Citrus Sinensis ID: 011288

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
MNISSVKFNHAGPITGPKWAGFRPTLHLRRNSDVVSFESRTKAGAAPSSLAVTANELPSQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK
ccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccEEEEEccccccEEEEcccccccccEEEEEccEEEEEEEccccccccccEEEEcccEEEcHHHHHHHHHHHHHccccccccEEEccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEcccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHcccHHHHcccccccccccccEEEEEEcccccEEEccccccHHcccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEcccccccccc
ccccEEEEccccccccccEcccccccccccccEEEEEEccccccccccHccccccHHHHHHHHcccEEEEEEccccccccHHHHHHHHccccEEEEccccccccEEEEEEccEEEEEccccccccccccEEEEcccccEcHHHHHHHHHHHHcccccHHHHEEEccccEEccHHHHHHHHHHHHHcHHHccccccccHHHHHHHHHHccccEHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcEccHHHHHHHHHHHcccEEEEccccHHHcccccccccccccccccHHHHHcccccHHHccEEEEEEEccEEEccccccccEcccHHHHHHHHHHccEccccccEcEEEcEEHHHHHHHHHHHcccEEEEEcHHHHccccEEEEEcEEEcccccEEccccccHHHHHHcEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccHHHEEEc
mnissvkfnhagpitgpkwagfrptlhlrrnsdvvsfesrtkagaapsslavtanelpsqiESLSQVSGvlgsqwgdegkGKLVDILAEHFDIVARcqgganaghtIYNAEGKKFALHlvpsgilnedtvcVIGNgvvvhlpglfneidgleangvsckgriLVSDRAHLLFDFHQEIDGLREAELAKSFIgttrrgigpaysskvirngirvcdlrhmdtfpQKLDLLLSDAaarfpglkytpdVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEggqatmldidfgtypfvtssspsaggictglgiaprVVGDLIGVVKAYTtrvgsgpfpteifgqggdrlrlagqefgtttgrprrcgwlDVVALKYCCqinglsslnltkldvlselpeiqlgvaykqfdgtpvksfpaDLLLLEQLKVEYevlpgwqsdissvrnysdlpkGAREFVERIEELVgvpinyigvgpgrdaliyk
mnissvkfnhagpitgpkwagfrpTLHLRRNSDVVSFESRTkagaapsslaVTANELPSQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSfigttrrgigpaysskviRNGIRVCDLRHMDTFPQKLDLLLSDAAArfpglkytpdvlREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYttrvgsgpfpteifgqggDRLRLAGQefgtttgrprrcgWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVlpgwqsdissvrnysdLPKGAREFVERIEelvgvpinyigvgpgrdaliyk
MNISSVKFNHAGPITGPKWAGFRPTLHLRRNSDVVSFESRTKAGAAPSSLAVTANELPSQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK
*************ITGPKWAGFRPTLHLR***************************************GVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALI**
*******************************************************************SGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELA**FIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIY*
MNISSVKFNHAGPITGPKWAGFRPTLHLRRNSDVVSFESRTKAGAAPSSLAVTANELPSQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK
*NISSVKFNHAGPITGPKWAGFRPTLHLRRNSDVVSFESR**********************SLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNISSVKFNHAGPITGPKWAGFRPTLHLRRNSDVVSFESRTKAGAAPSSLAVTANELPSQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query489 2.2.26 [Sep-21-2011]
B9SL58488 Adenylosuccinate syntheta N/A no 0.989 0.991 0.818 0.0
B9IJ21491 Adenylosuccinate syntheta yes no 0.985 0.981 0.809 0.0
A9XLE1508 Adenylosuccinate syntheta N/A no 0.881 0.848 0.883 0.0
Q96529490 Adenylosuccinate syntheta yes no 0.993 0.991 0.803 0.0
A9XLG1500 Adenylosuccinate syntheta N/A no 0.983 0.962 0.771 0.0
Q6T7E8505 Adenylosuccinate syntheta N/A no 0.991 0.960 0.764 0.0
A2XD35487 Adenylosuccinate syntheta N/A no 0.879 0.882 0.804 0.0
O24396476 Adenylosuccinate syntheta N/A no 0.879 0.903 0.811 0.0
Q10R17488 Adenylosuccinate syntheta yes no 0.879 0.881 0.804 0.0
C5WVW2490 Adenylosuccinate syntheta N/A no 0.891 0.889 0.788 0.0
>sp|B9SL58|PURA2_RICCO Adenylosuccinate synthetase 2, chloroplastic OS=Ricinus communis GN=PURA2 PE=3 SV=1 Back     alignment and function desciption
 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/486 (81%), Positives = 433/486 (89%), Gaps = 2/486 (0%)

Query: 4   SSVKFNHAGPITGPKWAGFRPTLHLRRNSDVVSFESRTKAGAAPSSLAVTANELPSQIES 63
           SS++ +   PIT PKW   +  L   RN  V S +S +      ++ + + + L S+I S
Sbjct: 5   SSLRLD-TNPITSPKWVHRQVPLRPHRNFVVCSIKSPSTPSLNLATDSASTDSL-SRINS 62

Query: 64  LSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSG 123
           LSQVSGVLG QWGDEGKGKLVDILA+HFDIVARCQGGANAGHTIYN+EGKKFALHLVPSG
Sbjct: 63  LSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSG 122

Query: 124 ILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLRE 183
           ILNEDT+CVIGNGVVVHLPGLF EIDGLE++GVSC GRILVSDRAHLLFDFHQE+DGLRE
Sbjct: 123 ILNEDTLCVIGNGVVVHLPGLFKEIDGLESSGVSCTGRILVSDRAHLLFDFHQEVDGLRE 182

Query: 184 AELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYT 243
           AELAKSFIGTTRRGIGP Y+SK IRNGIRV DLRHMDTFPQKLD+LLSDAA+RF G KY 
Sbjct: 183 AELAKSFIGTTRRGIGPCYASKAIRNGIRVSDLRHMDTFPQKLDILLSDAASRFQGFKYG 242

Query: 244 PDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVT 303
           P++LREEVEKYKR+AERLEPFI DTVH MNESI QK+KILVEGGQATMLDIDFGTYPFVT
Sbjct: 243 PEMLREEVEKYKRYAERLEPFIADTVHVMNESIEQKKKILVEGGQATMLDIDFGTYPFVT 302

Query: 304 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGT 363
           SSSPSAGGICTGLGIAPR VGDLIGVVKAYTTRVGSGPFPTEI GQGGD LR AGQEFGT
Sbjct: 303 SSSPSAGGICTGLGIAPRAVGDLIGVVKAYTTRVGSGPFPTEILGQGGDLLRFAGQEFGT 362

Query: 364 TTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFP 423
           TTGRPRRCGWLD+VALKYCCQING SSLNLTKLDVLS+LPEIQLGVAYK  DGTP KSFP
Sbjct: 363 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSDLPEIQLGVAYKHADGTPFKSFP 422

Query: 424 ADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGR 483
           ADL LLEQLKVEYEVLPGW+SDISS+RNY+D PK A+++VERIEELVGVP++YIGVGPGR
Sbjct: 423 ADLRLLEQLKVEYEVLPGWKSDISSIRNYADFPKAAQQYVERIEELVGVPVHYIGVGPGR 482

Query: 484 DALIYK 489
           DALIYK
Sbjct: 483 DALIYK 488
Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.
Ricinus communis (taxid: 3988)
EC: 6EC: .EC: 3EC: .EC: 4EC: .EC: 4
>sp|B9IJ21|PURA_POPTR Adenylosuccinate synthetase, chloroplastic OS=Populus trichocarpa GN=PURA PE=3 SV=1 Back     alignment and function description
>sp|A9XLE1|PURA1_CAPFR Adenylosuccinate synthetase 1, chloroplastic OS=Capsicum frutescens GN=PURA1 PE=3 SV=1 Back     alignment and function description
>sp|Q96529|PURA_ARATH Adenylosuccinate synthetase, chloroplastic OS=Arabidopsis thaliana GN=PURA PE=1 SV=1 Back     alignment and function description
>sp|A9XLG1|PURA_SOLBU Adenylosuccinate synthetase, chloroplastic OS=Solanum bulbocastanum GN=PURA PE=3 SV=1 Back     alignment and function description
>sp|Q6T7E8|PURA_TOBAC Adenylosuccinate synthetase, chloroplastic OS=Nicotiana tabacum GN=PURA PE=2 SV=1 Back     alignment and function description
>sp|A2XD35|PURA_ORYSI Adenylosuccinate synthetase, chloroplastic OS=Oryza sativa subsp. indica GN=PURA PE=3 SV=2 Back     alignment and function description
>sp|O24396|PURA_WHEAT Adenylosuccinate synthetase, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1 Back     alignment and function description
>sp|Q10R17|PURA1_ORYSJ Adenylosuccinate synthetase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PURA1 PE=2 SV=1 Back     alignment and function description
>sp|C5WVW2|PURA1_SORBI Adenylosuccinate synthetase 1, chloroplastic OS=Sorghum bicolor GN=PURA1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query489
255571562488 adenylosuccinate synthetase, putative [R 0.989 0.991 0.818 0.0
224140177491 predicted protein [Populus trichocarpa] 0.985 0.981 0.809 0.0
297820562490 adenylosuccinate synthetase [Arabidopsis 0.963 0.961 0.825 0.0
308191495508 RecName: Full=Adenylosuccinate synthetas 0.881 0.848 0.883 0.0
15230358490 adenylosuccinate synthetase [Arabidopsis 0.993 0.991 0.803 0.0
308154370500 RecName: Full=Adenylosuccinate synthetas 0.983 0.962 0.771 0.0
21537345490 adenylosuccinate synthetase [Arabidopsis 0.993 0.991 0.801 0.0
7546402443 Chain A, Structures Of Adenylosuccinate 0.891 0.984 0.873 0.0
75324707505 RecName: Full=Adenylosuccinate synthetas 0.991 0.960 0.764 0.0
356572048485 PREDICTED: adenylosuccinate synthetase 2 0.938 0.946 0.830 0.0
>gi|255571562|ref|XP_002526727.1| adenylosuccinate synthetase, putative [Ricinus communis] gi|308191503|sp|B9SL58.1|PURA2_RICCO RecName: Full=Adenylosuccinate synthetase 2, chloroplastic; Short=AMPSase 2; Short=AdSS 2; AltName: Full=IMP--aspartate ligase 2; Flags: Precursor gi|223533916|gb|EEF35641.1| adenylosuccinate synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/486 (81%), Positives = 433/486 (89%), Gaps = 2/486 (0%)

Query: 4   SSVKFNHAGPITGPKWAGFRPTLHLRRNSDVVSFESRTKAGAAPSSLAVTANELPSQIES 63
           SS++ +   PIT PKW   +  L   RN  V S +S +      ++ + + + L S+I S
Sbjct: 5   SSLRLD-TNPITSPKWVHRQVPLRPHRNFVVCSIKSPSTPSLNLATDSASTDSL-SRINS 62

Query: 64  LSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSG 123
           LSQVSGVLG QWGDEGKGKLVDILA+HFDIVARCQGGANAGHTIYN+EGKKFALHLVPSG
Sbjct: 63  LSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSG 122

Query: 124 ILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLRE 183
           ILNEDT+CVIGNGVVVHLPGLF EIDGLE++GVSC GRILVSDRAHLLFDFHQE+DGLRE
Sbjct: 123 ILNEDTLCVIGNGVVVHLPGLFKEIDGLESSGVSCTGRILVSDRAHLLFDFHQEVDGLRE 182

Query: 184 AELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYT 243
           AELAKSFIGTTRRGIGP Y+SK IRNGIRV DLRHMDTFPQKLD+LLSDAA+RF G KY 
Sbjct: 183 AELAKSFIGTTRRGIGPCYASKAIRNGIRVSDLRHMDTFPQKLDILLSDAASRFQGFKYG 242

Query: 244 PDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVT 303
           P++LREEVEKYKR+AERLEPFI DTVH MNESI QK+KILVEGGQATMLDIDFGTYPFVT
Sbjct: 243 PEMLREEVEKYKRYAERLEPFIADTVHVMNESIEQKKKILVEGGQATMLDIDFGTYPFVT 302

Query: 304 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGT 363
           SSSPSAGGICTGLGIAPR VGDLIGVVKAYTTRVGSGPFPTEI GQGGD LR AGQEFGT
Sbjct: 303 SSSPSAGGICTGLGIAPRAVGDLIGVVKAYTTRVGSGPFPTEILGQGGDLLRFAGQEFGT 362

Query: 364 TTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFP 423
           TTGRPRRCGWLD+VALKYCCQING SSLNLTKLDVLS+LPEIQLGVAYK  DGTP KSFP
Sbjct: 363 TTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSDLPEIQLGVAYKHADGTPFKSFP 422

Query: 424 ADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGR 483
           ADL LLEQLKVEYEVLPGW+SDISS+RNY+D PK A+++VERIEELVGVP++YIGVGPGR
Sbjct: 423 ADLRLLEQLKVEYEVLPGWKSDISSIRNYADFPKAAQQYVERIEELVGVPVHYIGVGPGR 482

Query: 484 DALIYK 489
           DALIYK
Sbjct: 483 DALIYK 488

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224140177|ref|XP_002323461.1| predicted protein [Populus trichocarpa] gi|308154366|sp|B9IJ21.1|PURA_POPTR RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=AdSS; AltName: Full=IMP--aspartate ligase; Flags: Precursor gi|222868091|gb|EEF05222.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297820562|ref|XP_002878164.1| adenylosuccinate synthetase [Arabidopsis lyrata subsp. lyrata] gi|297324002|gb|EFH54423.1| adenylosuccinate synthetase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|308191495|sp|A9XLE1.1|PURA1_CAPFR RecName: Full=Adenylosuccinate synthetase 1, chloroplastic; Short=AMPSase 1; Short=AdSS 1; AltName: Full=IMP--aspartate ligase 1; Flags: Precursor gi|156070771|gb|ABU45185.1| unknown [Capsicum frutescens] Back     alignment and taxonomy information
>gi|15230358|ref|NP_191320.1| adenylosuccinate synthetase [Arabidopsis thaliana] gi|2500026|sp|Q96529.1|PURA_ARATH RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=AdSS; AltName: Full=IMP--aspartate ligase; Flags: Precursor gi|1616657|gb|AAB16828.1| adenylosuccinate synthetase [Arabidopsis thaliana] gi|4678286|emb|CAB41194.1| adenylosuccinate synthetase [Arabidopsis thaliana] gi|15451052|gb|AAK96797.1| adenylosuccinate synthetase [Arabidopsis thaliana] gi|20148265|gb|AAM10023.1| adenylosuccinate synthetase [Arabidopsis thaliana] gi|332646157|gb|AEE79678.1| adenylosuccinate synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|308154370|sp|A9XLG1.1|PURA_SOLBU RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=AdSS; AltName: Full=IMP--aspartate ligase; Flags: Precursor gi|156070792|gb|ABU45204.1| unknown [Solanum bulbocastanum] Back     alignment and taxonomy information
>gi|21537345|gb|AAM61686.1| adenylosuccinate synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7546402|pdb|1DJ2|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana gi|7546403|pdb|1DJ2|B Chain B, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana Back     alignment and taxonomy information
>gi|75324707|sp|Q6T7E8.1|PURA_TOBAC RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=AdSS; AltName: Full=IMP--aspartate ligase; Flags: Precursor gi|37983671|gb|AAR06294.1| adenylosuccinate synthase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|356572048|ref|XP_003554182.1| PREDICTED: adenylosuccinate synthetase 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query489
TAIR|locus:2076606490 ADSS "adenylosuccinate synthas 0.993 0.991 0.805 2.4e-209
DICTYBASE|DDB_G0285429427 purA "adenylosuccinate synthet 0.844 0.967 0.582 1.5e-129
POMBASE|SPAC144.03434 ade2 "adenylosuccinate synthet 0.854 0.963 0.534 1.7e-121
CGD|CAL0005339428 ADE12 [Candida albicans (taxid 0.846 0.967 0.521 2.3e-117
FB|FBgn0027493447 CG17273 [Drosophila melanogast 0.856 0.937 0.515 7.9e-117
UNIPROTKB|A5PJR4457 ADSSL1 "Adenylosuccinate synth 0.905 0.969 0.503 1.3e-116
ZFIN|ZDB-GENE-040516-18456 adssl1 "adenylosuccinate synth 0.858 0.921 0.517 2.4e-115
UNIPROTKB|A4Z6H0457 ADSSL1 "Adenylosuccinate synth 0.905 0.969 0.501 8.2e-115
SGD|S000005164433 ADE12 "Adenylosuccinate syntha 0.854 0.965 0.506 8.2e-115
RGD|1590342457 Adssl1 "adenylosuccinate synth 0.905 0.969 0.492 1e-114
TAIR|locus:2076606 ADSS "adenylosuccinate synthase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2024 (717.5 bits), Expect = 2.4e-209, P = 2.4e-209
 Identities = 397/493 (80%), Positives = 436/493 (88%)

Query:     1 MNISSVKF--NHAGPITGPKWAGFRPTLHLRRNSDVVSFESRTKAGAAPSSLAV--TANE 56
             M++SS+    N    + GP    + P LH  R+   VS  ++  A +A  S+A    A E
Sbjct:     1 MSLSSLTLDSNPRFAVGGPYHRRY-PPLHHPRS--FVSCSAKRPAVSASLSVAADSAATE 57

Query:    57 LPSQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFA 116
                +I SLSQVSGVLG QWGDEGKGKLVDILA+HFDIVARCQGGANAGHTIYN+EGKKFA
Sbjct:    58 SLGRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFA 117

Query:   117 LHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQ 176
             LHLVPSGILNEDT CVIGNGVVVHLPGLF EIDGLE+NGVSCKGRILVSDRAHLLFDFHQ
Sbjct:   118 LHLVPSGILNEDTTCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILVSDRAHLLFDFHQ 177

Query:   177 EIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAAR 236
             E+DGLRE+ELAKSFIGTT+RGIGPAYSSKVIRNGIRV DLRHMDT PQKLDLLLSDAAAR
Sbjct:   178 EVDGLRESELAKSFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMDTLPQKLDLLLSDAAAR 237

Query:   237 FPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDF 296
             F G KYTP++LREEVE YKR+A+RLEP+ITDTVHF+N+SI+QK+K+LVEGGQATMLDIDF
Sbjct:   238 FQGFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLDIDF 297

Query:   297 GTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRL 356
             GTYPFVTSSSPSAGGICTGLGIAP VVGDLIGVVKAYTTRVGSGPFPTE  G GGD LRL
Sbjct:   298 GTYPFVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRL 357

Query:   357 AGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDG 416
             AGQEFGTTTGRPRRCGWLD+VALK+ CQING +SLNLTKLDVLS+L EIQLGVAYK+ DG
Sbjct:   358 AGQEFGTTTGRPRRCGWLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDG 417

Query:   417 TPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINY 476
             TPVKSFP DL LLE+L VEYEVLPGW+SDISSVRNYSDLPK A+++VERIEELVGVPI+Y
Sbjct:   418 TPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGVPIHY 477

Query:   477 IGVGPGRDALIYK 489
             IG+GPGRDALIYK
Sbjct:   478 IGIGPGRDALIYK 490
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0004019 "adenylosuccinate synthase activity" evidence=IEA;IGI;ISS
GO:0005525 "GTP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0006164 "purine nucleotide biosynthetic process" evidence=IEA;RCA
GO:0009152 "purine ribonucleotide biosynthetic process" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0048046 "apoplast" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009165 "nucleotide biosynthetic process" evidence=RCA
GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA
GO:0009536 "plastid" evidence=IDA
GO:0006167 "AMP biosynthetic process" evidence=IGI
DICTYBASE|DDB_G0285429 purA "adenylosuccinate synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPAC144.03 ade2 "adenylosuccinate synthetase Ade2" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
CGD|CAL0005339 ADE12 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
FB|FBgn0027493 CG17273 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJR4 ADSSL1 "Adenylosuccinate synthetase isozyme 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040516-18 adssl1 "adenylosuccinate synthase like 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A4Z6H0 ADSSL1 "Adenylosuccinate synthetase isozyme 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
SGD|S000005164 ADE12 "Adenylosuccinate synthase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
RGD|1590342 Adssl1 "adenylosuccinate synthase like 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6BUG5PURA_DEBHA6, ., 3, ., 4, ., 40.51050.84860.9673yesno
P0CQ35PURA_CRYNB6, ., 3, ., 4, ., 40.53790.84450.9604N/Ano
P0CQ34PURA_CRYNJ6, ., 3, ., 4, ., 40.53790.84450.9604yesno
Q6CQ65PURA_KLULA6, ., 3, ., 4, ., 40.52760.85480.9675yesno
B9SL58PURA2_RICCO6, ., 3, ., 4, ., 40.81890.98970.9918N/Ano
A9XLG1PURA_SOLBU6, ., 3, ., 4, ., 40.77160.98360.962N/Ano
O24396PURA_WHEAT6, ., 3, ., 4, ., 40.81160.87930.9033N/Ano
B9W8Y2PURA_CANDC6, ., 3, ., 4, ., 40.52100.84660.9672yesno
Q4P7R2PURA_USTMA6, ., 3, ., 4, ., 40.52870.87520.9749N/Ano
A8IW34PURA_CHLRE6, ., 3, ., 4, ., 40.61290.90380.9546N/Ano
A9XLE2PURA2_CAPFR6, ., 3, ., 4, ., 40.74451.00.9760N/Ano
P21900PURA_DICDI6, ., 3, ., 4, ., 40.57780.84860.9718yesno
A9XLE1PURA1_CAPFR6, ., 3, ., 4, ., 40.88390.88130.8484N/Ano
B4JUE4PURA_DROGR6, ., 3, ., 4, ., 40.50350.85680.9269N/Ano
A9SCV9PURA1_PHYPA6, ., 3, ., 4, ., 40.69240.87110.8287N/Ano
B6JUV1PURA_SCHJY6, ., 3, ., 4, ., 40.51750.86290.9723N/Ano
B7FUM7PURA_PHATC6, ., 3, ., 4, ., 40.49880.89770.8346yesno
O24578PURA_MAIZE6, ., 3, ., 4, ., 40.79300.87930.8884N/Ano
C5DD42PURA_LACTC6, ., 3, ., 4, ., 40.51150.85480.9631yesno
B3S0D3PURA_TRIAD6, ., 3, ., 4, ., 40.51590.87930.9728N/Ano
P0CH96PURA_CANAL6, ., 3, ., 4, ., 40.52100.84660.9672N/Ano
Q6FMU9PURA_CANGA6, ., 3, ., 4, ., 40.51380.85480.9675yesno
P0CH97PURA_CANAW6, ., 3, ., 4, ., 40.52100.84660.9672N/Ano
B0DQB9PURA1_LACBS6, ., 3, ., 4, ., 40.53620.85880.9813N/Ano
Q96529PURA_ARATH6, ., 3, ., 4, ., 40.80320.99380.9918yesno
C5MBF2PURA_CANTT6, ., 3, ., 4, ., 40.51520.84860.9696N/Ano
B3M343PURA_DROAN6, ., 3, ., 4, ., 40.50820.85680.9352N/Ano
Q299D3PURA_DROPS6, ., 3, ., 4, ., 40.50110.85680.9352yesno
A8NDT2PURA_COPC76, ., 3, ., 4, ., 40.55260.85880.9813N/Ano
C5WVW2PURA1_SORBI6, ., 3, ., 4, ., 40.78890.89160.8897N/Ano
A9TIK2PURA2_PHYPA6, ., 3, ., 4, ., 40.69950.87110.8287N/Ano
Q02787PURA_SCHPO6, ., 3, ., 4, ., 40.52950.85480.9631yesno
Q10R17PURA1_ORYSJ6, ., 3, ., 4, ., 40.80460.87930.8811yesno
Q9Y0Y2PURA_DROME6, ., 3, ., 4, ., 40.51050.85680.9373yesno
B4G518PURA_DROPE6, ., 3, ., 4, ., 40.50110.85680.9352N/Ano
Q017T9PURA_OSTTA6, ., 3, ., 4, ., 40.63800.85270.8615yesno
Q6T7E8PURA_TOBAC6, ., 3, ., 4, ., 40.76480.99180.9603N/Ano
C5WNV2PURA2_SORBI6, ., 3, ., 4, ., 40.77400.91410.9141N/Ano
A5DSZ3PURA_LODEL6, ., 3, ., 4, ., 40.52690.84860.9696N/Ano
B4II68PURA_DROSE6, ., 3, ., 4, ., 40.51050.85680.9373N/Ano
Q851S8PURA2_ORYSJ6, ., 3, ., 4, ., 40.77520.91000.9100nono
A3LYS9PURA_PICST6, ., 3, ., 4, ., 40.50580.84860.9651yesno
A4RYD2PURA_OSTLU6, ., 3, ., 4, ., 40.62850.85270.9742yesno
A2XD35PURA_ORYSI6, ., 3, ., 4, ., 40.80460.87930.8829N/Ano
A8Q0E3PURA_MALGO6, ., 3, ., 4, ., 40.51710.87320.9595N/Ano
B9IJ21PURA_POPTR6, ., 3, ., 4, ., 40.80920.98560.9816yesno
B4LWK0PURA_DROVI6, ., 3, ., 4, ., 40.50580.85680.9352N/Ano
C4R8E8PURA_PICPG6, ., 3, ., 4, ., 40.52220.84860.9696yesno
B4K8W7PURA_DROMO6, ., 3, ., 4, ., 40.50820.85680.9352N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.4.40.994
3rd Layer6.3.40.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query489
PLN02513427 PLN02513, PLN02513, adenylosuccinate synthase 0.0
smart00788417 smart00788, Adenylsucc_synt, Adenylosuccinate synt 0.0
pfam00709420 pfam00709, Adenylsucc_synt, Adenylosuccinate synth 0.0
cd03108363 cd03108, AdSS, Adenylosuccinate synthetase (AdSS) 0.0
PTZ00350436 PTZ00350, PTZ00350, adenylosuccinate synthetase; P 0.0
PRK01117430 PRK01117, PRK01117, adenylosuccinate synthetase; P 0.0
COG0104430 COG0104, PurA, Adenylosuccinate synthase [Nucleoti 0.0
TIGR00184425 TIGR00184, purA, adenylosuccinate synthase 1e-171
PRK13786424 PRK13786, PRK13786, adenylosuccinate synthetase; P 1e-133
PRK13787423 PRK13787, PRK13787, adenylosuccinate synthetase; P 1e-131
PRK13788404 PRK13788, PRK13788, adenylosuccinate synthetase; P 1e-128
PRK13783404 PRK13783, PRK13783, adenylosuccinate synthetase; P 1e-119
PRK13785454 PRK13785, PRK13785, adenylosuccinate synthetase; P 1e-109
PRK13784428 PRK13784, PRK13784, adenylosuccinate synthetase; P 1e-103
PRK04293333 PRK04293, PRK04293, adenylosuccinate synthetase; P 6e-76
PTZ00351710 PTZ00351, PTZ00351, adenylosuccinate synthetase; P 5e-16
PTZ00351710 PTZ00351, PTZ00351, adenylosuccinate synthetase; P 6e-05
>gnl|CDD|178129 PLN02513, PLN02513, adenylosuccinate synthase Back     alignment and domain information 
 Score =  877 bits (2267), Expect = 0.0
 Identities = 349/426 (81%), Positives = 382/426 (89%)

Query: 64  LSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSG 123
           LSQVS VLG+QWGDEGKGKLVDILA+HFDIVARCQGGANAGHTIYN EGKKFALHLVPSG
Sbjct: 1   LSQVSAVLGTQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNDEGKKFALHLVPSG 60

Query: 124 ILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLRE 183
           ILNE T CVIGNGVVVHLPGLF EIDGLE+NGVSC+GR+LVSDRAHLLFDFHQE+DGLRE
Sbjct: 61  ILNEKTTCVIGNGVVVHLPGLFEEIDGLESNGVSCEGRLLVSDRAHLLFDFHQEVDGLRE 120

Query: 184 AELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYT 243
           AELA S IGTT+RGIGPAYSSK  RNG+RV DLRHMDTF +KL  LL+DAAARF G +Y 
Sbjct: 121 AELAGSKIGTTKRGIGPAYSSKATRNGLRVGDLRHMDTFAEKLRELLADAAARFEGFEYD 180

Query: 244 PDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVT 303
             ++ EEVE YK+FAERLEPFITDTVH++NE+I   +KILVEG QATMLDIDFGTYPFVT
Sbjct: 181 ASMVEEEVEAYKKFAERLEPFITDTVHYLNEAIQAGKKILVEGAQATMLDIDFGTYPFVT 240

Query: 304 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGT 363
           SS+PSAGGICTGLGIAPR +GD+IGVVKAYTTRVGSGPFPTE+FG+ GD LR AGQEFGT
Sbjct: 241 SSNPSAGGICTGLGIAPRKLGDIIGVVKAYTTRVGSGPFPTELFGELGDLLREAGQEFGT 300

Query: 364 TTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFP 423
           TTGRPRRCGWLD+VALKY CQING +SLNLTKLDVLS LPEI++GVAYK  DG  VKSFP
Sbjct: 301 TTGRPRRCGWLDIVALKYSCQINGFTSLNLTKLDVLSGLPEIKIGVAYKTPDGKVVKSFP 360

Query: 424 ADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGR 483
           ADL  LEQ++V YEVLPGWQ DISSVRNY DLP  A+ +VERIEELVGVP++YIGVGPGR
Sbjct: 361 ADLDTLEQVEVVYEVLPGWQEDISSVRNYDDLPAAAQAYVERIEELVGVPVHYIGVGPGR 420

Query: 484 DALIYK 489
           DALI K
Sbjct: 421 DALIVK 426

Length = 427
>gnl|CDD|197875 smart00788, Adenylsucc_synt, Adenylosuccinate synthetase Back     alignment and domain information
>gnl|CDD|216073 pfam00709, Adenylsucc_synt, Adenylosuccinate synthetase Back     alignment and domain information
>gnl|CDD|239382 cd03108, AdSS, Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP Back     alignment and domain information
>gnl|CDD|240376 PTZ00350, PTZ00350, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|234904 PRK01117, PRK01117, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223182 COG0104, PurA, Adenylosuccinate synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|232863 TIGR00184, purA, adenylosuccinate synthase Back     alignment and domain information
>gnl|CDD|184325 PRK13786, PRK13786, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|172324 PRK13787, PRK13787, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|184326 PRK13788, PRK13788, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237505 PRK13783, PRK13783, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237506 PRK13785, PRK13785, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|172322 PRK13784, PRK13784, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|179812 PRK04293, PRK04293, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|173544 PTZ00351, PTZ00351, adenylosuccinate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|173544 PTZ00351, PTZ00351, adenylosuccinate synthetase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 489
COG0104430 PurA Adenylosuccinate synthase [Nucleotide transpo 100.0
TIGR00184425 purA adenylosuccinate synthase. Alternate name IMP 100.0
PLN02513427 adenylosuccinate synthase 100.0
PRK13786424 adenylosuccinate synthetase; Provisional 100.0
PRK13787423 adenylosuccinate synthetase; Provisional 100.0
PTZ00350436 adenylosuccinate synthetase; Provisional 100.0
PRK13784428 adenylosuccinate synthetase; Provisional 100.0
PRK01117430 adenylosuccinate synthetase; Provisional 100.0
smart00788421 Adenylsucc_synt Adenylosuccinate synthetase. Adeny 100.0
PRK13785454 adenylosuccinate synthetase; Provisional 100.0
PF00709421 Adenylsucc_synt: Adenylosuccinate synthetase; Inte 100.0
PRK13783404 adenylosuccinate synthetase; Provisional 100.0
PRK13788404 adenylosuccinate synthetase; Provisional 100.0
KOG1355455 consensus Adenylosuccinate synthase [Nucleotide tr 100.0
cd03108363 AdSS Adenylosuccinate synthetase (AdSS) catalyzes 100.0
PTZ00351710 adenylosuccinate synthetase; Provisional 100.0
PRK04293333 adenylosuccinate synthetase; Provisional 100.0
>COG0104 PurA Adenylosuccinate synthase [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.6e-166  Score=1268.51  Aligned_cols=421  Identities=51%  Similarity=0.887  Sum_probs=412.3

Q ss_pred             ceEEEEcCCCccCCchhhHhhhccCCCEEEecCCCCCCccEEEecCCeEEEEeecCceeecCCceeEecCCeEechHHHH
Q 011288           66 QVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLF  145 (489)
Q Consensus        66 ~~~vVvG~qwGDEGKGKivD~La~~~d~VVRfnGG~NAGHTVv~~~g~k~~lhliPSGil~~~~~~vIG~GvVvdp~~L~  145 (489)
                      +.+||||+|||||||||||||||.++|+|||||||+||||||+ ++|++|+|||||||+|+|++.|+|||||||||++|+
T Consensus         2 ~~~VVvG~QWGDEGKGKIvD~L~~~~d~VvR~qGG~NAGHTvv-v~g~~~~LhLiPSGil~~~~~~vIGnGvVvdP~~L~   80 (430)
T COG0104           2 MNVVVVGAQWGDEGKGKIVDYLADRADVVVRYQGGHNAGHTVV-VNGEKYKLHLIPSGILRPGATLVIGNGVVVDPEVLL   80 (430)
T ss_pred             ceEEEEeCccccCCCceeeeeeccCcCEEEEccCCCCCCcEEE-ECCEEEEEEeccccccCCCceEEEcCcEEECHHHHH
Confidence            5679999999999999999999999999999999999999999 999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCC-CCCeEEeCCccccchhHHHhHHHHHHHhcCCCCCCCCCcchhhhccccccCCCeEeeCCCCCcHHH
Q 011288          146 NEIDGLEANGVSC-KGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQ  224 (489)
Q Consensus       146 ~Ei~~L~~~Gi~~-~~rL~IS~rAhiv~p~H~~~D~~~E~~rg~~~iGTTgrGIGpay~dk~~R~giRv~DL~~~~~l~~  224 (489)
                      +|++.|+++|++. .+||+||+|||||+|||+++|+++|+.++.++||||||||||||+||++|.|||++||+|++.|++
T Consensus        81 ~Ei~~L~~~g~~~~~~rL~Is~~ahlIlpyH~~lD~~~E~~~~~~kIGTTgrGIGPaY~DKv~R~giRv~DL~d~~~l~~  160 (430)
T COG0104          81 KEIEELEERGVDVVRDRLRISDRAHLILPYHIELDRAREKALGKKKIGTTGRGIGPAYEDKVARRGIRVGDLLDPETLRE  160 (430)
T ss_pred             HHHHHHHhcCCccccccEEEccCcccccHHHHHHhhhhhhhcCCCcccCCCCccChhhhhhHhhhhhhhhhhcCHHHHHH
Confidence            9999999999974 379999999999999999999999988888899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccC-CCCCcccHHHHHHHHHHHHHHhCCCccChHHHHHHHHHCCCcEEEEeccchhhcccCCCCCccc
Q 011288          225 KLDLLLSDAAARFPG-LKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVT  303 (489)
Q Consensus       225 kL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~vLfEGAQG~LLDid~GtYP~VT  303 (489)
                      ||+.+++++|..+.+ ++.++.++++++++|.+++++++||++|+..+|++|+++||+||||||||+|||+|||||||||
T Consensus       161 kle~~~~~~n~~l~~~y~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~a~~~g~~VLfEGAQG~lLDidhGTYPyVT  240 (430)
T COG0104         161 KLERLLEYKNFQLVKYYGAEAVDFEDILDEYYEYAERLKPYVTDVSVLLNDALDAGKRVLFEGAQGTLLDIDHGTYPYVT  240 (430)
T ss_pred             HHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhcchhhhhHHHHHHHHHcCCeEEEEcCccceecccCCcCcccc
Confidence            999999999987775 5777788999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccccccCCCCcccCeEEEEEeecccccccCCCCCccCCCccchhhhccCCCCCCCCCCCccccchHHHHHHHH
Q 011288          304 SSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCC  383 (489)
Q Consensus       304 SSntta~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPfPTEl~~~~g~~lr~~g~E~GttTGRpRR~GwlDlv~lrya~  383 (489)
                      ||||+++++++|+|++|+.|++||||+|||+||||+||||||+++|.+++|++.|+|||+||||||||||||+|++|||+
T Consensus       241 SSNttagg~~~gsGvgP~~i~~ViGV~KAYtTRVG~GPFPTEl~de~ge~l~~~G~EyGttTGR~RRcGWfD~v~~r~A~  320 (430)
T COG0104         241 SSNTTAGGVATGSGVGPTKIDYVIGVFKAYTTRVGEGPFPTELFDEVGEKLREVGHEYGTTTGRPRRCGWFDAVLLRYAV  320 (430)
T ss_pred             cCCcchhheeccCCCCccccceEEEEEEEeeccccCCCCCcccchHHHHHHhhcCceecccCCCCccccchhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCcceEeeecccccCCCCCcEEEeeeecCCCcccccCCcChhhhccCeEEEEEcCCcccccccccCCCCCcHHHHHHH
Q 011288          384 QINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFV  463 (489)
Q Consensus       384 ~ing~~~lalTkLDvL~~~~~IkIcv~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~di~~~~~~~~LP~~a~~yi  463 (489)
                      ++||+|+|+|||||||++|++||||++|++ ||+++++||+++++|++|+||||+||||+++++++++|++||+||++||
T Consensus       321 ~iNG~t~laiTKlDvLdgl~~ikiCv~Y~~-dG~~id~~P~~~~~~~~~~PiYe~~pGW~~~~~g~~~~~~LP~~A~~Yi  399 (430)
T COG0104         321 RINGITGLAITKLDVLDGLDEIKICVAYEI-DGKRIDYFPADLDDLARCEPIYETLPGWSEDTTGVKSYDDLPENARKYI  399 (430)
T ss_pred             hhcCccceeeeeeehhcCCCcceeEEEEec-CCceeeecccchhhhhcCceeeeccCCCccccccccchHHcCHHHHHHH
Confidence            999999999999999999999999999996 9999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCeEEEeeCCCcccccc
Q 011288          464 ERIEELVGVPINYIGVGPGRDALIY  488 (489)
Q Consensus       464 ~~IE~~~gvpi~~isvGP~R~~~i~  488 (489)
                      ++|||++|+||.+||+||+|+|||.
T Consensus       400 ~~iEE~~gvPV~iistGP~R~~ti~  424 (430)
T COG0104         400 KRIEELVGVPVTIISTGPEREDTII  424 (430)
T ss_pred             HHHHHHHCCCEEEEecCCChhheEE
Confidence            9999999999999999999999985

>TIGR00184 purA adenylosuccinate synthase Back     alignment and domain information
>PLN02513 adenylosuccinate synthase Back     alignment and domain information
>PRK13786 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK13787 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PTZ00350 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK13784 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK01117 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>smart00788 Adenylsucc_synt Adenylosuccinate synthetase Back     alignment and domain information
>PRK13785 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PF00709 Adenylsucc_synt: Adenylosuccinate synthetase; InterPro: IPR001114 Adenylosuccinate synthetase (6 Back     alignment and domain information
>PRK13783 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK13788 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>KOG1355 consensus Adenylosuccinate synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd03108 AdSS Adenylosuccinate synthetase (AdSS) catalyzes the first step in the de novo biosynthesis of AMP Back     alignment and domain information
>PTZ00351 adenylosuccinate synthetase; Provisional Back     alignment and domain information
>PRK04293 adenylosuccinate synthetase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query489
1dj2_A443 Structures Of Adenylosuccinate Synthetase From Trit 0.0
1dj3_A442 Structures Of Adenylosuccinate Synthetase From Trit 0.0
1j4b_A457 Recombinant Mouse-muscle Adenylosuccinate Synthetas 1e-123
2v40_A459 Human Adenylosuccinate Synthetase Isozyme 2 In Comp 1e-118
3hid_A432 Crystal Structure Of Adenylosuccinate Synthetase Fr 1e-100
1p9b_A442 Structure Of Fully Ligated Adenylosuccinate Synthet 4e-99
1kjx_A432 Imp Complex Of E. Coli Adenylosuccinate Synthetase 9e-98
1cg0_A431 Structure Of Adenylosuccinate Synthetase From E. Co 1e-97
1hon_A431 Structure Of Guanine Nucleotide (Gppcp) Complex Of 1e-97
1cg1_A431 Structure Of The Mutant (K16q) Of Adenylosuccinate 2e-97
1cg3_A431 Structure Of The Mutant (R143l) Of Adenylosuccinate 8e-97
1cg4_A431 Structure Of The Mutant (R303l) Of Adenylosuccinate 8e-97
3r7t_A419 Crystal Structure Of Adenylosuccinate Synthetase Fr 2e-94
3ue9_A452 Crystal Structure Of Adenylosuccinate Synthetase (A 2e-86
2d7u_A339 Crystal Structure Of Hypothetical Adenylosuccinate 3e-50
>pdb|1DJ2|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana Length = 443 Back     alignment and structure 
Iteration: 1

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/436 (87%), Positives = 410/436 (94%)
Query: 54  ANELPSQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGK 113
           A E   +I SLSQVSGVLG QWGDEGKGKLVDILA+HFDIVARCQGGANAGHTIYN+EGK
Sbjct: 8   ATESLGRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGK 67
Query: 114 KFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFD 173
           KFALHLVPSGILNEDT CVIGNGVVVHLPGLF EIDGLE+NGVSCKGRILVSDRAHLLFD
Sbjct: 68  KFALHLVPSGILNEDTTCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILVSDRAHLLFD 127
Query: 174 FHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDA 233
           FHQE+DGLRE+ELAKSFIGTT+RGIGPAYSSKVIRNGIRV DLRHMDT PQKLDLLLSDA
Sbjct: 128 FHQEVDGLRESELAKSFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMDTLPQKLDLLLSDA 187
Query: 234 AARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLD 293
           AARF G KYTP++LREEVE YKR+A+RLEP+ITDTVHF+N+SI+QK+K+LVEGGQATMLD
Sbjct: 188 AARFQGFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLD 247
Query: 294 IDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDR 353
           IDFGTYPFVTSSSPSAGGICTGLGIAP VVGDLIGVVKAYTTRVGSGPFPTE  G GGD 
Sbjct: 248 IDFGTYPFVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDL 307
Query: 354 LRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQ 413
           LRLAGQEFGTTTGRPRRCGWLD+VALK+ CQING +SLNLTKLDVLS+L EIQLGVAYK+
Sbjct: 308 LRLAGQEFGTTTGRPRRCGWLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKR 367
Query: 414 FDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVP 473
            DGTPVKSFP DL LLE+L VEYEVLPGW+SDISSVRNYSDLPK A+++VERIEELVGVP
Sbjct: 368 SDGTPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGVP 427
Query: 474 INYIGVGPGRDALIYK 489
           I+YIG+GPGRDALIYK
Sbjct: 428 IHYIGIGPGRDALIYK 443
>pdb|1DJ3|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana Length = 442 Back     alignment and structure
>pdb|1J4B|A Chain A, Recombinant Mouse-muscle Adenylosuccinate Synthetase Length = 457 Back     alignment and structure
>pdb|2V40|A Chain A, Human Adenylosuccinate Synthetase Isozyme 2 In Complex With Gdp Length = 459 Back     alignment and structure
>pdb|3HID|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From Yersinia Pestis Co92 Length = 432 Back     alignment and structure
>pdb|1P9B|A Chain A, Structure Of Fully Ligated Adenylosuccinate Synthetase From Plasmodium Falciparum Length = 442 Back     alignment and structure
>pdb|1KJX|A Chain A, Imp Complex Of E. Coli Adenylosuccinate Synthetase Length = 432 Back     alignment and structure
>pdb|1CG0|A Chain A, Structure Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1HON|A Chain A, Structure Of Guanine Nucleotide (Gppcp) Complex Of Adenylosuccinate Synthetase From Escherichia Coli At Ph 6.5 And 25 Degree Celsius Length = 431 Back     alignment and structure
>pdb|1CG1|A Chain A, Structure Of The Mutant (K16q) Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1CG3|A Chain A, Structure Of The Mutant (R143l) Of Adenylosuccinate Synthetase From E. Coli Complexed With Hadacidin, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|1CG4|A Chain A, Structure Of The Mutant (R303l) Of Adenylosuccinate Synthetase From E. Coli Complexed With, Gdp, 6-Phosphoryl-Imp, And Mg2+ Length = 431 Back     alignment and structure
>pdb|3R7T|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From Campylobacter Jejuni Length = 419 Back     alignment and structure
>pdb|3UE9|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase (Ampsase) (Pura) From Burkholderia Thailandensis Length = 452 Back     alignment and structure
>pdb|2D7U|A Chain A, Crystal Structure Of Hypothetical Adenylosuccinate Synthetase, Ph0438 From Pyrococcus Horikoshii Ot3 Length = 339 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query489
1dj2_A443 Adenylosuccinate synthetase; GDP, ligase; HET: GDP 0.0
2v40_A459 Adenylosuccinate synthetase isozyme 2; ligase, pur 0.0
1p9b_A442 Adenylosuccinate synthetase; ligase; HET: IMO GDP; 0.0
3hid_A432 Adenylosuccinate synthetase; niaid structural geno 0.0
3r7t_A419 Adenylosuccinate synthetase; structural genomics, 0.0
3ue9_A452 Adenylosuccinate synthetase; ssgcid, ligase, ADSS, 0.0
2d7u_A339 Adenylosuccinate synthetase; structural genomics, 1e-172
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>1dj2_A Adenylosuccinate synthetase; GDP, ligase; HET: GDP; 2.90A {Arabidopsis thaliana} SCOP: c.37.1.10 PDB: 1dj3_A* Length = 443 Back     alignment and structure
 Score =  748 bits (1934), Expect = 0.0
 Identities = 379/431 (87%), Positives = 408/431 (94%)

Query: 59  SQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALH 118
            +I SLSQVSGVLG QWGDEGKGKLVDILA+HFDIVARCQGGANAGHTIYN+EGKKFALH
Sbjct: 13  GRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALH 72

Query: 119 LVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEI 178
           LVPSGILNEDT CVIGNGVVVHLPGLF EIDGLE+NGVSCKGRILVSDRAHLLFDFHQE+
Sbjct: 73  LVPSGILNEDTTCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILVSDRAHLLFDFHQEV 132

Query: 179 DGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFP 238
           DGLRE+ELAKSFIGTT+RGIGPAYSSKVIRNGIRV DLRHMDT PQKLDLLLSDAAARF 
Sbjct: 133 DGLRESELAKSFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMDTLPQKLDLLLSDAAARFQ 192

Query: 239 GLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGT 298
           G KYTP++LREEVE YKR+A+RLEP+ITDTVHF+N+SI+QK+K+LVEGGQATMLDIDFGT
Sbjct: 193 GFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLDIDFGT 252

Query: 299 YPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAG 358
           YPFVTSSSPSAGGICTGLGIAP VVGDLIGVVKAYTTRVGSGPFPTE  G GGD LRLAG
Sbjct: 253 YPFVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAG 312

Query: 359 QEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTP 418
           QEFGTTTGRPRRCGWLD+VALK+ CQING +SLNLTKLDVLS+L EIQLGVAYK+ DGTP
Sbjct: 313 QEFGTTTGRPRRCGWLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTP 372

Query: 419 VKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIG 478
           VKSFP DL LLE+L VEYEVLPGW+SDISSVRNYSDLPK A+++VERIEELVGVPI+YIG
Sbjct: 373 VKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGVPIHYIG 432

Query: 479 VGPGRDALIYK 489
           +GPGRDALIYK
Sbjct: 433 IGPGRDALIYK 443
>2v40_A Adenylosuccinate synthetase isozyme 2; ligase, purine biosynthesis, metal- binding, purine metabolism, nucleotide-binding, GDP, ADSS2, magnesium; HET: GDP; 1.9A {Homo sapiens} PDB: 1iwe_A* 1j4b_A 1lny_A* 1lon_A* 1loo_A* 1mez_A* 1mf0_A* 1mf1_A* 2dgn_A* Length = 459 Back     alignment and structure
>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A {Plasmodium falciparum} SCOP: c.37.1.10 Length = 442 Back     alignment and structure
>3hid_A Adenylosuccinate synthetase; niaid structural genomics, virulence associated factor, PURA, purine ribonucleotide biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92} PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A* 1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A* 1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A* ... Length = 432 Back     alignment and structure
>3r7t_A Adenylosuccinate synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: CIT PGE; 2.30A {Campylobacter jejuni} Length = 419 Back     alignment and structure
>3ue9_A Adenylosuccinate synthetase; ssgcid, ligase, ADSS, BTH_I2245, IMP-aspartate ligase, struc genomics; 1.95A {Burkholderia thailandensis} Length = 452 Back     alignment and structure
>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved hypothetical protein, NPPSFA; 2.50A {Pyrococcus horikoshii} Length = 339 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query489
1dj2_A443 Adenylosuccinate synthetase; GDP, ligase; HET: GDP 100.0
3hid_A432 Adenylosuccinate synthetase; niaid structural geno 100.0
3ue9_A452 Adenylosuccinate synthetase; ssgcid, ligase, ADSS, 100.0
2v40_A459 Adenylosuccinate synthetase isozyme 2; ligase, pur 100.0
1p9b_A442 Adenylosuccinate synthetase; ligase; HET: IMO GDP; 100.0
3r7t_A419 Adenylosuccinate synthetase; structural genomics, 100.0
2d7u_A339 Adenylosuccinate synthetase; structural genomics, 100.0
>1dj2_A Adenylosuccinate synthetase; GDP, ligase; HET: GDP; 2.90A {Arabidopsis thaliana} SCOP: c.37.1.10 PDB: 1dj3_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-169  Score=1313.27  Aligned_cols=437  Identities=87%  Similarity=1.383  Sum_probs=420.5

Q ss_pred             cccCCccccccCCceEEEEcCCCccCCchhhHhhhccCCCEEEecCCCCCCccEEEecCCeEEEEeecCceeecCCceeE
Q 011288           53 TANELPSQIESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCV  132 (489)
Q Consensus        53 ~~~~~~~~~~~~~~~~vVvG~qwGDEGKGKivD~La~~~d~VVRfnGG~NAGHTVv~~~g~k~~lhliPSGil~~~~~~v  132 (489)
                      ++.+++.|+..+++++||||+|||||||||||||||+++|+|||||||+||||||++++|+||+|||||||||||+++|+
T Consensus         7 ~~~~~~~~~~~~~~v~vVvG~QWGDEGKGKivD~La~~~dvVvR~qGG~NAGHTVv~~~g~k~~lhliPSGil~~~~~~v   86 (443)
T 1dj2_A            7 AATESLGRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTTCV   86 (443)
T ss_dssp             --------CTTSCSEEEEEESSSSCSSHHHHHHHHGGGCSEEEECSCCTTCCEEEECSSCCEEEESSSCGGGGSTTCEEE
T ss_pred             CCCCCCCCCCCccceEEEEeCCcCCCCCceEEeeeccCCCEEEecCccCCCCcEEEEeCCEEEEEEccCccccCCCceEE
Confidence            44577888888888999999999999999999999999999999999999999999899999999999999999999999


Q ss_pred             ecCCeEechHHHHHHHHHHHHCCCCCCCCeEEeCCccccchhHHHhHHHHHHHhcCCCCCCCCCcchhhhccccccCCCe
Q 011288          133 IGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIR  212 (489)
Q Consensus       133 IG~GvVvdp~~L~~Ei~~L~~~Gi~~~~rL~IS~rAhiv~p~H~~~D~~~E~~rg~~~iGTTgrGIGpay~dk~~R~giR  212 (489)
                      |||||||||+.|++||+.|+++|+++.+||+||+|||||||||+++|+++|.+++.++||||||||||||+||++|.|||
T Consensus        87 IGnGvVvdp~~L~~Ei~~L~~~G~~v~~rL~Is~rahli~p~H~~lD~~~E~~~g~~~IGTTgrGIGPaY~dK~~R~giR  166 (443)
T 1dj2_A           87 IGNGVVVHLPGLFKEIDGLESNGVSCKGRILVSDRAHLLFDFHQEVDGLRESELAKSFIGTTKRGIGPAYSSKVIRNGIR  166 (443)
T ss_dssp             ECTTCEECHHHHHHHHHHHHTTTCCCTTTEEEESSSEECCHHHHHHHHHHHHHSCSCCCCCCSCCHHHHHHHHHHTCCCB
T ss_pred             ECCcEEEcHHHHHHHHHHHHHcCCCCCCCEEEcCCCCCCCchHHHHHHHHHHhcCCCCCCCCCCCcHHHhHhhhhccCcE
Confidence            99999999999999999999999877799999999999999999999999999998999999999999999999999999


Q ss_pred             EeeCCCCCcHHHHHHHHHHHHHhhccCCCCCcccHHHHHHHHHHHHHHhCCCccChHHHHHHHHHCCCcEEEEeccchhh
Q 011288          213 VCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATML  292 (489)
Q Consensus       213 v~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~vLfEGAQG~LL  292 (489)
                      ++||+|++.|++||+.++++++.++..+..++.++++++++|++|+++|+|||+|+..+|++++++||+||||||||+||
T Consensus       167 v~DL~d~~~~~~kl~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~vLfEGAQG~lL  246 (443)
T 1dj2_A          167 VGDLRHMDTLPQKLDLLLSDAAARFQGFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATML  246 (443)
T ss_dssp             GGGGGCTTTHHHHHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHTTTEECHHHHHHHHHHTTCCEEEEEEEEGGG
T ss_pred             eecccCHHHHHHHHHHHHHHHHHHHHHhccCcCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCeEEEEecchhhh
Confidence            99999999999999999999999998865555789999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCcccCCCCcccccccccCCCCcccCeEEEEEeecccccccCCCCCccCCCccchhhhccCCCCCCCCCCCccc
Q 011288          293 DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCG  372 (489)
Q Consensus       293 Did~GtYP~VTSSntta~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPfPTEl~~~~g~~lr~~g~E~GttTGRpRR~G  372 (489)
                      |+|||||||||||||+++|+|+|+|++|+.|++||||+|||+||||+||||||++++.|+.||+.|+|||+|||||||||
T Consensus       247 DiD~GtYPyVTSSnttagga~~G~Gi~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~l~~~G~E~GttTGR~RRcG  326 (443)
T 1dj2_A          247 DIDFGTYPFVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQEFGTTTGRPRRCG  326 (443)
T ss_dssp             CTTTSSTTSSCSSCCSTHHHHHTTTCCTTTCCCEEEEEESEEEESSSSCCTTBCCSHHHHHHHHHHTCBCTTTCCBCEEE
T ss_pred             hhccCcCcCCCCCcchHhhhhhccCCCcccCCeEEEEEEecCCcccCCCCCCcCCchhhHHhhhcCCeeCCCCCCCccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhcCcceEeeecccccCCCCCcEEEeeeecCCCcccccCCcChhhhccCeEEEEEcCCcccccccccCC
Q 011288          373 WLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNY  452 (489)
Q Consensus       373 wlDlv~lrya~~ing~~~lalTkLDvL~~~~~IkIcv~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~di~~~~~~  452 (489)
                      |||+|++|||+++||+|+|+||||||||+|++||||++|++++|+++++||++++.|++|+||||+||||++|++++|+|
T Consensus       327 WfD~v~lrya~~inG~t~lalTkLDvLd~~~~ikicv~Y~~~~G~~~~~~P~~~~~l~~~~PvYe~~pGW~~~~~~~r~~  406 (443)
T 1dj2_A          327 WLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNY  406 (443)
T ss_dssp             EEEHHHHHHHHHHHTCSEEEEECGGGGGGCSEEEEEEEEECSSSCBCCSCCSCHHHHHHCEEEEEEEECCCSCCTTCCSS
T ss_pred             cchHHHHHHHHHHcCCCeEEEECcCcCCCCCceeEEEEEEcCCCeEeeeCCCChHHhccceEEEEECCCCCcccccCcch
Confidence            99999999999999999999999999999999999999999899999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHHHHhCCCeEEEeeCCCccccccC
Q 011288          453 SDLPKGAREFVERIEELVGVPINYIGVGPGRDALIYK  489 (489)
Q Consensus       453 ~~LP~~a~~yi~~IE~~~gvpi~~isvGP~R~~~i~~  489 (489)
                      ++||+|||+||++||+++|+||.|||+||+|+|||.|
T Consensus       407 ~~LP~~a~~Yi~~iEe~~gvpv~~is~GP~R~~ti~r  443 (443)
T 1dj2_A          407 SDLPKAAQQYVERIEELVGVPIHYIGIGPGRDALIYK  443 (443)
T ss_dssp             TTSCHHHHHHHHHHHHHHCSCEEEEECSSSSSCEEEC
T ss_pred             hhCCHHHHHHHHHHHHHHCCCEEEEEeCCCHHHeecC
Confidence            9999999999999999999999999999999999976
>3hid_A Adenylosuccinate synthetase; niaid structural genomics, virulence associated factor, PURA, purine ribonucleotide biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92} SCOP: c.37.1.10 PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A* 1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A* 1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A* ... Back     alignment and structure
>3ue9_A Adenylosuccinate synthetase; ssgcid, ligase, ADSS, BTH_I2245, IMP-aspartate ligase, struc genomics; 1.95A {Burkholderia thailandensis} Back     alignment and structure
>2v40_A Adenylosuccinate synthetase isozyme 2; ligase, purine biosynthesis, metal- binding, purine metabolism, nucleotide-binding, GDP, ADSS2, magnesium; HET: GDP; 1.9A {Homo sapiens} PDB: 1iwe_A* 1j4b_A 1lny_A* 1lon_A* 1loo_A* 1mez_A* 1mf0_A* 1mf1_A* 2dgn_A* Back     alignment and structure
>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A {Plasmodium falciparum} SCOP: c.37.1.10 Back     alignment and structure
>3r7t_A Adenylosuccinate synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: CIT PGE; 2.30A {Campylobacter jejuni} SCOP: c.37.1.0 Back     alignment and structure
>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved hypothetical protein, NPPSFA; 2.50A {Pyrococcus horikoshii} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 489
d1dj2a_429 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 1e-164
d1qf5a_431 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 1e-155
d1p9ba_424 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 1e-146
d1iwea_430 c.37.1.10 (A:) Adenylosuccinate synthetase, PurA { 1e-145
>d1dj2a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 429 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Adenylosuccinate synthetase, PurA
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  469 bits (1207), Expect = e-164
 Identities = 379/429 (88%), Positives = 407/429 (94%)

Query: 61  IESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLV 120
           I SLSQVSGVLG QWGDEGKGKLVDILA+HFDIVARCQGGANAGHTIYN+EGKKFALHLV
Sbjct: 1   IGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLV 60

Query: 121 PSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDG 180
           PSGILNEDT CVIGNGVVVHLPGLF EIDGLE+NGVSCKGRILVSDRAHLLFDFHQE+DG
Sbjct: 61  PSGILNEDTTCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILVSDRAHLLFDFHQEVDG 120

Query: 181 LREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGL 240
           LRE+ELAKSFIGTT+RGIGPAYSSKVIRNGIRV DLRHMDT PQKLDLLLSDAAARF G 
Sbjct: 121 LRESELAKSFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMDTLPQKLDLLLSDAAARFQGF 180

Query: 241 KYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYP 300
           KYTP++LREEVE YKR+A+RLEP+ITDTVHF+N+SI+QK+K+LVEGGQATMLDIDFGTYP
Sbjct: 181 KYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLDIDFGTYP 240

Query: 301 FVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQE 360
           FVTSSSPSAGGICTGLGIAP VVGDLIGVVKAYTTRVGSGPFPTE  G GGD LRLAGQE
Sbjct: 241 FVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQE 300

Query: 361 FGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVK 420
           FGTTTGRPRRCGWLD+VALK+ CQING +SLNLTKLDVLS+L EIQLGVAYK+ DGTPVK
Sbjct: 301 FGTTTGRPRRCGWLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTPVK 360

Query: 421 SFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVG 480
           SFP DL LLE+L VEYEVLPGW+SDISSVRNYSDLPK A+++VERIEELVGVPI+YIG+G
Sbjct: 361 SFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGVPIHYIGIG 420

Query: 481 PGRDALIYK 489
           PGRDALIYK
Sbjct: 421 PGRDALIYK 429
>d1qf5a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Escherichia coli [TaxId: 562]} Length = 431 Back     information, alignment and structure
>d1p9ba_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 424 Back     information, alignment and structure
>d1iwea_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse (Mus musculus) [TaxId: 10090]} Length = 430 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query489
d1dj2a_429 Adenylosuccinate synthetase, PurA {Mouse-ear cress 100.0
d1qf5a_431 Adenylosuccinate synthetase, PurA {Escherichia col 100.0
d1p9ba_424 Adenylosuccinate synthetase, PurA {Malaria parasit 100.0
d1iwea_430 Adenylosuccinate synthetase, PurA {Mouse (Mus musc 100.0
d1a0ia1109 ATP-dependent DNA ligase {Bacteriophage T7 [TaxId: 85.44
>d1dj2a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Adenylosuccinate synthetase, PurA
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2e-161  Score=1260.41  Aligned_cols=429  Identities=88%  Similarity=1.405  Sum_probs=420.4

Q ss_pred             cccCCceEEEEcCCCccCCchhhHhhhccCCCEEEecCCCCCCccEEEecCCeEEEEeecCceeecCCceeEecCCeEec
Q 011288           61 IESLSQVSGVLGSQWGDEGKGKLVDILAEHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVH  140 (489)
Q Consensus        61 ~~~~~~~~vVvG~qwGDEGKGKivD~La~~~d~VVRfnGG~NAGHTVv~~~g~k~~lhliPSGil~~~~~~vIG~GvVvd  140 (489)
                      |++|+++.+|||+|||||||||||||||+++|+|||||||+||||||++.+|+||+|||||||+|+|+++|+||+|||||
T Consensus         1 ~~~~~~v~~VvG~qwGDEGKGkivD~La~~~d~VvR~~GG~NAGHTVv~~~G~~~~lhllPSGil~~~~~~vIg~GvVid   80 (429)
T d1dj2a_           1 IGSLSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTTCVIGNGVVVH   80 (429)
T ss_dssp             CTTSCSEEEEEESSSSCSSHHHHHHHHGGGCSEEEECSCCTTCCEEEECSSCCEEEESSSCGGGGSTTCEEEECTTCEEC
T ss_pred             CCcccceEEEEeCCcccCCccHHHHHHhccCCEEEEccCCCCCCcEEEecCCeEEEEeccCcEEecCCCeEEECCcEEEc
Confidence            57899999999999999999999999999999999999999999999967899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHCCCCCCCCeEEeCCccccchhHHHhHHHHHHHhcCCCCCCCCCcchhhhccccccCCCeEeeCCCCC
Q 011288          141 LPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMD  220 (489)
Q Consensus       141 p~~L~~Ei~~L~~~Gi~~~~rL~IS~rAhiv~p~H~~~D~~~E~~rg~~~iGTTgrGIGpay~dk~~R~giRv~DL~~~~  220 (489)
                      |+.|++||+.|+++|+++.+||+||+||||++|||+++|+++|.+++.++||||||||||||+||++|.|||++||+|++
T Consensus        81 p~~L~~Ei~~L~~~g~~~~~~l~is~~ahli~p~H~~~d~~~E~~~~~~~iGTTgrGIGPaY~dK~~R~giR~~DL~~~~  160 (429)
T d1dj2a_          81 LPGLFKEIDGLESNGVSCKGRILVSDRAHLLFDFHQEVDGLRESELAKSFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMD  160 (429)
T ss_dssp             HHHHHHHHHHHHTTTCCCTTTEEEESSSEECCHHHHHHHHHHHHHSCSCCCCCCSCCHHHHHHHHHHTCCCBGGGGGCTT
T ss_pred             HHHHHHHHHHHHhhcccccccccccccccccCchHHHHHHHHHhhhhhhccccccCcccHHHHhhcccCCcccccchhHH
Confidence            99999999999999999878999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhhccCCCCCcccHHHHHHHHHHHHHHhCCCccChHHHHHHHHHCCCcEEEEeccchhhcccCCCCC
Q 011288          221 TFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYP  300 (489)
Q Consensus       221 ~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~D~~~~l~~al~~gk~vLfEGAQG~LLDid~GtYP  300 (489)
                      .|++||+.++++++.+++.+...+...++++++|.+++++|+||++|+..++++++++||+||||||||+|||+||||||
T Consensus       161 ~l~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d~~~~l~~al~~gk~ILfEGAQG~lLDid~GtYP  240 (429)
T d1dj2a_         161 TLPQKLDLLLSDAAARFQGFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLDIDFGTYP  240 (429)
T ss_dssp             THHHHHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHTTTEECHHHHHHHHHHTTCCEEEEEEEEGGGCTTTSSTT
T ss_pred             HHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhhhhhccHHHHHHHHHcCCcEEEEcccceeeeeccCccc
Confidence            99999999999999999888777777888999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCcccccccccCCCCcccCeEEEEEeecccccccCCCCCccCCCccchhhhccCCCCCCCCCCCccccchHHHHH
Q 011288          301 FVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALK  380 (489)
Q Consensus       301 ~VTSSntta~g~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPfPTEl~~~~g~~lr~~g~E~GttTGRpRR~GwlDlv~lr  380 (489)
                      |||||||+++++|+|+|++|+.|++||||+|||+||||+||||||++++.++.||+.|+|||+||||||||||||+|++|
T Consensus       241 ~VTSSntt~~~~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPfpTEl~~e~g~~lr~~g~E~GttTGRpRR~GW~D~v~lr  320 (429)
T d1dj2a_         241 FVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQEFGTTTGRPRRCGWLDIVALK  320 (429)
T ss_dssp             SSCSSCCSTHHHHHTTTCCTTTCCCEEEEEESEEEESSSSCCTTBCCSHHHHHHHHHHTCBCTTTCCBCEEEEEEHHHHH
T ss_pred             ccccCCchHhhhhhhcCCCCcceeeEEEEeeccceeecCCcccccccchhhHHHhhcccccccccCCCCccchhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCcceEeeecccccCCCCCcEEEeeeecCCCcccccCCcChhhhccCeEEEEEcCCcccccccccCCCCCcHHHH
Q 011288          381 YCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAR  460 (489)
Q Consensus       381 ya~~ing~~~lalTkLDvL~~~~~IkIcv~Y~~~~G~~~~~~P~~~~~l~~~~pvY~~~~GW~~di~~~~~~~~LP~~a~  460 (489)
                      ||+++||+|+|+||||||||+|++||||++|+..||+.+++||.+++.+++|+|||++||||++|++++++|++||++||
T Consensus       321 ya~~~ng~~~l~ltklDvL~~~~~ikvc~~Y~~~~g~~~~~~p~~~~~~~~~~pvy~~~~GW~~~~~~~~~~~~LP~~a~  400 (429)
T d1dj2a_         321 FSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQ  400 (429)
T ss_dssp             HHHHHHTCSEEEEECGGGGGGCSEEEEEEEEECSSSCBCCSCCSCHHHHHHCEEEEEEEECCCSCCTTCCSSTTSCHHHH
T ss_pred             hhheeccCceEEEEeeccccCCceeEEEEEeEcCCCCCcccCCCChHHhccCeEEEEEcCCCCCccccCCChHHcCHHHH
Confidence            99999999999999999999999999999999659999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEeeCCCccccccC
Q 011288          461 EFVERIEELVGVPINYIGVGPGRDALIYK  489 (489)
Q Consensus       461 ~yi~~IE~~~gvpi~~isvGP~R~~~i~~  489 (489)
                      +||++||+++|+||.|||+||+|+|||+|
T Consensus       401 ~yi~~iE~~~gvpi~~is~GP~R~~tI~r  429 (429)
T d1dj2a_         401 QYVERIEELVGVPIHYIGIGPGRDALIYK  429 (429)
T ss_dssp             HHHHHHHHHHCSCEEEEECSSSSSCEEEC
T ss_pred             HHHHHHHHHHCCCEEEEEeCCCcccEeeC
Confidence            99999999999999999999999999987
>d1qf5a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p9ba_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1iwea_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1a0ia1 b.40.4.6 (A:241-349) ATP-dependent DNA ligase {Bacteriophage T7 [TaxId: 10760]} Back     information, alignment and structure