Citrus Sinensis ID: 011290

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
MDQIVQDTLSDRVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRAVVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSPV
ccccccccEEcEEEEccEEEEEEEccccEEEEccccccccccccEEEEEEEEEEEEEEEEEEEccccEEEccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHcHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHccccccEEEEEcccccHHHHHHHHHcccccHHHHcccccccccEEEEcccccccHHHccccccccccHHHHHHHHHccccccccEEEEEcccEEEEEEEEEEccEEEEEccccccccccccHHHHHHHHHHHHHccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEccEEEEEEEEcccccccccccccccccccEEEEEEEccccHHHHHHHHHHcccccccccccEEEEEEEEEEEEEccccccccccccEEEccccccccccEEEEccccccccccEEEEEEcccEEEcccc
cccccccccccEEEEcccEEEEEEccccEEEEccccccEEEEcHHEEEEEEEccEEEEEEEEEcccccEEccccccccccEEEEccccHHHHHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHHHHcccccccEEEEEccccHHHHHHHHHcccccHHHHHcccccEEEEEEccccccHHHHHHHHccccccccHHHHHHHHHHccccccEEEEEEccccEEEEEEEHHcEEEEEcccccHHHccccccHEEHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEcccEEEEEEEcccccccccccccccccccccEEEEEEccccHHHHHHHHHHHcccccccccEEEEEEEEEEEEEccccccccccccEEEEcccEEEcccccEcccccEccccccEEEEEccccEEEEccc
MDQIVQDTLSDRVRVSGRITAMtltgdgrlrwtdghqrsLTLEKQVLGFVVEGSKIRIRAVvdgrdeiccggragsvvrkdfvfeplsedskRLWCEKLRDFIDsfgrpkrlyifvnpfggkkiaskiflddvkplledanIQFTVQETTQQLHAKEIVKVLDlskydgivcvsGDGILVEVVNGlleredwndaikvplgvvpadfldagtgngMIKSLLDLvgepckasNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYngrvsfvpapgfenhgepstyseqnicnpipsqqqpikilqhgyqgpdvdlknlewriINGPFVAVWLhnvpwgsentmaapdakfsdgyldliiikdcPKLALFSLLSNlnkgghvespYVAYLKVKAFilepgaltqepnregiidcdgevlargkgtyqcdqkslmsyDKLQITVDQGlatlfspv
mdqivqdtlsdrvrvsgritamtltgdgrlrwtdghqrsltlekqvlgfvvegskiriravvdgrdeiccggragsvvrkdfvfeplsedskrlwCEKLRDFIDSFGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPgaltqepnreGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSPV
MDQIVQDTLSDRVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRAVVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSPV
************VRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRAVVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGF***********************PIKILQHGYQGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATL****
***********RVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRAVVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFID*FGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPS**************PDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPGA*****NREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSPV
MDQIVQDTLSDRVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRAVVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSPV
******DTLSDRVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRAVVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPG*******************************GYQGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSPV
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MDQIVQDTLSDRVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRAVVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSPV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query489 2.2.26 [Sep-21-2011]
Q9NYA1384 Sphingosine kinase 1 OS=H yes no 0.642 0.817 0.330 7e-41
Q8CI15382 Sphingosine kinase 1 OS=M yes no 0.656 0.840 0.315 9e-38
Q91V26383 Sphingosine kinase 1 OS=R yes no 0.658 0.840 0.319 1e-37
Q9JIA7617 Sphingosine kinase 2 OS=M no no 0.402 0.319 0.403 7e-37
Q8TCT0537 Ceramide kinase OS=Homo s no no 0.779 0.709 0.281 2e-35
Q86KF9624 Sphingosine kinase A OS=D yes no 0.390 0.306 0.425 2e-35
Q9NRA0654 Sphingosine kinase 2 OS=H no no 0.386 0.288 0.405 8e-35
Q8K4Q7531 Ceramide kinase OS=Mus mu no no 0.801 0.738 0.278 6e-33
O14159458 Sphingoid long chain base yes no 0.660 0.705 0.277 2e-28
Q12246624 Sphingoid long chain base yes no 0.685 0.536 0.260 1e-25
>sp|Q9NYA1|SPHK1_HUMAN Sphingosine kinase 1 OS=Homo sapiens GN=SPHK1 PE=1 SV=1 Back     alignment and function desciption
 Score =  168 bits (426), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 182/366 (49%), Gaps = 52/366 (14%)

Query: 108 RPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKY 167
           RP R+ + +NP GGK  A ++F   V+PLL +A I FT+  T ++ HA+E+V+  +L ++
Sbjct: 13  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRW 72

Query: 168 DGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVG-- 225
           D +V +SGDG++ EVVNGL+ER DW  AI+ PL  +P     AG+GN +  SL    G  
Sbjct: 73  DALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLP-----AGSGNALAASLNHYAGYE 127

Query: 226 ------EPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYR 279
                      +  +   +     LL + T      R  SVL LAWG +AD+D+ESEKYR
Sbjct: 128 QVTNEDLLTNCTLLLCRRLLSPMNLLSLHT--ASGLRLFSVLSLAWGFIADVDLESEKYR 185

Query: 280 WMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKI 339
            +G  R       R+  LR Y GR++++P               +   +P+  QQ P+  
Sbjct: 186 RLGEMRFTLGTFLRLAALRTYRGRLAYLPV---------GRVGSKTPASPVVVQQGPV-- 234

Query: 340 LQHGYQGPDVDLKNLE------WRII-NGPFVAVW-LHNVPWGSENTMAAPDAKFSDGYL 391
                   D  L  LE      W ++ +  FV V  L +   GSE   AAP  + + G +
Sbjct: 235 --------DAHLVPLEEPVPSHWTVVPDEDFVLVLALLHSHLGSE-MFAAPMGRCAAGVM 285

Query: 392 DLIIIK-DCPKLALFSLLSNLNKGGHV--ESPYVAYLKVKAFILEPGALTQEPNREGIID 448
            L  ++    +  L  L   + KG H+  E PY+ Y+ V AF LEP       + +G+  
Sbjct: 286 HLFYVRAGVSRAMLLRLFLAMEKGRHMEYECPYLVYVPVVAFRLEPK------DGKGVFA 339

Query: 449 CDGEVL 454
            DGE++
Sbjct: 340 VDGELM 345
Catalyzes the phosphorylation of sphingosine to form sphingosine 1-phosphate (SPP), a lipid mediator with both intra-and extracellular functions. Also acts on D-erythro-sphingosine and to a lesser extent sphinganine, but not other lipids, such as D,L-threo-dihydrosphingosine, N,N-dimethylsphingosine, diacylglycerol, ceramide, or phosphatidylinositol.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 9EC: 1
>sp|Q8CI15|SPHK1_MOUSE Sphingosine kinase 1 OS=Mus musculus GN=Sphk1 PE=1 SV=1 Back     alignment and function description
>sp|Q91V26|SPHK1_RAT Sphingosine kinase 1 OS=Rattus norvegicus GN=Sphk1 PE=2 SV=1 Back     alignment and function description
>sp|Q9JIA7|SPHK2_MOUSE Sphingosine kinase 2 OS=Mus musculus GN=Sphk2 PE=1 SV=2 Back     alignment and function description
>sp|Q8TCT0|CERK1_HUMAN Ceramide kinase OS=Homo sapiens GN=CERK PE=1 SV=1 Back     alignment and function description
>sp|Q86KF9|SPHKA_DICDI Sphingosine kinase A OS=Dictyostelium discoideum GN=sgkA PE=2 SV=2 Back     alignment and function description
>sp|Q9NRA0|SPHK2_HUMAN Sphingosine kinase 2 OS=Homo sapiens GN=SPHK2 PE=1 SV=2 Back     alignment and function description
>sp|Q8K4Q7|CERK1_MOUSE Ceramide kinase OS=Mus musculus GN=Cerk PE=2 SV=2 Back     alignment and function description
>sp|O14159|LCB4_SCHPO Sphingoid long chain base kinase 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lcb4 PE=3 SV=1 Back     alignment and function description
>sp|Q12246|LCB4_YEAST Sphingoid long chain base kinase 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query489
255567389479 Sphingosine kinase, putative [Ricinus co 0.979 1.0 0.701 0.0
359495505489 PREDICTED: sphingosine kinase B-like [Vi 0.989 0.989 0.686 0.0
302144199506 unnamed protein product [Vitis vinifera] 0.989 0.956 0.686 0.0
224116224494 predicted protein [Populus trichocarpa] 0.969 0.959 0.701 0.0
356555028488 PREDICTED: sphingosine kinase A-like [Gl 0.989 0.991 0.663 0.0
356524740486 PREDICTED: sphingosine kinase A-like [Gl 0.973 0.979 0.659 0.0
334186773485 sphingosine kinase 1 [Arabidopsis thalia 0.955 0.962 0.65 0.0
334186771481 Diacylglycerol kinase family protein [Ar 0.955 0.970 0.642 0.0
147797198487 hypothetical protein VITISV_004834 [Viti 0.983 0.987 0.636 0.0
297804000 1273 D-erythro-sphingosine kinase [Arabidopsi 0.955 0.366 0.65 1e-179
>gi|255567389|ref|XP_002524674.1| Sphingosine kinase, putative [Ricinus communis] gi|223536035|gb|EEF37693.1| Sphingosine kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/489 (70%), Positives = 408/489 (83%), Gaps = 10/489 (2%)

Query: 1   MDQIVQDTLSDRVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRA 60
           MD   Q  +SD+V V+G  T +TLT  G LRWTD  QR LT+EK+VLGFV+EGSKIR++ 
Sbjct: 1   MDSSPQPIISDQVIVNGATTLLTLTAGGILRWTDRGQRCLTVEKEVLGFVIEGSKIRVKT 60

Query: 61  VVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFG 120
           ++D  D ICC G +G++VRKDFVF+PL+EDS+R+ C +LRD++DS GRPKRL +FVNPFG
Sbjct: 61  IIDNGDGICCAGNSGALVRKDFVFQPLTEDSQRVLCNRLRDYLDSLGRPKRLLVFVNPFG 120

Query: 121 GKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILV 180
           GK+ ASKIF D VKPLLEDA++Q T+QET  QLHAKE+   LD+SKYDGIVCVSGDGILV
Sbjct: 121 GKRSASKIFFDTVKPLLEDADVQITLQETKHQLHAKEVTSTLDISKYDGIVCVSGDGILV 180

Query: 181 EVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRG 240
           EVVNGLL REDW DAIK+PLG+VP     AGT NGM KSLLD VGEPCKASNA+LA+IRG
Sbjct: 181 EVVNGLLAREDWRDAIKLPLGMVP-----AGTSNGMAKSLLDSVGEPCKASNAVLAIIRG 235

Query: 241 HKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQY 300
           HK  LDVATILQG+T+F SVLML+WGLVADIDIESEKYRWMGSARIDFYA+QRI +LR Y
Sbjct: 236 HKCSLDVATILQGETKFFSVLMLSWGLVADIDIESEKYRWMGSARIDFYAVQRIFHLRHY 295

Query: 301 NGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGPDVDLKNLEWRIIN 360
           NG +SFVPAPGFE +G P++Y+ ++       Q+QP+K  QHGYQGPDV+L NL+WR+I+
Sbjct: 296 NGCISFVPAPGFETYGVPTSYNAESTSK----QEQPLKT-QHGYQGPDVNLVNLDWRMIS 350

Query: 361 GPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESP 420
           GPFV++WLHNVPWG E+ MAAPDAKFSDGYLDLI+I+ CPKL+L +L++ LN G HV+SP
Sbjct: 351 GPFVSIWLHNVPWGGEDVMAAPDAKFSDGYLDLILIQQCPKLSLLALMTALNNGDHVKSP 410

Query: 421 YVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQ 480
           YV YLKVKAFILEPG  T +P + GIID DGEVLARG G+Y+CDQKSLM YDKL + VDQ
Sbjct: 411 YVIYLKVKAFILEPGPRTDDPTKGGIIDVDGEVLARGNGSYKCDQKSLMVYDKLHMMVDQ 470

Query: 481 GLATLFSPV 489
           GLATLFSPV
Sbjct: 471 GLATLFSPV 479

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359495505|ref|XP_002270943.2| PREDICTED: sphingosine kinase B-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302144199|emb|CBI23326.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224116224|ref|XP_002317243.1| predicted protein [Populus trichocarpa] gi|222860308|gb|EEE97855.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356555028|ref|XP_003545841.1| PREDICTED: sphingosine kinase A-like [Glycine max] Back     alignment and taxonomy information
>gi|356524740|ref|XP_003530986.1| PREDICTED: sphingosine kinase A-like [Glycine max] Back     alignment and taxonomy information
>gi|334186773|ref|NP_193885.6| sphingosine kinase 1 [Arabidopsis thaliana] gi|22136030|gb|AAM91597.1| putative protein [Arabidopsis thaliana] gi|30387599|gb|AAP31965.1| At4g21540 [Arabidopsis thaliana] gi|332659065|gb|AEE84465.1| sphingosine kinase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|334186771|ref|NP_001190787.1| Diacylglycerol kinase family protein [Arabidopsis thaliana] gi|325656782|gb|ADZ38930.1| sphingosine kinase 2 [Arabidopsis thaliana] gi|332659064|gb|AEE84464.1| Diacylglycerol kinase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|147797198|emb|CAN60368.1| hypothetical protein VITISV_004834 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297804000|ref|XP_002869884.1| D-erythro-sphingosine kinase [Arabidopsis lyrata subsp. lyrata] gi|297315720|gb|EFH46143.1| D-erythro-sphingosine kinase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query489
DICTYBASE|DDB_G0272522624 sgkA "sphingosine kinase" [Dic 0.402 0.315 0.419 1.1e-50
UNIPROTKB|I3LK44653 SPHK2 "Uncharacterized protein 0.456 0.341 0.391 1.2e-48
UNIPROTKB|I3L807655 LOC100738292 "Uncharacterized 0.456 0.340 0.391 1.3e-48
MGI|MGI:1861380617 Sphk2 "sphingosine kinase 2" [ 0.445 0.353 0.388 1.5e-48
UNIPROTKB|J9P106674 SPHK2 "Uncharacterized protein 0.458 0.332 0.394 3.7e-47
UNIPROTKB|E2RR84 765 SPHK2 "Uncharacterized protein 0.458 0.292 0.394 1.3e-46
RGD|1307757616 Sphk2 "sphingosine kinase 2" [ 0.447 0.355 0.385 3.8e-46
UNIPROTKB|B4DU87595 SPHK2 "Sphingosine kinase 2" [ 0.456 0.374 0.387 7.8e-46
UNIPROTKB|Q9NRA0654 SPHK2 "Sphingosine kinase 2" [ 0.456 0.340 0.387 3.3e-45
UNIPROTKB|A0T4C8 761 SPHK2 "Sphingosine kinase-2 va 0.456 0.293 0.387 1.2e-44
DICTYBASE|DDB_G0272522 sgkA "sphingosine kinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
 Score = 378 (138.1 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
 Identities = 89/212 (41%), Positives = 128/212 (60%)

Query:   102 FIDSF--GRPK--RLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKE 157
             F+D+   G P+  R+ + +NP  GKK++  IF  D+  L +D+ I      T    HAK+
Sbjct:   169 FLDTLPMGNPRERRIRVILNPKSGKKMSDSIF-KDINELFKDSKIFVKKTVTKGPDHAKK 227

Query:   158 IVKVLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMI 217
             I    +L KYD IV +SGDG+  E +NGLL R D+  A K+PL ++P      GTGNG+ 
Sbjct:   228 IGYKFNLKKYDTIVFISGDGLFHEFINGLLSRTDFEQARKIPLALIPG-----GTGNGIA 282

Query:   218 KSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEK 277
              S+   + +P   +   LAVIRG  + LDV+ I QG  ++ S+L L WG+V+D+DIESEK
Sbjct:   283 CSIG--LQDPMSCA---LAVIRGFTKPLDVSVIQQGDKKWCSILSLTWGIVSDVDIESEK 337

Query:   278 YRWMGSARIDFYALQRILYLRQYNGRVSFVPA 309
             YR +G  R+   A  RIL LR Y G++ ++PA
Sbjct:   338 YRALGDVRLILGAALRILNLRIYRGKIWYLPA 369
GO:0031143 "pseudopodium" evidence=IDA
GO:0017050 "D-erythro-sphingosine kinase activity" evidence=IGI;IDA
GO:0008284 "positive regulation of cell proliferation" evidence=IGI;IMP
GO:0006648 "dihydrosphingosine-1-P pathway" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0005634 "nucleus" evidence=IEA;IDA
GO:0005524 "ATP binding" evidence=IEA;IDA
GO:0007205 "protein kinase C-activating G-protein coupled receptor signaling pathway" evidence=IEA
GO:0008481 "sphinganine kinase activity" evidence=IEA
GO:0004143 "diacylglycerol kinase activity" evidence=ISS
GO:0016740 "transferase activity" evidence=IEA
GO:0016310 "phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=IEA
GO:0006665 "sphingolipid metabolic process" evidence=IEA
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
UNIPROTKB|I3LK44 SPHK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3L807 LOC100738292 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1861380 Sphk2 "sphingosine kinase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|J9P106 SPHK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR84 SPHK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1307757 Sphk2 "sphingosine kinase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B4DU87 SPHK2 "Sphingosine kinase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NRA0 SPHK2 "Sphingosine kinase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A0T4C8 SPHK2 "Sphingosine kinase-2 variant" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.91LOW CONFIDENCE prediction!
3rd Layer2.7.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query489
PLN02958481 PLN02958, PLN02958, diacylglycerol kinase/D-erythr 0.0
COG1597301 COG1597, LCB5, Sphingosine kinase and enzymes rela 1e-31
pfam00781127 pfam00781, DAGK_cat, Diacylglycerol kinase catalyt 1e-27
PLN02204601 PLN02204, PLN02204, diacylglycerol kinase 2e-24
smart00046124 smart00046, DAGKc, Diacylglycerol kinase catalytic 1e-11
TIGR00147293 TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/Bm 1e-10
PRK13337304 PRK13337, PRK13337, putative lipid kinase; Reviewe 1e-07
PRK13055334 PRK13055, PRK13055, putative lipid kinase; Reviewe 4e-06
PRK13059295 PRK13059, PRK13059, putative lipid kinase; Reviewe 1e-05
PRK13055334 PRK13055, PRK13055, putative lipid kinase; Reviewe 3e-05
PRK13059295 PRK13059, PRK13059, putative lipid kinase; Reviewe 2e-04
PRK13337304 PRK13337, PRK13337, putative lipid kinase; Reviewe 0.001
PRK12361547 PRK12361, PRK12361, hypothetical protein; Provisio 0.003
>gnl|CDD|215517 PLN02958, PLN02958, diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information 
 Score =  854 bits (2208), Expect = 0.0
 Identities = 350/489 (71%), Positives = 415/489 (84%), Gaps = 10/489 (2%)

Query: 1   MDQIVQDTLSDRVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRA 60
            +      +SDRV V+G +T +TLT +G+LRWTD  QR LT+EK+VLGFV+EGSKIR++ 
Sbjct: 3   DELPSPAIISDRVLVNGVLTPLTLTAEGKLRWTDSGQRCLTVEKEVLGFVIEGSKIRVKT 62

Query: 61  VVDGRDEICCGGRAGSVVRKDFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFG 120
           +V+    ICC G AG++ RKDFVFEPLS++S+RLWC+KLRD++DS GRPKRL +FVNPFG
Sbjct: 63  IVEKGGGICCRGSAGALARKDFVFEPLSDESRRLWCQKLRDYLDSLGRPKRLLVFVNPFG 122

Query: 121 GKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILV 180
           GKK ASKIF D VKPLLEDA+IQ T+QET  QLHAKE+V+ +DLSKYDGIVCVSGDGILV
Sbjct: 123 GKKSASKIFFDVVKPLLEDADIQLTIQETKYQLHAKEVVRTMDLSKYDGIVCVSGDGILV 182

Query: 181 EVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRG 240
           EVVNGLLEREDW  AIK+P+G+VP     AGTGNGM KSLLD VGEPC A+NA+LA+IRG
Sbjct: 183 EVVNGLLEREDWKTAIKLPIGMVP-----AGTGNGMAKSLLDSVGEPCSATNAVLAIIRG 237

Query: 241 HKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQY 300
           HK  LDVATILQG+T+F SVLMLAWGLVADIDIESEKYRWMGSAR+DFY LQRIL LRQY
Sbjct: 238 HKCSLDVATILQGETKFFSVLMLAWGLVADIDIESEKYRWMGSARLDFYGLQRILCLRQY 297

Query: 301 NGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGPDVDLKNLEWRIIN 360
           NGR+SFVPAPGFE +GEP++Y+ ++      S+++  K  QHGYQGPDV L+NL+WR I 
Sbjct: 298 NGRISFVPAPGFEAYGEPTSYNGES-----TSKEESGKDKQHGYQGPDVKLENLDWRTIK 352

Query: 361 GPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESP 420
           GPFV+VWLHNVPWG E+T+AAPDAKFSDGYLDLI+IKDCPKLAL +L++ L+ G HV+SP
Sbjct: 353 GPFVSVWLHNVPWGGEDTLAAPDAKFSDGYLDLILIKDCPKLALLALMTKLSDGTHVKSP 412

Query: 421 YVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQ 480
           YV YLKVKAF+LEPG  T +P + GIID DGEVLARG G+Y+CDQK+LMSYDKLQI+VDQ
Sbjct: 413 YVMYLKVKAFVLEPGPRTDDPTKGGIIDSDGEVLARGNGSYKCDQKALMSYDKLQISVDQ 472

Query: 481 GLATLFSPV 489
           GLATLFSPV
Sbjct: 473 GLATLFSPV 481

Length = 481
>gnl|CDD|224513 COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|216116 pfam00781, DAGK_cat, Diacylglycerol kinase catalytic domain Back     alignment and domain information
>gnl|CDD|215126 PLN02204, PLN02204, diacylglycerol kinase Back     alignment and domain information
>gnl|CDD|214487 smart00046, DAGKc, Diacylglycerol kinase catalytic domain (presumed) Back     alignment and domain information
>gnl|CDD|161732 TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/BmrU family Back     alignment and domain information
>gnl|CDD|183982 PRK13337, PRK13337, putative lipid kinase; Reviewed Back     alignment and domain information
>gnl|CDD|237282 PRK13055, PRK13055, putative lipid kinase; Reviewed Back     alignment and domain information
>gnl|CDD|183858 PRK13059, PRK13059, putative lipid kinase; Reviewed Back     alignment and domain information
>gnl|CDD|237282 PRK13055, PRK13055, putative lipid kinase; Reviewed Back     alignment and domain information
>gnl|CDD|183858 PRK13059, PRK13059, putative lipid kinase; Reviewed Back     alignment and domain information
>gnl|CDD|183982 PRK13337, PRK13337, putative lipid kinase; Reviewed Back     alignment and domain information
>gnl|CDD|183473 PRK12361, PRK12361, hypothetical protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 489
PLN02958481 diacylglycerol kinase/D-erythro-sphingosine kinase 100.0
KOG1116579 consensus Sphingosine kinase, involved in sphingol 100.0
PLN02204601 diacylglycerol kinase 100.0
KOG1115516 consensus Ceramide kinase [Lipid transport and met 100.0
PRK11914306 diacylglycerol kinase; Reviewed 100.0
PRK13337304 putative lipid kinase; Reviewed 100.0
PRK13059295 putative lipid kinase; Reviewed 100.0
PRK13055334 putative lipid kinase; Reviewed 100.0
PRK13057287 putative lipid kinase; Reviewed 100.0
PRK00861300 putative lipid kinase; Reviewed 100.0
COG1597301 LCB5 Sphingosine kinase and enzymes related to euk 100.0
PRK13054300 lipid kinase; Reviewed 100.0
TIGR03702293 lip_kinase_YegS lipid kinase YegS. Members of this 100.0
TIGR00147293 lipid kinase, YegS/Rv2252/BmrU family. The E. coli 100.0
PRK12361547 hypothetical protein; Provisional 100.0
PF00781130 DAGK_cat: Diacylglycerol kinase catalytic domain; 99.92
KOG4435535 consensus Predicted lipid kinase [Lipid transport 99.9
KOG1169634 consensus Diacylglycerol kinase [Lipid transport a 99.89
smart00046124 DAGKc Diacylglycerol kinase catalytic domain (pres 99.82
KOG0782 1004 consensus Predicted diacylglycerol kinase [Signal 99.79
smart00045160 DAGKa Diacylglycerol kinase accessory domain (pres 99.37
PRK03708277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 98.89
PRK02645305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 98.71
PF00609161 DAGK_acc: Diacylglycerol kinase accessory domain; 98.6
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 98.24
PRK01231295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 98.14
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.97
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 97.95
KOG1170 1099 consensus Diacylglycerol kinase [Lipid transport a 97.64
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.63
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 97.62
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 97.58
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.35
KOG1170 1099 consensus Diacylglycerol kinase [Lipid transport a 97.32
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 97.29
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.26
PRK14076569 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 97.21
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.07
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 96.98
PRK03501264 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.95
PLN02727986 NAD kinase 96.88
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.85
PLN02929301 NADH kinase 96.22
PF11711382 Tim54: Inner membrane protein import complex subun 96.05
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.04
PF13685250 Fe-ADH_2: Iron-containing alcohol dehydrogenase; P 95.71
PRK01185271 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 95.7
cd08549332 G1PDH_related Glycerol-1-phosphate_dehydrogenase a 95.33
cd08181357 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 94.85
cd08550349 GlyDH-like Glycerol_dehydrogenase-like. Families o 94.85
cd08194375 Fe-ADH6 Iron-containing alcohol dehydrogenases-lik 94.79
cd08191386 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyz 94.73
cd08186383 Fe-ADH8 Iron-containing alcohol dehydrogenase. Typ 94.66
PRK09423366 gldA glycerol dehydrogenase; Provisional 94.42
cd08171345 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol 94.32
KOG4180395 consensus Predicted kinase [General function predi 94.28
cd08183374 Fe-ADH2 Iron-containing alcohol dehydrogenases-lik 94.27
PRK02231272 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 94.25
cd08176377 LPO Lactadehyde:propanediol oxidoreductase (LPO) c 94.17
PRK00843350 egsA NAD(P)-dependent glycerol-1-phosphate dehydro 94.15
cd08170351 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes ox 94.05
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 94.02
PRK10624382 L-1,2-propanediol oxidoreductase; Provisional 93.94
cd08190414 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) inv 93.9
cd08172347 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol 93.81
cd08173339 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro 93.68
cd08187382 BDH Butanol dehydrogenase catalyzes the conversion 93.62
cd08195345 DHQS Dehydroquinate synthase (DHQS) catalyzes the 93.41
TIGR02638379 lactal_redase lactaldehyde reductase. This clade o 93.37
cd08192370 Fe-ADH7 Iron-containing alcohol dehydrogenases-lik 92.92
cd08182367 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) c 92.83
cd08551370 Fe-ADH iron-containing alcohol dehydrogenases (Fe- 92.81
cd08175348 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) c 92.76
cd08188377 Fe-ADH4 Iron-containing alcohol dehydrogenases-lik 92.6
cd08193376 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyze 92.56
PRK10586362 putative oxidoreductase; Provisional 92.54
cd07766332 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) 92.41
cd08174331 G1PDH-like Glycerol-1-phosphate dehydrogenase-like 92.38
cd08199354 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi- 92.23
COG1454377 EutG Alcohol dehydrogenase, class IV [Energy produ 92.16
PRK09860383 putative alcohol dehydrogenase; Provisional 92.08
PRK00002358 aroB 3-dehydroquinate synthase; Reviewed 91.94
cd08197355 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) cataly 91.9
COG0061281 nadF NAD kinase [Coenzyme metabolism] 91.66
cd08178398 AAD_C C-terminal alcohol dehydrogenase domain of t 91.33
TIGR01357344 aroB 3-dehydroquinate synthase. This model represe 91.32
KOG2178409 consensus Predicted sugar kinase [Carbohydrate tra 91.14
cd08169344 DHQ-like Dehydroquinate synthase-like which includ 91.06
cd08185380 Fe-ADH1 Iron-containing alcohol dehydrogenases-lik 90.63
cd08184347 Fe-ADH3 Iron-containing alcohol dehydrogenases-lik 90.41
PRK15454395 ethanol dehydrogenase EutG; Provisional 89.14
PF00465366 Fe-ADH: Iron-containing alcohol dehydrogenase ; In 88.94
cd08179375 NADPH_BDH NADPH-dependent butanol dehydrogenase in 88.63
cd08189374 Fe-ADH5 Iron-containing alcohol dehydrogenases-lik 88.38
cd08180332 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes 88.0
COG0371360 GldA Glycerol dehydrogenase and related enzymes [E 85.73
cd08198369 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DH 85.16
PLN02834433 3-dehydroquinate synthase 85.04
PRK06203389 aroB 3-dehydroquinate synthase; Reviewed 84.21
cd08177337 MAR Maleylacetate reductase is involved in many ar 80.77
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information 
Probab=100.00  E-value=6.8e-94  Score=761.84  Aligned_cols=479  Identities=73%  Similarity=1.241  Sum_probs=432.7

Q ss_pred             CCccccceeeeeEEEeceeEEEEEcCCCeEEEecCCceeeeeeeeeeEEEEcCceEEEEEeecCCCcccccCCCCceeEe
Q 011290            1 MDQIVQDTLSDRVRVSGRITAMTLTGDGRLRWTDGHQRSLTLEKQVLGFVVEGSKIRIRAVVDGRDEICCGGRAGSVVRK   80 (489)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~~~~~~~vl~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (489)
                      |+..++.+++++|+|||..+++||+++|+|+|+++.++++++++||||+.++|++++|+++++...+.+|++++++|+|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (481)
T PLN02958          3 DELPSPAIISDRVLVNGVLTPLTLTAEGKLRWTDSGQRCLTVEKEVLGFVIEGSKIRVKTIVEKGGGICCRGSAGALARK   82 (481)
T ss_pred             CcCCCCceeeeeEEECCEEeeEEeccCCEEEeecCCcceEEEeeeeeEEEEeCCEEEEEEEEecCCcccccCCCCCceee
Confidence            45667889999999999999999999999999998899999999999999999999999999998899999999999999


Q ss_pred             eEEecCCCHHHHHHHHHHHHHhhhhcCCCcEEEEEEcCCCCCccccccchHhHHHHHHhCCCcEEEEEeCChhHHHHHHH
Q 011290           81 DFVFEPLSEDSKRLWCEKLRDFIDSFGRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVK  160 (489)
Q Consensus        81 ~~~~~~~~~~~~~~w~~~l~~~~~~~~rpkr~lviiNP~sG~~~a~~~~~~~v~p~l~~a~i~~~v~~T~~~~ha~el~~  160 (489)
                      +++|++.+.+.++.|+++|++++++.+||||++||+||.||++++.++|.++++|+|+.++++++++.|++++||.++++
T Consensus        83 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~v~~T~~~ghA~~la~  162 (481)
T PLN02958         83 DFVFEPLSDESRRLWCQKLRDYLDSLGRPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADIQLTIQETKYQLHAKEVVR  162 (481)
T ss_pred             eEEEeCCCHHHHHHHHHHHHHHHhhccCCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEEEEeccCccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997789999999999999999999999999999


Q ss_pred             HhhcCCCceEEEEcCCChHHHHHHHhhcCcCccccCCCcEEEecCcCCCCcccccceeccccccCCCCcHHHHHHHHHcC
Q 011290          161 VLDLSKYDGIVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRG  240 (489)
Q Consensus       161 ~~~~~~~d~IV~vGGDGtl~EVvnGL~~~~~~~~~~~~plgiIP~~~~~~GSgN~~a~sl~~~~g~~~~~~~A~~~Ii~G  240 (489)
                      ++++.+||.|||+|||||+|||+|||+.+++|+.+.++|||+||+     ||||+||++|++..|+|.++..|+.+|++|
T Consensus       163 ~~~~~~~D~VV~vGGDGTlnEVvNGL~~~~~~~~~~~~pLGiIPa-----GTgNdfArsL~~~~gip~~~~~A~~~I~~g  237 (481)
T PLN02958        163 TMDLSKYDGIVCVSGDGILVEVVNGLLEREDWKTAIKLPIGMVPA-----GTGNGMAKSLLDSVGEPCSATNAVLAIIRG  237 (481)
T ss_pred             HhhhcCCCEEEEEcCCCHHHHHHHHHhhCccccccccCceEEecC-----cCcchhhhhhccccCCCcCHHHHHHHHHcC
Confidence            998889999999999999999999999998888788999999999     999999999977778999999999999999


Q ss_pred             CeeeeeEEEEEeCCeeEEEEEeeeeeeeeccccccccccccCchhhHHHHHHHHHhccccceEEEEecCCCCCCCCCCCc
Q 011290          241 HKRLLDVATILQGKTRFHSVLMLAWGLVADIDIESEKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPST  320 (489)
Q Consensus       241 ~~~~lDl~~v~~~~~~~fs~~~~~~G~~adv~~~se~~R~mG~~ry~~~~l~~l~~~r~y~~~i~~~p~~~~~~~~~~~~  320 (489)
                      +.+++|++++++++.++|++++++|||+||++..+|++||||++||.+++++++++++.|+++|+|+|+++.+.++.|..
T Consensus       238 ~~~~vDlg~v~~~~~~~f~vn~~g~GfdAdV~~~se~kr~lG~lrY~~~~l~~l~~~r~y~~~I~~~~a~~~~~~~~~~~  317 (481)
T PLN02958        238 HKCSLDVATILQGETKFFSVLMLAWGLVADIDIESEKYRWMGSARLDFYGLQRILCLRQYNGRISFVPAPGFEAYGEPTS  317 (481)
T ss_pred             CceEEeEEEEEcCCceEEEEEeeeeehhhhhhcccccccccchHHHHHHHHHHHHhcCCcceEEEEEecccccccccccc
Confidence            99999999998655677777789999999999999999999999999999999999999999999999988877777765


Q ss_pred             ccccCcCCCCCCCCCcccccccccCCCcccCCCCceEEEeecEEEEEEeeccCCCCCCCcCCCCccCCCeEEEEEEecCC
Q 011290          321 YSEQNICNPIPSQQQPIKILQHGYQGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCP  400 (489)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~i~g~f~~v~v~N~~~~g~~~~~aP~A~~~DG~ldlilv~~~s  400 (489)
                      +.....     .++.+...+...++++..+....+|+.+++.|++++++|++|+|+++.++|+|+++||.|||++++++|
T Consensus       318 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~fl~v~v~N~~~~Ggg~~iaP~A~l~DG~LDlviv~~~s  392 (481)
T PLN02958        318 YNGEST-----SKEESGKDKQHGYQGPDVKLENLDWRTIKGPFVSVWLHNVPWGGEDTLAAPDAKFSDGYLDLILIKDCP  392 (481)
T ss_pred             cccccc-----ccccccccccccccCCccccCCccceEeecceeEEeeccCcccCCCcccCCcccCCCCeEEEEEEcCCC
Confidence            432110     000111111223455544455568999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhccCCcccCCcEEEEEEeEEEEEeCCCCCCCCCCceEEecCCccccCCceeEecCCCccccccEEEEEec
Q 011290          401 KLALFSLLSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQ  480 (489)
Q Consensus       401 ~~~ll~~l~~~~~G~~~~~~~V~~~kvk~~~i~~~~~~~~~~~~~~~~vDGE~~~~~~~~~~~~~~~L~~~~p~q~~v~~  480 (489)
                      +++++++|.++..|+|++.|+|+|+++++|+|++....+++.++.++++|||.++..|++|+|.|++|++|+|+|++|||
T Consensus       393 ~~~lL~~l~~~~~G~h~~~~~V~~~k~k~~~I~~~~~~~~~~~~~~i~iDGE~~~~~p~~i~v~~~al~~~~~~~~~~~~  472 (481)
T PLN02958        393 KLALLALMTKLSDGTHVKSPYVMYLKVKAFVLEPGPRTDDPTKGGIIDSDGEVLARGNGSYKCDQKALMSYDKLQISVDQ  472 (481)
T ss_pred             HHHHHHHHHHHhCCCccCCCceEEEEEEEEEEEECCcccCcCcCCeEEECCcccCCCCceeeeccccccccCceEEEEcC
Confidence            99999999999999999999999999999999985322122346789999999999999999999999999999999999


Q ss_pred             CccccccCC
Q 011290          481 GLATLFSPV  489 (489)
Q Consensus       481 ~l~~~~~~~  489 (489)
                      ||+|+|||+
T Consensus       473 ~~~~~~~~~  481 (481)
T PLN02958        473 GLATLFSPV  481 (481)
T ss_pred             CceEeecCC
Confidence            999999995

>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PLN02204 diacylglycerol kinase Back     alignment and domain information
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>PRK13337 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13059 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13055 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13057 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK00861 putative lipid kinase; Reviewed Back     alignment and domain information
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>TIGR03702 lip_kinase_YegS lipid kinase YegS Back     alignment and domain information
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family Back     alignment and domain information
>PRK12361 hypothetical protein; Provisional Back     alignment and domain information
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ] Back     alignment and domain information
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed) Back     alignment and domain information
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed) Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism] Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism] Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02727 NAD kinase Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>PF11711 Tim54: Inner membrane protein import complex subunit Tim54; InterPro: IPR021056 Mitochondrial function depends on the import of hundreds of different proteins synthesised in the cytosol Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C Back     alignment and domain information
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins Back     alignment and domain information
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD) Back     alignment and domain information
>cd08550 GlyDH-like Glycerol_dehydrogenase-like Back     alignment and domain information
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate Back     alignment and domain information
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase Back     alignment and domain information
>PRK09423 gldA glycerol dehydrogenase; Provisional Back     alignment and domain information
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like Back     alignment and domain information
>KOG4180 consensus Predicted kinase [General function prediction only] Back     alignment and domain information
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria Back     alignment and domain information
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional Back     alignment and domain information
>cd08190 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) involved in gamma-hydroxybutyrate metabolism Back     alignment and domain information
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like Back     alignment and domain information
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme Back     alignment and domain information
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process Back     alignment and domain information
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis Back     alignment and domain information
>TIGR02638 lactal_redase lactaldehyde reductase Back     alignment and domain information
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway Back     alignment and domain information
>cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) Back     alignment and domain information
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like Back     alignment and domain information
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner Back     alignment and domain information
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor Back     alignment and domain information
>PRK10586 putative oxidoreductase; Provisional Back     alignment and domain information
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH) Back     alignment and domain information
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like Back     alignment and domain information
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS) Back     alignment and domain information
>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion] Back     alignment and domain information
>PRK09860 putative alcohol dehydrogenase; Provisional Back     alignment and domain information
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed Back     alignment and domain information
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics Back     alignment and domain information
>COG0061 nadF NAD kinase [Coenzyme metabolism] Back     alignment and domain information
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD) Back     alignment and domain information
>TIGR01357 aroB 3-dehydroquinate synthase Back     alignment and domain information
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase Back     alignment and domain information
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PRK15454 ethanol dehydrogenase EutG; Provisional Back     alignment and domain information
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1 Back     alignment and domain information
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria Back     alignment and domain information
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism Back     alignment and domain information
>COG0371 GldA Glycerol dehydrogenase and related enzymes [Energy production and conversion] Back     alignment and domain information
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like Back     alignment and domain information
>PLN02834 3-dehydroquinate synthase Back     alignment and domain information
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed Back     alignment and domain information
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query489
2qv7_A337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 3e-42
3s40_A304 Diacylglycerol kinase; structural genomics, the ce 7e-41
2bon_A332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 1e-34
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Length = 337 Back     alignment and structure
 Score =  152 bits (386), Expect = 3e-42
 Identities = 71/361 (19%), Positives = 125/361 (34%), Gaps = 76/361 (21%)

Query: 110 KRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDG 169
           KR  I  NP  GK+   +  L D    LE A  + +   T +   A    +      YD 
Sbjct: 25  KRARIIYNPTSGKEQFKRE-LPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDV 83

Query: 170 IVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCK 229
           ++   GDG L EVVNG+ E+ +     +  LGV+P      GT N   ++L      P  
Sbjct: 84  LIAAGGDGTLNEVVNGIAEKPN-----RPKLGVIP-----MGTVNDFGRAL----HIPND 129

Query: 230 ASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADI--DIESEKYRWMGSARID 287
              A+  +I GH   +D+  +      F  + + A G +  +  +  S+    +G     
Sbjct: 130 IMGALDVIIEGHSTKVDIGKM--NNRYF--INLAAGGQLTQVSYETPSKLKSIVGPFAYY 185

Query: 288 FYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGP 347
               + +  ++  + R+ +    G    GE   +                          
Sbjct: 186 IKGFEMLPQMKAVDLRIEY---DGNVFQGEALLFF------------------------- 217

Query: 348 DVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSL 407
                     +     +                 PDAK  DGY  LII++      L  +
Sbjct: 218 ----------LGLTNSM---------AG-FEKLVPDAKLDDGYFTLIIVEKSNLAELGHI 257

Query: 408 LSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKS 467
           ++  ++G H + P V Y K KA  +           +  ++ DGE   +    +   ++ 
Sbjct: 258 MTLASRGEHTKHPKVIYEKAKAINI-------SSFTDLQLNVDGEYGGKLPANFLNLERH 310

Query: 468 L 468
           +
Sbjct: 311 I 311
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Length = 304 Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Length = 332 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query489
3s40_A304 Diacylglycerol kinase; structural genomics, the ce 100.0
2qv7_A337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 100.0
2bon_A332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 100.0
2an1_A292 Putative kinase; structural genomics, PSI, protein 99.52
1yt5_A258 Inorganic polyphosphate/ATP-NAD kinase; domain 1: 99.38
1u0t_A307 Inorganic polyphosphate/ATP-NAD kinase; alpha-beta 99.32
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 99.21
3afo_A388 NADH kinase POS5; alpha/beta+BETA sandwich, ATP-bi 97.96
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 96.68
3pfn_A365 NAD kinase; structural genomics consortium, SNP, S 95.56
1o2d_A371 Alcohol dehydrogenase, iron-containing; TM0920, st 95.08
3ce9_A354 Glycerol dehydrogenase; NP_348253.1, 3-dehydroquin 94.07
3uhj_A387 Probable glycerol dehydrogenase; structural genomi 93.79
1jq5_A370 Glycerol dehydrogenase; oxidoreductase, NAD, glyce 93.39
3bfj_A387 1,3-propanediol oxidoreductase; opportunistic path 93.39
3ox4_A383 Alcohol dehydrogenase 2; iron, NAD, oxidoreductase 92.99
3okf_A390 3-dehydroquinate synthase; structural genomics, ce 92.88
1vlj_A407 NADH-dependent butanol dehydrogenase; TM0820, stru 92.77
1rrm_A386 Lactaldehyde reductase; structural genomics, dehyd 91.81
1ta9_A450 Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosa 91.71
1sg6_A393 Pentafunctional AROM polypeptide; shikimate pathwa 90.25
1kq3_A376 Glycerol dehydrogenase; structural genomics, joint 88.68
1oj7_A408 Hypothetical oxidoreductase YQHD; structural genom 87.44
3hl0_A353 Maleylacetate reductase; structur genomics, PSI-2, 86.4
3qbe_A368 3-dehydroquinate synthase; shikimate pathway, myco 86.31
3jzd_A358 Iron-containing alcohol dehydrogenase; YP_298327.1 86.3
2gru_A368 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2 84.22
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Back     alignment and structure
Probab=100.00  E-value=3e-50  Score=405.44  Aligned_cols=291  Identities=23%  Similarity=0.311  Sum_probs=231.2

Q ss_pred             CCCcEEEEEEcCCCCCccccccchHhHHHHHHhCCCcEEEEEeCChhHHHHHHHHhhcCCCceEEEEcCCChHHHHHHHh
Q 011290          107 GRPKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGL  186 (489)
Q Consensus       107 ~rpkr~lviiNP~sG~~~a~~~~~~~v~p~l~~a~i~~~v~~T~~~~ha~el~~~~~~~~~d~IV~vGGDGtl~EVvnGL  186 (489)
                      .+++|++||+||.||++++.+.| +++++.|+.++++++++.|++++||.++++++. +++|.||++|||||+|||+|+|
T Consensus         6 ~~m~~~~vi~Np~sG~~~~~~~~-~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~-~~~d~vv~~GGDGTl~~v~~~l   83 (304)
T 3s40_A            6 TKFEKVLLIVNPKAGQGDLHTNL-TKIVPPLAAAFPDLHILHTKEQGDATKYCQEFA-SKVDLIIVFGGDGTVFECTNGL   83 (304)
T ss_dssp             CSCSSEEEEECTTCSSSCHHHHH-HHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHH
T ss_pred             CCCCEEEEEECcccCCCchHHHH-HHHHHHHHHcCCeEEEEEccCcchHHHHHHHhh-cCCCEEEEEccchHHHHHHHHH
Confidence            35789999999999999998888 589999999999999999999999999999986 4899999999999999999999


Q ss_pred             hcCcCccccCCCcEEEecCcCCCCcccccceeccccccCCCCcHHHHHHHHHcCCeeeeeEEEEEeCCeeEEEEEeeeee
Q 011290          187 LEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWG  266 (489)
Q Consensus       187 ~~~~~~~~~~~~plgiIP~~~~~~GSgN~~a~sl~~~~g~~~~~~~A~~~Ii~G~~~~lDl~~v~~~~~~~fs~~~~~~G  266 (489)
                      +.+.     .++|||+||+     ||+|+||++|    |+|.++..|+..|++|+.+++|++.+++   ++|.+ ++++|
T Consensus        84 ~~~~-----~~~~l~iiP~-----Gt~N~~ar~l----g~~~~~~~a~~~i~~g~~~~iDlg~v~~---~~F~~-~~~~G  145 (304)
T 3s40_A           84 APLE-----IRPTLAIIPG-----GTCNDFSRTL----GVPQNIAEAAKLITKEHVKPVDVAKANG---QHFLN-FWGIG  145 (304)
T ss_dssp             TTCS-----SCCEEEEEEC-----SSCCHHHHHT----TCCSSHHHHHHHHTTCCEEEEEEEEETT---EEESS-EEEEC
T ss_pred             hhCC-----CCCcEEEecC-----CcHHHHHHHc----CCCccHHHHHHHHHhCCeEEEEEEEECC---EEEEE-EEeeh
Confidence            9853     3799999999     9999999999    8998999999999999999999999963   66654 79999


Q ss_pred             eeecccccc--ccccccCchhhHHHHHHHHHhccccceEEEEecCCCCCCCCCCCcccccCcCCCCCCCCCccccccccc
Q 011290          267 LVADIDIES--EKYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGY  344 (489)
Q Consensus       267 ~~adv~~~s--e~~R~mG~~ry~~~~l~~l~~~r~y~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (489)
                      |+|++..+.  +.+|++|+++|.+++++.+++.+.|+.+|.+                                      
T Consensus       146 ~da~v~~~~~~~~k~~~G~~~Y~~~~l~~l~~~~~~~~~i~~--------------------------------------  187 (304)
T 3s40_A          146 LVSEVSNNIDAEEKAKLGKIGYYLSTIRTVKNAETFPVKITY--------------------------------------  187 (304)
T ss_dssp             ------------------CHHHHTTTC------CCEEEEEEE--------------------------------------
T ss_pred             HHHHHHHhcCHHHhhcCCchHHHHHHHHHHhhcCCceEEEEE--------------------------------------
Confidence            999998864  4567899999999999999888878777642                                      


Q ss_pred             CCCcccCCCCceEEEeecEEEEEEeeccCCCCCCCcCCCCccCCCeEEEEEEecCChHHHHHHHHhhccCCcccCCcEEE
Q 011290          345 QGPDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAY  424 (489)
Q Consensus       345 ~g~~~~~~~~~w~~i~g~f~~v~v~N~~~~g~~~~~aP~A~~~DG~ldlilv~~~s~~~ll~~l~~~~~G~~~~~~~V~~  424 (489)
                      +|          +.+++++.++.++|.+++|+++.++|+|.++||.||++++++.++..+..++..+..|. ...+.|++
T Consensus       188 dg----------~~~~~~~~~v~v~N~~~~Ggg~~~~p~a~~~DG~Ldv~~v~~~~~~~l~~l~~~~~~g~-~~~~~v~~  256 (304)
T 3s40_A          188 DG----------QVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIGKKLFED-SNENDIFH  256 (304)
T ss_dssp             TT----------EEEEEEEEEEEEECSSEETTEECSSTTCCTTSSCEEEEEEETTCHHHHHHHTTCCCSSC-CCTTTEEE
T ss_pred             CC----------EEEEeEEEEEEEECCCcCCCCcccCCCCcCCCCEEEEEEEccCCHHHHHHHHHHHhcCC-CCCCcEEE
Confidence            11          23567788999999999999999999999999999999999999876666655555565 77899999


Q ss_pred             EEEeEEEEEeCCCCCCCCCCceEEecCCccccCCceeEecCCCccccccEEEEEecCccccccC
Q 011290          425 LKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSP  488 (489)
Q Consensus       425 ~kvk~~~i~~~~~~~~~~~~~~~~vDGE~~~~~~~~~~~~~~~L~~~~p~q~~v~~~l~~~~~~  488 (489)
                      +++++++|++.       ++.++++|||++.               ..|++++|+|+..++++|
T Consensus       257 ~~~~~v~i~~~-------~~~~~~~DGE~~~---------------~~p~~i~v~p~al~v~~p  298 (304)
T 3s40_A          257 VKAKSIHIETE-------EEKEVDTDGESSL---------------HTPCQIELLQGHFTMIYN  298 (304)
T ss_dssp             EEESEEEEEES-------SCCEEEEC--CCE---------------ESSEEEEEEEEEEEEECC
T ss_pred             EEccEEEEEeC-------CCcEEEeCCCCCC---------------CceEEEEEECCeEEEEec
Confidence            99999999986       3578999999974               346667777777777666
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Back     alignment and structure
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens} Back     alignment and structure
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A* Back     alignment and structure
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti} Back     alignment and structure
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A* Back     alignment and structure
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae} Back     alignment and structure
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A* Back     alignment and structure
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor} Back     alignment and structure
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2 Back     alignment and structure
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A* Back     alignment and structure
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe} Back     alignment and structure
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A* Back     alignment and structure
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2 Back     alignment and structure
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2 Back     alignment and structure
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} Back     alignment and structure
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A Back     alignment and structure
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha} Back     alignment and structure
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 489
d2qv7a1312 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Sta 5e-30
d2bona1295 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia 9e-22
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Length = 312 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

 Score =  117 bits (292), Expect = 5e-30
 Identities = 67/361 (18%), Positives = 124/361 (34%), Gaps = 76/361 (21%)

Query: 110 KRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDG 169
           KR  I  NP  GK+   +  L D    LE A  + +   T +   A    +      YD 
Sbjct: 3   KRARIIYNPTSGKEQFKRE-LPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDV 61

Query: 170 IVCVSGDGILVEVVNGLLEREDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCK 229
           ++   GDG L EVVNG+ E+ +     +  LGV+P       T N   ++    +  P  
Sbjct: 62  LIAAGGDGTLNEVVNGIAEKPN-----RPKLGVIPMG-----TVNDFGRA----LHIPND 107

Query: 230 ASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLVADI--DIESEKYRWMGSARID 287
              A+  +I GH   +D+          + + + A G +  +  +  S+    +G     
Sbjct: 108 IMGALDVIIEGHSTKVDI----GKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPFAYY 163

Query: 288 FYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQGP 347
               + +  ++  + R+ +                                         
Sbjct: 164 IKGFEMLPQMKAVDLRIEY----------------------------------------- 182

Query: 348 DVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSL 407
                  +  +  G  +  +L      +      PDAK  DGY  LII++      L  +
Sbjct: 183 -------DGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHI 235

Query: 408 LSNLNKGGHVESPYVAYLKVKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKS 467
           ++  ++G H + P V Y K KA  +           +  ++ DGE   +    +   ++ 
Sbjct: 236 MTLASRGEHTKHPKVIYEKAKAINI-------SSFTDLQLNVDGEYGGKLPANFLNLERH 288

Query: 468 L 468
           +
Sbjct: 289 I 289
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Length = 295 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query489
d2qv7a1312 Diacylglycerol kinase DgkB {Staphylococcus aureus 100.0
d2bona1295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 100.0
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 97.59
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 95.93
d1o2da_359 Alcohol dehydrogenase TM0920 {Thermotoga maritima 95.49
d1vlja_398 NADH-dependent butanol dehydrogenase A (TM0820) {T 94.79
d1kq3a_364 Glycerol dehydrogenase {Thermotoga maritima [TaxId 94.48
d1jq5a_366 Glycerol dehydrogenase {Bacillus stearothermophilu 93.74
d1rrma_385 Lactaldehyde reductase FucO {Escherichia coli [Tax 88.84
d1edza2146 Tetrahydrofolate dehydrogenase/cyclohydrolase {Bak 86.14
d1oj7a_390 Hypothetical oxidoreductase yqhD {Escherichia coli 80.06
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.5e-49  Score=398.79  Aligned_cols=291  Identities=25%  Similarity=0.344  Sum_probs=246.2

Q ss_pred             CcEEEEEEcCCCCCccccccchHhHHHHHHhCCCcEEEEEeCChhHHHHHHHHhhcCCCceEEEEcCCChHHHHHHHhhc
Q 011290          109 PKRLYIFVNPFGGKKIASKIFLDDVKPLLEDANIQFTVQETTQQLHAKEIVKVLDLSKYDGIVCVSGDGILVEVVNGLLE  188 (489)
Q Consensus       109 pkr~lviiNP~sG~~~a~~~~~~~v~p~l~~a~i~~~v~~T~~~~ha~el~~~~~~~~~d~IV~vGGDGtl~EVvnGL~~  188 (489)
                      .||++||+||+||++++.+.| .++.+.|..+++++++++|++++|+.++++++...++|.||++|||||+|||+|||+.
T Consensus         2 ~kr~~vi~NP~SG~~~~~~~~-~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~d~ivv~GGDGTv~~v~~~l~~   80 (312)
T d2qv7a1           2 RKRARIIYNPTSGKEQFKREL-PDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAE   80 (312)
T ss_dssp             CEEEEEEECTTSTTSCHHHHH-HHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEECHHHHHHHHHHHTT
T ss_pred             CceEEEEECcCCCCCcHHHHH-HHHHHHHHHCCCeEEEEEcCCccHHHHHHHHHHHcCCCEEEEEcCCcHHHHHHHHHHh
Confidence            589999999999999998888 4788899999999999999999999999999887889999999999999999999998


Q ss_pred             CcCccccCCCcEEEecCcCCCCcccccceeccccccCCCCcHHHHHHHHHcCCeeeeeEEEEEeCCeeEEEEEeeeeeee
Q 011290          189 REDWNDAIKVPLGVVPADFLDAGTGNGMIKSLLDLVGEPCKASNAILAVIRGHKRLLDVATILQGKTRFHSVLMLAWGLV  268 (489)
Q Consensus       189 ~~~~~~~~~~plgiIP~~~~~~GSgN~~a~sl~~~~g~~~~~~~A~~~Ii~G~~~~lDl~~v~~~~~~~fs~~~~~~G~~  268 (489)
                      ++     .++|||+||+     ||||+||+++    |++.++..|+..+.+|..+++|++.++.   ++|. +++++|++
T Consensus        81 ~~-----~~~~l~iiP~-----GTgN~~ar~l----~~~~~~~~al~~~~~~~~~~id~~~v~~---~~f~-~~~~~G~~  142 (312)
T d2qv7a1          81 KP-----NRPKLGVIPM-----GTVNDFGRAL----HIPNDIMGALDVIIEGHSTKVDIGKMNN---RYFI-NLAAGGQL  142 (312)
T ss_dssp             CS-----SCCEEEEEEC-----SSCCHHHHHT----TCCSSHHHHHHHHHHTCEEEEEEEEETT---EEES-SEEEEECB
T ss_pred             hc-----cccceEEeec-----CCCCcchhhc----cccchHHHHHHhhhcCCcEEecccccCc---ccee-eeeeeehh
Confidence            75     3689999999     9999999999    8889999999999999999999999963   5554 47999999


Q ss_pred             eccccccc--cccccCchhhHHHHHHHHHhccccceEEEEecCCCCCCCCCCCcccccCcCCCCCCCCCcccccccccCC
Q 011290          269 ADIDIESE--KYRWMGSARIDFYALQRILYLRQYNGRVSFVPAPGFENHGEPSTYSEQNICNPIPSQQQPIKILQHGYQG  346 (489)
Q Consensus       269 adv~~~se--~~R~mG~~ry~~~~l~~l~~~r~y~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  346 (489)
                      |++..+.+  .++++|.++|.+++++.+...+.+..++++                                      +|
T Consensus       143 a~~~~~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~i~~--------------------------------------dg  184 (312)
T d2qv7a1         143 TQVSYETPSKLKSIVGPFAYYIKGFEMLPQMKAVDLRIEY--------------------------------------DG  184 (312)
T ss_dssp             CC-------------CGGGSCCCTTTTGGGBCCEEEEEEE--------------------------------------TT
T ss_pred             hHHHHHHHHhhhccccchHHHHHHHHHhhccCceEEEeec--------------------------------------CC
Confidence            99987654  456789999999998888887777666542                                      11


Q ss_pred             CcccCCCCceEEEeecEEEEEEeeccCCCCCCCcCCCCccCCCeEEEEEEecCChHHHHHHHHhhccCCcccCCcEEEEE
Q 011290          347 PDVDLKNLEWRIINGPFVAVWLHNVPWGSENTMAAPDAKFSDGYLDLIIIKDCPKLALFSLLSNLNKGGHVESPYVAYLK  426 (489)
Q Consensus       347 ~~~~~~~~~w~~i~g~f~~v~v~N~~~~g~~~~~aP~A~~~DG~ldlilv~~~s~~~ll~~l~~~~~G~~~~~~~V~~~k  426 (489)
                                +.+++++.++.++|.+++++++.++|++.++||.||+++++..+++++++++..+..|+|...+.|.+++
T Consensus       185 ----------~~~~~~~~~~~v~n~~~~ggg~~i~p~a~~~DG~l~v~~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~  254 (312)
T d2qv7a1         185 ----------NVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEK  254 (312)
T ss_dssp             ----------EEEEEEEEEEEEESSCCCSSCSCSSTTCCSSSSCEEEEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEE
T ss_pred             ----------cceecceeeeeeecccccCCCCccCCccccccCcceEEEEcCCCHHHHHHHHHHHhcCCcCCCCCEEEEE
Confidence                      3456778888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeEEEEEeCCCCCCCCCCceEEecCCccccCCceeEecCCCccccccEEEEEecCccccccC
Q 011290          427 VKAFILEPGALTQEPNREGIIDCDGEVLARGKGTYQCDQKSLMSYDKLQITVDQGLATLFSP  488 (489)
Q Consensus       427 vk~~~i~~~~~~~~~~~~~~~~vDGE~~~~~~~~~~~~~~~L~~~~p~q~~v~~~l~~~~~~  488 (489)
                      +++++|++.       ++.++++|||++...               |++++|+|+..+|+.|
T Consensus       255 ~~~i~I~~~-------~~~~~~iDGE~~~~~---------------p~~i~v~p~al~vlvP  294 (312)
T d2qv7a1         255 AKAINISSF-------TDLQLNVDGEYGGKL---------------PANFLNLERHIDVFAP  294 (312)
T ss_dssp             ESEEEEECS-------SCCEEEETTEEEEES---------------CEEEEEEEEEEEEECC
T ss_pred             eCEEEEEeC-------CCCEEEEcCCCCCCC---------------ceEEEEECCEEEEECC
Confidence            999999976       357899999997544               5555555555555555
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1edza2 c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure