Citrus Sinensis ID: 011285


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
MPIRSSDFILLILFIAFSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLRKFAHSLKVKVSQNSSSLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKKFKIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPERRKFSKEEWERFTRDSTERALEGLVSSPDFSKWVAANAERITVTPRKTSADSSVCRRKWFLVF
cccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccccccEEEEEEEEEcccccccHHHHccEEEEEEEEcccccccccccccccccccccEEEEcccccccccccccEEEEEccccccEEEEEccccccEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEcccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccEEEccccccccHHHHHccccccc
ccccccHHEEHHHHHHHHHHHHHHHccccEEEEccccEEEcccccEcccccccccccEEEEEEEEEccccccccHHHHHHEEEEEEcccccccccccEEEEEEcccccccccccccHHHHcccccEEEEEcccccEEEEEEEcccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccEEEcccccccccccccccEEEcc
MPIRSSDFILLILFIAFSISQlvvsaddrslvvGQYTtlrlspglavenspgikpgaKVFCERVSIHGFSRLRDLRKFAHSLKVKvsqnssslrrsnvevcfhrnaslgvgmcsqgrwqkvskglwvqsmspfdhkildirtttspleplevsieeefFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGmkllptgrknSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEigigedmynPLAIFLVAFVVLAGAWLGFWVVRKLVLtedgsidistsnFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKKFKIVKNffrhsqlpdlspfqnscdeymykspedkfVWRWskrfslsscnsplqghsgssprklsdseiypsafhstperrkfSKEEWERFTRDSTERALeglvsspdfsKWVAANaeritvtprktsadssvcrrkwflvf
MPIRSSDFILLILFIAFSISQLVVSADDRSLVVGQYTTlrlspglavenspgikpGAKVFCERVSIHGFSRLRDLRKFAHSLkvkvsqnssslrrsnVEVCFHRNAslgvgmcsqgRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVssilrnftklrlLRRARKKFKIvknffrhsqlpdlspfqNSCDEYMYKSPEDKFVWRWSKRFSLsscnsplqghsgssprklsdSEIYpsafhstperrkfskeEWERFTRDSTEraleglvsspdfskWVAANaeritvtprktsadssvcrrkwflvf
MPIRssdfillilfiafsisqlVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLRKFAHSLKVKVSQNSSSLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTklrllrrarkkfkIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPERRKFSKEEWERFTRDSTERALEGLVSSPDFSKWVAANAERITVTPRKTSADSSVCRRKWFLVF
******DFILLILFIAFSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLRKFAHSLKVKV*********SNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKKFKIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKRFSL**************************************************************FSKWVAANAERITV**********VCRRKWFLV*
*****SD*ILLILFIAFSISQLVVSADDRSLVVGQYT*L******************KVFCERVSIHGFSRLRDLRKFAHSLKVKVSQNSSSLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKKFKI***************************************************************************************************VSSPDFSKWVAANAER****************RKWFLVF
MPIRSSDFILLILFIAFSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLRKFAHSL*************SNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKKFKIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKRFSLS******************DSEIYPSA************************RALEGLVSSPDFSKWVAANAERITVT*********VCRRKWFLVF
****SSDFILLILFIAFSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLRKFAHSLKVKVSQNSSSLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKK********************************************************************YPSAFHSTPERRKFSKEEWERFTRDSTERALEGLVSSPDFSKWVAANAERITVTPRK***********W****
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPIRSSDFILLILFIAFSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLRKFAHSLKVKVSQNSSSLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKKFKIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPERRKFSKEEWERFTRDSTERALEGLVSSPDFSKWVAANAERITVTPRKTSADSSVCRRKWFLVF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query489 2.2.26 [Sep-21-2011]
Q6ZQE4437 Transmembrane protein 194 yes no 0.505 0.565 0.238 0.0001
Q8CB65421 Transmembrane protein 194 no no 0.396 0.460 0.254 0.0004
A7MBC7445 Transmembrane protein 194 yes no 0.292 0.321 0.285 0.0008
>sp|Q6ZQE4|T194A_MOUSE Transmembrane protein 194A OS=Mus musculus GN=Tmem194a PE=1 SV=2 Back     alignment and function desciption
 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 67/314 (21%)

Query: 166 FILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSS 225
           F+LG+ L      LS+S +FYY + M+VGI+  +L+V+F   K +P          +Y  
Sbjct: 165 FLLGLTLFFCGDLLSRSQIFYYSTGMSVGIVASLLIVIFMISKFMPKRSP------IYVI 218

Query: 226 LIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTE 285
           L+G  SF L YL  L+   L EI      +     +L+++++  G ++ F V  K     
Sbjct: 219 LVGGWSFSL-YLIQLVFKNLQEI------WRSYWHYLLSYILTVG-FMSFAVCYKY---- 266

Query: 286 DGSIDISTS-NFVAWSIRILAVIMILQSSLDPLLAAEALVSGVL----------VSSILR 334
            G ++   S N + W++++L + ++  S   P +A   +V  +           + S  R
Sbjct: 267 -GPLENERSINLLTWTLQLLGLGLMYSSIQIPHVAFALIVIALCTKNLEYPIHWLCSTYR 325

Query: 335 NFTKL-------RLLRRARKKFKIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRW 387
              K        RLL    ++++I         L +L  F N        SPE    W+ 
Sbjct: 326 RMCKASGKPVPPRLL--TEEEYRIQGEVETQKALQELREFCN--------SPECS-AWKT 374

Query: 388 SKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPERRKFSKEEW---ERFTRDSTE 444
             R                SP++ +D      +FH TP      ++E+     FT+D   
Sbjct: 375 ISRI--------------QSPKRFAD--FVEGSFHLTPNEVSVHEQEYGLGSIFTQDEEL 418

Query: 445 RALEGLVSSPDFSK 458
            + E     P F++
Sbjct: 419 SSEEEGSEYPTFTQ 432





Mus musculus (taxid: 10090)
>sp|Q8CB65|T194B_MOUSE Transmembrane protein 194B OS=Mus musculus GN=Tmem194b PE=2 SV=3 Back     alignment and function description
>sp|A7MBC7|T194A_BOVIN Transmembrane protein 194A OS=Bos taurus GN=TMEM194A PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query489
255568621539 conserved hypothetical protein [Ricinus 0.895 0.812 0.651 1e-166
449463799 1058 PREDICTED: uncharacterized protein LOC10 0.907 0.419 0.577 1e-147
356495512491 PREDICTED: uncharacterized protein LOC10 0.920 0.916 0.614 1e-146
449501611544 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.938 0.843 0.561 1e-146
356540622491 PREDICTED: uncharacterized protein LOC10 0.973 0.969 0.580 1e-145
357482545485 Profilin [Medicago truncatula] gi|355512 0.973 0.981 0.587 1e-144
15240786486 uncharacterized protein [Arabidopsis tha 0.963 0.969 0.511 1e-130
147784037 607 hypothetical protein VITISV_002044 [Viti 0.817 0.658 0.518 1e-129
297794213486 hypothetical protein ARALYDRAFT_496834 [ 0.952 0.958 0.519 1e-128
79332807498 uncharacterized protein [Arabidopsis tha 0.903 0.887 0.530 1e-127
>gi|255568621|ref|XP_002525284.1| conserved hypothetical protein [Ricinus communis] gi|223535442|gb|EEF37112.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/474 (65%), Positives = 366/474 (77%), Gaps = 36/474 (7%)

Query: 5   SSDFILLILFIAFSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERV 64
           SS FI+ IL + FS    +VSA +RSLVVG+ + L+LSP L V  SPG KPG+ V CERV
Sbjct: 10  SSLFIIQILLLTFSFFCSIVSAQERSLVVGESSKLQLSPSLQVFKSPGTKPGSLVLCERV 69

Query: 65  SIHGFSRLRDLRKFAHSLKVKVSQNSSSLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKG 124
            IHG SRL++L+KF+H+LKV +S +SSSLRR NVEVCFHRNASL  GMC QG+W+KV KG
Sbjct: 70  YIHGLSRLKNLQKFSHTLKVTISHSSSSLRRPNVEVCFHRNASLATGMCPQGKWEKVDKG 129

Query: 125 LWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLV 184
            WV++MSPFDHKILD+R   S LE LE+SIEEEF+ YR++F ILGI+++++AS+LSKSL 
Sbjct: 130 PWVRAMSPFDHKILDVRMAGSSLENLELSIEEEFYLYRVIFLILGIVMLSVASALSKSLA 189

Query: 185 FYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSI 244
           FYY SAMA+GIILV L+VLFQGMKLLPTGRKNSLAIF+YSSL+GLGSFLLRY+PGLLRS+
Sbjct: 190 FYYSSAMAIGIILVTLVVLFQGMKLLPTGRKNSLAIFVYSSLVGLGSFLLRYVPGLLRSL 249

Query: 245 LTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRIL 304
           L EIGI EDMY PLAIFLVAFVVLAGAW+GFW VRKLVLTE+GS+DISTS FVAWSIRIL
Sbjct: 250 LVEIGISEDMYYPLAIFLVAFVVLAGAWMGFWAVRKLVLTEEGSVDISTSYFVAWSIRIL 309

Query: 305 AVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKKFKIVKNFFRHSQLPDL 364
            VIMILQSSLDPLLAAEAL+SG++VSSILR   +LR LRR                    
Sbjct: 310 GVIMILQSSLDPLLAAEALISGIVVSSILRRIFRLRFLRRM------------------- 350

Query: 365 SPFQNSCDEYMYKSPEDKFVWRWSKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHST 424
                 C   +Y           S R SL   +    G S +   +LSDS++YPS FH+T
Sbjct: 351 ------CKSAVY-----------SVRSSLHQLSVTPSGLSRTPQHQLSDSDVYPSTFHAT 393

Query: 425 PERRKFSKEEWERFTRDSTERALEGLVSSPDFSKWVAANAERITVTPRKTSADS 478
           PERRKFSK+ WE+FTRDST++A++ LVSSPDFSKWVAANAERITVTP+ TS  S
Sbjct: 394 PERRKFSKDAWEKFTRDSTQKAVKELVSSPDFSKWVAANAERITVTPKSTSTPS 447




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463799|ref|XP_004149619.1| PREDICTED: uncharacterized protein LOC101210632 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356495512|ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810145 [Glycine max] Back     alignment and taxonomy information
>gi|449501611|ref|XP_004161416.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228417 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356540622|ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795492 [Glycine max] Back     alignment and taxonomy information
>gi|357482545|ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|gb|AES94517.1| Profilin [Medicago truncatula] Back     alignment and taxonomy information
>gi|15240786|ref|NP_201562.1| uncharacterized protein [Arabidopsis thaliana] gi|9757882|dbj|BAB08469.1| unnamed protein product [Arabidopsis thaliana] gi|26452444|dbj|BAC43307.1| unknown protein [Arabidopsis thaliana] gi|28973425|gb|AAO64037.1| unknown protein [Arabidopsis thaliana] gi|332010983|gb|AED98366.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|147784037|emb|CAN70108.1| hypothetical protein VITISV_002044 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297794213|ref|XP_002864991.1| hypothetical protein ARALYDRAFT_496834 [Arabidopsis lyrata subsp. lyrata] gi|297310826|gb|EFH41250.1| hypothetical protein ARALYDRAFT_496834 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|79332807|ref|NP_001032168.1| uncharacterized protein [Arabidopsis thaliana] gi|332010984|gb|AED98367.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query489
TAIR|locus:2158641498 AT5G67610 "AT5G67610" [Arabido 0.916 0.899 0.526 2.2e-121
TAIR|locus:2018748476 AT1G28760 [Arabidopsis thalian 0.862 0.886 0.357 4.5e-66
MGI|MGI:2444113421 Tmem194b "transmembrane protei 0.226 0.263 0.265 7.8e-05
MGI|MGI:2446113437 Tmem194 "transmembrane protein 0.261 0.292 0.307 0.00044
WB|WBGene00017328559 F10C5.2 [Caenorhabditis elegan 0.226 0.198 0.268 0.0009
UNIPROTKB|A7MBC7445 TMEM194A "Transmembrane protei 0.237 0.260 0.312 0.00097
TAIR|locus:2158641 AT5G67610 "AT5G67610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
 Identities = 241/458 (52%), Positives = 321/458 (70%)

Query:    32 VVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLRKFAHSLKVKVSQNSS 91
             VVG+   L+++P L V+ SPG+KP     CER+ IHG  R + L K+AHSLK+ V+ + S
Sbjct:    48 VVGESGELQVTPSLEVKGSPGLKPDRTSLCERIHIHGLGRFKHLDKYAHSLKLIVNASIS 107

Query:    92 SLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLE 151
               + +N++VCFHRN S G+GMC   RW+K SKG WVQ+MSPFDHKILD+R  +S    LE
Sbjct:   108 G-KTNNIDVCFHRNLSRGIGMCPHSRWEKASKGSWVQTMSPFDHKILDVRVPSSNKVSLE 166

Query:   152 VSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLP 211
             VS  EE F +RIVF +LG +L+  AS+LS+SL FYY SAMAVGIILV+L+VLFQGMKLLP
Sbjct:   167 VSAVEELFMHRIVFLLLGAVLLASASTLSQSLAFYYSSAMAVGIILVVLLVLFQGMKLLP 226

Query:   212 TGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGA 271
             TGR +S A+F+YS+L+GLG FLLRYLPGL  S+LTE+GI E+MY P AIF+ AF+ L GA
Sbjct:   227 TGR-SSFALFIYSTLLGLGGFLLRYLPGLFESLLTEMGIDEEMYTPAAIFVGAFLSLGGA 285

Query:   272 WLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSS 331
             + GFW VRKL+LTEDGSID+STS FV+WSIRI+A ++ILQSS+DPLLA  AL+S +L+SS
Sbjct:   286 FFGFWTVRKLILTEDGSIDVSTSLFVSWSIRIMAAVLILQSSVDPLLAGGALISVILMSS 345

Query:   332 ILRNFTXXXXXXXXXXX-XXIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKR 390
              L+  T              ++   +   +  D+        ++M KSP D   +R   R
Sbjct:   346 TLKKITRLKFLLRLFEIPLNLLLGIWEAIRDTDIPSVPGYLHDFMQKSP-DASGFR--NR 402

Query:   391 FSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPERRKFSKEEWERFTRDSTERALEGL 450
              + +S +  +      SP   S+S+ +PS+FH TPER + +KEEW++ T+DST +A++ L
Sbjct:   403 VTSASPSGGINNGMRESPP--SESDTFPSSFHKTPERSQLTKEEWKKLTKDSTTKAVQEL 460

Query:   451 VSSPDFSKWVAANAERITVTPRKTSADSSVCRR--KWF 486
             VSSPDF KW A NA+RI VTPRK S+  +  R+  +WF
Sbjct:   461 VSSPDFGKWAAVNADRINVTPRKGSSSKNQPRKWMRWF 498




GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2018748 AT1G28760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:2444113 Tmem194b "transmembrane protein 194B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
MGI|MGI:2446113 Tmem194 "transmembrane protein 194" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
WB|WBGene00017328 F10C5.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|A7MBC7 TMEM194A "Transmembrane protein 194A" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00010583001
SubName- Full=Chromosome chr7 scaffold_270, whole genome shotgun sequence; (472 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query489
pfam10225248 pfam10225, DUF2215, Uncharacterized conserved prot 6e-49
>gnl|CDD|192487 pfam10225, DUF2215, Uncharacterized conserved protein (DUF2215) Back     alignment and domain information
 Score =  168 bits (427), Expect = 6e-49
 Identities = 89/279 (31%), Positives = 147/279 (52%), Gaps = 33/279 (11%)

Query: 150 LEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKL 209
             VS++EEF  +R+   ++G+IL  LA  LS+S++FYY S +A+G++  +L+V+FQ MKL
Sbjct: 1   YTVSLQEEFDLWRVFLLVVGLILFLLAPLLSRSVLFYYSSGIALGVLASLLLVVFQLMKL 60

Query: 210 LPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLA 269
           LP  RK+   + +Y    G+G +LL+ L   L+ IL E           AI+++ ++++ 
Sbjct: 61  LP--RKSGFYLTLYGGW-GVGLYLLQLLSMNLQLILVEY----------AIYVLGYLLIV 107

Query: 270 GAWLGFWVVRKLVLT-EDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVL 328
           GA      V   V   +  S+D  ++ FV W+++++A+ +ILQSSLDPLLA  AL+  +L
Sbjct: 108 GA------VSFFVCYKKGPSVDARSAQFVKWTLQLIALTLILQSSLDPLLATGALILALL 161

Query: 329 VSSILRNFTKLRLLRRARKKFKIVKNFFRHSQLPDLSP-FQNSCDEYMYKSPEDKFVWRW 387
              +L   + L+ L R     K  + F   S+       ++   +     S E+   +  
Sbjct: 162 TKFLLTPISWLKGLYR-----KYRRRFQPGSRRLLTEEEYEEQGEIETDSSLEELREYCN 216

Query: 388 SKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPE 426
           S   S     S L+     SPR+ +D      +FH TPE
Sbjct: 217 SPDCSPWKTFSRLR-----SPRRFAD--FVEGSFHLTPE 248


This entry is the central 200 residues of a family of proteins conserved from worms to humans. The function is unknown. Length = 248

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 489
KOG3817452 consensus Uncharacterized conserved protein [Funct 100.0
PF10225249 DUF2215: Uncharacterized conserved protein (DUF221 100.0
>KOG3817 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=1.9e-66  Score=523.37  Aligned_cols=330  Identities=25%  Similarity=0.357  Sum_probs=262.3

Q ss_pred             eeeecceeEEeCCCceeccCCC--CCCCCeeeeeeecccCcccccchhhheeeEE-EEEEeCCCC----CCCChhhhhhc
Q 011285           31 LVVGQYTTLRLSPGLAVENSPG--IKPGAKVFCERVSIHGFSRLRDLRKFAHSLK-VKVSQNSSS----LRRSNVEVCFH  103 (489)
Q Consensus        31 ~~~~~~~~~~l~p~~~v~~s~~--~~pg~~~~C~r~~~~G~~r~k~l~~~~~tv~-V~v~~ss~~----~~~~~~Evcqh  103 (489)
                      .-.-++++.+++||.++..+.-  +.+.+.+||+.++-+.+.      .++.++. +.+ .++|.    .|.+++||.||
T Consensus        16 y~ta~~dv~~~~~~q~~~v~ek~~s~q~~~t~~~~~k~~~I~------s~~~~~~~~~l-~~~dqy~~y~g~~~~ev~q~   88 (452)
T KOG3817|consen   16 YNTASSDVAYLTPGQYINVSEKILSLQTLRTFCYPGKRLTIS------SLFETVEFVLL-IGSDQYSQYGGKTPEEVLQH   88 (452)
T ss_pred             cCccccccccccchHHHHHHHHHHHHHHHHhhhcCcchhhHH------HHHHHHHHHHH-hcchHHHHhcCCCHHHHHHH
Confidence            3445567788999998765522  245567889888664443      2222211 112 33333    36799999999


Q ss_pred             cccccccccccccccccccCC--cEEEEeCCCCCceEEEEecCCCCcCeEEEEE-eeehhHHHHHHHHHHHHHhhhhccc
Q 011285          104 RNASLGVGMCSQGRWQKVSKG--LWVQSMSPFDHKILDIRTTTSPLEPLEVSIE-EEFFFYRIVFFILGIILMTLASSLS  180 (489)
Q Consensus       104 ~n~~~~~~~C~q~~W~~~~~~--~~~~~isPF~~~~igvr~~~~~~~~y~vsv~-~~~~~~rl~~fv~Gi~Lf~~A~~LS  180 (489)
                      +|+.       ++.++-..+.  ....++|||++.|+||    ++.++|++.+. +++|.||++.|++||+|||+|+.||
T Consensus        89 y~~~-------~s~f~i~l~a~~~~~~qlspf~~~~Vgi----s~~~~y~~~i~i~r~d~krflvfv~gi~Lff~ar~Ls  157 (452)
T KOG3817|consen   89 YKDK-------QSLFSITLFAQKRQLLQLSPFEQQCVGI----SSRQAYTVIINIIRLDLKRFLVFVVGILLFFSARRLS  157 (452)
T ss_pred             Hhhh-------HHHHHHHHHHHHHHhhcCCcccceEEee----eccCceEEEEEEEeccHHHHHHHHHHHHHHHHHHHhc
Confidence            9987       5455443332  2368999999999999    88899999996 8899999999999999999999999


Q ss_pred             CCceeeeechhHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccCCCCCchhhH
Q 011285          181 KSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAI  260 (489)
Q Consensus       181 rs~~FYYssG~slGVlaslLIllf~~~RllP~grks~~~ilmyG~~vg~g~~~~~yl~~~~~~iL~~~~~~e~~~~p~~~  260 (489)
                      ||++|||++||++||+||+|+++|+++|++||  |++    |||.++| ||+++.|+++++++||+++|+ |+     +.
T Consensus       158 rn~vFYYssG~v~GilaSLl~Viflv~rf~PK--kt~----~~~iliG-gWs~slY~i~ql~~nLq~Iwi-ey-----r~  224 (452)
T KOG3817|consen  158 RNSVFYYSSGIVIGILASLLVVIFLVARFFPK--KTM----MYGILIG-GWSISLYVIKQLADNLQLIWI-EY-----RD  224 (452)
T ss_pred             cCceEEEecccHHHHHHHHHHHHHHHHHhccc--ccc----eEEEEEc-cchhHHHHHHHHHHHHHHHHH-HH-----HH
Confidence            99999999999999999999999999999996  444    4555555 999999999999999999984 42     67


Q ss_pred             HHHHHHHhhhcceeeEEEEE-eccCCCCccccccchhhHHHHHHHHHHHHHhhccchHhHHHHHHHHHHHHHHHhhhhHH
Q 011285          261 FLVAFVVLAGAWLGFWVVRK-LVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKL  339 (489)
Q Consensus       261 ~vl~yv~~vG~~isF~vcyr-gpl~~~rSid~~t~~~v~W~Lqligl~LIy~ss~~~~~a~~Ali~~~l~~~~~~~~~~~  339 (489)
                      ||+||+++||+ |||+|||| |||+|+||+|+     ++|+||++|++|+|+|+|++++|+ |+|+..+|...+ .    
T Consensus       225 yvLgYvlivgl-iSfaVCYK~GPp~d~RS~~i-----lmWtLqli~lvl~Yfsvq~p~~a~-A~iI~~lc~~~l-~----  292 (452)
T KOG3817|consen  225 YVLGYVLIVGL-ISFAVCYKIGPPKDPRSQTI-----LMWTLQLIGLVLAYFSVQHPSAAI-AAIIMVLCFVAL-Y----  292 (452)
T ss_pred             HHHHHHHHHHH-HHHhhhhccCCCCCcchhhH-----HHHHHHHHHHHHHHHhcccHHHHH-HHHHHHHHHHHH-h----
Confidence            99999999997 99999999 99999999996     799999999999999999999999 666656665522 1    


Q ss_pred             HHHHHHHHhhhhhccccccCCCCCCCCCCCCcccccccCCCCcccccccccccCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 011285          340 RLLRRARKKFKIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPS  419 (489)
Q Consensus       340 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s  419 (489)
                                    +|++|.             .++     ..+++|+.                               
T Consensus       293 --------------~pIrw~-------------~~~-----~~kv~r~f-------------------------------  309 (452)
T KOG3817|consen  293 --------------FPIRWT-------------NQI-----KFKVRRRF-------------------------------  309 (452)
T ss_pred             --------------ccHHHH-------------HHH-----HHHHHhhc-------------------------------
Confidence                          334441             111     01224442                               


Q ss_pred             ccCCCCcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCCCCcchhccccceeecC
Q 011285          420 AFHSTPERRKFSKEEWERFTRDSTERALEGLV---SSPDFSKWVAANAERITVTP  471 (489)
Q Consensus       420 ~fh~~p~rR~LT~eEye~qg~~eT~kAL~EL~---~SPef~~W~~~na~Ri~~~p  471 (489)
                         ||-+||+|||||||+||+.||+|||+|||   ++|||++|+++  .||+...
T Consensus       310 ---kpl~rRlLtEeEYeeQaeveT~kaLaeLReycnkpd~~~Wkvv--grlrsp~  359 (452)
T KOG3817|consen  310 ---KPLKRRLLTEEEYEEQAEVETSKALAELREYCNKPDCKQWKVV--GRLRSPL  359 (452)
T ss_pred             ---cccchhhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh--hhccCHH
Confidence               37789999999999999999999999997   99999999999  9988643



>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query489
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.5 bits (112), Expect = 8e-06
 Identities = 75/538 (13%), Positives = 140/538 (26%), Gaps = 165/538 (30%)

Query: 17  FSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRD-L 75
           F +S +       S++   Y   R      + N    +  AK    R  +  + +LR  L
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDR----LYNDN--QVFAKYNVSR--LQPYLKLRQAL 144

Query: 76  RKFAHSLKV---------KVSQNSSSLRRSNVEVCFHRNAS-LGVGMCSQGRWQ-KVSKG 124
            +   +  V         K            V+         L +  C+      ++ + 
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204

Query: 125 LWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFF--YRIVFFIL------------GI 170
           L  Q    +  +          +  ++  +        Y     +L             +
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 171 ---ILMTLASSLSKSLVFYYGSAMAVGIILVILMVLF---QGMKL-----------LP-- 211
              IL+T   +  K +  +  +A    I L    +     +   L           LP  
Sbjct: 265 SCKILLT---TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 212 --TGRKNSLAIFMYSSLIG--LGSFLLRY----------LPGLLRSILTEIGIGE--DMY 255
             T   N   +    S+I   +   L  +          L  ++ S L  +   E   M+
Sbjct: 322 VLTT--NPRRL----SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375

Query: 256 NPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMIL---QS 312
           + L++F                             I T            ++ ++     
Sbjct: 376 DRLSVF----------------------PPS--AHIPT-----------ILLSLIWFDVI 400

Query: 313 SLDPLLAAEALVSGVLVSSILRNFTK------LRLLRRARKKF----KIVK--NFFRHSQ 360
             D ++    L    LV    +  T       L L  +   ++     IV   N  +   
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD 460

Query: 361 LPDLSPFQNSCDEYMY---------KSPEDKFV--------WRW--SK-RFSLSSCNSPL 400
             DL P     D+Y Y             ++          +R+   K R   ++ N+  
Sbjct: 461 SDDLIP--PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS- 517

Query: 401 QGHSGSSPRKLSDSEIYPSAF---HSTPERRKFSKEEWERFTRDSTERALEGLVSSPD 455
               GS    L   + Y           ER          F      +  E L+ S  
Sbjct: 518 ----GSILNTLQQLKFYKPYICDNDPKYERL---VNAILDFLP----KIEENLICSKY 564


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00