHTTCHHHHHHHHHHHHHHHH
T ss_pred hcCC-----------cc--------hhhhhhcccCcc-ccCCHHHHHHH----------HHcCCHHHHHHHHHHHHHHHH
Confidence 2210 00 000000000000 00012233433 233458999999999999999
Q ss_pred hhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhC-cccccceEEEec---cCCcchhHHHHhhc
Q 011283 406 GIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLG-TEISKNVVIEHT---KDGSGIGAALLASA 481 (489)
Q Consensus 406 ~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~-~~~~~~v~i~~a---~Dgs~iGAA~~aa~ 481 (489)
+|+++++.++| + .|+++|++....+.|.+.+++.+++... +.....++|+.+ +|++++|||.++..
T Consensus 243 ~i~~l~~~l~p--------~--~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~~ 312 (321)
T 3vgl_A 243 GLADLASLFDP--------S--AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQ 312 (321)
T ss_dssp HHHHHHHHHCC--------S--EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHhCC--------C--EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHHh
Confidence 99999999998 2 5999999999999999999999998764 333456777766 79999999988765
Q ss_pred cccc
Q 011283 482 NSKF 485 (489)
Q Consensus 482 ~~~~ 485 (489)
.-..
T Consensus 313 ~~~~ 316 (321)
T 3vgl_A 313 GLEH 316 (321)
T ss_dssp C---
T ss_pred hhhh
Confidence 4443
|
| >2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=268.52 Aligned_cols=310 Identities=18% Similarity=0.172 Sum_probs=226.7
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
+++|+||+|||++|++++++.|+ ++.+. +++.|.. .+.+++++.+.+.|.+++++.+... .+...+|+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~~igi 73 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMKK----EDFVGIGM 73 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCCG----GGEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCCc----cceeEEEE
Confidence 57899999999999999999874 55433 3444432 3467899999999999998765321 35688999
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCc-hHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEE
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGK-DVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAV 244 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~-dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~igl 244 (489)
++|+|++. .+|.+.. +. ++ +|.+. ++.+.|++.+ ++|| .|.||+++++++|+|. +.++.+.+
T Consensus 74 ~~pG~vd~---~~g~v~~-~~--~l-~w~~~~~l~~~l~~~~---~~pv---~v~ND~~aaa~~e~~~g~~~~~~~~~~l 140 (326)
T 2qm1_A 74 GTPGSVDI---EKGTVVG-AY--NL-NWTTVQPVKEQIESAL---GIPF---ALDNDANVAALGERWKGAGENNPDVIFI 140 (326)
T ss_dssp EESSEEET---TTTEEEC-BG--GG-TBCSCBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred ecccceeC---CCCEEEe-cC--CC-CccCCchHHHHHHHHh---CCCE---EEecHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 99999975 3465542 21 22 46678 9999999988 7887 7999999999999874 46789999
Q ss_pred EecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHH
Q 011283 245 ILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRV 324 (489)
Q Consensus 245 IlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~ 324 (489)
++|||++++++.+++.+++.++.++|.|||.++.+ |..| .|++ .+|+|.++|+.+|.+.++..
T Consensus 141 ~~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~-g~~c--------------~cG~--~gcle~~~s~~~l~~~~~~~ 203 (326)
T 2qm1_A 141 TLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPN-GFDC--------------TCGK--RGCLETVSSATGVVRVARHL 203 (326)
T ss_dssp EESSSEEEEEEETTEECCCSSSCTTCGGGSBSCTT-SCBC--------------TTSS--BCBTHHHHSHHHHHHHHHHH
T ss_pred EECCceEEEEEECCEEeecCCCcccccCcEEECCC-CCcC--------------CCCC--ccchHhhhCHHHHHHHHHHH
Confidence 99999999999999999998888899999999864 4333 3565 47999999999996655432
Q ss_pred HHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCcccc
Q 011283 325 LLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAG 404 (489)
Q Consensus 325 l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~a 404 (489)
+ ... ..+..+. .+..+. ... ....+++. ++..+..|..+++++++++|
T Consensus 204 ~----~~~-----~~~~~~~-----------~~~~~~-~~~-~~~~v~~~----------a~~gd~~a~~i~~~~~~~L~ 251 (326)
T 2qm1_A 204 S----EEF-----AGDSELK-----------QAIDDG-QDV-SSKDVFEF----------AEKGDHFALMVVDRVCFYLG 251 (326)
T ss_dssp T----TTC-----CSCCHHH-----------HHHHHT-CCC-CHHHHHHH----------HHTTCHHHHHHHHHHHHHHH
T ss_pred h----hcc-----cccchhh-----------hccccc-cCC-CHHHHHHH----------HHcCCHHHHHHHHHHHHHHH
Confidence 1 100 0000000 000000 000 12223332 22345899999999999999
Q ss_pred chhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhhc
Q 011283 405 AGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLASA 481 (489)
Q Consensus 405 a~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa~ 481 (489)
.+++++++.++| + .|+++|++....+.|.+.+++.+++...+.....++|+.+ +|++.+|||.++..
T Consensus 252 ~~i~~l~~~l~p--------~--~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 252 LATGNLGNTLNP--------D--SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp HHHHHHHHHHCC--------S--EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred HHHHHHHHhcCC--------C--EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 999999999998 3 5999999999999999999999988754322234666654 68899999998765
Q ss_pred cc
Q 011283 482 NS 483 (489)
Q Consensus 482 ~~ 483 (489)
..
T Consensus 322 ~~ 323 (326)
T 2qm1_A 322 FS 323 (326)
T ss_dssp GC
T ss_pred hh
Confidence 43
|
| >1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=273.75 Aligned_cols=343 Identities=16% Similarity=0.198 Sum_probs=246.7
Q ss_pred HHHhhhcCChhHHHHHHHHHhHhhhccccccCC----CC---cceeehhcccCcCCCccccEEEEecCCcceEEEEEEeC
Q 011283 38 KLQKECAAPLPVLRNVADAMTADMRAGLVVDGG----GE---LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLG 110 (489)
Q Consensus 38 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s~---~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~ 110 (489)
++.+.+.++..++.+++++|.+ +||-.+.. |+ -+.+-++. .+.+++|+||+|||++|++++++.
T Consensus 58 ela~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~------~~~~~~lGIDiGgt~i~~~l~d~~ 128 (429)
T 1z05_A 58 DLSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN------NLGWQFLSMRLGRGYLTIALHELG 128 (429)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC------CTTEEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC------CCCCEEEEEEECCCEEEEEEECCC
Confidence 4455666777788888887776 56633211 00 11111111 245789999999999999999998
Q ss_pred CccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeecc
Q 011283 111 GQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTK 190 (489)
Q Consensus 111 g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtK 190 (489)
|+ ++.+. +++.+. .+.+++++.|++.|.+++++.+.. ..+...+|+++|+|++. .+|.+. +..
T Consensus 129 G~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~ 191 (429)
T 1z05_A 129 GE---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAITLPGLVNS---EQGIVL-QMP 191 (429)
T ss_dssp SC---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEEESSEEET---TTTEEE-ECS
T ss_pred CC---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceEEEEEeccCcEeC---CCCeEe-ecC
Confidence 74 55433 344432 247899999999999999876532 14578899999999985 346554 221
Q ss_pred ceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEecCCcceeEEeeccccccccC
Q 011283 191 GFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVILGTGTNACYVEQMDAIPKLQG 266 (489)
Q Consensus 191 gf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIlGTG~Na~yie~~~~i~~~~g 266 (489)
+++ |.+.|+.+.|++.+ ++|| .|.||+++++++|.|. +.++.+.+++|||+|++++.+++.+.+.++
T Consensus 192 --~l~-w~~~~l~~~L~~~~---~~pV---~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g 262 (429)
T 1z05_A 192 --HYN-VKNLALGPEIYKAT---GLPV---FVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHG 262 (429)
T ss_dssp --SSB-CSSBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCTTTT
T ss_pred --CCC-CCCCCHHHHHHHHh---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCEEeeCCCC
Confidence 232 67889999999988 8997 7999999999999874 568999999999999999999999999888
Q ss_pred CcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCcccccccc
Q 011283 267 NKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMP 346 (489)
Q Consensus 267 ~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~ 346 (489)
.++|.|||.++.. |..| .|++. +|+|.++|+..|.+.++..+ ..+ . .+.+.
T Consensus 263 ~AGEiGH~~v~~~-g~~c--------------~cG~~--gclE~~~S~~al~~~~~~~~----~~~-----~-~~~l~-- 313 (429)
T 1z05_A 263 NIGELGHIQIDPQ-GKRC--------------HCGNY--GCLETVASSQAIRDQVTARI----QAG-----E-PSCLA-- 313 (429)
T ss_dssp CTTBCTTSBCCTT-CCBC--------------TTSCB--SBTHHHHSHHHHHHHHHHHH----HTT-----C-CCTTT--
T ss_pred cccccCceEEcCC-CCCC--------------CCCCC--cchHHHhCHHHHHHHHHHHh----hcc-----c-ccccc--
Confidence 8899999999854 4333 36664 79999999999965554322 111 0 01010
Q ss_pred ccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccce
Q 011283 347 FVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKR 426 (489)
Q Consensus 347 ~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~ 426 (489)
+.. .. ....+++. ++..+..|..+++++++++|.+++++++.++| +
T Consensus 314 ---~~~---------~~---~~~~i~~~----------a~~gD~~a~~il~~~~~~L~~~i~~l~~~ldP--------~- 359 (429)
T 1z05_A 314 ---TVE---------EI---SIEDICAA----------AADGDPLAVDVIQQLGRYLGAAIAIVINLFNP--------E- 359 (429)
T ss_dssp ---TCS---------SC---CHHHHHHH----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S-
T ss_pred ---ccc---------CC---CHHHHHHH----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------C-
Confidence 000 00 12223332 23345889999999999999999999999998 3
Q ss_pred eEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhh
Q 011283 427 TVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 427 ~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
.|+++|++....+.|.+.+++.+++...+.....++|+.+ +| +.+|||.++.
T Consensus 360 -~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 360 -KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp -EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred -EEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 5999999999999999999999987644322235666655 67 9999998765
|
| >1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=272.32 Aligned_cols=346 Identities=14% Similarity=0.121 Sum_probs=247.4
Q ss_pred HHHhhhcCChhHHHHHHHHHhHhhhccccccCC----CCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEeCCcc
Q 011283 38 KLQKECAAPLPVLRNVADAMTADMRAGLVVDGG----GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQE 113 (489)
Q Consensus 38 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~g~~ 113 (489)
++.+.+.++..++.+++++|.+ +||-.+.. |+----|+.+.-- .+.+++|+||+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~---~~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVE---TEAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEEC---CTTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEc---CCccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 5556677888888888888876 57643211 1111122222211 24578999999999999999999874
Q ss_pred ceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeecccee
Q 011283 114 ERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFS 193 (489)
Q Consensus 114 ~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtKgf~ 193 (489)
++.+. +++.|. .+.+++++.+.+.+.+++++.+.. ..+...+|+++|+|++. ++|.+. +.. +
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~--~ 169 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIIDT---ENGIVH-RMP--F 169 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEET---TTTEEE-ECT--T
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEeC---CCCEEe-cCC--C
Confidence 55433 234331 346789999999999999876532 24578899999999985 456665 332 3
Q ss_pred eecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEecCCcceeEEeeccccccccCCcC
Q 011283 194 VSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVILGTGTNACYVEQMDAIPKLQGNKS 269 (489)
Q Consensus 194 ~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~ 269 (489)
+++|.+.|+.+.|++.+ ++|| .|.||+++++++|.|. +.++.+.+++|||++++++.+++.+.+.++.++
T Consensus 170 l~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AG 243 (406)
T 1z6r_A 170 YEDVKEMPLGEALEQHT---GVPV---YIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLV 243 (406)
T ss_dssp CTTCSSBCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEETTTTSSCCB
T ss_pred CCCccCCCHHHHHHHHH---CCCE---EEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEEeecCCCcCc
Confidence 45677889999999998 8897 7999999999999874 567899999999999999999999999888889
Q ss_pred CCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccccccc
Q 011283 270 PSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVL 349 (489)
Q Consensus 270 ~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~ 349 (489)
|.|||.++.. |..| .|++. +|+|.++|+.+|-+.++..+ ... + +..+
T Consensus 244 EiGh~~v~~~-g~~c--------------~cG~~--gclE~~~S~~al~~~~~~~~---~~~---~----~~~~------ 290 (406)
T 1z6r_A 244 EIGHTQVDPY-GKRC--------------YCGNH--GCLETIASVDSILELAQLRL---NQS---M----SSML------ 290 (406)
T ss_dssp CGGGSBSCTT-SCBC--------------TTSCB--SBTHHHHSHHHHHHHHHHHH---TTC---T----TCGG------
T ss_pred cCCceEecCC-CCCC--------------CCCCc--cchHHHcCHHHHHHHHHHhh---hcc---c----cccc------
Confidence 9999999754 4333 36664 79999999999965544321 000 0 0000
Q ss_pred cCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEE
Q 011283 350 RTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVV 429 (489)
Q Consensus 350 ~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I 429 (489)
... .. ....+++. ++..+..|..+++++++++|.+++++++.++| + .|
T Consensus 291 ~~~---------~~---~~~~v~~~----------a~~gD~~a~~~l~~~~~~L~~~i~~l~~~ldP--------~--~I 338 (406)
T 1z6r_A 291 HGQ---------PL---TVDSLCQA----------ALRGDLLAKDIITGVGAHVGRILAIMVNLFNP--------Q--KI 338 (406)
T ss_dssp GSS---------CC---CHHHHHHH----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EE
T ss_pred Ccc---------cC---CHHHHHHH----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EE
Confidence 000 00 12233332 22345889999999999999999999999998 3 59
Q ss_pred EecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHh
Q 011283 430 AMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLA 479 (489)
Q Consensus 430 ~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~a 479 (489)
+++|++....+.|.+.+++.+++...+.....+.|+.+ +|++.+|||++.
T Consensus 339 vlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 339 LIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp EEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred EEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 99999999999999999999987744322235666654 789999998654
|
| >3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-31 Score=263.14 Aligned_cols=285 Identities=19% Similarity=0.194 Sum_probs=218.1
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
++|+||+|||++|++++++.+ ++.+. +++.|.. ..+++++.|.+.+.++++... .+...+|++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~----~l~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR----LLSKV--VVPTPKE----GGERVAEALAEAAERAEREAG-------VRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS----BSCCE--EEECCSS----CHHHHHHHHHHHHHHHHHHHT-------CCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCCC----cEEEE--EEcCCCC----ChHHHHHHHHHHHHHHHhhcc-------CCceEEEEE
Confidence 589999999999999999863 33321 3444432 237899999999999886542 356889999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEe
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVIL 246 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIl 246 (489)
+|+|++. ++|.+... .++++|.+.|+.+.|++.+ ++|| .|.||+++++++|.|. +.++.+.+++
T Consensus 65 ~pG~vd~---~~g~v~~~---~~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 132 (302)
T 3vov_A 65 TPGPLDF---RRGVIRFA---PNIPGVQDFPIRRILEEAT---GRPV---FLENDANAAALAEHHLGAAQGEESSLYLTV 132 (302)
T ss_dssp ESSCEET---TTTEEC------CCTTCTTCCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHSTTTTCSCEEEEEE
T ss_pred ecccEeC---CCCEEEcC---CCCCCcCCCChHHHHHHhh---CCCE---EEEechHHHHHHHHHhCCCCCCCCEEEEEE
Confidence 9999985 34655422 2556777899999999988 8997 7999999999999874 5689999999
Q ss_pred cCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHH
Q 011283 247 GTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLL 326 (489)
Q Consensus 247 GTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~ 326 (489)
|||+|++++.+++.+++.++.++|.|||.++.+ |..| .|++. +|+|.++|+.+|.+.++...
T Consensus 133 GtGiG~gii~~g~l~~G~~g~aGEiGh~~v~~~-g~~c--------------~cg~~--gclE~~~s~~~l~~~~~~~~- 194 (302)
T 3vov_A 133 STGIGGGVVLGGRVLRGERGQGGELGHLTLLPG-GPAC--------------GCGLE--GCLEALAAGRALERDATYAF- 194 (302)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBSSTT-CCBC--------------TTSCB--SBHHHHHSHHHHHHHHHHHH-
T ss_pred CCceeEEEEECCEEeeCCCCCCccccceEecCC-CCCC--------------CCCCc--chHHHHhCHHHHHHHHHHhh-
Confidence 999999999999999998888899999999754 4333 36664 79999999999955444311
Q ss_pred HHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccch
Q 011283 327 KMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAG 406 (489)
Q Consensus 327 ~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~ 406 (489)
. .. ++ ..++++. ++..+..|..+++++++++|.+
T Consensus 195 ---~----------~~------~~-----------------~~~i~~~----------a~~gd~~a~~~~~~~~~~l~~~ 228 (302)
T 3vov_A 195 ---Q----------RP------VD-----------------TRELFRL----------FQAGDPKAERLVLQAARYVGIG 228 (302)
T ss_dssp ---T----------SC------CC-----------------HHHHHHH----------HHTTCHHHHHHHHHHHHHHHHH
T ss_pred ---C----------CC------CC-----------------HHHHHHH----------HHcCCHHHHHHHHHHHHHHHHH
Confidence 0 00 01 1123332 2223488999999999999999
Q ss_pred hhHHHHhhhccCCcccccceeEEEecCccc-cchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhh
Q 011283 407 IVSILQKIDEDSNGAIFGKRTVVAMDGGLY-EHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 407 laaii~~~~~~~~~~~~~~~~~I~i~Gsv~-~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
++++++.++| + .|+++|++. ...+.|.+.+++.+++...+..... |+.+ +|++.+|||.++.
T Consensus 229 i~~l~~~~~p--------~--~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~--i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 229 LASLVKAFDP--------G--VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPP--LRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHHHHHCC--------S--EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCC--EEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHCC--------C--EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCc--EEEcCCCCcHHHHHHHHHHH
Confidence 9999999998 3 699999999 8899999999999998765432223 5544 7899999998875
|
| >3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=263.12 Aligned_cols=295 Identities=17% Similarity=0.211 Sum_probs=218.7
Q ss_pred ccccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 88 ERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 88 E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
..+++|+||+|||++|++++++.|+ ++.+. +++.+.. .+.+++++.|.+.+.++++ .. .+...+
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~-~~-------~~i~gi 80 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTADW---VNGIGFVESMKLEIGNFLK-QY-------PIVKGV 80 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHHH---HTTTCHHHHHHHHHHHHHH-HC-------TTCCEE
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCCC---CCHHHHHHHHHHHHHHHHh-cc-------CCeeEE
Confidence 4578999999999999999999874 55543 2343322 3578899999999999886 11 356889
Q ss_pred eeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEE
Q 011283 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVA 243 (489)
Q Consensus 168 G~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~ig 243 (489)
|+++|+|++. ++|.+...+ ++++|.+.++.+.|++.+. ++|| .|+||+++++++|.|. +.++.+.
T Consensus 81 gi~~pG~vd~---~~g~v~~~~---~l~~w~~~~l~~~l~~~~~--~~pV---~v~NDa~aaalaE~~~g~~~~~~~~v~ 149 (321)
T 3r8e_A 81 GIGWPGLVSL---DRTKVILLP---NIPSVVNVPIVEILRSEFP--HIHF---KIENDAKCAALGEYYFGENKRMQTFIL 149 (321)
T ss_dssp EEEESSEECT---TSCCEEEBT---TBCCCCSCCHHHHHHHHCT--TSEE---EEEEHHHHHHHHHHHHSTTTTCSSEEE
T ss_pred EEEecccEEC---CCCEEEeCC---CCccccCCCHHHHHHHHcC--CCCE---EEEchHHHHHHHHHHhCCCCCCCcEEE
Confidence 9999999984 456655322 4555778899999888652 5787 7999999999999874 5689999
Q ss_pred EEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHH
Q 011283 244 VILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRR 323 (489)
Q Consensus 244 lIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~ 323 (489)
+++|||++++++.+++.+++.++.++|.|||. +.. .+|+|.++|+.+|-+.++.
T Consensus 150 l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~-~~~-------------------------~gclE~~~S~~al~~~~~~ 203 (321)
T 3r8e_A 150 LALGTGVGSGVMMNGKLFIGGRGNGTEVGHML-TTR-------------------------GKSLENQVGINHLIAYTHE 203 (321)
T ss_dssp EEESSSEEEEEEETTEECCCTTSCCCCGGGCB-CTT-------------------------SSBSHHHHSHHHHHHHHHH
T ss_pred EEECCceEEEEEECCEEecCCCCCCccccccc-CCC-------------------------CCcHHHhcCHHHHHHHHHH
Confidence 99999999999999998888887776777766 411 3799999999999666554
Q ss_pred HHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccc
Q 011283 324 VLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLA 403 (489)
Q Consensus 324 ~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~ 403 (489)
.... .. +..+. +. ..... ....+++. ++..++.|+.+++++++++
T Consensus 204 ~~~~---~~-------~~~~~---------~~---~~~~~---~~~~i~~~----------a~~gD~~a~~~~~~~~~~L 248 (321)
T 3r8e_A 204 QLAL---DV-------AKKSS---------LH---TIAEL---SPKVIADH----------AAQGDALALAVWADIGTII 248 (321)
T ss_dssp HHHH---CT-------TCCCS---------GG---GCSSC---CHHHHHHH----------HHTTCHHHHHHHHHHHHHH
T ss_pred Hhhc---cC-------ccccc---------cc---ccccC---CHHHHHHH----------HHcCCHHHHHHHHHHHHHH
Confidence 3211 10 11000 00 00000 12233433 2334589999999999999
Q ss_pred cchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhh
Q 011283 404 GAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 404 aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
|.+|+++++.++| ..|+++|++....+.|.+.+++.+++...+.....++|+.+ +|++.+|||.++.
T Consensus 249 a~~i~~l~~~ldP----------~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 249 GESLVNIVRVMDL----------NNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp HHHHHHHHHHHCC----------CEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC----------CEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 9999999999998 36999999999999999999999998765443456778776 6889999998875
|
| >4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=262.06 Aligned_cols=285 Identities=20% Similarity=0.191 Sum_probs=218.4
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
++|+||+|||++|++++++.|+ ++.+. +++.|. .+.+++++.|.+.+.++..+.+ ....+|++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVATE--RVPTPT----DDYPLLLETIAGLVAKYDQEFA--------CEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCT----TCHHHHHHHHHHHHHHHHHHHT--------SCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEEE
Confidence 6899999999999999999875 55543 344443 2578899999999988876543 24679999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEEe
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVIL 246 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglIl 246 (489)
+|+|++. .+|.+. ++ +++.|.+.++.+.|++.+ ++|| .|+||+++++++|.|. +.++.+.+++
T Consensus 88 ~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~pV---~v~NDa~aaalgE~~~g~~~~~~~~~~l~~ 154 (327)
T 4db3_A 88 LPGMEDA---DDATVL-TV---NVPAAKGKPLRADLEAKI---GRSV---KIENDANCFALSEAWDEELQDAPSVMGLIL 154 (327)
T ss_dssp ESEEECT---TTCCEE-ES---SSGGGTTSCHHHHHHHHH---SSCC---EEEEHHHHHHHHHHTSTTTTTCSEEEEEEE
T ss_pred eeccEeC---CCCEEE-cC---CCccccCCCHHHHHHHHH---CCCE---EEecchhHHHHHHHHhCCCCCCCcEEEEEe
Confidence 9999985 345543 33 345567889999999998 8997 7999999999999874 5688999999
Q ss_pred cCCcceeEEeeccccccccCCcCCCCCeeeecc---------cccccCCCcccccccccccccCCcchhhhhhhhchhhH
Q 011283 247 GTGTNACYVEQMDAIPKLQGNKSPSGRTIINTE---------WGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYL 317 (489)
Q Consensus 247 GTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E---------~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yL 317 (489)
|||+|++++.+++.+++.++.++|.|||.++.. -|..| .|++ .+|+|.++|+.+|
T Consensus 155 GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~~~~~~~~~~~g~~C--------------~cG~--~gclE~~~S~~al 218 (327)
T 4db3_A 155 GTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGC--------------GCGK--KGCLDSYLSGRGF 218 (327)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBCCHHHHHHTCTTCCCCBC--------------TTSC--BSBGGGTSSHHHH
T ss_pred CccceEEEEECCEEeecCCCcCcccccEEeccccccccccccCCCcC--------------CCCC--cchhHhhhCHHHH
Confidence 999999999999999998888899999999752 13223 3566 4799999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhh
Q 011283 318 GEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVK 397 (489)
Q Consensus 318 gei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~ 397 (489)
.+..+... .+ .++ ...+++. ++..+..|+.+++
T Consensus 219 ~~~~~~~~--------------~~------~~~-----------------~~~i~~~----------a~~gD~~a~~~~~ 251 (327)
T 4db3_A 219 ELLYAHYY--------------GE------EKK-----------------AIDIIKA----------NAAGDEKAAEHVE 251 (327)
T ss_dssp HHHHHHHH--------------SC------CCC-----------------HHHHHHH----------HHHTCHHHHHHHH
T ss_pred HHHHHHhc--------------CC------CCC-----------------HHHHHHH----------HHcCCHHHHHHHH
Confidence 55444211 00 001 1123332 2233488999999
Q ss_pred cCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchh
Q 011283 398 RGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIG 474 (489)
Q Consensus 398 RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iG 474 (489)
++++++|.+|+++++.++| + .|+++|++... +.|.+.+++.+++.+.+. ...++|+.+ +|++.+|
T Consensus 252 ~~~~~La~~i~~l~~~l~p--------~--~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~-~~~~~i~~s~lg~~a~~~G 319 (327)
T 4db3_A 252 RFMELLAICFGNIFTANDP--------H--VVALGGGLSNF-ELIYEEMPKRVPKYLLSV-AKCPKIIKAKHGDSGGVRG 319 (327)
T ss_dssp HHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGC-THHHHHHHHHGGGGSCTT-CCCCEEEECSCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCC--------C--EEEEeCcccch-HHHHHHHHHHHHHHhccc-cCCCEEEECCCCCcHHHHH
Confidence 9999999999999999998 2 59999999886 678889999888776442 245777766 7899999
Q ss_pred HHHHhh
Q 011283 475 AALLAS 480 (489)
Q Consensus 475 AA~~aa 480 (489)
||.++.
T Consensus 320 Aa~l~l 325 (327)
T 4db3_A 320 AAFLNI 325 (327)
T ss_dssp HHHTTC
T ss_pred HHHHHh
Confidence 998764
|
| >2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=265.98 Aligned_cols=325 Identities=13% Similarity=0.155 Sum_probs=236.8
Q ss_pred HHHhhhcCChhHHHHHHHHHhHhhhccccccC---CCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEeCCccc
Q 011283 38 KLQKECAAPLPVLRNVADAMTADMRAGLVVDG---GGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEE 114 (489)
Q Consensus 38 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~---~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~g~~~ 114 (489)
++.+.+.++..++..+.++|.+ +||-.+. .|+-=-=|+.+.- -.+.+++|+||+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~---~~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKI---SPNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEE---CGGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEE---ccCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 4445566777777777777766 5663321 1111011111111 123568999999999999999999874
Q ss_pred eeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeeccceee
Q 011283 115 RVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSV 194 (489)
Q Consensus 115 ~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtKgf~~ 194 (489)
++.+. +++.+.. .+.+++++.+.+.|.+++++.+.. ..+...+|+++|+|++. .+|.+.. .. ++
T Consensus 110 -vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~~-~~--~l 173 (380)
T 2hoe_A 110 -ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKL----GSKLSALTVAAPGPIDT---ERGIIID-PR--NF 173 (380)
T ss_dssp -EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHT----TCCCCEEEEEESSCEET---TTTEECC-CS--SC
T ss_pred -EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCC----cCcEEEEEEEeeccEEC---CCCEEec-cC--CC
Confidence 55433 3444322 257889999999999998775421 13568899999999975 3455542 21 22
Q ss_pred ecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccC--ceEEEEEecCCcceeEEeeccccccccCCcCCCC
Q 011283 195 SGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE--DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSG 272 (489)
Q Consensus 195 ~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~--~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g 272 (489)
+|.+.++.+.|++.+ ++|| .|+||+++++++|.|.+. ++.+.+++|||+|++++.+++.+.+.++.++|.|
T Consensus 174 -~w~~~~l~~~l~~~~---~~pV---~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aGEiG 246 (380)
T 2hoe_A 174 -PLSQIPLANLLKEKY---GIEV---WVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIG 246 (380)
T ss_dssp -TTBTSCHHHHHHHHH---CSEE---EEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSCCCCGG
T ss_pred -CCcCCChHHHHHHHh---CCCE---EEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCcccccc
Confidence 466889999999988 8887 799999999999988654 8999999999999999999999999988889999
Q ss_pred CeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCc
Q 011283 273 RTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTP 352 (489)
Q Consensus 273 ~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~ 352 (489)
||.++.+ ..| .|++ .+|+|.++|+.+|.+ . .+
T Consensus 247 h~~v~~~--~~c--------------~cG~--~gclE~~~s~~~l~~-----------~-------------------~~ 278 (380)
T 2hoe_A 247 YTRVFNG--NEY--------------VFLE--DVCNENVVLKHVLSM-----------G-------------------FS 278 (380)
T ss_dssp GCEEECS--SSE--------------EEHH--HHHCHHHHHHHHHHH-----------C-------------------CC
T ss_pred ceEecCC--CCC--------------CCCC--ccHHHHHcCHHHHHH-----------H-------------------HH
Confidence 9999754 222 3454 589999999988833 0 00
Q ss_pred ccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEec
Q 011283 353 HICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMD 432 (489)
Q Consensus 353 ~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~ 432 (489)
. +++. ++..+..|..+++++++++|.+++++++.++| + .|+++
T Consensus 279 ~-----------------v~~~----------a~~gD~~a~~~l~~~~~~La~~i~~l~~~ldP--------~--~Ivlg 321 (380)
T 2hoe_A 279 S-----------------LAEA----------RDSGDVRVKEYFDDIARYFSIGLLNLIHLFGI--------S--KIVIG 321 (380)
T ss_dssp ------------------TTHH----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEE
T ss_pred H-----------------HHHH----------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EEEEc
Confidence 0 1111 11234788999999999999999999999998 3 58999
Q ss_pred CccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhh
Q 011283 433 GGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 433 Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
|++....+.|.+.+++.+++...+. ..++++.+ +|++.+|||.++.
T Consensus 322 G~~~~~~~~l~~~l~~~l~~~~~~~--~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 322 GFFKELGENFLKKIKIEVETHLLYK--HSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp EGGGGGHHHHHHHHHHHHHHHCSSS--CCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CchhhhhHHHHHHHHHHHHHhcCCC--CCcEEEEcCCCCcHHHHHHHHHHH
Confidence 9999989999999999998875432 34666654 6789999998864
|
| >4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=257.88 Aligned_cols=281 Identities=16% Similarity=0.202 Sum_probs=208.2
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
.++|+||+|||++|++++++.|+ ++.+. +++++. .+.+++++.+.+.+ .+. .+...+|+
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~~~----~~~--------~~i~gigi 62 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISG----SDGDQILAEMKVFL----AEN--------TDVTGIAV 62 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSC---EEEEE--EEECST----TCHHHHHHHHHHHH----HTC--------TTCCEEEE
T ss_pred cEEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHHHH----hhc--------CCeeEEEE
Confidence 36899999999999999999875 55543 344432 23456666655443 221 34688999
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEE
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVI 245 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglI 245 (489)
++|+|++. ++|.+..- .++++|.+.|+.+.|++.+ ++|| .|.||+++++++|+|. +.++.+.++
T Consensus 63 ~~pG~vd~---~~g~v~~~---~~l~~w~~~~l~~~l~~~~---~~pV---~v~NDa~aaal~E~~~g~~~~~~~~~~l~ 130 (297)
T 4htl_A 63 SAPGYVNP---KTGLITMG---GAIRRFDNFNLKEWLEAET---GLPV---AIENDANCALLAEKWLGKGQDLDDFLCLT 130 (297)
T ss_dssp EESSEECT---TTCEEEEC---TTCGGGTTEEHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEE
T ss_pred ecCcceeC---CCCEEEeC---CCCCCccCCCHHHHHHHHH---CcCE---EEecHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 99999985 45665432 2455677889999999988 8997 8999999999999874 568999999
Q ss_pred ecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHH
Q 011283 246 LGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVL 325 (489)
Q Consensus 246 lGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l 325 (489)
+|||++++++.+++.+++.++.++|.|||.++.. |.. .++.+|+|.++|+++|-+..+...
T Consensus 131 ~GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~~~-~~~------------------~~~~~~le~~~s~~~l~~~~~~~~ 191 (297)
T 4htl_A 131 IGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERP-GAF------------------RPGKYTLNETTTMLVLRRQYAELT 191 (297)
T ss_dssp ESSSEEEEEEETTEECCCTTSCCCCGGGSBSSCC-CSS------------------CGGGGBHHHHSSHHHHHHHHHHHH
T ss_pred ECcceEEEEEECCEEEecCCCCcccccceEecCC-CCc------------------CcccCcHHHhccHHHHHHHHHHHh
Confidence 9999999999999999998888889999988643 211 124579999999999955443211
Q ss_pred HHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccc
Q 011283 326 LKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGA 405 (489)
Q Consensus 326 ~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa 405 (489)
+ . +. ..++ ..++++. ++..+..|+.+++++++++|.
T Consensus 192 ------~-----~-~~-----~~~~-----------------~~~i~~~----------a~~gd~~a~~~~~~~~~~La~ 227 (297)
T 4htl_A 192 ------G-----R-PL-----EEIT-----------------GEEIFAN----------YDAHDAVSERLITEFYTGICT 227 (297)
T ss_dssp ------C-----C-CG-----GGCC-----------------HHHHHHH----------HHTTCHHHHHHHHHHHHHHHH
T ss_pred ------c-----C-Cc-----cCCC-----------------HHHHHHH----------HHcCCHHHHHHHHHHHHHHHH
Confidence 0 0 00 0011 1223332 223458899999999999999
Q ss_pred hhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhhc
Q 011283 406 GIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLASA 481 (489)
Q Consensus 406 ~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa~ 481 (489)
+|+++++.++| + .|+++|++... +.|.+.+++.+++... ..++|+.+ +|++.+|||.++..
T Consensus 228 ~i~~l~~~~~p--------~--~IvlgGgi~~~-~~~~~~l~~~l~~~~~----~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 228 GLYNLIYLFDP--------T--HIFIGGGITSR-PTFIAELKHHMESFGL----RDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp HHHHHHHHHCC--------S--EEEEESGGGGS-TTHHHHHHHHHTTTCC----TTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC--------C--EEEEeCccccc-HHHHHHHHHHHHHhcc----CCCeEEECCcCChHHHHhHHHHHHH
Confidence 99999999998 3 59999999985 7789999988875432 34667655 78999999988764
|
| >2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-30 Score=257.95 Aligned_cols=286 Identities=18% Similarity=0.202 Sum_probs=213.9
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
+++|+||+|||++|++++++.|+ ++.+. +++.+. .+.+++++.|.+.+.++....+ ....+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPH----TSYSAFLDAVCELVEEADQRFG--------VKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCC----SCHHHHHHHHHHHHHHHHHHHT--------SCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEE
Confidence 46899999999999999999874 55432 334332 1467889999998888876432 2467999
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEEE
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAVI 245 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~iglI 245 (489)
++|+|++. .+|++. ++ +++.|.+.|+.+.|++.+ ++|| .|+||+++++++|.+. +.++.++++
T Consensus 87 ~~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~pv---~v~NDa~aaalgE~~~g~~~~~~~~v~l~ 153 (327)
T 2ap1_A 87 GIPGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL---DRDV---RLDNDANCFALSEAWDDEFTQYPLVMGLI 153 (327)
T ss_dssp EESSBSCC---TTSCCB-CT---TCTTTTTSCHHHHHHHHH---TSCE---EEEEHHHHHHHHHHTSTTGGGCSEEEEEE
T ss_pred EeeeeEEC---CCCEEE-cc---CCCccCCCChHHHHHHHH---CCCE---EEecHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 99999975 345554 33 345567889999999988 7887 7999999999999875 467999999
Q ss_pred ecCCcceeEEeeccccccccCCcCCCCCeeeeccc---------ccccCCCcccccccccccccCCcchhhhhhhhchhh
Q 011283 246 LGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEW---------GAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMY 316 (489)
Q Consensus 246 lGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~---------G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~y 316 (489)
+|||++++++.+++.+++.++.++|.|||.++..+ |..| .|++ .+|+|.++|+..
T Consensus 154 ~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~~~~g~~c--------------~cG~--~gcle~~~s~~~ 217 (327)
T 2ap1_A 154 LGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRC--------------GCGQ--MGCIENYLSGRG 217 (327)
T ss_dssp ESSSEEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTSCCCBC--------------TTSC--BSBTHHHHSHHH
T ss_pred ECCcEEEEEEECCEEeecCCCcccccccEEEecCcccccccccCCCcC--------------CCCc--hhhHHHHhCHHH
Confidence 99999999999999988888888999999997553 2222 3566 479999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhh
Q 011283 317 LGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIV 396 (489)
Q Consensus 317 Lgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~ 396 (489)
|-+.++... ... .+ ...+++. ++..+..|+.++
T Consensus 218 l~~~~~~~~--------------~~~------~~-----------------~~~i~~~----------a~~gd~~a~~il 250 (327)
T 2ap1_A 218 FAWLYQHYY--------------DQS------LQ-----------------APEIIAL----------WEQGDEQAHAHV 250 (327)
T ss_dssp HHHHHHHHH--------------CCC------CC-----------------HHHHHHH----------HHTTCHHHHHHH
T ss_pred HHHHHHHhc--------------CCC------CC-----------------HHHHHHH----------HHcCCHHHHHHH
Confidence 855433211 000 00 1223332 222348899999
Q ss_pred hcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcch
Q 011283 397 KRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGI 473 (489)
Q Consensus 397 ~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~i 473 (489)
+++++++|.+++++++.++| + .|+++|++....+.|.+ +++.+++...+ ....++|+.+ ++++.+
T Consensus 251 ~~~~~~La~~i~~l~~~l~p--------~--~IvlgG~i~~~~~~~~~-l~~~l~~~~~~-~~~~~~i~~s~~~~~a~~~ 318 (327)
T 2ap1_A 251 ERYLDLLAVCLGNILTIVDP--------D--LLVIGGGLSNFTAITTQ-LAERLPRHLLP-VARAPRIERARHGDAGGMR 318 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGSTHHHHS-SGGGSGGGSCT-TCCCCEEEECSCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC--------C--EEEEeChhhcchhHHHH-HHHHHHHhhcc-ccCCCEEEEcCCCCcHHHH
Confidence 99999999999999999998 3 58999999988765555 88877766543 3345677765 688999
Q ss_pred hHHHHhh
Q 011283 474 GAALLAS 480 (489)
Q Consensus 474 GAA~~aa 480 (489)
|||.++.
T Consensus 319 GAa~lal 325 (327)
T 2ap1_A 319 GAAFLHL 325 (327)
T ss_dssp HHHHTTS
T ss_pred HHHHHHh
Confidence 9998763
|
| >3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-29 Score=251.70 Aligned_cols=285 Identities=16% Similarity=0.173 Sum_probs=189.5
Q ss_pred ccccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 88 ERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 88 E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
+.+++|+||+|||++|++++++.|+ ++.+. +++.|.. ..+++++.|.+.+.+++++.+ .+...+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gi 68 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAEV----IAPGLVSGIGEMIDEQLRRFN-------ARCHGL 68 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHHH----HTTCHHHHHHHHHHHHHHHHT-------EEEEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCccc----cHHHHHHHHHHHHHHHHHhcC-------CCeeEE
Confidence 4568999999999999999999884 55532 2333322 256788888888888876543 235789
Q ss_pred eeEEeeeccccccccceeeeeccceeeecC--CCchHHHHHHHHHHhcCcceEeeeeecccccccccccc---ccCceEE
Q 011283 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGT--AGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARY---WDEDVMV 242 (489)
Q Consensus 168 G~tfSfP~~q~~i~~g~li~wtKgf~~~~~--~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~---~~~~~~i 242 (489)
|+++|+|++. ++|.+...+ +++.+ .+.++.+.|++.+ ++|| .|.||++++++++.+ .+.++.+
T Consensus 69 gi~~pG~vd~---~~g~v~~~~---~l~~~~~~~~~l~~~l~~~~---~~pv---~v~NDanaaa~~e~~~~~~~~~~~~ 136 (310)
T 3htv_A 69 VMGFPALVSK---DKRTIISTP---NLPLTAADLYDLADKLENTL---NCPV---EFSRDVNLQLSWDVVENRLTQQLVL 136 (310)
T ss_dssp EEEESSCBCT---TSSCBCSCC---SSSCCHHHHTTHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHTTCTTSCEE
T ss_pred EEeccccEeC---CCCEEEeCC---CCCCccccCccHHHHHHHHh---CCCE---EEeeHHHHHHHHHHhhcccCCceEE
Confidence 9999999985 234433211 12111 1258899999988 8997 899999999987754 3567899
Q ss_pred EEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHH
Q 011283 243 AVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVR 322 (489)
Q Consensus 243 glIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R 322 (489)
++++|||+|++++.+++.+++.++.++|.|||.++.. |..| .|++. +|+|.++|+.+|.+..+
T Consensus 137 ~v~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~-g~~C--------------~cG~~--GclE~~~S~~al~~~~~ 199 (310)
T 3htv_A 137 AAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDM-TQHC--------------ACGNP--GCLETNCSGMALRRWYE 199 (310)
T ss_dssp EEEESSSEEEEEEETTEEECCSSSCCCC--------------------------------------CCSSSHHHHHHHHT
T ss_pred EEEeceeEEEEEEECCEEeecCCCCceeCcceEeCCC-CCcC--------------CCCCC--ceehhhhCHHHHHHHHH
Confidence 9999999999999999999999998999999999754 4333 36664 79999999999933211
Q ss_pred HHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCcc
Q 011283 323 RVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRL 402 (489)
Q Consensus 323 ~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l 402 (489)
+. .. .++. .++++. ..+ ++.++.++++.
T Consensus 200 -------~~--------~~------~~~~-----------------~~~~~~------~~~-----d~~~~~~~~~~--- 227 (310)
T 3htv_A 200 -------QQ--------PR------NYPL-----------------RDLFVH------AEN-----APFVQSLLENA--- 227 (310)
T ss_dssp -------TS--------CC------SSCG-----------------GGHHHH------HTT-----CHHHHHHHHHH---
T ss_pred -------hc--------cC------CCCH-----------------HHHHHH------HcC-----ChHHHHHHHHH---
Confidence 00 00 0111 112221 011 35566666654
Q ss_pred ccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhC-cccccceEEEec---cCCcchhHHHH
Q 011283 403 AGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLG-TEISKNVVIEHT---KDGSGIGAALL 478 (489)
Q Consensus 403 ~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~-~~~~~~v~i~~a---~Dgs~iGAA~~ 478 (489)
|.+|+++++.++| ..|++||++.+..+.|.+.+++.+++.+. +.....++|+.+ +|++.+|||.+
T Consensus 228 -a~~la~l~~~~dP----------~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~l 296 (310)
T 3htv_A 228 -ARAIATSINLFDP----------DAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAIL 296 (310)
T ss_dssp -HHHHHHHHHHHCC----------SEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHH
T ss_pred -HHHHHHHHHhhCC----------CEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHH
Confidence 4578899999998 36999999999988888999998887763 222346788776 79999999988
Q ss_pred hh
Q 011283 479 AS 480 (489)
Q Consensus 479 aa 480 (489)
+.
T Consensus 297 a~ 298 (310)
T 3htv_A 297 AH 298 (310)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=249.94 Aligned_cols=304 Identities=21% Similarity=0.234 Sum_probs=217.0
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeee
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIG 168 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG 168 (489)
..++|+||+|||++|++++++.|+ ++.+. +.+.| .+.+++++.|.+.+.+++.+.... ..+...+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~~~~----~~~i~gig 94 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNP-----KTYEERINLILQMCVEAAAEAVKL----NCRILGVG 94 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECC-----SSHHHHHHHHHHHHHHHHHHHHHT----TEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCC-----CCHHHHHHHHHHHHHHHHHhcccc----cCceEEEE
Confidence 468999999999999999999874 55432 23333 246788899999999988764321 13467899
Q ss_pred eEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCceEEEE
Q 011283 169 FTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DEDVMVAV 244 (489)
Q Consensus 169 ~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~~~igl 244 (489)
+++|+|++. ++|.++.-+. ..++|.+.|+.+.|++.+ ++|| .|.||+++++++|.+. +.++.+.+
T Consensus 95 i~~pG~vd~---~~g~v~~~~~--~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~v~i 163 (343)
T 2yhw_A 95 ISTGGRVNP---REGIVLHSTK--LIQEWNSVDLRTPLSDTL---HLPV---WVDNDGNCAALAERKFGQGKGLENFVTL 163 (343)
T ss_dssp EEESSEEET---TTTEEEECCT--TSSSCSSEECHHHHHHHH---CSCE---EEEEHHHHHHHHHHHTSTTTTCSCEEEE
T ss_pred EecccCEeC---CCCEEEeCCc--CCCCCcCCCHHHHHHHHH---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 999999875 3465542210 123566789999999988 8897 7999999999999874 45789999
Q ss_pred EecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHH
Q 011283 245 ILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRV 324 (489)
Q Consensus 245 IlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~ 324 (489)
++|||++++++.+++.+.+.++.++|.|||.++.+ |..| .|++. +|+|.++|+..|-+.++..
T Consensus 164 ~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~~~~~-g~~c--------------~cG~~--gclE~~~s~~al~~~~~~~ 226 (343)
T 2yhw_A 164 ITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLX-GPDC--------------SCGSH--GCIEAYASGMALQREAKKL 226 (343)
T ss_dssp EESSSEEEEEEETTEECCCTTSCTTCGGGCBCCC---CBC--------------TTSCB--SBHHHHHSHHHHHHHHHHH
T ss_pred EECCCEEEEEEECCEEecCCCCcccccCCEEEccC-CCcC--------------CCCCC--CcHHHhcCHHHHHHHHHHh
Confidence 99999999999999998988888899999999754 4333 35664 6999999999996655542
Q ss_pred HHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCcccc
Q 011283 325 LLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAG 404 (489)
Q Consensus 325 l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~a 404 (489)
.. .. +..+.. . ... .+. . .....+++. ++..++.|+.+++++++++|
T Consensus 227 ~~---~~--------~~~~~~-~-----~~~---~~~--~-~~~~~v~~~----------a~~gd~~a~~il~~~~~~La 273 (343)
T 2yhw_A 227 HD---ED--------LLLVEG-M-----SVP---KDE--A-VGALHLIQA----------AKLGNAKAQSILRTAGTALG 273 (343)
T ss_dssp HH---TT--------CSCCTT-C-----CC---------C-CCHHHHHHH----------HHTTCHHHHHHHHHHHHHHH
T ss_pred hc---cc--------cccccc-c-----ccc---ccc--c-CCHHHHHHH----------HHcCCHHHHHHHHHHHHHHH
Confidence 21 10 000000 0 000 000 0 012234433 33345899999999999999
Q ss_pred chhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec--cCCcchhHHHHhhc
Q 011283 405 AGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT--KDGSGIGAALLASA 481 (489)
Q Consensus 405 a~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a--~Dgs~iGAA~~aa~ 481 (489)
.+++++++.++| + .|+++|++. +.|.+.+++.+++...+. ...++|+.+ +|.+.+|||.++..
T Consensus 274 ~~i~~l~~~l~P--------~--~IvlgG~i~---~~~~~~l~~~l~~~~~~~-~~~~~i~~s~~~~~~~~GAa~l~~~ 338 (343)
T 2yhw_A 274 LGVVNILHTMNP--------S--LVILSGVLA---SHYIHIVKDVIRQQALSS-VQDVDVVVSDLVDPALLGAASMVLD 338 (343)
T ss_dssp HHHHHHHHHTCC--------S--EEEEESTTH---HHHHHHHHHHHHHHSCGG-GTTCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--------C--EEEEeCCcH---HHHHHHHHHHHHHhcccc-cCCcEEEEccCCCchHHHHHHHHHH
Confidence 999999999998 3 588999996 578889988888765432 335666655 57789999988753
|
| >2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-29 Score=248.98 Aligned_cols=280 Identities=18% Similarity=0.186 Sum_probs=207.5
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
++|+||+|||++|++++++.|+ ++.+. +++.+.. .+.+++++.|.+.+.+++.+ ...+|++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~-----------~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAH-----------AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGG-----------CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhh-----------CCEEEEE
Confidence 4799999999999999999774 55433 2343321 24788999998888877542 1359999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCc---eEEEEEec
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDED---VMVAVILG 247 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~---~~iglIlG 247 (489)
+|+|++. ++|.+. ++ .++++|.+.|+.+.|++.+ ++|| .|.||+++++++|.+.+.. +.+.+++|
T Consensus 63 ~pG~vd~---~~g~v~-~~--~~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaa~~e~~~g~~~~~~~v~l~~G 130 (289)
T 2aa4_A 63 STGIIRD---GSLLAL-NP--HNLGGLLHFPLVKTLEQLT---NLPT---IAINDAQAAAWAEFQALDGDITDMVFITVS 130 (289)
T ss_dssp ESSEEET---TEEECS-SG--GGGGGGTTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHTSCTTCCCEEEEEES
T ss_pred eccceeC---CCCEEE-eC--CCCCcccCCChHHHHHHHH---CCCE---EEechHHHHHHHHHHhCCCCCceEEEEEeC
Confidence 9999975 344443 22 1344567889999999988 8887 7999999999999875321 89999999
Q ss_pred CCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHH
Q 011283 248 TGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLK 327 (489)
Q Consensus 248 TG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~ 327 (489)
||++++++.+++.+++.++.++|.|||.++.. |..| .|++. +|+|.++|+..|-+.++.
T Consensus 131 tGiG~gii~~G~l~~G~~g~aGE~Gh~~~~~~-g~~c--------------~cG~~--gcle~~~s~~~l~~~~~~---- 189 (289)
T 2aa4_A 131 TGVGGGVVSGCKLLTGPGGLAGHIGHTLADPH-GPVC--------------GCGRT--GCVEAIASGRGIAAAAQG---- 189 (289)
T ss_dssp SSEEEEEEETTEEECCTTSCCCCGGGSBSCTT-SCBC--------------TTSCB--SBHHHHHSHHHHHHTCCG----
T ss_pred ccEEEEEEECCEEeeCCCCCCccCCcEEECCC-CCcC--------------CCCCc--hhHHHHhCHHHHHHHHHH----
Confidence 99999999999998998888899999999854 4333 35664 799999999888321110
Q ss_pred HhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchh
Q 011283 328 MAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGI 407 (489)
Q Consensus 328 ~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~l 407 (489)
.+ + .. ....+++. ++..+..|+.+++++++++|.++
T Consensus 190 ---~~-------~-------~~-----------------~~~~v~~~----------a~~gd~~a~~i~~~~~~~L~~~i 225 (289)
T 2aa4_A 190 ---EL-------A-------GA-----------------DAKTIFTR----------AGQGDEQAQQLIHRSARTLARLI 225 (289)
T ss_dssp ---GG-------T-------TC-----------------CHHHHHHH----------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ---hc-------c-------CC-----------------CHHHHHHH----------HHcCCHHHHHHHHHHHHHHHHHH
Confidence 00 0 00 01223332 22234889999999999999999
Q ss_pred hHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhh
Q 011283 408 VSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 408 aaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
+++++.++| + .|+++|++. ..+.|.+.+++.+++...+ ..++++.+ +|++.+|||.++.
T Consensus 226 ~~l~~~l~p--------~--~ivlgG~~~-~~~~~~~~l~~~l~~~~~~---~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 226 ADIKATTDC--------Q--CVVVGGSVG-LAEGYLALVETYLAQEPAA---FHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp HHHHHHHCC--------S--EEEEEHHHH-TSTTHHHHHHHHHTTSCGG---GCCEEEECSCSSCHHHHHHHHHHH
T ss_pred HHHHHhcCC--------C--EEEEeCccc-ccHHHHHHHHHHHHHhcCc---cCCEEEECCCCCchHHHHHHHHHh
Confidence 999999998 3 589999999 6788999999988775322 24556554 6889999998863
|
| >3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-28 Score=249.42 Aligned_cols=269 Identities=17% Similarity=0.138 Sum_probs=201.9
Q ss_pred ccccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHH---hhhhHHHhhcCccccCCCce
Q 011283 88 ERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIAT---GLAKFAEKEAGKFHLPQGRQ 164 (489)
Q Consensus 88 E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~---~i~~~~~~~~~~~~~~~~~~ 164 (489)
+.+++|+||+|||++|+++++ .|+ ++.+. .+++.+. . +.+++++.|.+ .+.+++. .+.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~--~--~~~~~l~~i~~~~~~i~~~~~----------~~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACA--D--CLDKCLGNLVEGFKAIQAGLP----------EAP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCT--T--CHHHHHHHHHHHHHHHHTTCS----------SCC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCC--C--CHHHHHHHHHHHHHHHHHHhh----------cCC
Confidence 456799999999999999999 774 55432 0233332 1 57889999988 7766643 235
Q ss_pred eeeeeEEeeeccccccccceeeeeccceeeecCC-CchHHHHHHHHHHhcCcceEeeeeecccccccccccccc------
Q 011283 165 REIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTA-GKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD------ 237 (489)
Q Consensus 165 ~~lG~tfSfP~~q~~i~~g~li~wtKgf~~~~~~-G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~------ 237 (489)
..+||++|+|++. ++|.+..- .++++|. +.|+.+.|++.+ ++|| .|.||+++++++|+|.+
T Consensus 68 ~gIGIavPG~Vd~---~~G~i~~~---~nlp~w~~~~~l~~~L~~~~---g~PV---~veNDanaaAlgE~~~G~~p~~~ 135 (366)
T 3mcp_A 68 VAISFAFPGPADY---QAGIIGDL---PNFPSFRGGVALGPFLEDIF---GIPV---FINNDGSLFAYGEALTGVLPEIN 135 (366)
T ss_dssp CEEEEECCSSEET---TTTEECCC---TTCGGGTTCBCHHHHHHHHH---CSCE---EEECHHHHHHHHHHHTSHHHHHH
T ss_pred eEEEEEecceEeC---CCCEEEeC---CCcccccCCCCHHHHHHHHH---CCCE---EEechhhHHHHHHHHhCCCcccc
Confidence 7899999999985 45666532 2566787 899999999998 8997 89999999999998755
Q ss_pred -----------CceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchh
Q 011283 238 -----------EDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQ 306 (489)
Q Consensus 238 -----------~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~ 306 (489)
.++.+++++|||+|++++.+++.+++.++.++|.|||. | . |++ .+
T Consensus 136 ~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~-~-----~----------------CG~--~G 191 (366)
T 3mcp_A 136 RRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLR-N-----K----------------KYP--EY 191 (366)
T ss_dssp HHHHHTTCCCCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSB-C-----S----------------SCT--TS
T ss_pred cccccccccCCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeeccc-C-----C----------------CCC--Cc
Confidence 57899999999999999999999999888888999998 4 1 344 37
Q ss_pred hhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccce
Q 011283 307 IYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARK 386 (489)
Q Consensus 307 ~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~ 386 (489)
|+|.++|+++|.+..+... .. ++ .++ ..++++. ++
T Consensus 192 clE~~~S~~al~~~~~~~~----~~--------~~------~~~-----------------~~~i~~~----------a~ 226 (366)
T 3mcp_A 192 IVEESVSIRAVMRVYAERS----GD--------AG------ART-----------------PKEIFEI----------AE 226 (366)
T ss_dssp BGGGTSSHHHHHHHHHHHS----SC--------CS------CCC-----------------HHHHHHH----------HH
T ss_pred ceeeeecHHHHHHHHHHhh----CC--------CC------CCC-----------------HHHHHHH----------Hh
Confidence 9999999999955444311 00 00 011 1223332 22
Q ss_pred ---eee-eehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccce
Q 011283 387 ---VVI-EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNV 462 (489)
Q Consensus 387 ---~~~-~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v 462 (489)
..+ ..|..+++++++++|.+|+++++.++| .|++||++....+.|.+.+++.+++.+.+.....+
T Consensus 227 ~~~~gD~~~a~~~l~~~~~~Lg~~i~nl~~~ldP-----------~IviGGgi~~~~~~~~~~l~~~l~~~~~~~~~~~~ 295 (366)
T 3mcp_A 227 GIRPGNREAAIAAFEELGEMAGDALASAITLIDG-----------LIVIGGGLSGASKYILPVLLKEMNAQTGMMDGARF 295 (366)
T ss_dssp TSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCS-----------EEEEESGGGGGHHHHHHHHHHHHHHHTTCC-----
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------EEEEEChhhhchHHHHHHHHHHHHHhcchhccCCc
Confidence 456 889999999999999999999999986 49999999999999999999999988776556677
Q ss_pred EEEec
Q 011283 463 VIEHT 467 (489)
Q Consensus 463 ~i~~a 467 (489)
+++.+
T Consensus 296 ~i~~s 300 (366)
T 3mcp_A 296 GRLQK 300 (366)
T ss_dssp ---CC
T ss_pred eEEEe
Confidence 77765
|
| >2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=238.35 Aligned_cols=277 Identities=18% Similarity=0.204 Sum_probs=201.2
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
.++|+||+|||++|++++++.|+ ++.+. +++.| .+.+++++.|.+.+.+ . +...+|+
T Consensus 4 m~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~-----~~~~~~~~~i~~~i~~----~---------~i~gigi 60 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTPDGK---ILDKT--SISTP-----ENLEDLLAWLDQRLSE----Q---------DYSGIAM 60 (292)
T ss_dssp CCEEEEEEETTEEEEEEECTTCC---EEEEE--EECCC-----SSHHHHHHHHHHHHTT----S---------CCSEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EEeCC-----CCHHHHHHHHHHHHHh----C---------CCcEEEE
Confidence 35899999999999999999874 55432 33433 2466777777666544 1 2467999
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccccc--ccCceEEEEEec
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARY--WDEDVMVAVILG 247 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~--~~~~~~iglIlG 247 (489)
++|+|++. .+|.+... .+++.|.+.++.+.| +.+ ++|| .|.||+++++++|.+ ++.++.+.+++|
T Consensus 61 ~~pG~vd~---~~g~v~~~---~~~~~~~~~~l~~~l-~~~---~~pv---~v~NDa~aaa~~e~~~~~~~~~~v~l~~G 127 (292)
T 2gup_A 61 SVPGAVNQ---ETGVIDGF---SAVPYIHGFSWYEAL-SSY---QLPV---HLENDANCVGLSELLAHPELENAACVVIG 127 (292)
T ss_dssp EESSEECT---TTCBEESC---CSSGGGSSSBHHHHT-GGG---CCCE---EEEEHHHHHHHHHHHHCTTCSSEEEEEES
T ss_pred EecCcccC---CCCEEEec---CCCCcccCCCHHHHH-HHc---CCCE---EEechHHHHHHHHHHhcCCCCeEEEEEEC
Confidence 99999985 34555421 133456678999988 766 8887 799999999999976 466789999999
Q ss_pred CCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHH
Q 011283 248 TGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLK 327 (489)
Q Consensus 248 TG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~ 327 (489)
||++++++.+++.+++.++.++|.|||.++. | .| + .+|+|.++|+..|-+.++...
T Consensus 128 tGiG~giv~~G~l~~G~~g~aGEiGh~~~~~-----~--------------~~-~--~gcle~~~s~~~l~~~~~~~~-- 183 (292)
T 2gup_A 128 TGIGGAMIINGRLHRGRHGLGGEFGYMTTLA-----P--------------AE-K--LNNWSQLASTGNMVRYVIEKS-- 183 (292)
T ss_dssp SSEEEEEEETTEEECCTTSCTTCGGGCBSSC-----C--------------SS-S--CCBHHHHHSHHHHHHHHHHHH--
T ss_pred CceEEEEEECCEEEecCCCCCccceeEEecc-----C--------------CC-C--CCcHHHhcCHHHHHHHHHHhh--
Confidence 9999999999998888888888888888763 1 01 2 479999999999954433211
Q ss_pred HhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchh
Q 011283 328 MAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGI 407 (489)
Q Consensus 328 ~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~l 407 (489)
+ . + .++ ...+++. ++..+..|..+++++++++|.++
T Consensus 184 ----~-----~--~------~~~-----------------~~~v~~~----------a~~gd~~a~~i~~~~~~~L~~~i 219 (292)
T 2gup_A 184 ----G-----H--T------DWD-----------------GRKIYQE----------AAAGNILCQEAIERMNRNLAQGL 219 (292)
T ss_dssp ----S-----S--C------CCC-----------------HHHHHHH----------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ----C-----C--C------CCC-----------------HHHHHHH----------HHcCCHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 000 1123332 22234889999999999999999
Q ss_pred hHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccc--cceEEEec---cCCcchhHHHHhhc
Q 011283 408 VSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEIS--KNVVIEHT---KDGSGIGAALLASA 481 (489)
Q Consensus 408 aaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~--~~v~i~~a---~Dgs~iGAA~~aa~ 481 (489)
+++++.++| + .|+++|++.. .+.|.+.+++.+++...+... ..++|+.+ +|++.+|||.++..
T Consensus 220 ~~l~~~l~p--------~--~IvlgG~i~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 220 LNIQYLIDP--------G--VISLGGSISQ-NPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp HHHHHHHCC--------S--EEEEESGGGG-CHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred HHHHHHhCC--------C--EEEEeCcccc-chHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 999999998 3 5899999964 789999999999876532211 23556544 78899999988764
|
| >1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.6e-27 Score=236.74 Aligned_cols=290 Identities=13% Similarity=0.132 Sum_probs=187.1
Q ss_pred cccEEEEecCCcceEEEEEEe-CCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 89 RGLFYALDLGGTNFRVLRVQL-GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l-~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
.+++|+||+||||+|++++++ .+. +... .++|+.. .+.+. +.+.+++++.+ .....+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~---i~~~----~~~~~~~----~~~~~----~~i~~~~~~~~-------~~i~gi 70 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGE---ISQA----KTYSGLD----YPSLE----AVIRVYLEEHK-------VEVKDG 70 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCC---EEEE----EEEEGGG----CSCHH----HHHHHHHHHSC-------CCCCEE
T ss_pred CCEEEEEEechhheEEEEEECCCCc---EEEE----EEecCCC----cCCHH----HHHHHHHHhcC-------CCccEE
Confidence 467999999999999999997 453 4432 2334321 12233 33444544332 235789
Q ss_pred eeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcc-eEeeeeeccccccccccccc----------
Q 011283 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLD-MRVSALVNDTVGTLAGARYW---------- 236 (489)
Q Consensus 168 G~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~-v~v~ai~NDtvatlla~~~~---------- 236 (489)
|+++|+|++...+ ....+.| . .+ .+.|++.| ++| | .|+||+++++++|.+.
T Consensus 71 gi~~pG~vd~~~~-~~~nl~w---------~-~~-~~~l~~~~---~~p~V---~v~NDanaaalgE~~~~~~~~~~~g~ 132 (332)
T 1sz2_A 71 CIAIACPITGDWV-AMTNHTW---------A-FS-IAEMKKNL---GFSHL---EIINDFTAVSMAIPMLKKEHLIQFGG 132 (332)
T ss_dssp EEEESSCCCSSEE-CCSSSCC---------C-EE-HHHHHHHH---TCSEE---EEEEHHHHHHHHGGGCCGGGEEECSS
T ss_pred EEEEeCceeCCEE-eeeCCCC---------c-CC-HHHHHHHh---CCCcE---EEEeCHhHHhccccccChhhheecCC
Confidence 9999999973111 1111233 3 46 57888887 887 7 7999999999999863
Q ss_pred ----cCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCccccccccc-ccccCCcchhhhhhh
Q 011283 237 ----DEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDM-DAASINPGEQIYEKT 311 (489)
Q Consensus 237 ----~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~-D~~s~~pg~~~~Ek~ 311 (489)
+.++.+.+++|||++++++.+++ .++++.++|.|||.++.. |.. +..+ ..-|.+.|.+|+|.+
T Consensus 133 g~~~~~~~~~~v~~GTGiG~giv~~g~--~G~~g~agE~GH~~v~~~-~~~---------~~~l~~~~c~~~g~gclE~~ 200 (332)
T 1sz2_A 133 AEPVEGKPIAVYGAGTGLGVAHLVHVD--KRWVSLPGEGGHVDFAPN-SEE---------EAIILEILRAEIGHVSAERV 200 (332)
T ss_dssp CCCCTTCCEEEEEESSSEEEEEEEEET--TEEEEEECCGGGSBCCCC-SHH---------HHHHHHHHHHHSSSCBGGGT
T ss_pred CCCCCCCcEEEEEcCccceEEEEecCC--CCeeeCCCCccccCcCCC-ChH---------HHHHHHHHHhccCCcchhhh
Confidence 45789999999999999999987 677777788888887643 210 0000 000112234799999
Q ss_pred hchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceee-ee
Q 011283 312 ISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVV-IE 390 (489)
Q Consensus 312 ~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~-~~ 390 (489)
+||+.|.++.+..... .. .. +..+ ...++++. ++.. ++
T Consensus 201 ~S~~~l~~~~~~~~~~---~~--------~~---~~~~-----------------~~~~i~~~----------a~~G~D~ 239 (332)
T 1sz2_A 201 LSGPGLVNLYRAIVKA---DN--------RL---PENL-----------------KPKDITER----------ALADSCT 239 (332)
T ss_dssp SSHHHHHHHHHHHHHH---TT--------CC---CCCC-----------------CHHHHHHH----------HHHTCCH
T ss_pred ccHHHHHHHHHHHhhc---cC--------CC---ccCC-----------------CHHHHHHH----------HHcCCCH
Confidence 9999997665542211 00 00 0000 12233333 2234 48
Q ss_pred ehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccc-hhHHH-HHHHHHHHH--hhCcc-cccceEEE
Q 011283 391 VCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEH-YTQYR-RYVHEAVTE--LLGTE-ISKNVVIE 465 (489)
Q Consensus 391 ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~-~~~f~-~~i~~~l~~--~~~~~-~~~~v~i~ 465 (489)
.|+.+++++++++|.+++++++.++| + ..|+++||+... .+.|. +.+++.+++ .+... ....+.+.
T Consensus 240 ~A~~~~~~~~~~Lg~~i~~l~~~l~P--------~-~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 310 (332)
T 1sz2_A 240 DCRRALSLFCVIMGRFGGNLALNLGT--------F-GGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLI 310 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC--------T-TEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC--------C-eEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEE
Confidence 99999999999999999999999998 2 128899999986 45554 357777753 11110 01234444
Q ss_pred eccCCcchhHHHHhh
Q 011283 466 HTKDGSGIGAALLAS 480 (489)
Q Consensus 466 ~a~Dgs~iGAA~~aa 480 (489)
..+|++++|||.++.
T Consensus 311 ~~~~a~l~GAa~l~~ 325 (332)
T 1sz2_A 311 VHDNPGLLGSGAHLR 325 (332)
T ss_dssp CCSCHHHHHHHHHHH
T ss_pred ECCchhHHHHHHHHH
Confidence 457999999998865
|
| >2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-26 Score=236.31 Aligned_cols=294 Identities=14% Similarity=0.030 Sum_probs=199.2
Q ss_pred cccEEEEecCCcceEEEEEEe----CCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCce
Q 011283 89 RGLFYALDLGGTNFRVLRVQL----GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQ 164 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l----~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~ 164 (489)
..++|+||+|||++|++++++ .|+ ++.+. + ..|. .+.+++++.|.+.+.++..... ...
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~---il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~~-------~~i 90 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVH---ACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASVM-------KRV 90 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEE---EEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHHH-------TTE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCcc---EEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhccc-------ccc
Confidence 347899999999999999998 663 55432 1 1232 2467888988888887654321 246
Q ss_pred eeeeeEEeeeccccccccceeeeeccceeeecCCCc-hHHHHHHHHHHhcCc-ceEeeeeeccccccccc----------
Q 011283 165 REIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGK-DVVACLNEAMERQGL-DMRVSALVNDTVGTLAG---------- 232 (489)
Q Consensus 165 ~~lG~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~-dv~~lL~~al~~~~l-~v~v~ai~NDtvatlla---------- 232 (489)
..+||++|+|++. |.+. .. .++|.+. ++.+++++.+ ++ || .|+||+++++++
T Consensus 91 ~gigi~~pG~vd~-----g~v~-~~----~~~~~~~~~l~~~l~~~~---~~~pv---~v~NDa~aaalge~~l~~~~~~ 154 (373)
T 2q2r_A 91 KAGVINVPGPVTG-----GAVG-GP----FNNLKGIARLSDYPKALF---PPGHS---AILNDLEAGGFGVLAVSDAHVF 154 (373)
T ss_dssp EEEEEEESSCEET-----TTEE-CC----CSSSBSCEEGGGSCTTTS---CTTSE---EEEEHHHHHHHHHHHHHHTTCH
T ss_pred cEEEEEeeccccC-----CEEe-cc----CCCCCCcCCHHHHHHHhc---CCCCE---EEEccHhHHhccccccChhhhc
Confidence 7899999999885 3333 11 2234453 8887776655 67 77 799999999999
Q ss_pred -----cccc----------------cCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccc-cCCCccc
Q 011283 233 -----ARYW----------------DEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAF-SKGLPLT 290 (489)
Q Consensus 233 -----~~~~----------------~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f-~~~lp~t 290 (489)
|.|. +.++.+.+++|||+|++++.+++.+.++++.++|.|||.++.. |.+ |+.
T Consensus 155 ~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l~~G~~~~aGE~Gh~~~~~~-~~c~cg~---- 229 (373)
T 2q2r_A 155 SEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPPMNQHIVVPLELGSQTLPMR-KDIDYIQ---- 229 (373)
T ss_dssp HHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC---CEEEEEECGGGSBCCCS-SCHHHHH----
T ss_pred cccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcccCCCcccccccceeecCCC-CCcchhH----
Confidence 5654 3478999999999999999999988887777778888888743 322 110
Q ss_pred ccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhh
Q 011283 291 EFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGS 370 (489)
Q Consensus 291 ~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~ 370 (489)
.+-..+. ..+|+|.++||.+|.++.+... . + . ++ ..+ ...
T Consensus 230 ----~l~~~~~--~~g~lE~~~S~~~l~~~~~~~~----~-~-----~-~~------~~~-----------------~~~ 269 (373)
T 2q2r_A 230 ----TLHAELK--LFPNYENMVSGAGLEFHYRQVV----R-G-----S-RP------PCS-----------------AGE 269 (373)
T ss_dssp ----HHHHHHT--SCCBHHHHSSHHHHHHHHHHHH----T-T-----S-SC------CCC-----------------HHH
T ss_pred ----HHHHHhh--ccccHhHhcCHHHHHHHHHHHh----c-C-----C-CC------CCC-----------------HHH
Confidence 0000001 1479999999999966554311 0 1 0 00 000 122
Q ss_pred hhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHH--HHHH
Q 011283 371 TLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRR--YVHE 448 (489)
Q Consensus 371 il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~--~i~~ 448 (489)
+++. ++..+..|+.+++++++++|.+++++++.++| + .|+++||.+...+.|.+ .+++
T Consensus 270 i~~~----------a~~gD~~a~~~l~~~~~~L~~~i~~l~~~l~p--------~--~IvlgGG~~~~~~~~~~~~~i~~ 329 (373)
T 2q2r_A 270 IAKL----------ASEGDANACKAMKKYHEYLMRVGSEASMALLP--------L--TIVLVGDNIVNNAFFYRNPQNLK 329 (373)
T ss_dssp HHHH----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEECSHHHHHTHHHHHSHHHHH
T ss_pred HHHH----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEeCChHhCchhhhcchhHHH
Confidence 3332 22234889999999999999999999999998 3 48898884444488888 8888
Q ss_pred HHHHhhCccc------ccceEEEec---cCCcchhHHHHhh
Q 011283 449 AVTELLGTEI------SKNVVIEHT---KDGSGIGAALLAS 480 (489)
Q Consensus 449 ~l~~~~~~~~------~~~v~i~~a---~Dgs~iGAA~~aa 480 (489)
.+++.+.+.. ...+.++.+ +|++++|||.++.
T Consensus 330 ~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~ 370 (373)
T 2q2r_A 330 EMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGL 370 (373)
T ss_dssp HHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHH
Confidence 8887654321 134555543 7899999998864
|
| >1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-24 Score=211.38 Aligned_cols=247 Identities=18% Similarity=0.250 Sum_probs=173.6
Q ss_pred CCccccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCcee
Q 011283 86 GNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165 (489)
Q Consensus 86 G~E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~ 165 (489)
..+..++|+||+|||++|++++++.+. .++... .+++.|.. .+.+++++.|.+.+++++.+.... ....
T Consensus 8 ~~~~~~~lgidiggt~i~~~l~dl~~g--~i~~~~-~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~ 76 (267)
T 1woq_A 8 SHKNAPLIGIDIGGTGIKGGIVDLKKG--KLLGER-FRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAGS 76 (267)
T ss_dssp ---CCCEEEEEECSSEEEEEEEETTTT--EEEEEE-EEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTTC
T ss_pred cCCCCEEEEEEECCCEEEEEEEECCCC--eEEEEE-EecCCCcc---CCHHHHHHHHHHHHHHHHHhcccc-----Cccc
Confidence 344567899999999999999998632 344221 12333321 246789999999999987643210 1234
Q ss_pred eeeeEEeeeccccccccceeeeeccceeee-cCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc----cCc-
Q 011283 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVS-GTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW----DED- 239 (489)
Q Consensus 166 ~lG~tfSfP~~q~~i~~g~li~wtKgf~~~-~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~----~~~- 239 (489)
.+|+++|+|++ +|.+. ++ .+++ +|.+.|+.+.|++.+ ++|| .|.||+++++++|.+. +.+
T Consensus 77 ~igi~~pG~v~-----~g~v~-~~--~~l~~~w~~~~l~~~l~~~~---~~pV---~v~NDanaaalaE~~~g~~~~~~~ 142 (267)
T 1woq_A 77 PVGVTFPGIIQ-----HGVVH-SA--ANVDKSWLNTDIDALLTARL---GRPV---EVINDADAAGLAEARYGAGAGVKG 142 (267)
T ss_dssp CEEEEESSCEE-----TTEEC-CC--TTSCGGGTTCBHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHSTTTTCCS
T ss_pred eEEEEccceEc-----CCEEE-eC--CCCCCCCCCCCHHHHHHHHH---CCCE---EEeehhHHHHHHHHHhCCCCCCCC
Confidence 69999999986 35543 22 1333 567889999999998 8997 7999999999999874 334
Q ss_pred eEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHH
Q 011283 240 VMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGE 319 (489)
Q Consensus 240 ~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLge 319 (489)
+.+.+++|||++++++.+++.+++ +|.|||.++ + .|+|.++|+.+|.
T Consensus 143 ~~~~l~~GtGIG~giv~~G~l~~G-----gEiGh~~v~-------------------------~--~~lE~~~S~~~l~- 189 (267)
T 1woq_A 143 TVLVITLGTGIGSAFIFDGKLVPN-----AELGHLEID-------------------------G--HDAETKASAVARE- 189 (267)
T ss_dssp EEEEEEESSSEEEEEEETTEEETT-----CCGGGCEET-------------------------T--EEHHHHHSHHHHH-
T ss_pred cEEEEEECcceEEEEEECCEEccC-----ceeeeEEec-------------------------C--ccHHHHhCHHHHh-
Confidence 578999999999999999876543 244444432 1 2699999998762
Q ss_pred HHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcC
Q 011283 320 IVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRG 399 (489)
Q Consensus 320 i~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~Ra 399 (489)
+ .. ..++++
T Consensus 190 --~--------~~-------------------------------------------------------------~~~~~~ 198 (267)
T 1woq_A 190 --R--------DG-------------------------------------------------------------LSWDEY 198 (267)
T ss_dssp --H--------TT-------------------------------------------------------------CCHHHH
T ss_pred --h--------cc-------------------------------------------------------------hhHHHH
Confidence 1 00 012345
Q ss_pred CccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHH
Q 011283 400 GRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAA 476 (489)
Q Consensus 400 A~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA 476 (489)
++++|.+++++++.++| + .|+++|++....+.|.+.++ ..++++.+ +|++.+|||
T Consensus 199 ~~~l~~~l~~l~~~ldP--------~--~IvlgG~i~~~~~~~~~~~~------------~~~~i~~s~l~~~a~~~GAa 256 (267)
T 1woq_A 199 SVLLQRYFSHVEFLFSP--------E--LFIVGGGISKRADEYLPNLR------------LRTPIVPAVLRNEAGIVGAA 256 (267)
T ss_dssp HHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGGGGTGGGCC------------CSSCEEECSCSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------C--EEEEeChhhcccHHHHHhhc------------cCceEEECCcCCcHHHHHHH
Confidence 56788899999999998 3 59999999998887776553 13455544 788999999
Q ss_pred HHhhccc
Q 011283 477 LLASANS 483 (489)
Q Consensus 477 ~~aa~~~ 483 (489)
.++....
T Consensus 257 ~l~~~~~ 263 (267)
T 1woq_A 257 IEIALQH 263 (267)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 9876543
|
| >2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-23 Score=208.22 Aligned_cols=280 Identities=16% Similarity=0.136 Sum_probs=184.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
++|+||+|||++|++++++.|+ ++.+. +++.|... ..+.+++++.|.+.+.+++.+. ...+|++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~~~~~~-~~~~~~~~~~i~~~i~~~~~~~----------~~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGEG--SSGPGNYH-NVGLTRAIENIKEAVKIAAKGE----------ADVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEEE--EESCCCHH-HHCHHHHHHHHHHHHHHHHTSC----------CSEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEEE--eCCCCCcc-cCCHHHHHHHHHHHHHHHHhcC----------CCEEEEE
Confidence 5899999999999999999874 55432 23433211 1247889999999998886531 3568888
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCCc
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGT 250 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG~ 250 (489)
+|+| +. .++. .++.+.|++ + ++|| .|.||++++++++.+ .++.+.+++|||+
T Consensus 67 ~~G~-~~---~~~~---------------~~l~~~l~~-~---~~pv---~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 67 VAGL-DS---KFDW---------------ENFTPLASL-I---APKV---IIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp ETTC-CS---HHHH---------------HHHHHHHTT-S---SSEE---EEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred cCCC-Cc---hhHH---------------HHHHHHHHh-C---CCCE---EEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 8888 64 1222 267777766 5 6776 799999999999976 5789999999994
Q ss_pred ceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcch----hhhhhhhchhhHHHHHHHHHH
Q 011283 251 NACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGE----QIYEKTISGMYLGEIVRRVLL 326 (489)
Q Consensus 251 Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~----~~~Ek~~SG~yLgei~R~~l~ 326 (489)
+.+++ +.+.++.++|.|||.++ + |.-| .|++.|. .|+|.++|+..|.+.++..+
T Consensus 119 ----i~~g~-~~G~~~~aGE~Gh~~~~-~-g~~c--------------~cG~~gl~~~~~~le~~~s~~~l~~~~~~~~- 176 (299)
T 2e2o_A 119 ----VVEGY-NGKEFLRVGGRGWLLSD-D-GSAY--------------WVGRKALRKVLKMMDGLENKTILYNKVLKTI- 176 (299)
T ss_dssp ----EEEEE-CSSCEEEEECSCTTTCC-T-TSHH--------------HHHHHHHHHHHHHHTTSSCCCHHHHHHHHHT-
T ss_pred ----EEEEE-cCCeEEecCCcCCCcCC-C-ccHH--------------HHHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-
Confidence 33444 45555556677787776 2 3221 2344211 19999999999965544311
Q ss_pred HHhhhccccCCCccccccccccccCcccccccccCchhH-hhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccc
Q 011283 327 KMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDL-QAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGA 405 (489)
Q Consensus 327 ~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~-~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa 405 (489)
. ...+..+.. .+..- .....+. .....+++. ++..++.|+.+++++++++|.
T Consensus 177 ---~------~~~~~~l~~-------~~~~~-~~~~~~~~~~~~~v~~~----------a~~gd~~a~~il~~~~~~La~ 229 (299)
T 2e2o_A 177 ---N------VKDLDELVM-------WSYTS-SCQIDLVASIAKAVDEA----------ANEGDTVAMDILKQGAELLAS 229 (299)
T ss_dssp ---T------CCSHHHHHH-------HHHHH-TTCHHHHHTTHHHHHHH----------HHTTCHHHHHHHHHHHHHHHH
T ss_pred ---C------CCCHHHHHH-------HHHcC-CCCHHHHHHHHHHHHHH----------HhcCCHHHHHHHHHHHHHHHH
Confidence 0 000000000 00000 0000000 012233332 333458999999999999999
Q ss_pred hhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhc
Q 011283 406 GIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASA 481 (489)
Q Consensus 406 ~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~ 481 (489)
+++++++.++| + .|+++||+... +.|.+.+++.+++. .+..-..++++.+|||.++..
T Consensus 230 ~i~~l~~~l~p--------~--~IvlgGgv~~~-~~~~~~l~~~~~~~-------~i~~~~~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 230 QAVYLARKIGT--------N--KVYLKGGMFRS-NIYHKFFTLYLEKE-------GIISDLGKRSPEIGAVILAYK 287 (299)
T ss_dssp HHHHHHHHHTC--------S--EEEEESGGGGS-HHHHHHHHHHHHHT-------TCEEECCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--------C--EEEEECCccCc-HHHHHHHHHHCCCC-------eEeccCCCCChHHHHHHHHHH
Confidence 99999999998 3 59999999998 99999999888764 222211348899999988753
|
| >2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=204.44 Aligned_cols=299 Identities=15% Similarity=0.149 Sum_probs=186.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCC-ceeeeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQG-RQREIGF 169 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~-~~~~lG~ 169 (489)
++|+||+|||++|++++++.|+ ++.+. +.+ +......+.+++++.|++.|.+++++.+.. .. +...+|+
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~----~~~~i~gigi 76 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAEA--DGL-STNHWLIGTDKCVERINEMVNRAKRKAGVD----PLVPLRSLGL 76 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEEE--EEC-CCCHHHHCHHHHHHHHHHHHHHHHHHHTCC----TTCCBSEEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEEE--eCC-CCCcccCCHHHHHHHHHHHHHHHHHhcCCC----cccceeEEEE
Confidence 6899999999999999999874 55432 121 222111257889999999999998876532 12 4678999
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecCC
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTG 249 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGTG 249 (489)
++|+|++.. . +.++.+.|++.+...++|| .|.||+++++++ .| .++.+.+++|||
T Consensus 77 ~~pG~vd~~--------~-----------~~~l~~~l~~~~~~~~~pv---~v~NDa~aaa~a-~~--~~~~v~v~~GTG 131 (347)
T 2ch5_A 77 SLSGGDQED--------A-----------GRILIEELRDRFPYLSESY---LITTDAAGSIAT-AT--PDGGVVLISGTG 131 (347)
T ss_dssp EETTTTCHH--------H-----------HHHHHHHHHHHCTTSBSCE---EEEEHHHHHHHH-HC--SSCEEEEEESSS
T ss_pred eccCCCchH--------H-----------HHHHHHHHHHhcCCCCceE---EEECcHHHHHHh-hC--CCCcEEEEEcCC
Confidence 999998752 1 2477788877662112676 799999999999 44 367899999999
Q ss_pred cceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhh-hhchhhHHHHHHHHHHHH
Q 011283 250 TNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEK-TISGMYLGEIVRRVLLKM 328 (489)
Q Consensus 250 ~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek-~~SG~yLgei~R~~l~~~ 328 (489)
+|++++.. .|..+ .|++ .+|+|. ..||.|+++.........
T Consensus 132 ig~~~v~~-------------~G~~c-----------------------~cG~--~G~l~~de~s~~~i~~~~~~~~~~~ 173 (347)
T 2ch5_A 132 SNCRLINP-------------DGSES-----------------------GCGG--WGHMMGDEGSAYWIAHQAVKIVFDS 173 (347)
T ss_dssp EEEEEECT-------------TSCEE-----------------------EEEC--CCTTTCCTTSHHHHHHHHHHHHHHH
T ss_pred ceeEEEcC-------------CCCEE-----------------------ecCC--cCcccCCCccHHHHHHHHHHHHHHH
Confidence 99976542 12221 1333 357777 788888875444322111
Q ss_pred hhhccccCCCcccc---------ccccccccC--cccccccccC-chhHh-hhhhhhhhhcccccccccceeeeeehhhh
Q 011283 329 AEEGALFGNSVPEK---------LSMPFVLRT--PHICAMQQDY-SEDLQ-AVGSTLYDVAGVESSLKARKVVIEVCDTI 395 (489)
Q Consensus 329 ~~~~~lf~~~~~~~---------l~~~~~~~t--~~l~~i~~d~-~~~~~-~~~~il~~~~~~~~~~~d~~~~~~ia~~V 395 (489)
.. + ..+.. +...+.+++ ..+..+..+. ..+.. ....+++. ++..+..|+.+
T Consensus 174 ~d-g-----~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----------a~~gD~~a~~i 237 (347)
T 2ch5_A 174 ID-N-----LEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEG----------AQQGDPLSRYI 237 (347)
T ss_dssp HH-T-----SSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHH----------HHTTCHHHHHH
T ss_pred Hh-C-----CCCCCCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHHHH----------HHcCCHHHHHH
Confidence 11 1 00100 000000000 0000000000 00110 12334433 23345899999
Q ss_pred hhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhC-cccccceEEEe--ccCCcc
Q 011283 396 VKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLG-TEISKNVVIEH--TKDGSG 472 (489)
Q Consensus 396 ~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~-~~~~~~v~i~~--a~Dgs~ 472 (489)
++++++++|.+++++++.++|.... ......|+++||+++..+.|.+.+++.+++... +.....+.++. ..+++.
T Consensus 238 l~~~~~~La~~i~~l~~~~~p~~~~--~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~~ 315 (347)
T 2ch5_A 238 FRKAGEMLGRHIVAVLPEIDPVLFQ--GKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSA 315 (347)
T ss_dssp HHHHHHHHHHHHHHHGGGSCGGGGC--STTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCTH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccc--cCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCChH
Confidence 9999999999999999999983000 001136999999999999999999999987642 11122234433 356999
Q ss_pred hhHHHHhh
Q 011283 473 IGAALLAS 480 (489)
Q Consensus 473 iGAA~~aa 480 (489)
+|||.++.
T Consensus 316 ~GAa~la~ 323 (347)
T 2ch5_A 316 LGGASLGA 323 (347)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
|
| >1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-22 Score=209.03 Aligned_cols=289 Identities=10% Similarity=0.088 Sum_probs=196.7
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHH---HHhhhhHHHhhcCccccCCCceeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFI---ATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~I---a~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
++|+||+|||++|++++++. +++.+. +++.+.... .+.+++++.+ .+.|.+++++.+... .+...+
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~~----~~i~gI 71 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKMQ--NFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYSL----SSFSAF 71 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEEE--EEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCCG----GGCSEE
T ss_pred eEEEEECCccceeEEEEecc----hheeee--ecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCCc----cCceEE
Confidence 58999999999999999963 254432 233332100 0233455556 777888876554211 245677
Q ss_pred eeEEeeeccccccccceee----------------eeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccc----
Q 011283 168 GFTFSFPVKQTSIDSGVLI----------------KWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTV---- 227 (489)
Q Consensus 168 G~tfSfP~~q~~i~~g~li----------------~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtv---- 227 (489)
+++|+|++. .+|.+. .+.- + . +.++.+.|++.+ ++|| .|.||++
T Consensus 72 -i~~pG~vd~---~~G~~~~i~~~~~~~l~~~~~~~~~~--n---l-~~~l~~~l~~~~---~~Pv---~v~NDan~~~~ 135 (381)
T 1saz_A 72 -VSRGGLLDP---IPGGVYLVDGLMIKTLKSGKNGEHAS--N---L-GAIIAHRFSSET---GVPA---YVVDPVVVDEM 135 (381)
T ss_dssp -EEECCSCSC---BCSSEEECCHHHHHHHHHTTTCCCTT--H---H-HHHHHHHHHHHH---CCCE---EEESCTTBCCC
T ss_pred -EecCCCCCC---CCCceEecCHHHHHHHHhcccccChh--h---h-hHHHHHHHHHhc---CCCE---EEeCCCccccC
Confidence 899999875 345441 1211 1 1 457777788777 8997 7999999
Q ss_pred -----cccc-----------------cc-ccc----cCc--eEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeec
Q 011283 228 -----GTLA-----------------GA-RYW----DED--VMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINT 278 (489)
Q Consensus 228 -----atll-----------------a~-~~~----~~~--~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~ 278 (489)
++++ +| ++. +.+ +.+.+++|||+++|++.+++.+.+..+.++| |||.++.
T Consensus 136 ~~~a~aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agE-Gh~~~~~ 214 (381)
T 1saz_A 136 EDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGD-GPFTPER 214 (381)
T ss_dssp CGGGTBCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTC-SSCCSSC
T ss_pred cHHHHHcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCC-cceeecc
Confidence 9999 88 553 345 9999999999999999999998888887788 9998864
Q ss_pred ccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCccccccc
Q 011283 279 EWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQ 358 (489)
Q Consensus 279 E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~ 358 (489)
. |. | .|++.-.+|+|.++|+..|-+.++. ...++ ..+.
T Consensus 215 ~-g~-c--------------~cg~l~~gc~e~~~S~~~l~~~~~~-------~~g~~------------~~~~------- 252 (381)
T 1saz_A 215 S-GT-L--------------PLTQLVDLCFSGKFTYEEMKKRIVG-------NGGLV------------AYLG------- 252 (381)
T ss_dssp C-CS-C--------------CHHHHHHHHTSSCCCTTGGGSTTTT-------SCTHH------------HHHS-------
T ss_pred C-CC-C--------------CCcHHHHHHHHhCCCHHHHHHHHHh-------ccCcc------------cccc-------
Confidence 3 43 2 2333114799999999998332210 00000 0000
Q ss_pred ccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchhhHHHHhh--hccCCcccccceeEEEecCccc
Q 011283 359 QDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKI--DEDSNGAIFGKRTVVAMDGGLY 436 (489)
Q Consensus 359 ~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~laaii~~~--~~~~~~~~~~~~~~I~i~Gsv~ 436 (489)
.. ...++++. ++..+..|+.+++++++++|.+|++++..+ +| ..|+++||+.
T Consensus 253 ---~~---~~~~i~~~----------a~~gd~~a~~~l~~~~~~la~~i~~l~~~l~~~p----------~~IvlgGgi~ 306 (381)
T 1saz_A 253 ---TS---DAREVVRR----------IKQGDEWAKRVYRAMAYQIAKWIGKMAAVLKGEV----------DFIVLTGGLA 306 (381)
T ss_dssp ---CC---CHHHHHHH----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCC----------SEEEEEEGGG
T ss_pred ---CC---CHHHHHHH----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----------CEEEEeCcCc
Confidence 00 11223332 222347899999999999999999999999 77 3699999999
Q ss_pred cchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhHHHHhhc
Q 011283 437 EHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGAALLASA 481 (489)
Q Consensus 437 ~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGAA~~aa~ 481 (489)
+..+.|.+.+++.++... .+.++.+ +|++.+|||.++.-
T Consensus 307 ~~~~~l~~~i~~~l~~~~------~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 307 HEKEFLVPWITKRVSFIA------PVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp GCTTTHHHHHHHHHTTTS------CEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred cChHHHHHHHHHHHHhhc------CeEEEecCcchhHHHHHHHHHHcC
Confidence 998879999998887642 3566666 35789999988754
|
| >3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-22 Score=191.05 Aligned_cols=204 Identities=18% Similarity=0.187 Sum_probs=144.7
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeee
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIG 168 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG 168 (489)
.+++|+||+|||++| +++..|+ +.. +.+.|.. .+.+++.+.|.+.++++ +...+|
T Consensus 5 ~~~~lgiDIGGT~i~--~~d~~g~---~~~----~~~t~~~---~~~~~~~~~i~~~i~~~-------------~i~gig 59 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVK--IGLSTDG---EER----KVESGKT---MTGPEMVAAVTAMAKDM-------------TYDVIA 59 (226)
T ss_dssp GCCEEEEEECSSEEE--EEETTTC---CEE----EEECCTT---CCHHHHHHHHHHHTTTC-------------CCSEEE
T ss_pred CCEEEEEEECCCEEE--EEECCCC---EEE----EEECCCC---CCHHHHHHHHHHHHHhC-------------CCCEEE
Confidence 467999999999999 4666653 321 2343432 34677777776655432 246799
Q ss_pred eEEeeeccccccccceeeeeccceee-ecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEec
Q 011283 169 FTFSFPVKQTSIDSGVLIKWTKGFSV-SGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILG 247 (489)
Q Consensus 169 ~tfSfP~~q~~i~~g~li~wtKgf~~-~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlG 247 (489)
+++|+|++.. +.+. + ..++ ++|.+.|+. +.+ ++|| .|.||+++++++|.+. .+.+.+++|
T Consensus 60 i~~pG~Vd~~----~~~~-~--~~nl~~~w~~~~l~----~~~---~~pv---~v~NDanaaalge~~~--~~~~~l~~G 120 (226)
T 3lm2_A 60 MGYPGPVVHN----KPLR-E--PVNLGEGWVGYDYE----GAF---GRPV---RIVNDALMQAIGSYNG--GRMLFLGLG 120 (226)
T ss_dssp EEESSCEETT----EECS-C--CTTSCSCCTTCCHH----HHH---TSCE---EEEEHHHHHHHHHCCS--SEEEEEEES
T ss_pred EEEEeEEECC----eEEE-E--CCcCCccccCCchH----Hhc---CCeE---EEEEHHHHHHHHHhhc--CcEEEEEeC
Confidence 9999999852 2222 1 1233 356677774 345 8897 7999999999999876 689999999
Q ss_pred CCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHHHHHHHHHHH
Q 011283 248 TGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLK 327 (489)
Q Consensus 248 TG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLgei~R~~l~~ 327 (489)
||++++++.+++.++ +|.|||.++. .+|+|.|+|+.+| .|..
T Consensus 121 tGiG~gii~~G~l~~------GEiGH~~v~~--------------------------~gclE~~~s~~al---~~~~--- 162 (226)
T 3lm2_A 121 TGLGAAMIVENVAQP------MEIAHLPYRK--------------------------GKTYEHYVSEAYR---EKKG--- 162 (226)
T ss_dssp SSEEEEEEETTEEEE------ECCTTSEEET--------------------------TEEHHHHTCHHHH---HHHC---
T ss_pred CceEEEEEECCEEee------eeeeeEEecC--------------------------CCcHHHHhCHHHH---HHHH---
Confidence 999999999877543 3555555531 1699999999998 2210
Q ss_pred HhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCccccchh
Q 011283 328 MAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGI 407 (489)
Q Consensus 328 ~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa~l 407 (489)
+ +++++++|.+|
T Consensus 163 --------------------------------------------------------~------------~~~~~~L~~~l 174 (226)
T 3lm2_A 163 --------------------------------------------------------N------------AKWQKRVQDVV 174 (226)
T ss_dssp --------------------------------------------------------H------------HHHHHHHHHHH
T ss_pred --------------------------------------------------------H------------HHHHHHHHHHH
Confidence 0 12345799999
Q ss_pred hHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHH
Q 011283 408 VSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTE 452 (489)
Q Consensus 408 aaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~ 452 (489)
+++++.++| ..|++||++.+..+.|.+.+++.+++
T Consensus 175 a~l~~~~dP----------~~IVlGG~~~~~~~~~~~~i~~~~~~ 209 (226)
T 3lm2_A 175 ERLSAALEP----------DEVVIGGGNVERLENLPPKCRRGDNA 209 (226)
T ss_dssp HHHHHHHCC----------SEEEEESGGGGGCCCCCTTEEECCTT
T ss_pred HHHHHHHCC----------CEEEEeChhhhhhhHHHHHHHHHHHH
Confidence 999999998 36999999999998887776665543
|
| >1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=182.22 Aligned_cols=278 Identities=18% Similarity=0.133 Sum_probs=165.5
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCce--eeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQ--REIG 168 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~--~~lG 168 (489)
++|+||+|||++|++++++.|+ ++.+. +.+ |.... .+.+++++.+.+.+.+++++.+.. ..+. ..+|
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~--~~~-~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~----~~~i~~~~ig 80 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMA--EGG-ASALS-QGIAKSWQAVLSTLEAAFQQAGLP----AAPASACAIG 80 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEE--EES-CCCGG-GCHHHHHHHHHHHHHHHHHHTTCC----CCCGGGEEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEE--eCC-CCCcc-cCHHHHHHHHHHHHHHHHHhcCCC----hhhhccceEE
Confidence 6899999999999999998774 55432 111 11111 347889999999999998765432 1233 5789
Q ss_pred eEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccCceEEEEEecC
Q 011283 169 FTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGT 248 (489)
Q Consensus 169 ~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGT 248 (489)
+++|+|++... |. + |++.+.+ ++|| .|.||++++++++. +.++.+.+++||
T Consensus 81 ig~pG~v~~~~--------~~-----------~----l~~~~~~-~~pv---~v~NDa~aaa~ge~--~~~~~v~v~~GT 131 (305)
T 1zc6_A 81 LGLSGVHNRQW--------AG-----------E----FESQAPG-FARL---SLATDGYTTLLGAH--GGQPGIIVALGT 131 (305)
T ss_dssp EEESCCCTTSH--------HH-----------H----HHHTCCC-CSEE---EEECHHHHHHHHHT--TTSSEEEEEESS
T ss_pred EEecCCCchHH--------HH-----------H----HHHhCCC-CceE---EEECCHHHHHHhhc--CCCCeEEEEecC
Confidence 99999987522 32 1 3332211 4666 79999999999973 346789999999
Q ss_pred CcceeEEe-eccccccccCCcCCCCCeeeecccccccCCCcc----cccccccccccCCcchhhhhhhhc--hhhHHHHH
Q 011283 249 GTNACYVE-QMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPL----TEFDRDMDAASINPGEQIYEKTIS--GMYLGEIV 321 (489)
Q Consensus 249 G~Na~yie-~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~----t~~D~~~D~~s~~pg~~~~Ek~~S--G~yLgei~ 321 (489)
|++++.+. +++. ..+++.|||.++...+..++.... ..+|-. .|..+..+|+|.+.+ +..| +
T Consensus 132 Gigg~~i~~~G~~-----~~aGe~Gh~~~d~g~~~~iG~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~l---~ 200 (305)
T 1zc6_A 132 GSIGEALYPDGSH-----REAGGWGYPSGDEASGAWLGQRAAQLTQMALDGR---HSHSPLTRAVLDFVGGDWQAM---M 200 (305)
T ss_dssp SEEEEEECTTSCE-----EEESCCCTTTSCTTSHHHHHHHHHHHHHHHHHTS---SCCCHHHHHHHHHHTSSHHHH---H
T ss_pred CeEEEEEeCCCcE-----EEecCcccccCCCchHHHHHHHHHHHHHHHHhCC---CCCChHHHHHHHHHCcCHHHH---H
Confidence 99755555 4432 223567777766322111111000 001110 111222456666664 3333 3
Q ss_pred HHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCc
Q 011283 322 RRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401 (489)
Q Consensus 322 R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~ 401 (489)
+.+. .. .+. .+. .....+++. + ..+++|+.+++++++
T Consensus 201 ~~~~----~~-------~~~-----------~~~----------~~~~~v~~~----------a-~GD~~A~~i~~~~~~ 237 (305)
T 1zc6_A 201 AWNG----RA-------TPA-----------QFA----------RLAPLVLSA----------A-RVDPEADALLRQAGE 237 (305)
T ss_dssp HHHH----TC-------CHH-----------HHH----------TTHHHHHHH----------T-TTCHHHHHHHHHHHH
T ss_pred HHHh----cc-------CHH-----------HHH----------HHHHHHHHH----------c-CCCHHHHHHHHHHHH
Confidence 2210 00 000 000 012234443 3 346999999999999
Q ss_pred cccchhhHHHHhhhccCCcccccceeEEEecCccccc-hhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhh
Q 011283 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEH-YTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLAS 480 (489)
Q Consensus 402 l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~-~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa 480 (489)
++|.+++++++. +| + .|+++||++.. .+.|.+.+++. +...++++.+|||++|.
T Consensus 238 ~L~~~l~~l~~~-~p--------~--~VvlgGgv~~~~~~~l~~~l~~~--------------i~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 238 DAWAIARALDPQ-DE--------L--PVALCGGLGQALRDWLPPGFRQR--------------LVAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHCTT-CC--------S--CEEEESHHHHHTGGGSCHHHHHH--------------CCCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHhcC-CC--------C--eEEEECCchHhHHHHHHHHHHhh--------------ccCCCCCHHHHHHHHHh
Confidence 999999999987 76 2 49999999874 45666666542 12246889999999875
Q ss_pred -ccccccC
Q 011283 481 -ANSKFDH 487 (489)
Q Consensus 481 -~~~~~~~ 487 (489)
...|+.|
T Consensus 293 ~~~~~~~~ 300 (305)
T 1zc6_A 293 RPSTRLEH 300 (305)
T ss_dssp --------
T ss_pred hhccchhh
Confidence 3444444
|
| >1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=180.13 Aligned_cols=277 Identities=13% Similarity=0.057 Sum_probs=160.7
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
||+||+|||++|+++++ +|+ ++.+. ..|+ +....+.+++++.|.+.+.+.+... ..+...+|++
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~---il~~~----~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-------~~~i~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK---SLGRF----QTSGINPFQQDRNEIDTALRSEVLPAIGQK-------ASSIRAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEEE----EEECCCTTTSCHHHHHHHHTTTTHHHHTTS-------TTTCCEEEEE
T ss_pred EEEEEeCccceEEEEEe-CCe---EEEEE----ECCCCCcccCCHHHHHHHHHHHHHHHhCCC-------cccccEEEEE
Confidence 79999999999999999 774 55432 2222 2212246788888888887764211 1235678888
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcC--cceEeeeeeccccccccccccccCceEEEEEecC
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG--LDMRVSALVNDTVGTLAGARYWDEDVMVAVILGT 248 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~--l~v~v~ai~NDtvatlla~~~~~~~~~iglIlGT 248 (489)
.|+++ . ..+ .++.+.|++.+ + .|| .|.||++++++++. +.++.+.+|+||
T Consensus 67 ~pG~~-~---~~~----------------~~l~~~l~~~~---~~~~pv---~v~NDa~~aa~ge~--g~~~~v~v~~GT 118 (291)
T 1zbs_A 67 GAGCT-P---AKA----------------PMLNEALDSML---PHCDRI---EVAGDMLGAARALC--GDSEGIACILGT 118 (291)
T ss_dssp ETTCC-T---TTH----------------HHHHHHHHHHS---TTCSEE---EEECHHHHHHHHHT--TTSCEEEEEESS
T ss_pred CCCCC-h---HHH----------------HHHHHHHHHhc---CCCCcE---EEeCcHHHHHHhhc--CCCCcEEEEecC
Confidence 88875 2 111 26777777766 5 365 89999999999984 668899999999
Q ss_pred Ccce-eEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcc-hhhhhhhhchhhHHHHHHHHHH
Q 011283 249 GTNA-CYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPG-EQIYEKTISGMYLGEIVRRVLL 326 (489)
Q Consensus 249 G~Na-~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg-~~~~Ek~~SG~yLgei~R~~l~ 326 (489)
|+++ +++.+++.. .+++.|||..+.. +.+ .+++.+ ..+++... +..|.+.++..+
T Consensus 119 Gigg~~i~~~G~~~-----~aGe~G~~~~d~g-~~~---------------~~G~~~~~~~~~~~~-~~~l~~~~~~~~- 175 (291)
T 1zbs_A 119 GSNSCLFDGREIKA-----NVSPLGYILGDEG-SGA---------------VLGRLFIGSLLKGQM-PEGLCEAFLQEY- 175 (291)
T ss_dssp SEEEEEECSSSEEE-----ECCCCHHHHCCTT-SHH---------------HHHHHHHHHHHTTCS-CTTHHHHHHHHT-
T ss_pred ChheEEECCCCcEE-----EeCCCccccCCCc-hHH---------------HHHHHHHHHHHHccC-CChHHHHHHHHh-
Confidence 9975 444564421 1234444444311 111 011100 01222222 444432222110
Q ss_pred HHhhhccccCCCccccccccccccCcccccccccCc--hhHh-hhhhhhhhhcccccccccceeeeeehhhhhhcCCccc
Q 011283 327 KMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYS--EDLQ-AVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLA 403 (489)
Q Consensus 327 ~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~--~~~~-~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~ 403 (489)
+.. ++.+. ..+..+.. .+.. .+..+++ +..+++|+.|++++++++
T Consensus 176 ---------~~~-~~~l~----------~~~~~~~~~~~~ia~~a~~v~~------------~~GD~~A~~i~~~~~~~L 223 (291)
T 1zbs_A 176 ---------GLT-SADII----------ESVYRKPFPNRFLAGFSPFIAQ------------HLDIPAVYSLVQNSFDDF 223 (291)
T ss_dssp ---------TCC-HHHHH----------HHHHHSSCHHHHHHTTHHHHHT------------TTTSHHHHHHHHHHHHHH
T ss_pred ---------CcC-HHHHH----------HHHHcCCCCHHHHHHhhHHHHH------------hCCCHHHHHHHHHHHHHH
Confidence 000 00000 00000000 0000 0112222 224589999999999999
Q ss_pred cchhhHHHHhh-hccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhhcc
Q 011283 404 GAGIVSILQKI-DEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLASAN 482 (489)
Q Consensus 404 aa~laaii~~~-~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa~~ 482 (489)
|.++ .++.+ +| + .|+++||+++. |.+.+++.+++.. +++....+++++||+.+|...
T Consensus 224 a~~i--~~~~~~~p--------~--~vvlgGGv~~~---~~~~l~~~l~~~~-------~~i~~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 224 LVRN--VLRYNRPD--------L--PLHFIGSVAFH---YREVLSSVIKKRG-------LTLGSVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHH--TGGGCCTT--------S--CEEEESHHHHH---THHHHHHHHHHTT-------CCEEEEESCSHHHHHHHHHHC
T ss_pred HHHH--hcccCCCC--------c--eEEEECchHHh---hHHHHHHHHHHcC-------CeecccCcCHHHHHHHHHHhh
Confidence 9999 45555 66 2 49999999876 5677777776643 234456699999999999888
Q ss_pred ccccCC
Q 011283 483 SKFDHD 488 (489)
Q Consensus 483 ~~~~~~ 488 (489)
.++.|.
T Consensus 282 ~~~~~~ 287 (291)
T 1zbs_A 282 HVLEHH 287 (291)
T ss_dssp CC----
T ss_pred hhhccc
Confidence 887764
|
| >1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-20 Score=184.43 Aligned_cols=268 Identities=15% Similarity=0.100 Sum_probs=150.2
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
+||+||+|||++|+++++ +|+ ++.+. ..|+ +....+.+++++.|.+.+.+.+.. .+...+|+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~---il~~~----~~~~~~~~~~~~~~~~~~i~~~i~~~~~~---------~~i~~igi 63 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGA---VIKRL----GTKGINPFFQSEEEIQQKLTASLLPQLPE---------GKFNAVYF 63 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSS---EEEEE----EECCCCTTTSCSTTTTTTTTC----------------------CEE
T ss_pred CEEEEEeccccEEEEEEc-CCe---EEEEE----ECCCCCcccCCHHHHHHHHHHHHHHhcCc---------ccccEEEE
Confidence 378999999999999999 774 55432 2222 111123566777777777665422 22456788
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcC--cceEeeeeeccccccccccccccCceEEEEEec
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG--LDMRVSALVNDTVGTLAGARYWDEDVMVAVILG 247 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~--l~v~v~ai~NDtvatlla~~~~~~~~~iglIlG 247 (489)
++|++. . .. +.++.+.|++.+ + +|| .|.||++++++++. +.++.+.+|+|
T Consensus 64 g~pG~~-~---~~----------------~~~l~~~l~~~~---~~~~pv---~v~NDa~~aalge~--g~~~~v~v~~G 115 (291)
T 1zxo_A 64 YGAGCT-P---EK----------------APVLRRAIADSL---PVIGNI---KANSDMLAAAHGLC--GQKAGIACILG 115 (291)
T ss_dssp ECTTCC-T---TT----------------THHHHHHHHHHS---CCCSCC---EEECSHHHHHHHTT--TTSCBEEEEES
T ss_pred EcCCCC-H---HH----------------HHHHHHHHHHhc---CCCceE---EEECcHHHHHHhhc--CCCCcEEEEeC
Confidence 888875 2 11 126777777766 5 476 79999999999995 66788999999
Q ss_pred CCcc-eeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcc-hhhhhhhhchhhHHHHHHHHH
Q 011283 248 TGTN-ACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPG-EQIYEKTISGMYLGEIVRRVL 325 (489)
Q Consensus 248 TG~N-a~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg-~~~~Ek~~SG~yLgei~R~~l 325 (489)
||++ ++++.+++.. .+++.|||+.+.. ..+ .+++.+ ..+++... +..|.+.++..+
T Consensus 116 TGi~g~gi~~~G~~~-----~aGe~Gh~~~d~g-~~~---------------~~G~~~~~~~~~~~~-~~~l~~~~~~~~ 173 (291)
T 1zxo_A 116 TGSNSCFYNGKEIVS-----NISPLGFILGDEG-SGA---------------VLGKLLVGDILKNQL-PATLKEEFLKQF 173 (291)
T ss_dssp SSEEEEEECSSSEEE-----ECCCCCTTTSCCS-SHH---------------HHHHHHHHHGGGTCS-CSHHHHHHHHHH
T ss_pred CChheEEECCCCcEE-----EeCCCccccCCCc-hHH---------------HHHHHHHHHHHHccC-CChHHHHHHHHh
Confidence 9995 7776665431 1234555544411 111 111110 01223222 556643333211
Q ss_pred HHHhhhccccCCCccccccc-ccc--ccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhcCCcc
Q 011283 326 LKMAEEGALFGNSVPEKLSM-PFV--LRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRL 402 (489)
Q Consensus 326 ~~~~~~~~lf~~~~~~~l~~-~~~--~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l 402 (489)
.. . ++.+.. .|. .+...++. .+..+++ +..+++|+.|++++++.
T Consensus 174 ---~~-------~-~~~l~~~~~~~~~~~~~ia~----------~a~~v~~------------~~GD~~A~~i~~~~~~~ 220 (291)
T 1zxo_A 174 ---DL-------T-PPEIIDRVYRQPFPNRFLAS----------LSPFIAQ------------HLEEPAIRQLVMNSFIA 220 (291)
T ss_dssp ---TC-------C-HHHHGGGTTTSSCSTTTSST----------TTHHHHT------------TTTSTTTTHHHHHHHHH
T ss_pred ---CC-------C-HHHHHHHHhcCCCCHHHHHH----------hhHHHHH------------hCCCHHHHHHHHHHHHH
Confidence 00 0 000000 000 00000000 0111221 22348999999999999
Q ss_pred ccchhhHHHHhh-hccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchhHHHHhh
Q 011283 403 AGAGIVSILQKI-DEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAALLAS 480 (489)
Q Consensus 403 ~aa~laaii~~~-~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iGAA~~aa 480 (489)
+|.++ . ++.+ +| + .|+++||+++. |.+.+++.+++ + .++++.+++++++|||.+|.
T Consensus 221 La~~i-~-~~~~~~p--------~--~vvlgGGv~~~---l~~~l~~~l~~---~----~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 221 FFRRN-V-MQYDYKQ--------Y--PVHFIGSIAYC---YKEILQDAARQ---T----GIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp HHTTT-G-GGSCTTT--------S--CEEECSHHHHH---THHHHHHHTTT---T----TCCEEEECSCTHHHHHTTSS
T ss_pred HHHHH-h-cccCCCC--------c--eEEEECcHHHH---HHHHHHHHHhc---C----CcEEeecCCCHHHHHHHHHH
Confidence 99999 3 4554 66 2 49999999886 77888777655 1 34666778999999998864
|
| >3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00018 Score=76.48 Aligned_cols=85 Identities=18% Similarity=0.146 Sum_probs=57.8
Q ss_pred CccccEEEEecCCcceEEEEEEeCCccceeeecccccccc--cc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCc
Q 011283 87 NERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGR 163 (489)
Q Consensus 87 ~E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~ 163 (489)
....++|+||+|+|++|+++++.+|+ ++.+....++. |. .....+++++++.+.+++++++++.+... .+
T Consensus 4 ~~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~ 76 (508)
T 3ifr_A 4 AQGRQVIGLDIGTTSTIAILVRLPDT---VVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESD----WR 76 (508)
T ss_dssp ---CEEEEEEECSSEEEEEEEETTTE---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGG----CC
T ss_pred ccCCEEEEEEecCcceEEEEECCCCC---EEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCCh----hh
Confidence 34568999999999999999998774 55543222221 11 11234688999999999999987655321 45
Q ss_pred eeeeeeEEee----ecccc
Q 011283 164 QREIGFTFSF----PVKQT 178 (489)
Q Consensus 164 ~~~lG~tfSf----P~~q~ 178 (489)
+..|||+... ++|..
T Consensus 77 I~~Igis~~~~~~v~~D~~ 95 (508)
T 3ifr_A 77 PGGICVTGMLPAVVLLDDR 95 (508)
T ss_dssp EEEEEEEECSSCBEEECTT
T ss_pred eEEEEEECCCCcEEEECCC
Confidence 6778888777 77753
|
| >4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00043 Score=73.84 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=55.5
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeeccccccc--ccc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVS--IPQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~--ip~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~ 166 (489)
.+|||||+|+|++|+++++.+|+ ++......++ .|. .....+++++++.+.+++++++++.+... .++..
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~I~~ 98 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITA----NDIAA 98 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEE
T ss_pred CeEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEE
Confidence 36899999999999999998775 5544322222 121 11234688999999999999987654321 35677
Q ss_pred eeeEEee----ecc
Q 011283 167 IGFTFSF----PVK 176 (489)
Q Consensus 167 lG~tfSf----P~~ 176 (489)
|||+... ++|
T Consensus 99 Igis~~g~~~v~~D 112 (520)
T 4e1j_A 99 IGITNQRETVVVWD 112 (520)
T ss_dssp EEEEECSSCEEEEE
T ss_pred EEEeCCcceEEEEE
Confidence 7777776 677
|
| >2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00072 Score=71.58 Aligned_cols=80 Identities=18% Similarity=0.227 Sum_probs=54.7
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--cc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
+|||||+|||++|+++++.+|+ ++......++. |. .....+++++++.+.+++++++++.+... .++..|
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~~I 75 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEA----GEVLAL 75 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGCCEE
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999998774 55443222221 11 11123678999999999999987654321 346677
Q ss_pred eeEEe----eeccc
Q 011283 168 GFTFS----FPVKQ 177 (489)
Q Consensus 168 G~tfS----fP~~q 177 (489)
||+.. .++|.
T Consensus 76 gis~~~~~~~~vD~ 89 (495)
T 2dpn_A 76 GITNQRETTLLWDR 89 (495)
T ss_dssp EEEECSSCBEEEET
T ss_pred EEeCCCccEEEEEC
Confidence 77777 47775
|
| >1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00052 Score=66.87 Aligned_cols=26 Identities=19% Similarity=0.356 Sum_probs=21.9
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeec
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQAT 119 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~ 119 (489)
+||+||+|+|++|+++++.+|+ ++..
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~g~---i~~~ 29 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDGKE---IVAK 29 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTE---EEEE
T ss_pred EEEEEEeccceEEEEEEeCCCC---EEEE
Confidence 6899999999999999997663 6553
|
| >2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.001 Score=70.63 Aligned_cols=80 Identities=8% Similarity=-0.066 Sum_probs=54.3
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--cch-hhccChHHHHHHHHHhhhhHHHhh--cCccccCCCcee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQE-LMCGTSEELFDFIATGLAKFAEKE--AGKFHLPQGRQR 165 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~i~~~~~~~--~~~~~~~~~~~~ 165 (489)
+||+||+|||++|+++++.+|+ ++.+....++. |.. ....+++++++.+.+++.+++++. +.. ..++.
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~----~~~i~ 77 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYT----SVIIK 77 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSS----SCEEE
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCC----ccceE
Confidence 6899999999999999998774 55443222221 111 112368899999999999998764 321 13466
Q ss_pred eeeeEEe----eeccc
Q 011283 166 EIGFTFS----FPVKQ 177 (489)
Q Consensus 166 ~lG~tfS----fP~~q 177 (489)
.|||+.. .++|.
T Consensus 78 ~Igis~~~~~~~~~D~ 93 (503)
T 2w40_A 78 CIGITNQRETVIIWDR 93 (503)
T ss_dssp EEEEEECSSCEEEEET
T ss_pred EEEEcCCcceEEEEEC
Confidence 7777777 47775
|
| >3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00067 Score=71.96 Aligned_cols=81 Identities=14% Similarity=0.213 Sum_probs=54.5
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccc--cc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~ 166 (489)
.++||||+|+|++|+++++.+|+ ++.+....++. |. .....+++++++.+.+++++++++.+... .++..
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~I~~ 78 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRA----DQIAG 78 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEE
T ss_pred cEEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEE
Confidence 36899999999999999999775 55443222221 11 11234688999999999999988754321 34566
Q ss_pred eeeEEe----eeccc
Q 011283 167 IGFTFS----FPVKQ 177 (489)
Q Consensus 167 lG~tfS----fP~~q 177 (489)
|||+.. .++|.
T Consensus 79 Igis~~~~~~v~~D~ 93 (501)
T 3g25_A 79 IGITNQRETTVVWDK 93 (501)
T ss_dssp EEEEECSSCEEEEET
T ss_pred EEEECCcCcEEEEEC
Confidence 666654 46665
|
| >2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.001 Score=70.41 Aligned_cols=81 Identities=15% Similarity=0.147 Sum_probs=54.3
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--cc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
+|||||+|||++|+++++.+|+ ++.+....++. |. .....+++++++.+.+++.+++++.+... .++..|
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~i~~I 76 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEP----NQIAAI 76 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEEE
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999998764 55443222221 11 11123678999999999999987754321 345667
Q ss_pred eeEEee----ecccc
Q 011283 168 GFTFSF----PVKQT 178 (489)
Q Consensus 168 G~tfSf----P~~q~ 178 (489)
||+... ++|.+
T Consensus 77 gis~~~~~~v~~D~~ 91 (497)
T 2zf5_O 77 GVTNQRETTLVWDKD 91 (497)
T ss_dssp EEEECSSCEEEECTT
T ss_pred EEecCCCcEEEECCC
Confidence 777665 66653
|
| >3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00087 Score=71.21 Aligned_cols=82 Identities=15% Similarity=0.187 Sum_probs=54.2
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeeccccccc--ccc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCcee
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVS--IPQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~--ip~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~ 165 (489)
+.++||||+|+|++|+++++.+|+ ++......++ .|. .....+++++++.+.+++++++++.+... .++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~----~~I~ 76 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRP----EAIA 76 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEE
T ss_pred CCEEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hheE
Confidence 357999999999999999998775 5544322222 121 11234688999999999999988755321 3455
Q ss_pred eeeeEEe----eeccc
Q 011283 166 EIGFTFS----FPVKQ 177 (489)
Q Consensus 166 ~lG~tfS----fP~~q 177 (489)
.|||+.. .++|.
T Consensus 77 ~Igis~~~~~~v~~D~ 92 (506)
T 3h3n_X 77 GIGITNQRETTVVWDK 92 (506)
T ss_dssp EEEEEECSSCBEEEET
T ss_pred EEEeeCCcccEEEEeC
Confidence 5665543 25664
|
| >2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0012 Score=69.78 Aligned_cols=79 Identities=14% Similarity=0.343 Sum_probs=54.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--cch-hhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQE-LMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
.|||||+|||++|+++++.+|+ ++......+++ |.. ....+++++++.+.+++++++++.. ..++..|
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~------~~~i~~I 71 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS------LQDVKAL 71 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC------CTTCCEE
T ss_pred CEEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC------ccceEEE
Confidence 3799999999999999998774 54443212221 111 1123678999999999999886532 1346778
Q ss_pred eeEEee----ecccc
Q 011283 168 GFTFSF----PVKQT 178 (489)
Q Consensus 168 G~tfSf----P~~q~ 178 (489)
||+... ++|..
T Consensus 72 gis~~~~~~v~~D~~ 86 (484)
T 2itm_A 72 GIAGQMHGATLLDAQ 86 (484)
T ss_dssp EEEECSSCBEEECTT
T ss_pred EEcCCcCcEEEECCC
Confidence 888877 77764
|
| >4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00058 Score=66.34 Aligned_cols=36 Identities=6% Similarity=0.057 Sum_probs=24.6
Q ss_pred eeeccccccccccccccCceEEEEEecCCcceeEEe
Q 011283 221 ALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVE 256 (489)
Q Consensus 221 ai~NDtvatlla~~~~~~~~~iglIlGTG~Na~yie 256 (489)
..+|...|.+++..+..+.....+.+|.|..-+++.
T Consensus 75 ~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~ 110 (276)
T 4ehu_A 75 KQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKL 110 (276)
T ss_dssp EECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEE
T ss_pred cccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEE
Confidence 467888888888777666555666666666555544
|
| >2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00089 Score=71.05 Aligned_cols=80 Identities=14% Similarity=0.153 Sum_probs=55.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccc--cch-hhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQE-LMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
++||||+|+|++|+++++.+|+ ++.+....++. |.. ....+++++++.+.+++.+++++.+... .++..|
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~~I 75 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTH----EDIAAV 75 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGEEEE
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCc----ccEEEE
Confidence 6899999999999999998774 55443222221 111 1123678999999999999987754321 346777
Q ss_pred eeEEee----eccc
Q 011283 168 GFTFSF----PVKQ 177 (489)
Q Consensus 168 G~tfSf----P~~q 177 (489)
||+... ++|.
T Consensus 76 gis~~g~~~v~vD~ 89 (504)
T 2d4w_A 76 GITNQRETAVVWDK 89 (504)
T ss_dssp EEEECSSCBEEEET
T ss_pred EEeCCCCeEEEEEC
Confidence 777775 7775
|
| >3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0017 Score=62.51 Aligned_cols=168 Identities=18% Similarity=0.248 Sum_probs=89.9
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
-+|+||+|+||+++++++ ++ ++.. .|+++++.. .+.+++..++.+.+.. .. .+...++++
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~---~l~~----~~r~~T~~~-~t~de~~~~l~~l~~~--~~---------~~i~~i~Is 63 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DG---KTFR----RWRLSTGVF-QTEDELFSHLHPLLGD--AM---------REIKGIGVA 63 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SS---SSCE----EEEEECCTT-CCHHHHHHHHHHHHGG--GG---------GGEEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-CC---EEEE----EEEecCCCC-CCHHHHHHHHHHHHhh--cc---------ccCCEEEEE
Confidence 379999999999999997 23 2443 356665432 3567777777665543 11 122334444
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHH--------hc-CcceEeeeeec------ccccccccccc
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME--------RQ-GLDMRVSALVN------DTVGTLAGARY 235 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~--------~~-~l~v~v~ai~N------Dtvatlla~~~ 235 (489)
...|-.... +.+.+++.+. +. |+++ ...| |-.+.+++...
T Consensus 64 SVvp~~~~~----------------------~~~~~~~~~~~~p~~v~~~~~gl~~---~y~~P~~lG~DR~~~~~aa~~ 118 (249)
T 3bex_A 64 SVVPTQNTV----------------------IERFSQKYFHISPIWVKAKNGCVKW---NVKNPSEVGADRVANVVAFVK 118 (249)
T ss_dssp ESCHHHHHH----------------------HHHHHHHHHSCCCEECCCCSSSSEE---CSSCGGGSCHHHHHHHHHHHH
T ss_pred cCcHHHHHH----------------------HHHHHHHhcCCCeEEEEccCCCcee---ccCChhhcCHHHHHHHHHHHH
Confidence 444321111 1111111110 01 2222 3444 66677777655
Q ss_pred ccCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeeccccc----c---cCCCcccccccccccccCCcchhhh
Q 011283 236 WDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGA----F---SKGLPLTEFDRDMDAASINPGEQIY 308 (489)
Q Consensus 236 ~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~----f---~~~lp~t~~D~~~D~~s~~pg~~~~ 308 (489)
......+-+-+||.+.-.++.+++- . |-.|. +..+. . ...||.-+.+. .....|+..-
T Consensus 119 ~~~~~~iVvD~GTA~T~d~v~~g~~----l------GG~I~-PGi~l~~~aL~~~ta~Lp~v~~~~----~~~~~g~nT~ 183 (249)
T 3bex_A 119 EYGKNGIIIDMGTATTVDLVVNGSY----E------GGAIL-PGFFMMVHSLFRGTAKLPLVEVKP----ADFVVGKDTE 183 (249)
T ss_dssp HTCSCEEEEEESSEEEEEEEETTEE----E------EEEEE-ECHHHHHHHHHHTCSSCCCCCCCC----CCSSSBSSHH
T ss_pred HcCCCEEEEEcCCceEEEEEeCCeE----e------eEEEC-ccHHHHHHHHHHhhhcCCCCcccC----CCCCCCCCHH
Confidence 4456789999999999999943321 1 11221 11111 1 12455443322 2234567889
Q ss_pred hhhhchhhHH
Q 011283 309 EKTISGMYLG 318 (489)
Q Consensus 309 Ek~~SG~yLg 318 (489)
|.|-||.+.|
T Consensus 184 ~ai~sGi~~g 193 (249)
T 3bex_A 184 ENIRLGVVNG 193 (249)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999997664
|
| >3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0016 Score=69.53 Aligned_cols=77 Identities=18% Similarity=0.225 Sum_probs=52.7
Q ss_pred CccccEEEEecCCcceEEEEEEeCCccceeeecccccccc--cc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCc
Q 011283 87 NERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGR 163 (489)
Q Consensus 87 ~E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~ 163 (489)
+|+.+|||||+|.|++|+++++.+|+ ++...++.++. |. .....+++++++.+.++|.+.+++.+... .+
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~----~~ 73 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISS----DQ 73 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GG
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hh
Confidence 47889999999999999999998775 54443223321 21 12234688999999999999998776432 34
Q ss_pred eeeeeeE
Q 011283 164 QREIGFT 170 (489)
Q Consensus 164 ~~~lG~t 170 (489)
+..|||+
T Consensus 74 I~aIgis 80 (526)
T 3ezw_A 74 IAAIGIT 80 (526)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5556654
|
| >3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0018 Score=69.45 Aligned_cols=75 Identities=15% Similarity=0.316 Sum_probs=50.9
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeecccccccc--c-chhhccChHHHHHHHHHhhhhHHHhhcCccccCCCcee
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--P-QELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~ 165 (489)
..++||||+|+|++|+++++.+|+ ++...+..+++ | ......+++++++.+.+++++++++.+... .++.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~----~~I~ 76 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINP----IQVK 76 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCG----GGEE
T ss_pred CcEEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCH----hHEE
Confidence 347899999999999999998775 55443222221 1 111234688999999999999988765321 3455
Q ss_pred eeeeE
Q 011283 166 EIGFT 170 (489)
Q Consensus 166 ~lG~t 170 (489)
.|||+
T Consensus 77 ~Igis 81 (554)
T 3l0q_A 77 GLGFD 81 (554)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 66654
|
| >3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0058 Score=64.87 Aligned_cols=74 Identities=9% Similarity=0.058 Sum_probs=49.2
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccc--cc-hhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--PQ-ELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~ 166 (489)
.++||||+|+|++|+++++.+|+ ++...+..+++ |. .....+++++++.+.+++++++ +.+... .++..
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~----~~I~~ 76 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDA----RRVSA 76 (511)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCG----GGEEE
T ss_pred cEEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCCh----hHeEE
Confidence 37899999999999999998774 55443222221 11 1123468899999999999998 543221 34556
Q ss_pred eeeEE
Q 011283 167 IGFTF 171 (489)
Q Consensus 167 lG~tf 171 (489)
|||+.
T Consensus 77 Igis~ 81 (511)
T 3hz6_A 77 IVLSG 81 (511)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 66654
|
| >3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0031 Score=66.90 Aligned_cols=61 Identities=13% Similarity=0.174 Sum_probs=43.7
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccc--c-chhhccChHHHHHHHHHhhhhHHHhh
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI--P-QELMCGTSEELFDFIATGLAKFAEKE 153 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~~~~~~ 153 (489)
.+|||||+|+|++|+++++.+|+ ++...+..++. | ......+++++++.+.+++++++++.
T Consensus 4 ~~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhC
Confidence 47899999999999999998774 55443222221 1 11123468899999999999998754
|
| >2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0063 Score=64.12 Aligned_cols=78 Identities=19% Similarity=0.199 Sum_probs=50.7
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeeccccccc------ccch-hhccChHHHHHHHHHhhhhHHHhhcCccccCCC
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVS------IPQE-LMCGTSEELFDFIATGLAKFAEKEAGKFHLPQG 162 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~------ip~~-~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~ 162 (489)
..|||||+|+|++|+++++.+|+ ++......+. .|.. ....+.+++++.+.++++++.... .
T Consensus 4 ~~~lgiDiGtts~k~~l~d~~g~---~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~~--------~ 72 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARYERE---CRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAAG--------I 72 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEEEGG---GTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHTT--------C
T ss_pred ceEEEEEecCCCceEEEEEecCc---cceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhCC--------C
Confidence 35899999999999999998764 2221111111 1211 112357788988888888875421 3
Q ss_pred ceeeeeeEE----eeecccc
Q 011283 163 RQREIGFTF----SFPVKQT 178 (489)
Q Consensus 163 ~~~~lG~tf----SfP~~q~ 178 (489)
++..|||+. ..++|..
T Consensus 73 ~i~~Igis~q~~~~v~~D~~ 92 (489)
T 2uyt_A 73 AIDSIGIDTWGVDFVLLDQQ 92 (489)
T ss_dssp CCCEEEEEECSSCEEEECTT
T ss_pred CceEEEEecCcccEEEECCC
Confidence 467888888 8888863
|
| >3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.013 Score=56.89 Aligned_cols=50 Identities=18% Similarity=0.235 Sum_probs=33.5
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhc
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
.+|+||+|+||+++++++- + ++.. +|++|+. . .+.+++..+ +.++++..+
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~---~l~~----~~r~~T~-~-~t~de~~~~----l~~ll~~~~ 52 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-D---EIKL----RFRHTSK-V-STSDELGIF----LKSVLRENN 52 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-T---EEEE----EEEEECS-C-CCHHHHHHH----HHHHHHTTT
T ss_pred eEEEEEECCCeEEEEEEEC-C---EEEE----EEEecCC-C-CCHHHHHHH----HHHHHHHcC
Confidence 4799999999999999974 3 3554 4677766 2 356665444 444554443
|
| >3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.019 Score=60.92 Aligned_cols=74 Identities=9% Similarity=0.047 Sum_probs=49.0
Q ss_pred cccEEEEecCCcceEEEEEE-eCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 89 RGLFYALDLGGTNFRVLRVQ-LGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~-l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
..++|+||+|+|++|+++++ .+|+ ++.+.. .+.|... ..+++++++.+.+++++.- . ..++..|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~---i~~~~~--~~~~g~~-e~d~~~~~~~i~~~l~~~~----~-----~~~I~~I 68 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE---LVRFGQ--AKHPNGT-SVDPSYWWSAFQEAAEQAG----G-----LDDVSAL 68 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC---EEEEEE--EECCSSS-EECTHHHHHHHHHHHHHTT----C-----STTEEEE
T ss_pred CcEEEEEEeccccEEEEEEECCCCe---EEEEEE--EeCCCCc-eECHHHHHHHHHHHHHhcC----C-----ccCceEE
Confidence 34789999999999999999 6774 555442 3444322 2467888988888776531 1 1345666
Q ss_pred eeEEee----eccc
Q 011283 168 GFTFSF----PVKQ 177 (489)
Q Consensus 168 G~tfSf----P~~q 177 (489)
||+.-. ++|.
T Consensus 69 gis~q~~~~v~~D~ 82 (515)
T 3i8b_A 69 AVGGQQHGMVILDN 82 (515)
T ss_dssp EEEECSSCBEEECT
T ss_pred EEeCCcceEEEECC
Confidence 666654 5565
|
| >3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0087 Score=63.08 Aligned_cols=58 Identities=17% Similarity=0.173 Sum_probs=39.8
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccc-cc-hhhccChHHHHHHHHHhhhhHH
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSI-PQ-ELMCGTSEELFDFIATGLAKFA 150 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~i-p~-~~~~~~~~~lfd~Ia~~i~~~~ 150 (489)
.+||+||+|+|++|+++++.+|+ ++...+..+++ |. .....+++++++.+.+++++++
T Consensus 6 ~~~lgIDiGTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWDLDGR---MLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp --CEEEEECSSEEEEEEECTTSC---EEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEcCCCCeEEEEEECCCc---EEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 36899999999999999997664 55443222221 11 1112468899999999999886
|
| >2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=92.53 E-value=0.67 Score=44.73 Aligned_cols=46 Identities=20% Similarity=0.247 Sum_probs=30.6
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhh
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGL 146 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i 146 (489)
+|+||+|+||+++++++- + ++.. .|+++++.. .+.+++..++.+.+
T Consensus 2 lL~IDIGNT~ik~gl~~~-~---~l~~----~~r~~T~~~-~t~de~~~~l~~ll 47 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE-G---ELRQ----HWRMETDRH-KTEDEYGMLVKQLL 47 (268)
T ss_dssp EEEEEECSSEEEEEEEET-T---EEEE----EEEEECCTT-CCHHHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEEC-C---EEEE----EEEecCCCc-CCHHHHHHHHHHHH
Confidence 689999999999999972 2 3444 356665432 34666666654443
|
| >4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* | Back alignment and structure |
|---|
Probab=91.79 E-value=0.23 Score=52.82 Aligned_cols=28 Identities=18% Similarity=0.137 Sum_probs=23.4
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecc
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATE 120 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~ 120 (489)
.+||+||+|.|++|++++|.+|+ ++...
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~G~---vv~~~ 37 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAELN---VFYEE 37 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE
T ss_pred CEEEEEEEcCcCEEEEEECCCCC---EEEEE
Confidence 47999999999999999998774 55544
|
| >2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=87.52 E-value=4.4 Score=40.26 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHhcCcceEeeeeeccccccccccccc--c--CceEEEEEecCCcceeEEee
Q 011283 201 DVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW--D--EDVMVAVILGTGTNACYVEQ 257 (489)
Q Consensus 201 dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~--~--~~~~iglIlGTG~Na~yie~ 257 (489)
+..+.+.+++++.|+++ ..|+|...|++.+.... . ....+-+=+|.|+--..+..
T Consensus 151 ~~v~~~~~~~~~aGl~~--~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~ 209 (377)
T 2ych_A 151 EAVAGVLEALRGAGLVP--VVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLR 209 (377)
T ss_dssp HHHHHHHHHHHHTTCEE--EEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCce--EEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEE
Confidence 44577778887778876 58999999988874321 1 23455566777765555443
|
| >4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} | Back alignment and structure |
|---|
Probab=86.55 E-value=2.7 Score=42.44 Aligned_cols=54 Identities=17% Similarity=0.200 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHhcCcceEeeeeecccccccccccccc-----CceEEEEEecCCcceeEEe
Q 011283 201 DVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD-----EDVMVAVILGTGTNACYVE 256 (489)
Q Consensus 201 dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~-----~~~~iglIlGTG~Na~yie 256 (489)
.-.+.++++.++.|+++ +.++|+..|++++..... ....+-+=+|-||--..+.
T Consensus 164 ~~r~~~~~a~~~AGl~~--~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~ 222 (409)
T 4gni_A 164 KQKAALIAAAAAADLEV--LQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVL 222 (409)
T ss_dssp HHHHHHHHHHHHTTCEE--EEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCe--EEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEE
Confidence 45677888887778865 689999999988755432 2334444467666544443
|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} | Back alignment and structure |
|---|
Probab=86.44 E-value=5.7 Score=37.36 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=18.9
Q ss_pred cccEEEEecCCcceEEEEEEeCC
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGG 111 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g 111 (489)
...|++||+|.|++|+.+++..+
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~~~ 49 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQEG 49 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECTTC
T ss_pred CCEEEEEEcccceEEEEEECCCC
Confidence 35789999999999999976443
|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... | Back alignment and structure |
|---|
Probab=86.32 E-value=2.7 Score=42.35 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHhcCcceEeeeeeccccccccccccc------cCceEEEEEecCCcceeEEe
Q 011283 201 DVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW------DEDVMVAVILGTGTNACYVE 256 (489)
Q Consensus 201 dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~------~~~~~iglIlGTG~Na~yie 256 (489)
.-.+.++++.++.|+++ +.++|+..|++++.... .....+-+=+|-||--..+.
T Consensus 172 ~~r~~~~~a~~~AGl~~--~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 172 SQRQATKDAGTITGLNV--LRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp HHHHHHHHHHHHHTCEE--EEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCe--EEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEE
Confidence 44677778877678864 68999999999875442 22334444467666544444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 489 | ||||
| d1ig8a2 | 262 | c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Sa | 5e-88 | |
| d1czan4 | 243 | c.55.1.3 (N:671-913) Mammalian type I hexokinase { | 1e-86 | |
| d1v4sa2 | 243 | c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapi | 3e-86 | |
| d1bdga2 | 237 | c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schi | 8e-86 | |
| d1czan2 | 243 | c.55.1.3 (N:223-465) Mammalian type I hexokinase { | 2e-84 | |
| d1v4sa1 | 205 | c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapie | 5e-77 | |
| d1bdga1 | 208 | c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schis | 1e-76 | |
| d1czan3 | 205 | c.55.1.3 (N:466-670) Mammalian type I hexokinase { | 4e-74 | |
| d1czan1 | 207 | c.55.1.3 (N:16-222) Mammalian type I hexokinase {H | 1e-73 | |
| d1ig8a1 | 207 | c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Sac | 7e-73 | |
| d2ch5a1 | 227 | c.55.1.5 (A:118-344) N-acetylglucosamine kinase, N | 1e-04 |
| >d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Score = 268 bits (686), Expect = 5e-88
Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 19/257 (7%)
Query: 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKS----PSGRTIINTEWGAFSKG---LPLTE 291
+ + VI GTG N Y + I KLQG S PS IN E+G+F LP T+
Sbjct: 1 ETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNEHVVLPRTK 60
Query: 292 FDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRT 351
+D +D S PG+Q +EK SG YLGEI+R L+ M ++G +F N K PFV+ T
Sbjct: 61 YDITIDEESPRPGQQTFEKMSSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDT 120
Query: 352 PHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSIL 411
+ +++D E+L+ + G+ ++++ RK++ + + I R RL+ GI +I
Sbjct: 121 SYPARIEEDPFENLEDTDDLFQNEFGINTTVQERKLIRRLSELIGARAARLSVCGIAAIC 180
Query: 412 QKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEIS----KNVVIEHT 467
QK +A DG +Y Y ++ A+ ++ G + + I
Sbjct: 181 QKRGYK--------TGHIAADGSVYNRYPGFKEKAANALKDIYGWTQTSLDDYPIKIVPA 232
Query: 468 KDGSGIGAALLASANSK 484
+DGSG GAA++A+ K
Sbjct: 233 EDGSGAGAAVIAALAQK 249
|
| >d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 264 bits (676), Expect = 1e-86
Identities = 86/247 (34%), Positives = 132/247 (53%), Gaps = 14/247 (5%)
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPL----TEFDRDMD 297
V +I+GTG+NACY+E+M + ++G G+ IN EWGAF L T +DR +D
Sbjct: 4 VGLIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVD 60
Query: 298 AASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAM 357
S+N G+Q YEK ISGMYLGEIVR +L+ ++G LF + E L + T + +
Sbjct: 61 EYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQI 120
Query: 358 QQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDED 417
+ D LQ + G+ S+ +V VC + +R +L GAG+ +++ KI E+
Sbjct: 121 ESDRLALLQV--RAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN 178
Query: 418 SNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAAL 477
+ V +DG LY+ + + R +H+ V EL NV ++DGSG GAAL
Sbjct: 179 RG--LDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSP---KCNVSFLLSEDGSGKGAAL 233
Query: 478 LASANSK 484
+ + +
Sbjct: 234 ITAVGVR 240
|
| >d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 262 bits (672), Expect = 3e-86
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG----LPLTEFDRDMD 297
V +I+GTG NACY+E+M + ++G GR +NTEWGAF L E+DR +D
Sbjct: 4 VGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVD 60
Query: 298 AASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAM 357
+S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF E+L T + +
Sbjct: 61 ESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQV 120
Query: 358 QQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDED 417
+ D + Q + G+ S +V C+++ R + AG+ ++ ++ E
Sbjct: 121 ESDTGDRKQIYN--ILSTLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRES 178
Query: 418 SNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAAL 477
+ + R V +DG +Y+ + ++ H +V L S + +++GSG GAAL
Sbjct: 179 RSEDV--MRITVGVDGSVYKLHPSFKERFHASVRRLTP---SCEITFIESEEGSGRGAAL 233
Query: 478 LASANSK 484
+++ K
Sbjct: 234 VSAVACK 240
|
| >d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Score = 261 bits (669), Expect = 8e-86
Identities = 83/245 (33%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAF----SKGLPLTEFDRDMD 297
V +I+GTGTN Y+E + + G K P +INTEWGAF T+FD+ MD
Sbjct: 4 VGLIVGTGTNVAYIEDSSKVELMDGVKEP--EVVINTEWGAFGEKGELDCWRTQFDKSMD 61
Query: 298 AASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAM 357
S++PG+Q+YEK +SGMYLGE+VR +++ + E+ LF +PE+L + L T ++ +
Sbjct: 62 IDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDV 121
Query: 358 QQDYSEDLQAVGSTLYDVAGVES-SLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDE 416
++D + L L D V ++V C+ +VKR LAGAGI IL++I+
Sbjct: 122 ERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINR 181
Query: 417 DSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAA 476
V +DG LY+ + ++ + + V +L + ++DGSG GAA
Sbjct: 182 --------SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKN--TRFCLRLSEDGSGKGAA 231
Query: 477 LLASA 481
+A++
Sbjct: 232 AIAAS 236
|
| >d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 258 bits (660), Expect = 2e-84
Identities = 92/247 (37%), Positives = 137/247 (55%), Gaps = 14/247 (5%)
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPL----TEFDRDMD 297
V +I+GTGTNACY+E++ I ++G GR INTEWGAF L TEFDR +D
Sbjct: 4 VGLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDRAID 60
Query: 298 AASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAM 357
A S+NPG+Q++EK +SGMYLGE+VR +L+KMA+EG LF + +L T + A+
Sbjct: 61 AYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAI 120
Query: 358 QQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDED 417
+++ E L L + GVE S V VC + R L A + +IL ++ ++
Sbjct: 121 EKN-KEGLHNAKEILTRL-GVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDN 178
Query: 418 SNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIGAAL 477
RT V +DG LY+ + QY R H+ + L+ +V ++ GSG GAA+
Sbjct: 179 KGTP--RLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVP---DSDVRFLLSESGSGKGAAM 233
Query: 478 LASANSK 484
+ + +
Sbjct: 234 VTAVAYR 240
|
| >d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 238 bits (608), Expect = 5e-77
Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 10/208 (4%)
Query: 35 ILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLF 92
++ ++ E L+ V M +M GL ++ E +KM+ +YV + P G+E G F
Sbjct: 2 LVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDF 61
Query: 93 YALDLGGTNFRVLRVQLGGQEE--RVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFA 150
+LDLGGTNFRV+ V++G EE T+ + SIP++ M GT+E LFD+I+ ++ F
Sbjct: 62 LSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFL 121
Query: 151 EKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAM 210
+K H + ++ +GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A+
Sbjct: 122 DK-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAI 176
Query: 211 ERQG-LDMRVSALVNDTVGTLAGARYWD 237
+R+G +M V A+VNDTV T+ Y D
Sbjct: 177 KRRGDFEMDVVAMVNDTVATMISCYYED 204
|
| >d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Score = 237 bits (605), Expect = 1e-76
Identities = 76/211 (36%), Positives = 109/211 (51%), Gaps = 8/211 (3%)
Query: 29 NVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDG--GGELKMILSYVDALPTG 86
+ + + ++ K + + D M MR GL +KM SYV P G
Sbjct: 3 DQQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNG 62
Query: 87 NERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGL 146
E G F ALDLGGTN+RVL V L G+ + + + IP E M G+ ELF +IA L
Sbjct: 63 TETGNFLALDLGGTNYRVLSVTLEGKGKSPR-IQERTYCIPAEKMSGSGTELFKYIAETL 121
Query: 147 AKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACL 206
A F E + + ++ ++GFTFSFP Q + L++WTKGFS G G +V L
Sbjct: 122 ADFLEN-----NGMKDKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELL 176
Query: 207 NEAMERQGLDMRVSALVNDTVGTLAGARYWD 237
++++ L+++ A+VNDTVGTLA D
Sbjct: 177 QTELDKRELNVKCVAVVNDTVGTLASCALED 207
|
| >d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 230 bits (588), Expect = 4e-74
Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 8/205 (3%)
Query: 36 LTKLQKECAAPLPVLRNVADAMTADMRAGLVVDG--GGELKMILSYVDALPTGNERGLFY 93
+ + +L V M A+M GL +KM+ S+V P G E G F
Sbjct: 5 IEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFL 64
Query: 94 ALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKE 153
ALDLGGTNFRVL V++ ++R + +IP E+M GT EELFD I + ++ F +
Sbjct: 65 ALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDY- 123
Query: 154 AGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQ 213
+G + +GFTFSFP +QTS+D+G+LI WTKGF + G DVV L +A++R+
Sbjct: 124 ----MGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRR 179
Query: 214 -GLDMRVSALVNDTVGTLAGARYWD 237
D+ V A+VNDTVGT+ Y +
Sbjct: 180 EEFDLDVVAVVNDTVGTMMTCAYEE 204
|
| >d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 229 bits (585), Expect = 1e-73
Identities = 74/192 (38%), Positives = 115/192 (59%), Gaps = 8/192 (4%)
Query: 50 LRNVADAMTADMRAGLVVDG--GGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L ++ +M+ GL D +KM+ ++V ++P G+E+G F ALDLGG++FR+LRV
Sbjct: 21 LIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRV 80
Query: 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167
Q+ ++ + E E P+ ++ G+ +LFD +A L F EK + ++ +
Sbjct: 81 QVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEK-----RKIKDKKLPV 135
Query: 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDT 226
GFTFSFP +Q+ ID +LI WTK F SG G DVV LN+A++++G D + A+VNDT
Sbjct: 136 GFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDT 195
Query: 227 VGTLAGARYWDE 238
VGT+ Y D+
Sbjct: 196 VGTMMTCGYDDQ 207
|
| >d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Score = 227 bits (580), Expect = 7e-73
Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 7/207 (3%)
Query: 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL 91
+ + +K P L+ V +++ GL GG + MI +V PTG E G
Sbjct: 6 LMQQIENFEKIFTVPTETLQAVTKHFISELEKGLSKKGG-NIPMIPGWVMDFPTGKESGD 64
Query: 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELM-CGTSEELFDFIATGLAKFA 150
F A+DLGGTN RV+ V+LGG +R T + +P + +EL++FIA L F
Sbjct: 65 FLAIDLGGTNLRVVLVKLGG--DRTFDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFI 122
Query: 151 EKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAM 210
+++ F +GFTFSFP Q I+ G+L +WTKGF + DVV L + +
Sbjct: 123 DEQ---FPQGISEPIPLGFTFSFPASQNKINEGILQRWTKGFDIPNIENHDVVPMLQKQI 179
Query: 211 ERQGLDMRVSALVNDTVGTLAGARYWD 237
++ + + V AL+NDT GTL + Y D
Sbjct: 180 TKRNIPIEVVALINDTTGTLVASYYTD 206
|
| >d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 1e-04
Identities = 30/253 (11%), Positives = 64/253 (25%), Gaps = 47/253 (18%)
Query: 242 VAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASI 301
V +I GTG+N + +P G WG D S
Sbjct: 4 VVLISGTGSNCRLI-------------NPDGSESGCGGWGHMM-----------GDEGS- 38
Query: 302 NPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDY 361
++ +++ + + + +
Sbjct: 39 ------------AYWIAHQAVKIVFD-SIDNLEAAPHDIGYVKQAMFHY--FQVPDRLGI 83
Query: 362 SEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGA 421
L + + + I ++ G + G IV++L +ID
Sbjct: 84 LTHLYRDFDKCRFAGFCRKIAEGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPV--LF 141
Query: 422 IFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLG---TEISKNVVIEHTKDGSGIGAALL 478
+ G +++ + + A+T+ + + + S +G A L
Sbjct: 142 QGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASL 201
Query: 479 A--SANSKFDHDY 489
DY
Sbjct: 202 GARHIGHLLPMDY 214
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 489 | |||
| d1ig8a2 | 262 | Hexokinase {Baker's yeast (Saccharomyces cerevisia | 100.0 | |
| d1bdga2 | 237 | Hexokinase {Blood fluke (Schistosoma mansoni) [Tax | 100.0 | |
| d1czan4 | 243 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1bdga1 | 208 | Hexokinase {Blood fluke (Schistosoma mansoni) [Tax | 100.0 | |
| d1czan3 | 205 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1v4sa2 | 243 | Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1czan2 | 243 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1ig8a1 | 207 | Hexokinase {Baker's yeast (Saccharomyces cerevisia | 100.0 | |
| d1czan1 | 207 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1v4sa1 | 205 | Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sz2a1 | 319 | Glucokinase Glk {Escherichia coli [TaxId: 562]} | 99.79 | |
| d1z05a2 | 197 | Transcriptional regulator VC2007 {Vibrio cholerae | 99.77 | |
| d1z6ra3 | 196 | Mlc protein {Escherichia coli [TaxId: 562]} | 99.7 | |
| d2ap1a1 | 186 | Putative regulator protein YcfX {Salmonella typhim | 99.67 | |
| d2gupa2 | 175 | Hypothetical protein SP2142 {Streptococcus pneumon | 99.64 | |
| d2ap1a2 | 117 | Putative regulator protein YcfX {Salmonella typhim | 99.64 | |
| d2aa4a2 | 170 | N-acetylmannosamine kinase NanK {Escherichia coli | 99.6 | |
| d2hoea2 | 169 | N-acetylglucosamine kinase {Thermotoga maritima [T | 99.57 | |
| d2aa4a1 | 119 | N-acetylmannosamine kinase NanK {Escherichia coli | 99.55 | |
| d1woqa1 | 129 | Inorganic polyphosphate/ATP-glucomannokinase PPGMK | 99.54 | |
| d2gupa1 | 114 | Hypothetical protein SP2142 {Streptococcus pneumon | 99.53 | |
| d2hoea3 | 128 | N-acetylglucosamine kinase {Thermotoga maritima [T | 99.53 | |
| d1z6ra2 | 129 | Mlc protein {Escherichia coli [TaxId: 562]} | 99.52 | |
| d1z05a3 | 128 | Transcriptional regulator VC2007 {Vibrio cholerae | 99.48 | |
| d1xc3a1 | 118 | Putative fructokinase YhdR {Bacillus subtilis [Tax | 99.45 | |
| d1xc3a2 | 176 | Putative fructokinase YhdR {Bacillus subtilis [Tax | 99.4 | |
| d1woqa2 | 124 | Inorganic polyphosphate/ATP-glucomannokinase PPGMK | 99.3 | |
| d2ewsa1 | 267 | Type II pantothenate kinase, CoaW {Staphylococcus | 99.24 | |
| d1q18a1 | 110 | Glucokinase Glk {Escherichia coli [TaxId: 562]} | 99.06 | |
| d1huxa_ | 259 | Hydroxyglutaryl-CoA dehydratase component A {Acida | 98.93 | |
| d2ch5a1 | 227 | N-acetylglucosamine kinase, NAGK {Human (Homo sapi | 98.8 | |
| d1zc6a1 | 114 | Probable N-acetylglucosamine kinase CV2896 {Chromo | 98.78 | |
| d2ch5a2 | 117 | N-acetylglucosamine kinase, NAGK {Human (Homo sapi | 98.22 | |
| d2p3ra1 | 252 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 97.31 | |
| d1zc6a2 | 171 | Probable N-acetylglucosamine kinase CV2896 {Chromo | 96.66 | |
| d1r59o1 | 252 | Glycerol kinase {Enterococcus casseliflavus [TaxId | 96.31 | |
| d1zxoa2 | 174 | Hypothetical protein BT3618 {Bacteroides thetaiota | 94.88 | |
| d1zbsa2 | 107 | Hypothetical protein PG1100 {Porphyromonas gingiva | 94.82 | |
| d1zbsa1 | 176 | Hypothetical protein PG1100 {Porphyromonas gingiva | 94.1 | |
| d1bupa1 | 185 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 92.93 | |
| d1iv0a_ | 98 | Hypothetical protein, YqgF homologue {Thermus ther | 84.43 | |
| d1nu0a_ | 138 | Hypothetical protein YqgF (RuvX) {Escherichia coli | 84.37 |
| >d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Probab=100.00 E-value=2.8e-58 Score=448.66 Aligned_cols=240 Identities=34% Similarity=0.549 Sum_probs=222.6
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCc----CCCCCeeeecccccc-cC--CCcccccccccccccCCcchhhhhhh
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNK----SPSGRTIINTEWGAF-SK--GLPLTEFDRDMDAASINPGEQIYEKT 311 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~----~~~g~miIn~E~G~f-~~--~lp~t~~D~~~D~~s~~pg~~~~Ek~ 311 (489)
++.||+|+|||+|+||+|+.++|+++++.. +..++|+||||||+| ++ .+|+|+||..+|+.|.|||+|+||||
T Consensus 1 dt~iGlIlGTG~NacY~e~~~~i~k~~~~~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~~Pg~Q~fEKm 80 (262)
T d1ig8a2 1 ETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPGQQTFEKM 80 (262)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCGGGTTCSCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSSHHHHH
T ss_pred CcEEEEEEeCcEEEEEEEEhhcCccccCcccccCCCCCcEEEEeeeccCCCCCccCCCChhhHHHhhcCCCCCCceeeee
Confidence 578999999999999999999999998753 346899999999999 33 37999999999999999999999999
Q ss_pred hchhhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeee
Q 011283 312 ISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEV 391 (489)
Q Consensus 312 ~SG~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~i 391 (489)
+||+|||||+|+++.++++++.||.+..|+.|.++|+|+|++++.|+.|++++++.+.+++.+.++++++.+|++++|+|
T Consensus 81 iSG~YLGElvRlvl~~l~~~~~lF~~~~~~~L~~~~~l~t~~ls~i~~d~~~~~~~~~~~l~~~~~~~~t~~d~~~vr~i 160 (262)
T d1ig8a2 81 SSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGINTTVQERKLIRRL 160 (262)
T ss_dssp HCGGGHHHHHHHHHHHHHHTTSSSTTCCCTTTSSTTSSCTHHHHHHHHCCSTTCHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHHHHhccccCCCCcHhhcCCCCccchhHhhhhcCCCccHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcc----cccceEEEec
Q 011283 392 CDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTE----ISKNVVIEHT 467 (489)
Q Consensus 392 a~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~----~~~~v~i~~a 467 (489)
|++|.+|||+|+|++|+|+++++++ ++.+|++|||+|++||.|++.++++++++++.. ...+|+|+++
T Consensus 161 ~~~V~~RaA~L~Aa~iaai~~~~~~--------~~~~VavDGSv~~~~p~f~~~~~~~l~~l~~~~~~~~~~~~v~l~~a 232 (262)
T d1ig8a2 161 SELIGARAARLSVCGIAAICQKRGY--------KTGHIAADGSVYNRYPGFKEKAANALKDIYGWTQTSLDDYPIKIVPA 232 (262)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTC--------SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC--------CCcEEEEeeeeeecCccHHHHHHHHHHHHhhhhhccCCCceEEEEEc
Confidence 9999999999999999999999987 457899999999999999999999999997532 2347999999
Q ss_pred cCCcchhHHHHhhcccccc
Q 011283 468 KDGSGIGAALLASANSKFD 486 (489)
Q Consensus 468 ~Dgs~iGAA~~aa~~~~~~ 486 (489)
+|||++|||++||+++|+.
T Consensus 233 ~DGSg~GAAl~Aa~a~~~~ 251 (262)
T d1ig8a2 233 EDGSGAGAAVIAALAQKRI 251 (262)
T ss_dssp CCTTTHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHH
Confidence 9999999999999987753
|
| >d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Probab=100.00 E-value=1.3e-57 Score=438.07 Aligned_cols=231 Identities=35% Similarity=0.594 Sum_probs=216.1
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeeccccccc--C--CCcccccccccccccCCcchhhhhhhhch
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS--K--GLPLTEFDRDMDAASINPGEQIYEKTISG 314 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~--~--~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG 314 (489)
+|.||+|+|||+|+||+|+.++|+++++. ..++|+||||||+|. + .+|+|+||..+|+.|.|||+|+||||+||
T Consensus 1 rc~iGlIlGTG~Nacy~e~~~~i~k~~~~--~~~~miIN~EwG~Fg~~~~l~lp~T~~D~~lD~~S~~pg~q~fEkmiSG 78 (237)
T d1bdga2 1 KCAVGLIVGTGTNVAYIEDSSKVELMDGV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSG 78 (237)
T ss_dssp TEEEEEEESSSEEEEEEEETTTCGGGCSC--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSH
T ss_pred CceEEEEEeCCeeEEEEEEhhcCccccCC--CCCcEEEEcccccCCCCCCCCCCCChHhHHHhhcCCCCCcchhhhhhhh
Confidence 48999999999999999999999999873 467899999999993 2 37999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccc-cccccceeeeeehh
Q 011283 315 MYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVE-SSLKARKVVIEVCD 393 (489)
Q Consensus 315 ~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~-~~~~d~~~~~~ia~ 393 (489)
+|||||+|+++.++++++.||.+..|+.+.++++|+|++|+.|+.|+++++..+..++.+.|+++ ++.+|++.++++|+
T Consensus 79 ~YLGEl~Rlil~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~~l~~~~~~~~~~~~d~~~lr~i~~ 158 (237)
T d1bdga2 79 MYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACE 158 (237)
T ss_dssp HHHHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcccccCCCCcHhhcCCCccccHHHHHHHhCCCchHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988886 78899999999999
Q ss_pred hhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcch
Q 011283 394 TIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGI 473 (489)
Q Consensus 394 ~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~i 473 (489)
.|++|||+|+|++|+|++++++. ++++|++|||+|++||.|++.++++++++.++ ..+|+|++++|||++
T Consensus 159 ~V~~RaA~L~Aa~iaai~~~~~~--------~~~~Vg~dGS~~~~~p~y~~~l~~~l~~l~~~--~~~i~l~~a~DGSg~ 228 (237)
T d1bdga2 159 MVVKRAAYLAGAGIACILRRINR--------SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPK--NTRFCLRLSEDGSGK 228 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC--------SEEEEEEESHHHHHCTTHHHHHHHHHHHHSCT--TCEEEEEECTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC--------CceEEEEeCchhhcChhHHHHHHHHHHHHcCC--CceEEEEEccCCcHH
Confidence 99999999999999999999987 46789999999999999999999999998765 357999999999999
Q ss_pred hHHHHhhc
Q 011283 474 GAALLASA 481 (489)
Q Consensus 474 GAA~~aa~ 481 (489)
|||++||.
T Consensus 229 GAAl~AA~ 236 (237)
T d1bdga2 229 GAAAIAAS 236 (237)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 99999874
|
| >d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-57 Score=440.17 Aligned_cols=238 Identities=36% Similarity=0.608 Sum_probs=215.7
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccc-c-C--CCcccccccccccccCCcchhhhhhhhch
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAF-S-K--GLPLTEFDRDMDAASINPGEQIYEKTISG 314 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f-~-~--~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG 314 (489)
.|.||+|||||+|+||+|+.++|+++++ +.++|+||||||+| . + .+|+|+||..+|+.|.|||+|+||||+||
T Consensus 1 tc~IGlIlGTGtNacY~e~~~~i~k~~~---~~~~miIN~EwG~Fg~~~~l~~~~T~~D~~lD~~S~~pg~q~fEKmiSG 77 (243)
T d1czan4 1 TCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISG 77 (243)
T ss_dssp TEEEEEEESSSEEEEEEEETTTCTTSSC---CSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTST
T ss_pred CceEEEEEeCCceEEEEEEcccCccccC---CCCcEEEEeeecCCCCCCccccccCHHhHHhhhcCCCCccchHHHHHcc
Confidence 4899999999999999999999999986 56889999999999 2 2 35899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhh
Q 011283 315 MYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDT 394 (489)
Q Consensus 315 ~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~ 394 (489)
+|||||+|++++++++++.||.+..|+.+..+|+|+|++|+.|+.|.++.. .++.+++. ++++++.+|++++++||+.
T Consensus 78 ~YLGElvRlil~~l~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~-~~~~i~~~-~~~~~s~~d~~~lr~i~~~ 155 (243)
T d1czan4 78 MYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALL-QVRAILQQ-LGLNSTCDDSILVKTVCGV 155 (243)
T ss_dssp TTHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSCCHH-HHHHHHHH-HTCCCCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcccccCCCCcHHHcCCCCcccHHHHHHHcCCchHH-HHHHHHHH-hCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987765 46777765 8998899999999999999
Q ss_pred hhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchh
Q 011283 395 IVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIG 474 (489)
Q Consensus 395 V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iG 474 (489)
|++|||+|+|++|+|+++++++.... ..+.++|++|||+|++||.|++.++++++++.+. .+|+|++++|||++|
T Consensus 156 V~~RAA~L~Aa~iaail~~~~~~~~~--~~~~~~V~~dGSv~~~~p~f~~~~~~~l~~l~~~---~~i~l~~~~DGSg~G 230 (243)
T d1czan4 156 VSRRAAQLCGAGMAAVVDKIRENRGL--DRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPK---CNVSFLLSEDGSGKG 230 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC--SSEEEEEEEECHHHHHCTTHHHHHHHHHHHHSTT---EEEEEEECSSCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCC--CCCccEEEEECcceecCchHHHHHHHHHHHhCCC---CcEEEEEccCccHHH
Confidence 99999999999999999999764321 1235789999999999999999999999998643 579999999999999
Q ss_pred HHHHhhcccccc
Q 011283 475 AALLASANSKFD 486 (489)
Q Consensus 475 AA~~aa~~~~~~ 486 (489)
||++||+++|.+
T Consensus 231 AAl~Aa~a~r~~ 242 (243)
T d1czan4 231 AALITAVGVRLR 242 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999998865
|
| >d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Probab=100.00 E-value=1e-56 Score=419.97 Aligned_cols=201 Identities=38% Similarity=0.635 Sum_probs=180.7
Q ss_pred chhhHHHHHhhhcCChhHHHHHHHHHhHhhhcccccc--CCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEe
Q 011283 32 VAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVD--GGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQL 109 (489)
Q Consensus 32 ~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l 109 (489)
+.+-++++.++|.++.++|++|+++|++||++||+++ ..|+++||||||+++|+|+|+|.|||||+|||||||++|++
T Consensus 6 ~~~~v~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~l~Mlpt~v~~lPtG~E~G~fLalDlGGTn~Rv~~V~L 85 (208)
T d1bdga1 6 LFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVTL 85 (208)
T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEE
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhcCCCCCccceeccccCCCCCCCccceEEEEEecCceEEEEEEEe
Confidence 4455667777888999999999999999999999753 35899999999999999999999999999999999999999
Q ss_pred CCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeec
Q 011283 110 GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWT 189 (489)
Q Consensus 110 ~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wt 189 (489)
.|++. .....++.|+||.+++.+++++||||||+||.+|+++++.. +..+++|||||||++|+++++|+|++||
T Consensus 86 ~g~~~-~~~~~~~~~~ip~~~~~~~~~~lFd~iA~~i~~fl~~~~~~-----~~~l~lGfTFSFP~~Q~s~~~g~Li~wt 159 (208)
T d1bdga1 86 EGKGK-SPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATLVRWT 159 (208)
T ss_dssp CC-CC-CCEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEECCCC
T ss_pred cCCCc-ceEEEEEEeeCCHHHccCCHHHHHHHHHHHHHHHHHhcCCC-----CCccccEEEEcCccccCCCCcEEEEecc
Confidence 76432 22223347999999999999999999999999999987642 5679999999999999999999999999
Q ss_pred cceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccC
Q 011283 190 KGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238 (489)
Q Consensus 190 Kgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~ 238 (489)
|||++++++|+||+++|++||+|++++|+|+||+|||||||++++|.+|
T Consensus 160 KgF~~~gv~g~dv~~lL~~al~r~~~~v~v~aivNDTvgTL~a~ay~dP 208 (208)
T d1bdga1 160 KGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDP 208 (208)
T ss_dssp TTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCT
T ss_pred ccccCCCccCCcHHHHHHHHHHhcCCCceEEEEEEccHHHHHhhhccCC
Confidence 9999999999999999999999999999999999999999999999865
|
| >d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-56 Score=419.47 Aligned_cols=200 Identities=41% Similarity=0.649 Sum_probs=181.9
Q ss_pred hhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccC--CCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEeCC
Q 011283 34 PILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDG--GGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGG 111 (489)
Q Consensus 34 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~g 111 (489)
+-++++.++|.++.++|++|+++|++||++||+++. .|+++||||||+++|+|+|+|.|||||+|||||||++|++.|
T Consensus 3 ~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~l~Mlpt~v~~lPtG~E~G~fLalDlGGTn~Rv~~V~L~g 82 (205)
T d1czan3 3 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 82 (205)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccCCCCCCCccceEEEEEecCceEEEEEEEecC
Confidence 345666677889999999999999999999998642 578999999999999999999999999999999999999976
Q ss_pred ccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeeccc
Q 011283 112 QEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKG 191 (489)
Q Consensus 112 ~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtKg 191 (489)
++.++....+++|+||.+++++++++||||||++|.+|+++++.. .+.+++|||||||++|+++++|+|++||||
T Consensus 83 ~~~~~~~~~~~~~~ip~~~~~~~~~eLFd~iA~~i~~fl~~~~~~-----~~~~~lGfTFSFP~~Q~s~~~g~Li~wtKg 157 (205)
T d1czan3 83 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 157 (205)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CCCceEEEEeeeecCCHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccceEEEeceeeccCCCcEEEEEeeCc
Confidence 654555555668999999999999999999999999999987642 567999999999999999999999999999
Q ss_pred eeeecCCCchHHHHHHHHHHhc-CcceEeeeeeccccccccccccccC
Q 011283 192 FSVSGTAGKDVVACLNEAMERQ-GLDMRVSALVNDTVGTLAGARYWDE 238 (489)
Q Consensus 192 f~~~~~~G~dv~~lL~~al~~~-~l~v~v~ai~NDtvatlla~~~~~~ 238 (489)
|++++++|+||+++|++|++|+ +++|+|+||+|||||||++++|.+|
T Consensus 158 f~~~~~~g~dv~~lL~~al~~r~~~~v~v~aivNDTvgTL~s~ay~dP 205 (205)
T d1czan3 158 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEP 205 (205)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCT
T ss_pred eecCCcccchHHHHHHHHHHhcCCCCceEEEEEEhhHHHHHhhccCCC
Confidence 9999999999999999999977 7899999999999999999999875
|
| >d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-57 Score=435.71 Aligned_cols=237 Identities=32% Similarity=0.586 Sum_probs=213.7
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeeccccccc--C--CCcccccccccccccCCcchhhhhhhhch
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS--K--GLPLTEFDRDMDAASINPGEQIYEKTISG 314 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~--~--~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG 314 (489)
+|.||+|+|||+|+||+|+.++|+++++ ..++|+||||||+|. . .+|+|+||..+|+.|.|||+|+||||+||
T Consensus 1 ~c~iGlIlGTG~Nacy~e~~~~i~k~~~---~~~~miINtEwG~fg~~~~l~~~~T~~D~~lD~~s~~Pg~q~fEKmiSG 77 (243)
T d1v4sa2 1 QCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGG 77 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCTTSSC---CSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCHHHHHHCT
T ss_pred CceEEEEEeCCeEEEEEEEcccCcccCC---CCCcEEEEccccccCCCCCCccCcCHHHHHHHhCCCCCCccchhHhHhh
Confidence 4899999999999999999999999986 458999999999993 2 35799999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhh
Q 011283 315 MYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDT 394 (489)
Q Consensus 315 ~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~ 394 (489)
+|||||+|++++++++++.||.+..|+.+..+|+|+|++|+.|+.|.++.. ....++.. ++++++.+|++.+|+||++
T Consensus 78 ~YLGElvRlil~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~-~~~~~l~~-~~~~~s~~d~~~lr~i~~~ 155 (243)
T d1v4sa2 78 KYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRK-QIYNILST-LGLRPSTTDCDIVRRACES 155 (243)
T ss_dssp TTHHHHHHHHHHHHHHTTCSGGGCCCTGGGSTTCSCHHHHHHHTTCCSSSH-HHHHHHHH-TTCCCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcccccCCCCcHHhcCCCCcccHHHHHHhcCCccHH-HHHHHHHh-cCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998875543 45566654 8888889999999999999
Q ss_pred hhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchh
Q 011283 395 IVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIG 474 (489)
Q Consensus 395 V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iG 474 (489)
|++|||+|+|++|+|+++++++..+. ...+++|++|||||++||.|++.++++++++++. .+|+|++++|||++|
T Consensus 156 v~~RaA~L~Aa~i~ail~~~~~~~~~--~~~~~~V~~dGSv~~~~p~y~~~l~~~l~~l~~~---~~i~l~~~~DgSg~G 230 (243)
T d1v4sa2 156 VSTRAAHMCSAGLAGVINRMRESRSE--DVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS---CEITFIESEEGSGRG 230 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCS--SSEEEEEEEECHHHHHSTTHHHHHHHHHHHHCTT---EEEEEEECSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCC--CCcceEEEecchhhhcCchHHHHHHHHHHHhCCC---CcEEEEECCCccHHH
Confidence 99999999999999999999875331 1246899999999999999999999999998753 579999999999999
Q ss_pred HHHHhhccccc
Q 011283 475 AALLASANSKF 485 (489)
Q Consensus 475 AA~~aa~~~~~ 485 (489)
||++||+++|.
T Consensus 231 AAl~Aa~a~~~ 241 (243)
T d1v4sa2 231 AALVSAVACKK 241 (243)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999998874
|
| >d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-57 Score=435.80 Aligned_cols=238 Identities=38% Similarity=0.619 Sum_probs=214.7
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeeccccccc--C--CCcccccccccccccCCcchhhhhhhhch
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS--K--GLPLTEFDRDMDAASINPGEQIYEKTISG 314 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~--~--~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG 314 (489)
+|.||+|+|||+|+||+|+.++|+++++ ..++|+||||||.|. . .+|+|+||..+|+.|.|||+|+||||+||
T Consensus 1 ~c~iGlIlGTGtNacy~e~~~~i~~~~~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~Pg~q~fEKmiSG 77 (243)
T d1czan2 1 HCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSG 77 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCTTSSC---CSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSH
T ss_pred CceEEEEEeCCceEEEEeEcccCCcccC---CCCcEEEEeccccCCCCCcccccCChHHHHHhhcCCCCCCcchhhhhcc
Confidence 5899999999999999999999999885 457899999999993 2 24789999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhh
Q 011283 315 MYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDT 394 (489)
Q Consensus 315 ~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~ 394 (489)
+|||||+|+++.++++++.||++..++.+.++++|+|++++.++.|+ ++...++.+++. ++++++.+|+..+++||++
T Consensus 78 ~YLGElvRlvl~~l~~~~~lF~~~~~~~l~~~~~l~t~~~s~i~~d~-~~~~~~~~il~~-~~~~~s~~d~~~lr~i~~~ 155 (243)
T d1czan2 78 MYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNK-EGLHNAKEILTR-LGVEPSDDDCVSVQHVCTI 155 (243)
T ss_dssp HHHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSSCHHHHHHHTCTT-THHHHHHHHHHH-TTCCCCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcccccCCCCCHHHcCCCCcCchHHHHHhcCC-hhHHHHHHHHHH-cCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999885 456678888875 8988889999999999999
Q ss_pred hhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCCcchh
Q 011283 395 IVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDGSGIG 474 (489)
Q Consensus 395 V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dgs~iG 474 (489)
|++|||+|+|++|+|++++++..... ...+++|++|||+|++||.|++.++++++++++. .+|++++++|||++|
T Consensus 156 v~~RAA~L~Aa~iaail~~~~~~~~~--~~~~~~Va~dGSv~~~~p~f~~~~~~~l~~l~~~---~~v~~~~~~DGSg~G 230 (243)
T d1czan2 156 VSFRSANLVAATLGAILNRLRDNKGT--PRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGKG 230 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC--SSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTT---EEEEEEECTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCC--CCcceEEEEechhhhhCchHHHHHHHHHHHHCCC---CceEEEEccCCcHHH
Confidence 99999999999999999999753211 1245789999999999999999999999998864 479999999999999
Q ss_pred HHHHhhcccccc
Q 011283 475 AALLASANSKFD 486 (489)
Q Consensus 475 AA~~aa~~~~~~ 486 (489)
||++||++.|..
T Consensus 231 AAl~Aa~a~r~~ 242 (243)
T d1czan2 231 AAMVTAVAYRLA 242 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999998863
|
| >d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Probab=100.00 E-value=5.8e-56 Score=415.40 Aligned_cols=205 Identities=34% Similarity=0.623 Sum_probs=184.1
Q ss_pred CcccchhhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccCCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEE
Q 011283 28 VNVSVAPILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107 (489)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV 107 (489)
.++++.+.+++++++|.+|.++|++|+++|++||++||++++ ++++||||||+++|+|+|+|.|||||+|||||||++|
T Consensus 2 ~p~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~v~~lPtG~E~G~flalDlGGTnlRv~~V 80 (207)
T d1ig8a1 2 VPKELMQQIENFEKIFTVPTETLQAVTKHFISELEKGLSKKG-GNIPMIPGWVMDFPTGKESGDFLAIDLGGTNLRVVLV 80 (207)
T ss_dssp CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSTTC-CSSCCEECCCCSCCCSCCEEEEEEEEECSSEEEEEEE
T ss_pred ccHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHccCC-CCCcceeeccCCCCCCCccceEEEEEecCceEEEEEE
Confidence 356678889999999999999999999999999999998764 7899999999999999999999999999999999999
Q ss_pred EeCCccceeeecccccccccchhh-ccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceee
Q 011283 108 QLGGQEERVQATEFEQVSIPQELM-CGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLI 186 (489)
Q Consensus 108 ~l~g~~~~i~~~~~~~~~ip~~~~-~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li 186 (489)
++.|++.....+ +++++|..++ ..+.++||||||++|.+|++++.... ..+.+++|||||||++|+++++|+|+
T Consensus 81 ~L~g~~~~~~~~--~~~~ip~~~~~~~~~~~lFd~iA~~i~~f~~e~~~~~---~~~~l~lGfTFSFP~~Q~~i~~g~Li 155 (207)
T d1ig8a1 81 KLGGDRTFDTTQ--SKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQFPQG---ISEPIPLGFTFSFPASQNKINEGILQ 155 (207)
T ss_dssp EEESSSCEEEEE--EEEECCTTGGGCSCTHHHHHHHHHHHHHHHHHHCTTC---CCSCEEEEEECCSSEECSBTTCCEEC
T ss_pred EEcCCCceEEee--eeeeCCHHHhcCCcHHHHHHHHHHHHHHHHHHhcccc---cCCcceeEEEEeceeecCCCCcEEEE
Confidence 998764333332 3689998876 35688999999999999999865321 25679999999999999999999999
Q ss_pred eeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccC
Q 011283 187 KWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238 (489)
Q Consensus 187 ~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~ 238 (489)
+|||||++++++|+||+++|++||+|+++||+|+||+|||||||++++|.+|
T Consensus 156 ~wtKgF~~~~~~G~dv~~lL~~al~r~~~~v~v~aivNDTvgtL~a~~y~dP 207 (207)
T d1ig8a1 156 RWTKGFDIPNIENHDVVPMLQKQITKRNIPIEVVALINDTTGTLVASYYTDP 207 (207)
T ss_dssp CCCTTCCCTTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCT
T ss_pred eeeccccccCcCCCcHHHHHHHHHHHcCCCceEEEEEEhhHHHHHhhccCCC
Confidence 9999999999999999999999999999999999999999999999999875
|
| >d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-56 Score=415.93 Aligned_cols=199 Identities=38% Similarity=0.644 Sum_probs=181.7
Q ss_pred hhHHHHHhhhcCChhHHHHHHHHHhHhhhccccccC--CCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEeCC
Q 011283 34 PILTKLQKECAAPLPVLRNVADAMTADMRAGLVVDG--GGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGG 111 (489)
Q Consensus 34 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~g 111 (489)
+-++++.++|.++.++|++|+++|++||++||+++. .|+++||||||+++|+|+|+|.|||||+|||||||++|++.|
T Consensus 5 ~~v~~~l~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~i~Mlpt~v~~lP~G~E~G~flalDlGGTn~Rv~~V~L~g 84 (207)
T d1czan1 5 KKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNH 84 (207)
T ss_dssp HHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEE
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhcCCCCCcceeeeccccCCCCccccceEEEEecCCceEEEEEEEeCC
Confidence 345777788889999999999999999999998653 478999999999999999999999999999999999999976
Q ss_pred ccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeeccc
Q 011283 112 QEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKG 191 (489)
Q Consensus 112 ~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtKg 191 (489)
++...+.+.+++|++|.+++.+++++||||||+||.+|+++++.. +..+++|||||||++|+++++|+|++||||
T Consensus 85 ~~~~~~~~~~~~~~ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~-----~~~l~lGfTFSFP~~Q~sl~~g~Li~wtKg 159 (207)
T d1czan1 85 EKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITWTKR 159 (207)
T ss_dssp ETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCCCTT
T ss_pred CCCccEEEEEEeecCCHHHhcCCHHHHHHHHHHHHHHHHHhcCcC-----CCCCccEEEEcCeeccCCCCcEEEEecccc
Confidence 554555555567999999999999999999999999999987643 567999999999999999999999999999
Q ss_pred eeeecCCCchHHHHHHHHHHhcC-cceEeeeeecccccccccccccc
Q 011283 192 FSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVGTLAGARYWD 237 (489)
Q Consensus 192 f~~~~~~G~dv~~lL~~al~~~~-l~v~v~ai~NDtvatlla~~~~~ 237 (489)
|++++++|+||+++|++|++|++ +||+|+||+|||||||++++|.+
T Consensus 160 F~~~~v~G~dv~~lL~~al~r~~~~~v~v~aivNDTvgTL~s~aY~D 206 (207)
T d1czan1 160 FKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD 206 (207)
T ss_dssp CCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC
T ss_pred CccCCCCCCcHHHHHHHHHHhcCCCCceEEEEEEchHHHHHHhhccC
Confidence 99999999999999999999986 89999999999999999999975
|
| >d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-55 Score=413.27 Aligned_cols=198 Identities=41% Similarity=0.717 Sum_probs=178.7
Q ss_pred hHHHHHhhhcCChhHHHHHHHHHhHhhhcccccc--CCCCcceeehhcccCcCCCccccEEEEecCCcceEEEEEEeCCc
Q 011283 35 ILTKLQKECAAPLPVLRNVADAMTADMRAGLVVD--GGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQ 112 (489)
Q Consensus 35 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~~~Mlpt~v~~lP~G~E~G~~LaIDlGGTnlRv~lV~l~g~ 112 (489)
+++++.++|.++.++|++|+++|++||++||+.+ ..|+++||||||+++|+|+|+|.|||||+|||||||++|++.++
T Consensus 2 ~v~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~ssl~MlPt~v~~lPtG~E~G~flalDlGGTn~Rv~~V~L~~~ 81 (205)
T d1v4sa1 2 LVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGEG 81 (205)
T ss_dssp HHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESCCCCCCCEEEEEEEESSSEEEEEEEEECCC
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccCCCCcceeeeeecccCCCCcccceEEEEecCCceEEEEEEEeCCC
Confidence 4678888899999999999999999999999754 35789999999999999999999999999999999999999543
Q ss_pred c--ceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEEeeeccccccccceeeeecc
Q 011283 113 E--ERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTK 190 (489)
Q Consensus 113 ~--~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tfSfP~~q~~i~~g~li~wtK 190 (489)
. ....+...++|+||++++++++++||||||+||.+|+++++.. ++.+|+|||||||++|+++++|+|++|||
T Consensus 82 ~~~~~~~~~~~~~~~ip~~~~~~t~~~LFd~iA~~i~~fl~~~~~~-----~~~lplGfTFSFP~~Q~sl~~g~Li~wtK 156 (205)
T d1v4sa1 82 EEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILLNWTK 156 (205)
T ss_dssp SSSCCEEEEEEEEEECCSTTTSSBHHHHHHHHHHHHHHHHHTTTCT-----TCCCEEEEEECSCEEEEETTEEEECCCCT
T ss_pred CCCCceeEEEeecccCChhhccCCHHHHHHHHHHHHHHHHHhhCCC-----CCccccEEEEcCccccCCCCcEEEEEccc
Confidence 2 1233444457999999999999999999999999999987642 56799999999999999999999999999
Q ss_pred ceeeecCCCchHHHHHHHHHHhcC-cceEeeeeecccccccccccccc
Q 011283 191 GFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVGTLAGARYWD 237 (489)
Q Consensus 191 gf~~~~~~G~dv~~lL~~al~~~~-l~v~v~ai~NDtvatlla~~~~~ 237 (489)
||++++++|+||+++|+++++|++ +||+|+||+|||||||++++|.+
T Consensus 157 gf~~~~~~g~dv~~lL~~al~r~~~~~v~v~aivNDTvgTL~s~ay~d 204 (205)
T d1v4sa1 157 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED 204 (205)
T ss_dssp TCCCBTCTTSBHHHHHHHHHTTTCSCCCEEEEEECHHHHHHHHHHTTC
T ss_pred ccccCccccchHHHHHHHHHHhcCCCCceEEEEEEchHHHHHhhhccC
Confidence 999999999999999999999985 89999999999999999999975
|
| >d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glucokinase domain: Glucokinase Glk species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=1.3e-19 Score=178.98 Aligned_cols=295 Identities=12% Similarity=0.075 Sum_probs=170.5
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
+||++|+||||+|+++|+..++ .+...+ .+|+. +.+++ .+.|++++++.+ .+...+||+
T Consensus 2 y~L~~DIGGT~ir~glvd~~~~--~i~~~~----~~~~~----~~~~~----~~~i~~~~~~~~-------~~~~~igI~ 60 (319)
T d1sz2a1 2 YALVGDVGGTNARLALCDIASG--EISQAK----TYSGL----DYPSL----EAVIRVYLEEHK-------VEVKDGCIA 60 (319)
T ss_dssp EEEEEEEETTEEEEEEEETTTC--CEEEEE----EEEGG----GCSCH----HHHHHHHHHHSC-------CCCCEEEEE
T ss_pred EEEEEEEChhheeeEEEECCCC--EEEEEE----EeCCC----CHhHH----HHHHHHHHHhcC-------CCcceEEEE
Confidence 7899999999999999997653 233221 22322 12233 344556665543 245779999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccccc------------ccC
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARY------------WDE 238 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~------------~~~ 238 (489)
+|+|++. +.+.+..+.. ..+....++..+ ..++ .+.||.++....+.+ .+.
T Consensus 61 ~pG~vd~---~~~~~~~~~~--------~~~~~~~~~~~~---~~~v---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (319)
T d1sz2a1 61 IACPITG---DWVAMTNHTW--------AFSIAEMKKNLG---FSHL---EIINDFTAVSMAIPMLKKEHLIQFGGAEPV 123 (319)
T ss_dssp ESSCCCS---SEECCSSSCC--------CEEHHHHHHHHT---CSEE---EEEEHHHHHHHHGGGCCGGGEEECSSCCCC
T ss_pred cccCCCC---Cccccccccc--------ccChHHHHHhhc---ccce---eecceeeeeehhhhhhhhhhHHhhCcccCC
Confidence 9999985 3344433221 124445544433 3344 677777766665442 356
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHH
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLG 318 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLg 318 (489)
++.+.+++|||++++.+.....+.+..+.++|.||+.+...+.... +...+ ...|+. .+|+|.++||++|-
T Consensus 124 ~~~~~~~i~~g~G~g~~~~~~~~~g~~~~agE~G~~~~~~~~~~~~---~~~~~----~~~~g~--~g~~E~~~Sg~~l~ 194 (319)
T d1sz2a1 124 EGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEA---IILEI----LRAEIG--HVSAERVLSGPGLV 194 (319)
T ss_dssp TTCCEEEEEESSSEEEEEEEEETTEEEEEECCGGGSBCCCCSHHHH---HHHHH----HHHHSS--SCBGGGTSSHHHHH
T ss_pred CcceEEEEcccccceEEEEecccCCcccccccccccccCCcchhhc---cchhh----hhhcCC--cceeeeeccchhHH
Confidence 6778889999999999888887777766667777776654322110 00000 013455 47999999999997
Q ss_pred HHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhc
Q 011283 319 EIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKR 398 (489)
Q Consensus 319 ei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~R 398 (489)
++.+..... .+. +.... .+.+....... ..+..|+.+.++
T Consensus 195 ~~~~~~~~~---~~~------~~~~~------------------~~~~~~~~~~~-------------~~~~~~~~~~~~ 234 (319)
T d1sz2a1 195 NLYRAIVKA---DNR------LPENL------------------KPKDITERALA-------------DSCTDCRRALSL 234 (319)
T ss_dssp HHHHHHHHH---TTC------CCCCC------------------CHHHHHHHHHH-------------TCCHHHHHHHHH
T ss_pred HHHHHHHhh---cCC------Cchhc------------------cchHHHHHHhh-------------cchHHHHHHHHH
Confidence 766653321 110 00000 00011111111 123678888999
Q ss_pred CCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhH-HHH-HHHHHHHHh-hCcccc--cceEEEeccCCcch
Q 011283 399 GGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQ-YRR-YVHEAVTEL-LGTEIS--KNVVIEHTKDGSGI 473 (489)
Q Consensus 399 aA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~-f~~-~i~~~l~~~-~~~~~~--~~v~i~~a~Dgs~i 473 (489)
.+.+++..++.++..+.+. ..|+++||+...... |.+ .+.+.+... ..+... -.|.+...+|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~---------~~ivigGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~dagl~ 305 (319)
T d1sz2a1 235 FCVIMGRFGGNLALNLGTF---------GGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLL 305 (319)
T ss_dssp HHHHHHHHHHHHHHHHTCT---------TEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHH
T ss_pred HHHHHHHHHHhhhheecCC---------CCcEEecchhhhhhhhhchHHHHHHHHhccchhhHhhCCcEEEEECCchhHH
Confidence 9998888877777766651 247778888876543 332 223333221 111111 13445566999999
Q ss_pred hHHHHhhc
Q 011283 474 GAALLASA 481 (489)
Q Consensus 474 GAA~~aa~ 481 (489)
|||..|..
T Consensus 306 GAa~~a~~ 313 (319)
T d1sz2a1 306 GSGAHLRQ 313 (319)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987654
|
| >d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Transcriptional regulator VC2007 species: Vibrio cholerae [TaxId: 666]
Probab=99.77 E-value=3.1e-19 Score=165.14 Aligned_cols=179 Identities=16% Similarity=0.161 Sum_probs=136.4
Q ss_pred cCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhh
Q 011283 237 DEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMY 316 (489)
Q Consensus 237 ~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~y 316 (489)
+.++++.+++|||++++++.+++.+++.++.++|.|||.|+.+ |..| .|++. +|+|.++|+..
T Consensus 1 d~~n~v~i~igtGiG~giv~~g~l~~G~~g~AGEiGh~~v~~~-g~~c--------------~cG~~--GclE~~~S~~a 63 (197)
T d1z05a2 1 DVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQ-GKRC--------------HCGNY--GCLETVASSQA 63 (197)
T ss_dssp TCSSEEEEEESSSEEEEEEETTEECCTTTTCTTBCTTSBCCTT-CCBC--------------TTSCB--SBTHHHHSHHH
T ss_pred CCccEEEEEECCCEEEEEEECCEEEeCCCCCCcccccCccccc-cccc--------------cCCCC--CchHHHhcHHH
Confidence 3578999999999999999999999999999999999999865 4333 46774 79999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhh
Q 011283 317 LGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIV 396 (489)
Q Consensus 317 Lgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~ 396 (489)
|.+.++..+. .. .++.+.....+ ...++++. ++..++.|+.++
T Consensus 64 l~~~~~~~~~---~~-------~~~~~~~~~~~-----------------~~~~l~~~----------a~~gd~~a~~~~ 106 (197)
T d1z05a2 64 IRDQVTARIQ---AG-------EPSCLATVEEI-----------------SIEDICAA----------AADGDPLAVDVI 106 (197)
T ss_dssp HHHHHHHHHH---TT-------CCCTTTTCSSC-----------------CHHHHHHH----------HHTTCHHHHHHH
T ss_pred HHHHHHHHHh---cC-------Cccccccchhc-----------------CHHHHHHH----------HHcCCHHHHHHH
Confidence 9665554321 11 01111111111 12234443 333458999999
Q ss_pred hcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcch
Q 011283 397 KRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGI 473 (489)
Q Consensus 397 ~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~i 473 (489)
+++++++|.+|+++++.++| + .|++||++....+.|.+.+++.+++...+.....++|+.+ +|++++
T Consensus 107 ~~~~~~la~~i~nl~~~ldP--------~--~IviGG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~I~~s~lg~~a~~~ 176 (197)
T d1z05a2 107 QQLGRYLGAAIAIVINLFNP--------E--KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQATMP 176 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSCTTHH
T ss_pred HHHHHHHHHHHHhHHHhcCC--------C--EEEEecchHHhhHHHHHHHHHHHHHhcccccCCCCEEEECCCCCcHHHH
Confidence 99999999999999999998 3 5889999999999999999999998765444456778776 799999
Q ss_pred hHHHHh
Q 011283 474 GAALLA 479 (489)
Q Consensus 474 GAA~~a 479 (489)
|||+++
T Consensus 177 GAA~l~ 182 (197)
T d1z05a2 177 GAALIK 182 (197)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999876
|
| >d1z6ra3 c.55.1.10 (A:211-406) Mlc protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Mlc protein species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=1.5e-17 Score=153.43 Aligned_cols=177 Identities=14% Similarity=0.108 Sum_probs=133.5
Q ss_pred cCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhh
Q 011283 237 DEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMY 316 (489)
Q Consensus 237 ~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~y 316 (489)
+.++++.+++|||++++++.+++.+++.++.++|.|||.|+.+ |..| .|++. +|+|.++|+.+
T Consensus 1 G~~n~~~i~ig~GiG~gii~ng~l~~G~~g~aGEiGh~~v~~~-g~~c--------------~cG~~--gcle~~~s~~a 63 (196)
T d1z6ra3 1 GARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPY-GKRC--------------YCGNH--GCLETIASVDS 63 (196)
T ss_dssp TCSSEEEEEESSSEEEEEEETTEETTTTSSCCBCGGGSBSCTT-SCBC--------------TTSCB--SBTHHHHSHHH
T ss_pred CCceEEEEEECCCeEEEEEECCEEEECCCCCCccccccccccc-cccc--------------ccccc--chHHHhcCHHH
Confidence 3578999999999999999999999999999999999999865 4443 36664 79999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhh
Q 011283 317 LGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIV 396 (489)
Q Consensus 317 Lgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~ 396 (489)
|.+.++... .+. ..+.+.. + ..+ ..++++. ++..++.+..++
T Consensus 64 l~~~~~~~~---~~~-------~~~~l~~------~---------~~~---~~~~~~~----------~~~gd~~a~~i~ 105 (196)
T d1z6ra3 64 ILELAQLRL---NQS-------MSSMLHG------Q---------PLT---VDSLCQA----------ALRGDLLAKDII 105 (196)
T ss_dssp HHHHHHHHH---TTC-------TTCGGGS------S---------CCC---HHHHHHH----------HHTTCHHHHHHH
T ss_pred HHHHHHHhh---ccc-------cchhccC------C---------cCC---HHHHHHH----------HHccCHHHHHHH
Confidence 966554321 110 0011100 0 001 1223332 333458999999
Q ss_pred hcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcch
Q 011283 397 KRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGI 473 (489)
Q Consensus 397 ~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~i 473 (489)
+++++.+|.+|+++++.++| + .|+++|++.+..+.|.+.+++.+++.+.+.....++|+.+ +|++++
T Consensus 106 ~~~~~~la~~i~~l~~~ldP--------~--~IvigG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~~s~l~~~a~~~ 175 (196)
T d1z6ra3 106 TGVGAHVGRILAIMVNLFNP--------Q--KILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMA 175 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTT
T ss_pred HHHHHHHHHHHHHHHHHhCC--------C--EEEEecchhhhhHHHHHHHHHHHHHhcccccCCCcEEEECCCCChHHHH
Confidence 99999999999999999998 3 5999999999999999999999988765544456777765 799999
Q ss_pred hHHHH
Q 011283 474 GAALL 478 (489)
Q Consensus 474 GAA~~ 478 (489)
|||++
T Consensus 176 GAAll 180 (196)
T d1z6ra3 176 GAALV 180 (196)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
|
| >d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative regulator protein YcfX species: Salmonella typhimurium [TaxId: 90371]
Probab=99.67 E-value=8.7e-18 Score=153.34 Aligned_cols=180 Identities=18% Similarity=0.142 Sum_probs=129.7
Q ss_pred cccCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhch
Q 011283 235 YWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISG 314 (489)
Q Consensus 235 ~~~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG 314 (489)
|+++++++++++|||++++++.+++.+++.++.++|.|||.++........ .... .....|++ .+|+|.++|+
T Consensus 2 ~~~y~~v~~l~~GtGiG~giv~nG~l~~G~~g~AGEiGh~~v~~~~~~~~~-~~~~----~~~c~cg~--~gc~e~~~s~ 74 (186)
T d2ap1a1 2 FTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMG-FDFP----LRRCGCGQ--MGCIENYLSG 74 (186)
T ss_dssp GGGCSEEEEEEESSSEEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHC-TTSC----CCBCTTSC--BSBTHHHHSH
T ss_pred CCCCCEEEEEEEccCeEEEEEECCEEEeCCCCCCceeEEEEECCCCccccc-cccc----ccccccCc--hhhHHhhhhh
Confidence 678899999999999999999999999999999999999999755221100 0000 00124666 4799999999
Q ss_pred hhHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhh
Q 011283 315 MYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDT 394 (489)
Q Consensus 315 ~yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~ 394 (489)
..+.+...... . . .++ ...+++. ++..++.++.
T Consensus 75 ~~~~~~~~~~~---~-----------~------~~~-----------------~~~~~~~----------~~~gd~~a~~ 107 (186)
T d2ap1a1 75 RGFAWLYQHYY---D-----------Q------SLQ-----------------APEIIAL----------WEQGDEQAHA 107 (186)
T ss_dssp HHHHHHHHHHH---C-----------C------CCC-----------------HHHHHHH----------HHTTCHHHHH
T ss_pred hhHHHHhhhcc---c-----------c------ccc-----------------hhhHHHH----------HHhccchHHH
Confidence 98844333210 0 0 001 1112222 2234488999
Q ss_pred hhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCc
Q 011283 395 IVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGS 471 (489)
Q Consensus 395 V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs 471 (489)
+++++++++|.+|+++++.++| + .|++||++... +.|.+.+++.+++.+.+.. ..++|+.+ +|++
T Consensus 108 i~~~~~~~la~~i~nl~~~ldP--------e--~IvlGG~i~~~-~~~~~~l~~~~~~~~~~~~-~~~~I~~s~lg~~a~ 175 (186)
T d2ap1a1 108 HVERYLDLLAVCLGNILTIVDP--------D--LLVIGGGLSNF-TAITTQLAERLPRHLLPVA-RAPRIERARHGDAGG 175 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGS-THHHHSSGGGSGGGSCTTC-CCCEEEECSCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCc--------C--EEEECCchhhh-HHHHHHHHHHHHHHhcCcC-CCCEEEECCCCChHH
Confidence 9999999999999999999998 3 58899999875 4577888888887665433 45677765 7999
Q ss_pred chhHHHHhh
Q 011283 472 GIGAALLAS 480 (489)
Q Consensus 472 ~iGAA~~aa 480 (489)
++|||++|.
T Consensus 176 ~~GAA~lal 184 (186)
T d2ap1a1 176 MRGAAFLHL 184 (186)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHhh
Confidence 999999875
|
| >d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Hypothetical protein SP2142 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.64 E-value=8.2e-17 Score=145.72 Aligned_cols=166 Identities=17% Similarity=0.175 Sum_probs=120.9
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHH
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLG 318 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLg 318 (489)
++.+++++|||+++|++.+++.+++.++.++|.|||.+.+. +++ .+|+|.++|+.+|-
T Consensus 2 ~n~~~vtlGtGiG~giv~ng~l~~G~~g~AGEiGh~~v~~~--------------------~~~--~~~~e~~~s~~~l~ 59 (175)
T d2gupa2 2 ENAACVVIGTGIGGAMIINGRLHRGRHGLGGEFGYMTTLAP--------------------AEK--LNNWSQLASTGNMV 59 (175)
T ss_dssp SSEEEEEESSSEEEEEEETTEEECCTTSCTTCGGGCBSSCC--------------------SSS--CCBHHHHHSHHHHH
T ss_pred ccEEEEEEecceeEEEEECCEEEECCCCCcceeeeeeeccc--------------------ccc--cccchhhccchHHH
Confidence 57899999999999999999999999988889999887533 222 36999999999994
Q ss_pred HHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhc
Q 011283 319 EIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKR 398 (489)
Q Consensus 319 ei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~R 398 (489)
|.+..... .+ .++ ..++++. ++..++.|..++++
T Consensus 60 ---~~~~~~~~----------~~------~~~-----------------~~~l~~~----------~~~gd~~a~~~~~~ 93 (175)
T d2gupa2 60 ---RYVIEKSG----------HT------DWD-----------------GRKIYQE----------AAAGNILCQEAIER 93 (175)
T ss_dssp ---HHHHHHHS----------SC------CCC-----------------HHHHHHH----------HHTTCHHHHHHHHH
T ss_pred ---HHHHhhcc----------cc------chh-----------------hHHHHHH----------HHcCCHHHHHHHHH
Confidence 43321110 00 011 1123332 22234889999999
Q ss_pred CCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhC--cccccceEEEec---cCCcch
Q 011283 399 GGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLG--TEISKNVVIEHT---KDGSGI 473 (489)
Q Consensus 399 aA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~--~~~~~~v~i~~a---~Dgs~i 473 (489)
+++.+|.+|+++++.++| ..|++||++.+ .+.|.+.+++.+++.+. +......+|+.+ +|++++
T Consensus 94 ~~~~la~~i~~~i~~ldp----------~~IvlGG~i~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~s~~~~~a~l~ 162 (175)
T d2gupa2 94 MNRNLAQGLLNIQYLIDP----------GVISLGGSISQ-NPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLY 162 (175)
T ss_dssp HHHHHHHHHHHHHHHHCC----------SEEEEESGGGG-CHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------ceEEECCcccc-hHHHHHHHHHHHHHHHhhccccCCCCEEEECCCCCcHHHH
Confidence 999999999999999998 36999999877 46788888888887642 222233456665 689999
Q ss_pred hHHHHhhccc
Q 011283 474 GAALLASANS 483 (489)
Q Consensus 474 GAA~~aa~~~ 483 (489)
|||.++...+
T Consensus 163 GAa~l~l~~~ 172 (175)
T d2gupa2 163 GALVNWLQEE 172 (175)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999877543
|
| >d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative regulator protein YcfX species: Salmonella typhimurium [TaxId: 90371]
Probab=99.64 E-value=1.9e-16 Score=133.86 Aligned_cols=115 Identities=18% Similarity=0.268 Sum_probs=92.6
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEE
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTF 171 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tf 171 (489)
|||||+|||++|++++++.|+ ++.+. +++.|. ...+++++.|.+.++++..+.+ ....+|+++
T Consensus 2 yiGiDiGgT~i~~~l~d~~g~---i~~~~--~~~t~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~~igi~~ 64 (117)
T d2ap1a2 2 YYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPH----TSYSAFLDAVCELVEEADQRFG--------VKGSVGIGI 64 (117)
T ss_dssp EEEEEECSSEEEEEEEETTCC---EEEEE--EEECCC----SCHHHHHHHHHHHHHHHHHHHT--------SCCEEEEEE
T ss_pred EEEEEECcceEEEEEEeCCCC---EEEEE--EEeecc----cCHHHHHHHHHHHHHHHHhhcC--------cceeEEEec
Confidence 899999999999999999884 66543 344443 3477899999999998877653 346899999
Q ss_pred eeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccc
Q 011283 172 SFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYW 236 (489)
Q Consensus 172 SfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~ 236 (489)
|+|++. .+|.+. +. +.++|.+.|+.+.|++.| ++|| .+.||++++++||+|.
T Consensus 65 pG~vd~---~~g~i~-~~---~~~~w~~~~l~~~l~~~~---~~pv---~l~NDan~aalaE~w~ 116 (117)
T d2ap1a2 65 PGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL---DRDV---RLDNDANCFALSEAWD 116 (117)
T ss_dssp SSBSCC---TTSCCB-CT---TCTTTTTSCHHHHHHHHH---TSCE---EEEEHHHHHHHHHHTS
T ss_pred CCcccc---ccceee-cc---CccccCCCcHHHHHHHHh---CCCE---EEEeHHHhhHhhcccc
Confidence 999985 556543 43 466788999999999999 8998 8999999999999984
|
| >d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylmannosamine kinase NanK species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=1.1e-16 Score=144.14 Aligned_cols=164 Identities=19% Similarity=0.172 Sum_probs=121.5
Q ss_pred CceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhH
Q 011283 238 EDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYL 317 (489)
Q Consensus 238 ~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yL 317 (489)
-++++.+.+|||++++++.+++.+++.++.++|.|||.++.+ |..| .|++. +|+|.++|+.+|
T Consensus 2 ~~n~~~i~~g~GiG~giv~ng~l~~G~~g~aGEiGh~~~~~~-~~~~--------------~cg~~--gclE~~~s~~al 64 (170)
T d2aa4a2 2 ITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPH-GPVC--------------GCGRT--GCVEAIASGRGI 64 (170)
T ss_dssp CCCEEEEEESSSEEEEEEETTEEECCTTSCCCCGGGSBSCTT-SCBC--------------TTSCB--SBHHHHHSHHHH
T ss_pred CceEEEEEECCCEEEEEEECCEEEECCCCCCCceeeeeeccc-cccc--------------CcCCc--cchhhhhhcchH
Confidence 467899999999999999999999999999999999999865 3222 46665 699999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhh
Q 011283 318 GEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVK 397 (489)
Q Consensus 318 gei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~ 397 (489)
-+..+. .+. ..+ ..++++. ++..++.++.+++
T Consensus 65 ~~~~~~------------------~~~---~~~-----------------~~~l~~~----------~~~gd~~a~~i~~ 96 (170)
T d2aa4a2 65 AAAAQG------------------ELA---GAD-----------------AKTIFTR----------AGQGDEQAQQLIH 96 (170)
T ss_dssp HHTCCG------------------GGT---TCC-----------------HHHHHHH----------HHTTCHHHHHHHH
T ss_pred HHHHHh------------------hcc---CCC-----------------HHHHHHH----------HHcCCchhHHHHH
Confidence 432110 000 001 1123332 2234488999999
Q ss_pred cCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchh
Q 011283 398 RGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIG 474 (489)
Q Consensus 398 RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iG 474 (489)
++++.+|.+|+++++.++| + .|+++|++.. .+.|.+.+++.+.+... ...++|+.+ +|++++|
T Consensus 97 ~~~~~la~~l~~l~~~ldP--------~--~IvlgG~i~~-~~~~~~~i~~~~~~~~~---~~~~~I~~s~l~~~a~~~G 162 (170)
T d2aa4a2 97 RSARTLARLIADIKATTDC--------Q--CVVVGGSVGL-AEGYLALVETYLAQEPA---AFHVDLLAAHYRHDAGLLG 162 (170)
T ss_dssp HHHHHHHHHHHHHHHHHCC--------S--EEEEEHHHHT-STTHHHHHHHHHTTSCG---GGCCEEEECSCSSCHHHHH
T ss_pred HHHHHHHHHHHhhhheECC--------C--EEEEeChhhh-hhhHHHHHHHHHHhccC---CCCCeEEecCCCCcHHHHH
Confidence 9999999999999999998 3 5889999865 45677888877765422 234667766 7899999
Q ss_pred HHHHhh
Q 011283 475 AALLAS 480 (489)
Q Consensus 475 AA~~aa 480 (489)
||++|.
T Consensus 163 AA~lA~ 168 (170)
T d2aa4a2 163 AALLAQ 168 (170)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 999984
|
| >d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylglucosamine kinase species: Thermotoga maritima [TaxId: 2336]
Probab=99.57 E-value=1.4e-15 Score=136.70 Aligned_cols=155 Identities=14% Similarity=0.094 Sum_probs=120.1
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHH
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLG 318 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLg 318 (489)
++++.+++|||++++++.+++.+++.++.++|.|||.+- +. +. .+|+|..+|+.++.
T Consensus 2 ~~~~~i~~g~GiG~gii~~g~l~~G~~g~aGEiGh~~v~-~~--------------------~~--~~c~~~~~s~~~l~ 58 (169)
T d2hoea2 2 DSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVF-NG--------------------NE--YVFLEDVCNENVVL 58 (169)
T ss_dssp SCEEEEEESSSCEEEEEETTEECCCSSSCCCCGGGCEEE-CS--------------------SS--EEEHHHHHCHHHHH
T ss_pred CeEEEEEECCceEEEEEECCEEEeCCCCCCccccccccc-CC--------------------CC--cccccccchHHHHH
Confidence 678999999999999999999999999988899999872 21 22 36999999999994
Q ss_pred HHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhc
Q 011283 319 EIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKR 398 (489)
Q Consensus 319 ei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~R 398 (489)
+ .+... +.+.+ ++. ++..+..++.++++
T Consensus 59 ~---~~~~~----------------------~~~~l-----------------~~~----------~~~gd~~a~~~~~~ 86 (169)
T d2hoea2 59 K---HVLSM----------------------GFSSL-----------------AEA----------RDSGDVRVKEYFDD 86 (169)
T ss_dssp H---HHHHH----------------------CCC-T-----------------THH----------HHTTCHHHHHHHHH
T ss_pred h---hhccc----------------------chHHH-----------------HHH----------HHcCCHHHHHHHHH
Confidence 4 32210 00111 111 12234778899999
Q ss_pred CCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhH
Q 011283 399 GGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGA 475 (489)
Q Consensus 399 aA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGA 475 (489)
+++.+|.+|+++++.++| ..|+++|++.+..+.|.+.+++.+++...+. ..++|+.+ +|++.+||
T Consensus 87 ~~~~la~~l~n~~~~~dP----------e~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~--~~~~i~~s~~~~~a~~~GA 154 (169)
T d2hoea2 87 IARYFSIGLLNLIHLFGI----------SKIVIGGFFKELGENFLKKIKIEVETHLLYK--HSVDMSFSKVQEPVIAFGA 154 (169)
T ss_dssp HHHHHHHHHHHHHHHHCC----------CEEEEEEGGGGGHHHHHHHHHHHHHHHCSSS--CCCEEEECCCCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------CEEEEeChHHhchHHHHHHHHHHHHHhcCCC--CCCEEEECCCCCCHHHHHH
Confidence 999999999999999998 3699999999999999999999999876543 34556655 79999999
Q ss_pred HHHhh
Q 011283 476 ALLAS 480 (489)
Q Consensus 476 A~~aa 480 (489)
|.++.
T Consensus 155 a~~~~ 159 (169)
T d2hoea2 155 AVHAL 159 (169)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
|
| >d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylmannosamine kinase NanK species: Escherichia coli [TaxId: 562]
Probab=99.55 E-value=2.4e-15 Score=127.56 Aligned_cols=113 Identities=17% Similarity=0.237 Sum_probs=85.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
++|+||+|||++|++++++.|+ ++.+. +++.|.. .+.+.+++.|.+.++++.. +...+|++
T Consensus 2 ~~lgiDiGgT~i~~~l~d~~G~---i~~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~-----------~~~~igI~ 62 (119)
T d2aa4a1 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQA-----------HAQRVAIA 62 (119)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGG-----------GCSEEEEE
T ss_pred eEEEEEeCcCEEEEEEEcCCCC---EEEeE--EEecccc---CcHHHHHHHHHHHHHHhhc-----------cCceEEEE
Confidence 4799999999999999999874 66543 3444432 3567788888777766532 34679999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccc
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGAR 234 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~ 234 (489)
+|+|++. ..+.+. . ..++++|.+.|+++.|++.| ++|| .+.||++|++++|+
T Consensus 63 ~pG~v~~---~~~~~~-~--~~~l~~w~~~~l~~~l~~~~---~~pv---~i~NDanaaalgE~ 114 (119)
T d2aa4a1 63 STGIIRD---GSLLAL-N--PHNLGGLLHFPLVKTLEQLT---NLPT---IAINDAQAAAWAEF 114 (119)
T ss_dssp ESSEEET---TEEECS-S--GGGGGGGTTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHH
T ss_pred eeeeEcC---CCcEEE-c--cCccccccCCCHHHHHHHHh---CCCE---EEEehHHHHHHHHH
Confidence 9999985 233332 2 23556778899999999999 8998 89999999999993
|
| >d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Inorganic polyphosphate/ATP-glucomannokinase PPGMK species: Arthrobacter sp. KM [TaxId: 184230]
Probab=99.54 E-value=7e-15 Score=126.02 Aligned_cols=123 Identities=18% Similarity=0.263 Sum_probs=89.3
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
..||||+|||++|++++++.++ .++.+ ++++|+... .+++.+++.|.+.+.++...... ......+|++
T Consensus 3 ~vlGiDiGgT~i~~~l~d~~~g--~i~~~---~~~~~t~~~-~~~~~~~~~i~~~~~~l~~~~~~-----~~~~~gIGi~ 71 (129)
T d1woqa1 3 PLIGIDIGGTGIKGGIVDLKKG--KLLGE---RFRVPTPQP-ATPESVAEAVALVVAELSARPEA-----PAAGSPVGVT 71 (129)
T ss_dssp CEEEEEECSSEEEEEEEETTTT--EEEEE---EEEEECCSS-CCHHHHHHHHHHHHHHHHTSTTC-----CCTTCCEEEE
T ss_pred CEEEEEECcceEEEEEEECCCC--EEEEE---EeecccccC-CCHHHHHHHHHHHHHHHHhcccc-----ccccceeeec
Confidence 4799999999999999998653 34433 234443322 35788999999998887654432 1345678888
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccccccc
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD 237 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~ 237 (489)
+|+|++. +.+.... . ..++|.+.|+.+.|++.+ ++|| .|.||+++++++|+|.+
T Consensus 72 ~pG~vd~-----~~~~~~~-~-~~~~w~~~~l~~~l~~~~---~~pv---~i~NDan~aalgE~~~G 125 (129)
T d1woqa1 72 FPGIIQH-----GVVHSAA-N-VDKSWLNTDIDALLTARL---GRPV---EVINDADAAGLAEARYG 125 (129)
T ss_dssp ESSCEET-----TEECCCT-T-SCGGGTTCBHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHS
T ss_pred ceeeEec-----CeEEEec-c-cCCCcccccchhhHHHhc---CCcE---EEEEhHHHHHHHHHhhc
Confidence 8888863 4433221 1 224677899999999999 8998 79999999999999864
|
| >d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Hypothetical protein SP2142 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.53 E-value=3.6e-15 Score=125.67 Aligned_cols=112 Identities=20% Similarity=0.241 Sum_probs=80.0
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
++++||+|||++|+++++..|+ ++.+. +++.|+ ..+++.+. |.+++++ .+...+|++
T Consensus 2 ~i~~iDiGgT~i~~~l~d~~g~---i~~~~--~~~t~~-----~~~~~~~~----i~~~~~~---------~~i~gIGi~ 58 (114)
T d2gupa1 2 TIATIDIGGTGIKFASLTPDGK---ILDKT--SISTPE-----NLEDLLAW----LDQRLSE---------QDYSGIAMS 58 (114)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEEE--EECCCS-----SHHHHHHH----HHHHHTT---------SCCSEEEEE
T ss_pred eEEEEEeCcccEEEEEEcCCCC---EEEEE--EEcccc-----cHHHHHHH----HHHHhhh---------cccceEEEe
Confidence 5789999999999999998774 55532 334332 23444444 4444433 235779999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccC
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~ 238 (489)
+|+|++. ++|.+.. ..+++.|.+.++.+.|++ | ++|| .|.||++|+++||.|.+|
T Consensus 59 ~pG~vd~---~~g~i~~---~~~l~~~~~~~l~~~l~~-~---~~pV---~veNDanaaalgE~~~~p 113 (114)
T d2gupa1 59 VPGAVNQ---ETGVIDG---FSAVPYIHGFSWYEALSS-Y---QLPV---HLENDANCVGLSELLAHP 113 (114)
T ss_dssp ESSEECT---TTCBEES---CCSSGGGSSSBHHHHTGG-G---CCCE---EEEEHHHHHHHHHHHHCT
T ss_pred ccccccC---CccEEEc---ccccCcccCCcHHHHHHh-C---CCCE---EEEhHHHHHHHHHHHHCc
Confidence 9999985 4565542 225566778899998853 5 8998 899999999999988765
|
| >d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylglucosamine kinase species: Thermotoga maritima [TaxId: 2336]
Probab=99.53 E-value=8.5e-15 Score=125.39 Aligned_cols=126 Identities=11% Similarity=0.217 Sum_probs=97.4
Q ss_pred ccccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeee
Q 011283 88 ERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167 (489)
Q Consensus 88 E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~l 167 (489)
+.+++||||+|||+++++++++.|+ ++.+. ++++|.. .+.+++++.+.+.+.++++..+.. ......+
T Consensus 2 ~~~~~igidig~~~i~~~l~d~~G~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~----~~~i~gi 69 (128)
T d2hoea3 2 NCAYVLGIEVTRDEIAACLIDASMN---ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKL----GSKLSAL 69 (128)
T ss_dssp GGCEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHT----TCCCCEE
T ss_pred CcEEEEEEEECCCEEEEEEEcCCCC---EEEEE--EEecccC---CCHHHHHHHHHHHHHHHHHHhccc----cCceEEE
Confidence 4568999999999999999999885 66543 3444433 357889999999999998765532 2457889
Q ss_pred eeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccC
Q 011283 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238 (489)
Q Consensus 168 G~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~ 238 (489)
|+++|+|++. ++|++. |+. ++ +|.+.|+.+.|++.+ ++|| .+.||++++++||.|.+.
T Consensus 70 gi~~pG~vd~---~~g~i~-~~~--~l-~w~~~~l~~~l~~~~---~~pv---~i~NDa~~~alaE~~fG~ 127 (128)
T d2hoea3 70 TVAAPGPIDT---ERGIII-DPR--NF-PLSQIPLANLLKEKY---GIEV---WVENDADMGAVGEKWYTK 127 (128)
T ss_dssp EEEESSCEET---TTTEEC-CCS--SC-TTBTSCHHHHHHHHH---CSEE---EEEEHHHHHHHHHHHHTT
T ss_pred ecceeeeEcC---CCCEEE-eec--cc-cccCCchHHHHHHHc---CCCE---EEEeHHHHHHHHHHHhcC
Confidence 9999999985 445554 332 22 366889999999999 8998 799999999999998754
|
| >d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Mlc protein species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=1.2e-14 Score=124.50 Aligned_cols=126 Identities=13% Similarity=0.176 Sum_probs=99.7
Q ss_pred CccccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceee
Q 011283 87 NERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166 (489)
Q Consensus 87 ~E~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~ 166 (489)
+|..+||+||+|+|+++++++|+.|+ ++.+. .+++|.. +.+++++.|++.|.+++++.+.. ..+...
T Consensus 1 te~~~~l~i~i~~~~i~~~l~Dl~G~---~l~~~--~~~~~~~----~~~~~~~~l~~~i~~~l~~~~~~----~~~i~g 67 (129)
T d1z6ra2 1 TEAWHYLSLRISRGEIFLALRDLSSK---LVVEE--SQELALK----DDLPLLDRIISHIDQFFIRHQKK----LERLTS 67 (129)
T ss_dssp CTTCEEEEEEEETTEEEEEEEETTCC---EEEEE--EEECCSS----CSSCHHHHHHHHHHHHHHHTGGG----CCCEEE
T ss_pred CCceEEEEEEECCCEEEEEEEcCCCC---EEEEE--Eeecccc----chhHHHHHHHHHHHHHHHhcCcc----ccccee
Confidence 46788999999999999999999985 55543 3455432 35678999999999999887643 256789
Q ss_pred eeeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccccccc
Q 011283 167 IGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD 237 (489)
Q Consensus 167 lG~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~ 237 (489)
+|+++|++++. +++.+...+ ++++|.+.|+.+.|++.+ ++|| .+.||+++.+++|+|.+
T Consensus 68 Igi~~pG~v~~---~~~~~~~~~---~~~~w~~~~l~~~l~~~~---~~pV---~~~NDa~a~alaE~~~G 126 (129)
T d1z6ra2 68 IAITLPGIIDT---ENGIVHRMP---FYEDVKEMPLGEALEQHT---GVPV---YIQHDISAWTMAEALFG 126 (129)
T ss_dssp EEEEESSEEET---TTTEEEECT---TCTTCSSBCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHS
T ss_pred EEEeeeeeeee---cccceeccC---cchhccCcchHHHHHHhc---CCCE---EEEehHHHHHHHHHhhC
Confidence 99999999986 455554322 445677899999999999 8998 79999999999999865
|
| >d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Transcriptional regulator VC2007 species: Vibrio cholerae [TaxId: 666]
Probab=99.48 E-value=4e-14 Score=120.92 Aligned_cols=122 Identities=17% Similarity=0.260 Sum_probs=94.8
Q ss_pred cEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeE
Q 011283 91 LFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFT 170 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~t 170 (489)
.||+||+|+|+++++++++.|+ ++.+. ++++|.. +.+++.+.|.+.|.+++++.+.. ..+...+|++
T Consensus 5 ~~lgi~ig~~~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~~----~~~i~gIgi~ 71 (128)
T d1z05a3 5 QFLSMRLGRGYLTIALHELGGE---VLIDT--KIDIHEI----DQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAIT 71 (128)
T ss_dssp EEEEEEEETTEEEEEEEETTSC---EEEEE--EEECCCC----BHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEEcCCCC---EEEEE--EeccccC----CHHHHHHHHHHHHHHHHHHcccc----cccceEEEee
Confidence 5899999999999999999985 55543 3455432 45789999999999999987643 2457899999
Q ss_pred EeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeeccccccccccccccC
Q 011283 171 FSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDE 238 (489)
Q Consensus 171 fSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~~ 238 (489)
+|+|++. +.+.+ .|.. ..+|.+.++.+.|++.+ ++|| .+.||+++++++|+|.+.
T Consensus 72 ~pG~vd~---~~~~~-~~~~---~~~~~~~~l~~~l~~~~---~~PV---~l~NDana~a~aE~~~G~ 126 (128)
T d1z05a3 72 LPGLVNS---EQGIV-LQMP---HYNVKNLALGPEIYKAT---GLPV---FVANDTRAWALAEKLFGH 126 (128)
T ss_dssp ESSEEET---TTTEE-EECS---SSBCSSBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHST
T ss_pred eeeeeec---cceee-eccc---cCCCCCcchHHHHHHhc---CCCE---EEEehHHHHHHHHHhhCC
Confidence 9999975 23333 3432 22467889999999999 8998 799999999999998753
|
| >d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative fructokinase YhdR species: Bacillus subtilis [TaxId: 1423]
Probab=99.45 E-value=4.1e-14 Score=119.58 Aligned_cols=112 Identities=14% Similarity=0.222 Sum_probs=81.9
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeeeEE
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTF 171 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~tf 171 (489)
|+|||+|||++|++++++.|+ ++.+ .++|+. ..+++++.|.+.+.+ . +...+|+++
T Consensus 2 ~~giDiGgT~i~~~l~d~~g~---i~~~----~~~~t~----~~~~~~~~i~~~~~~----~---------~~~~igi~~ 57 (118)
T d1xc3a1 2 LGGIEAGGTKFVCAVGREDGT---IIDR----IEFPTK----MPDETIEKVIQYFSQ----F---------SLQAIGIGS 57 (118)
T ss_dssp EEEEEECSSEEEEEEECTTSC---EEEE----EEEECC----CHHHHHHHHHHHHTT----S---------CCSEEEEEE
T ss_pred EEEEEeccCEEEEEEEcCCCC---EEEE----EEecCC----CHHHHHHHHHHHHhh----c---------cceecceeE
Confidence 789999999999999999875 6653 345543 345666666554432 1 246799999
Q ss_pred eeeccccc--cccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccccccc
Q 011283 172 SFPVKQTS--IDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWD 237 (489)
Q Consensus 172 SfP~~q~~--i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~~~~~ 237 (489)
++|++... ...|.+... ...+|.+.|+.+.|++.+ ++|| .+.||+++++++|+|.+
T Consensus 58 ~G~v~~~~~~~~~g~v~~~----~~~~w~~~~l~~~l~~~~---~~pv---~i~NDana~algE~~~G 115 (118)
T d1xc3a1 58 FGPVDNDKTSQTYGTITAT----PKAGWRHYPFLQTVKNEM---KIPV---GFSTDVNAAALGEFLFG 115 (118)
T ss_dssp CSSBCCCTTSTTTTSBCCC----SSTTTBTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHS
T ss_pred EeeeecCCCccceeEEEcC----CcccccCcCHHHHHHHHH---CCCE---EEeehHHHHHHHHHhhC
Confidence 99997532 233444322 223577899999999999 8998 79999999999999865
|
| >d1xc3a2 c.55.1.10 (A:119-294) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative fructokinase YhdR species: Bacillus subtilis [TaxId: 1423]
Probab=99.40 E-value=9.4e-14 Score=125.44 Aligned_cols=156 Identities=15% Similarity=0.212 Sum_probs=107.1
Q ss_pred cCceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeeccccc-ccCCCcccccccccccccCCcchhhhhhhhchh
Q 011283 237 DEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGA-FSKGLPLTEFDRDMDAASINPGEQIYEKTISGM 315 (489)
Q Consensus 237 ~~~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~-f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~ 315 (489)
+.++++++++|||++++++.+++.+++.+ ++|.|||.++..... ++ ..|+.. ..|+|.++|+.
T Consensus 1 G~~~~~~l~lGtGiG~gii~ng~l~~G~~--aGEiGh~~v~~~~~~~~~-------------~~~~~~-~~~~e~~~s~~ 64 (176)
T d1xc3a2 1 GLDSCLYITIGTGIGAGAIVEGRLLQGLS--HPEMGHIYIRRHPDDVYQ-------------GKCPYH-GDCFEGLASGP 64 (176)
T ss_dssp TCSCEEEEEESSSEEEEEEETTEECCSSS--CCCGGGCBCCCCTTCCCC-------------CSBTTT-BSBHHHHHSHH
T ss_pred CcceEEEEEEccCeEEEEEECCEEeeCCC--CCccceecccccccCccc-------------cCcCCc-cchhhhhccHH
Confidence 35789999999999999999999887753 468889888754221 11 023332 14999999999
Q ss_pred hHHHHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhh
Q 011283 316 YLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTI 395 (489)
Q Consensus 316 yLgei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V 395 (489)
.|-+ +. .+. .. +..| +..+
T Consensus 65 ~l~~---~~----~~~-------------------~~----------------------------~~~~-------~~~i 83 (176)
T d1xc3a2 65 AIEA---RW----GKK-------------------AA----------------------------DLSD-------IAQV 83 (176)
T ss_dssp HHHH---HH----SSC-------------------TT----------------------------TTTT-------CHHH
T ss_pred HHHH---HH----hhc-------------------ch----------------------------hhHH-------HHHH
Confidence 8832 11 000 00 0001 2356
Q ss_pred hhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcc-------cccceEEEec-
Q 011283 396 VKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTE-------ISKNVVIEHT- 467 (489)
Q Consensus 396 ~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~-------~~~~v~i~~a- 467 (489)
++++++.+|.+|+++++.++| + .|++|||+.+..+ +.+.+.+.+++++... ....++|+.+
T Consensus 84 ~~~~~~~la~~i~~~~~~~dP--------~--~IviGGgi~~~~~-l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~ 152 (176)
T d1xc3a2 84 WELEGYYIAQALAQYILILAP--------K--KIILGGGVMQQKQ-VFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPR 152 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC--------S--CEEEESGGGGSTH-HHHHHHHHHHHHHTTSSCCGGGTTTGGGTEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHCC--------C--EEEEcChhhccHh-HHHHHHHHHHHHHHHhhccccccccCCCeEEeCC
Confidence 788888999999999999998 3 5999999998755 4566777776654211 1123456665
Q ss_pred --cCCcchhHHHHhh
Q 011283 468 --KDGSGIGAALLAS 480 (489)
Q Consensus 468 --~Dgs~iGAA~~aa 480 (489)
+|++.+|||.+|.
T Consensus 153 lg~~a~l~GAa~la~ 167 (176)
T d1xc3a2 153 LGSNAGIIGTLVLAH 167 (176)
T ss_dssp TGGGHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHH
Confidence 7999999999875
|
| >d1woqa2 c.55.1.10 (A:140-263) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Inorganic polyphosphate/ATP-glucomannokinase PPGMK species: Arthrobacter sp. KM [TaxId: 184230]
Probab=99.30 E-value=1.6e-13 Score=117.12 Aligned_cols=117 Identities=15% Similarity=0.199 Sum_probs=87.1
Q ss_pred ceEEEEEecCCcceeEEeeccccccccCCcCCCCCeeeecccccccCCCcccccccccccccCCcchhhhhhhhchhhHH
Q 011283 239 DVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLG 318 (489)
Q Consensus 239 ~~~iglIlGTG~Na~yie~~~~i~~~~g~~~~~g~miIn~E~G~f~~~lp~t~~D~~~D~~s~~pg~~~~Ek~~SG~yLg 318 (489)
.+++++++|||++++++.+++.+++ +|.|||.++ .+|+|.++|+..+.
T Consensus 3 g~v~~ltlGTGiG~gii~nG~l~~g-----gEiGh~~~~---------------------------~~~~e~~~s~~~~~ 50 (124)
T d1woqa2 3 GTVLVITLGTGIGSAFIFDGKLVPN-----AELGHLEID---------------------------GHDAETKASAVARE 50 (124)
T ss_dssp SEEEEEEESSSEEEEEEETTEEETT-----CCGGGCEET---------------------------TEEHHHHHSHHHHH
T ss_pred cEEEEEEEcCCeeEEEEECCEEccC-----Ccccccccc---------------------------CCChhhhhccchHH
Confidence 5789999999999999999886543 355555442 25899999998762
Q ss_pred HHHHHHHHHHhhhccccCCCccccccccccccCcccccccccCchhHhhhhhhhhhhcccccccccceeeeeehhhhhhc
Q 011283 319 EIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKR 398 (489)
Q Consensus 319 ei~R~~l~~~~~~~~lf~~~~~~~l~~~~~~~t~~l~~i~~d~~~~~~~~~~il~~~~~~~~~~~d~~~~~~ia~~V~~R 398 (489)
+ . . .-+++
T Consensus 51 ~---~--------~-------------------------------------------------------------~~~~~ 58 (124)
T d1woqa2 51 R---D--------G-------------------------------------------------------------LSWDE 58 (124)
T ss_dssp H---T--------T-------------------------------------------------------------CCHHH
T ss_pred H---H--------H-------------------------------------------------------------HHHHH
Confidence 1 0 0 00233
Q ss_pred CCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec---cCCcchhH
Q 011283 399 GGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT---KDGSGIGA 475 (489)
Q Consensus 399 aA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a---~Dgs~iGA 475 (489)
+++.+|.+|++++..++| .+|++|||+.+..+.|.+.++ .+++|+.+ +|++++||
T Consensus 59 ~~~~la~~l~~~~~~~dP----------e~IVlGGgi~~~~~~~~~~l~------------~~~~i~~a~l~~~AgliGA 116 (124)
T d1woqa2 59 YSVLLQRYFSHVEFLFSP----------ELFIVGGGISKRADEYLPNLR------------LRTPIVPAVLRNEAGIVGA 116 (124)
T ss_dssp HHHHHHHHHHHHHHHHCC----------SEEEEESGGGGGGGGTGGGCC------------CSSCEEECSCSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------CEEEEcchHhhChHHHhhhhh------------ccCeEEecCcCCcHHHHHH
Confidence 556788899999999998 369999999999887765442 34667665 79999999
Q ss_pred HHHhhc
Q 011283 476 ALLASA 481 (489)
Q Consensus 476 A~~aa~ 481 (489)
|+.++.
T Consensus 117 Al~a~~ 122 (124)
T d1woqa2 117 AIEIAL 122 (124)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
|
| >d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Fumble-like domain: Type II pantothenate kinase, CoaW species: Staphylococcus aureus [TaxId: 1280]
Probab=99.24 E-value=8.1e-13 Score=124.93 Aligned_cols=73 Identities=11% Similarity=0.129 Sum_probs=57.5
Q ss_pred eehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEe---
Q 011283 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEH--- 466 (489)
Q Consensus 390 ~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~--- 466 (489)
.++..+++..+++++..+..+.+.++| + .|+++||++...|.+++.++++++.. .+++.+
T Consensus 191 ~~a~~~~~~~~~~l~~~~~~~~~~~~~--------~--~Iv~~GG~~~~~~~l~~~i~~~~~~~-------~~~i~~~~~ 253 (267)
T d2ewsa1 191 NKLAAVIGVVGEVVTTMAITVAREFKT--------E--NIVYIGSSFHNNALLRKVVEDYTVLR-------GCKPYYVEN 253 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--------C--EEEEESGGGTTCHHHHHHHHHHHHHT-------TCEEEECTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCC--------C--CEEEECChhhcCHHHHHHHHHHHHhC-------CCEEEECCC
Confidence 566677788888999999999999987 2 48888998899999999999988752 234443
Q ss_pred ccCCcchhHHHHh
Q 011283 467 TKDGSGIGAALLA 479 (489)
Q Consensus 467 a~Dgs~iGAA~~a 479 (489)
.++++.+|||+++
T Consensus 254 ~~~aGaiGA~~L~ 266 (267)
T d2ewsa1 254 GAFSGAIGALYLE 266 (267)
T ss_dssp GGGHHHHHHHHTC
T ss_pred ccHHHHHHHHHhc
Confidence 3678899998875
|
| >d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glucokinase domain: Glucokinase Glk species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=7.7e-11 Score=97.70 Aligned_cols=105 Identities=12% Similarity=0.179 Sum_probs=64.7
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
.++|++|+||||+|+++++.++. .+... ...|+.. .+ .+.+.+.+++++.+ .....+++
T Consensus 2 ~~~L~~DIGGTn~r~alv~~~~~---~l~~~---~~~~~~~----~~----~~~~~i~~~~~~~~-------~~~~~~~i 60 (110)
T d1q18a1 2 KYALVGDVGGTNARLALCDIASG---EISQA---KTYSGLD----YP----SLEAVIRVYLEEHK-------VEVKDGCI 60 (110)
T ss_dssp CEEEEEEECSSEEEEEEEETTTC---CEEEE---EEEEGGG----CS----CHHHHHHHHHHHHT-------CCCSEEEE
T ss_pred cEEEEEEECchhEEEEEEEcCCC---eEEEE---Eeecccc----hh----hHHHHHHHHHhhcc-------cccceEEE
Confidence 47899999999999999997653 22221 1223221 11 23344555555544 23467888
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcc-eEeeeeecccccccccc
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLD-MRVSALVNDTVGTLAGA 233 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~-v~v~ai~NDtvatlla~ 233 (489)
+.++|++.... .-+..+|. +..+.|++.| +++ | .|+||++|+++|-
T Consensus 61 ~~ag~~~~~~~-~~~n~~w~-----------~~~~~l~~~~---~~~~v---~v~NDa~AaA~gi 107 (110)
T d1q18a1 61 AIACPITGDWV-AMTNHTWA-----------FSIAEMKKNL---GFSHL---EIINDFTAVSMAI 107 (110)
T ss_dssp EESSCCCSSEE-CCSSGGGC-----------EEHHHHHHHT---TCSEE---EEEEHHHHHHHHG
T ss_pred cccccccCcEE-eecccCCc-----------cCHHHHHHHh---CCCcE---EEEehHHHHhccc
Confidence 88888875321 11222453 3456677766 765 6 7999999998874
|
| >d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hydroxyglutaryl-CoA dehydratase component A species: Acidaminococcus fermentans [TaxId: 905]
Probab=98.93 E-value=6.9e-10 Score=104.17 Aligned_cols=74 Identities=22% Similarity=0.094 Sum_probs=45.3
Q ss_pred ehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEeccCC
Q 011283 391 VCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHTKDG 470 (489)
Q Consensus 391 ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a~Dg 470 (489)
.+..+..+...+++..+..+.+..+| + .|+++||++. .+.|++.+++.++. +-+.-...+++
T Consensus 183 ~~~i~~~~~~~~~~~~~~~~~~~~~~--------~--~Iv~gGGv~~-~~~~~~~l~~~l~~-------~i~~~~~~~~a 244 (259)
T d1huxa_ 183 KIDIIAGIHRSVASRVIGLANRVGIV--------K--DVVMTGGVAQ-NYGVRGALEEGLGV-------EIKTSPLAQYN 244 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCC--------S--SEEEESGGGG-CHHHHHHHHHHHCS-------CEECCGGGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC--------C--cEEEEccccc-cHHHHHHHHHHHCC-------CEEcCCCccHH
Confidence 34444444444455454444444455 2 3889999995 58888888776521 11112345789
Q ss_pred cchhHHHHhhcc
Q 011283 471 SGIGAALLASAN 482 (489)
Q Consensus 471 s~iGAA~~aa~~ 482 (489)
+.+|||++|+-.
T Consensus 245 gaiGAA~lA~~~ 256 (259)
T d1huxa_ 245 GALGAALYAYKK 256 (259)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998743
|
| >d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=8.8e-10 Score=103.21 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=76.0
Q ss_pred ceeeeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcc---cccc
Q 011283 385 RKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTE---ISKN 461 (489)
Q Consensus 385 ~~~~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~---~~~~ 461 (489)
++..+++|..|++++++.++..+++++++++|.... ..+..-|++.|||+++.+.+++.+++.|.+...+. ....
T Consensus 107 A~~GD~~A~~Il~~aa~~La~~i~~~~~~l~~~~~~--~~~~~~Vvl~Ggv~~~~~~l~~~~~~~L~~~~~~~~~~~~~~ 184 (227)
T d2ch5a1 107 AQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQ--GKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSS 184 (227)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGGC--STTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSE
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhhc--cccCCCeEEechHhhcchHHHHHHHHHHHHhcchhhcccCCe
Confidence 455669999999999999999999999999984210 01335599999999999999999999998764322 2235
Q ss_pred eEEEeccCCcchhHHHHhhccc
Q 011283 462 VVIEHTKDGSGIGAALLASANS 483 (489)
Q Consensus 462 v~i~~a~Dgs~iGAA~~aa~~~ 483 (489)
++++..++.+.+|||++|+...
T Consensus 185 ~~~~~~~~~p~~GAa~LA~~~~ 206 (227)
T d2ch5a1 185 FTLMKLRHSSALGGASLGARHI 206 (227)
T ss_dssp EEEEEESSCTHHHHHHHHHHTT
T ss_pred eEeecCCCccHHHHHHHHHHHc
Confidence 7777789999999999998543
|
| >d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Probable N-acetylglucosamine kinase CV2896 species: Chromobacterium violaceum [TaxId: 536]
Probab=98.78 E-value=6.3e-09 Score=86.31 Aligned_cols=107 Identities=17% Similarity=0.106 Sum_probs=68.3
Q ss_pred cccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCce--ee
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQ--RE 166 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~--~~ 166 (489)
..+||+||+|||++|+++++..|+ ++.+. ..-|.... .+.++.++.|.+.+.+.+++.+... ... ..
T Consensus 3 m~y~lGID~GGT~tk~~l~d~~G~---il~~~---~~~~~~~~-~~~~~~~~~i~~~i~~~~~~ag~~~----~~~~~~~ 71 (114)
T d1zc6a1 3 IRYLIGVDGGGTGTRIRLHASDGT---PLAMA---EGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPA----APASACA 71 (114)
T ss_dssp CCEEEEEEECSSCEEEEEEETTCC---EEEEE---EESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCC----CCGGGEE
T ss_pred ccEEEEEEcCcceEEEEEEcCCCC---EEEEE---EccCCCcc-cCHHHHHHHHHHHHHHHHHHcCCCh----hhhceeE
Confidence 458999999999999999999874 55432 12233332 3578999999999999988766432 222 23
Q ss_pred eeeEEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhcCcceEeeeeecccccccccc
Q 011283 167 IGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGA 233 (489)
Q Consensus 167 lG~tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla~ 233 (489)
++++.+++ ...+....|.+.+ .+..-+.|.||+++++++.
T Consensus 72 ~~~g~aG~-----------------------~~~~~~~~l~~~~----~~~~~v~v~nDa~~A~~ga 111 (114)
T d1zc6a1 72 IGLGLSGV-----------------------HNRQWAGEFESQA----PGFARLSLATDGYTTLLGA 111 (114)
T ss_dssp EEEEESCC-----------------------CTTSHHHHHHHTC----CCCSEEEEECHHHHHHHHH
T ss_pred EEEEecCC-----------------------CcHHHHHHHHHhC----CCCCeEEEECHHHHHHHHh
Confidence 33333332 2234444544432 2222347999999999873
|
| >d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=1.7e-06 Score=71.75 Aligned_cols=110 Identities=19% Similarity=0.203 Sum_probs=70.4
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhhhHHHhhcCccccCCCceeeeee
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~~~~~lG~ 169 (489)
..||+||-|||+.|+.+++..|+ ++.+. ..-|.+....+.++..+.|.+.|.+.+++.+... ..+...+++
T Consensus 3 ~~~~GIDgGGTkT~~~l~d~~G~---~l~~~---~~g~~N~~~~~~~~~~~~i~~~i~~~l~~~~~~~---~~~i~~i~~ 73 (117)
T d2ch5a2 3 AIYGGVEGGGTRSEVLLVSEDGK---ILAEA---DGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP---LVPLRSLGL 73 (117)
T ss_dssp CEEEEEEECTTCEEEEEEETTSC---EEEEE---EECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCT---TCCBSEEEE
T ss_pred cEEEEEEcChhhEEEEEECCCCC---EEEEE---EcCCCCcchhhHHHHHHHHHHHHHHHHHHhcCCC---CccccEEEE
Confidence 36999999999999999999885 55432 1123333234567788888888888887655321 123455666
Q ss_pred EEeeeccccccccceeeeeccceeeecCCCchHHHHHHHHHHhc--CcceEeeeeeccccccccc
Q 011283 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQ--GLDMRVSALVNDTVGTLAG 232 (489)
Q Consensus 170 tfSfP~~q~~i~~g~li~wtKgf~~~~~~G~dv~~lL~~al~~~--~l~v~v~ai~NDtvatlla 232 (489)
+.++ +++ .+-.+.|+++|+++ ++..+ +.|.||+.+++.+
T Consensus 74 GlAG-~~~----------------------~~~~~~l~~~l~~~~~~~~~~-v~v~nDa~~Al~~ 114 (117)
T d2ch5a2 74 SLSG-GDQ----------------------EDAGRILIEELRDRFPYLSES-YLITTDAAGSIAT 114 (117)
T ss_dssp EETT-TTC----------------------HHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHH
T ss_pred Eeec-cCc----------------------chhHHHHHHHHHHHCCCCCce-EEEeccHHHHHhh
Confidence 6666 332 13445666666554 33222 3799999998875
|
| >d1zc6a2 c.55.1.5 (A:122-292) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Probable N-acetylglucosamine kinase CV2896 species: Chromobacterium violaceum [TaxId: 536]
Probab=96.66 E-value=0.00027 Score=62.05 Aligned_cols=67 Identities=24% Similarity=0.217 Sum_probs=42.4
Q ss_pred eeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccch-hHHHHHHHHHHHHhhCcccccceEEEe
Q 011283 388 VIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHY-TQYRRYVHEAVTELLGTEISKNVVIEH 466 (489)
Q Consensus 388 ~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~-~~f~~~i~~~l~~~~~~~~~~~v~i~~ 466 (489)
.+.+|..|+++++..++..+.++ .+.. ...|++.||++.++ +.+.+.+ +.. ++.
T Consensus 103 gD~~A~~Il~~a~~~l~~~~~~~----~~~~-------~~~v~l~Ggl~~~~~~~l~~~~----~~~----------l~~ 157 (171)
T d1zc6a2 103 VDPEADALLRQAGEDAWAIARAL----DPQD-------ELPVALCGGLGQALRDWLPPGF----RQR----------LVA 157 (171)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHH----CTTC-------CSCEEEESHHHHHTGGGSCHHH----HHH----------CCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh----cccC-------CceEEEECchHHHHHHHHHHHH----Hhh----------hcC
Confidence 56999999999999877655443 2211 12388899998764 3333333 222 223
Q ss_pred ccCCcchhHHHHh
Q 011283 467 TKDGSGIGAALLA 479 (489)
Q Consensus 467 a~Dgs~iGAA~~a 479 (489)
.......||.++|
T Consensus 158 ~~~~p~~GA~~lA 170 (171)
T d1zc6a2 158 PQGDSAQGALLLL 170 (171)
T ss_dssp CSSCHHHHHHHHT
T ss_pred CCCCHHHHHHHHh
Confidence 3456789998886
|
| >d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glycerol kinase domain: Glycerol kinase species: Enterococcus casseliflavus [TaxId: 37734]
Probab=96.31 E-value=0.00053 Score=63.53 Aligned_cols=62 Identities=15% Similarity=0.244 Sum_probs=43.3
Q ss_pred ccEEEEecCCcceEEEEEEeCCccceeeeccccccc--ccch-hhccChHHHHHHHHHhhhhHHHhhc
Q 011283 90 GLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVS--IPQE-LMCGTSEELFDFIATGLAKFAEKEA 154 (489)
Q Consensus 90 G~~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~--ip~~-~~~~~~~~lfd~Ia~~i~~~~~~~~ 154 (489)
.+|||||+|.|++|++++|..|+ ++.+.+..++ .|+. ....+++++++.+.+++++.+....
T Consensus 1 nyvlgiDiGTtsvKa~l~D~~g~---~~~~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~~~~~~~~~~ 65 (252)
T d1r59o1 1 NYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESG 65 (252)
T ss_dssp CEEEEEBCCSSBCBCCEECSSSC---BCCCCCCBCCCCCCSTTCCBCCGGGSSSTTTTTSHHHHTTTT
T ss_pred CEEEEEEecccceeeeEEeCCCC---EEEEEEEeCCceecCCCcEEECHHHHHHHHHHHHHHHhhhhh
Confidence 36899999999999999998764 5544433333 1221 2234688899889999988876554
|
| >d1zxoa2 c.55.1.5 (A:107-280) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hypothetical protein BT3618 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=94.88 E-value=0.01 Score=51.65 Aligned_cols=49 Identities=16% Similarity=0.054 Sum_probs=29.5
Q ss_pred eeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHH
Q 011283 389 IEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVT 451 (489)
Q Consensus 389 ~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~ 451 (489)
+.+|..|+++++..++..+. .+.+. +...|.+.|||.. .|.+.+++.++
T Consensus 101 d~~a~~ii~~~~~~l~~~~~---~~~~~--------~~~~v~~vGsva~---~~~~~l~~~l~ 149 (174)
T d1zxoa2 101 EPAIRQLVMNSFIAFFRRNV---MQYDY--------KQYPVHFIGSIAY---CYKEILQDAAR 149 (174)
T ss_dssp STTTTHHHHHHHHHHHTTTG---GGSCT--------TTSCEEECSHHHH---HTHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHH---HhcCC--------CCceEEEEccHHH---HHHHHHHHHHH
Confidence 58888889888776654322 22221 1123889999953 45566665544
|
| >d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hypothetical protein PG1100 species: Porphyromonas gingivalis [TaxId: 837]
Probab=94.82 E-value=0.037 Score=43.81 Aligned_cols=49 Identities=10% Similarity=-0.013 Sum_probs=28.9
Q ss_pred EEEEecCCcceEEEEEEeCCccceeeecccccccccchhhccChHHHHHHHHHhhh
Q 011283 92 FYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLA 147 (489)
Q Consensus 92 ~LaIDlGGTnlRv~lV~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~ 147 (489)
.|++|-|||+.+..+++ +|+ ++.+. ..-|.+....+.+++.+.|.+.+.
T Consensus 2 ilivDgGgTKT~~vl~d-~g~---~i~~~---~t~g~Np~~~~~~~~~~~l~~~~~ 50 (107)
T d1zbsa2 2 ILIGDSGSTKTDWCIAK-EGK---SLGRF---QTSGINPFQQDRNEIDTALRSEVL 50 (107)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEEE---EEECCCTTTSCHHHHHHHHTTTTH
T ss_pred EEEEEeccccEEEEEEC-CCC---eEEEE---ecCCcCcccCCHHHHHHHHHHHHH
Confidence 58999999999988777 554 33321 122333323345666666654443
|
| >d1zbsa1 c.55.1.5 (A:108-283) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hypothetical protein PG1100 species: Porphyromonas gingivalis [TaxId: 837]
Probab=94.10 E-value=0.014 Score=50.80 Aligned_cols=68 Identities=10% Similarity=0.061 Sum_probs=40.4
Q ss_pred eeeehhhhhhcCCccccchhhHHHHhhhccCCcccccceeEEEecCccccchhHHHHHHHHHHHHhhCcccccceEEEec
Q 011283 388 VIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLGTEISKNVVIEHT 467 (489)
Q Consensus 388 ~~~ia~~V~~RaA~l~aa~laaii~~~~~~~~~~~~~~~~~I~i~Gsv~~~~~~f~~~i~~~l~~~~~~~~~~~v~i~~a 467 (489)
.+.+|..|+++++..+...+. ..... . ..-|++.||+.. .|.+.+++.+++. .+++...
T Consensus 101 ~d~~a~~Ii~~aa~el~~~~~---~~~~~-~-------~~pv~l~Ggv~~---~~~~~l~~~l~~~-------~i~i~~i 159 (176)
T d1zbsa1 101 DIPAVYSLVQNSFDDFLVRNV---LRYNR-P-------DLPLHFIGSVAF---HYREVLSSVIKKR-------GLTLGSV 159 (176)
T ss_dssp TSHHHHHHHHHHHHHHHHHHT---GGGCC-T-------TSCEEEESHHHH---HTHHHHHHHHHHT-------TCCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHH---Hhccc-C-------CCeEEEECcHHH---HHHHHHHHHHHHc-------CCEeccc
Confidence 458999999999988754332 12221 1 123889999964 4666666666553 2444444
Q ss_pred cCCcchhHH
Q 011283 468 KDGSGIGAA 476 (489)
Q Consensus 468 ~Dgs~iGAA 476 (489)
..-.+-||.
T Consensus 160 ~~~Pi~Gav 168 (176)
T d1zbsa1 160 LQSPMEGLI 168 (176)
T ss_dssp ESCSHHHHH
T ss_pred cCCHhHHHH
Confidence 444667754
|
| >d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Heat shock protein 70kDa, ATPase fragment species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.93 E-value=0.11 Score=44.85 Aligned_cols=31 Identities=13% Similarity=0.217 Sum_probs=24.5
Q ss_pred chHHHHHHHHHHhcCcceEeeeeeccccccccc
Q 011283 200 KDVVACLNEAMERQGLDMRVSALVNDTVGTLAG 232 (489)
Q Consensus 200 ~dv~~lL~~al~~~~l~v~v~ai~NDtvatlla 232 (489)
..=.+.+.+|.+.-|+++ +.++|..+|++++
T Consensus 149 ~~qr~~~~~Aa~~AGl~~--~~li~EP~AAAl~ 179 (185)
T d1bupa1 149 DSQRQATKDAGTIAGLNV--LRIINEPTAAAIA 179 (185)
T ss_dssp HHHHHHHHHHHHHTTCEE--EEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCe--EEEEcCHHHHHHH
Confidence 345677888887778875 6899999999986
|
| >d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: Putative Holliday junction resolvase RuvX domain: Hypothetical protein, YqgF homologue species: Thermus thermophilus [TaxId: 274]
Probab=84.43 E-value=2.1 Score=32.70 Aligned_cols=20 Identities=25% Similarity=0.240 Sum_probs=16.8
Q ss_pred cEEEEecCCcceEEEEEEeC
Q 011283 91 LFYALDLGGTNFRVLRVQLG 110 (489)
Q Consensus 91 ~~LaIDlGGTnlRv~lV~l~ 110 (489)
++||||+|-..+=+|+-|-.
T Consensus 2 riLglD~G~kriGiAisd~~ 21 (98)
T d1iv0a_ 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEcCCCEEEEEEecCC
Confidence 58999999999999887643
|
| >d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: Putative Holliday junction resolvase RuvX domain: Hypothetical protein YqgF (RuvX) species: Escherichia coli [TaxId: 562]
Probab=84.37 E-value=0.85 Score=37.29 Aligned_cols=23 Identities=26% Similarity=0.238 Sum_probs=19.5
Q ss_pred cccEEEEecCCcceEEEEEEeCC
Q 011283 89 RGLFYALDLGGTNFRVLRVQLGG 111 (489)
Q Consensus 89 ~G~~LaIDlGGTnlRv~lV~l~g 111 (489)
.|++||||+|--.+=+|+-+..+
T Consensus 2 ~griLgiD~G~kriGvAvsd~~~ 24 (138)
T d1nu0a_ 2 SGTLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETTT
T ss_pred CCcEEEEEeCCCEEEEEEeCCCC
Confidence 48899999999999999877644
|