Citrus Sinensis ID: 011285
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 489 | ||||||
| 255568621 | 539 | conserved hypothetical protein [Ricinus | 0.895 | 0.812 | 0.651 | 1e-166 | |
| 449463799 | 1058 | PREDICTED: uncharacterized protein LOC10 | 0.907 | 0.419 | 0.577 | 1e-147 | |
| 356495512 | 491 | PREDICTED: uncharacterized protein LOC10 | 0.920 | 0.916 | 0.614 | 1e-146 | |
| 449501611 | 544 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.938 | 0.843 | 0.561 | 1e-146 | |
| 356540622 | 491 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.969 | 0.580 | 1e-145 | |
| 357482545 | 485 | Profilin [Medicago truncatula] gi|355512 | 0.973 | 0.981 | 0.587 | 1e-144 | |
| 15240786 | 486 | uncharacterized protein [Arabidopsis tha | 0.963 | 0.969 | 0.511 | 1e-130 | |
| 147784037 | 607 | hypothetical protein VITISV_002044 [Viti | 0.817 | 0.658 | 0.518 | 1e-129 | |
| 297794213 | 486 | hypothetical protein ARALYDRAFT_496834 [ | 0.952 | 0.958 | 0.519 | 1e-128 | |
| 79332807 | 498 | uncharacterized protein [Arabidopsis tha | 0.903 | 0.887 | 0.530 | 1e-127 |
| >gi|255568621|ref|XP_002525284.1| conserved hypothetical protein [Ricinus communis] gi|223535442|gb|EEF37112.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 309/474 (65%), Positives = 366/474 (77%), Gaps = 36/474 (7%)
Query: 5 SSDFILLILFIAFSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERV 64
SS FI+ IL + FS +VSA +RSLVVG+ + L+LSP L V SPG KPG+ V CERV
Sbjct: 10 SSLFIIQILLLTFSFFCSIVSAQERSLVVGESSKLQLSPSLQVFKSPGTKPGSLVLCERV 69
Query: 65 SIHGFSRLRDLRKFAHSLKVKVSQNSSSLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKG 124
IHG SRL++L+KF+H+LKV +S +SSSLRR NVEVCFHRNASL GMC QG+W+KV KG
Sbjct: 70 YIHGLSRLKNLQKFSHTLKVTISHSSSSLRRPNVEVCFHRNASLATGMCPQGKWEKVDKG 129
Query: 125 LWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLV 184
WV++MSPFDHKILD+R S LE LE+SIEEEF+ YR++F ILGI+++++AS+LSKSL
Sbjct: 130 PWVRAMSPFDHKILDVRMAGSSLENLELSIEEEFYLYRVIFLILGIVMLSVASALSKSLA 189
Query: 185 FYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSI 244
FYY SAMA+GIILV L+VLFQGMKLLPTGRKNSLAIF+YSSL+GLGSFLLRY+PGLLRS+
Sbjct: 190 FYYSSAMAIGIILVTLVVLFQGMKLLPTGRKNSLAIFVYSSLVGLGSFLLRYVPGLLRSL 249
Query: 245 LTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRIL 304
L EIGI EDMY PLAIFLVAFVVLAGAW+GFW VRKLVLTE+GS+DISTS FVAWSIRIL
Sbjct: 250 LVEIGISEDMYYPLAIFLVAFVVLAGAWMGFWAVRKLVLTEEGSVDISTSYFVAWSIRIL 309
Query: 305 AVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKLRLLRRARKKFKIVKNFFRHSQLPDL 364
VIMILQSSLDPLLAAEAL+SG++VSSILR +LR LRR
Sbjct: 310 GVIMILQSSLDPLLAAEALISGIVVSSILRRIFRLRFLRRM------------------- 350
Query: 365 SPFQNSCDEYMYKSPEDKFVWRWSKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHST 424
C +Y S R SL + G S + +LSDS++YPS FH+T
Sbjct: 351 ------CKSAVY-----------SVRSSLHQLSVTPSGLSRTPQHQLSDSDVYPSTFHAT 393
Query: 425 PERRKFSKEEWERFTRDSTERALEGLVSSPDFSKWVAANAERITVTPRKTSADS 478
PERRKFSK+ WE+FTRDST++A++ LVSSPDFSKWVAANAERITVTP+ TS S
Sbjct: 394 PERRKFSKDAWEKFTRDSTQKAVKELVSSPDFSKWVAANAERITVTPKSTSTPS 447
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449463799|ref|XP_004149619.1| PREDICTED: uncharacterized protein LOC101210632 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356495512|ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810145 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449501611|ref|XP_004161416.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228417 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356540622|ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795492 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357482545|ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|gb|AES94517.1| Profilin [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|15240786|ref|NP_201562.1| uncharacterized protein [Arabidopsis thaliana] gi|9757882|dbj|BAB08469.1| unnamed protein product [Arabidopsis thaliana] gi|26452444|dbj|BAC43307.1| unknown protein [Arabidopsis thaliana] gi|28973425|gb|AAO64037.1| unknown protein [Arabidopsis thaliana] gi|332010983|gb|AED98366.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|147784037|emb|CAN70108.1| hypothetical protein VITISV_002044 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297794213|ref|XP_002864991.1| hypothetical protein ARALYDRAFT_496834 [Arabidopsis lyrata subsp. lyrata] gi|297310826|gb|EFH41250.1| hypothetical protein ARALYDRAFT_496834 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|79332807|ref|NP_001032168.1| uncharacterized protein [Arabidopsis thaliana] gi|332010984|gb|AED98367.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 489 | ||||||
| TAIR|locus:2158641 | 498 | AT5G67610 "AT5G67610" [Arabido | 0.916 | 0.899 | 0.526 | 2.2e-121 | |
| TAIR|locus:2018748 | 476 | AT1G28760 [Arabidopsis thalian | 0.862 | 0.886 | 0.357 | 4.5e-66 | |
| MGI|MGI:2444113 | 421 | Tmem194b "transmembrane protei | 0.226 | 0.263 | 0.265 | 7.8e-05 | |
| MGI|MGI:2446113 | 437 | Tmem194 "transmembrane protein | 0.261 | 0.292 | 0.307 | 0.00044 | |
| WB|WBGene00017328 | 559 | F10C5.2 [Caenorhabditis elegan | 0.226 | 0.198 | 0.268 | 0.0009 | |
| UNIPROTKB|A7MBC7 | 445 | TMEM194A "Transmembrane protei | 0.237 | 0.260 | 0.312 | 0.00097 |
| TAIR|locus:2158641 AT5G67610 "AT5G67610" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 241/458 (52%), Positives = 321/458 (70%)
Query: 32 VVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLRKFAHSLKVKVSQNSS 91
VVG+ L+++P L V+ SPG+KP CER+ IHG R + L K+AHSLK+ V+ + S
Sbjct: 48 VVGESGELQVTPSLEVKGSPGLKPDRTSLCERIHIHGLGRFKHLDKYAHSLKLIVNASIS 107
Query: 92 SLRRSNVEVCFHRNASLGVGMCSQGRWQKVSKGLWVQSMSPFDHKILDIRTTTSPLEPLE 151
+ +N++VCFHRN S G+GMC RW+K SKG WVQ+MSPFDHKILD+R +S LE
Sbjct: 108 G-KTNNIDVCFHRNLSRGIGMCPHSRWEKASKGSWVQTMSPFDHKILDVRVPSSNKVSLE 166
Query: 152 VSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLP 211
VS EE F +RIVF +LG +L+ AS+LS+SL FYY SAMAVGIILV+L+VLFQGMKLLP
Sbjct: 167 VSAVEELFMHRIVFLLLGAVLLASASTLSQSLAFYYSSAMAVGIILVVLLVLFQGMKLLP 226
Query: 212 TGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGA 271
TGR +S A+F+YS+L+GLG FLLRYLPGL S+LTE+GI E+MY P AIF+ AF+ L GA
Sbjct: 227 TGR-SSFALFIYSTLLGLGGFLLRYLPGLFESLLTEMGIDEEMYTPAAIFVGAFLSLGGA 285
Query: 272 WLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSS 331
+ GFW VRKL+LTEDGSID+STS FV+WSIRI+A ++ILQSS+DPLLA AL+S +L+SS
Sbjct: 286 FFGFWTVRKLILTEDGSIDVSTSLFVSWSIRIMAAVLILQSSVDPLLAGGALISVILMSS 345
Query: 332 ILRNFTXXXXXXXXXXX-XXIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKR 390
L+ T ++ + + D+ ++M KSP D +R R
Sbjct: 346 TLKKITRLKFLLRLFEIPLNLLLGIWEAIRDTDIPSVPGYLHDFMQKSP-DASGFR--NR 402
Query: 391 FSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPERRKFSKEEWERFTRDSTERALEGL 450
+ +S + + SP S+S+ +PS+FH TPER + +KEEW++ T+DST +A++ L
Sbjct: 403 VTSASPSGGINNGMRESPP--SESDTFPSSFHKTPERSQLTKEEWKKLTKDSTTKAVQEL 460
Query: 451 VSSPDFSKWVAANAERITVTPRKTSADSSVCRR--KWF 486
VSSPDF KW A NA+RI VTPRK S+ + R+ +WF
Sbjct: 461 VSSPDFGKWAAVNADRINVTPRKGSSSKNQPRKWMRWF 498
|
|
| TAIR|locus:2018748 AT1G28760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2444113 Tmem194b "transmembrane protein 194B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2446113 Tmem194 "transmembrane protein 194" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00017328 F10C5.2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A7MBC7 TMEM194A "Transmembrane protein 194A" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00010583001 | SubName- Full=Chromosome chr7 scaffold_270, whole genome shotgun sequence; (472 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 489 | |||
| pfam10225 | 248 | pfam10225, DUF2215, Uncharacterized conserved prot | 6e-49 |
| >gnl|CDD|192487 pfam10225, DUF2215, Uncharacterized conserved protein (DUF2215) | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 6e-49
Identities = 89/279 (31%), Positives = 147/279 (52%), Gaps = 33/279 (11%)
Query: 150 LEVSIEEEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKL 209
VS++EEF +R+ ++G+IL LA LS+S++FYY S +A+G++ +L+V+FQ MKL
Sbjct: 1 YTVSLQEEFDLWRVFLLVVGLILFLLAPLLSRSVLFYYSSGIALGVLASLLLVVFQLMKL 60
Query: 210 LPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLA 269
LP RK+ + +Y G+G +LL+ L L+ IL E AI+++ ++++
Sbjct: 61 LP--RKSGFYLTLYGGW-GVGLYLLQLLSMNLQLILVEY----------AIYVLGYLLIV 107
Query: 270 GAWLGFWVVRKLVLT-EDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVL 328
GA V V + S+D ++ FV W+++++A+ +ILQSSLDPLLA AL+ +L
Sbjct: 108 GA------VSFFVCYKKGPSVDARSAQFVKWTLQLIALTLILQSSLDPLLATGALILALL 161
Query: 329 VSSILRNFTKLRLLRRARKKFKIVKNFFRHSQLPDLSP-FQNSCDEYMYKSPEDKFVWRW 387
+L + L+ L R K + F S+ ++ + S E+ +
Sbjct: 162 TKFLLTPISWLKGLYR-----KYRRRFQPGSRRLLTEEEYEEQGEIETDSSLEELREYCN 216
Query: 388 SKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPE 426
S S S L+ SPR+ +D +FH TPE
Sbjct: 217 SPDCSPWKTFSRLR-----SPRRFAD--FVEGSFHLTPE 248
|
This entry is the central 200 residues of a family of proteins conserved from worms to humans. The function is unknown. Length = 248 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 489 | |||
| KOG3817 | 452 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| PF10225 | 249 | DUF2215: Uncharacterized conserved protein (DUF221 | 100.0 |
| >KOG3817 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-66 Score=523.37 Aligned_cols=330 Identities=25% Similarity=0.357 Sum_probs=262.3
Q ss_pred eeeecceeEEeCCCceeccCCC--CCCCCeeeeeeecccCcccccchhhheeeEE-EEEEeCCCC----CCCChhhhhhc
Q 011285 31 LVVGQYTTLRLSPGLAVENSPG--IKPGAKVFCERVSIHGFSRLRDLRKFAHSLK-VKVSQNSSS----LRRSNVEVCFH 103 (489)
Q Consensus 31 ~~~~~~~~~~l~p~~~v~~s~~--~~pg~~~~C~r~~~~G~~r~k~l~~~~~tv~-V~v~~ss~~----~~~~~~Evcqh 103 (489)
.-.-++++.+++||.++..+.- +.+.+.+||+.++-+.+. .++.++. +.+ .++|. .|.+++||.||
T Consensus 16 y~ta~~dv~~~~~~q~~~v~ek~~s~q~~~t~~~~~k~~~I~------s~~~~~~~~~l-~~~dqy~~y~g~~~~ev~q~ 88 (452)
T KOG3817|consen 16 YNTASSDVAYLTPGQYINVSEKILSLQTLRTFCYPGKRLTIS------SLFETVEFVLL-IGSDQYSQYGGKTPEEVLQH 88 (452)
T ss_pred cCccccccccccchHHHHHHHHHHHHHHHHhhhcCcchhhHH------HHHHHHHHHHH-hcchHHHHhcCCCHHHHHHH
Confidence 3445567788999998765522 245567889888664443 2222211 112 33333 36799999999
Q ss_pred cccccccccccccccccccCC--cEEEEeCCCCCceEEEEecCCCCcCeEEEEE-eeehhHHHHHHHHHHHHHhhhhccc
Q 011285 104 RNASLGVGMCSQGRWQKVSKG--LWVQSMSPFDHKILDIRTTTSPLEPLEVSIE-EEFFFYRIVFFILGIILMTLASSLS 180 (489)
Q Consensus 104 ~n~~~~~~~C~q~~W~~~~~~--~~~~~isPF~~~~igvr~~~~~~~~y~vsv~-~~~~~~rl~~fv~Gi~Lf~~A~~LS 180 (489)
+|+. ++.++-..+. ....++|||++.|+|| ++.++|++.+. +++|.||++.|++||+|||+|+.||
T Consensus 89 y~~~-------~s~f~i~l~a~~~~~~qlspf~~~~Vgi----s~~~~y~~~i~i~r~d~krflvfv~gi~Lff~ar~Ls 157 (452)
T KOG3817|consen 89 YKDK-------QSLFSITLFAQKRQLLQLSPFEQQCVGI----SSRQAYTVIINIIRLDLKRFLVFVVGILLFFSARRLS 157 (452)
T ss_pred Hhhh-------HHHHHHHHHHHHHHhhcCCcccceEEee----eccCceEEEEEEEeccHHHHHHHHHHHHHHHHHHHhc
Confidence 9987 5455443332 2368999999999999 88899999996 8899999999999999999999999
Q ss_pred CCceeeeechhHHHHHHHHHHHHHHHhhhcCCCCcchHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccCCCCCchhhH
Q 011285 181 KSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAI 260 (489)
Q Consensus 181 rs~~FYYssG~slGVlaslLIllf~~~RllP~grks~~~ilmyG~~vg~g~~~~~yl~~~~~~iL~~~~~~e~~~~p~~~ 260 (489)
||++|||++||++||+||+|+++|+++|++|| |++ |||.++| ||+++.|+++++++||+++|+ |+ +.
T Consensus 158 rn~vFYYssG~v~GilaSLl~Viflv~rf~PK--kt~----~~~iliG-gWs~slY~i~ql~~nLq~Iwi-ey-----r~ 224 (452)
T KOG3817|consen 158 RNSVFYYSSGIVIGILASLLVVIFLVARFFPK--KTM----MYGILIG-GWSISLYVIKQLADNLQLIWI-EY-----RD 224 (452)
T ss_pred cCceEEEecccHHHHHHHHHHHHHHHHHhccc--ccc----eEEEEEc-cchhHHHHHHHHHHHHHHHHH-HH-----HH
Confidence 99999999999999999999999999999996 444 4555555 999999999999999999984 42 67
Q ss_pred HHHHHHHhhhcceeeEEEEE-eccCCCCccccccchhhHHHHHHHHHHHHHhhccchHhHHHHHHHHHHHHHHHhhhhHH
Q 011285 261 FLVAFVVLAGAWLGFWVVRK-LVLTEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALVSGVLVSSILRNFTKL 339 (489)
Q Consensus 261 ~vl~yv~~vG~~isF~vcyr-gpl~~~rSid~~t~~~v~W~Lqligl~LIy~ss~~~~~a~~Ali~~~l~~~~~~~~~~~ 339 (489)
||+||+++||+ |||+|||| |||+|+||+|+ ++|+||++|++|+|+|+|++++|+ |+|+..+|...+ .
T Consensus 225 yvLgYvlivgl-iSfaVCYK~GPp~d~RS~~i-----lmWtLqli~lvl~Yfsvq~p~~a~-A~iI~~lc~~~l-~---- 292 (452)
T KOG3817|consen 225 YVLGYVLIVGL-ISFAVCYKIGPPKDPRSQTI-----LMWTLQLIGLVLAYFSVQHPSAAI-AAIIMVLCFVAL-Y---- 292 (452)
T ss_pred HHHHHHHHHHH-HHHhhhhccCCCCCcchhhH-----HHHHHHHHHHHHHHHhcccHHHHH-HHHHHHHHHHHH-h----
Confidence 99999999997 99999999 99999999996 799999999999999999999999 666656665522 1
Q ss_pred HHHHHHHHhhhhhccccccCCCCCCCCCCCCcccccccCCCCcccccccccccCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 011285 340 RLLRRARKKFKIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRWSKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPS 419 (489)
Q Consensus 340 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~s 419 (489)
+|++|. .++ ..+++|+.
T Consensus 293 --------------~pIrw~-------------~~~-----~~kv~r~f------------------------------- 309 (452)
T KOG3817|consen 293 --------------FPIRWT-------------NQI-----KFKVRRRF------------------------------- 309 (452)
T ss_pred --------------ccHHHH-------------HHH-----HHHHHhhc-------------------------------
Confidence 334441 111 01224442
Q ss_pred ccCCCCcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCCCCcchhccccceeecC
Q 011285 420 AFHSTPERRKFSKEEWERFTRDSTERALEGLV---SSPDFSKWVAANAERITVTP 471 (489)
Q Consensus 420 ~fh~~p~rR~LT~eEye~qg~~eT~kAL~EL~---~SPef~~W~~~na~Ri~~~p 471 (489)
||-+||+|||||||+||+.||+|||+||| ++|||++|+++ .||+...
T Consensus 310 ---kpl~rRlLtEeEYeeQaeveT~kaLaeLReycnkpd~~~Wkvv--grlrsp~ 359 (452)
T KOG3817|consen 310 ---KPLKRRLLTEEEYEEQAEVETSKALAELREYCNKPDCKQWKVV--GRLRSPL 359 (452)
T ss_pred ---cccchhhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh--hhccCHH
Confidence 37789999999999999999999999997 99999999999 9988643
|
|
| >PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 489 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 8e-06
Identities = 75/538 (13%), Positives = 140/538 (26%), Gaps = 165/538 (30%)
Query: 17 FSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRD-L 75
F +S + S++ Y R + N + AK R + + +LR L
Sbjct: 93 FLMSPIKTEQRQPSMMTRMYIEQRDR----LYNDN--QVFAKYNVSR--LQPYLKLRQAL 144
Query: 76 RKFAHSLKV---------KVSQNSSSLRRSNVEVCFHRNAS-LGVGMCSQGRWQ-KVSKG 124
+ + V K V+ L + C+ ++ +
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204
Query: 125 LWVQSMSPFDHKILDIRTTTSPLEPLEVSIEEEFFF--YRIVFFIL------------GI 170
L Q + + + ++ + Y +L +
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264
Query: 171 ---ILMTLASSLSKSLVFYYGSAMAVGIILVILMVLF---QGMKL-----------LP-- 211
IL+T + K + + +A I L + + L LP
Sbjct: 265 SCKILLT---TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 212 --TGRKNSLAIFMYSSLIG--LGSFLLRY----------LPGLLRSILTEIGIGE--DMY 255
T N + S+I + L + L ++ S L + E M+
Sbjct: 322 VLTT--NPRRL----SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 256 NPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMIL---QS 312
+ L++F I T ++ ++
Sbjct: 376 DRLSVF----------------------PPS--AHIPT-----------ILLSLIWFDVI 400
Query: 313 SLDPLLAAEALVSGVLVSSILRNFTK------LRLLRRARKKF----KIVK--NFFRHSQ 360
D ++ L LV + T L L + ++ IV N +
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD 460
Query: 361 LPDLSPFQNSCDEYMY---------KSPEDKFV--------WRW--SK-RFSLSSCNSPL 400
DL P D+Y Y ++ +R+ K R ++ N+
Sbjct: 461 SDDLIP--PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS- 517
Query: 401 QGHSGSSPRKLSDSEIYPSAF---HSTPERRKFSKEEWERFTRDSTERALEGLVSSPD 455
GS L + Y ER F + E L+ S
Sbjct: 518 ----GSILNTLQQLKFYKPYICDNDPKYERL---VNAILDFLP----KIEENLICSKY 564
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00