Citrus Sinensis ID: 011355

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
Protein Sequence
MAREQVLIFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKYQSPLI
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHcccEEEEEcccccccccccEEcccEEEEEccccccccccHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHccccEEEEEccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHccccccEEEEEcccccccccccccccHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHcccccEEEEccccHHHHHHHHHHccEEEEcccccccccHHHHHHHHHcccEEEEcccccccEEEEcccEEEEccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEcHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEccccccccHHccccHHHccccccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHcccEEEEEEcccccccccEEEcccEEEEEEcccccccccHHHHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEcHHHHHHHHHHHccccccEEEEEccccHHHccccccHHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHcHcccEEEEccccHHHHHHHHHHccEEEccccccccHHHHHHHHHHccccEEEEcccccccEEEcccccEEEccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
MAREQVLIFSFRSFCCVFFVLSAFSFISFLYwchcsgpcysqnqimtqkqdkfidllwfpsawnhlsfpsnpplKLLKIALFVkkwphrshaggleRHALTLHLALAKRGHELHIFtasclncsfptypisslyfhlskptaagyldqSIVWQQLqtqnstgkpfdvihtesvglrhtrarNLTNVVVSWHGIAYETIHSDIIQELlrtpeepqAYALAERASKVVEEVkffpkyahhvatsdhcGDVLKriymipeeRVHVILNgvdeevfkpdvamgkdfkkkfgipenrsLVLGMAGrlvkdkghPLMFEALKQLLAENDTFRRSTVFLvagdgpwgaryrdlgtnvivlgpldqtRLAMFYNAIDifvnptlraqgldHTVLEAMLSGKPLMATRLASIVGSVIvgtdmgylfspqVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISndekngennckyqspli
Flexible Loop (DISEMBL)
MAREQVLIFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTEsvglrhtrarnLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPkyahhvatsdhcGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMgkdfkkkfgipenrsLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVagdgpwgaryrDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCisndekngennckyqspli
Low Complexity Region (SEG)
MAREQVLIfsfrsfccvffvLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKYQSPLI
Disordered region (IsUnstruct)
*****VLIFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCIS*****************
Disordered Region (DISOPRED)
**********FRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQI******KFIDLLWFPS****************KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCIS************QSPL*
Disordered Region (DISEMBL)
MAREQVLIFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKYQSPLI
Disordered Region (DISPRO)
*****VLIFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKYQSPLI
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAREQVLIFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKYQSPLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	488	2.2.26 [Sep-21-2011]
Q59002	390	Uncharacterized glycosylt	yes	no	0.614	0.769	0.221	5e-11
C7QKE8	427	D-inositol 3-phosphate gl	yes	no	0.389	0.444	0.269	1e-09
D1BZ82	417	D-inositol 3-phosphate gl	yes	no	0.645	0.755	0.237	2e-09
Q2JRJ4	484	Glycogen synthase 2 OS=Sy	yes	no	0.504	0.508	0.271	1e-08
P71055	384	Putative glycosyltransfer	yes	no	0.299	0.380	0.292	1e-08
P26470	381	Lipopolysaccharide 1,2-N-	yes	no	0.321	0.412	0.256	2e-08
C7MSY6	431	D-inositol 3-phosphate gl	yes	no	0.395	0.447	0.278	3e-08
D5UJ42	443	D-inositol 3-phosphate gl	yes	no	0.366	0.404	0.279	1e-07
C7Q4Y6	418	D-inositol 3-phosphate gl	no	no	0.342	0.399	0.301	1e-07
D3Q051	443	D-inositol 3-phosphate gl	yes	no	0.610	0.672	0.233	7e-07

>sp|Q59002|Y1607_METJA Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1607 PE=3 SV=1

 Score = 69.7 bits (169), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 47/347 (13%)

Query: 77  LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYP-ISSLYF 135
           +KIA+   ++P R   GGL  H   L   L + GHE+ + T   +    P Y  I+ +  
Sbjct: 1   MKIAMVTWEYPPRI-VGGLAIHCKGLAEGLVRNGHEVDVIT---VGYDLPEYENINGVNV 56

Query: 136 HLSKPTAAGYLDQSIVWQQLQTQNSTGK-------PFDVIHTESVGLRHTRARNLTNVVV 188
           +  +P +  +    + W     +    K        +DVIH     + H    NL ++  
Sbjct: 57  YRVRPISHPHF---LTWAMFMAEEMEKKLGILGVDKYDVIHCHD-WMTHFVGANLKHIC- 111

Query: 189 SWHGIAY-ETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKY--AHHVATSDHC 245
               + Y ++IHS          E  +   L    SK +  +++   Y     +  S   
Sbjct: 112 ---RMPYVQSIHS---------TEIGRCGGLYSDDSKAIHAMEYLSTYESCQVITVSKSL 159

Query: 246 GDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGK--DFKKKFGIPENRSLVLGMAGRLV 303
            + +  I+  PE++V VI NG++   F  +++  +  +F++  G+ ++  ++L   GRL 
Sbjct: 160 KEEVCSIFNTPEDKVKVIYNGINPWEFDINLSWEEKINFRRSIGVQDDEKMIL-FVGRLT 218

Query: 304 KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTN------VIVLGPLD 357
             KG   +  A+ ++L      R +   ++AG G       DL         V+ LG ++
Sbjct: 219 YQKGIEYLIRAMPKILE-----RHNAKLVIAGSGDMRDYLEDLCYQLGVRHKVVFLGFVN 273

Query: 358 QTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIV 404
              L   Y + D+ V P++  +      LEAM +G P++ + +  ++
Sbjct: 274 GDTLKKLYKSADVVVIPSVY-EPFGIVALEAMAAGTPVVVSSVGGLM 319

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -

>sp|C7QKE8|MSHA2_CATAD D-inositol 3-phosphate glycosyltransferase 2 OS=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) GN=mshA2 PE=3 SV=1

 Score = 65.5 bits (158), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 25/215 (11%)

Query: 220 ERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG 279
           E  +++V E +        +A +D     L R+Y     RV  +  GVD + F+P     
Sbjct: 156 EPTARLVGEDQVVDAADRLIANTDQEASELVRLYGADPGRVSTVNPGVDLDRFRP--GDK 213

Query: 280 KDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW 339
           +  ++  G+P + +++L   GR+   K   ++  A  +L+A     R   V  V G GP 
Sbjct: 214 RAARESVGLPPDAAVLL-FVGRIQPLKAPDVLLRAAAELIAREPERREKLVVAVVG-GPS 271

Query: 340 GARY----------RDLGTNVIV--LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLE 387
           G+            R LG   +V  + P+DQTRLA +Y A DI V P+  ++      +E
Sbjct: 272 GSGLAEPTHLHRLARRLGIADVVRFVKPVDQTRLADWYRAADIAVVPSY-SESFGLVAIE 330

Query: 388 AMLSGKPLMATRLASIV--------GSVIVGTDMG 414
           A   G P++A R+  +         G+++ G D G
Sbjct: 331 AQACGTPVVAARVGGLATAVADGRSGTLVAGHDPG 365

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) (taxid: 479433)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|D1BZ82|MSHA_XYLCX D-inositol 3-phosphate glycosyltransferase OS=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) GN=mshA PE=3 SV=1

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 145/358 (40%), Gaps = 43/358 (12%)

Query: 71  NPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPI 130
            P + +L +       P    AGG+  + L L  ALA+RG E+ IFT +  +   P   +
Sbjct: 6   GPRVAMLSVHTSPLDQPGTGDAGGMNVYVLELSRALARRGAEVEIFTRATSSAQPPVVDV 65

Query: 131 SSLYFHLSKPTAA-GYLDQSIVWQQL----------QTQNSTGKPFDVIHTESVGLRHTR 179
                 L  P      LD++ +  QL          +   S G  +DV+HT      H  
Sbjct: 66  QPGIRVLHVPAGPFEGLDKNDLPGQLCAFTAGVLRAEAHRSEGW-YDVVHT------HYW 118

Query: 180 ARNLTNVVVS--WHGIAYETIHSDI-IQELLRTPEEPQAYALAERASKVVEEVKFFPKYA 236
                  + +  W      T+H+   ++     P +     + E   +V+ E +      
Sbjct: 119 LSGQAGWLAAERWDVPLVHTMHTMARVKNAALAPGD-----VPEPQGRVIGEEQVVAASD 173

Query: 237 HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP----DVAMGKDFKKKFGIPENR 292
             VA++    + L R+Y    +R+HV+  GVD + F P    D       +++ G+P + 
Sbjct: 174 ALVASTREEAEDLVRLYGADLDRIHVVPPGVDLDTFTPPVPSDATARTALRERLGLPVDS 233

Query: 293 SLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------- 345
            L+L  AGR+   KG  ++ +AL+ L  E     R  V   A   P   R  +       
Sbjct: 234 PLIL-FAGRVQLLKGPDVLVQALEHLPEEV----RLVVLGGASGRPTAVRELEALAHQCG 288

Query: 346 LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASI 403
           +   V+V  P+++ RLA +Y A D+   P+   +       EA   G P++A  +  +
Sbjct: 289 VRDRVLVHPPVERRRLADWYRAADVVAVPS-HNESFGLVAAEAQACGTPVVAAAVGGL 345

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) (taxid: 446471)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|Q2JRJ4|GLGA2_SYNJA Glycogen synthase 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA2 PE=3 SV=1

 Score = 62.0 bits (149), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 121/284 (42%), Gaps = 38/284 (13%)

Query: 233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP--DVAMGKDF-------- 282
           P YA  + TS H G+ L+ +     ER+  ILNG+D E F P  D A+  +F        
Sbjct: 206 PTYAMEIRTSLH-GEGLQDLLAWKGERLRGILNGIDTEKFDPRTDPALEANFSIDDLSGR 264

Query: 283 -------KKKFGIPENRSLVL-GMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVA 334
                  + + G+  N  + L GM  RLV+ KG  L+ + L + LA +D+     V L +
Sbjct: 265 AVNKAALQSRLGLTVNPDVFLMGMVARLVEQKGIDLLIQTLDRFLAYSDS---QFVLLGS 321

Query: 335 GDGPWGARYRDLGT---NVIVLGPLDQTRLA-MFYNAIDIFVNPTLRAQGLDHTVLEAML 390
           G+  +  R R++       +      Q +LA + Y   D+F+ P+ R +    + + AM 
Sbjct: 322 GEAYYEGRIREMAERHPGRMAYQQGYQPQLAQLIYGGADVFLMPS-RFEPCGISQMIAMR 380

Query: 391 SGKPLMATRLASIVGSV-----IVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGL- 444
            G   +A R   +V +V       G   GY F  + E++    Y   A   E  + K   
Sbjct: 381 YGCVPIARRTGGLVDTVSHHIPSKGIGTGYCFD-RYEALD--FYTCLARAWEAFQHKDTW 437

Query: 445 -VARKRGLNL-FTATKMAAAYERLFLCISNDEKNGENNCKYQSP 486
              +KRG+   F+  + A  Y RL+  I N     E       P
Sbjct: 438 QALQKRGMATDFSWQRSALEYLRLYELIMNLPLRPEKTSSENQP 481

Synthesizes alpha-1,4-glucan chains using ADP-glucose.

Synechococcus sp. (strain JA-3-3Ab) (taxid: 321327)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 1

>sp|P71055|EPSF_BACSU Putative glycosyltransferase EpsF OS=Bacillus subtilis (strain 168) GN=epsF PE=2 SV=1

 Score = 62.0 bits (149), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)

Query: 245 CGDVLKRIYM----IPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG 300
           CG+   R       +  ERVH++ NG+D E+F P+     + K   GI  +R L++G   
Sbjct: 153 CGEDAGRFLFGQSNMERERVHLLPNGIDLELFAPNGQAADEEKAARGIAADR-LIIGHVA 211

Query: 301 RLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW------GARYRDLGTNVIVLG 354
           R  + K H  + +    L      F+     ++AGDGP        AR ++L ++V+ LG
Sbjct: 212 RFHEVKNHAFLLKLAAHLKERGIRFQ----LVLAGDGPLCGEIEEEARQQNLLSDVLFLG 267

Query: 355 PLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT 398
              + R+       D+FV P+L  +GL   ++EA  SG P + +
Sbjct: 268 T--EERIHELMRTFDVFVMPSL-YEGLPVVLVEAQASGLPCIIS 308

May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|P26470|WAAK_SALTY Lipopolysaccharide 1,2-N-acetylglucosaminetransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=waaK PE=3 SV=1

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 22/179 (12%)

Query: 255 IPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEA 314
           +P   V ++ NG   E +K +     + +++  I E+ +++L  AGR+  DKG  L+ +A
Sbjct: 158 LPAAAVSIVPNGFCAETYKRNPQ--DNLRQQLNIAEDATVLL-YAGRISPDKGILLLLQA 214

Query: 315 LKQLLAENDTFRRSTVFLVAGDGPWGARY--------------RDLGTNVIVLGPLDQTR 360
            KQL     T R +   +V GD P+ +R               +++GT+ I+ G     +
Sbjct: 215 FKQL----RTLRSNIKLVVVGD-PYASRKGEKAEYQKKVLDAAKEIGTDCIMAGGQSPDQ 269

Query: 361 LAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP 419
           +  FY+  D+ + P+   +      +EAM +GK ++A++   I   V+ G    +L  P
Sbjct: 270 MHNFYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGISEFVLDGITGYHLAEP 328

Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 6

>sp|C7MSY6|MSHA_SACVD D-inositol 3-phosphate glycosyltransferase OS=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) GN=mshA PE=3 SV=1

 Score = 60.5 bits (145), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 19/212 (8%)

Query: 220 ERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG 279
           E  ++V+ E +   +    V  +D   D L R+Y    + V  +  GVD E F+P     
Sbjct: 163 EPRTRVIGEEQVVAEADRLVVNTDVEADQLVRLYDAAPDAVRTVSPGVDLERFRPGSRAA 222

Query: 280 KDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW 339
              +   G+P + ++VL  AGR+   K   ++  A   L+  +   RR  V LVAG GP 
Sbjct: 223 A--RAALGVPAD-AVVLAFAGRIQPLKAPDVLLRATAALVRRDPGLRRRLVVLVAG-GPS 278

Query: 340 GA---RYRDLGTNVIVLGPLDQTR---------LAMFYNAIDIFVNPTLRAQGLDHTVLE 387
           G+   + R L    + LG  D TR         L   Y A D+   P+   +      LE
Sbjct: 279 GSGLEQPRSLMDLAVELGIDDVTRFLPPQGGQDLVNVYRAADVVAVPS-HNESFGLVALE 337

Query: 388 AMLSGKPLMATRLASIVGSVIVGTDMGYLFSP 419
           A   G P++A R+  +   V V  ++  L  P
Sbjct: 338 AQACGTPVVAARVGGL--PVAVDDEVSGLLVP 367

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) (taxid: 471857)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|D5UJ42|MSHA_CELFN D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) GN=mshA PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 18/197 (9%)

Query: 219 AERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAM 278
           AE + +VV E +        VA++      L  +Y     RVHV+  GVD E F+P    
Sbjct: 184 AEPSVRVVGEEQVVADADALVASTPVEARELVELYGADPARVHVVEPGVDLERFRPGGPG 243

Query: 279 GKD-FKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDG 337
            +D  +++ G+P +R +VL  AGR+   K   ++ +A+  L A      R    LV   G
Sbjct: 244 ARDEARRRLGLPTDRPVVL-FAGRVQPLKAPDVLVQAVGVLRASG----RPVPLLVVLGG 298

Query: 338 PWG--ARYRDL---------GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVL 386
           P G     R+L           +V+V  P  +  L  +Y A D+   P+ R++      +
Sbjct: 299 PSGRPTAVRELRALAVTLGVDDDVVVRPPAPRDELVSWYRAADLVAMPS-RSESFGLVAV 357

Query: 387 EAMLSGKPLMATRLASI 403
           EA  SG P++A  +  +
Sbjct: 358 EAQASGTPVLAADVGGL 374

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) (taxid: 446466)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|C7Q4Y6|MSHA1_CATAD D-inositol 3-phosphate glycosyltransferase 1 OS=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) GN=mshA1 PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 19/186 (10%)

Query: 239 VATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGM 298
           VA +    D L  +Y    ERVH +  GVD E+F+P        + + G+P + + VL  
Sbjct: 174 VANTAQEADQLIALYGAAPERVHTVHPGVDLELFRP--GDRDQARARLGLPHD-AFVLLF 230

Query: 299 AGRLVKDKGHPLMFEALKQLL-AENDTFRRSTVFLVAGDGPWGARYRD------------ 345
           AGR+ + KG  ++  A  QLL A+ D  +R  V  V   GP G    D            
Sbjct: 231 AGRVQRLKGPDILMRAAAQLLHADLDLAQRLVVAFVG--GPSGELQADPDQLTKLATDLG 288

Query: 346 LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG 405
           +G  V V  P     LA +Y A  + V P+ RA+      +EA   G P++A  +  +  
Sbjct: 289 IGEQVRVEPPCPHPELADWYRAATLVVVPS-RAETFGLVAVEAQACGTPVVAAAVGGLQT 347

Query: 406 SVIVGT 411
           +V  G 
Sbjct: 348 AVRAGV 353

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) (taxid: 479433)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|D3Q051|MSHA_STANL D-inositol 3-phosphate glycosyltransferase OS=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) GN=mshA PE=3 SV=1

 Score = 55.8 bits (133), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 135/359 (37%), Gaps = 61/359 (16%)

Query: 87  PHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTY-PISSLYFHLSKPTAAGY 145
           P    AGG+  + L     LA RG  + IFT +  +   P   P   +  H         
Sbjct: 37  PGTGDAGGMNVYVLQTARRLADRGVAVEIFTRATSSEQPPALSPSEGITVHYVPAGPFEG 96

Query: 146 LDQSIVWQQLQT------QNSTGKP---FDVIHT-------------ESVGLRHTRARNL 183
           L +  +  QL        +    +P   FDVIH+             E  G+ H  + + 
Sbjct: 97  LSKGDLPSQLCAFTNGVLRAEAAQPPGYFDVIHSHYWLSGQAAWLAAERWGVPHIHSAHT 156

Query: 184 TNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSD 243
              V + H  A +T               P+ +      ++VV E +   +    V  + 
Sbjct: 157 LAKVKNLHLAAEDT---------------PEPF------TRVVGEEQVVAESDALVTNTS 195

Query: 244 HCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV 303
              +VL  +Y    ++V V   GVD EVF P   +    +++ G+P++ +LVLG AGR+ 
Sbjct: 196 SEAEVLVDLYRADPDKVTVTPPGVDPEVFTPGDKLAA--RRRLGLPDD-ALVLGFAGRIQ 252

Query: 304 KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG------------ARYRDLGTNVI 351
             K   ++  A+ +L A N         +V G GP G            A    +   V 
Sbjct: 253 PLKAPDVLVRAVARLRALNPELAPRLRLVVVG-GPSGNGADNPRWLHDLAAELGIADAVT 311

Query: 352 VLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG 410
            L P     LA  + A D+   P+   +      LEA   G P++A  +  +  +V  G
Sbjct: 312 FLKPRAGHELAEVFRACDVVGVPSYN-ETFGLVALEAQACGTPVVAAAVGGLTTAVADG 369

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) (taxid: 446470)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	488
297745985	610	unnamed protein product [Vitis vinifera]	0.977	0.781	0.761	0.0
356547277	484	PREDICTED: D-inositol-3-phosphate glycos	0.987	0.995	0.684	0.0
224104371	411	predicted protein [Populus trichocarpa]	0.842	1.0	0.793	0.0
357517219	489	Glycosyltransferase, putative [Medicago	0.985	0.983	0.684	0.0
255558922	563	glycosyltransferase, putative [Ricinus c	0.850	0.737	0.780	0.0
147777469	591	hypothetical protein VITISV_011267 [Viti	0.848	0.700	0.789	0.0
42568648	505	glycosyl transferase family 1 protein [A	0.959	0.926	0.636	1e-174
10177634	521	glycosyl transferase-like [Arabidopsis t	0.959	0.898	0.617	1e-172
297796871	509	glycosyl transferase family 1 protein [A	0.959	0.919	0.631	1e-171
302759971	497	glycosyltransferase, CAZy family GT4 [Se	0.860	0.845	0.508	1e-121

>gi|297745985|emb|CBI16041.3| unnamed protein product [Vitis vinifera]

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/477 (76%), Positives = 412/477 (86%)

Query: 8   IFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLS 67
           IFSFR  C + FVLS FS ISF+ W   +G    QNQ+  Q Q++FI++L FPSAWNHLS
Sbjct: 130 IFSFRCLCFIIFVLSVFSSISFVIWSQYTGFFDFQNQVTLQNQNQFINILSFPSAWNHLS 189

Query: 68  FPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT 127
           FP+ PP K LKIALFVKKWPH+  AGGLERHALTLHLALA+RGHELHIFT S LN SFP+
Sbjct: 190 FPTGPPPKFLKIALFVKKWPHKHRAGGLERHALTLHLALAQRGHELHIFTTSSLNPSFPS 249

Query: 128 YPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVV 187
           +PI +LYFHLSKPTAAGYLDQ++VW+Q Q QNSTGKPFDVIHTESVGL HTR+RNLTN+ 
Sbjct: 250 FPIGTLYFHLSKPTAAGYLDQAVVWKQFQHQNSTGKPFDVIHTESVGLMHTRSRNLTNLA 309

Query: 188 VSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGD 247
           V+WHGIAYE+IHSDIIQELLRTPEEP A++L ERA KVVEEVKFFP YAHHVATSDH G+
Sbjct: 310 VTWHGIAYESIHSDIIQELLRTPEEPLAFSLTERAMKVVEEVKFFPHYAHHVATSDHVGE 369

Query: 248 VLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKG 307
           VLKRIYMIPEERVH+ILNGVDEE+FKP+ A GKDFKKKFGIP++++LVLG+AGRLVKDKG
Sbjct: 370 VLKRIYMIPEERVHIILNGVDEEIFKPNAAKGKDFKKKFGIPQSKTLVLGIAGRLVKDKG 429

Query: 308 HPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNA 367
           HPLMFEAL Q+L ENDTFR + + LVAGDGPW  RY+DLG  V+VLG L+  +LA FYNA
Sbjct: 430 HPLMFEALMQMLKENDTFRETAIILVAGDGPWSDRYKDLGATVLVLGTLEPAQLASFYNA 489

Query: 368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKA 427
           IDIFVNPTLRAQGLDHT+LEAMLSGKPLMATRLASI GSVIVGT+MGY FSP V S+K  
Sbjct: 490 IDIFVNPTLRAQGLDHTLLEAMLSGKPLMATRLASITGSVIVGTEMGYTFSPTVASLKGT 549

Query: 428 LYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKYQ 484
           LY +W DGR VLE+KG +AR+RGL LFTATKMAAAYERLFLCISNDE+N ++ C YQ
Sbjct: 550 LYRVWHDGRVVLERKGQLARQRGLELFTATKMAAAYERLFLCISNDEENRDSYCTYQ 606

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547277|ref|XP_003542042.1| PREDICTED: D-inositol-3-phosphate glycosyltransferase-like [Glycine max]

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/485 (68%), Positives = 405/485 (83%), Gaps = 3/485 (0%)

Query: 1   MAREQVLIFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCY-SQNQIMTQKQDKFIDLLWF 59
           MA+++  +FSF  FC +  +LS  S I  L W HC   C+ S  Q++ QKQ++ I+LL +
Sbjct: 1   MAKDRGSLFSFHCFCYIIIILSICSIILSLSWSHCCSQCHNSPYQVIVQKQNQPINLLSY 60

Query: 60  PSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTAS 119
           P AWNHL F S PP K LKIALFVKKWP +SHAGGLERHALTLHLALAKRGH+LHIFT S
Sbjct: 61  PFAWNHLMFSSEPPSKFLKIALFVKKWPQKSHAGGLERHALTLHLALAKRGHDLHIFTTS 120

Query: 120 CLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTR 179
             + SF  Y I++++FH SKPT AGYLDQ++VW+Q Q QNST KPFD++HTESVGLR+TR
Sbjct: 121 T-DSSFSNYSINNIHFHFSKPTPAGYLDQALVWEQFQAQNSTSKPFDIVHTESVGLRYTR 179

Query: 180 ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHV 239
           +R +TN+ V+WHGIAYET HSDIIQELLRTP+EPQ  AL ERA KVVEEVKFFP YAHHV
Sbjct: 180 SRYVTNLAVTWHGIAYETFHSDIIQELLRTPQEPQTKALTERAVKVVEEVKFFPNYAHHV 239

Query: 240 ATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMA 299
           ATSDH GD+LKR+YMIPEERVH+ILNGVD+ +F+P+V+ GKDFKK+ GIP+++SLV+G+A
Sbjct: 240 ATSDHAGDILKRVYMIPEERVHIILNGVDQHIFRPNVSKGKDFKKRHGIPDSKSLVIGLA 299

Query: 300 GRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQT 359
           GRLVKDKGHPLMFEALKQ++ EN TF+ S++ +VAGDGPWGARY DLG N++VLGPL+Q 
Sbjct: 300 GRLVKDKGHPLMFEALKQIIEENSTFQESSMVVVAGDGPWGARYTDLGANMLVLGPLEQA 359

Query: 360 RLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP 419
            LA FYNAID+FVNPTLRAQGLDHT+LEAML+GKP+MATRLASI+GSVIVG +MGY F+P
Sbjct: 360 ELASFYNAIDVFVNPTLRAQGLDHTLLEAMLTGKPVMATRLASIIGSVIVGNEMGYTFAP 419

Query: 420 QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGEN 479
            V ++KKA+Y +W  GREVL+KKG VA +RG+ LFTATKM  AYERLFLC+S+   + E+
Sbjct: 420 TVSALKKAIYELWVSGREVLDKKGHVALQRGVQLFTATKMVYAYERLFLCLSS-VTHEEH 478

Query: 480 NCKYQ 484
            C+YQ
Sbjct: 479 FCEYQ 483

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104371|ref|XP_002313414.1| predicted protein [Populus trichocarpa] gi|222849822|gb|EEE87369.1| predicted protein [Populus trichocarpa]

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/411 (79%), Positives = 365/411 (88%)

Query: 62  AWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCL 121
           AWNHLSFPS  P K LKIALFVKKWPHRS AGGLERHALTLHLALAKRGHELHIFT S  
Sbjct: 1   AWNHLSFPSKLPSKYLKIALFVKKWPHRSLAGGLERHALTLHLALAKRGHELHIFTTSPS 60

Query: 122 NCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRAR 181
           N SFP YP+S+LYFHLSKPTAAGYLDQ+IVW+Q QTQNSTGK FD++HTESVGL HTR+R
Sbjct: 61  NSSFPRYPMSNLYFHLSKPTAAGYLDQAIVWKQFQTQNSTGKAFDIVHTESVGLLHTRSR 120

Query: 182 NLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVAT 241
           NLTN+ V+WHGIAYETIH+DIIQELLR P+E QAYAL ER +KVVEEV+FFP YAHHVAT
Sbjct: 121 NLTNLAVTWHGIAYETIHTDIIQELLRNPDEQQAYALTERITKVVEEVRFFPHYAHHVAT 180

Query: 242 SDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR 301
           SDH GD+L+RIYMIPEERVHVILNGVDEE+FKPD + G+ FK+KFG+ ++RSLVLGMAGR
Sbjct: 181 SDHAGDILRRIYMIPEERVHVILNGVDEEIFKPDPSKGEAFKQKFGVAKSRSLVLGMAGR 240

Query: 302 LVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRL 361
           LVKDKGHPLMFEALKQ+L EN TFR +T+ L+AGDGPWG RYRDLGTN +VLGPL+Q +L
Sbjct: 241 LVKDKGHPLMFEALKQMLVENGTFRENTIVLIAGDGPWGDRYRDLGTNTLVLGPLEQAQL 300

Query: 362 AMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQV 421
           A FYNAIDIFVNPTLRAQGLDHT+LEAMLSGK +M+TR+ASI GSVIV T++GY FSP V
Sbjct: 301 ASFYNAIDIFVNPTLRAQGLDHTLLEAMLSGKSVMSTRVASITGSVIVSTEIGYTFSPMV 360

Query: 422 ESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN 472
            S+K ALY +W DGR VLE KG  +R+RGL LFTATKMAAAYERLFLCISN
Sbjct: 361 VSLKNALYRVWEDGRRVLEMKGQASRQRGLQLFTATKMAAAYERLFLCISN 411

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517219|ref|XP_003628898.1| Glycosyltransferase, putative [Medicago truncatula] gi|355522920|gb|AET03374.1| Glycosyltransferase, putative [Medicago truncatula]

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/488 (68%), Positives = 396/488 (81%), Gaps = 7/488 (1%)

Query: 1   MAREQVLIFSFRSFCCVFFVLSAFSFISFLYWCHCSGPCYS--QNQIMTQKQDKFIDLLW 58
           MA+++  +F F+  C +  + S  S I FL W HC   CYS    Q   Q Q + I+LL 
Sbjct: 1   MAKDRSSVFRFQKICYIVVIFSICSIILFLSWTHCCSQCYSPFAYQTTLQNQTQPINLLS 60

Query: 59  FPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTA 118
           +P AWN+L FPSNP  K LKIALFVKKWP RSHAGGLERHALTLHLALAKRGHELHIFT 
Sbjct: 61  YPLAWNNLIFPSNPASKFLKIALFVKKWPQRSHAGGLERHALTLHLALAKRGHELHIFTT 120

Query: 119 SCLNCSFPTYPI-SSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRH 177
           S  N SF  + I ++++FH SKP+ AGYLDQ+IVW+Q Q QNST +PFD++HTESVGLR+
Sbjct: 121 ST-NPSFSNHSIDNNVHFHFSKPSPAGYLDQAIVWEQYQLQNSTIRPFDIVHTESVGLRY 179

Query: 178 TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAH 237
           TR+R +TN+ V+WHGIAYETIHSDIIQELLR P+EPQ  A+ ER  KVVEE+KFF  YAH
Sbjct: 180 TRSRYITNLAVTWHGIAYETIHSDIIQELLRPPQEPQTNAIKERTIKVVEEIKFFTNYAH 239

Query: 238 HVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLG 297
           HVATSDH GD+LK +YMIPEERVH+ILNGVD++VFK D + GK+FKKK G+P ++SLV+G
Sbjct: 240 HVATSDHAGDILKTVYMIPEERVHIILNGVDQQVFKQDNSKGKEFKKKHGVPNSKSLVIG 299

Query: 298 MAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLD 357
           +AGRLVKDKGHPLMFEALKQ++ EN+TF  S++ LVAGDGPW ARYR+LG+NV+VLGPL+
Sbjct: 300 LAGRLVKDKGHPLMFEALKQIIEENNTFLESSMVLVAGDGPWAARYRELGSNVLVLGPLE 359

Query: 358 QTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLF 417
           Q  LA FYNAIDIFVNPTLRAQGLDHT+LEAMLSGKP+MATRLASI+GSVIVG +MGY F
Sbjct: 360 QGELASFYNAIDIFVNPTLRAQGLDHTLLEAMLSGKPVMATRLASILGSVIVGNEMGYTF 419

Query: 418 SPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNG 477
           SP V S+KKA+Y  W  GR +L KKG VAR+RGL LFTATKM AAYERLFLCIS+   N 
Sbjct: 420 SPTVISLKKAIYETWVGGRGILNKKGQVARERGLQLFTATKMVAAYERLFLCISS--LNH 477

Query: 478 ENN-CKYQ 484
           E+N C+Y 
Sbjct: 478 EDNFCEYH 485

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558922|ref|XP_002520484.1| glycosyltransferase, putative [Ricinus communis] gi|223540326|gb|EEF41897.1| glycosyltransferase, putative [Ricinus communis]

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/415 (78%), Positives = 363/415 (87%)

Query: 69  PSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTY 128
           P  PP KLLKIALFVKKWP RSHAGGLERHALTLHLALAKRGHELH+FT S  N SFP Y
Sbjct: 149 PLGPPPKLLKIALFVKKWPDRSHAGGLERHALTLHLALAKRGHELHVFTTSPPNSSFPRY 208

Query: 129 PISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVV 188
            IS+LYFHLSKPTAAGYL+Q++VW+  QTQN TG+PFDV+HTESVGL H R+RNLTN+ V
Sbjct: 209 SISNLYFHLSKPTAAGYLEQALVWKLFQTQNLTGRPFDVVHTESVGLWHGRSRNLTNLAV 268

Query: 189 SWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDV 248
           SWHGIAYETIH+DIIQE+LR PEE  AYAL ER +KVVEEVKFFP YAHHVATSDH GDV
Sbjct: 269 SWHGIAYETIHTDIIQEILRNPEEQPAYALTERVAKVVEEVKFFPSYAHHVATSDHAGDV 328

Query: 249 LKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH 308
           LKRIYMIPEERVHVILNGVDEE+FKPD + G++FK+KFG+ E+RSLVLGMAGRLVKDKGH
Sbjct: 329 LKRIYMIPEERVHVILNGVDEEIFKPDASKGQEFKQKFGVSESRSLVLGMAGRLVKDKGH 388

Query: 309 PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAI 368
           PLMFEALKQ+  END FR STV LVAGDGPWG+RYR+LG+N +VLGPLDQ +LA FYNAI
Sbjct: 389 PLMFEALKQMHMENDKFRESTVILVAGDGPWGSRYRELGSNALVLGPLDQAQLARFYNAI 448

Query: 369 DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKAL 428
           DIFVNPTLRAQGLDHT+LEAMLSGKP++ATR+ASI GSV+V  +MGY+FSP VES+K AL
Sbjct: 449 DIFVNPTLRAQGLDHTLLEAMLSGKPVIATRVASITGSVVVSEEMGYVFSPTVESLKNAL 508

Query: 429 YGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKY 483
           Y +   GR VLEKKG VAR +GL LFTATKMAAAYERLFLCIS DE   E+ C++
Sbjct: 509 YRVLEHGRGVLEKKGQVARHKGLQLFTATKMAAAYERLFLCISKDENRKEDYCQF 563

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147777469|emb|CAN71704.1| hypothetical protein VITISV_011267 [Vitis vinifera]

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/414 (78%), Positives = 367/414 (88%)

Query: 71  NPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPI 130
            PP K LKIALFVKKWPH+  AGGLERHALTLHLALA+RGHELHIFT S LN SFP++PI
Sbjct: 174 GPPPKFLKIALFVKKWPHKHRAGGLERHALTLHLALAQRGHELHIFTTSSLNPSFPSFPI 233

Query: 131 SSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSW 190
            +LYFHLSKPTAAGYLDQ++VW+Q Q QNSTGKPFDVIHTESVGL HTR+RNLTN+ V+W
Sbjct: 234 GTLYFHLSKPTAAGYLDQAVVWKQFQHQNSTGKPFDVIHTESVGLMHTRSRNLTNLAVTW 293

Query: 191 HGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLK 250
           HGIAYE+IHSDIIQELLRTPEEP A++L ERA KVVEEVKFFP YAHHVATSDH G+VLK
Sbjct: 294 HGIAYESIHSDIIQELLRTPEEPLAFSLTERAMKVVEEVKFFPHYAHHVATSDHVGEVLK 353

Query: 251 RIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL 310
           RIYMIPEERVH+ILNGVDEE+FKP+ A GKDFKKKFGIP++++LVLG+AGRLVKDKGHPL
Sbjct: 354 RIYMIPEERVHIILNGVDEEIFKPNAAKGKDFKKKFGIPQSKTLVLGIAGRLVKDKGHPL 413

Query: 311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDI 370
           MFEAL Q+L ENDTFR + + LVAGDGPW  RY+DLG  V+VLG L+  +LA FYNAIDI
Sbjct: 414 MFEALMQMLKENDTFRETAIILVAGDGPWSDRYKDLGATVLVLGTLEPAQLASFYNAIDI 473

Query: 371 FVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYG 430
           FVNPTLRAQGLDHT+LEAMLSGKPLMATRLASI GSVIVGT+MGY FSP V S+K  LY 
Sbjct: 474 FVNPTLRAQGLDHTLLEAMLSGKPLMATRLASITGSVIVGTEMGYTFSPTVASLKGTLYR 533

Query: 431 IWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKYQ 484
           +W DGR VLE+KG +AR+RGL LFTATKMAAAYERLFLCISNDE+N ++ C YQ
Sbjct: 534 VWHDGRVVLERKGQLARQRGLELFTATKMAAAYERLFLCISNDEENRDSYCTYQ 587

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42568648|ref|NP_200715.2| glycosyl transferase family 1 protein [Arabidopsis thaliana] gi|332009754|gb|AED97137.1| glycosyl transferase family 1 protein [Arabidopsis thaliana]

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 319/501 (63%), Positives = 379/501 (75%), Gaps = 33/501 (6%)

Query: 1   MAREQVLI---FSFRSFCCVFFVLSAFSFISFLYWCHCSGPC---YSQNQIMT----QKQ 50
           MARE  L+   FSFR + C F +L +        + H +  C   Y  N  +     Q+ 
Sbjct: 1   MARENPLMSFSFSFR-YLCHFALLLSLLSFVSFLFRHNTSLCSCLYDHNTYVNTFDHQQN 59

Query: 51  DKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRG 110
           ++ IDLL F SAWNHL+FPS P  K LKIA+ VKKWP +S AGGLERHALTLHLALA RG
Sbjct: 60  NETIDLLRFSSAWNHLTFPSKPK-KTLKIAVVVKKWPRKSQAGGLERHALTLHLALANRG 118

Query: 111 HELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHT 170
           HELH+FTA+  + SFP Y + +L FHLS+PTAAGYLDQ+ V QQLQTQN++G+PFDVIHT
Sbjct: 119 HELHVFTAA--SPSFPEYQLKNLMFHLSEPTAAGYLDQASVSQQLQTQNASGRPFDVIHT 176

Query: 171 ESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPE--------------EPQAY 216
           ESVGL HTRA+NL NVV SWHGIAYET HSDIIQELLR  +               P + 
Sbjct: 177 ESVGLLHTRAKNLRNVVASWHGIAYETFHSDIIQELLRQADIAAATAAGTEEEQPPPSSP 236

Query: 217 ALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDV 276
           AL ERA +VVEEVKFF +YAHHVATSDHCGDVLKRIYMIPEERVH+ILNGVDE VFKPDV
Sbjct: 237 ALTERAKRVVEEVKFFQRYAHHVATSDHCGDVLKRIYMIPEERVHIILNGVDENVFKPDV 296

Query: 277 AMGKDFKKKFGIPENRS----LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFL 332
           +  + F++KFG+   ++    LVLG+AGRLV+DKGHPLMF ALK++  EN   R + V L
Sbjct: 297 SKRESFREKFGVRSGKNKKSPLVLGIAGRLVRDKGHPLMFSALKRVFEENKEARENVVVL 356

Query: 333 VAGDGPWGARYRDLG-TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLS 391
           VAGDGPWG RY+DLG TNVIVLGPLDQ +LA FYNAID+FVNPTLRAQGLDHT+LEAM+S
Sbjct: 357 VAGDGPWGNRYKDLGSTNVIVLGPLDQEKLAGFYNAIDVFVNPTLRAQGLDHTLLEAMVS 416

Query: 392 GKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGL 451
           GKP++ATRLASI GSV+VG  +GY FSP VES+ +A+  + +DG E L++KG  AR+R L
Sbjct: 417 GKPVLATRLASITGSVVVGPHLGYTFSPNVESLTEAILRVVSDGTEELQRKGKEARERSL 476

Query: 452 NLFTATKMAAAYERLFLCISN 472
            LFTATKMA +YER FLCIS+
Sbjct: 477 RLFTATKMADSYERFFLCISD 497

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10177634|dbj|BAB10782.1| glycosyl transferase-like [Arabidopsis thaliana]

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 319/517 (61%), Positives = 379/517 (73%), Gaps = 49/517 (9%)

Query: 1   MAREQVLI---FSFRSFCCVFFVLSAFSFISFLYWCHCSGPC---YSQNQIMT----QKQ 50
           MARE  L+   FSFR + C F +L +        + H +  C   Y  N  +     Q+ 
Sbjct: 1   MARENPLMSFSFSFR-YLCHFALLLSLLSFVSFLFRHNTSLCSCLYDHNTYVNTFDHQQN 59

Query: 51  DKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRG 110
           ++ IDLL F SAWNHL+FPS P  K LKIA+ VKKWP +S AGGLERHALTLHLALA RG
Sbjct: 60  NETIDLLRFSSAWNHLTFPSKPK-KTLKIAVVVKKWPRKSQAGGLERHALTLHLALANRG 118

Query: 111 HELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ-------------- 156
           HELH+FTA+  + SFP Y + +L FHLS+PTAAGYLDQ+ V QQLQ              
Sbjct: 119 HELHVFTAA--SPSFPEYQLKNLMFHLSEPTAAGYLDQASVSQQLQLKKRNLTNAIFLRK 176

Query: 157 --TQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPE--- 211
             TQN++G+PFDVIHTESVGL HTRA+NL NVV SWHGIAYET HSDIIQELLR  +   
Sbjct: 177 SQTQNASGRPFDVIHTESVGLLHTRAKNLRNVVASWHGIAYETFHSDIIQELLRQADIAA 236

Query: 212 -----------EPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERV 260
                       P + AL ERA +VVEEVKFF +YAHHVATSDHCGDVLKRIYMIPEERV
Sbjct: 237 ATAAGTEEEQPPPSSPALTERAKRVVEEVKFFQRYAHHVATSDHCGDVLKRIYMIPEERV 296

Query: 261 HVILNGVDEEVFKPDVAMGKDFKKKFGIPENRS----LVLGMAGRLVKDKGHPLMFEALK 316
           H+ILNGVDE VFKPDV+  + F++KFG+   ++    LVLG+AGRLV+DKGHPLMF ALK
Sbjct: 297 HIILNGVDENVFKPDVSKRESFREKFGVRSGKNKKSPLVLGIAGRLVRDKGHPLMFSALK 356

Query: 317 QLLAENDTFRRSTVFLVAGDGPWGARYRDLG-TNVIVLGPLDQTRLAMFYNAIDIFVNPT 375
           ++  EN   R + V LVAGDGPWG RY+DLG TNVIVLGPLDQ +LA FYNAID+FVNPT
Sbjct: 357 RVFEENKEARENVVVLVAGDGPWGNRYKDLGSTNVIVLGPLDQEKLAGFYNAIDVFVNPT 416

Query: 376 LRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADG 435
           LRAQGLDHT+LEAM+SGKP++ATRLASI GSV+VG  +GY FSP VES+ +A+  + +DG
Sbjct: 417 LRAQGLDHTLLEAMVSGKPVLATRLASITGSVVVGPHLGYTFSPNVESLTEAILRVVSDG 476

Query: 436 REVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN 472
            E L++KG  AR+R L LFTATKMA +YER FLCIS+
Sbjct: 477 TEELQRKGKEARERSLRLFTATKMADSYERFFLCISD 513

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796871|ref|XP_002866320.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297312155|gb|EFH42579.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 317/502 (63%), Positives = 376/502 (74%), Gaps = 34/502 (6%)

Query: 1   MAREQVLI---FSFRSFCCVFFVLSAFSFISFLYWCHCSGPC---YSQNQIMT-----QK 49
           MARE  L+   FSFR + C F +L +        + H +  C   Y  N           
Sbjct: 1   MARENQLMSFSFSFR-YLCHFALLLSLLSFVSFLFRHNTSLCSCLYDHNPKANTFDHYHH 59

Query: 50  QDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKR 109
            ++ IDLL F SAWNHL+FPS P  K LKIA+ VKKWP +S AGGLERHALTLHLALA R
Sbjct: 60  NNETIDLLRFSSAWNHLTFPSKPK-KTLKIAVVVKKWPRKSQAGGLERHALTLHLALANR 118

Query: 110 GHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIH 169
           GHE+H+FTA+  + SFP Y + +L FHLS+PTAAGYLDQ+ V  QLQTQN++G+PFDVIH
Sbjct: 119 GHEVHVFTAA--SPSFPEYQLKNLLFHLSEPTAAGYLDQASVSLQLQTQNASGRPFDVIH 176

Query: 170 TESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLR-----------TPEE---PQA 215
           TESVGL HTRA+NL NVV SWHGIAYET HSDIIQELLR           T EE   P +
Sbjct: 177 TESVGLLHTRAKNLRNVVASWHGIAYETFHSDIIQELLRQADIAAAAAAGTEEEQPPPSS 236

Query: 216 YALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPD 275
            AL ERA +VVEEVKFF +YAHHVATSDHCGDVLKRIYMIPEERVH+ILNGVDE VFKPD
Sbjct: 237 PALTERAKRVVEEVKFFQRYAHHVATSDHCGDVLKRIYMIPEERVHIILNGVDENVFKPD 296

Query: 276 VAMGKDFKKKFGIPENRS----LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVF 331
           V+  + F++K+G+   ++    LVLG+AGRLV+DKGHPLMF ALK++  E+   R + V 
Sbjct: 297 VSKRESFREKYGVRSGKNKKPPLVLGIAGRLVRDKGHPLMFAALKRVFEESKEARENVVV 356

Query: 332 LVAGDGPWGARYRDLGTN-VIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAML 390
           LVAGDGPWG RYRDLG+N VIVLGPLDQ RLA FYNAID+FVNPTLRAQGLDHT+LEAM+
Sbjct: 357 LVAGDGPWGNRYRDLGSNNVIVLGPLDQERLAEFYNAIDVFVNPTLRAQGLDHTLLEAMV 416

Query: 391 SGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRG 450
           SGKP++ATRLASI GSV+VG  +GY FSP VES+ +A+  + +DG E L++KG  AR+R 
Sbjct: 417 SGKPVLATRLASITGSVVVGPHLGYTFSPNVESLSEAISRVVSDGTEELQRKGKEARERS 476

Query: 451 LNLFTATKMAAAYERLFLCISN 472
           L LFTA KMA +YER FLCIS+
Sbjct: 477 LRLFTANKMADSYERFFLCISD 498

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302759971|ref|XP_002963408.1| glycosyltransferase, CAZy family GT4 [Selaginella moellendorffii] gi|300168676|gb|EFJ35279.1| glycosyltransferase, CAZy family GT4 [Selaginella moellendorffii]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/448 (50%), Positives = 294/448 (65%), Gaps = 28/448 (6%)

Query: 55  DLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELH 114
           DL    +AWN L F   P  + L+IALFVKKWP     GGLERHALTLH  LA RGHE+H
Sbjct: 52  DLRQMEAAWNRLCF--GPIQERLRIALFVKKWPVGGVPGGLERHALTLHRNLAARGHEIH 109

Query: 115 IFTASCLNCSFPTYPISS---------LYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKP- 164
           ++T++      P   +           L+ H S+P A G  D    W Q    NST    
Sbjct: 110 VYTSAAAGSDNPEELLDDQQDHGERGLLHVHFSRPNAGGGFDYHRAWDQFLADNSTHPGG 169

Query: 165 FDVIHTESVGLRHTRARNL-TNVVVSWHGIAYETIHSDIIQELLRTPEEPQA----YALA 219
           FD++H+ESV L H +A+ L +N+  SWHGI YE IHSD++Q+L+R P EP++     +L 
Sbjct: 170 FDIVHSESVALPHWKAQLLGSNLAASWHGIGYEIIHSDLVQDLVRKPGEPRSADLQRSLG 229

Query: 220 ERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG 279
           ER ++V +E+KFFP Y HHVATSD+ GDVL+ IY IP   VH ILNGVDE  F+P +  G
Sbjct: 230 ERLTRVADEIKFFPSYRHHVATSDYVGDVLQTIYEIPLRNVHTILNGVDESRFRPSLDAG 289

Query: 280 KDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFL-VAGDGP 338
             F++K+G+P N SLV G AGRLV+DKGHPL+FEA  ++ A     R   VFL VAG GP
Sbjct: 290 SAFRRKYGVPVNASLVFGAAGRLVRDKGHPLLFEAFSRIAA-----RHPGVFLLVAGHGP 344

Query: 339 WGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT 398
           WG RYR+L  N   LGP+D   LA FYNA+D+FVNPTLR+QGLDHT+LEAM  GKPL+AT
Sbjct: 345 WGDRYRELAPNAKTLGPMDPAHLADFYNALDVFVNPTLRSQGLDHTLLEAMQCGKPLLAT 404

Query: 399 RLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATK 458
             +SI  SV+V +D G+ FSP V+S+++A+  + A GR+ + +KG + R     +FTATK
Sbjct: 405 HFSSITWSVVVSSDFGHTFSPNVDSLEQAMEAVIAQGRDTMRRKGELCRDYASLMFTATK 464

Query: 459 MAAAYERLFLCISNDEKNGENNCKYQSP 486
           M AAYERLFLC+ N     E+ C+Y  P
Sbjct: 465 MGAAYERLFLCMKN-----ESYCQYPLP 487

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	488
TAIR|locus:2122920	516	AT4G19460 [Arabidopsis thalian	0.891	0.843	0.467	6.2e-101
TAIR|locus:2153281	505	AT5G59070 [Arabidopsis thalian	0.627	0.605	0.618	3.7e-96
TAIR|locus:2032702	486	AT1G73160 [Arabidopsis thalian	0.840	0.843	0.446	1.9e-90
TIGR_CMR|GSU_1511	373	GSU_1511 "glycosyl transferase	0.334	0.436	0.296	9.9e-09
TIGR_CMR|BA_5012	380	BA_5012 "glycosyl transferase,	0.348	0.447	0.286	2.9e-07
TIGR_CMR|BA_1558	381	BA_1558 "glycosyl transferase,	0.428	0.548	0.259	1.8e-06
UNIPROTKB|Q65CC1	387	kanF "2-deoxystreptamine gluco	0.356	0.449	0.283	1.8e-06
TIGR_CMR|CPS_4999	367	CPS_4999 "glycosyl transferase	0.459	0.610	0.272	2.7e-06
TIGR_CMR|GSU_1976	373	GSU_1976 "glycosyl transferase	0.424	0.554	0.275	1e-05
TAIR|locus:2150059	510	SQD2 "sulfoquinovosyldiacylgly	0.350	0.335	0.306	1.3e-05

TAIR|locus:2122920 AT4G19460 [Arabidopsis thaliana (taxid:3702)]

 Score = 1001 (357.4 bits), Expect = 6.2e-101, P = 6.2e-101
 Identities = 214/458 (46%), Positives = 292/458 (63%)

Query:    33 CHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFP-SNPPLKLLKIALFVKKWPHRSH 91
             C  S    S +   T +     DL     AWN L F  +NPP K LK+A+F +KWP   +
Sbjct:    62 CSSSTAAVSSSSSDTNQPPWSGDLQTAQFAWNRLDFSLTNPPPKTLKLAVFSRKWPTGPN 121

Query:    92 AGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTY---PISS--LY--FHLSKPTAAG 144
              GG+ERHA TL+ ALA+RGH +H+FT S L+ S  T    P+S   +Y   H       G
Sbjct:   122 PGGMERHAFTLYTALARRGHRVHVFT-SPLDQSPETNKIPPVSDQIIYPIIHSHGDAEPG 180

Query:   145 YLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQ 204
                 +  W+  Q +N   +PFD +H+ESV L H  AR + N+ VSWHGIA E++ S I Q
Sbjct:   181 KWRYNKAWELYQEENKK-EPFDAVHSESVALPHWIAREVPNLAVSWHGIALESLQSSIYQ 239

Query:   205 ELLRTPEEPQAYALAERA-----SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEER 259
             +L+R P+EP++             K+++E++FF  YAHH+A SD CG++L+ +Y IPE+R
Sbjct:   240 DLIRKPDEPRSQGFNASLYGAVLPKILDEIRFFHNYAHHIAISDSCGEMLRDVYQIPEKR 299

Query:   260 VHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRS-LVLGMAGRLVKDKGHPLMFEALKQL 318
             VHVILNGVDE  F  D  +   F+ K G+PEN S +VLG AGRLVKDKGHPL+FEA  ++
Sbjct:   300 VHVILNGVDENGFTSDKKLRTLFRSKLGLPENSSAIVLGAAGRLVKDKGHPLLFEAFAKI 359

Query:   319 LAENDTFRRSTVFLV-AGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR 377
             +    T+  S V+LV AG GPW  RY++LG  V +LG L+   L  FYN ID+FVNPTLR
Sbjct:   360 I---QTY--SNVYLVVAGSGPWEQRYKELGEKVSILGSLNPNELKGFYNGIDLFVNPTLR 414

Query:   378 AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGRE 437
              QGLD T++EAMLSGKP+MA+R ASI  +++V  + G++F+P VE++   +    A+G E
Sbjct:   415 PQGLDLTLMEAMLSGKPVMASRYASIKRTIVVNDEFGFMFAPNVEALTAVMEVAVAEGAE 474

Query:   438 VLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEK 475
              L ++G   ++    +FTA+KMA AYERLFLCI ND+K
Sbjct:   475 RLAERGRKCKEYAAEMFTASKMALAYERLFLCI-NDQK 511

GO:0005634 "nucleus" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR|locus:2153281 AT5G59070 [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 196/317 (61%), Positives = 239/317 (75%)

Query:   167 VIHTESVGLRHTRARNLTNVVVSWHG-IAYETIH-SDIIQELLRTPEE----PQAYALAE 220
             ++HT +  LR+  A        ++H  I  E +  +DI        EE    P + AL E
Sbjct:   181 LLHTRAKNLRNVVASWHGIAYETFHSDIIQELLRQADIAAATAAGTEEEQPPPSSPALTE 240

Query:   221 RASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGK 280
             RA +VVEEVKFF +YAHHVATSDHCGDVLKRIYMIPEERVH+ILNGVDE VFKPDV+  +
Sbjct:   241 RAKRVVEEVKFFQRYAHHVATSDHCGDVLKRIYMIPEERVHIILNGVDENVFKPDVSKRE 300

Query:   281 DFKKKFGIPENRS----LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGD 336
              F++KFG+   ++    LVLG+AGRLV+DKGHPLMF ALK++  EN   R + V LVAGD
Sbjct:   301 SFREKFGVRSGKNKKSPLVLGIAGRLVRDKGHPLMFSALKRVFEENKEARENVVVLVAGD 360

Query:   337 GPWGARYRDLG-TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPL 395
             GPWG RY+DLG TNVIVLGPLDQ +LA FYNAID+FVNPTLRAQGLDHT+LEAM+SGKP+
Sbjct:   361 GPWGNRYKDLGSTNVIVLGPLDQEKLAGFYNAIDVFVNPTLRAQGLDHTLLEAMVSGKPV 420

Query:   396 MATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFT 455
             +ATRLASI GSV+VG  +GY FSP VES+ +A+  + +DG E L++KG  AR+R L LFT
Sbjct:   421 LATRLASITGSVVVGPHLGYTFSPNVESLTEAILRVVSDGTEELQRKGKEARERSLRLFT 480

Query:   456 ATKMAAAYERLFLCISN 472
             ATKMA +YER FLCIS+
Sbjct:   481 ATKMADSYERFFLCISD 497

GO:0005886 "plasma membrane" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2032702 AT1G73160 [Arabidopsis thaliana (taxid:3702)]

 Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
 Identities = 193/432 (44%), Positives = 268/432 (62%)

Query:    57 LWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIF 116
             L FP  WN LS    P  + LK+A+F K WP  S  GG+ERHA TL+ +LA RGHE+H+F
Sbjct:    66 LTFP--WNKLSL--GPISEKLKLAVFCKSWPVGSIPGGMERHAYTLYTSLASRGHEIHVF 121

Query:   117 TASCLNCSFPTY-PISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGK-PFDVIHTESVG 174
             T S    +   Y     L+ + + P   G L+ S  ++     NS     FD +HTESV 
Sbjct:   122 TVSSDRSNREEYYNKGDLHVYFA-PNEHGSLNHSRAFEIFHKINSLDHHSFDYVHTESVS 180

Query:   175 LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFF 232
             L H R + + N  + V+WHGI YE +HS++ QEL  + + P +  L +   ++V+E++FF
Sbjct:   181 LPHWRVKMVPNGDIAVTWHGIWYEIMHSNLFQEL--SNDRPSS-DLQQTMPRLVDEIRFF 237

Query:   233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENR 292
             PKY  H+  S+   +VL  IY +P+ +VHVI+NGVD+  F      G  F+ K GIP+N 
Sbjct:   238 PKYKQHICISNSAREVLVNIYQLPKRKVHVIVNGVDQTKFVYSPESGARFRAKHGIPDNG 297

Query:   293 S-LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVI 351
             + +V+G++GRLV+DKGHPL++EA   L+  +         LVAG GPWG RY +LG NV 
Sbjct:   298 TYIVMGVSGRLVRDKGHPLLYEAFALLVKMHP----KVYLLVAGSGPWGKRYAELGENVR 353

Query:   352 VLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGT 411
             VLG L+   L+ FYNA+D+FVNPTLR QGLD T++EAM  GKP++A    SIVG+V+V  
Sbjct:   354 VLGALEPEELSGFYNALDVFVNPTLRPQGLDLTIIEAMQCGKPVVAPNYPSIVGTVVVDE 413

Query:   412 DMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCIS 471
               GY FSP V S+ + L  +  DG  VLE KG+  +   L++FTAT+MA+AYER F+C+ 
Sbjct:   414 RFGYTFSPNVRSLVETLDSVVRDGPRVLEMKGIACKGYALSMFTATQMASAYERFFMCMK 473

Query:   472 NDEKNGENNCKY 483
             N     E  C+Y
Sbjct:   474 N-----ERYCRY 480

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TIGR_CMR|GSU_1511 GSU_1511 "glycosyl transferase, group 1 family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 160 (61.4 bits), Expect = 9.9e-09, P = 9.9e-09
 Identities = 53/179 (29%), Positives = 86/179 (48%)

Query:   239 VATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGM 298
             +  S+H    +KR Y +   +  +I NGVD   FK D ++   F+ + G+P N  L+ G 
Sbjct:   142 IVISEHLLSYIKRSYSVDPGKFIIIRNGVDTTRFKKDSSLKGIFRNELGVPANFPLI-GY 200

Query:   299 AGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW---GARYRD-LGTN--VIV 352
              GR  + K   +  +  K LL +         F +AGDG       +  D LG +  V  
Sbjct:   201 IGRFSRQKRPDVFLDVAKHLLGKLG----EVYFYMAGDGDLLDKSKKLADSLGISNRVSF 256

Query:   353 LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGT 411
             + P D   + +  N+ D+ V  T   +G   T+LEA+ +G P++A+ + +I  S  VGT
Sbjct:   257 VAPRDDIHIVL--NSTDMLVL-TSSYEGAPLTILEALATGVPVVASDVGAI--SEYVGT 310

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TIGR_CMR|BA_5012 BA_5012 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 53/185 (28%), Positives = 84/185 (45%)

Query:   266 GVDEEVFKPDVAMGKD-FKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDT 324
             GVD  +F P  A   + F+KK+ I      VL   GR+  +K      + L+ L+ ++  
Sbjct:   174 GVDCNLFHP--AYNTEIFRKKYNI--TAKYVLSYVGRITPEKD----IDTLQNLIVKSAH 225

Query:   325 FRRSTVFLVAGDGPWGARYRDL--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLD 382
              R    +L+AGDGP     R+    TNV   G L    LA  Y   ++ V P+   +   
Sbjct:   226 TRNDIHWLIAGDGPLATSLREAVPKTNVTFTGYLQGVDLAEAYACSNMMVFPSA-TETFG 284

Query:   383 HTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESV-KKALYGIWADGREVLEK 441
             + VLE++  G P++       V ++I     G L  P+ E V   ++Y +     E LE+
Sbjct:   285 NVVLESLACGTPVIGANSGG-VKNIITDGKTGVLCPPKNEDVFLSSIYSL-LQNEEKLEQ 342

Query:   442 KGLVA 446
              G+ A
Sbjct:   343 MGIAA 347

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TIGR_CMR|BA_1558 BA_1558 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 60/231 (25%), Positives = 101/231 (43%)

Query:   256 PEERVHVILNGVDEEV-FKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEA 314
             P + +  + N +DE V FK D+      KK++GI E+  +++ ++    K K    + +A
Sbjct:   164 PNKDIQTVYNFIDERVYFKRDMTQ---LKKEYGISESEKILIHISN-FRKVKRVQDVVQA 219

Query:   315 LKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTN------VIVLGPLDQTRLAMFYNAI 368
               +++ E D        L+ GDGP       L  N      V+ LG  D     +  + +
Sbjct:   220 FAKIVTEVDA-----KLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL 274

Query:   369 DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKA 427
              + ++    + GL   +LEAM  G P + TR+  I   VI   D GYL        V   
Sbjct:   275 MLLLSEK-ESFGL--VLLEAMACGVPCIGTRVGGIP-EVIQHGDTGYLCEVGDTTGVADQ 330

Query:   428 LYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGE 478
                +  D  E+    G  AR+     F + K+ + YE ++  +  D+KNG+
Sbjct:   331 AIQLLKD-EELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDDKNGK 380

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|Q65CC1 kanF "2-deoxystreptamine glucosyltransferase" [Streptomyces kanamyceticus (taxid:1967)]

 Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 53/187 (28%), Positives = 89/187 (47%)

Query:   260 VHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLL 319
             + V+ + VD +  +   A  +  KK+FG+P+    V+G  GR+  +KG     +A+ +L 
Sbjct:   172 IDVVPDAVDPDRAEAAPAEVERLKKRFGLPQEGGPVIGFVGRIAHEKGWRHAVQAVAELA 231

Query:   320 AENDTFRRSTVFLVAGDGP----WGARYRDLG-TNVIVL-GPLDQTRLAMFYNAIDIFVN 373
                D  R  T FLV GDGP      A   + G T+  V  G L    +     A+D+ + 
Sbjct:   232 ---DAGRDFT-FLVVGDGPQRADMEAAVAEAGLTDRFVFTGFLPNDEIPAVMTALDVLLM 287

Query:   374 PTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIW 432
             P++  + L  + +EAML+G P+ A  +  +  +V   T    L +P QV  + + +  + 
Sbjct:   288 PSVHEE-LGGSAVEAMLAGTPVAAYGVGGLCDTVGKVTP-SLLAAPGQVAELARTVKRVL 345

Query:   433 ADGREVL 439
              D   VL
Sbjct:   346 DDPAPVL 352

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IDA

GO:1901133 "kanamycin biosynthetic process" evidence=IDA

TIGR_CMR|CPS_4999 CPS_4999 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 68/250 (27%), Positives = 110/250 (44%)

Query:   229 VKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNG-VDEEVFKPDVAMGKDFKKKFG 287
             +K F   +H VA S     +L     +P  + HV+  G V E+  KP V      +   G
Sbjct:   128 IKLFA--SHFVAVSHDRLSLLTNNLKLPLNKCHVVHGGSVIEK--KPTVTSINKARADLG 183

Query:   288 IPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYR--- 344
             IP ++ ++L + G L + KGH     AL +      T     ++ +AGDG    + +   
Sbjct:   184 IPLDQLMLLSI-GHLGEIKGHQDTLVALSKF---TKTMPALHLY-IAGDGAAQEKQKLTE 238

Query:   345 -----DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSGKPLMAT 398
                   +  NV  LG ++      +  A DIF+ P++  A GL    +EA    KP++AT
Sbjct:   239 LVNKLQINENVTFLGQINNA--FSWLEACDIFIQPSVEEAFGL--VFVEAGAKAKPVIAT 294

Query:   399 RLASIVGSVIVGTDMGYLFSPQV-ESVKKALYGIWADGREVLEKKGLVARKRGLNLFTAT 457
              +  I   +IV  + G L  P   ++V+ AL  I  +   + ++ G    KR    F+ T
Sbjct:   295 TVGGIK-EIIVSKETGLLVLPSSPKAVEHAL-AILINSPPLRQQYGENGYKRITEHFSLT 352

Query:   458 KMAAAYERLF 467
              M   Y  +F
Sbjct:   353 NMVNKYTDIF 362

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TIGR_CMR|GSU_1976 GSU_1976 "glycosyl transferase, group 1 family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 63/229 (27%), Positives = 104/229 (45%)

Query:   247 DVLKRIYMIPEERVHVILNGVD--EEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVK 304
             D ++R   +P   +HV+ NG+    E  +P V +     + F       + LG  GRL  
Sbjct:   149 DAMRRKIDLPG--IHVVPNGIPLAGEAERPAVPLDPRIVE-FC---RGGITLGAIGRLSP 202

Query:   305 DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGP---LDQTRL 361
             +KG  ++ +A++++   N   R + +          A+ R+LG    VL P    D  R 
Sbjct:   203 EKGFDILLDAVREVAETNPGVRLALLGEGVERDALEAKIRELGLTERVLLPGYVPDANRY 262

Query:   362 AMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQ- 420
                + A   FV  +L  +GL   +LEAML+G P++ATR+   V  V+ G   G L  P+ 
Sbjct:   263 LPLFRA---FVLSSL-TEGLPMVILEAMLAGVPIVATRVGG-VPEVLDGGAAGLLAEPRH 317

Query:   421 VESVKKALYGIWADGREVLEKKGLVARKRGL--NLFTATKMAAAYERLF 467
               S+   +  +  D  ++L  + L  R R L    + A  MA  Y  ++
Sbjct:   318 AGSLAGCVSRLIGD--DLLAAR-LAERGRHLVETRYAAGAMAIKYSEIY 363

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2150059 SQD2 "sulfoquinovosyldiacylglycerol 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 58/189 (30%), Positives = 87/189 (46%)

Query:   266 GVDEEVFKPDV-AMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDT 324
             GVD E F P   +     +   G PE + LV+ + GR+  +K      E LK ++   D 
Sbjct:   282 GVDSESFNPRFRSQEMRIRLSNGEPE-KPLVIHV-GRIGVEKS----LELLKSVM---DK 332

Query:   325 FRRSTVFLVAGDGPWGARYRDLGTNV--IVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLD 382
                + +  + GDGP+      L T +  +  G L    L+  Y + D+FV P+  ++ L 
Sbjct:   333 LPEARIAFI-GDGPYKEDLEKLFTGMPAVFTGTLQGDELSQAYASGDVFVMPS-ESETLG 390

Query:   383 HTVLEAMLSGKPLMATRLASIVGSVIVGTD--MGYLFSP-QVESVKKALYGIWADGREVL 439
               VLEAM SG P++A R   I   +    +   G+LF+P  VE     L  +  D RE  
Sbjct:   391 LVVLEAMSSGLPVVAARAGGIPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTLLHD-RETR 449

Query:   440 EKKGLVARK 448
             E  G  AR+
Sbjct:   450 EIIGKAARE 458

GO:0005886 "plasma membrane" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0008194 "UDP-glycosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA;IMP

GO:0046506 "sulfolipid biosynthetic process" evidence=TAS

GO:0046510 "UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	488
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	7e-57
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	2e-39
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	1e-32
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	1e-27
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	6e-27
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	2e-26
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	2e-25
cd03795	357	cd03795, GT1_like_4, This family is most closely r	7e-24
cd03814	364	cd03814, GT1_like_2, This family is most closely r	1e-22
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	2e-22
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	2e-22
cd03825	365	cd03825, GT1_wcfI_like, This family is most closel	6e-22
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	7e-21
cd03819	355	cd03819, GT1_WavL_like, This family is most closel	5e-19
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	2e-18
cd03821	375	cd03821, GT1_Bme6_like, This family is most closel	4e-18
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	1e-17
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	5e-17
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	1e-16
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	5e-16
cd03823	359	cd03823, GT1_ExpE7_like, This family is most close	2e-14
TIGR04157	406	TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG	6e-14
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	1e-12
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	1e-12
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	2e-12
TIGR02149	388	TIGR02149, glgA_Coryne, glycogen synthase, Coryneb	4e-12
cd03812	358	cd03812, GT1_CapH_like, This family is most closel	1e-11
pfam13439	171	pfam13439, Glyco_transf_4, Glycosyltransferase Fam	6e-11
cd04955	363	cd04955, GT1_like_6, This family is most closely r	2e-10
TIGR04063	397	TIGR04063, stp3, PEP-CTERM/exosortase A-associated	2e-09
PRK15484	380	PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety	3e-09
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	4e-09
PLN02871	465	PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu	2e-08
cd03813	475	cd03813, GT1_like_3, This family is most closely r	7e-08
TIGR03449	405	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate	3e-07
cd03791	476	cd03791, GT1_Glycogen_synthase_DULL1_like, This fa	5e-07
cd04962	371	cd04962, GT1_like_5, This family is most closely r	8e-07
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	1e-06
pfam13579	158	pfam13579, Glyco_trans_4_4, Glycosyl transferase 4	2e-06
TIGR02095	473	TIGR02095, glgA, glycogen/starch synthase, ADP-glu	5e-06
cd03822	366	cd03822, GT1_ecORF704_like, This family is most cl	8e-06
PRK15427	406	PRK15427, PRK15427, colanic acid biosynthesis glyc	1e-05
cd03796	398	cd03796, GT1_PIG-A_like, This family is most close	2e-05
PRK14099	485	PRK14099, PRK14099, glycogen synthase; Provisional	2e-05
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	3e-05
PRK15179	694	PRK15179, PRK15179, Vi polysaccharide biosynthesis	6e-05
PRK00654	466	PRK00654, glgA, glycogen synthase; Provisional	7e-05
COG0297	487	COG0297, GlgA, Glycogen synthase [Carbohydrate tra	8e-05
TIGR04047	373	TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M	2e-04
TIGR04005	406	TIGR04005, wcaL, colanic acid biosynthesis glycosy	0.002

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score =  192 bits (491), Expect = 7e-57
 Identities = 107/402 (26%), Positives = 166/402 (41%), Gaps = 41/402 (10%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHL 137
           KI L   ++P     GG ERH L L  ALA RGHE+ + T               +    
Sbjct: 1   KILLVTPEYPP--SVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRP 58

Query: 138 SKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHT---ESVGLRHTRARNL-TNVVVSWHGI 193
                   L   ++      +    + FDV+H     ++      AR L   +V++ HG+
Sbjct: 59  PPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGL 118

Query: 194 AYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIY 253
            +                 P              E +   +    +A S+   + L+ + 
Sbjct: 119 EFG---------------RPGNELGLLLKLARALERRALRRADRIIAVSEATREELRELG 163

Query: 254 MIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFE 313
            +P E++ VI NGVD E F+P        +++ GIPE+   V+   GRLV  KG  L+ E
Sbjct: 164 GVPPEKITVIPNGVDTERFRPAPR---AARRRLGIPEDE-PVILFVGRLVPRKGVDLLLE 219

Query: 314 ALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNA 367
           AL +L  E          ++ GDGP             LG  V  LG +    L   Y A
Sbjct: 220 ALAKLRKE----YPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAA 275

Query: 368 IDIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVK 425
            D+FV P+L    GL   +LEAM +G P++A+ +  I   V  G   G L  P   E++ 
Sbjct: 276 ADVFVLPSLYEGFGL--VLLEAMAAGLPVVASDVGGIPEVVEDGET-GLLVPPGDPEALA 332

Query: 426 KALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
           +A+  +  D  E+  + G  AR+R    F+  ++AA  E ++
Sbjct: 333 EAILRLLDD-PELRRRLGEAARERVAERFSWDRVAARTEEVY 373

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  146 bits (370), Expect = 2e-39
 Identities = 103/408 (25%), Positives = 152/408 (37%), Gaps = 56/408 (13%)

Query: 81  LFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKP 140
           L +       + GG       L  ALAKRG E+ +                 L      P
Sbjct: 2   LVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLP 61

Query: 141 TA-------AGYLDQSIVWQQL-QTQNSTGKPFDVIHTES------VGLRHTRARNLTNV 186
                     G L   +  + L +         D+IH               R   +  +
Sbjct: 62  VLLPVVPLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGI-PL 120

Query: 187 VVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCG 246
           VV+ HG       SD+     +            RA  V+             A S+   
Sbjct: 121 VVTLHG-------SDVNLLPRKRLLRALLRRALRRADAVI-------------AVSEALA 160

Query: 247 DVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK 306
           D LK    I  E+V VI NGVD E F P     +   +K G+PE++  V+   GRLV  K
Sbjct: 161 DELKA-LGIDPEKVTVIPNGVDTERFSPA---DRAEARKLGLPEDK-KVILFVGRLVPRK 215

Query: 307 GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTR 360
           G   + EAL +LL +          ++ GDGP             L   V  LG +    
Sbjct: 216 GIDYLIEALARLLKKRPDVH----LVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEE 271

Query: 361 LAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQ 420
           +  +Y A D+FV P+LR +G    +LEAM  G P++AT +  I   +I   + G L  P 
Sbjct: 272 VPAYYAAADVFVLPSLR-EGFGLVLLEAMACGLPVVATDVGGI-PEIITDGENGLLVPPG 329

Query: 421 -VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
             E++ +A+  + AD      + G  AR+R    F+   +A     L+
Sbjct: 330 DPEALAEAILRLLADP---WLRLGRAARRRVAERFSWENVAERLLELY 374

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  127 bits (321), Expect = 1e-32
 Identities = 104/399 (26%), Positives = 159/399 (39%), Gaps = 66/399 (16%)

Query: 91  HAGGLERHALTLHLALAKRGHELHI---FTASCLNCSFPTYPISSLYFHLSKPTAAGYLD 147
             GG ER  + L   L +   E  +        L        +    + L K    G  D
Sbjct: 10  DVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVP--VYCLGKRP--GRPD 65

Query: 148 QSIVWQ--QLQTQNSTGKPFDVIHTESVGLRHTR-----ARNLTNVVVSWHGIAYETIHS 200
              + +  +L  +    +P DV+HT    + H       A  L  V     GI     HS
Sbjct: 66  PGALLRLYKLIRRL---RP-DVVHTW---MYHADLYGGLAARLAGVPPVIWGI----RHS 114

Query: 201 DIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERV 260
           D+      T        L    S  +            VA S    +  + I   P +++
Sbjct: 115 DLDLGKKSTR---LVARLRRLLSSFI---------PLIVANSAAAAEYHQAIG-YPPKKI 161

Query: 261 HVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLA 320
            VI NGVD E F PD+      +++ G+PE+   ++G+  RL   K H  +  A   LL 
Sbjct: 162 VVIPNGVDTERFSPDLDARARLREELGLPEDT-FLIGIVARLHPQKDHATLLRAAALLLK 220

Query: 321 ENDTFRRSTVFLVAGDGPWGARYR---------DLGTNVIVLGPLDQTRLAMFYNAIDIF 371
           +    R     L+ GDGP   R            L   VI+LG   ++ +    NA+D+F
Sbjct: 221 KFPNAR----LLLVGDGP--DRANLELLALKELGLEDKVILLGE--RSDVPALLNALDVF 272

Query: 372 VNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSV--IVGTDMGYLFSP-QVESVKKAL 428
           V  +  ++G  + +LEAM  G P++AT     VG    +VG D G+L  P   E++ +A+
Sbjct: 273 VLSS-LSEGFPNVLLEAMACGLPVVATD----VGDNAELVG-DTGFLVPPGDPEALAEAI 326

Query: 429 YGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
             + AD     +  G  AR+R    F+   M  AYE L+
Sbjct: 327 EALLADPALR-QALGEAARERIEENFSIEAMVEAYEELY 364

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  113 bits (284), Expect = 1e-27
 Identities = 97/426 (22%), Positives = 150/426 (35%), Gaps = 105/426 (24%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTAS--------CLNCSFPTYP 129
           KI   V      +  GGL    L L  AL   G+E+H+             L       P
Sbjct: 1   KILHIV------TVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIP 54

Query: 130 ISS----------LYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHT- 178
           +                L +      L +              +P D++HT      HT 
Sbjct: 55  LDRRGINPFKDLKALLRLYR-----LLRK-------------ERP-DIVHT------HTP 89

Query: 179 ----------RARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEE 228
                     R   +  V+ + HG+ +      + + L           LA R +  V  
Sbjct: 90  KPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLL-----LERLALRFTDKV-- 142

Query: 229 VKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVIL-NGVDEEVFKPDVAMGKDFKKKFG 287
              F          D   D+  ++ +I +++  +I  +GVD + F P             
Sbjct: 143 --IF------QNEDDR--DLALKLGIIKKKKTVLIPGSGVDLDRFSP---------SPEP 183

Query: 288 IPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-- 345
           IPE+   V     RL+KDKG   + EA + L A+    R     L+ GDG          
Sbjct: 184 IPEDD-PVFLFVARLLKDKGIDELLEAARILKAKGPNVR----LLLVGDGDEENPAAILE 238

Query: 346 -----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRL 400
                L   V  LG  D         A D+FV P+ R +GL   +LEAM  G+P++AT +
Sbjct: 239 IEKLGLEGRVEFLGFRDDVP--ELLAAADVFVLPSYR-EGLPRVLLEAMAMGRPVIATDV 295

Query: 401 ASIVGSVIVGTDMGYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKM 459
                +VI G + G+L  P   E++  A+  +  +  E+  + G  ARKR    F    +
Sbjct: 296 PGCREAVIDGVN-GFLVPPGDAEALADAIERL-IEDPELRARMGQAARKRAEEEFDEEIV 353

Query: 460 AAAYER 465
                 
Sbjct: 354 VKKLLE 359

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  111 bits (280), Expect = 6e-27
 Identities = 99/385 (25%), Positives = 156/385 (40%), Gaps = 51/385 (13%)

Query: 101 TLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAG--YLDQSIVW--QQLQ 156
            L   L KRGHE+++        S+P  P       +         Y D  +     +  
Sbjct: 22  RLAEELEKRGHEVYVVA-----PSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRAL 76

Query: 157 TQNSTGKPFDVIHTES------VGLRHTRARNLTNVVVSWHGIAYETI-HSDIIQELLRT 209
                    D++HT +      +GLR  R   +  VV ++H   YE   H   +  LL  
Sbjct: 77  IIILKELGPDIVHTHTPFSLGLLGLRVARKLGIP-VVATYH-TMYEDYTHYVPLGRLLA- 133

Query: 210 PEEPQAYALAERASKVVEEVKFFPKYAHHV-ATSDHCGDVLKRIYMIPEERVHVILNGVD 268
                      RA    +  + F      V A S+   D+L+  Y + +  + VI  G+D
Sbjct: 134 -----------RAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE-YGV-KRPIEVIPTGID 180

Query: 269 EEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRS 328
            + F+P    G D ++K GIPE+   VL   GRL K+K    +  A  +LL E    +  
Sbjct: 181 LDRFEPVD--GDDERRKLGIPEDE-PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVK-- 235

Query: 329 TVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNP-TLRAQGL 381
              ++ GDGP      +      L   VI  G + +  L  +Y A D+FV   T   QGL
Sbjct: 236 --LVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGL 293

Query: 382 DHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEK 441
              +LEAM +G P++A   A  +  ++   + G+LF P  E++ +AL        E+  +
Sbjct: 294 --VLLEAMAAGLPVVAVD-APGLPDLVADGENGFLFPPGDEALAEAL-LRLLQDPELRRR 349

Query: 442 KGLVARKRGLNLFTATKMAAAYERL 466
               A +       A K+   YE +
Sbjct: 350 LSKNAEESAEKFSFAKKVEKLYEEV 374

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score =  110 bits (275), Expect = 2e-26
 Identities = 96/408 (23%), Positives = 157/408 (38%), Gaps = 39/408 (9%)

Query: 78  KIALFVKKWPHRSHAGGLERHA--LTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYF 135
           KI + +   P     GG+ER+   L   L L  RGHE+ +                 +  
Sbjct: 2   KILILIIYPPP--RVGGIERYVLELAKALRLLGRGHEVLVIAPE-----KLEGLGIEVLR 54

Query: 136 HLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAY 195
             S       +       +L        P+D+IH  S+ L          ++        
Sbjct: 55  LPSVSLPLLIVRLRPALLRLLLLLKRLLPYDIIHAHSL-LLAPGGLLALLLLKLLGIPLV 113

Query: 196 ETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMI 255
            T+H  I + LL          L     ++ +           +A S    ++L+ +   
Sbjct: 114 VTLHGLIPRILLLPRLLLLLGLLRLLLKRLKK--ALRLLADRVIAVSPALKELLEALG-- 169

Query: 256 PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEAL 315
              ++ VI NG+D E F P         +   +PE    V+   GRL  +KG  L+ EA 
Sbjct: 170 VPNKIVVIPNGIDTEKFAP--------ARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAA 221

Query: 316 KQLLAENDTFRRSTVFLVAGDGPWG-------ARYRDLGTNVIVLGPLDQTRLAMFYNAI 368
            +L       +     ++ GDGP         A+   L  NV  LG +    LA    + 
Sbjct: 222 AKLKKRGPDIK----LVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASA 277

Query: 369 DIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQ-VESVKK 426
           D+FV P+L    GL   +LEAM +G P++A+ +  I   V+   + G L  P  VE +  
Sbjct: 278 DVFVLPSLSEGFGL--VLLEAMAAGTPVIASDVGGIP-EVVEDGETGLLVPPGDVEELAD 334

Query: 427 ALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDE 474
           AL  +  D  E+ E+ G  AR+R    F+  ++A     L+  +  ++
Sbjct: 335 ALEQLLED-PELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381

Length = 381

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  106 bits (267), Expect = 2e-25
 Identities = 71/338 (21%), Positives = 114/338 (33%), Gaps = 60/338 (17%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHL 137
           KI   +         GG ER  L L   L KRG+++ +             P +     +
Sbjct: 1   KILFVI----PSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPV 56

Query: 138 SKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHT------RARNLTNVVVSWH 191
                    D   + +  +      +  DV+   S             AR  T ++V   
Sbjct: 57  RVLKLKSLRDLLAILRLRRLLRK--EKPDVVI--SHLTTTPNVLALLAARLGTKLIV--- 109

Query: 192 GIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKR 251
                  H+ +  EL R            +   ++   K + +    VA S+   + L +
Sbjct: 110 -----WEHNSLSLELKR------------KLRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152

Query: 252 IYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM 311
           +  IP +++ VI N +D E  +       +       P     V+   GRL   KG   +
Sbjct: 153 LLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPPDGP-----VILAVGRLSPQKGFDTL 207

Query: 312 FEALKQLLAENDTFRRSTVFLVAGDGPWGARYR------DLGTNVIVLG----PLDQTRL 361
             A   L  E    R     ++ GDGP             L   V  LG    P      
Sbjct: 208 IRAFALLRKEGPDAR----LVILGDGPLREELEALAKELGLADRVHFLGFQSNPYP---- 259

Query: 362 AMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATR 399
             +  A D+FV  + R +G  + +LEAM  G P++AT 
Sbjct: 260 --YLKAADLFVLSS-RYEGFPNVLLEAMALGTPVVATD 294

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  102 bits (256), Expect = 7e-24
 Identities = 105/395 (26%), Positives = 152/395 (38%), Gaps = 67/395 (16%)

Query: 86  WPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAG- 144
            P R   GG+E+    L   LA RG E+ +    C +              + +  +   
Sbjct: 10  PPDR---GGIEQVIRDLAEGLAARGIEVAVL---CASPEPKGRDEERNGHRVIRAPSLLN 63

Query: 145 --YLDQSI-VWQQLQTQNSTGKPFDVIHTE----SVGLRHTRARNLTNVVVSWHGIAYET 197
                 S   ++QL+      K  DVIH         L          VVV WH      
Sbjct: 64  VASTPFSPSFFKQLKKLA---KKADVIHLHFPNPLADLALLLLPRKKPVVVHWH------ 114

Query: 198 IHSDII-QELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIP 256
             SDI+ Q+LL     P       RA  +V      P YA    TS     VL+R     
Sbjct: 115 --SDIVKQKLLLKLYRPLQRRFLRRADAIVATS---PNYAE---TSP----VLRRF---- 158

Query: 257 EERVHVILNGVDEEVF-KPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEAL 315
            ++V VI  G+D   + +PD      +++  G P      L   GRLV  KG  ++ EA 
Sbjct: 159 RDKVRVIPLGLDPARYPRPDALEEAIWRRAAGRP----FFL-FVGRLVYYKGLDVLLEAA 213

Query: 316 KQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAID 369
             L             ++ G+GP  A          L   V  LG LD    A    A D
Sbjct: 214 AAL----PDAP----LVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACD 265

Query: 370 IFVNP-TLR--AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQ-VESVK 425
           +FV P   R  A G+   +LEAM  GKP+++T + +    V +    G +  P    ++ 
Sbjct: 266 VFVFPSVERSEAFGI--VLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALA 323

Query: 426 KALYGIWADGREVLEKKGLVARKRGLNLFTATKMA 460
           +A+  +  D  E+ E+ G  AR+R    FTA +M 
Sbjct: 324 EAIRRLLED-PELRERLGEAARERAEEEFTADRMV 357

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357

>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 98.8 bits (247), Expect = 1e-22
 Identities = 90/394 (22%), Positives = 133/394 (33%), Gaps = 70/394 (17%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFT--------ASCLNCSFPTYP 129
           +IA+    +  +    G+ R    L   L  RGHE+ +                  P+ P
Sbjct: 1   RIAIVTDTFLPQV--NGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVP 58

Query: 130 I---SSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIH--TESV----GLRHTRA 180
           +     +   L             V + L          DV+H  T        LR  R 
Sbjct: 59  LPGYPEIRLALPPRRR--------VRRLLDAFA-----PDVVHIATPGPLGLAALRAARR 105

Query: 181 RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHV- 239
             +  VV S+H     T   + ++     P    A+A           +++F   A  V 
Sbjct: 106 LGIP-VVTSYH-----TDFPEYLRYYGLGPLSWLAWAY----------LRWFHNRADRVL 149

Query: 240 ATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMA 299
             S     +   +      RV +   GVD E+F P     +  + + G P+    VL   
Sbjct: 150 VPS---PSLADELRARGFRRVRLWPRGVDTELFHPRRR-DEALRARLGPPDRP--VLLYV 203

Query: 300 GRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQT 359
           GRL  +K    + +A   L             ++ GDGP  AR      NV  LG LD  
Sbjct: 204 GRLAPEKNLEALLDADLPLRRRPPV-----RLVIVGDGPARARLEARYPNVHFLGFLDGE 258

Query: 360 RLAMFYNAIDIFVNP----TLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGY 415
            LA  Y + D+FV P    T    GL   VLEAM SG P++A         ++   + G 
Sbjct: 259 ELAAAYASADVFVFPSRTETF---GL--VVLEAMASGLPVVAPDAGG-PADIVTDGENGL 312

Query: 416 LFSPQVESVKKALYGIWADGREVLEKKGLVARKR 449
           L  P       A         E+  +    AR  
Sbjct: 313 LVEPGDAEAFAAALAALLADPELRRRMAARARAE 346

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score = 98.0 bits (245), Expect = 2e-22
 Identities = 97/410 (23%), Positives = 142/410 (34%), Gaps = 83/410 (20%)

Query: 78  KIALFVKKWPHRSHA------GGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPIS 131
           KIA  VK++P  S          LE     + +   +   +  +        +   Y   
Sbjct: 1   KIAYLVKEFPRLSETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELARTRYLAR 60

Query: 132 SLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTE--SVGLRHTR-ARNLTNV-- 186
           SL            L Q++V  +   +       D IH    +        A  L  +  
Sbjct: 61  SLA----------LLAQALVLARELRR----LGIDHIHAHFGTTPATVAMLASRLGGIPY 106

Query: 187 VVSWHGIAYETIHSDIIQELLRTPEEPQAYALAE---RASKVVEEVKFFPKYAHHVATSD 243
             + HG        DI          P A  L E   RA  VV             A S+
Sbjct: 107 SFTAHGK-------DIF-------RSPDAIDLDEKLARADFVV-------------AISE 139

Query: 244 HCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV 303
           +    L R+     +++HV+  GVD E F P          +   P    L +   GRLV
Sbjct: 140 YNRQQLIRLLGCDPDKIHVVHCGVDLERFPP----------RPPPPPGEPLRILSVGRLV 189

Query: 304 KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYR------DLGTNVIVLGPLD 357
           + KG   + EAL  L      FR      + GDGP             L   V +LG   
Sbjct: 190 EKKGLDYLLEALALLKDRGIDFR----LDIVGDGPLRDELEALIAELGLEDRVTLLGAKS 245

Query: 358 QTRLAMFYNAIDIFVNPTLRAQGLDH-----TVLEAMLSGKPLMATRLASIVGSVIVGTD 412
           Q  +     A D+FV P++ A   D       ++EAM  G P+++T ++ I   V  G  
Sbjct: 246 QEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGET 305

Query: 413 MGYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAA 461
            G L  P   E++  A+  +  D  E+  + G   R R    F   K AA
Sbjct: 306 -GLLVPPGDPEALADAIERL-LDDPELRREMGEAGRARVEEEFDIRKQAA 353

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 98.3 bits (245), Expect = 2e-22
 Identities = 71/241 (29%), Positives = 103/241 (42%), Gaps = 11/241 (4%)

Query: 233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP-DVAMGKDFKKKFGIPEN 291
           P   H+VA S    D L+    +P  ++H I NGVD E F P            F   E 
Sbjct: 135 PLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADE- 193

Query: 292 RSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGAR----YRDLG 347
            S+V+G  GRL   K  P +  A   L+ +          ++ GDGP         R  G
Sbjct: 194 -SVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAG 252

Query: 348 TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSV 407
              +V  P ++  +     A+D+FV P+L A+G+ +T+LEAM SG P++AT +      V
Sbjct: 253 LAHLVWLPGERDDVPALMQALDLFVLPSL-AEGISNTILEAMASGLPVIATAVGGNPELV 311

Query: 408 IVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERL 466
             G   G L  P    ++ +AL   +          G   R R    F+   M AAY  L
Sbjct: 312 QHGVT-GALVPPGDAVALARAL-QPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGL 369

Query: 467 F 467
           +
Sbjct: 370 Y 370

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 96.9 bits (242), Expect = 6e-22
 Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 26/239 (10%)

Query: 239 VATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDF-KKKFGIPENRSLVL- 296
           VA S    D  +   +     + VI NG+D  +F+P     K   +K+ G+P ++ ++L 
Sbjct: 140 VAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRP---RDKREARKRLGLPADKKIILF 196

Query: 297 GMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPL 356
           G  G     KG   + EALK+L           + +     P      DL   V  LG L
Sbjct: 197 GAVGGTDPRKGFDELIEALKRL--AERWKDDIELVVFGASDP--EIPPDLPFPVHYLGSL 252

Query: 357 -DQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDM-- 413
            D   LA+ Y+A D+FV P+L  +   +T +EA+  G P++A      VG +    D+  
Sbjct: 253 NDDESLALIYSAADVFVVPSL-QENFPNTAIEALACGTPVVAFD----VGGI---PDIVD 304

Query: 414 ----GYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
               GYL  P   E + + +  + AD  +  E+ G  AR+   N F +   A  Y  L+
Sbjct: 305 HGVTGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARELAENEFDSRVQAKRYLSLY 362

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 93.6 bits (233), Expect = 7e-21
 Identities = 88/392 (22%), Positives = 139/392 (35%), Gaps = 54/392 (13%)

Query: 88  HRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLD 147
                 G+ R+A  L  AL K   E  +             P+ +    L +        
Sbjct: 10  ASRRPTGIGRYARELLRALLKLDPE-EVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWG 68

Query: 148 QSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELL 207
              + +            D++H+        R R +  VV         TIH D+I   L
Sbjct: 69  LLFLLRAGDRLLLLLLGLDLLHSPHNTAPLLRLRGVPVVV---------TIH-DLIP--L 116

Query: 208 RTPEE-PQAYALAERASKVVEEVKFFP---KYAHHVAT-SDHCGDVLKRIYMIPEERVHV 262
           R PE     +    R        +      + A  + T S+     L R   +P +++ V
Sbjct: 117 RFPEYFSPGFRRYFR--------RLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVV 168

Query: 263 ILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLG-MAGRLVKDKGHPLMFEALKQLLAE 321
           I  GVD   F+P  A  +  +  + +P    L +G +  R    K    + EA  +L A+
Sbjct: 169 IPLGVDPR-FRPPPAEAEVLRALYLLPRPYFLYVGTIEPR----KNLERLLEAFARLPAK 223

Query: 322 NDTFRRSTVFLVAGDGPWGARYR-------DLGTNVIVLGPLDQTRLAMFYNAIDIFVNP 374
               +     ++ G   W             LG  V  LG +    LA  Y     FV P
Sbjct: 224 GPDPK----LVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFP 279

Query: 375 TLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQ-VESVKKALYGIWA 433
           +L  +G    VLEAM  G P++A+ ++S+     V  D    F P   E++  A+  +  
Sbjct: 280 SL-YEGFGLPVLEAMACGTPVIASNISSL---PEVAGDAALYFDPLDPEALAAAIERLLE 335

Query: 434 DG--REVLEKKGLVARKRGLNLFTATKMAAAY 463
           D   RE L ++GL         F+  K A   
Sbjct: 336 DPALREELRERGL----ARAKRFSWEKTARRT 363

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 88.1 bits (219), Expect = 5e-19
 Identities = 56/232 (24%), Positives = 95/232 (40%), Gaps = 16/232 (6%)

Query: 239 VATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPD---VAMGKDFKKKFGIPENRSLV 295
           +A S+   D ++  Y +  +R+ VI  GVD + F P            +++ +P+ +  V
Sbjct: 129 IAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGK-PV 187

Query: 296 LGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGP 355
           + + GRL + KG  +  EAL +L           + +V         Y +L   +  LG 
Sbjct: 188 ILLPGRLTRWKGQEVFIEALARL---KKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGL 244

Query: 356 LDQTRLA-----M--FYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVI 408
            D+         M   Y   DI V+ +   +    T +EA   G+P++A+       +V 
Sbjct: 245 QDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVR 304

Query: 409 VGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKM 459
            G   G L  P   E++ +AL  I +   E   K    AR     LF+  +M
Sbjct: 305 PGET-GLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM 355

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 86.8 bits (216), Expect = 2e-18
 Identities = 95/415 (22%), Positives = 151/415 (36%), Gaps = 77/415 (18%)

Query: 92  AGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLY--FH--------LSKPT 141
            GG   + L L  ALA+ GHE+ IFT    +   P   ++               L K  
Sbjct: 20  TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEE 79

Query: 142 AAGYLDQSIVW--QQLQTQNSTGKPFDVIHT---ES--VGLRHTRARNLTNV--VVSWHG 192
              YLD+      + L+ +   G   D+IH    +S  V L          +  V ++H 
Sbjct: 80  LWPYLDEFADDLLRFLRRE---GGRPDLIHAHYWDSGLVALL---LARRLGIPLVHTFHS 133

Query: 193 I---------AYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSD 243
           +         A +T          R   E +   L   A +V+             A++ 
Sbjct: 134 LGAVKRRHLGAADTYEPAR-----RIEAEER---LLRAADRVI-------------ASTP 172

Query: 244 HCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV 303
              + L  +Y     R+ V+  GVD E F P     +  + +     ++  +L + GRL 
Sbjct: 173 QEAEELYSLYGAYPRRIRVVPPGVDLERFTPY-GRAEARRARLLRDPDKPRILAV-GRLD 230

Query: 304 KDKGHPLMFEALKQLLAENDTFRRSTVFLVAG------DGPWGARY---RDLGT--NVIV 352
             KG   +  A  +L    +      + +V G                 R+LG    V  
Sbjct: 231 PRKGIDTLIRAYAELPELRERAN---LVIVGGPRDDILAMDEEELRELARELGVIDRVDF 287

Query: 353 LGPLDQTRLAMFYNAIDIFVNPTL-RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGT 411
            G + +  L   Y A D+FVNP L    GL  T LEAM  G P++AT +      V+ G 
Sbjct: 288 PGRVSREDLPALYRAADVFVNPALYEPFGL--TALEAMACGLPVVATAVGGPRDIVVDGV 345

Query: 412 DMGYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYER 465
             G L  P+  E++  AL  +  D   +  +      +R    +T  ++AA    
Sbjct: 346 T-GLLVDPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYTWERVAARLLE 398

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 85.8 bits (213), Expect = 4e-18
 Identities = 89/399 (22%), Positives = 144/399 (36%), Gaps = 63/399 (15%)

Query: 92  AGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSL-----YFHLSKPTAAGYL 146
            GG  R  L L  ALAK GHE+ + T                              A YL
Sbjct: 13  YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYL 72

Query: 147 DQSIVWQQLQTQNSTGKPFDVIHTESVGLRHT---------RARNLTNVVVSWHGIAYET 197
               +   L+      +  D++H    GL            R   +   VVS HG+    
Sbjct: 73  FPPSLLAWLR---LNIREADIVHVH--GLWSYPSLAAARAARKYGIP-YVVSPHGMLDPW 126

Query: 198 I--HSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMI 255
              H  + + L        A+ L ER  ++++        A   ATS+        I  +
Sbjct: 127 ALPHKALKKRL--------AWFLFER--RLLQAA------AAVHATSE---QEAAEIRRL 167

Query: 256 -PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEA 314
             +  + VI NGVD   F    + G   ++KF I  ++ ++L + GRL   KG  L+ EA
Sbjct: 168 GLKAPIAVIPNGVDIPPFAALPSRG--RRRKFPILPDKRIILFL-GRLHPKKGLDLLIEA 224

Query: 315 LKQLLAENDTFRRSTVFLVAGDGPWG--------ARYRDLGTNVIVLGPL-DQTRLAMFY 365
             +L      +      ++AG    G        A    L   V   G L  + + A   
Sbjct: 225 FAKLAERFPDWH----LVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALA 280

Query: 366 NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVK 425
           +A D+FV P+  ++     V EA+  G P++ T         ++    G++    V+++ 
Sbjct: 281 DA-DLFVLPS-HSENFGIVVAEALACGTPVVTTDKVPWQE--LIEYGCGWVVDDDVDALA 336

Query: 426 KALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYE 464
            AL     +  + L+  G   R      F+ T +A    
Sbjct: 337 AAL-RRALELPQRLKAMGENGRALVEERFSWTAIAQQLL 374

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score = 83.5 bits (207), Expect = 1e-17
 Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 30/217 (13%)

Query: 253 YMI-----PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKG 307
           Y I        +  V+ NG+D + F+ D A     +   G+  +  ++L   GRLV+ K 
Sbjct: 144 YFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILA-VGRLVEAKD 202

Query: 308 HPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGA-------RYRDLGTNVIVLGPLDQTR 360
           +P + +A  +LL++    +     L+AGDGP  A           L   V +LG  D   
Sbjct: 203 YPNLLKAFAKLLSDYLDIK----LLIAGDGPLRATLERLIKAL-GLSNRVKLLGLRDDI- 256

Query: 361 LAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSV--IVGTDMGYLFS 418
            A +YNA D+FV  +   +G    V EAM    P++AT      G V  +VG D G +  
Sbjct: 257 -AAYYNAADLFVLSSAW-EGFGLVVAEAMACELPVVATD----AGGVREVVG-DSGLIVP 309

Query: 419 PQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNLF 454
               E++   +  I     E  +  G   R+R +  F
Sbjct: 310 ISDPEALANKIDEILKMSGEERDIIG-ARRERIVKKF 345

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 82.3 bits (204), Expect = 5e-17
 Identities = 52/174 (29%), Positives = 68/174 (39%), Gaps = 28/174 (16%)

Query: 255 IPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEA 314
            P E+VHV   GVD   F P              P  R   +   GR V+ KG  L+ EA
Sbjct: 162 FPPEKVHVHPIGVDTAKFTPAT------------PARRPPRILFVGRFVEKKGPLLLLEA 209

Query: 315 LKQLLAENDTFRRSTVFLVAGDGPWGARYRDL------GTNVIVLGPLDQTRLAMFYNAI 368
             +L       R     ++ GDGP  A    L      G  V  LG      +       
Sbjct: 210 FARLARRVPEVR----LVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRA 265

Query: 369 DIFVNPTLRA-----QGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLF 417
            IF+ P++ A     +GL   +LEA  SG P++ATR   I  +V  G   G L 
Sbjct: 266 RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGET-GLLV 318

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 295 VLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARY------RDLGT 348
           ++   GRLV +KG  L+ EA   L  ++     +   ++ GDG    +         L  
Sbjct: 4   IILFVGRLVPEKGLDLLLEAFALLKEQHP----NLKLVIVGDGEEEKKLKKLALKLGLED 59

Query: 349 NVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVI 408
           NVI +G +    L   Y   D+FV P+    G    +LEAM +G P++AT        ++
Sbjct: 60  NVIFVGFVPDEDLIELYRIADLFVLPSRYE-GFGLVLLEAMAAGVPVIATD-VGGPAEIV 117

Query: 409 VGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKR 449
              + G L  P   E++ +A+        E+ E+ G  ARKR
Sbjct: 118 KDGETGLLVDPGDAEALAEAIE-KLLKDEELRERLGENARKR 158

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 79.6 bits (197), Expect = 5e-16
 Identities = 56/227 (24%), Positives = 89/227 (39%), Gaps = 34/227 (14%)

Query: 255 IPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEA 314
           +P E++ VI NGVD E+FKP     +  +K+ G+      V+  AG + + +G   + EA
Sbjct: 185 VPPEKISVIPNGVDLELFKP-PPADESLRKELGLD--DKFVVLYAGNIGRAQGLDTLLEA 241

Query: 315 LKQLLAENDTFRRSTVFLVAGDGP----WGARYRDLG-TNVIVLGPLDQTRLAMFYNAID 369
              L    D       FL+ GDGP         + LG  NV  LG + +  L     A D
Sbjct: 242 AALLKDRPD-----IRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAAD 296

Query: 370 IFVNPTLRAQGLDHTV----LEAMLSGKPLMATRLASIVGSVIVGTDM-------GYLFS 418
           + + P       +        E M +GKP        ++ SV   +         G +  
Sbjct: 297 VGLVPLKPGPAFEGVSPSKLFEYMAAGKP--------VLASVDGESAELVEEAGAGLVVP 348

Query: 419 P-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYE 464
           P   E++  A+  +  D  E   + G   R+     F+  K+A    
Sbjct: 349 PGDPEALAAAILEL-LDDPEERAEMGENGRRYVEEKFSREKLAERLL 394

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 74.2 bits (183), Expect = 2e-14
 Identities = 84/403 (20%), Positives = 136/403 (33%), Gaps = 84/403 (20%)

Query: 91  HAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLY----------FHLSKP 140
             GG E  A  L  ALAKRGHE+ + TA   +       +  +                 
Sbjct: 13  SVGGAEVVAHDLAEALAKRGHEVAVLTAG-EDPPRQDKEVIGVVVYGRPIDEVLRSALPR 71

Query: 141 TAAGYLDQS--IVWQQLQTQNSTGKPFDVIHTESV------GLRHTRARNLTNVVVSWHG 192
                 D     V  +        +P DV+H   +       LR  R R +  +V+    
Sbjct: 72  DLFHLSDYDNPAVVAEFARLLEDFRP-DVVHFHHLQGLGVSILRAARDRGI-PIVL---- 125

Query: 193 IAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI 252
               T+H                + +  R     +           +A S    D     
Sbjct: 126 ----TLHD--------------YWLICPRQGLFKKGGDAV------IAPSRFLLDRYVA- 160

Query: 253 YMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMF 312
             +  E++ VI NG+D +  K          ++   P    L  G  G+L   KG  L+ 
Sbjct: 161 NGLFAEKISVIRNGIDLDRAKR--------PRRA--PPGGRLRFGFIGQLTPHKGVDLLL 210

Query: 313 EALKQLLAENDTFRRSTVFLVAGDGPWGARYR---DLGTNVIVLGPLDQTRLAMFYNAID 369
           EA K+L   +          + G+G          +    V  LG   Q  +  FY  ID
Sbjct: 211 EAFKRLPRGDIELV------IVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEID 264

Query: 370 IFVNPTL--RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQ-VESVKK 426
           + V P++      L   + EA+ +G P++A+ +  +   V  G + G LF P   E +  
Sbjct: 265 VLVVPSIWPENFPL--VIREALAAGVPVIASDIGGMAELVRDGVN-GLLFPPGDAEDLAA 321

Query: 427 ALYGIWADGREVLEKKGLVARKR--GLNLFTATKMAAAYERLF 467
           AL         +++   L+ R R       +    A  Y +L+
Sbjct: 322 AL-------ERLIDDPDLLERLRAGIEPPRSIEDQAEEYLKLY 357

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359

>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system

 Score = 73.1 bits (180), Expect = 6e-14
 Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 24/256 (9%)

Query: 226 VEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKK 285
             E + F      +  S +  ++L   Y IP+E++ VI NG+ +E         K  +KK
Sbjct: 161 EREKEMFQLADRVICLSQYTQNLLYEDYGIPKEKIVVIYNGLTDEAIYLSEVERKKLRKK 220

Query: 286 FGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD 345
            G  E+  ++L   GRL + KG   + EA K +L ++   R     ++ GDG +    ++
Sbjct: 221 LGFSEDEKIIL-FVGRLDEIKGVDYLIEAFKIVLKKDPNCR----LVIVGDGDYSRYLQE 275

Query: 346 LG---TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT---- 398
                + +   G LD+ +L   Y   D+ V P+   Q   +  +E M+ G PL+ T    
Sbjct: 276 CKKIWSKITFTGKLDKEKLYELYQIADVGVLPSFHEQ-CSYVAIEMMMHGLPLIGTTSTG 334

Query: 399 -------RLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGL 451
                   L      +    D  Y+   + E V+K L  + +        K   AR+R L
Sbjct: 335 LSEMIEDGLNGYKIPIKEYRD--YVELDKKELVQKLLKLLSSSDEAKQMGKN--ARRRYL 390

Query: 452 NLFTATKMAAAYERLF 467
             ++   M    + L+
Sbjct: 391 EKYSLEVMRENMKSLY 406

Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 68.8 bits (169), Expect = 1e-12
 Identities = 88/409 (21%), Positives = 137/409 (33%), Gaps = 93/409 (22%)

Query: 77  LKIALFVKKWPHR-----SHAGGLERHALTLHLALAKRGHELHIFTA--SCLNCSFPTYP 129
           ++IAL     P R        GG ER    L   L  RGHE+ +F +  S          
Sbjct: 1   MRIALVA---PPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVV 57

Query: 130 ISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVS 189
              L         A     ++  + L         FD++H  S+ L    AR L   VV+
Sbjct: 58  PEPLRLDAPGRDRAEAEALALAERALAA-----GDFDIVHNHSLHLPLPFARPLPVPVVT 112

Query: 190 WHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVL 249
                  T+H          P+             V             V+ SD      
Sbjct: 113 -------TLH--------GPPDPELLKLYYAARPDV-----------PFVSISDA----- 141

Query: 250 KRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKG-H 308
           +R    P   V  + NG+D + +                  +  L L   GR+  +KG H
Sbjct: 142 QRRPWPPLPWVATVHNGIDLDDYPFRGP-----------KGDYLLFL---GRISPEKGPH 187

Query: 309 PLMFEALKQLLAENDTFRRSTVFL-VAG---DGPWGARYRD----LGTNVIVLGPLDQTR 360
                A++   A     RR+ + L +AG   D  +  R        G ++  LG +    
Sbjct: 188 ----LAIR--AA-----RRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAE 236

Query: 361 LAMFYNAIDIFVNPTLRAQ--GLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFS 418
            A         + P L  +  GL   ++EAM  G P++A R  + V  V+     G+L  
Sbjct: 237 KAELLGNARALLFPILWEEPFGL--VMIEAMACGTPVIAFRRGA-VPEVVEDGVTGFL-- 291

Query: 419 PQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
             V+SV++    +               R+R    F+A +M   Y  L+
Sbjct: 292 --VDSVEELAAAV----ARADRLDRAACRRRAERRFSAARMVDDYLALY 334

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 68.4 bits (168), Expect = 1e-12
 Identities = 75/328 (22%), Positives = 116/328 (35%), Gaps = 61/328 (18%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISS--LYF 135
           KI   +   P   +AGG ER    L  ALA++GHE+ I   S      P Y +       
Sbjct: 1   KILFVI---PSLGNAGGAERVLSNLANALAEKGHEVTII--SLDKGEPPFYELDPKIKVI 55

Query: 136 HLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVI---HTESVGLRHTRARNLTNVVVSWHG 192
            L     +  L +    ++L+      KP DV+    T  +    +    +  ++VS H 
Sbjct: 56  DLGDKRDSKLLARFKKLRRLRKLLKNNKP-DVVISFLTSLLTFLASLGLKIVKLIVSEH- 113

Query: 193 IAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI 252
            + +     + + LLR         L  RA  V             V  ++         
Sbjct: 114 NSPDAYKKRLRRLLLR-------RLLYRRADAV-------------VVLTEE---DRALY 150

Query: 253 YMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMF 312
           Y    + V VI N +     +P                    +L   GRLV  KG  L+ 
Sbjct: 151 YKKFNKNVVVIPNPLPFPPEEP------------SSDLKSKRIL-AVGRLVPQKGFDLLI 197

Query: 313 EALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYN 366
           EA  ++  ++  ++      + GDGP             L   VI+LG      +  +Y 
Sbjct: 198 EAWAKIAKKHPDWK----LRIVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYA 251

Query: 367 AIDIFVNPTLRAQGLDHTVLEAMLSGKP 394
              IFV  + R +G    +LEAM  G P
Sbjct: 252 KASIFVLTS-RFEGFPMVLLEAMAFGLP 278

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 66.1 bits (161), Expect = 2e-12
 Identities = 44/127 (34%), Positives = 55/127 (43%), Gaps = 15/127 (11%)

Query: 299 AGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARY------RDLGTNVIV 352
            GRL  +KG   + EA   L       +     ++AGDGP             L   VI 
Sbjct: 110 VGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGPEREYLEELLAALLLLDRVIF 165

Query: 353 LGPLDQT-RLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG 410
           LG LD    LA+   A D+FV P+LR   GL   VLEAM  G P++AT +      V  G
Sbjct: 166 LGGLDPEELLALLLAAADVFVLPSLREGFGL--VVLEAMACGLPVIATDVGGPPEIVEDG 223

Query: 411 TDMGYLF 417
              G L 
Sbjct: 224 LT-GLLV 229

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family

 Score = 67.2 bits (164), Expect = 4e-12
 Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 30/227 (13%)

Query: 247 DVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK 306
           D+LK    +  E+VHVI NG+D + +KPD   G     ++GI  +R  +L   GR+ + K
Sbjct: 158 DILKYYPDLDPEKVHVIYNGIDTKEYKPD--DGNVVLDRYGIDRSRPYIL-FVGRITRQK 214

Query: 307 GHPLMFEALKQLLAENDTFRRSTVFLVAG--DGPWGAR-YRDL-------GTNVIVLGP- 355
           G P + +A+  +  +        V L AG  D P  A   R          T +I +   
Sbjct: 215 GVPHLLDAVHYIPKD------VQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKM 268

Query: 356 LDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGY 415
           L +  L    +  ++FV P++  + L    LEAM  G P++A+    I   V+V  + G+
Sbjct: 269 LPKEELVELLSNAEVFVCPSIY-EPLGIVNLEAMACGTPVVASATGGI-PEVVVDGETGF 326

Query: 416 LFSPQ-------VESVKKALYGIWADGREVLEKKGLVARKRGLNLFT 455
           L  P           + KA+  + AD  E+ +K G+  RKR    F+
Sbjct: 327 LVPPDNSDADGFQAELAKAINILLAD-PELAKKMGIAGRKRAEEEFS 372

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388

>gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 65.3 bits (160), Expect = 1e-11
 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 18/172 (10%)

Query: 230 KFFPKYA-HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGI 288
           K   + A  ++A S+  G  L     +  ++  VI NG+D E F  +  + K  +++ GI
Sbjct: 132 KLINRLATDYLACSEEAGKWLFG--KVKNKKFKVIPNGIDLEKFIFNEEIRKK-RRELGI 188

Query: 289 PENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW------GAR 342
            E+   V+G  GR  + K H  + E   +LL +N     + + LV GDG          +
Sbjct: 189 LED-KFVIGHVGRFSEQKNHEFLIEIFAELLKKNP---NAKLLLV-GDGELEEEIKKKVK 243

Query: 343 YRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP 394
              L   VI LG  +         A+D+F+ P+L  +GL   ++EA  SG P
Sbjct: 244 ELGLEDKVIFLGVRNDV--PELLQAMDVFLFPSLY-EGLPLVLIEAQASGLP 292

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358

>gnl|CDD|222130 pfam13439, Glyco_transf_4, Glycosyltransferase Family 4

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 45/191 (23%), Positives = 68/191 (35%), Gaps = 41/191 (21%)

Query: 93  GGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSL-------YFHLSKPTAAGY 145
           GG+ER  L L  ALA+RGHE+ +             P+             LS   A   
Sbjct: 12  GGVERVVLELARALARRGHEVTVV------APELGRPLEEELGVILVSVPGLSFKRALRS 65

Query: 146 L-DQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQ 204
                 + + L+ +      FD++H+                V++ HG          + 
Sbjct: 66  PAFVFALRRLLKKER-----FDLVHSHH---PAALLFADVPAVLTVHGTWPLRFIYSSLS 117

Query: 205 EL--LRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHV 262
               L  P E + +  A+    V EEV         +A     G        +PEE++ V
Sbjct: 118 PYEVLELPLERRLFRRADAVIAVSEEVA------DELA---RYG--------VPEEKIRV 160

Query: 263 ILNGVDEEVFK 273
           I NGVD E F+
Sbjct: 161 IPNGVDTERFR 171

Length = 171

>gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 83/402 (20%), Positives = 139/402 (34%), Gaps = 81/402 (20%)

Query: 93  GGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLY-----FHLSKPTAAGYLD 147
           GG E     L   L  RGHE+ ++   C +         + Y      H+  P   G L 
Sbjct: 15  GGFETFVEELAPRLVARGHEVTVY---CRSPYPKQKE--TEYNGVRLIHIPAP-EIGGLG 68

Query: 148 QSI-VWQQLQTQNSTGKPFDVIHTESVG---------LRHTRARNLTNVVVSWHGIAYE- 196
             I     +       +  D +H   +G         LR    + + N+     G+ ++ 
Sbjct: 69  TIIYDILAILHALFVKRDIDHVHA--LGPAIAPFLPLLRLKGKKVVVNM----DGLEWKR 122

Query: 197 TIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCG--DVLKRIYM 254
                  +  L+           E+ +          K+A  +  +D  G  + LK  Y 
Sbjct: 123 AKWGRPAKRYLK---------FGEKLAV---------KFADRL-IADSPGIKEYLKEKYG 163

Query: 255 IPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEA 314
                   I  G D        +   +  KK+G+   R  +L   GR+V +     + EA
Sbjct: 164 R---DSTYIPYGADH----VVSSEEDEILKKYGLEPGRYYLL--VGRIVPENNIDDLIEA 214

Query: 315 LKQLLAENDTFRRSTVFLVAGD----GPWGARYRDL---GTNVIVLGPL-DQTRLAMFYN 366
             +              ++ G+     P+G   ++       +I +GP+ DQ  L +   
Sbjct: 215 FSKS-------NSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRY 267

Query: 367 AIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS-IVGSVIVGTDMGYLFSPQVESVK 425
           A  +F        G + ++LEAM  G P+    LAS    +  V  D    F    + + 
Sbjct: 268 A-ALFYLHGHSVGGTNPSLLEAMAYGCPV----LASDNPFNREVLGDKAIYFK-VGDDLA 321

Query: 426 KALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
             L  + AD  EV       AR+R    +T  K+A  YE L+
Sbjct: 322 SLLEELEADPEEV-SAMAKAARERIREKYTWEKIADQYEELY 362

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363

>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family

 Score = 59.2 bits (144), Expect = 2e-09
 Identities = 51/187 (27%), Positives = 75/187 (40%), Gaps = 30/187 (16%)

Query: 234 KYAHHVATSDHC----GDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIP 289
           + A  V T   C    GD++ R   IP E++ VI N VD ++F            + G+ 
Sbjct: 156 RRADAVTTI--CEGLRGDLVAR--GIPAEKITVIPNAVDLDLFGLPAPRDPALAAELGLE 211

Query: 290 ENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL--- 346
                V+G  G     +G  L+  AL +LL  +   R   + LV G GP     R     
Sbjct: 212 GAP--VIGFIGSFYAYEGLDLLVAALPRLLRRHPDAR---LLLVGG-GPQEEALRAQAAA 265

Query: 347 ---GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTV-----LEAMLSGKPLMAT 398
                 V+  G +    +  +Y+ ID+   P L  + L   V     LEAM  G+ +   
Sbjct: 266 LGLADRVVFTGRVPHDEVERYYSLIDVLAYPRLPMR-LTELVTPLKPLEAMAQGRLV--- 321

Query: 399 RLASIVG 405
             AS VG
Sbjct: 322 -AASDVG 327

PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397

>gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

 Score = 58.6 bits (142), Expect = 3e-09
 Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 23/182 (12%)

Query: 249 LKRIY--MIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK 306
           LK+ Y   +P   + ++ NG   E ++ +     + +++  I  + +++L  AGR+  DK
Sbjct: 150 LKKFYEERLPNADISIVPNGFCLETYQSNPQ--PNLRQQLNISPDETVLL-YAGRISPDK 206

Query: 307 GHPLMFEALKQLLAENDTFRRSTVFLVAGD------GPWGARYRD-------LGTNVIVL 353
           G  L+ +A ++L   +   +     +V GD      G   A  +        +G   I+L
Sbjct: 207 GILLLMQAFEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIML 262

Query: 354 GPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDM 413
           G     ++  +Y   D+ V P+   +      +EAM +GKP++A+    I   V+ G   
Sbjct: 263 GGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGI-T 321

Query: 414 GY 415
           GY
Sbjct: 322 GY 323

Length = 380

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 11/142 (7%)

Query: 294 LVLGMAGRLVKDKGHPLMF-EALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIV 352
           + +G  G      G   +  EAL  L              + G GP       L  NV  
Sbjct: 3   VFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVE----LHIIGSGP--EELARLAPNVHF 56

Query: 353 LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTD 412
           LG ++   LA    + D+ + P     G    +LEA+ +G P++AT +      +     
Sbjct: 57  LGFVED--LAALLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIG--AEGLPEDLG 112

Query: 413 MGYLFSPQVESVKKALYGIWAD 434
            G L +   E   +A+  + AD
Sbjct: 113 WGVLVADDPEEFAEAIVRLLAD 134

Length = 134

>gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

 Score = 56.3 bits (136), Expect = 2e-08
 Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 23/200 (11%)

Query: 229 VKFFPKYAH-HVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP---DVAMGKDFKK 284
           ++F  + A   + TS   G  L+   +    R+ V   GVD E F P      M    + 
Sbjct: 199 IRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRA--RL 256

Query: 285 KFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYR 344
             G PE    ++   GRL  +K      + LK+++      R + V    GDGP+     
Sbjct: 257 SGGEPEKP--LIVYVGRLGAEKN----LDFLKRVMERLPGARLAFV----GDGPYREELE 306

Query: 345 DL--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATR--- 399
            +  GT  +  G L    L+  Y + D+FV P+  ++ L   VLEAM SG P++A R   
Sbjct: 307 KMFAGTPTVFTGMLQGDELSQAYASGDVFVMPS-ESETLGFVVLEAMASGVPVVAARAGG 365

Query: 400 LASIVGSVIVGTDMGYLFSP 419
           +  I+     G   G+L++P
Sbjct: 366 IPDIIPPDQEG-KTGFLYTP 384

Length = 465

>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 54.5 bits (132), Expect = 7e-08
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 42/233 (18%)

Query: 256 PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEAL 315
             E++ VI NG+D E F P         ++    +    V+G+ GR+V  K       A 
Sbjct: 265 DPEKIRVIPNGIDPERFAP--------ARRARPEKEP-PVVGLIGRVVPIKDIKTFIRAA 315

Query: 316 KQLLAENDTFRRSTVFLVAGDGPWGARYRD----------LGTNVIVLGPLDQTRLAMFY 365
             +  +           V G       Y +          L  NV   G  +        
Sbjct: 316 AIVRKKIPDAE----GWVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEY---L 368

Query: 366 NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSV---IVGTDM------GYL 416
             +D+ V  T  ++G    +LEAM +G P++AT     VGS    I G D       G +
Sbjct: 369 PKLDVLV-LTSISEGQPLVILEAMAAGIPVVATD----VGSCRELIEGADDEALGPAGEV 423

Query: 417 FSPQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFL 468
             P   E++ +A+  +  D  E+    G   RKR    +T  +M  +Y RL+L
Sbjct: 424 VPPADPEALARAILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475

>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase

 Score = 52.4 bits (126), Expect = 3e-07
 Identities = 77/351 (21%), Positives = 125/351 (35%), Gaps = 79/351 (22%)

Query: 92  AGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIV 151
           AGG+  + L     LA+RG E+ IFT                     + T         V
Sbjct: 19  AGGMNVYILETATELARRGIEVDIFT---------------------RATRPSQPPVVEV 57

Query: 152 WQQLQTQNSTGKPFDVIHTESV---------GLRHTRARNLTNVVVSWHGIAYETIHSD- 201
              ++ +N    P++ +  E +         G+    AR+            Y+ IHS  
Sbjct: 58  APGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARH--------EPGYYDLIHSHY 109

Query: 202 --------IIQELLRTPEEPQAYALA-------------ERASKVVEEVKFFPKYAHHVA 240
                   ++++    P    A+ LA             E  ++ + E +        +A
Sbjct: 110 WLSGQVGWLLRDRWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIA 169

Query: 241 TSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP-DVAMGKDFKKKFGIPENRSLVLGMA 299
            +D     L R Y    +R+ V+  G D E F+P D A     + + G+P   + V+   
Sbjct: 170 NTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATE---RARLGLPL-DTKVVAFV 225

Query: 300 GRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-DGPWGAR---YRDLGTN------ 349
           GR+   K   ++  A+ +LL + D  R   V +V G  G   A      +L         
Sbjct: 226 GRIQPLKAPDVLLRAVAELL-DRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADR 284

Query: 350 VIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ-GLDHTVLEAMLSGKPLMATR 399
           V  L P     L   Y A D+   P+     GL    +EA   G P++A R
Sbjct: 285 VRFLPPRPPEELVHVYRAADVVAVPSYNESFGL--VAMEAQACGTPVVAAR 333

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

>gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 51.8 bits (125), Expect = 5e-07
 Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 29/135 (21%)

Query: 233 PKYAHHVATSDH-CG--DVLKRIYMIPEERVHVILNGVDEEVFKP------------DVA 277
           P YA  + T +   G   +L+        ++  ILNG+D +V+ P            D  
Sbjct: 219 PTYAREILTPEFGEGLDGLLRAR----AGKLSGILNGIDYDVWNPATDPHLPANYSADDL 274

Query: 278 MGK-----DFKKKFGIPENRS-LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVF 331
            GK       +++ G+P +    + G  GRL + KG  L+ EAL +LL          V 
Sbjct: 275 EGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQL----VI 330

Query: 332 LVAGDGPWGARYRDL 346
           L +GD  +    R+L
Sbjct: 331 LGSGDPEYEEALREL 345

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476

>gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 50.7 bits (122), Expect = 8e-07
 Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 34/220 (15%)

Query: 262 VILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAE 321
           VI N VDE+ F+P     +  K++ G PE   +++           H   F  +K++   
Sbjct: 169 VIPNFVDEDRFRPKPD--EALKRRLGAPEGEKVLI-----------HISNFRPVKRIDDV 215

Query: 322 NDTF------RRSTVFLVAGDGP------WGARYRDLGTNVIVLGPLDQTRLAMFYNAID 369
              F        + + LV GDGP        AR   L  +V+ LG   Q  +    +  D
Sbjct: 216 IRIFAKVRKEVPARLLLV-GDGPERSPAERLARELGLQDDVLFLGK--QDHVEELLSIAD 272

Query: 370 IFVNP-TLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKA 427
           +F+ P    + GL    LEAM  G P++A+    I   V  G   G+L     VE++ + 
Sbjct: 273 LFLLPSEKESFGL--AALEAMACGVPVVASNAGGIPEVVKHGET-GFLVDVGDVEAMAEY 329

Query: 428 LYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
              +  D  E+ ++    AR R    F + ++   YE L+
Sbjct: 330 ALSLLEDD-ELWQEFSRAARNRAAERFDSERIVPQYEALY 368

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score = 50.3 bits (121), Expect = 1e-06
 Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 28/223 (12%)

Query: 256 PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG-RLVKDKGHPL-MFE 313
            ++ + VI N VD + ++         K+K G PE+  +++ ++  R VK     + +F 
Sbjct: 165 IDKPIEVIPNFVDTDRYRRKND--PALKRKLGAPEDEKVLIHISNFRPVKRVEDVIEVFA 222

Query: 314 ALKQLLAENDTFRRSTVFLVAGDGP------WGARYRDLGTNVIVLGPLDQTRLAMFYNA 367
            ++Q              L+ GDGP         R   L   V+ LG  D   +A   + 
Sbjct: 223 RVQQ--------EVPAKLLLVGDGPERSPAEQLVRELGLTDRVLFLGKQD--DVAELLSI 272

Query: 368 IDIFVNP-TLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESV- 424
            D+F+ P    + GL    LEAM  G P++A+    I   V+     G+L     VE++ 
Sbjct: 273 SDLFLLPSEKESFGL--AALEAMACGVPVIASNAGGI-PEVVEHGVTGFLCDVGDVETMA 329

Query: 425 KKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
           + A+  +  D  E+L++    AR+R    F + K+   YE L+
Sbjct: 330 EYAIS-LLEDE-ELLQRFSAAARERAKERFDSEKIVPQYEALY 370

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 41/178 (23%), Positives = 62/178 (34%), Gaps = 24/178 (13%)

Query: 93  GGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVW 152
           GG ER+ L L  ALA RGHE+ + T                   L  P            
Sbjct: 1   GGAERYVLELARALAARGHEVTVVTPRGPPGRPELEEDGVRVHRLPVPRRPSLPGDLRAL 60

Query: 153 QQLQTQNSTGKPFDVIHTES----VGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLR 208
           ++L+      +P DV+H       +  R    R    VVV+ HG+A              
Sbjct: 61  RRLRRLLRRERP-DVVHAHGPLAGLLARLAARRRGVPVVVTPHGLALRQ----------G 109

Query: 209 TPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNG 266
           +  + +     ER            +    VA S+   ++L+    +P  RV V+ NG
Sbjct: 110 SGLKRRLARALERR--------LLRRADAVVAVSEAEAELLRA-LGVPAARVVVVPNG 158

Length = 158

>gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type

 Score = 48.4 bits (116), Expect = 5e-06
 Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 29/125 (23%)

Query: 233 PKYAHHVATSDH-CG--DVLKRIYMIPEERVHVILNGVDEEVFKP-------------DV 276
           P YA  + T +   G   VLK        ++  ILNG+D EV+ P             D+
Sbjct: 214 PTYAREILTPEFGYGLDGVLKAR----SGKLRGILNGIDTEVWNPATDPYLKANYSADDL 269

Query: 277 AMGKDFKK----KFGIPEN-RSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVF 331
           A   + K+    + G+P +    + G+  RL + KG  L+  AL +LL          V 
Sbjct: 270 AGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQL----VV 325

Query: 332 LVAGD 336
           L  GD
Sbjct: 326 LGTGD 330

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473

>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 47.6 bits (114), Expect = 8e-06
 Identities = 77/346 (22%), Positives = 124/346 (35%), Gaps = 68/346 (19%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHL 137
           +IA  V  +P R    G+      L  AL+ RG ++ +        S      S LY   
Sbjct: 1   RIA-LVSPYPPR--KCGIATFTTDLVNALSARGPDVLVV-------SVAALYPSLLYGGE 50

Query: 138 SKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYET 197
            +      LD  + +++         P DV+      ++H             +GI +  
Sbjct: 51  QEVVRVIVLDNPLDYRRAARAIRLSGP-DVVV-----IQH------------EYGI-FGG 91

Query: 198 IHSDIIQELLRTPEEPQAY-----ALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI 252
                +  LLR    P         L E        ++   + A  V       ++L+ +
Sbjct: 92  EAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLRRADAVIV--MSSELLRAL 149

Query: 253 YMI-PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM 311
            +    E++ VI +GV +   +P      +  K  G  + R  VL   G L   KG  L+
Sbjct: 150 LLRAYPEKIAVIPHGVPDPPAEP-----PESLKALGGLDGR-PVLLTFGLLRPYKGLELL 203

Query: 312 FEALKQLLAENDTFRRSTVFLVAGDGPWG--ARYR----------DLGTNVI-VLGPLDQ 358
            EAL  L+A++   R     LVAG        RYR           L   VI +   L  
Sbjct: 204 LEALPLLVAKHPDVR----LLVAG-ETHPDLERYRGEAYALAERLGLADRVIFINRYLPD 258

Query: 359 TRLAMFYNAIDIFVNPTLRAQ----GLDHTVLEAMLSGKPLMATRL 400
             L   ++A D+ V P   A     G    +  A+  GKP+++T +
Sbjct: 259 EELPELFSAADVVVLPYRSADQTQSG---VLAYAIGFGKPVISTPV 301

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366

>gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 25/159 (15%)

Query: 256 PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEAL 315
           P E++ V   GVD   F P         K    P    L +    RL + KG  +  EA 
Sbjct: 195 PPEKIAVSRMGVDMTRFSPRP------VKAPATP----LEIISVARLTEKKGLHVAIEAC 244

Query: 316 KQLLAENDTFRRSTVFLVAGDGPWGARYR------DLGTNVIVLGPLDQTRLAMFYNAID 369
           +QL  +   FR    + + G GPW  R R       L   V + G      +    +  D
Sbjct: 245 RQLKEQGVAFR----YRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDAD 300

Query: 370 IFVNPTLRA-----QGLDHTVLEAMLSGKPLMATRLASI 403
           +F+ P++       +G+   ++EAM  G P+++T  + I
Sbjct: 301 VFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGI 339

Length = 406

>gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 46.4 bits (111), Expect = 2e-05
 Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 31/185 (16%)

Query: 254 MIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFE 313
            +  ERV VI N VD   F PD       K+         + + +  RLV  KG  L+  
Sbjct: 164 SLDPERVSVIPNAVDSSDFTPD-----PSKRDNDK-----ITIVVISRLVYRKGIDLLVG 213

Query: 314 ALKQLLAENDTFRRSTVFLVAGDGP-------WGARYRDLGTNVIVLGPLDQTRLAMFYN 366
            + ++  ++   R    F++ GDGP          +Y  L   V +LG +   R+     
Sbjct: 214 IIPEICKKHPNVR----FIIGGDGPKRILLEEMREKYN-LQDRVELLGAVPHERVRDVLV 268

Query: 367 AIDIFVNPTL-RAQGLDHTVLEAMLSGKPLMATRLASIVGSV--IVGTDMGYLFSPQVES 423
              IF+N +L  A  +   ++EA   G  +++TR    VG +  ++  DM  L  P VES
Sbjct: 269 QGHIFLNTSLTEAFCI--AIVEAASCGLLVVSTR----VGGIPEVLPPDMILLAEPDVES 322

Query: 424 VKKAL 428
           + + L
Sbjct: 323 IVRKL 327

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398

>gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 23/131 (17%)

Query: 233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP--DVAMGKDF-------- 282
           P YA  +   +  G  L  +     +R+  ILNG+D  V+ P  D  +   +        
Sbjct: 218 PTYALEIQGPEA-GMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAAR 276

Query: 283 -------KKKFGI-PENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVA 334
                  + +FG+ P+  +L+LG+  RL   KG  L+ EAL  LL E          L +
Sbjct: 277 AANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQL----ALLGS 332

Query: 335 GDGPWGARYRD 345
           GD    AR+R 
Sbjct: 333 GDAELEARFRA 343

Length = 485

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 45.6 bits (109), Expect = 3e-05
 Identities = 46/142 (32%), Positives = 56/142 (39%), Gaps = 34/142 (23%)

Query: 299 AGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLV-AGDGPWGARYRDL-GTNVIVLGPL 356
            GRLV  K   L  EA          F +    LV  GDGP   R R   G NV  LG +
Sbjct: 201 VGRLVPYKRIDLAIEA----------FNKLGKRLVVIGDGPELDRLRAKAGPNVTFLGRV 250

Query: 357 DQTRLAMFYNAIDIFVNPTLRAQGL------DH--TVLEAMLSGKPLMATRLASIVGSVI 408
               L   Y           RA+        D     +EAM SG P++A      + +VI
Sbjct: 251 SDEELRDLYA----------RARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGGALETVI 300

Query: 409 VG-TDMGYLFSPQ-VESVKKAL 428
            G T  G LF  Q VES+  A+
Sbjct: 301 DGVT--GILFEEQTVESLAAAV 320

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

>gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 45.4 bits (107), Expect = 6e-05
 Identities = 48/227 (21%), Positives = 85/227 (37%), Gaps = 28/227 (12%)

Query: 255 IPEERVHVILNGVDE--EVFKP-DVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM 311
           + E R+ V+ NG+     V      AM   F  +     +    +G   R+  +K   L 
Sbjct: 479 VDERRIPVVYNGLAPLKSVQDDACTAMMAQFDAR---TSDARFTVGTVMRVDDNKRPFLW 535

Query: 312 FEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLG-----TNVIVLGPLDQTRLAMFYN 366
            EA ++  A +   R    F++ G GP     R+          I+   L + R+  +  
Sbjct: 536 VEAAQRFAASHPKVR----FIMVGGGPLLESVREFAQRLGMGERILFTGLSR-RVGYWLT 590

Query: 367 AIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFS------PQ 420
             + F+  + R +GL + ++EA  SG P++ T LA   G  +     G          P 
Sbjct: 591 QFNAFLLLS-RFEGLPNVLIEAQFSGVPVVTT-LAGGAGEAVQEGVTGLTLPADTVTAPD 648

Query: 421 VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
           V      ++ + A    +  K    A       F+  +M A+  R +
Sbjct: 649 VAEALARIHDMCAADPGIARK----AADWASARFSLNQMIASTVRCY 691

Length = 694

>gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional

 Score = 45.1 bits (108), Expect = 7e-05
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 23/80 (28%)

Query: 263 ILNGVDEEVFKP----------DVAMGKDFKKK----------FGIPENRSLVLGMAGRL 302
           ILNG+D +++ P                D + K          FG+P++ + +  M  RL
Sbjct: 235 ILNGIDYDIWNPETDPLLAANYSA---DDLEGKAENKRALQERFGLPDDDAPLFAMVSRL 291

Query: 303 VKDKGHPLMFEALKQLLAEN 322
            + KG  L+ EAL +LL + 
Sbjct: 292 TEQKGLDLVLEALPELLEQG 311

Length = 466

>gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism]

 Score = 44.6 bits (106), Expect = 8e-05
 Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 29/135 (21%)

Query: 233 PKYAHHVATSD---HCGDVLKRIYMIPEERVHVILNGVDEEVFKPD-------------- 275
           P YA  + T +       +L         ++  ILNG+D +++ P+              
Sbjct: 217 PTYAGEIYTPEYGEGLEGLLSWR----SGKLSGILNGIDYDLWNPETDPYIAANYSAEVL 272

Query: 276 ---VAMGKDFKKKFGIPENRSLVL-GMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVF 331
                     +++ G+  +    L G   RL   KG  L+ EA+ +LL +        V 
Sbjct: 273 PAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQL----VL 328

Query: 332 LVAGDGPWGARYRDL 346
           L  GD       R L
Sbjct: 329 LGTGDPELEEALRAL 343

Length = 487

>gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 350 VIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLA 401
           V++ GP+    L   Y   D F  P+L+ +G    VLEA+ SG P++A+ +A
Sbjct: 259 VVITGPVPDADLPALYRCADAFAFPSLK-EGFGLVVLEALASGIPVVASDIA 309

A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373

>gnl|CDD|188520 TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 29/156 (18%)

Query: 256 PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEAL 315
           P E++ V   GVD   F           K  G P    L +    RL + KG  +  EA 
Sbjct: 195 PPEKIAVSRMGVDMTRFTHRPV------KAPGTP----LEIISVARLTEKKGLHVAIEAC 244

Query: 316 KQLLAENDTFRRSTVFLVAGDGPWGARYRDL----GTNVIV----LGPLDQTRLAMFYNA 367
           +QL A+   FR    + + G GPW  R R L        +V      P  + + AM  +A
Sbjct: 245 RQLKAQGVAFR----YRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVK-AMLDDA 299

Query: 368 IDIFVNPTLRA-----QGLDHTVLEAMLSGKPLMAT 398
            D+F+ P++       +G+   ++EAM  G P+++T
Sbjct: 300 -DVFLLPSVTGTDGDMEGIPVALMEAMAVGIPVVST 334

This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 406

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	488
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
PLN02316	1036	synthase/transferase	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
PRK14098	489	glycogen synthase; Provisional	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
PRK10125	405	putative glycosyl transferase; Provisional	100.0
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03825	365	GT1_wcfI_like This family is most closely related	100.0
TIGR02470	784	sucr_synth sucrose synthase. This model represents	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	100.0
cd03819	355	GT1_WavL_like This family is most closely related	100.0
cd04951	360	GT1_WbdM_like This family is most closely related	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
cd03802	335	GT1_AviGT4_like This family is most closely relate	100.0
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
cd03821	375	GT1_Bme6_like This family is most closely related	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
cd03809	365	GT1_mtfB_like This family is most closely related	100.0
cd03817	374	GT1_UGDG_like This family is most closely related	100.0
PLN02949	463	transferase, transferring glycosyl groups	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
cd03823	359	GT1_ExpE7_like This family is most closely related	100.0
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	100.0
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	100.0
cd03813	475	GT1_like_3 This family is most closely related to	100.0
cd03822	366	GT1_ecORF704_like This family is most closely rela	100.0
cd03794	394	GT1_wbuB_like This family is most closely related	100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
cd03812	358	GT1_CapH_like This family is most closely related	100.0
PLN00142	815	sucrose synthase	100.0
cd03798	377	GT1_wlbH_like This family is most closely related	100.0
cd03820	348	GT1_amsD_like This family is most closely related	100.0
cd03808	359	GT1_cap1E_like This family is most closely related	100.0
cd03811	353	GT1_WabH_like This family is most closely related	100.0
cd03804	351	GT1_wbaZ_like This family is most closely related	100.0
cd04946	407	GT1_AmsK_like This family is most closely related	100.0
PHA01630	331	putative group 1 glycosyl transferase	100.0
PLN02275	371	transferase, transferring glycosyl groups	100.0
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	100.0
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	100.0
PLN02501	794	digalactosyldiacylglycerol synthase	100.0
PHA01633	335	putative glycosyl transferase group 1	100.0
cd04949	372	GT1_gtfA_like This family is most closely related	99.97
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.97
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.96
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	99.96
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.96
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.96
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.96
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.95
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.95
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.95
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.95
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.95
PLN02605	382	monogalactosyldiacylglycerol synthase	99.95
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.94
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.94
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.93
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.92
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.92
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.91
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.9
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.9
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.9
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.89
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.88
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.87
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	99.84
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.81
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.8
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.75
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.72
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.65
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.64
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.63
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.63
PRK10117	474	trehalose-6-phosphate synthase; Provisional	99.57
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	99.57
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.53
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.52
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.5
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.49
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	99.48
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	99.46
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.42
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.42
TIGR03492	396	conserved hypothetical protein. This protein famil	99.4
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	99.39
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	99.38
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.36
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	99.32
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.29
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	99.2
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.19
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	99.18
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	99.18
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	99.17
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	99.13
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	99.06
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	99.02
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	99.01
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	99.0
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	98.98
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	98.95
PRK10017	426	colanic acid biosynthesis protein; Provisional	98.87
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	98.86
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	98.71
COG1817	346	Uncharacterized protein conserved in archaea [Func	98.7
PLN02448	459	UDP-glycosyltransferase family protein	98.66
COG4671	400	Predicted glycosyl transferase [General function p	98.64
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	98.56
PLN03007	482	UDP-glucosyltransferase family protein	98.43
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	98.39
PRK14089	347	ipid-A-disaccharide synthase; Provisional	98.35
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	98.32
PLN02208	442	glycosyltransferase family protein	98.32
PLN02210	456	UDP-glucosyl transferase	98.3
PLN00414	446	glycosyltransferase family protein	98.23
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	98.2
PF04413	186	Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid	98.16
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	98.14
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.98
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	97.97
KOG4626	966	consensus O-linked N-acetylglucosamine transferase	97.96
PLN02562	448	UDP-glycosyltransferase	97.95
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	97.93
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	97.68
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	97.66
PLN02173	449	UDP-glucosyl transferase family protein	97.6
PLN02207	468	UDP-glycosyltransferase	97.56
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.5
PLN02764	453	glycosyltransferase family protein	97.49
PF11440	355	AGT: DNA alpha-glucosyltransferase; InterPro: IPR0	97.44
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.4
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	97.36
PF11997	268	DUF3492: Domain of unknown function (DUF3492); Int	97.34
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	97.33
PLN02554	481	UDP-glycosyltransferase family protein	97.32
PLN02670	472	transferase, transferring glycosyl groups	97.3
PLN02167	475	UDP-glycosyltransferase family protein	97.29
COG2327	385	WcaK Polysaccharide pyruvyl transferase family pro	97.27
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	97.27
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	97.27
KOG1050	732	consensus Trehalose-6-phosphate synthase component	97.2
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	97.19
PLN02555	480	limonoid glucosyltransferase	97.18
PLN00164	480	glucosyltransferase; Provisional	97.18
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	97.13
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	97.01
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	97.01
PLN03004	451	UDP-glycosyltransferase	97.0
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	96.94
PLN02152	455	indole-3-acetate beta-glucosyltransferase	96.76
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	96.76
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	96.71
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	96.69
PLN02992	481	coniferyl-alcohol glucosyltransferase	96.48
PRK14986	815	glycogen phosphorylase; Provisional	95.95
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	95.65
PLN03015	470	UDP-glucosyl transferase	95.56
PLN02534	491	UDP-glycosyltransferase	95.52
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	95.37
PF12038	168	DUF3524: Domain of unknown function (DUF3524); Int	95.36
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	95.22
PRK14985	798	maltodextrin phosphorylase; Provisional	94.92
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	94.88
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	94.67
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	94.65
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	94.33
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	93.81
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	92.78
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	91.48
PF10093	374	DUF2331: Uncharacterized protein conserved in bact	90.91
PF10933	364	DUF2827: Protein of unknown function (DUF2827); In	90.28
COG4394	370	Uncharacterized protein conserved in bacteria [Fun	90.2
PF00862	550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	89.92
KOG3349	170	consensus Predicted glycosyltransferase [General f	88.75
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	88.57
PF03033	139	Glyco_transf_28: Glycosyltransferase family 28 N-t	86.04
TIGR03837	371	efp_adjacent_2 conserved hypothetical protein, PP_	84.14
COG1703	323	ArgK Putative periplasmic protein kinase ArgK and	83.81
COG2120	237	Uncharacterized proteins, LmbE homologs [Function	82.78
COG5017	161	Uncharacterized conserved protein [Function unknow	82.76
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	82.23
COG2910	211	Putative NADH-flavin reductase [General function p	82.01
PF02951	119	GSH-S_N: Prokaryotic glutathione synthetase, N-ter	82.0
PF01975	196	SurE: Survival protein SurE; InterPro: IPR002828 T	81.01

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=3.4e-44  Score=357.86  Aligned_cols=367  Identities=22%  Similarity=0.270  Sum_probs=270.9

Q ss_pred             CCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCC-CCccC-cchhHHH
Q 011355           74 LKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSK-PTAAG-YLDQSIV  151 (488)
Q Consensus        74 ~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~-~~~~~~~  151 (488)
                      .++|||++++..+|+ ...||++.++.+++++|.++||+|++++........ ..+...+...... +.... ...+...
T Consensus        56 ~~~mrI~~~~~~~~~-~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~  133 (465)
T PLN02871         56 SRPRRIALFVEPSPF-SYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQE-FHGAKVIGSWSFPCPFYQKVPLSLALS  133 (465)
T ss_pred             CCCceEEEEECCcCC-cccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCcc-ccCceeeccCCcCCccCCCceeeccCC
Confidence            688999999864444 368999999999999999999999999987543211 1111111111100 00000 0111111


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCcchHH------hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHH
Q 011355          152 WQQLQTQNSTGKPFDVIHTESVGLRH------TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKV  225 (488)
Q Consensus       152 ~~~~~~~~~~~~~~Dvv~~~~~~~~~------~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      . .+.+..++. +||+||+|+.....      ....++| ++.+.|+........        ...    ..+.+.+...
T Consensus       134 ~-~l~~~i~~~-kpDiIh~~~~~~~~~~~~~~ak~~~ip-~V~~~h~~~~~~~~~--------~~~----~~~~~~~~~~  198 (465)
T PLN02871        134 P-RIISEVARF-KPDLIHASSPGIMVFGALFYAKLLCVP-LVMSYHTHVPVYIPR--------YTF----SWLVKPMWDI  198 (465)
T ss_pred             H-HHHHHHHhC-CCCEEEECCCchhHHHHHHHHHHhCCC-EEEEEecCchhhhhc--------ccc----hhhHHHHHHH
Confidence            1 222222223 89999999753211      1234567 899999753321100        000    1111111111


Q ss_pred             HHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCC-CCCCcEEEEEEeeecc
Q 011355          226 VEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGI-PENRSLVLGMAGRLVK  304 (488)
Q Consensus       226 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i-~~~~~~~i~~~Grl~~  304 (488)
                      .  ..+++.+|.++++|+...+.+.+.+..+.+++.++|||+|.+.|.+... ....++++.. ++++ ++|+|+||+.+
T Consensus       199 ~--r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~-~~~~~~~~~~~~~~~-~~i~~vGrl~~  274 (465)
T PLN02871        199 I--RFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFR-SEEMRARLSGGEPEK-PLIVYVGRLGA  274 (465)
T ss_pred             H--HHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccc-cHHHHHHhcCCCCCC-eEEEEeCCCch
Confidence            1  1346789999999999999998854455789999999999988865433 2345655543 2344 78899999999


Q ss_pred             ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh--CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCC
Q 011355          305 DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLD  382 (488)
Q Consensus       305 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~  382 (488)
                      .||++.++++++.+        ++++|+|+|+|+..+.++++  ..+|+|+|+++.+++..+|+.||++|+||. .|++|
T Consensus       275 ~K~~~~li~a~~~~--------~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~-~E~~g  345 (465)
T PLN02871        275 EKNLDFLKRVMERL--------PGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSE-SETLG  345 (465)
T ss_pred             hhhHHHHHHHHHhC--------CCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCc-ccccC
Confidence            99999999988765        78999999999988887765  368999999999999999999999999997 59999


Q ss_pred             hHHHHHHHcCCcEEEeCCCCcccceeec---CCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHH
Q 011355          383 HTVLEAMLSGKPLMATRLASIVGSVIVG---TDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATK  458 (488)
Q Consensus       383 ~~~lEAma~G~PVI~~~~~~~~~e~v~~---~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~  458 (488)
                      ++++|||+||+|||+++.+|+. |++.+   +++|+++++ |+++++++|.+++++ ++.+++|++++++.++ +|||+.
T Consensus       346 ~~vlEAmA~G~PVI~s~~gg~~-eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~-~fsw~~  422 (465)
T PLN02871        346 FVVLEAMASGVPVVAARAGGIP-DIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMGAAAREEVE-KWDWRA  422 (465)
T ss_pred             cHHHHHHHcCCCEEEcCCCCcH-hhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH-hCCHHH
Confidence            9999999999999999999998 88888   999999998 999999999999998 9999999999999985 599999


Q ss_pred             HHHHHHH-HHHHhhcc
Q 011355          459 MAAAYER-LFLCISND  473 (488)
Q Consensus       459 ~~~~~~~-~~~~~~~~  473 (488)
                      +++++.+ .|++++..
T Consensus       423 ~a~~l~~~~Y~~~~~~  438 (465)
T PLN02871        423 ATRKLRNEQYSAAIWF  438 (465)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999997 69887764

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=9.8e-44  Score=350.62  Aligned_cols=371  Identities=16%  Similarity=0.181  Sum_probs=272.1

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC-----------CCCCCceEEEecCCCCc-cC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSF-----------PTYPISSLYFHLSKPTA-AG  144 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----------~~~~~~~i~~~~~~~~~-~~  144 (488)
                      |||++++..|+|  ..||++.++.+++++|.++||+|+|+|..+..+..           ......++.+....... ..
T Consensus         1 mkIlii~~~~~P--~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~   78 (412)
T PRK10307          1 MKILVYGINYAP--ELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQ   78 (412)
T ss_pred             CeEEEEecCCCC--CccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCC
Confidence            899999988877  57899999999999999999999999976421110           00112233333221100 00


Q ss_pred             cchhHH-------HHHHHHHHhcC-CCCCcEEEeCCcch----H-Hh--hhccCCcEEEeeeCCcchhhhhhhhHhhhcC
Q 011355          145 YLDQSI-------VWQQLQTQNST-GKPFDVIHTESVGL----R-HT--RARNLTNVVVSWHGIAYETIHSDIIQELLRT  209 (488)
Q Consensus       145 ~~~~~~-------~~~~~~~~~~~-~~~~Dvv~~~~~~~----~-~~--~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~  209 (488)
                      .....+       .+..+...... ..+||+||+|+...    . .+  ...+.| ++..+|+.+........     ..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~-~v~~~~d~~~~~~~~~~-----~~  152 (412)
T PRK10307         79 PSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGAR-TWLHIQDYEVDAAFGLG-----LL  152 (412)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCC-EEEEeccCCHHHHHHhC-----Cc
Confidence            001111       11111111111 12899999986431    1 12  223456 88888886543221100     00


Q ss_pred             CCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcc-cchhhhhhhCC
Q 011355          210 PEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVA-MGKDFKKKFGI  288 (488)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~-~~~~~r~~~~i  288 (488)
                      .. .....+...+     +...++++|.++++|+...+.+.+ ++++..++.+||||+|.+.+.+... ....+++++++
T Consensus       153 ~~-~~~~~~~~~~-----~~~~~~~ad~ii~~S~~~~~~~~~-~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~  225 (412)
T PRK10307        153 KG-GKVARLATAF-----ERSLLRRFDNVSTISRSMMNKARE-KGVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGL  225 (412)
T ss_pred             cC-cHHHHHHHHH-----HHHHHhhCCEEEecCHHHHHHHHH-cCCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCC
Confidence            11 1111222222     224578999999999999999987 6888889999999999887765432 23467888998


Q ss_pred             CCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh----C-CcEEEeCccCHHHHHH
Q 011355          289 PENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL----G-TNVIVLGPLDQTRLAM  363 (488)
Q Consensus       289 ~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l----~-~~V~~~g~v~~~~l~~  363 (488)
                      ++++ ++++|+|++.+.||++.+++|++.+. +.    ++++|+|+|+|+..+.++++    + ++|.|+|+++.+++.+
T Consensus       226 ~~~~-~~i~~~G~l~~~kg~~~li~a~~~l~-~~----~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~  299 (412)
T PRK10307        226 PDGK-KIVLYSGNIGEKQGLELVIDAARRLR-DR----PDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPA  299 (412)
T ss_pred             CCCC-EEEEEcCccccccCHHHHHHHHHHhc-cC----CCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHH
Confidence            8776 88999999999999999999999874 45    78999999999887766542    1 4799999999999999


Q ss_pred             HHHhcCEEEeCCCCCCC----CChHHHHHHHcCCcEEEeCCCCcc-cceeecCCceeEeCC-CHHHHHHHHHHHHhcCHH
Q 011355          364 FYNAIDIFVNPTLRAQG----LDHTVLEAMLSGKPLMATRLASIV-GSVIVGTDMGYLFSP-QVESVKKALYGIWADGRE  437 (488)
Q Consensus       364 ~~~~adv~v~ps~~~eg----~~~~~lEAma~G~PVI~~~~~~~~-~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~  437 (488)
                      +|++||++++||.. |+    +|.+++|||+||+|||+++.+|.. .+++.  ++|+++++ |+++++++|.+++++ ++
T Consensus       300 ~~~~aDi~v~ps~~-e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~-~~  375 (412)
T PRK10307        300 LLKMADCHLLPQKA-GAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQ-AL  375 (412)
T ss_pred             HHHhcCEeEEeecc-CcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhC-HH
Confidence            99999999999974 77    688899999999999999987631 25555  68999998 999999999999998 89


Q ss_pred             HHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhc
Q 011355          438 VLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       438 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~  472 (488)
                      .+++|+++++++++++|||+.++++|.++|++++.
T Consensus       376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~  410 (412)
T PRK10307        376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLVA  410 (412)
T ss_pred             HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999876

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2e-43  Score=346.44  Aligned_cols=354  Identities=20%  Similarity=0.242  Sum_probs=264.2

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC---CCCceEEEecCCCC-ccCcchhHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT---YPISSLYFHLSKPT-AAGYLDQSIVWQ  153 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~---~~~~~i~~~~~~~~-~~~~~~~~~~~~  153 (488)
                      ||++++..|+|  ..||.++++..++++|.++||+|+|++...+......   .+.+...++..... ..........+.
T Consensus         1 kI~~v~~~~~p--~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~   78 (398)
T cd03796           1 RICMVSDFFYP--NLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFP   78 (398)
T ss_pred             CeeEEeecccc--ccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHH
Confidence            79999988876  6899999999999999999999999997643322111   12222222211110 001112222333


Q ss_pred             HHHHHhcCCCCCcEEEeCCcch-------HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHH
Q 011355          154 QLQTQNSTGKPFDVIHTESVGL-------RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVV  226 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~~~~-------~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      .+....... +||+||+|+...       ......++| ++.+.|+.....   +.            .........+  
T Consensus        79 ~l~~~~~~~-~~DiIh~~~~~~~~~~~~~~~~~~~~~~-~v~t~h~~~~~~---~~------------~~~~~~~~~~--  139 (398)
T cd03796          79 LLRNILIRE-RITIVHGHQAFSALAHEALLHARTMGLK-TVFTDHSLFGFA---DA------------SSIHTNKLLR--  139 (398)
T ss_pred             HHHHHHHhc-CCCEEEECCCCchHHHHHHHHhhhcCCc-EEEEeccccccc---ch------------hhHHhhHHHH--
Confidence            343343333 899999997421       112223457 889999853210   00            0111111111  


Q ss_pred             HHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecccc
Q 011355          227 EEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK  306 (488)
Q Consensus       227 ~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~K  306 (488)
                         ..++++|.++++|+...+.+....+++.+++.+||||+|.+.|.+....         .++++ ++++++||+.+.|
T Consensus       140 ---~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~---------~~~~~-~~i~~~grl~~~K  206 (398)
T cd03796         140 ---FSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK---------RDNDK-ITIVVISRLVYRK  206 (398)
T ss_pred             ---HhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc---------CCCCc-eEEEEEeccchhc
Confidence               3468899999999999987655567788899999999998877654321         12344 8999999999999


Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCC
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQG  380 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg  380 (488)
                      |++.+++|+..+.++.    ++++|+|+|+|+..+.+++      +.++|.|+|+++.+++..+|+.||++++||. .|+
T Consensus       207 g~~~li~a~~~l~~~~----~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~-~E~  281 (398)
T cd03796         207 GIDLLVGIIPEICKKH----PNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSL-TEA  281 (398)
T ss_pred             CHHHHHHHHHHHHhhC----CCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCCh-hhc
Confidence            9999999999998888    8999999999987665554      3478999999999999999999999999997 599


Q ss_pred             CChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHH
Q 011355          381 LDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMA  460 (488)
Q Consensus       381 ~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~  460 (488)
                      ||++++|||+||+|||+++.++.+ |++.++. ++++++|.++++++|.+++++ ......+++++++.+.++|||++++
T Consensus       282 ~g~~~~EAma~G~PVI~s~~gg~~-e~i~~~~-~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~~~~fs~~~~~  358 (398)
T cd03796         282 FCIAIVEAASCGLLVVSTRVGGIP-EVLPPDM-ILLAEPDVESIVRKLEEAISI-LRTGKHDPWSFHNRVKKMYSWEDVA  358 (398)
T ss_pred             cCHHHHHHHHcCCCEEECCCCCch-hheeCCc-eeecCCCHHHHHHHHHHHHhC-hhhhhhHHHHHHHHHHhhCCHHHHH
Confidence            999999999999999999999998 8877654 455545999999999999998 6666678899999999999999999


Q ss_pred             HHHHHHHHHhhcc
Q 011355          461 AAYERLFLCISND  473 (488)
Q Consensus       461 ~~~~~~~~~~~~~  473 (488)
                      +++.++|++++++
T Consensus       359 ~~~~~~y~~l~~~  371 (398)
T cd03796         359 KRTEKVYDRILQT  371 (398)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999998874

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=4.4e-43  Score=342.26  Aligned_cols=350  Identities=20%  Similarity=0.260  Sum_probs=261.4

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC-----C-CceEEEecCCCC---------
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTY-----P-ISSLYFHLSKPT---------  141 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-----~-~~~i~~~~~~~~---------  141 (488)
                      |||+++...||..     .|+++.+-+.+|.++||+|++++...........     . ...+.+......         
T Consensus         1 m~ia~~~~~~P~~-----setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (406)
T PRK15427          1 MKVGFFLLKFPLS-----SETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHR   75 (406)
T ss_pred             CeEEEEeccCCcc-----chhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhh
Confidence            8999999998753     3899999999999999999999987654322111     1 011111100000         


Q ss_pred             -------c--------cCcchhHHHHHHH-----HHHhcCCCCCcEEEeCCcchH---Hhhhc----cCCcEEEeeeCCc
Q 011355          142 -------A--------AGYLDQSIVWQQL-----QTQNSTGKPFDVIHTESVGLR---HTRAR----NLTNVVVSWHGIA  194 (488)
Q Consensus       142 -------~--------~~~~~~~~~~~~~-----~~~~~~~~~~Dvv~~~~~~~~---~~~~~----~~p~~v~~~h~~~  194 (488)
                             .        ............+     .....+..+||+||+|.....   ..++.    ..+ .+.+.|+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~-~~~t~Hg~d  154 (406)
T PRK15427         76 ASQTLRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGK-IATIFHGID  154 (406)
T ss_pred             hhhHhhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCC-eEEEEcccc
Confidence                   0        0000000000000     011112228999999964321   11211    224 788999853


Q ss_pred             chhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCC
Q 011355          195 YETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP  274 (488)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~  274 (488)
                      ...  ....            .. +..   ...  ..++++|.++++|+..++.+.+ +|++.+++.++|||+|.+.|.+
T Consensus       155 ~~~--~~~~------------~~-~~~---~~~--~~~~~ad~vv~~S~~~~~~l~~-~g~~~~ki~vi~nGvd~~~f~~  213 (406)
T PRK15427        155 ISS--REVL------------NH-YTP---EYQ--QLFRRGDLMLPISDLWAGRLQK-MGCPPEKIAVSRMGVDMTRFSP  213 (406)
T ss_pred             ccc--chhh------------hh-hhH---HHH--HHHHhCCEEEECCHHHHHHHHH-cCCCHHHEEEcCCCCCHHHcCC
Confidence            211  0000            00 000   111  3467899999999999999987 6888899999999999988765


Q ss_pred             CcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCC
Q 011355          275 DVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGT  348 (488)
Q Consensus       275 ~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~  348 (488)
                      ....          ..++++.++++||+.+.||++.+++|++.+.+++    ++++++|+|+|+..+.+++      +.+
T Consensus       214 ~~~~----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~----~~~~l~ivG~G~~~~~l~~~~~~~~l~~  279 (406)
T PRK15427        214 RPVK----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQG----VAFRYRILGIGPWERRLRTLIEQYQLED  279 (406)
T ss_pred             Cccc----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhC----CCEEEEEEECchhHHHHHHHHHHcCCCC
Confidence            3221          1223378999999999999999999999998888    8999999999998776654      347


Q ss_pred             cEEEeCccCHHHHHHHHHhcCEEEeCCCC-----CCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHH
Q 011355          349 NVIVLGPLDQTRLAMFYNAIDIFVNPTLR-----AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVE  422 (488)
Q Consensus       349 ~V~~~g~v~~~~l~~~~~~adv~v~ps~~-----~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~  422 (488)
                      +|.|+|+++++++.++|+.||++|+||..     .||+|++++|||+||+|||+|+.+|++ |++.++.+|+++++ |++
T Consensus       280 ~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~-E~v~~~~~G~lv~~~d~~  358 (406)
T PRK15427        280 VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIP-ELVEADKSGWLVPENDAQ  358 (406)
T ss_pred             eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCch-hhhcCCCceEEeCCCCHH
Confidence            89999999999999999999999999963     299999999999999999999999998 99999999999999 999


Q ss_pred             HHHHHHHHHHh-cCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          423 SVKKALYGIWA-DGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       423 ~la~~i~~ll~-~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                      +++++|.++++ | ++.+++|++++++.+.++|+|+.+++++.++|++
T Consensus       359 ~la~ai~~l~~~d-~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~  405 (406)
T PRK15427        359 ALAQRLAAFSQLD-TDELAPVVKRAREKVETDFNQQVINRELASLLQA  405 (406)
T ss_pred             HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence            99999999999 7 8999999999999999999999999999999976

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=4.9e-43  Score=341.81  Aligned_cols=361  Identities=23%  Similarity=0.297  Sum_probs=262.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      .||+++...+    ..||+++++.+++++|.+.||++.+++....+.........++.+......  .... ...+..+.
T Consensus         2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~l~   74 (374)
T TIGR03088         2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQ--PGKD-VAVYPQLY   74 (374)
T ss_pred             ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEeCCC--CCCC-hHHHHHHH
Confidence            4899998844    679999999999999999999999998654332111111112222221111  1111 11222333


Q ss_pred             HHhcCCCCCcEEEeCCcchH--Hhh--hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhc
Q 011355          157 TQNSTGKPFDVIHTESVGLR--HTR--ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFF  232 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~~--~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (488)
                      +..+.. +||+||+|+....  .+.  ..+.|..+++.|+......+.           .   ...+..+.+.     ..
T Consensus        75 ~~l~~~-~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-----------~---~~~~~~~~~~-----~~  134 (374)
T TIGR03088        75 RLLRQL-RPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDG-----------S---NWKYRWLRRL-----YR  134 (374)
T ss_pred             HHHHHh-CCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcccccchh-----------h---HHHHHHHHHH-----HH
Confidence            333333 8999999974321  111  123342344555432111000           0   1111122221     23


Q ss_pred             CCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHH
Q 011355          233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMF  312 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll  312 (488)
                      +.+|.++++|+...+.+.+.++++..++.+|+||+|.+.+.+........+++...++++ ++++++||+.+.||++.++
T Consensus       135 ~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~vGrl~~~Kg~~~li  213 (374)
T TIGR03088       135 PLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADES-VVVGTVGRLQAVKDQPTLV  213 (374)
T ss_pred             hcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCC-eEEEEEecCCcccCHHHHH
Confidence            467899999999999999878888899999999999988765543333333343344444 8999999999999999999


Q ss_pred             HHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHH
Q 011355          313 EALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVL  386 (488)
Q Consensus       313 ~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~l  386 (488)
                      +|+..+.++.++..++++|+++|+|+..+.+++      +.++|.|.|.  .+|+.++|+.||++|+||. .||||++++
T Consensus       214 ~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~-~Eg~~~~~l  290 (374)
T TIGR03088       214 RAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGE--RDDVPALMQALDLFVLPSL-AEGISNTIL  290 (374)
T ss_pred             HHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCC--cCCHHHHHHhcCEEEeccc-cccCchHHH
Confidence            999999877621113799999999987666554      3467999997  5699999999999999997 599999999


Q ss_pred             HHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 011355          387 EAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYER  465 (488)
Q Consensus       387 EAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~  465 (488)
                      |||+||+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+..+++++++++.++|||+.++++|.+
T Consensus       291 EAma~G~Pvv~s~~~g~~-e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~  368 (374)
T TIGR03088       291 EAMASGLPVIATAVGGNP-ELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAG  368 (374)
T ss_pred             HHHHcCCCEEEcCCCCcH-HHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            999999999999999998 89999999999998 999999999999998 899999999999999999999999999999


Q ss_pred             HHHHh
Q 011355          466 LFLCI  470 (488)
Q Consensus       466 ~~~~~  470 (488)
                      +|+++
T Consensus       369 ~y~~~  373 (374)
T TIGR03088       369 LYDQL  373 (374)
T ss_pred             HHHHh
Confidence            99876

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=7.8e-43  Score=347.29  Aligned_cols=380  Identities=20%  Similarity=0.289  Sum_probs=263.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC------------------CCCceEEEecC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT------------------YPISSLYFHLS  138 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~------------------~~~~~i~~~~~  138 (488)
                      |||++++..+.|....||.+.++..|+++|+++||+|.|+++.........                  ....++.+...
T Consensus         1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v   80 (466)
T PRK00654          1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI   80 (466)
T ss_pred             CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence            899999998766667999999999999999999999999998754321110                  01122222211


Q ss_pred             -------CCCccCcchhHH---HH-HHHHHHh-cCCCCCcEEEeCCcc---hHHhhh-------ccCCcEEEeeeCCcch
Q 011355          139 -------KPTAAGYLDQSI---VW-QQLQTQN-STGKPFDVIHTESVG---LRHTRA-------RNLTNVVVSWHGIAYE  196 (488)
Q Consensus       139 -------~~~~~~~~~~~~---~~-~~~~~~~-~~~~~~Dvv~~~~~~---~~~~~~-------~~~p~~v~~~h~~~~~  196 (488)
                             ++...+..+...   .+ ....... ....+|||||+|++.   ++.+++       .++| ++.++|+..+.
T Consensus        81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~-~v~TiH~~~~~  159 (466)
T PRK00654         81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIK-TVFTIHNLAYQ  159 (466)
T ss_pred             eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCC-EEEEcCCCcCC
Confidence                   111111111100   01 1111111 112289999999732   222222       1457 99999997653


Q ss_pred             hhhh-hhhHhhhcCCCChhH-HHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH---------hcCCCCcEEEecC
Q 011355          197 TIHS-DIIQELLRTPEEPQA-YALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI---------YMIPEERVHVILN  265 (488)
Q Consensus       197 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---------~g~~~~~i~vi~n  265 (488)
                      .... +.... ...+...+. ..+. ...........+..+|.++++|+..++.+...         ++.+.+++.+|+|
T Consensus       160 g~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~N  237 (466)
T PRK00654        160 GLFPAEILGE-LGLPAEAFHLEGLE-FYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILN  237 (466)
T ss_pred             CcCCHHHHHH-cCCChHHcCchhhh-cCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecC
Confidence            2111 01110 000000000 0000 00000001134578999999999999888642         2345679999999


Q ss_pred             CccCCCcCCCcc-----------------cchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCC
Q 011355          266 GVDEEVFKPDVA-----------------MGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRS  328 (488)
Q Consensus       266 gvd~~~~~~~~~-----------------~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~  328 (488)
                      |+|.+.+.+...                 .+..+++++|+++++.++++++||+.++||++.+++|++++.+      .+
T Consensus       238 Gid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~------~~  311 (466)
T PRK00654        238 GIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE------QG  311 (466)
T ss_pred             CCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh------cC
Confidence            999998876432                 1356889999986444889999999999999999999999875      46


Q ss_pred             eEEEEEeCCCc--hhHHhh----hCCcEEE-eCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCC
Q 011355          329 TVFLVAGDGPW--GARYRD----LGTNVIV-LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLA  401 (488)
Q Consensus       329 ~~l~ivG~g~~--~~~~~~----l~~~V~~-~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~  401 (488)
                      ++|+|+|+|+.  .+.+++    +..++.+ .|+ +.+.+..+|+.||++|+||.+ |+||++++|||+||+|+|+++.|
T Consensus       312 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~-E~~gl~~lEAma~G~p~V~~~~g  389 (466)
T PRK00654        312 GQLVLLGTGDPELEEAFRALAARYPGKVGVQIGY-DEALAHRIYAGADMFLMPSRF-EPCGLTQLYALRYGTLPIVRRTG  389 (466)
T ss_pred             CEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC-CHHHHHHHHhhCCEEEeCCCC-CCchHHHHHHHHCCCCEEEeCCC
Confidence            89999998863  234443    4456765 555 556678999999999999985 99999999999999999999999


Q ss_pred             CcccceeecC------CceeEeCC-CHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Q 011355          402 SIVGSVIVGT------DMGYLFSP-QVESVKKALYGIWA---DGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       402 ~~~~e~v~~~------~~g~l~~~-d~~~la~~i~~ll~---~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                      |+. |.+.++      .+|+++++ |+++++++|.++++   + ++.+.+|++++.   .++|||+.++++|.++|++++
T Consensus       390 G~~-e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~-~~~~~~~~~~~~---~~~fsw~~~a~~~~~lY~~~~  464 (466)
T PRK00654        390 GLA-DTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQ-PPLWRALQRQAM---AQDFSWDKSAEEYLELYRRLL  464 (466)
T ss_pred             Ccc-ceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHh---ccCCChHHHHHHHHHHHHHHh
Confidence            998 888887      89999999 99999999999886   5 666888888775   367999999999999999876


Q ss_pred             c
Q 011355          472 N  472 (488)
Q Consensus       472 ~  472 (488)
                      +
T Consensus       465 ~  465 (466)
T PRK00654        465 G  465 (466)
T ss_pred             h
Confidence            5

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=2.4e-42  Score=340.58  Aligned_cols=357  Identities=20%  Similarity=0.264  Sum_probs=263.1

Q ss_pred             CCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-CCCceEEEecCCCC-ccC--cchhHH-----HHHHHHHHhc-C
Q 011355           92 AGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-YPISSLYFHLSKPT-AAG--YLDQSI-----VWQQLQTQNS-T  161 (488)
Q Consensus        92 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~i~~~~~~~~-~~~--~~~~~~-----~~~~~~~~~~-~  161 (488)
                      .||+++++.+|+++|.++||+|+|+|.......... ....++.+...... ..+  ......     .+..+..... .
T Consensus        19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (405)
T TIGR03449        19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHE   98 (405)
T ss_pred             CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence            699999999999999999999999998643222111 11233333322110 001  111111     1111212111 1


Q ss_pred             CCCCcEEEeCCcc--hHH---hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCcc
Q 011355          162 GKPFDVIHTESVG--LRH---TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYA  236 (488)
Q Consensus       162 ~~~~Dvv~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (488)
                      ..+||+||+|...  ...   ....++| ++.++|+.....  ..    .......+. .......     +...++++|
T Consensus        99 ~~~~Diih~h~~~~~~~~~~~~~~~~~p-~v~t~h~~~~~~--~~----~~~~~~~~~-~~~~~~~-----e~~~~~~~d  165 (405)
T TIGR03449        99 PGYYDLIHSHYWLSGQVGWLLRDRWGVP-LVHTAHTLAAVK--NA----ALADGDTPE-PEARRIG-----EQQLVDNAD  165 (405)
T ss_pred             CCCCCeEEechHHHHHHHHHHHHhcCCC-EEEeccchHHHH--HH----hccCCCCCc-hHHHHHH-----HHHHHHhcC
Confidence            2279999999732  111   2234567 999999864211  00    000000000 0111111     124567899


Q ss_pred             EEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHH
Q 011355          237 HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK  316 (488)
Q Consensus       237 ~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~  316 (488)
                      .++++|+...+.+.+.++.+.+++.+||||+|.+.+.+.  .....++++++++++ ++|+++|++.+.||++.+++|++
T Consensus       166 ~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~--~~~~~~~~~~~~~~~-~~i~~~G~l~~~K~~~~li~a~~  242 (405)
T TIGR03449       166 RLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPG--DRATERARLGLPLDT-KVVAFVGRIQPLKAPDVLLRAVA  242 (405)
T ss_pred             eEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCC--cHHHHHHhcCCCCCC-cEEEEecCCCcccCHHHHHHHHH
Confidence            999999999998888788888899999999999877654  235678888887766 78899999999999999999999


Q ss_pred             HhHhhccCCCCC--eEEEEEeC----C-CchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCCh
Q 011355          317 QLLAENDTFRRS--TVFLVAGD----G-PWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDH  383 (488)
Q Consensus       317 ~l~~~~~~~~~~--~~l~ivG~----g-~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~  383 (488)
                      .+.++.    ++  ++|+|+|+    | +..+.+++      +.++|.|+|+++.+++.++|+.||++++||. .||||+
T Consensus       243 ~l~~~~----~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~-~E~~g~  317 (405)
T TIGR03449       243 ELLDRD----PDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSY-NESFGL  317 (405)
T ss_pred             HHHhhC----CCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCC-CCCcCh
Confidence            998877    66  99999995    2 23333433      3478999999999999999999999999997 599999


Q ss_pred             HHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHH
Q 011355          384 TVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAA  462 (488)
Q Consensus       384 ~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~  462 (488)
                      +++|||++|+|||+++.|+.. |++.++.+|+++++ |+++++++|.+++++ ++.+++|++++++.+ ++|||++++++
T Consensus       318 ~~lEAma~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~~~~~~~-~~fsw~~~~~~  394 (405)
T TIGR03449       318 VAMEAQACGTPVVAARVGGLP-VAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGAAAVEHA-AGFSWAATADG  394 (405)
T ss_pred             HHHHHHHcCCCEEEecCCCcH-hhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH-HhCCHHHHHHH
Confidence            999999999999999999988 88999999999998 999999999999998 899999999999987 56999999999


Q ss_pred             HHHHHHHhhc
Q 011355          463 YERLFLCISN  472 (488)
Q Consensus       463 ~~~~~~~~~~  472 (488)
                      +.++|++++.
T Consensus       395 ~~~~y~~~~~  404 (405)
T TIGR03449       395 LLSSYRDALA  404 (405)
T ss_pred             HHHHHHHHhh
Confidence            9999998753

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=1.9e-42  Score=342.52  Aligned_cols=365  Identities=18%  Similarity=0.181  Sum_probs=246.5

Q ss_pred             CCCCcHHHHHHHHHHHHHHCCC--eEEEEecCCCCC----CC---C---CCCCceEEEecCCCCccC---cchh-HHHHH
Q 011355           90 SHAGGLERHALTLHLALAKRGH--ELHIFTASCLNC----SF---P---TYPISSLYFHLSKPTAAG---YLDQ-SIVWQ  153 (488)
Q Consensus        90 ~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~----~~---~---~~~~~~i~~~~~~~~~~~---~~~~-~~~~~  153 (488)
                      +..||+++++.+|+++|+++||  +|+|+|......    ..   .   ..+++.+.+.........   .+.+ .....
T Consensus        23 p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~~  102 (439)
T TIGR02472        23 ADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGPRRYLRKELLWPYLDELAD  102 (439)
T ss_pred             CCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHHHH
Confidence            4679999999999999999997  999999653221    11   0   122222223221110000   0111 11112


Q ss_pred             HHHHHhcC-CCCCcEEEeCCcc--hHH---hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCCh-hHHHHHHHHHHHH
Q 011355          154 QLQTQNST-GKPFDVIHTESVG--LRH---TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEP-QAYALAERASKVV  226 (488)
Q Consensus       154 ~~~~~~~~-~~~~Dvv~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  226 (488)
                      .+.....+ ..+|||||+|+..  +..   ....++| ++.+.|+...... .    ......... .....+....+..
T Consensus       103 ~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p-~V~t~H~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~  176 (439)
T TIGR02472       103 NLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVP-LIFTGHSLGREKR-R----RLLAAGLKPQQIEKQYNISRRIE  176 (439)
T ss_pred             HHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCC-EEEecccccchhh-h----hcccCCCChhhhhhhcchHHHHH
Confidence            22222222 1269999999732  111   1223568 9999998532210 0    000000000 0011111111112


Q ss_pred             HHhhhcCCccEEEEcChhhHH-HHHHHhcCCCCcEEEecCCccCCCcCCCccc--chhh---hhhhCCCCCCcEEEEEEe
Q 011355          227 EEVKFFPKYAHHVATSDHCGD-VLKRIYMIPEERVHVILNGVDEEVFKPDVAM--GKDF---KKKFGIPENRSLVLGMAG  300 (488)
Q Consensus       227 ~~~~~~~~~d~ii~~S~~~~~-~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~--~~~~---r~~~~i~~~~~~~i~~~G  300 (488)
                      .+...++.+|.++++|+.... .+....+++++++.+||||+|.+.|.+....  ....   +++++.++++ ++++++|
T Consensus       177 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~vG  255 (439)
T TIGR02472       177 AEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEK-PPILAIS  255 (439)
T ss_pred             HHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCC-cEEEEEc
Confidence            233567899999999876433 3444336788999999999999888654321  1112   2334455555 6888999


Q ss_pred             eeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhH-----------Hh----h--hCCcEEEeCccCHHHHHH
Q 011355          301 RLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGAR-----------YR----D--LGTNVIVLGPLDQTRLAM  363 (488)
Q Consensus       301 rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~-----------~~----~--l~~~V~~~g~v~~~~l~~  363 (488)
                      |+.+.||++.+++|++.+.+....  +++. +++|+|+..+.           +.    +  +.++|+|+|+++.+++.+
T Consensus       256 rl~~~Kg~~~li~A~~~l~~~~~~--~~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~  332 (439)
T TIGR02472       256 RPDRRKNIPSLVEAYGRSPKLQEM--ANLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPE  332 (439)
T ss_pred             CCcccCCHHHHHHHHHhChhhhhh--ccEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHH
Confidence            999999999999999865322100  3333 36787764321           11    1  457899999999999999


Q ss_pred             HHHhc----CEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHH
Q 011355          364 FYNAI----DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREV  438 (488)
Q Consensus       364 ~~~~a----dv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~  438 (488)
                      +|+.|    |++|+||. .|+||++++|||+||+|||+|+.||.+ |++.++.+|+++++ |+++++++|.+++++ ++.
T Consensus       333 ~~~~a~~~~Dv~v~pS~-~E~fg~~~lEAma~G~PvV~s~~gg~~-eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~  409 (439)
T TIGR02472       333 LYRLAARSRGIFVNPAL-TEPFGLTLLEAAACGLPIVATDDGGPR-DIIANCRNGLLVDVLDLEAIASALEDALSD-SSQ  409 (439)
T ss_pred             HHHHHhhcCCEEecccc-cCCcccHHHHHHHhCCCEEEeCCCCcH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHH
Confidence            99987    99999997 599999999999999999999999998 89999999999999 999999999999999 899


Q ss_pred             HHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          439 LEKKGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       439 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                      +++|++++++++.++|||+.++++|.+++
T Consensus       410 ~~~~~~~a~~~~~~~fsw~~~~~~~~~l~  438 (439)
T TIGR02472       410 WQLWSRNGIEGVRRHYSWDAHVEKYLRIL  438 (439)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            99999999999999999999999999886

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=3.5e-41  Score=340.60  Aligned_cols=389  Identities=17%  Similarity=0.200  Sum_probs=274.1

Q ss_pred             CCCCCCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--------------C-------
Q 011355           70 SNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--------------Y-------  128 (488)
Q Consensus        70 ~~~~~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--------------~-------  128 (488)
                      ..+..++|||++|+....|....||...++..|.++|++.||+|.|+++.........              .       
T Consensus       475 ~~~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~  554 (977)
T PLN02939        475 LSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKN  554 (977)
T ss_pred             cCCCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEE
Confidence            4444578999999998877778999999999999999999999999999765332000              0       


Q ss_pred             -----CCceEEEecCC----------CCccCcchhHHHH----HHHHHHhc-CCCCCcEEEeCCcc--h--HHhhh----
Q 011355          129 -----PISSLYFHLSK----------PTAAGYLDQSIVW----QQLQTQNS-TGKPFDVIHTESVG--L--RHTRA----  180 (488)
Q Consensus       129 -----~~~~i~~~~~~----------~~~~~~~~~~~~~----~~~~~~~~-~~~~~Dvv~~~~~~--~--~~~~~----  180 (488)
                           ..+++.+.+..          +..++..+....+    +....... ...+|||||+|.+.  +  +.+..    
T Consensus       555 ~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~  634 (977)
T PLN02939        555 KIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAP  634 (977)
T ss_pred             EEEEEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhh
Confidence                 00112222111          1111111111111    11112221 12389999999753  2  22221    


Q ss_pred             ---ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhH--HHH----HHHHHHHHHHhhhcCCccEEEEcChhhHHHHHH
Q 011355          181 ---RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQA--YAL----AERASKVVEEVKFFPKYAHHVATSDHCGDVLKR  251 (488)
Q Consensus       181 ---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~  251 (488)
                         ...+ ++.++|+..+......-.......+...+.  ..+    ...+.-+.   ..+-.+|.|+++|+..++.+..
T Consensus       635 ~~~~~~k-tVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK---~GIv~AD~VtTVSptYA~EI~t  710 (977)
T PLN02939        635 KGFNSAR-ICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVK---GAIVYSNIVTTVSPTYAQEVRS  710 (977)
T ss_pred             ccCCCCc-EEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHH---HHHHhCCeeEeeeHHHHHHHHH
Confidence               2245 999999997754322111011111111000  011    11111111   2234689999999999998875


Q ss_pred             H--------hcCCCCcEEEecCCccCCCcCCCcc-----------------cchhhhhhhCCCCC--CcEEEEEEeeecc
Q 011355          252 I--------YMIPEERVHVILNGVDEEVFKPDVA-----------------MGKDFKKKFGIPEN--RSLVLGMAGRLVK  304 (488)
Q Consensus       252 ~--------~g~~~~~i~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~--~~~~i~~~Grl~~  304 (488)
                      .        ++....++.+|+||||.+.+.+...                 .+..+++++|++.+  +.++|+++||+.+
T Consensus       711 e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~  790 (977)
T PLN02939        711 EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVP  790 (977)
T ss_pred             HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCc
Confidence            3        2346789999999999998877543                 24678999999853  3378999999999


Q ss_pred             ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch---hHHhh----h--CCcEEEeCccCHHHHHHHHHhcCEEEeCC
Q 011355          305 DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG---ARYRD----L--GTNVIVLGPLDQTRLAMFYNAIDIFVNPT  375 (488)
Q Consensus       305 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~---~~~~~----l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps  375 (488)
                      +||++.+++|+..+..      ++++|+|+|+|+..   +.+++    +  .++|.|+|..+.+....+|+.||+||+||
T Consensus       791 QKGiDlLleA~~~Ll~------~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPS  864 (977)
T PLN02939        791 QKGVHLIRHAIYKTAE------LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPS  864 (977)
T ss_pred             ccChHHHHHHHHHHhh------cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECC
Confidence            9999999999988864      57899999999753   33333    2  36899999988777889999999999999


Q ss_pred             CCCCCCChHHHHHHHcCCcEEEeCCCCcccceeec---------CCceeEeCC-CHHHHHHHHHHHHh---cCHHHHHHH
Q 011355          376 LRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG---------TDMGYLFSP-QVESVKKALYGIWA---DGREVLEKK  442 (488)
Q Consensus       376 ~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~---------~~~g~l~~~-d~~~la~~i~~ll~---~~~~~~~~~  442 (488)
                      .+ |+||++++|||+||+|+|++++||.. +.|.+         +.+|+++++ |+++++++|.+++.   ++++.+.+|
T Consensus       865 r~-EPfGLvqLEAMAyGtPPVVs~vGGL~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L  942 (977)
T PLN02939        865 MF-EPCGLTQMIAMRYGSVPIVRKTGGLN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQL  942 (977)
T ss_pred             Cc-cCCcHHHHHHHHCCCCEEEecCCCCc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence            85 99999999999999999999999998 77765         578999999 99999999998875   238899999


Q ss_pred             HHHHHHHHhhhCCHHHHHHHHHHHHHHhhcc
Q 011355          443 GLVARKRGLNLFTATKMAAAYERLFLCISND  473 (488)
Q Consensus       443 ~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~  473 (488)
                      ++++.   .+.|||+.++++|.++|+++++.
T Consensus       943 ~~~am---~~dFSWe~~A~qYeeLY~~ll~~  970 (977)
T PLN02939        943 VQKDM---NIDFSWDSSASQYEELYQRAVAR  970 (977)
T ss_pred             HHHHH---HhcCCHHHHHHHHHHHHHHHHHh
Confidence            88764   36799999999999999998763

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=2.5e-41  Score=328.17  Aligned_cols=344  Identities=18%  Similarity=0.224  Sum_probs=258.0

Q ss_pred             EEEEEe-cCCC-CCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCc--eEEEe-cCCCCc--------cC
Q 011355           78 KIALFV-KKWP-HRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPIS--SLYFH-LSKPTA--------AG  144 (488)
Q Consensus        78 kIl~i~-~~~p-~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~--~i~~~-~~~~~~--------~~  144 (488)
                      ||++++ +.+| |+...||+|+++..+++.|.   ++|++++....+.........  .++.. ......        ..
T Consensus         4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (380)
T PRK15484          4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTS---IPNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRLD   80 (380)
T ss_pred             eEEEEeccCCCCCCccccHHHHHHHHhhhhcc---CCeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhccC
Confidence            676665 4554 23478999999999999994   399999998865332222221  22222 111000        00


Q ss_pred             cchhHHHHHHHHHHhcCCCCCcEEEeCCcch-HHhhhc---cCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHH
Q 011355          145 YLDQSIVWQQLQTQNSTGKPFDVIHTESVGL-RHTRAR---NLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAE  220 (488)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~-~~~~~~---~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (488)
                      ...+......+....... ++|+||+|+... ...+..   +.+ ++.++|+.+.                    .    
T Consensus        81 ~~~~~~~~~~~~~~~~~~-~~~vi~v~~~~~~~~~~~~~~~~~~-~v~~~h~~~~--------------------~----  134 (380)
T PRK15484         81 PLPYSQRILNIAHKFTIT-KDSVIVIHNSMKLYRQIRERAPQAK-LVMHMHNAFE--------------------P----  134 (380)
T ss_pred             chhHHHHHHHHHHhcCCC-CCcEEEEeCcHHhHHHHHhhCCCCC-EEEEEecccC--------------------h----
Confidence            112222222222222222 799999997432 221222   224 8888997311                    0    


Q ss_pred             HHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEe
Q 011355          221 RASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG  300 (488)
Q Consensus       221 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  300 (488)
                               ..+.+++.++++|++.++.+.+.+  +..++.+||||+|.+.+.+..  ...+++++++++++ .+++++|
T Consensus       135 ---------~~~~~~~~ii~~S~~~~~~~~~~~--~~~~i~vIpngvd~~~~~~~~--~~~~~~~~~~~~~~-~~il~~G  200 (380)
T PRK15484        135 ---------ELLDKNAKIIVPSQFLKKFYEERL--PNADISIVPNGFCLETYQSNP--QPNLRQQLNISPDE-TVLLYAG  200 (380)
T ss_pred             ---------hHhccCCEEEEcCHHHHHHHHhhC--CCCCEEEecCCCCHHHcCCcc--hHHHHHHhCCCCCC-eEEEEec
Confidence                     112467899999999999988743  567899999999988776533  24567888887776 7889999


Q ss_pred             eeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch---------hHHh----hhCCcEEEeCccCHHHHHHHHHh
Q 011355          301 RLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG---------ARYR----DLGTNVIVLGPLDQTRLAMFYNA  367 (488)
Q Consensus       301 rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~---------~~~~----~l~~~V~~~g~v~~~~l~~~~~~  367 (488)
                      |+.+.||++.+++|+..+.+++    |+++|+|+|+|+..         +.++    +++.+|.|+|+++.+++.++|+.
T Consensus       201 rl~~~Kg~~~Li~A~~~l~~~~----p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~  276 (380)
T PRK15484        201 RISPDKGILLLMQAFEKLATAH----SNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPL  276 (380)
T ss_pred             cCccccCHHHHHHHHHHHHHhC----CCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHh
Confidence            9999999999999999999888    99999999987532         1222    34578999999999999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCcee-EeCC-CHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGY-LFSP-QVESVKKALYGIWADGREVLEKKGLV  445 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~-l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~  445 (488)
                      ||++|+||.+.|+||++++|||+||+|||+++.||++ |++.++.+|+ ++++ |+++++++|.++++| ++. .+|+++
T Consensus       277 aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~-Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d-~~~-~~~~~~  353 (380)
T PRK15484        277 ADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGIT-EFVLEGITGYHLAEPMTSDSIISDINRTLAD-PEL-TQIAEQ  353 (380)
T ss_pred             CCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcH-hhcccCCceEEEeCCCCHHHHHHHHHHHHcC-HHH-HHHHHH
Confidence            9999999975699999999999999999999999998 8999999999 5567 999999999999998 764 789999


Q ss_pred             HHHHHhhhCCHHHHHHHHHHHHHHhh
Q 011355          446 ARKRGLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       446 a~~~~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                      +++.+.++|||++++++++++|++..
T Consensus       354 ar~~~~~~fsw~~~a~~~~~~l~~~~  379 (380)
T PRK15484        354 AKDFVFSKYSWEGVTQRFEEQIHNWF  379 (380)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999999998753

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=2.9e-41  Score=334.44  Aligned_cols=385  Identities=19%  Similarity=0.232  Sum_probs=266.3

Q ss_pred             CCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC---------C---C---------Cce
Q 011355           74 LKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT---------Y---P---------ISS  132 (488)
Q Consensus        74 ~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~---------~---~---------~~~  132 (488)
                      |.+|||+++++..-|....||....+..|.++|+++||+|.|+.+.........         .   +         .++
T Consensus         1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (485)
T PRK14099          1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGG   80 (485)
T ss_pred             CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCC
Confidence            367999999998777789999999999999999999999999999764331000         0   0         011


Q ss_pred             EEEec-------CCCC-ccC------cchhHHH---H-HHHHHHhc---CCCCCcEEEeCCcc---hHHhhh----ccCC
Q 011355          133 LYFHL-------SKPT-AAG------YLDQSIV---W-QQLQTQNS---TGKPFDVIHTESVG---LRHTRA----RNLT  184 (488)
Q Consensus       133 i~~~~-------~~~~-~~~------~~~~~~~---~-~~~~~~~~---~~~~~Dvv~~~~~~---~~~~~~----~~~p  184 (488)
                      +.+..       .++. .++      ..+....   | +.......   ...+|||||+|++.   ++.++.    ..+|
T Consensus        81 v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~  160 (485)
T PRK14099         81 LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPAPG  160 (485)
T ss_pred             ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCCCC
Confidence            11110       1110 110      0111111   1 11111111   12389999999842   222222    2346


Q ss_pred             cEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHh---------cC
Q 011355          185 NVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIY---------MI  255 (488)
Q Consensus       185 ~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~---------g~  255 (488)
                       .+.++|+..+..............+.....................+..+|.|+++|+..++.+.+.+         +.
T Consensus       161 -~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~  239 (485)
T PRK14099        161 -TVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQ  239 (485)
T ss_pred             -EEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHh
Confidence             99999998654322111111011110000000000000000012456789999999999999887532         12


Q ss_pred             CCCcEEEecCCccCCCcCCCccc-----------------chhhhhhhCCCCC-CcEEEEEEeeeccccChHHHHHHHHH
Q 011355          256 PEERVHVILNGVDEEVFKPDVAM-----------------GKDFKKKFGIPEN-RSLVLGMAGRLVKDKGHPLMFEALKQ  317 (488)
Q Consensus       256 ~~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~~i~~~-~~~~i~~~Grl~~~Kg~~~ll~a~~~  317 (488)
                      +.+++.+|+||+|.+.|.+....                 +..+++++|++.+ +.++++++||+.++||++.+++|+..
T Consensus       240 ~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~  319 (485)
T PRK14099        240 RADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPT  319 (485)
T ss_pred             hCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHH
Confidence            46799999999999988764331                 3568889999753 33788899999999999999999998


Q ss_pred             hHhhccCCCCCeEEEEEeCCCc--hhHHhhh----CCcE-EEeCccCHHHHHHHH-HhcCEEEeCCCCCCCCChHHHHHH
Q 011355          318 LLAENDTFRRSTVFLVAGDGPW--GARYRDL----GTNV-IVLGPLDQTRLAMFY-NAIDIFVNPTLRAQGLDHTVLEAM  389 (488)
Q Consensus       318 l~~~~~~~~~~~~l~ivG~g~~--~~~~~~l----~~~V-~~~g~v~~~~l~~~~-~~adv~v~ps~~~eg~~~~~lEAm  389 (488)
                      +.+      .+++|+|+|+|+.  .+.++++    ..++ .++|+  ++++..+| +.||++|+||. .|+||++.+|||
T Consensus       320 l~~------~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~--~~~l~~~~~a~aDifv~PS~-~E~fGl~~lEAm  390 (485)
T PRK14099        320 LLG------EGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY--DEALAHLIQAGADALLVPSR-FEPCGLTQLCAL  390 (485)
T ss_pred             HHh------cCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHHhcCCEEEECCc-cCCCcHHHHHHH
Confidence            875      4689999999863  3444443    3455 78998  77999887 57999999998 499999999999


Q ss_pred             HcCCcEEEeCCCCcccceeecC---------CceeEeCC-CHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHhhhCCH
Q 011355          390 LSGKPLMATRLASIVGSVIVGT---------DMGYLFSP-QVESVKKALYG---IWADGREVLEKKGLVARKRGLNLFTA  456 (488)
Q Consensus       390 a~G~PVI~~~~~~~~~e~v~~~---------~~g~l~~~-d~~~la~~i~~---ll~~~~~~~~~~~~~a~~~~~~~fs~  456 (488)
                      +||+|+|++++||.. |.+.++         .+|+++++ |+++++++|.+   ++++ ++.+++|+++++   .++|||
T Consensus       391 a~G~ppVvs~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~---~~~fSw  465 (485)
T PRK14099        391 RYGAVPVVARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM---TTDVSW  465 (485)
T ss_pred             HCCCCcEEeCCCCcc-ceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh---hhcCCh
Confidence            999988889999998 777765         68999999 99999999997   6667 899999999886   367999


Q ss_pred             HHHHHHHHHHHHHhhcc
Q 011355          457 TKMAAAYERLFLCISND  473 (488)
Q Consensus       457 ~~~~~~~~~~~~~~~~~  473 (488)
                      ++++++|+++|+++++.
T Consensus       466 ~~~a~~y~~lY~~l~~~  482 (485)
T PRK14099        466 RNPAQHYAALYRSLVAE  482 (485)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998763

>PLN02316 synthase/transferase

Probab=100.00  E-value=3.6e-41  Score=347.00  Aligned_cols=361  Identities=16%  Similarity=0.198  Sum_probs=263.6

Q ss_pred             CCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC----CC-----------------CCce
Q 011355           74 LKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFP----TY-----------------PISS  132 (488)
Q Consensus        74 ~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----~~-----------------~~~~  132 (488)
                      ..+|||++|+..++|....||...++..|.++|++.||+|.|+++........    ..                 ..++
T Consensus       585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G  664 (1036)
T PLN02316        585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEG  664 (1036)
T ss_pred             CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECC
Confidence            45699999999888877899999999999999999999999999986532110    00                 0011


Q ss_pred             EEEecCCCC--c------cCcchhHH----HHHHHHHH-hcCCCCCcEEEeCCc--ch-HHhhh--------ccCCcEEE
Q 011355          133 LYFHLSKPT--A------AGYLDQSI----VWQQLQTQ-NSTGKPFDVIHTESV--GL-RHTRA--------RNLTNVVV  188 (488)
Q Consensus       133 i~~~~~~~~--~------~~~~~~~~----~~~~~~~~-~~~~~~~Dvv~~~~~--~~-~~~~~--------~~~p~~v~  188 (488)
                      +.+....+.  .      ++..+...    .-+..... .....+|||||+|+.  ++ +.++.        .++| ++.
T Consensus       665 V~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p-~V~  743 (1036)
T PLN02316        665 LSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKAR-VVF  743 (1036)
T ss_pred             cEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCC-EEE
Confidence            111111110  1      11011111    11111111 112238999999974  22 22221        2356 999


Q ss_pred             eeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCC--CCcEEEecCC
Q 011355          189 SWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIP--EERVHVILNG  266 (488)
Q Consensus       189 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~--~~~i~vi~ng  266 (488)
                      ++|+..+..                   ...+         ..+..+|.|+++|+..++.+...+.+.  ..++.+|+||
T Consensus       744 TiHnl~~~~-------------------n~lk---------~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NG  795 (1036)
T PLN02316        744 TIHNLEFGA-------------------NHIG---------KAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILNG  795 (1036)
T ss_pred             EeCCcccch-------------------hHHH---------HHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEECC
Confidence            999853210                   0000         234679999999999999988744443  4799999999


Q ss_pred             ccCCCcCCCcc------------------cchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCC
Q 011355          267 VDEEVFKPDVA------------------MGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRS  328 (488)
Q Consensus       267 vd~~~~~~~~~------------------~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~  328 (488)
                      ||.+.+.+...                  .+..+++++|++..+.++++++||+.++||++.|++|+..+.+      .+
T Consensus       796 ID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~------~~  869 (1036)
T PLN02316        796 IDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE------RN  869 (1036)
T ss_pred             ccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh------cC
Confidence            99987655321                  1345889999985344889999999999999999999999875      46


Q ss_pred             eEEEEEeCCCch---hHHhh----h----CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEE
Q 011355          329 TVFLVAGDGPWG---ARYRD----L----GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMA  397 (488)
Q Consensus       329 ~~l~ivG~g~~~---~~~~~----l----~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~  397 (488)
                      ++|+|+|+|++.   +.+++    +    .++|.|.|..+......+|+.||+||+||. .|+||++.+|||+||+|+|+
T Consensus       870 ~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~-~EP~GLvqLEAMa~GtppVv  948 (1036)
T PLN02316        870 GQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSI-FEPCGLTQLTAMRYGSIPVV  948 (1036)
T ss_pred             cEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCc-ccCccHHHHHHHHcCCCeEE
Confidence            899999998753   22222    2    357999887654444589999999999997 59999999999999999999


Q ss_pred             eCCCCcccceeecC-------------CceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          398 TRLASIVGSVIVGT-------------DMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       398 ~~~~~~~~e~v~~~-------------~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      +++||++ |.|.++             .+|++|++ |+++++.+|.+++.+..+....+++.+++.+.+.|||+.++++|
T Consensus       949 s~vGGL~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316        949 RKTGGLF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred             EcCCCcH-hhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence            9999998 787763             68999999 99999999999998744556677888888888899999999999


Q ss_pred             HHHHHHhh
Q 011355          464 ERLFLCIS  471 (488)
Q Consensus       464 ~~~~~~~~  471 (488)
                      +++|+++.
T Consensus      1028 ~~LY~~a~ 1035 (1036)
T PLN02316       1028 MELYHSAR 1035 (1036)
T ss_pred             HHHHHHHh
Confidence            99998875

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=1.8e-41  Score=332.74  Aligned_cols=361  Identities=23%  Similarity=0.337  Sum_probs=264.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCC--CccCcchhHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKP--TAAGYLDQSIVWQQ  154 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~  154 (488)
                      |||++++..|||. ..||.++++.+|+++|.++ ++|+|++......  .   ..++.+.....  ...........+..
T Consensus         1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (388)
T TIGR02149         1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--D---SEGLTVKGYRPWSELKEANKALGTFSV   73 (388)
T ss_pred             CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--c---CCCeEEEEecChhhccchhhhhhhhhH
Confidence            8999999988873 4699999999999999987 7888887654321  1   12222221111  00010111111111


Q ss_pred             HHHHhcCCCCCcEEEeCCcch--HHh---hhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHh
Q 011355          155 LQTQNSTGKPFDVIHTESVGL--RHT---RARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEV  229 (488)
Q Consensus       155 ~~~~~~~~~~~Dvv~~~~~~~--~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      .........++|+||+|+...  ..+   ...++| ++.+.|+........   .......     ..+...+     +.
T Consensus        74 ~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~---~~~~~~~-----~~~~~~~-----~~  139 (388)
T TIGR02149        74 DLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKP-LVVTAHSLEPLRPWK---EEQLGGG-----YKLSSWA-----EK  139 (388)
T ss_pred             HHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCC-EEEEeeccccccccc---ccccccc-----hhHHHHH-----HH
Confidence            111112222799999997421  112   223567 999999864321100   0000000     1111111     12


Q ss_pred             hhcCCccEEEEcChhhHHHHHHHh-cCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccCh
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIY-MIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH  308 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~-g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~  308 (488)
                      ..++.+|.++++|+..++.+.+.+ +++..++.++|||+|.+.+.+.  .....++++++++++ ++++++||+.+.||+
T Consensus       140 ~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~--~~~~~~~~~~~~~~~-~~i~~~Grl~~~Kg~  216 (388)
T TIGR02149       140 TAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD--DGNVVLDRYGIDRSR-PYILFVGRITRQKGV  216 (388)
T ss_pred             HHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCC--chHHHHHHhCCCCCc-eEEEEEcccccccCH
Confidence            456889999999999999998876 6777899999999999877653  235678888987776 789999999999999


Q ss_pred             HHHHHHHHHhHhhccCCCCCeEEEEEeCCCchh----HHhh----hC---CcEEEe-CccCHHHHHHHHHhcCEEEeCCC
Q 011355          309 PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGA----RYRD----LG---TNVIVL-GPLDQTRLAMFYNAIDIFVNPTL  376 (488)
Q Consensus       309 ~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~----~~~~----l~---~~V~~~-g~v~~~~l~~~~~~adv~v~ps~  376 (488)
                      +.+++|++.+.       ++++++++|+|+...    .+++    +.   .+|.+. |.++.+++..+|+.||++|+||.
T Consensus       217 ~~li~a~~~l~-------~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~  289 (388)
T TIGR02149       217 PHLLDAVHYIP-------KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSI  289 (388)
T ss_pred             HHHHHHHHHHh-------hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCc
Confidence            99999999884       567889988765432    2222    22   347765 67899999999999999999997


Q ss_pred             CCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CH------HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011355          377 RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QV------ESVKKALYGIWADGREVLEKKGLVARKR  449 (488)
Q Consensus       377 ~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~------~~la~~i~~ll~~~~~~~~~~~~~a~~~  449 (488)
                       .|++|++++|||+||+|||+++.++.. |++.++.+|+++++ |.      ++++++|.+++++ ++.+++|++++++.
T Consensus       290 -~e~~g~~~lEA~a~G~PvI~s~~~~~~-e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~  366 (388)
T TIGR02149       290 -YEPLGIVNLEAMACGTPVVASATGGIP-EVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAKKMGIAGRKR  366 (388)
T ss_pred             -cCCCChHHHHHHHcCCCEEEeCCCCHH-HHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence             499999999999999999999999998 89999999999998 77      9999999999998 99999999999999


Q ss_pred             HhhhCCHHHHHHHHHHHHHHhh
Q 011355          450 GLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       450 ~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                      +.++|||+.+++++.++|++++
T Consensus       367 ~~~~~s~~~~~~~~~~~y~~~~  388 (388)
T TIGR02149       367 AEEEFSWGSIAKKTVEMYRKVL  388 (388)
T ss_pred             HHHhCCHHHHHHHHHHHHHhhC
Confidence            9999999999999999998763

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=9.1e-42  Score=341.43  Aligned_cols=380  Identities=21%  Similarity=0.263  Sum_probs=266.4

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-------------------------CCCc
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-------------------------YPIS  131 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-------------------------~~~~  131 (488)
                      |||++++..++|....||...++..|.++|+++||+|.|+++.........                         ...+
T Consensus         1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (473)
T TIGR02095         1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE   80 (473)
T ss_pred             CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence            899999998777667999999999999999999999999998765432110                         0011


Q ss_pred             eEEEecC-------CC-CccC--cchh----HHHHHHHHHH-hcCCCCCcEEEeCCcc--h-HHhhhc-----cCCcEEE
Q 011355          132 SLYFHLS-------KP-TAAG--YLDQ----SIVWQQLQTQ-NSTGKPFDVIHTESVG--L-RHTRAR-----NLTNVVV  188 (488)
Q Consensus       132 ~i~~~~~-------~~-~~~~--~~~~----~~~~~~~~~~-~~~~~~~Dvv~~~~~~--~-~~~~~~-----~~p~~v~  188 (488)
                      ++.+...       ++ ..++  ..+.    ...-...... .....+|||||+|++.  + +.+++.     ++| ++.
T Consensus        81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~-~v~  159 (473)
T TIGR02095        81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIK-TVF  159 (473)
T ss_pred             CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCC-EEE
Confidence            1222111       10 0111  0011    0011111111 1122389999999742  2 222222     156 999


Q ss_pred             eeeCCcchhhhhh-hhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH-hc--------CCCC
Q 011355          189 SWHGIAYETIHSD-IIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI-YM--------IPEE  258 (488)
Q Consensus       189 ~~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~g--------~~~~  258 (488)
                      ++|+..+...... .... ...+.............+..-....+..+|.++++|+..++.+... +|        .++.
T Consensus       160 TiH~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~  238 (473)
T TIGR02095       160 TIHNLAYQGVFPADDFSE-LGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSG  238 (473)
T ss_pred             EcCCCccCCcCCHHHHHH-cCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCC
Confidence            9999764322111 1110 1111000000000000001011245688999999999998887642 22        2357


Q ss_pred             cEEEecCCccCCCcCCCcc-----------------cchhhhhhhCCCCC-CcEEEEEEeeeccccChHHHHHHHHHhHh
Q 011355          259 RVHVILNGVDEEVFKPDVA-----------------MGKDFKKKFGIPEN-RSLVLGMAGRLVKDKGHPLMFEALKQLLA  320 (488)
Q Consensus       259 ~i~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~-~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~  320 (488)
                      ++.+|+||+|.+.+.+...                 .+..+++++|++.+ +.++++++||+.++||++.+++|+.++.+
T Consensus       239 ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~  318 (473)
T TIGR02095       239 KLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE  318 (473)
T ss_pred             CeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH
Confidence            9999999999998875422                 23568899999862 33789999999999999999999999875


Q ss_pred             hccCCCCCeEEEEEeCCC--chhHHhh----hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCc
Q 011355          321 ENDTFRRSTVFLVAGDGP--WGARYRD----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP  394 (488)
Q Consensus       321 ~~~~~~~~~~l~ivG~g~--~~~~~~~----l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~P  394 (488)
                            .+++|+|+|+|+  ..+.+++    ...++.+.+..+.+++..+|+.||++++||.. |+||++++|||+||+|
T Consensus       319 ------~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~-E~~gl~~lEAma~G~p  391 (473)
T TIGR02095       319 ------LGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRF-EPCGLTQLYAMRYGTV  391 (473)
T ss_pred             ------cCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCCCc-CCcHHHHHHHHHCCCC
Confidence                  458999999985  3344443    34678888888888899999999999999974 9999999999999999


Q ss_pred             EEEeCCCCcccceeecC------CceeEeCC-CHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          395 LMATRLASIVGSVIVGT------DMGYLFSP-QVESVKKALYGIWA----DGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       395 VI~~~~~~~~~e~v~~~------~~g~l~~~-d~~~la~~i~~ll~----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      ||+++.||.. |++.++      .+|+++++ |+++++++|.+++.    + ++.+++|++++.   .++|||++++++|
T Consensus       392 vI~s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~-~~~~~~~~~~~~---~~~fsw~~~a~~~  466 (473)
T TIGR02095       392 PIVRRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQD-PSLWEALQKNAM---SQDFSWDKSAKQY  466 (473)
T ss_pred             eEEccCCCcc-ceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHh---ccCCCcHHHHHHH
Confidence            9999999998 888887      89999999 99999999999887    6 888999998875   3579999999999


Q ss_pred             HHHHHHh
Q 011355          464 ERLFLCI  470 (488)
Q Consensus       464 ~~~~~~~  470 (488)
                      .++|+++
T Consensus       467 ~~~Y~~l  473 (473)
T TIGR02095       467 VELYRSL  473 (473)
T ss_pred             HHHHHhC
Confidence            9999864

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.5e-41  Score=329.70  Aligned_cols=359  Identities=18%  Similarity=0.192  Sum_probs=253.4

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcch----------
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLD----------  147 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------  147 (488)
                      ||+|++.+||.         ....|+++|.++||+|+++|.........  +++.+.+........+...          
T Consensus         1 ~il~~~~~~p~---------~~~~la~~L~~~G~~v~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (396)
T cd03818           1 RILFVHQNFPG---------QFRHLAPALAAQGHEVVFLTEPNAAPPPG--GVRVVRYRPPRGPTSGTHPYLREFEEAVL   69 (396)
T ss_pred             CEEEECCCCch---------hHHHHHHHHHHCCCEEEEEecCCCCCCCC--CeeEEEecCCCCCCCCCCccchhHHHHHH
Confidence            68999998875         24579999999999999999987544332  3444444432211111111          


Q ss_pred             -hHHHHHHHHHHhcCCCCCcEEEeCCcch-HHhhhc---cCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          148 -QSIVWQQLQTQNSTGKPFDVIHTESVGL-RHTRAR---NLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       148 -~~~~~~~~~~~~~~~~~~Dvv~~~~~~~-~~~~~~---~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                       ....+..+.....+..+||+||+|+... ...+..   ..| ++...|-.... ...+..   + .+..........++
T Consensus        70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~-~v~~~~~~~~~-~~~~~~---~-~~~~~~~~~~~~~~  143 (396)
T cd03818          70 RGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAP-LIGYFEFYYRA-EGADVG---F-DPEFPPSLDDALRL  143 (396)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCC-EEEEEeeeecC-CCCCCC---C-CCCCCCchhHHHHH
Confidence             1122233333323334799999997432 222222   234 55544321110 000000   0 00000000000111


Q ss_pred             H-HHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEee
Q 011355          223 S-KVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR  301 (488)
Q Consensus       223 ~-~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  301 (488)
                      . +.......++.+|.+|++|++.++.+.+.+   .+++.|||||+|.+.|.+........+....+++++ ++++|+||
T Consensus       144 ~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~---~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~-~~i~~vgR  219 (396)
T cd03818         144 RNRNALILLALAQADAGVSPTRWQRSTFPAEL---RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGD-EVITFVAR  219 (396)
T ss_pred             HHhhhHhHHHHHhCCEEECCCHHHHhhCcHhh---ccceEEeCCCccccccCCCchhhhcccccccCCCCC-eEEEEECC
Confidence            1 100112457899999999999999987755   378999999999998876544323333333344555 78889997


Q ss_pred             -eccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC------------chh-HHhhh-----CCcEEEeCccCHHHHH
Q 011355          302 -LVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP------------WGA-RYRDL-----GTNVIVLGPLDQTRLA  362 (488)
Q Consensus       302 -l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~------------~~~-~~~~l-----~~~V~~~g~v~~~~l~  362 (488)
                       +.+.||++.+++|+..+.++.    |+++|+|+|++.            +.+ .++++     .++|+|+|+++++++.
T Consensus       220 ~l~~~Kg~~~ll~a~~~l~~~~----~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~  295 (396)
T cd03818         220 NLEPYRGFHVFMRALPRLLRAR----PDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYL  295 (396)
T ss_pred             CcccccCHHHHHHHHHHHHHHC----CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHH
Confidence             999999999999999999888    899999999732            111 12222     3689999999999999


Q ss_pred             HHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHH
Q 011355          363 MFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEK  441 (488)
Q Consensus       363 ~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~  441 (488)
                      .+|+.||++++||. .|++|++++||||||+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+.+
T Consensus       296 ~~l~~adv~v~~s~-~e~~~~~llEAmA~G~PVIas~~~g~~-e~i~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~  372 (396)
T cd03818         296 ALLQVSDVHVYLTY-PFVLSWSLLEAMACGCLVVGSDTAPVR-EVITDGENGLLVDFFDPDALAAAVIELLDD-PARRAR  372 (396)
T ss_pred             HHHHhCcEEEEcCc-ccccchHHHHHHHCCCCEEEcCCCCch-hhcccCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHH
Confidence            99999999999996 699999999999999999999999998 89999999999998 999999999999999 899999


Q ss_pred             HHHHHHHHHhhhCCHHHHHHHHH
Q 011355          442 KGLVARKRGLNLFTATKMAAAYE  464 (488)
Q Consensus       442 ~~~~a~~~~~~~fs~~~~~~~~~  464 (488)
                      |++++++.+.++|||+.++++|.
T Consensus       373 l~~~ar~~~~~~fs~~~~~~~~~  395 (396)
T cd03818         373 LRRAARRTALRYDLLSVCLPRQL  395 (396)
T ss_pred             HHHHHHHHHHHhccHHHHHHHHh
Confidence            99999999999999999999875

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-40  Score=323.78  Aligned_cols=351  Identities=24%  Similarity=0.335  Sum_probs=263.3

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCC----CCccCcchhHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSK----PTAAGYLDQSIVW  152 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~  152 (488)
                      |||++++.  |   ..||.++++.+++++|.++||+|+|++.........  ..+.+.+....    +............
T Consensus         1 mki~~~~~--p---~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (371)
T cd04962           1 MKIGIVCY--P---TYGGSGVVATELGKALARRGHEVHFITSSRPFRLDE--YSPNIFFHEVEVPQYPLFQYPPYDLALA   73 (371)
T ss_pred             CceeEEEE--e---CCCCccchHHHHHHHHHhcCCceEEEecCCCcchhh--hccCeEEEEecccccchhhcchhHHHHH
Confidence            79999973  2   579999999999999999999999998764321111  11122221110    0000111111122


Q ss_pred             HHHHHHhcCCCCCcEEEeCCcc---hHHhhh------ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHH
Q 011355          153 QQLQTQNSTGKPFDVIHTESVG---LRHTRA------RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERAS  223 (488)
Q Consensus       153 ~~~~~~~~~~~~~Dvv~~~~~~---~~~~~~------~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      ..+.+..++. +||+||+|...   ...++.      .++| ++.+.|+.......          . ..    ....+.
T Consensus        74 ~~l~~~i~~~-~~divh~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~----------~-~~----~~~~~~  136 (371)
T cd04962          74 SKIAEVAKRY-KLDLLHVHYAVPHAVAAYLAREILGKKDLP-VVTTLHGTDITLVG----------Q-DP----SFQPAT  136 (371)
T ss_pred             HHHHHHHhcC-CccEEeecccCCccHHHHHHHHhcCcCCCc-EEEEEcCCcccccc----------c-cc----cchHHH
Confidence            3333333333 89999998532   122211      1467 88999975322110          0 00    001111


Q ss_pred             HHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeec
Q 011355          224 KVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV  303 (488)
Q Consensus       224 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~  303 (488)
                      +     ..++++|.++++|+...+.+.+.++ ...++.++|||+|...+.+...  ...++++++++++ .+++++|++.
T Consensus       137 ~-----~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~i~vi~n~~~~~~~~~~~~--~~~~~~~~~~~~~-~~il~~g~l~  207 (371)
T cd04962         137 R-----FSIEKSDGVTAVSESLRQETYELFD-ITKEIEVIPNFVDEDRFRPKPD--EALKRRLGAPEGE-KVLIHISNFR  207 (371)
T ss_pred             H-----HHHhhCCEEEEcCHHHHHHHHHhcC-CcCCEEEecCCcCHhhcCCCch--HHHHHhcCCCCCC-eEEEEecccc
Confidence            1     3467899999999999999988654 4678999999999876654332  4466778887777 7889999999


Q ss_pred             cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC
Q 011355          304 KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       304 ~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~  377 (488)
                      +.||++.+++++..+.++     .+++++++|.|+..+.+++      +.++|.|.|..  +++.++|+.||++|+||. 
T Consensus       208 ~~K~~~~li~a~~~l~~~-----~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~v~ps~-  279 (371)
T cd04962         208 PVKRIDDVIRIFAKVRKE-----VPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLFLLPSE-  279 (371)
T ss_pred             cccCHHHHHHHHHHHHhc-----CCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEEEeCCC-
Confidence            999999999999998765     3689999999987666554      24689999985  589999999999999997 


Q ss_pred             CCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCH
Q 011355          378 AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTA  456 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~  456 (488)
                      .||+|++++|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+.+|++++++.+.++|||
T Consensus       280 ~E~~~~~~~EAma~g~PvI~s~~~~~~-e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~  357 (371)
T cd04962         280 KESFGLAALEAMACGVPVVASNAGGIP-EVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDS  357 (371)
T ss_pred             cCCCccHHHHHHHcCCCEEEeCCCCch-hhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCH
Confidence            599999999999999999999999988 89999999999999 999999999999998 999999999999998889999


Q ss_pred             HHHHHHHHHHHHHh
Q 011355          457 TKMAAAYERLFLCI  470 (488)
Q Consensus       457 ~~~~~~~~~~~~~~  470 (488)
                      +.+++++.++|+++
T Consensus       358 ~~~~~~~~~~y~~~  371 (371)
T cd04962         358 ERIVPQYEALYRRL  371 (371)
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999999763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.7e-40  Score=322.06  Aligned_cols=363  Identities=18%  Similarity=0.192  Sum_probs=254.9

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-CCCceEEEecCCCC-ccCcch----hHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-YPISSLYFHLSKPT-AAGYLD----QSI  150 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~i~~~~~~~~-~~~~~~----~~~  150 (488)
                      |||+++++.+    ..||+++++.+|+++|.++||+|+++|.......... .....+.+...... ....+.    ...
T Consensus         1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   76 (392)
T cd03805           1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCA   76 (392)
T ss_pred             CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEcchhhHhHHHHHH
Confidence            8999998743    5799999999999999999999999997543221111 11111222211100 001111    111


Q ss_pred             HHHH----HHHHhcCCCCCcEEEeCCcchHHhhh---ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHH
Q 011355          151 VWQQ----LQTQNSTGKPFDVIHTESVGLRHTRA---RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERAS  223 (488)
Q Consensus       151 ~~~~----~~~~~~~~~~~Dvv~~~~~~~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      .+..    +........++|+||+++........   ...| ++.+.|......          ... ......++....
T Consensus        77 ~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~----------~~~-~~~~~~~~~~~~  144 (392)
T cd03805          77 YLRMLYLALYLLLLPDEKYDVFIVDQVSACVPLLKLFSPSK-ILFYCHFPDQLL----------AQR-GSLLKRLYRKPF  144 (392)
T ss_pred             HHHHHHHHHHHHhcccCCCCEEEEcCcchHHHHHHHhcCCc-EEEEEecChHHh----------cCC-CcHHHHHHHHHH
Confidence            1111    11111222389999998744322221   1234 888888422110          011 111122332222


Q ss_pred             HHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCC-CcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          224 KVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPE-ERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       224 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~-~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      +.. +...++.+|.++++|+..++.+.+.++... .++.+|+||+|.+.+.+.....  .++....+++. ++++++||+
T Consensus       145 ~~~-e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~--~~~~~~~~~~~-~~i~~~grl  220 (392)
T cd03805         145 DWL-EEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP--DPGLLIPKSGK-KTFLSINRF  220 (392)
T ss_pred             HHH-HHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc--cccccccCCCc-eEEEEEeee
Confidence            222 225678999999999999999988775433 3446999999988776543221  22333344444 889999999


Q ss_pred             ccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--------hHHh----h---hCCcEEEeCccCHHHHHHHHHh
Q 011355          303 VKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--------ARYR----D---LGTNVIVLGPLDQTRLAMFYNA  367 (488)
Q Consensus       303 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--------~~~~----~---l~~~V~~~g~v~~~~l~~~~~~  367 (488)
                      .+.||++.+++|+.++.++... .++++|+++|+|+..        ++++    +   +.++|.|+|+++.+++..+|+.
T Consensus       221 ~~~Kg~~~ll~a~~~l~~~~~~-~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~  299 (392)
T cd03805         221 ERKKNIALAIEAFAILKDKLAE-FKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSS  299 (392)
T ss_pred             cccCChHHHHHHHHHHHhhccc-ccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhh
Confidence            9999999999999999875300 058999999987642        2222    2   3578999999999999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVAR  447 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~  447 (488)
                      ||++++||. .|+||++++|||+||+|||+++.++.. |++.++.+|+++++|+++++++|.+++++ ++.+++|+++++
T Consensus       300 ad~~l~~s~-~E~~g~~~lEAma~G~PvI~s~~~~~~-e~i~~~~~g~~~~~~~~~~a~~i~~l~~~-~~~~~~~~~~a~  376 (392)
T cd03805         300 ARALLYTPS-NEHFGIVPLEAMYAGKPVIACNSGGPL-ETVVDGETGFLCEPTPEEFAEAMLKLAND-PDLADRMGAAGR  376 (392)
T ss_pred             CeEEEECCC-cCCCCchHHHHHHcCCCEEEECCCCcH-HHhccCCceEEeCCCHHHHHHHHHHHHhC-hHHHHHHHHHHH
Confidence            999999997 599999999999999999999999987 88999999999977999999999999999 889999999999


Q ss_pred             HHHhhhCCHHHHHHHH
Q 011355          448 KRGLNLFTATKMAAAY  463 (488)
Q Consensus       448 ~~~~~~fs~~~~~~~~  463 (488)
                      +++.++|+|+.+++++
T Consensus       377 ~~~~~~~s~~~~~~~~  392 (392)
T cd03805         377 KRVKEKFSTEAFAERL  392 (392)
T ss_pred             HHHHHhcCHHHHhhhC
Confidence            9999999999998763

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=1.2e-39  Score=329.64  Aligned_cols=366  Identities=16%  Similarity=0.149  Sum_probs=254.8

Q ss_pred             CCCCCCce-EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCC--------------eEEEEecCC-CCC-CC-C---CC
Q 011355           70 SNPPLKLL-KIALFVKKWPHRSHAGGLERHALTLHLALAKRGH--------------ELHIFTASC-LNC-SF-P---TY  128 (488)
Q Consensus        70 ~~~~~~~m-kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--------------~V~v~~~~~-~~~-~~-~---~~  128 (488)
                      ..+|-++. ||+++..    +...||+|+++.+|+.+|.+.++              .|.+++... .+. .. .   ..
T Consensus       274 ~~~~~~~~~rIl~vi~----sl~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~  349 (694)
T PRK15179        274 DAGPESFVGPVLMING----SLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADA  349 (694)
T ss_pred             cCCCCCCcceEEEEeC----CCCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhC
Confidence            44555667 9999997    44789999999999999999854              344443321 111 11 1   13


Q ss_pred             CCceEEEecCCCCccC-------cc---------hhHHHHHHHHHHhcCCCCCcEEEeCCcch-----HHhhhccCCcEE
Q 011355          129 PISSLYFHLSKPTAAG-------YL---------DQSIVWQQLQTQNSTGKPFDVIHTESVGL-----RHTRARNLTNVV  187 (488)
Q Consensus       129 ~~~~i~~~~~~~~~~~-------~~---------~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~-----~~~~~~~~p~~v  187 (488)
                      +++...+.........       .+         ........+....+.. +|||||+|+...     ......++|.++
T Consensus       350 Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~-kpDIVH~h~~~a~~lg~lAa~~~gvPvIv  428 (694)
T PRK15179        350 GIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSS-VPSVVHIWQDGSIFACALAALLAGVPRIV  428 (694)
T ss_pred             CCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHc-CCcEEEEeCCcHHHHHHHHHHHcCCCEEE
Confidence            3333333222100000       00         0111223333344444 899999997432     122223567334


Q ss_pred             EeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCc
Q 011355          188 VSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGV  267 (488)
Q Consensus       188 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngv  267 (488)
                      .+.|+........            .+ ...+..+.+..    .....+.++++|+..++.+.+.+|++.+++.|||||+
T Consensus       429 ~t~h~~~~~~~~~------------~~-~~~~~~l~~~l----~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGV  491 (694)
T PRK15179        429 LSVRTMPPVDRPD------------RY-RVEYDIIYSEL----LKMRGVALSSNSQFAAHRYADWLGVDERRIPVVYNGL  491 (694)
T ss_pred             EEeCCCccccchh------------HH-HHHHHHHHHHH----HhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCc
Confidence            4667642211000            00 11111111111    1123467788888888888877899989999999999


Q ss_pred             cCCCcCCCcccchhhhhh--hCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh
Q 011355          268 DEEVFKPDVAMGKDFKKK--FGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD  345 (488)
Q Consensus       268 d~~~~~~~~~~~~~~r~~--~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~  345 (488)
                      |...|.+.+.... .+..  ...+.+. ++|+++||+.+.||++.+++|+.++.++.    |+++|+|+|+|+..+.+++
T Consensus       492 d~~~f~~~~~~~~-~~~~~~~~~~~~~-~vIg~VGRL~~~KG~~~LI~A~a~l~~~~----p~~~LvIvG~G~~~~~L~~  565 (694)
T PRK15179        492 APLKSVQDDACTA-MMAQFDARTSDAR-FTVGTVMRVDDNKRPFLWVEAAQRFAASH----PKVRFIMVGGGPLLESVRE  565 (694)
T ss_pred             CHHhcCCCchhhH-HHHhhccccCCCC-eEEEEEEeCCccCCHHHHHHHHHHHHHHC----cCeEEEEEccCcchHHHHH
Confidence            9887754332211 1111  1233334 78999999999999999999999999888    8999999999987766654


Q ss_pred             ------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC
Q 011355          346 ------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP  419 (488)
Q Consensus       346 ------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~  419 (488)
                            +.++|+|+|+.+  ++..+|+.+|++|+||. .||||++++|||+||+|||+|+.+|.. |++.++.+|+++++
T Consensus       566 l~~~lgL~~~V~flG~~~--dv~~ll~aaDv~VlpS~-~Egfp~vlLEAMA~G~PVVat~~gG~~-EiV~dg~~GlLv~~  641 (694)
T PRK15179        566 FAQRLGMGERILFTGLSR--RVGYWLTQFNAFLLLSR-FEGLPNVLIEAQFSGVPVVTTLAGGAG-EAVQEGVTGLTLPA  641 (694)
T ss_pred             HHHHcCCCCcEEEcCCcc--hHHHHHHhcCEEEeccc-cccchHHHHHHHHcCCeEEEECCCChH-HHccCCCCEEEeCC
Confidence                  348999999954  89999999999999997 599999999999999999999999998 99999999999987


Q ss_pred             -C--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          420 -Q--VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       420 -d--~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                       |  .++++++|.+++.+ ......+++++++++.++|||+.+++++.++|+
T Consensus       642 ~d~~~~~La~aL~~ll~~-l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~  692 (694)
T PRK15179        642 DTVTAPDVAEALARIHDM-CAADPGIARKAADWASARFSLNQMIASTVRCYQ  692 (694)
T ss_pred             CCCChHHHHHHHHHHHhC-hhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence             5  46999999998887 555678889999999999999999999999994

>PRK14098 glycogen synthase; Provisional

Probab=100.00  E-value=8e-40  Score=324.53  Aligned_cols=381  Identities=18%  Similarity=0.199  Sum_probs=266.0

Q ss_pred             ceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC---C------------CC-----------
Q 011355           76 LLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFP---T------------YP-----------  129 (488)
Q Consensus        76 ~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~------------~~-----------  129 (488)
                      .|||+++++..-|-...||....+..|.++|+++||+|.|+.+........   .            ..           
T Consensus         5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (489)
T PRK14098          5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT   84 (489)
T ss_pred             CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence            399999998776667999999999999999999999999999966433211   0            00           


Q ss_pred             -Cc--eEEEec-------CCCCccCc------c-hhHHHH----HHHHHHhc-CCCCCcEEEeCCcc---hHHhhh----
Q 011355          130 -IS--SLYFHL-------SKPTAAGY------L-DQSIVW----QQLQTQNS-TGKPFDVIHTESVG---LRHTRA----  180 (488)
Q Consensus       130 -~~--~i~~~~-------~~~~~~~~------~-~~~~~~----~~~~~~~~-~~~~~Dvv~~~~~~---~~~~~~----  180 (488)
                       .+  ++.+..       .++..++.      + +....+    ........ ...+|||||+|++.   ++.++.    
T Consensus        85 ~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~  164 (489)
T PRK14098         85 ALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYA  164 (489)
T ss_pred             cccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhh
Confidence             00  011100       11111111      0 111111    11111111 12279999999732   233232    


Q ss_pred             -----ccCCcEEEeeeCCcchhhhh-hhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH--
Q 011355          181 -----RNLTNVVVSWHGIAYETIHS-DIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI--  252 (488)
Q Consensus       181 -----~~~p~~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~--  252 (488)
                           .++| ++.++|+..+..... ......  .+.... ..+........-....+..+|.|+++|+..++.+.+.  
T Consensus       165 ~~~~~~~~~-~V~TiHn~~~qg~~~~~~~~~~--~~~~~~-~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~  240 (489)
T PRK14098        165 DHEFFKDIK-TVLTIHNVYRQGVLPFKVFQKL--LPEEVC-SGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGE  240 (489)
T ss_pred             hccccCCCC-EEEEcCCCcccCCCCHHHHHHh--CCHHhh-hhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCC
Confidence                 1467 999999976532211 111110  010000 0000000000001134578999999999999988752  


Q ss_pred             --hcCC------CCcEEEecCCccCCCcCCCcc-----------------cchhhhhhhCCCCC-CcEEEEEEeeecccc
Q 011355          253 --YMIP------EERVHVILNGVDEEVFKPDVA-----------------MGKDFKKKFGIPEN-RSLVLGMAGRLVKDK  306 (488)
Q Consensus       253 --~g~~------~~~i~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~-~~~~i~~~Grl~~~K  306 (488)
                        +|++      ..++.+|+||||.+.+.+...                 .+..+++++|++.+ +.++++++||+.++|
T Consensus       241 ~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~K  320 (489)
T PRK14098        241 EAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQ  320 (489)
T ss_pred             CCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccC
Confidence              3443      679999999999998876432                 13467788898743 337899999999999


Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc--hhHHhh----hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCC
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW--GARYRD----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQG  380 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~--~~~~~~----l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg  380 (488)
                      |++.+++|+..+.+      ++++|+|+|+|+.  .+.+++    +.++|.|.|.++++++..+|+.||++++||. .|+
T Consensus       321 G~d~li~a~~~l~~------~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~-~E~  393 (489)
T PRK14098        321 GAELLAESLEKLVE------LDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDMLLMPGK-IES  393 (489)
T ss_pred             cHHHHHHHHHHHHh------cCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCEEEeCCC-CCC
Confidence            99999999999875      5799999999874  344444    4578999999999999999999999999997 599


Q ss_pred             CChHHHHHHHcCCcEEEeCCCCcccceeec----CCceeEeCC-CHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHhh
Q 011355          381 LDHTVLEAMLSGKPLMATRLASIVGSVIVG----TDMGYLFSP-QVESVKKALYGIW---ADGREVLEKKGLVARKRGLN  452 (488)
Q Consensus       381 ~~~~~lEAma~G~PVI~~~~~~~~~e~v~~----~~~g~l~~~-d~~~la~~i~~ll---~~~~~~~~~~~~~a~~~~~~  452 (488)
                      ||++.+|||+||+|+|+++.||.. |.+.+    +.+|+++++ |+++++++|.+++   ++ ++.+.++++++   +.+
T Consensus       394 ~Gl~~lEAma~G~ppVv~~~GGl~-d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~-~~~~~~~~~~~---~~~  468 (489)
T PRK14098        394 CGMLQMFAMSYGTIPVAYAGGGIV-ETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHD-EERWEELVLEA---MER  468 (489)
T ss_pred             chHHHHHHHhCCCCeEEecCCCCc-eeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcC-HHHHHHHHHHH---hcC
Confidence            999999999999999999999998 76654    679999999 9999999999865   45 77777777665   346


Q ss_pred             hCCHHHHHHHHHHHHHHhhc
Q 011355          453 LFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       453 ~fs~~~~~~~~~~~~~~~~~  472 (488)
                      +|||+.++++|.++|+++++
T Consensus       469 ~fsw~~~a~~y~~lY~~~~~  488 (489)
T PRK14098        469 DFSWKNSAEEYAQLYRELLG  488 (489)
T ss_pred             CCChHHHHHHHHHHHHHHhc
Confidence            79999999999999998864

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=1.6e-39  Score=333.72  Aligned_cols=389  Identities=16%  Similarity=0.137  Sum_probs=268.1

Q ss_pred             CCCCCceEEEEEecCC-C--------CCCCCCcHHHHHHHHHHHHHHCC--CeEEEEecCCCCCCC------C-------
Q 011355           71 NPPLKLLKIALFVKKW-P--------HRSHAGGLERHALTLHLALAKRG--HELHIFTASCLNCSF------P-------  126 (488)
Q Consensus        71 ~~~~~~mkIl~i~~~~-p--------~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~------~-------  126 (488)
                      ....++|.|++|+.+- +        -+...||...|+.+|+++|+++|  |+|+++|........      .       
T Consensus       164 ~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~  243 (1050)
T TIGR02468       164 QQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPR  243 (1050)
T ss_pred             hcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccc
Confidence            3345789999998532 2        13467899999999999999998  899999987643210      0       


Q ss_pred             -----------CCCCceEEEecCCCC-cc---CcchhHHHH-HHHHHHhc-------------CCCCCcEEEeCCcc---
Q 011355          127 -----------TYPISSLYFHLSKPT-AA---GYLDQSIVW-QQLQTQNS-------------TGKPFDVIHTESVG---  174 (488)
Q Consensus       127 -----------~~~~~~i~~~~~~~~-~~---~~~~~~~~~-~~~~~~~~-------------~~~~~Dvv~~~~~~---  174 (488)
                                 ..+...++++..... ..   ..|.+...+ ..+.....             ....||+||.|...   
T Consensus       244 ~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~  323 (1050)
T TIGR02468       244 SSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGD  323 (1050)
T ss_pred             ccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHH
Confidence                       012233344433221 00   112111111 11111110             11149999999632   


Q ss_pred             --hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCC--ChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHH
Q 011355          175 --LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPE--EPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLK  250 (488)
Q Consensus       175 --~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~  250 (488)
                        .......++| ++.+.|.......     ..+.....  .......+....+...+...+..||.||+.|....+.+.
T Consensus       324 aa~~L~~~lgVP-~V~T~HSLgr~K~-----~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~  397 (1050)
T TIGR02468       324 SAALLSGALNVP-MVLTGHSLGRDKL-----EQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQW  397 (1050)
T ss_pred             HHHHHHHhhCCC-EEEECccchhhhh-----hhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHH
Confidence              2222334679 9999997531110     00000000  000001112222333344678999999999999998766


Q ss_pred             HHhc-CC---------------------CCcEEEecCCccCCCcCCCcccc-------------------hhhhhhhCCC
Q 011355          251 RIYM-IP---------------------EERVHVILNGVDEEVFKPDVAMG-------------------KDFKKKFGIP  289 (488)
Q Consensus       251 ~~~g-~~---------------------~~~i~vi~ngvd~~~~~~~~~~~-------------------~~~r~~~~i~  289 (488)
                      ..|+ .+                     ..++.|||||+|++.|.+.....                   ..++. +..+
T Consensus       398 ~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r-~~~~  476 (1050)
T TIGR02468       398 GLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMR-FFTN  476 (1050)
T ss_pred             HHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHh-hccc
Confidence            6553 22                     34899999999999887642111                   12222 2334


Q ss_pred             CCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhH-----------Hhh------hCCcEEE
Q 011355          290 ENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGAR-----------YRD------LGTNVIV  352 (488)
Q Consensus       290 ~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~-----------~~~------l~~~V~~  352 (488)
                      +++ ++|+++||+.+.||++.||+|+..+.+....  +++. +|+|.++..+.           +++      +.++|.|
T Consensus       477 pdk-pvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~--~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~F  552 (1050)
T TIGR02468       477 PRK-PMILALARPDPKKNITTLVKAFGECRPLREL--ANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAY  552 (1050)
T ss_pred             CCC-cEEEEEcCCccccCHHHHHHHHHHhHhhccC--CCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEe
Confidence            555 6788999999999999999999998753200  4665 46787653221           221      4588999


Q ss_pred             eCccCHHHHHHHHHhc----CEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHH
Q 011355          353 LGPLDQTRLAMFYNAI----DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKA  427 (488)
Q Consensus       353 ~g~v~~~~l~~~~~~a----dv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~  427 (488)
                      +|+++++++..+|+.|    |+||+||.. |+||++++||||||+|||+|+.||.. |++.++.+|+++++ |+++|+++
T Consensus       553 lG~v~~edvp~lYr~Ad~s~DVFV~PS~~-EgFGLvlLEAMAcGlPVVASdvGG~~-EII~~g~nGlLVdP~D~eaLA~A  630 (1050)
T TIGR02468       553 PKHHKQSDVPDIYRLAAKTKGVFINPAFI-EPFGLTLIEAAAHGLPMVATKNGGPV-DIHRVLDNGLLVDPHDQQAIADA  630 (1050)
T ss_pred             cCCCCHHHHHHHHHHhhhcCCeeeCCccc-CCCCHHHHHHHHhCCCEEEeCCCCcH-HHhccCCcEEEECCCCHHHHHHH
Confidence            9999999999999988    699999974 99999999999999999999999998 89999999999999 99999999


Q ss_pred             HHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhccc
Q 011355          428 LYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDE  474 (488)
Q Consensus       428 i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~  474 (488)
                      |.+++++ ++.+++|++++++.+. +|+|+.++++|.+.+..+...+
T Consensus       631 L~~LL~D-pelr~~m~~~gr~~v~-~FSWe~ia~~yl~~i~~~~~~~  675 (1050)
T TIGR02468       631 LLKLVAD-KQLWAECRQNGLKNIH-LFSWPEHCKTYLSRIASCRPRH  675 (1050)
T ss_pred             HHHHhhC-HHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHhccC
Confidence            9999999 9999999999999985 5999999999999999887654

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PRK10125 putative glycosyl transferase; Provisional

Probab=100.00  E-value=1.2e-39  Score=316.62  Aligned_cols=358  Identities=17%  Similarity=0.150  Sum_probs=240.2

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCCCcc--------Ccc
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKPTAA--------GYL  146 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~--------~~~  146 (488)
                      |||+.|..    ....||+|+.+.+|++.|.++||+|.++...........  ...........+....        ...
T Consensus         1 mkil~i~~----~l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (405)
T PRK10125          1 MNILQFNV----RLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNR   76 (405)
T ss_pred             CeEEEEEe----eecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcch
Confidence            89999987    347899999999999999999999999998765444322  1111111111110000        000


Q ss_pred             hhHHHHHHHHHHhcCCCCCcEEEeCCcc-----hHH---------hhhccCCcEEEeeeCCcchhhhhhhhHhhhc----
Q 011355          147 DQSIVWQQLQTQNSTGKPFDVIHTESVG-----LRH---------TRARNLTNVVVSWHGIAYETIHSDIIQELLR----  208 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Dvv~~~~~~-----~~~---------~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~----  208 (488)
                      ..........+......+|||||+|...     +..         ....++| +++++|+.+..+.+..+.....+    
T Consensus        77 ~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~p-iV~TlHd~~~~tg~c~~~~~C~~~~~~  155 (405)
T PRK10125         77 DLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVT-LVWTLHDHWSVTGRCAFTDGCEGWKTG  155 (405)
T ss_pred             hhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCC-EEEecccccccCCCcCCCccccccccc
Confidence            0011122222222112289999999632     221         1122457 99999999976533332111111    


Q ss_pred             ---------CCCCh--hHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcc
Q 011355          209 ---------TPEEP--QAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVA  277 (488)
Q Consensus       209 ---------~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~  277 (488)
                               +|...  ........-.+...  ..++.++.+|++|++.++.+.+.++  ..++.+||||+|.+.+...+.
T Consensus       156 c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~--~~~~~~~~iV~~S~~l~~~~~~~~~--~~~i~vI~NGid~~~~~~~~~  231 (405)
T PRK10125        156 CQKCPTLNNYPPVKVDRAHQLVAGKRQLFR--EMLALGCQFISPSQHVADAFNSLYG--PGRCRIINNGIDMATEAILAE  231 (405)
T ss_pred             CCCCCCccCCCCCccchHHHHHHHHHHHHH--HHhhcCcEEEEcCHHHHHHHHHHcC--CCCEEEeCCCcCccccccccc
Confidence                     11111  11122211111211  3345678999999999999887655  578999999999743222111


Q ss_pred             cchhhhhhhCCCCCCcEEEEEEeee--ccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCc
Q 011355          278 MGKDFKKKFGIPENRSLVLGMAGRL--VKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGP  355 (488)
Q Consensus       278 ~~~~~r~~~~i~~~~~~~i~~~Grl--~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~  355 (488)
                      . ...+    .++++ .+++++|+.  .+.||++.+++|+..+.       ++++|+++|+|+...     .++|.++|+
T Consensus       232 ~-~~~~----~~~~~-~~il~v~~~~~~~~Kg~~~li~A~~~l~-------~~~~L~ivG~g~~~~-----~~~v~~~g~  293 (405)
T PRK10125        232 L-PPVR----ETQGK-PKIAVVAHDLRYDGKTDQQLVREMMALG-------DKIELHTFGKFSPFT-----AGNVVNHGF  293 (405)
T ss_pred             c-cccc----cCCCC-CEEEEEEeccccCCccHHHHHHHHHhCC-------CCeEEEEEcCCCccc-----ccceEEecC
Confidence            0 0011    12333 678899984  47899999999998863       679999999875422     357899997


Q ss_pred             c-CHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHh
Q 011355          356 L-DQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWA  433 (488)
Q Consensus       356 v-~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~  433 (488)
                      . +.+++.++|++||+||+||. .||||++++||||||+|||+|++||++ |++.+ .+|+++++ |+++|++.+.    
T Consensus       294 ~~~~~~l~~~y~~aDvfV~pS~-~Egfp~vilEAmA~G~PVVat~~gG~~-Eiv~~-~~G~lv~~~d~~~La~~~~----  366 (405)
T PRK10125        294 ETDKRKLMSALNQMDALVFSSR-VDNYPLILCEALSIGVPVIATHSDAAR-EVLQK-SGGKTVSEEEVLQLAQLSK----  366 (405)
T ss_pred             cCCHHHHHHHHHhCCEEEECCc-cccCcCHHHHHHHcCCCEEEeCCCChH-HhEeC-CcEEEECCCCHHHHHhccC----
Confidence            6 56899999999999999998 599999999999999999999999998 77766 49999999 9999998543    


Q ss_pred             cCHHHHHH----HHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Q 011355          434 DGREVLEK----KGLVARKRGLNLFTATKMAAAYERLFLCI  470 (488)
Q Consensus       434 ~~~~~~~~----~~~~a~~~~~~~fs~~~~~~~~~~~~~~~  470 (488)
                        ++..++    +.+++++.+.++||++.++++|.++|+++
T Consensus       367 --~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l  405 (405)
T PRK10125        367 --PEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL  405 (405)
T ss_pred             --HHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence              333222    23568888889999999999999999763

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=8.6e-39  Score=308.20  Aligned_cols=359  Identities=13%  Similarity=0.170  Sum_probs=252.1

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHH----HHHCCC--------eEEEEecCCCCCCCCC--------CCCceEEEec
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLA----LAKRGH--------ELHIFTASCLNCSFPT--------YPISSLYFHL  137 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~----L~~~G~--------~V~v~~~~~~~~~~~~--------~~~~~i~~~~  137 (488)
                      .+++++.    +...||+|+.+.+++-+    .++.|-        .|.+++..-.......        ..++...+..
T Consensus       163 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (578)
T PRK15490        163 RLALCTG----SLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAK  238 (578)
T ss_pred             ceEEEec----CCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeec
Confidence            4889987    45789999999955544    444443        6788877644333222        3333333322


Q ss_pred             CCCCccCc----------------chhHHHHHHHHHHhcCCCCCcEEEeCCcch--H---HhhhccCCcEEEeeeCCcch
Q 011355          138 SKPTAAGY----------------LDQSIVWQQLQTQNSTGKPFDVIHTESVGL--R---HTRARNLTNVVVSWHGIAYE  196 (488)
Q Consensus       138 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~--~---~~~~~~~p~~v~~~h~~~~~  196 (488)
                      .....+..                ......+..+....+.. +||+||+|....  .   ..+..+.|.++.+.|+.+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~~-rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~  317 (578)
T PRK15490        239 ITGNLFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCER-KLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPV  317 (578)
T ss_pred             cchhhhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHHc-CCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCc
Confidence            21100000                01112233334444444 899999996432  1   12223567345566762111


Q ss_pred             hhhhhhhHhhhcCCCChhHHHHHHHHHHHHHH-hhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCC
Q 011355          197 TIHSDIIQELLRTPEEPQAYALAERASKVVEE-VKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPD  275 (488)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~  275 (488)
                      .                . ......-.....+ ......+| +++.|...++.+.+.++++++++.+||||+|...|.+.
T Consensus       318 ~----------------~-~r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~  379 (578)
T PRK15490        318 V----------------R-KRLFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPS  379 (578)
T ss_pred             c----------------h-hhHHHHHHHHhhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCcc
Confidence            0                0 1111000011111 01234445 78889999999988889999999999999999887765


Q ss_pred             cccchhhhhh--hCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hC
Q 011355          276 VAMGKDFKKK--FGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LG  347 (488)
Q Consensus       276 ~~~~~~~r~~--~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~  347 (488)
                      .......++.  .+++++. ++++++||+.+.||+..+++++.++.++.    |+++|+|+|+|+..+.+++      +.
T Consensus       380 ~~~~~~~r~~~~~~l~~~~-~vIg~VgRl~~~Kg~~~LI~A~a~llk~~----pdirLvIVGdG~~~eeLk~la~elgL~  454 (578)
T PRK15490        380 SEVPHKIWQQFTQKTQDAD-TTIGGVFRFVGDKNPFAWIDFAARYLQHH----PATRFVLVGDGDLRAEAQKRAEQLGIL  454 (578)
T ss_pred             chhhHHHHHHhhhccCCCC-cEEEEEEEEehhcCHHHHHHHHHHHHhHC----CCeEEEEEeCchhHHHHHHHHHHcCCC
Confidence            4322233332  3444455 78899999999999999999999998888    8999999999988766654      34


Q ss_pred             CcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHH
Q 011355          348 TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKK  426 (488)
Q Consensus       348 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~  426 (488)
                      ++|+|+|+  .+++..+|+.+|++|+||. .||||++++|||+||+|||+++.||.+ |++.++.+|+++++ |++++++
T Consensus       455 d~V~FlG~--~~Dv~~~LaaADVfVlPS~-~EGfp~vlLEAMA~GlPVVATdvGG~~-EiV~dG~nG~LVp~~D~~aLa~  530 (578)
T PRK15490        455 ERILFVGA--SRDVGYWLQKMNVFILFSR-YEGLPNVLIEAQMVGVPVISTPAGGSA-ECFIEGVSGFILDDAQTVNLDQ  530 (578)
T ss_pred             CcEEECCC--hhhHHHHHHhCCEEEEccc-ccCccHHHHHHHHhCCCEEEeCCCCcH-HHcccCCcEEEECCCChhhHHH
Confidence            88999999  5699999999999999997 599999999999999999999999998 99999999999999 8888888


Q ss_pred             HH---HHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          427 AL---YGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       427 ~i---~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                      ++   ..+.++ .+....|++++++++.++|||+.++++|.++|..
T Consensus       531 ai~lA~aL~~l-l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~  575 (578)
T PRK15490        531 ACRYAEKLVNL-WRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS  575 (578)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence            76   444554 5556679999999999999999999999999964

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-38  Score=310.56  Aligned_cols=344  Identities=24%  Similarity=0.302  Sum_probs=262.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      |||++++..    ...||+++++..++++|.++||+|++++....                                .+.
T Consensus         1 MkIl~~~~~----~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~--------------------------------~~~   44 (365)
T cd03825           1 MKVLHLNTS----DISGGAARAAYRLHRALQAAGVDSTMLVQEKK--------------------------------ALI   44 (365)
T ss_pred             CeEEEEecC----CCCCcHHHHHHHHHHHHHhcCCceeEEEeecc--------------------------------hhh
Confidence            899999863    36699999999999999999999999997653                                111


Q ss_pred             HHhcCCCCCcEEEeCCcc-----hHHhhh--ccCCcEEEeeeCCcchhhhhhhhHhhhcC-------CCChhHH--HHHH
Q 011355          157 TQNSTGKPFDVIHTESVG-----LRHTRA--RNLTNVVVSWHGIAYETIHSDIIQELLRT-------PEEPQAY--ALAE  220 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~-----~~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~-------~~~~~~~--~~~~  220 (488)
                      ...... +||+||+|...     ...+..  .++| .++++|+.+....+.........+       +......  .+..
T Consensus        45 ~~~~~~-~~diih~~~~~~~~~~~~~~~~~~~~~~-~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (365)
T cd03825          45 SKIEII-NADIVHLHWIHGGFLSIEDLSKLLDRKP-VVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSR  122 (365)
T ss_pred             hChhcc-cCCEEEEEccccCccCHHHHHHHHcCCC-EEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHH
Confidence            111122 89999998621     112222  2667 999999876543221111000000       0000000  0111


Q ss_pred             HHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEe
Q 011355          221 RASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG  300 (488)
Q Consensus       221 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  300 (488)
                      ...+.... ......+.++++|++..+.+.+.++++..++.++|||+|.+.+.+..  ....++.+++++++ .++++.|
T Consensus       123 ~~~~~~~~-~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~--~~~~~~~~~~~~~~-~~i~~~~  198 (365)
T cd03825         123 WIWRRKRK-AWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRD--KREARKRLGLPADK-KIILFGA  198 (365)
T ss_pred             HHHHHHHH-HhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCc--HHHHHHHhCCCCCC-eEEEEEe
Confidence            11111110 12267788999999999999886667888999999999998775433  35677888888776 6666667


Q ss_pred             eecc--ccChHHHHHHHHHhHhh-ccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccC-HHHHHHHHHhcCEEEeCCC
Q 011355          301 RLVK--DKGHPLMFEALKQLLAE-NDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLD-QTRLAMFYNAIDIFVNPTL  376 (488)
Q Consensus       301 rl~~--~Kg~~~ll~a~~~l~~~-~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~-~~~l~~~~~~adv~v~ps~  376 (488)
                      +...  .||++.+++++..+.++ .    ++++++++|+++..... .+..+|.++|+++ ++++..+|+.||++++||.
T Consensus       199 ~~~~~~~K~~~~ll~a~~~l~~~~~----~~~~~~i~G~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~  273 (365)
T cd03825         199 VGGTDPRKGFDELIEALKRLAERWK----DDIELVVFGASDPEIPP-DLPFPVHYLGSLNDDESLALIYSAADVFVVPSL  273 (365)
T ss_pred             cCCCccccCHHHHHHHHHHhhhccC----CCeEEEEeCCCchhhhc-cCCCceEecCCcCCHHHHHHHHHhCCEEEeccc
Confidence            6654  89999999999999876 4    78999999988755432 4567899999998 8899999999999999997


Q ss_pred             CCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCC
Q 011355          377 RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFT  455 (488)
Q Consensus       377 ~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs  455 (488)
                       .||+|++++|||++|+|||+++.++.. |++.++.+|+++++ |++++++++.+++++ ++.+.++++++++.+.++||
T Consensus       274 -~e~~g~~~~Eam~~g~PvI~~~~~~~~-e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~s  350 (365)
T cd03825         274 -QENFPNTAIEALACGTPVVAFDVGGIP-DIVDHGVTGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARELAENEFD  350 (365)
T ss_pred             -cccccHHHHHHHhcCCCEEEecCCCCh-hheeCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcC
Confidence             599999999999999999999999998 88888889999998 999999999999998 88999999999999999999


Q ss_pred             HHHHHHHHHHHHHHh
Q 011355          456 ATKMAAAYERLFLCI  470 (488)
Q Consensus       456 ~~~~~~~~~~~~~~~  470 (488)
                      |++++++|.++|+++
T Consensus       351 ~~~~~~~~~~~y~~~  365 (365)
T cd03825         351 SRVQAKRYLSLYEEL  365 (365)
T ss_pred             HHHHHHHHHHHHhhC
Confidence            999999999999863

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>TIGR02470 sucr_synth sucrose synthase

Probab=100.00  E-value=1.7e-38  Score=320.31  Aligned_cols=377  Identities=16%  Similarity=0.175  Sum_probs=253.3

Q ss_pred             CCceEEEEEecCC----CC---CCCCCcHHHHHHHHHHHH--------HHCCC----eEEEEecCCCCCCCC--------
Q 011355           74 LKLLKIALFVKKW----PH---RSHAGGLERHALTLHLAL--------AKRGH----ELHIFTASCLNCSFP--------  126 (488)
Q Consensus        74 ~~~mkIl~i~~~~----p~---~~~~gG~~~~~~~l~~~L--------~~~G~----~V~v~~~~~~~~~~~--------  126 (488)
                      |+.|||++++.+.    ++   .+..||...|+.+++++|        +++||    +|+|+|...++....        
T Consensus       253 p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~  332 (784)
T TIGR02470       253 PMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEK  332 (784)
T ss_pred             CccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccc
Confidence            4569999999876    31   123699999999999985        68899    777999876533211        


Q ss_pred             CCCCceEE---EecCCCCc---cC------cchhHHHH-HHHHH-HhcC-CCCCcEEEeCCcc--hH---HhhhccCCcE
Q 011355          127 TYPISSLY---FHLSKPTA---AG------YLDQSIVW-QQLQT-QNST-GKPFDVIHTESVG--LR---HTRARNLTNV  186 (488)
Q Consensus       127 ~~~~~~i~---~~~~~~~~---~~------~~~~~~~~-~~~~~-~~~~-~~~~Dvv~~~~~~--~~---~~~~~~~p~~  186 (488)
                      ....+++.   ++......   ..      .|.+...+ ..+.. .... ..+||+||+|.+.  +.   .....++| .
T Consensus       333 ~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP-~  411 (784)
T TIGR02470       333 VYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVT-Q  411 (784)
T ss_pred             ccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCC-E
Confidence            12223333   33222110   01      11111111 11111 1111 1279999999632  22   22234678 8


Q ss_pred             EEeeeCCcchhhh-hhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHH----HHHH----------
Q 011355          187 VVSWHGIAYETIH-SDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGD----VLKR----------  251 (488)
Q Consensus       187 v~~~h~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~----~~~~----------  251 (488)
                      +.+.|........ .+.     ....  . ...+....++..+...++.||.||+.|.....    .+.+          
T Consensus       412 v~t~HsL~~~K~~~~g~-----~~~~--~-e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p  483 (784)
T TIGR02470       412 CTIAHALEKTKYPDSDI-----YWQE--F-EDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMP  483 (784)
T ss_pred             EEECCcchhhccccccc-----cccc--c-hhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhccccccc
Confidence            8999976322110 000     0000  0 11112222333344678999999999965422    2221          


Q ss_pred             -Hh----cC--CCCcEEEecCCccCCCcCCCcccc-----------------hhhhhhhCC--CCCCcEEEEEEeeeccc
Q 011355          252 -IY----MI--PEERVHVILNGVDEEVFKPDVAMG-----------------KDFKKKFGI--PENRSLVLGMAGRLVKD  305 (488)
Q Consensus       252 -~~----g~--~~~~i~vi~ngvd~~~~~~~~~~~-----------------~~~r~~~~i--~~~~~~~i~~~Grl~~~  305 (488)
                       .|    |+  +..|+.|||+|+|...|.+.....                 ...++.+|+  ++++ ++|+++||+.+.
T Consensus       484 ~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~k-piIl~VGRL~~~  562 (784)
T TIGR02470       484 GLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNK-PIIFSMARLDRV  562 (784)
T ss_pred             ceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCC-cEEEEEeCCCcc
Confidence             12    22  557999999999998776533211                 122466775  3444 678899999999


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc------hh---H---Hhh------hCCcEEEeCcc-CHHHHHHHHH
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW------GA---R---YRD------LGTNVIVLGPL-DQTRLAMFYN  366 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~------~~---~---~~~------l~~~V~~~g~v-~~~~l~~~~~  366 (488)
                      ||++.+++|+.++....    ++++|+|+|+++.      .+   +   +.+      +.++|.|+|.. +..++.++|.
T Consensus       563 KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr  638 (784)
T TIGR02470       563 KNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYR  638 (784)
T ss_pred             CCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHH
Confidence            99999999998876544    6799999997642      11   1   111      34799999975 5556666664


Q ss_pred             ----hcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHH----hcCHH
Q 011355          367 ----AIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIW----ADGRE  437 (488)
Q Consensus       367 ----~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll----~~~~~  437 (488)
                          .+|+||+||. .|+||++++|||+||+|||+|+.||.. |+|.++.+|+++++ |+++++++|.+++    .| ++
T Consensus       639 ~iAd~adVfV~PS~-~EpFGLvvLEAMAcGlPVVAT~~GG~~-EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~d-p~  715 (784)
T TIGR02470       639 YIADTKGIFVQPAL-YEAFGLTVLEAMTCGLPTFATRFGGPL-EIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDED-PS  715 (784)
T ss_pred             HhhccCcEEEECCc-ccCCCHHHHHHHHcCCCEEEcCCCCHH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC-HH
Confidence                3579999997 599999999999999999999999998 99999999999999 9999999999886    46 99


Q ss_pred             HHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          438 VLEKKGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       438 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                      .+++|++++++++.++|||+.+++++.++.
T Consensus       716 ~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~  745 (784)
T TIGR02470       716 YWQKISQGGLQRIYEKYTWKIYSERLLTLA  745 (784)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            999999999999999999999999998775

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=100.00  E-value=5e-39  Score=312.86  Aligned_cols=347  Identities=16%  Similarity=0.131  Sum_probs=248.7

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHH----H
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVW----Q  153 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~  153 (488)
                      ||++++..+    ..||+++++.++++.|.+.||+|++++............  .+..................+    .
T Consensus         1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~   74 (372)
T cd03792           1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTK--KFHNALQGADIELSEEEKEIYLEWNE   74 (372)
T ss_pred             CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHH--HhhHhhcCCCCCCCHHHHHHHHHHHH
Confidence            688998754    569999999999999999999999998765332111000  000000000000001111111    1


Q ss_pred             HHHHHhcCCCCCcEEEeCCcch---HHhhhc-cCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHh
Q 011355          154 QLQTQNSTGKPFDVIHTESVGL---RHTRAR-NLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEV  229 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~~~~---~~~~~~-~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      ..........+||+||+|+...   ...... +.| ++.+.|......             .    ......+.      
T Consensus        75 ~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~-~i~~~H~~~~~~-------------~----~~~~~~~~------  130 (372)
T cd03792          75 ENAERPLLDLDADVVVIHDPQPLALPLFKKKRGRP-WIWRCHIDLSSP-------------N----RRVWDFLQ------  130 (372)
T ss_pred             HHhccccccCCCCEEEECCCCchhHHHhhhcCCCe-EEEEeeeecCCC-------------c----HHHHHHHH------
Confidence            1111011122899999997542   222222 556 888888642110             0    11111111      


Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCc---CCCcccchhhhhhhCCCCCCcEEEEEEeeecccc
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVF---KPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK  306 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~---~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~K  306 (488)
                      +.++++|.+++.|..   .. . .+++..++ ++|||+|....   ...+......++++++++++ ++++++||+.+.|
T Consensus       131 ~~~~~~d~~i~~~~~---~~-~-~~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~vgrl~~~K  203 (372)
T cd03792         131 PYIEDYDAAVFHLPE---YV-P-PQVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPER-PYITQVSRFDPWK  203 (372)
T ss_pred             HHHHhCCEEeecHHH---hc-C-CCCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCC-cEEEEEecccccc
Confidence            345678998888832   22 2 24555555 99999997531   11222345678889988777 7889999999999


Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--------hHHh---hhCCcEEEeCcc--CHHHHHHHHHhcCEEEe
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--------ARYR---DLGTNVIVLGPL--DQTRLAMFYNAIDIFVN  373 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--------~~~~---~l~~~V~~~g~v--~~~~l~~~~~~adv~v~  373 (488)
                      |++.+++|++.+.++.    ++++|+++|+|+..        +.+.   .+.++|.|+|..  +.+++..+|+.||++++
T Consensus       204 g~~~ll~a~~~l~~~~----~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~  279 (372)
T cd03792         204 DPFGVIDAYRKVKERV----PDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQ  279 (372)
T ss_pred             CcHHHHHHHHHHHhhC----CCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEe
Confidence            9999999999998887    89999999998642        1111   134689999976  88999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhh
Q 011355          374 PTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNL  453 (488)
Q Consensus       374 ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~  453 (488)
                      ||. .||||++++|||+||+|||+++.++.. +++.++.+|++++ +.++++++|.+++++ ++.+++|++++++.+.++
T Consensus       280 ~s~-~Eg~g~~~lEA~a~G~Pvv~s~~~~~~-~~i~~~~~g~~~~-~~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~  355 (372)
T cd03792         280 KSI-REGFGLTVTEALWKGKPVIAGPVGGIP-LQIEDGETGFLVD-TVEEAAVRILYLLRD-PELRRKMGANAREHVREN  355 (372)
T ss_pred             CCC-ccCCCHHHHHHHHcCCCEEEcCCCCch-hhcccCCceEEeC-CcHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHH
Confidence            997 599999999999999999999999988 8889999999988 778899999999998 899999999999999889


Q ss_pred             CCHHHHHHHHHHHHHH
Q 011355          454 FTATKMAAAYERLFLC  469 (488)
Q Consensus       454 fs~~~~~~~~~~~~~~  469 (488)
                      |+|+.+++++.++|++
T Consensus       356 ~s~~~~~~~~~~~~~~  371 (372)
T cd03792         356 FLITRHLKDYLYLISK  371 (372)
T ss_pred             cCHHHHHHHHHHHHHh
Confidence            9999999999999976

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.4e-39  Score=312.86  Aligned_cols=328  Identities=23%  Similarity=0.307  Sum_probs=248.4

Q ss_pred             CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-CCCceEEEecCCCCccCcchhHHHHHHHHHHhcCCCCCcEEE
Q 011355           91 HAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-YPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIH  169 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~  169 (488)
                      ..||+++++.+++++|.++||+|++++.......... .+...+.+.....   ..+........+.....+. +||+||
T Consensus         8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~-~~dii~   83 (355)
T cd03819           8 ESGGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKLPFISK---NPLRILLNVARLRRLIREE-KVDIVH   83 (355)
T ss_pred             ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHhcCCeEEEcccccc---chhhhHHHHHHHHHHHHHc-CCCEEE
Confidence            5699999999999999999999999987532211111 1222222221111   1222222223333333333 899999


Q ss_pred             eCCcch-----HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChh
Q 011355          170 TESVGL-----RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDH  244 (488)
Q Consensus       170 ~~~~~~-----~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~  244 (488)
                      +|+...     ......++| ++.++|+.....                   .+..         ..+.++|.++++|+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~-------------------~~~~---------~~~~~~~~vi~~s~~  134 (355)
T cd03819          84 ARSRAPAWSAYLAARRTRPP-FVTTVHGFYSVN-------------------FRYN---------AIMARGDRVIAVSNF  134 (355)
T ss_pred             ECCCchhHHHHHHHHhcCCC-EEEEeCCchhhH-------------------HHHH---------HHHHhcCEEEEeCHH
Confidence            997321     112223567 899999853211                   0111         234678999999999


Q ss_pred             hHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccc---hhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhh
Q 011355          245 CGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG---KDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAE  321 (488)
Q Consensus       245 ~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~---~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~  321 (488)
                      ..+.+.+.++++..++.++|||+|...+.+.....   ..++++++++++. ++++++||+.+.||++.+++++..+.++
T Consensus       135 ~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Gr~~~~Kg~~~li~~~~~l~~~  213 (355)
T cd03819         135 IADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGK-PVILLPGRLTRWKGQEVFIEALARLKKD  213 (355)
T ss_pred             HHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCc-eEEEEeeccccccCHHHHHHHHHHHHhc
Confidence            99999977899889999999999998776543221   1256777776666 8899999999999999999999999988


Q ss_pred             ccCCCCCeEEEEEeCCCchhHH--------h--hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHc
Q 011355          322 NDTFRRSTVFLVAGDGPWGARY--------R--DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLS  391 (488)
Q Consensus       322 ~~~~~~~~~l~ivG~g~~~~~~--------~--~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~  391 (488)
                      .    ++++++++|+++..+.+        +  .+.++|.|+|+  .+++.++|+.||++++||.+.||+|++++|||++
T Consensus       214 ~----~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~  287 (355)
T cd03819         214 D----PDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAM  287 (355)
T ss_pred             C----CCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhc
Confidence            7    89999999988654333        1  23478999999  6699999999999999995469999999999999


Q ss_pred             CCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHH
Q 011355          392 GKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKM  459 (488)
Q Consensus       392 G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~  459 (488)
                      |+|||+++.++.. |++.++.+|+++++ |+++++++|..++..+++.+.+++++|++.+.++|+|+.+
T Consensus       288 G~PvI~~~~~~~~-e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~~  355 (355)
T cd03819         288 GRPVIASDHGGAR-ETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM  355 (355)
T ss_pred             CCCEEEcCCCCcH-HHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence            9999999999987 89999889999998 9999999997666644999999999999999999999864

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=100.00  E-value=2.3e-38  Score=307.61  Aligned_cols=345  Identities=22%  Similarity=0.293  Sum_probs=258.1

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceE-EEecCCCCccCcchhHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSL-YFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      ||+++++.+    ..||+++.+.+++++|.++||+|++++................ ......    ........+..+.
T Consensus         1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   72 (360)
T cd04951           1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATIILNLNMSK----NPLSFLLALWKLR   72 (360)
T ss_pred             CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchhhccceEEecccc----cchhhHHHHHHHH
Confidence            578887643    6799999999999999999999999987653322211111111 111111    1122222223333


Q ss_pred             HHhcCCCCCcEEEeCCcchH--H----hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhh
Q 011355          157 TQNSTGKPFDVIHTESVGLR--H----TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVK  230 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~~--~----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (488)
                      +..+.. +||+||+|.....  .    ......+ ++.+.|+....                   ........+.     
T Consensus        73 ~~~~~~-~pdiv~~~~~~~~~~~~l~~~~~~~~~-~v~~~h~~~~~-------------------~~~~~~~~~~-----  126 (360)
T cd04951          73 KILRQF-KPDVVHAHMFHANIFARLLRLFLPSPP-LICTAHSKNEG-------------------GRLRMLAYRL-----  126 (360)
T ss_pred             HHHHhc-CCCEEEEcccchHHHHHHHHhhCCCCc-EEEEeeccCch-------------------hHHHHHHHHH-----
Confidence            333333 8999999974321  1    1112334 88888874211                   1111111111     


Q ss_pred             hcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHH
Q 011355          231 FFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL  310 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~  310 (488)
                      ....++.++++|+...+.+.+..+++.+++.++|||+|...+.+.......+++++++++++ ++++++|++.+.||++.
T Consensus       127 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~kg~~~  205 (360)
T cd04951         127 TDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDT-FVILAVGRLVEAKDYPN  205 (360)
T ss_pred             HhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCC-EEEEEEeeCchhcCcHH
Confidence            12346777889999999998865677889999999999888776555556788888887776 88999999999999999


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      +++++.++.++.    ++++|+|+|+|+..+.+++      +.++|.++|+.  +++.++|+.||++++||.. ||+|++
T Consensus       206 li~a~~~l~~~~----~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~-e~~~~~  278 (360)
T cd04951         206 LLKAFAKLLSDY----LDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFVLSSAW-EGFGLV  278 (360)
T ss_pred             HHHHHHHHHhhC----CCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEEecccc-cCCChH
Confidence            999999998888    8999999999987765544      34789999985  5899999999999999975 999999


Q ss_pred             HHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          385 VLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      ++|||++|+|||+++.++.. |++.+  +|+++++ |+++++++|.++++++++.+..++++ ++.+.++|||+.++++|
T Consensus       279 ~~Ea~a~G~PvI~~~~~~~~-e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~  354 (360)
T cd04951         279 VAEAMACELPVVATDAGGVR-EVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQW  354 (360)
T ss_pred             HHHHHHcCCCEEEecCCChh-hEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHH
Confidence            99999999999999999988 77765  7888888 99999999999996647777777766 88888999999999999


Q ss_pred             HHHHH
Q 011355          464 ERLFL  468 (488)
Q Consensus       464 ~~~~~  468 (488)
                      .++|+
T Consensus       355 ~~~y~  359 (360)
T cd04951         355 LTLYT  359 (360)
T ss_pred             HHHhh
Confidence            99996

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.5e-38  Score=313.34  Aligned_cols=352  Identities=22%  Similarity=0.246  Sum_probs=256.1

Q ss_pred             CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC-CCCCceEEEecCCCC--cc----Ccchh-HHHHHHHHHHhcCC
Q 011355           91 HAGGLERHALTLHLALAKRGHELHIFTASCLNCSFP-TYPISSLYFHLSKPT--AA----GYLDQ-SIVWQQLQTQNSTG  162 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~i~~~~~~~~--~~----~~~~~-~~~~~~~~~~~~~~  162 (488)
                      ..||+++++.+|+++|++.||+|+|++......... .....++.+......  ..    ..+.. ......+.......
T Consensus        19 ~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (398)
T cd03800          19 DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRRE   98 (398)
T ss_pred             CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999765433221 112223333221110  00    01111 11122222222221


Q ss_pred             -CCCcEEEeCCcc--h---HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCcc
Q 011355          163 -KPFDVIHTESVG--L---RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYA  236 (488)
Q Consensus       163 -~~~Dvv~~~~~~--~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (488)
                       .+||+||+|...  .   ......++| ++.+.|+..........       ..     ...........+...++.+|
T Consensus        99 ~~~~Div~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~~~~~ad  165 (398)
T cd03800          99 GGRPDLIHAHYWDSGLVALLLARRLGIP-LVHTFHSLGAVKRRHLG-------AA-----DTYEPARRIEAEERLLRAAD  165 (398)
T ss_pred             CCCccEEEEecCccchHHHHHHhhcCCc-eEEEeecccccCCcccc-------cc-----cccchhhhhhHHHHHHhhCC
Confidence             279999998632  1   112223556 88899975432110000       00     00000111122235678999


Q ss_pred             EEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHH
Q 011355          237 HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK  316 (488)
Q Consensus       237 ~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~  316 (488)
                      .++++|+...+.+.+.++.+..++.+|+||+|.+.+.+.... ...++.++.+.++ ++++++||+.+.||++.+++++.
T Consensus       166 ~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~-~~~~~~~~~~~~~-~~i~~~gr~~~~k~~~~ll~a~~  243 (398)
T cd03800         166 RVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRA-EARRARLLRDPDK-PRILAVGRLDPRKGIDTLIRAYA  243 (398)
T ss_pred             EEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccch-hhHHHhhccCCCC-cEEEEEcccccccCHHHHHHHHH
Confidence            999999999999998776666779999999998877654332 2225556666555 88999999999999999999999


Q ss_pred             HhHhhccCCCCCeEEEEEeCCCchh------H----Hh--hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          317 QLLAENDTFRRSTVFLVAGDGPWGA------R----YR--DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       317 ~l~~~~~~~~~~~~l~ivG~g~~~~------~----~~--~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      .+.++.    ++++++++|+++...      .    .+  ++.++|.|+|+++.+++..+|+.||++++||. .|++|++
T Consensus       244 ~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~-~e~~~~~  318 (398)
T cd03800         244 ELPELR----ERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPAL-YEPFGLT  318 (398)
T ss_pred             HHHHhC----CCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEeccc-ccccCcH
Confidence            999887    899999999875421      1    11  13478999999999999999999999999997 5999999


Q ss_pred             HHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          385 VLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      ++|||++|+|||+++.++.. +++.++++|+++++ |+++++++|.+++++ ++.+++|++++++.+.++|||+.++++|
T Consensus       319 l~Ea~a~G~Pvi~s~~~~~~-e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~  396 (398)
T cd03800         319 ALEAMACGLPVVATAVGGPR-DIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYTWERVAARL  396 (398)
T ss_pred             HHHHHhcCCCEEECCCCCHH-HHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            99999999999999999987 89999999999998 999999999999998 9999999999999998999999999987


Q ss_pred             H
Q 011355          464 E  464 (488)
Q Consensus       464 ~  464 (488)
                      .
T Consensus       397 ~  397 (398)
T cd03800         397 L  397 (398)
T ss_pred             h
Confidence            5

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4e-38  Score=306.32  Aligned_cols=349  Identities=20%  Similarity=0.225  Sum_probs=247.6

Q ss_pred             EEEEEecC-CCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCc-cCcchhHHHHHHH
Q 011355           78 KIALFVKK-WPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTA-AGYLDQSIVWQQL  155 (488)
Q Consensus        78 kIl~i~~~-~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~  155 (488)
                      ||++++.. +|+  ..||+++++.+++++|.++||+|+|++........ .....++.+....... .........+..+
T Consensus         1 ~i~~i~~~~~~~--~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~   77 (363)
T cd04955           1 KIAIIGTRGIPA--KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK-ETEYNGVRLIHIPAPEIGGLGTIIYDILAI   77 (363)
T ss_pred             CeEEEecCcCCc--ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc-ccccCCceEEEcCCCCccchhhhHHHHHHH
Confidence            68999654 565  78999999999999999999999999987543331 1122233332221110 0111111111112


Q ss_pred             HHHhcCCCCCcEEEeCCcch--H--HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          156 QTQNSTGKPFDVIHTESVGL--R--HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       156 ~~~~~~~~~~Dvv~~~~~~~--~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ........++|++|......  .  .....+.| ++++.|+..+...           ........+.....     ...
T Consensus        78 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~~-----------~~~~~~~~~~~~~~-----~~~  140 (363)
T cd04955          78 LHALFVKRDIDHVHALGPAIAPFLPLLRLKGKK-VVVNMDGLEWKRA-----------KWGRPAKRYLKFGE-----KLA  140 (363)
T ss_pred             HHHHhccCCeEEEEecCccHHHHHHHHHhcCCC-EEEEccCcceeec-----------ccccchhHHHHHHH-----HHH
Confidence            22211222666666654331  1  11222456 8999998533210           00001111222111     235


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM  311 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~l  311 (488)
                      ++.+|.++++|+..++.+.+.+|.+.   .+||||+|...+..    ....+++++++++.  .++++||+.+.||++.+
T Consensus       141 ~~~ad~ii~~s~~~~~~~~~~~~~~~---~~i~ngv~~~~~~~----~~~~~~~~~~~~~~--~i~~~G~~~~~Kg~~~l  211 (363)
T cd04955         141 VKFADRLIADSPGIKEYLKEKYGRDS---TYIPYGADHVVSSE----EDEILKKYGLEPGR--YYLLVGRIVPENNIDDL  211 (363)
T ss_pred             HhhccEEEeCCHHHHHHHHHhcCCCC---eeeCCCcChhhcch----hhhhHHhcCCCCCc--EEEEEecccccCCHHHH
Confidence            67899999999999999977787543   89999999876544    12345556655443  56799999999999999


Q ss_pred             HHHHHHhHhhccCCCCCeEEEEEeCCCchhH----Hh---hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          312 FEALKQLLAENDTFRRSTVFLVAGDGPWGAR----YR---DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       312 l~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~----~~---~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      ++|++++.       .+++|+++|+|+....    ++   .+.++|+++|+++++++..+|.+||++++||...||||++
T Consensus       212 i~a~~~l~-------~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~  284 (363)
T cd04955         212 IEAFSKSN-------SGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPS  284 (363)
T ss_pred             HHHHHhhc-------cCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChH
Confidence            99998874       4689999999854322    22   2348999999999999999999999999999755999999


Q ss_pred             HHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          385 VLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      ++|||+||+|||+++.++.. |++.+  +|.++++ |.  ++++|.+++++ ++.+.++++++++.+.++|||+.+++++
T Consensus       285 ~~EAma~G~PvI~s~~~~~~-e~~~~--~g~~~~~~~~--l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~  358 (363)
T cd04955         285 LLEAMAYGCPVLASDNPFNR-EVLGD--KAIYFKVGDD--LASLLEELEAD-PEEVSAMAKAARERIREKYTWEKIADQY  358 (363)
T ss_pred             HHHHHHcCCCEEEecCCccc-eeecC--CeeEecCchH--HHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            99999999999999999987 77654  7888886 43  99999999999 8999999999999999999999999999


Q ss_pred             HHHHH
Q 011355          464 ERLFL  468 (488)
Q Consensus       464 ~~~~~  468 (488)
                      .++|+
T Consensus       359 ~~~y~  363 (363)
T cd04955         359 EELYK  363 (363)
T ss_pred             HHHhC
Confidence            99884

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=8.5e-39  Score=311.49  Aligned_cols=346  Identities=24%  Similarity=0.268  Sum_probs=253.9

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccC-cc--hhHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAG-YL--DQSIVWQQ  154 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~  154 (488)
                      ||+++++.|||.     .++++.++++.|.  ||+|++++...............+........... .+  ........
T Consensus         1 ~~~~~~~~~~~~-----~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (367)
T cd05844           1 RVLIFRPLLLAP-----SETFVRNQAEALR--RFRPVYVGGRRLGPAPLGALAVRLADLAGGKAGLRLGALRLLTGSAPQ   73 (367)
T ss_pred             CEEEEeCCCCCC-----chHHHHHHHHhcc--cCCcEEEEeeccCCCCCcccceeeeecccchhHHHHHHHHhccccccH
Confidence            588999887662     7899999999994  78888888765444332222222222211100000 00  00000111


Q ss_pred             HHHHhcCCCCCcEEEeCCcc--h---HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHh
Q 011355          155 LQTQNSTGKPFDVIHTESVG--L---RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEV  229 (488)
Q Consensus       155 ~~~~~~~~~~~Dvv~~~~~~--~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      +....++. +||+||+|...  .   ......++| ++++.|+..........      ... .  .......     +.
T Consensus        74 ~~~~~~~~-~~dvvh~~~~~~~~~~~~~~~~~~~p-~i~~~h~~~~~~~~~~~------~~~-~--~~~~~~~-----~~  137 (367)
T cd05844          74 LRRLLRRH-RPDLVHAHFGFDGVYALPLARRLGVP-LVVTFHGFDATTSLALL------LRS-R--WALYARR-----RR  137 (367)
T ss_pred             HHHHHHhh-CCCEEEeccCchHHHHHHHHHHcCCC-EEEEEeCccccccchhh------ccc-c--hhHHHHH-----HH
Confidence            11122222 89999998532  1   122334567 99999975322110000      000 0  1111111     11


Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChH
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHP  309 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~  309 (488)
                      ..++++|.++++|+..++.+.+ +|+++.++.+++||+|.+.+.+...            ..++..++++|++.+.||++
T Consensus       138 ~~~~~~d~ii~~s~~~~~~~~~-~~~~~~~i~vi~~g~d~~~~~~~~~------------~~~~~~i~~~G~~~~~K~~~  204 (367)
T cd05844         138 RLARRAALFIAVSQFIRDRLLA-LGFPPEKVHVHPIGVDTAKFTPATP------------ARRPPRILFVGRFVEKKGPL  204 (367)
T ss_pred             HHHHhcCEEEECCHHHHHHHHH-cCCCHHHeEEecCCCCHHhcCCCCC------------CCCCcEEEEEEeeccccChH
Confidence            4567899999999999999988 6888889999999999877654321            12236889999999999999


Q ss_pred             HHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC-----C
Q 011355          310 LMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR-----A  378 (488)
Q Consensus       310 ~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~-----~  378 (488)
                      .+++|+..+.++.    ++++|+++|+|+..+.+++      +.++|+|+|+++.+++..+|+.||++++||..     .
T Consensus       205 ~li~a~~~l~~~~----~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~  280 (367)
T cd05844         205 LLLEAFARLARRV----PEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDA  280 (367)
T ss_pred             HHHHHHHHHHHhC----CCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCc
Confidence            9999999999887    8999999999887665543      35789999999999999999999999999962     4


Q ss_pred             CCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHH
Q 011355          379 QGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTAT  457 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~  457 (488)
                      ||+|++++|||+||+|||+++.++.. |++.++++|+++++ |+++++++|.+++++ ++.+.+|++++++++.++|||+
T Consensus       281 E~~~~~~~EA~a~G~PvI~s~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~  358 (367)
T cd05844         281 EGLPVVLLEAQASGVPVVATRHGGIP-EAVEDGETGLLVPEGDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLR  358 (367)
T ss_pred             cCCchHHHHHHHcCCCEEEeCCCCch-hheecCCeeEEECCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHH
Confidence            89999999999999999999999988 88899999999998 999999999999998 8999999999999999999999


Q ss_pred             HHHHHHHH
Q 011355          458 KMAAAYER  465 (488)
Q Consensus       458 ~~~~~~~~  465 (488)
                      .+++++.+
T Consensus       359 ~~~~~l~~  366 (367)
T cd05844         359 RQTAKLEA  366 (367)
T ss_pred             HHHHHHhc
Confidence            99999875

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=1.7e-38  Score=311.52  Aligned_cols=362  Identities=20%  Similarity=0.230  Sum_probs=253.6

Q ss_pred             EEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-----CCCceEEEecC---------------
Q 011355           79 IALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-----YPISSLYFHLS---------------  138 (488)
Q Consensus        79 Il~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-----~~~~~i~~~~~---------------  138 (488)
                      ||++++.+|.++..|| ...+++++++|++. |+|++++..........     .....+.....               
T Consensus         1 iL~~~~~~P~P~~~G~-~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (397)
T TIGR03087         1 ILYLVHRIPYPPNKGD-KIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSLLGLLT   78 (397)
T ss_pred             CeeecCCCCCCCCCCC-cEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHHhhhcC
Confidence            6889988776655555 77888999999876 99999998754332211     00111111110               


Q ss_pred             -CCCccCcchhHHHHHHHHHHhcCCCCCcEEEeCCcchHHhhh---ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChh
Q 011355          139 -KPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRA---RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQ  214 (488)
Q Consensus       139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  214 (488)
                       .+.....+......+.+.....+. ++|+||+++..+..+..   .+.| .+...|+.....+..     .........
T Consensus        79 ~~p~~~~~~~~~~~~~~l~~~~~~~-~~D~v~~~~~~~~~~~~~~~~~~p-~i~~~~d~~~~~~~~-----~~~~~~~~~  151 (397)
T TIGR03087        79 GEPLSLPYYRSRRLARWVNALLAAE-PVDAIVVFSSAMAQYVTPHVRGVP-RIVDFVDVDSDKWLQ-----YARTKRWPL  151 (397)
T ss_pred             CCCCcchhhCCHHHHHHHHHHHhhC-CCCEEEEeccccceeccccccCCC-eEeehhhHHHHHHHH-----HHhccCcch
Confidence             000001111122333333333333 89999999765443332   3567 888888764332211     111111111


Q ss_pred             HHHHHH---HHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCC
Q 011355          215 AYALAE---RASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPEN  291 (488)
Q Consensus       215 ~~~~~~---~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~  291 (488)
                       +.++.   .... ..+...++++|.++++|+..++.+.+.++.+..++.+||||+|.+.|.+......      .++.+
T Consensus       152 -~~~~~~~~~~~~-~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~------~~~~~  223 (397)
T TIGR03087       152 -RWIYRREGRLLL-AYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPN------PYPPG  223 (397)
T ss_pred             -hHHHHHHHHHHH-HHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccC------CCCCC
Confidence             12221   1111 1234677999999999999999998865556679999999999988765432111      12233


Q ss_pred             CcEEEEEEeeeccccChHHHH----HHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh--CCcEEEeCccCHHHHHHHH
Q 011355          292 RSLVLGMAGRLVKDKGHPLMF----EALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL--GTNVIVLGPLDQTRLAMFY  365 (488)
Q Consensus       292 ~~~~i~~~Grl~~~Kg~~~ll----~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l--~~~V~~~g~v~~~~l~~~~  365 (488)
                      + .+++|+|++.+.||++.++    +++..+.++.    |+++|+|+|+|+.. .++++  .++|+|+|+++  ++..+|
T Consensus       224 ~-~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~----p~~~l~ivG~g~~~-~~~~l~~~~~V~~~G~v~--~~~~~~  295 (397)
T TIGR03087       224 K-RVLVFTGAMDYWPNIDAVVWFAERVFPAVRARR----PAAEFYIVGAKPSP-AVRALAALPGVTVTGSVA--DVRPYL  295 (397)
T ss_pred             C-cEEEEEEecCCccCHHHHHHHHHHHHHHHHHHC----CCcEEEEECCCChH-HHHHhccCCCeEEeeecC--CHHHHH
Confidence            3 6788999999999999887    5566677777    89999999998864 34443  37899999987  799999


Q ss_pred             HhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011355          366 NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLV  445 (488)
Q Consensus       366 ~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~  445 (488)
                      +.||++|+||...||+|++++|||+||+|||+|+.++ . .+...+++|++++.|+++++++|.++++| ++.+++|+++
T Consensus       296 ~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~-~i~~~~~~g~lv~~~~~~la~ai~~ll~~-~~~~~~~~~~  372 (397)
T TIGR03087       296 AHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-E-GIDALPGAELLVAADPADFAAAILALLAN-PAEREELGQA  372 (397)
T ss_pred             HhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-c-cccccCCcceEeCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence            9999999999756999999999999999999999754 2 33445567888866999999999999998 9999999999


Q ss_pred             HHHHHhhhCCHHHHHHHHHHHHH
Q 011355          446 ARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       446 a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      +++++.++|||+.+++++.++|.
T Consensus       373 ar~~v~~~fsw~~~~~~~~~~l~  395 (397)
T TIGR03087       373 ARRRVLQHYHWPRNLARLDALLE  395 (397)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHhc
Confidence            99999999999999999999885

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.3e-38  Score=306.64  Aligned_cols=356  Identities=24%  Similarity=0.271  Sum_probs=263.3

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCC-CccCcchhHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKP-TAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~  156 (488)
                      ||++++..|||  ..||.+.++..++++|.++||+|++++...........  ....+..... ...........+..+.
T Consensus         1 kIl~i~~~~~p--~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (364)
T cd03814           1 RIAIVTDTFLP--QVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA--RVVPVPSVPLPGYPEIRLALPPRRRVR   76 (364)
T ss_pred             CeEEEecccCc--cccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC--CceeecccccCcccceEecccchhhHH
Confidence            69999999987  56999999999999999999999999987643322211  1111111100 0000000011122222


Q ss_pred             HHhcCCCCCcEEEeCCcch------HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhh
Q 011355          157 TQNSTGKPFDVIHTESVGL------RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVK  230 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~------~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (488)
                      ...+.. +||+||+++...      ......++| ++..+|+........        ... .........+.+     .
T Consensus        77 ~~~~~~-~pdii~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~-----~  140 (364)
T cd03814          77 RLLDAF-APDVVHIATPGPLGLAALRAARRLGIP-VVTSYHTDFPEYLRY--------YGL-GPLSWLAWAYLR-----W  140 (364)
T ss_pred             HHHHhc-CCCEEEEeccchhhHHHHHHHHHcCCC-EEEEEecChHHHhhh--------ccc-chHhHhhHHHHH-----H
Confidence            222222 899999986422      122234567 888899754322110        000 011111111111     4


Q ss_pred             hcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHH
Q 011355          231 FFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL  310 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~  310 (488)
                      +++++|.++++|+...+.+.+ .  ...++.+++||+|...+.+.... ...+++++ +.++ ++++++|++.+.||++.
T Consensus       141 ~~~~~d~i~~~s~~~~~~~~~-~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~-~~~~-~~i~~~G~~~~~k~~~~  214 (364)
T cd03814         141 FHNRADRVLVPSPSLADELRA-R--GFRRVRLWPRGVDTELFHPRRRD-EALRARLG-PPDR-PVLLYVGRLAPEKNLEA  214 (364)
T ss_pred             HHHhCCEEEeCCHHHHHHHhc-c--CCCceeecCCCccccccCccccc-HHHHHHhC-CCCC-eEEEEEeccccccCHHH
Confidence            567899999999999986655 3  34689999999999877654332 34455555 3333 78999999999999999


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHH
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAML  390 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma  390 (488)
                      +++++..+.++     ++++++++|+|+..+.++...++|.+.|+++.+++.++|+.||++++||. .|++|++++|||+
T Consensus       215 ~i~~~~~l~~~-----~~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~-~e~~~~~~lEa~a  288 (364)
T cd03814         215 LLDADLPLRRR-----PPVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSR-TETFGLVVLEAMA  288 (364)
T ss_pred             HHHHHHHhhhc-----CCceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECcc-cccCCcHHHHHHH
Confidence            99999998754     47999999999888777767789999999999999999999999999997 5999999999999


Q ss_pred             cCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          391 SGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       391 ~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      ||+|||+++.++.. +++.++++|+++++ |.++++++|.+++++ ++.+.+|++++++.+ ++|+|+.+++++.++|+
T Consensus       289 ~g~PvI~~~~~~~~-~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  364 (364)
T cd03814         289 SGLPVVAPDAGGPA-DIVTDGENGLLVEPGDAEAFAAALAALLAD-PELRRRMAARARAEA-ERRSWEAFLDNLLEAYR  364 (364)
T ss_pred             cCCCEEEcCCCCch-hhhcCCcceEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH-hhcCHHHHHHHHHHhhC
Confidence            99999999999987 88888899999999 999999999999999 999999999999999 66999999999998873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.6e-38  Score=305.90  Aligned_cols=341  Identities=26%  Similarity=0.318  Sum_probs=249.6

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCCCccCcchhHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKPTAAGYLDQSIVWQQL  155 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      ||++++..|||  ..||.++++.+++++|.++||+|++++..........  ............. ..........+..+
T Consensus         1 kil~i~~~~~p--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   77 (357)
T cd03795           1 RVLHVGKFYPP--DRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEERNGHRVIRAPSLLN-VASTPFSPSFFKQL   77 (357)
T ss_pred             CeeEecCCCCC--CCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhhhccCceEEEeecccc-cccccccHHHHHHH
Confidence            78999988887  4899999999999999999999999998764433221  1111111111110 00000111111111


Q ss_pred             HHHhcCCCCCcEEEeCCcch----HHhhh-ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhh
Q 011355          156 QTQNSTGKPFDVIHTESVGL----RHTRA-RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVK  230 (488)
Q Consensus       156 ~~~~~~~~~~Dvv~~~~~~~----~~~~~-~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (488)
                      .  .... +||+||+|....    ..... .+.| .+.++|+.....               .........+.+     +
T Consensus        78 ~--~~~~-~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~---------------~~~~~~~~~~~~-----~  133 (357)
T cd03795          78 K--KLAK-KADVIHLHFPNPLADLALLLLPRKKP-VVVHWHSDIVKQ---------------KLLLKLYRPLQR-----R  133 (357)
T ss_pred             H--hcCC-CCCEEEEecCcchHHHHHHHhccCce-EEEEEcChhhcc---------------chhhhhhhHHHH-----H
Confidence            1  1122 899999986421    11111 2445 888888632110               000111222211     3


Q ss_pred             hcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHH
Q 011355          231 FFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL  310 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~  310 (488)
                      +++++|.++++|+...+.+...++. ..++.++|||+|...+.+......   .....+.++ ++++++|++.+.||++.
T Consensus       134 ~~~~~d~vi~~s~~~~~~~~~~~~~-~~~~~~i~~gi~~~~~~~~~~~~~---~~~~~~~~~-~~i~~~G~~~~~K~~~~  208 (357)
T cd03795         134 FLRRADAIVATSPNYAETSPVLRRF-RDKVRVIPLGLDPARYPRPDALEE---AIWRRAAGR-PFFLFVGRLVYYKGLDV  208 (357)
T ss_pred             HHHhcCEEEeCcHHHHHHHHHhcCC-ccceEEecCCCChhhcCCcchhhh---HhhcCCCCC-cEEEEecccccccCHHH
Confidence            5688999999999999988875544 378999999999987765432211   122223344 78999999999999999


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCC-CCCCCCh
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTL-RAQGLDH  383 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~-~~eg~~~  383 (488)
                      +++|++++        .+++++|+|+|+..+.+++      +.++|+|+|+++++++..+|+.||++++||. ..|++|+
T Consensus       209 li~a~~~l--------~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~  280 (357)
T cd03795         209 LLEAAAAL--------PDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGI  280 (357)
T ss_pred             HHHHHHhc--------cCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccch
Confidence            99999987        4689999999987765554      3479999999999999999999999999996 3599999


Q ss_pred             HHHHHHHcCCcEEEeCCCCcccceeec-CCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHH
Q 011355          384 TVLEAMLSGKPLMATRLASIVGSVIVG-TDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMA  460 (488)
Q Consensus       384 ~~lEAma~G~PVI~~~~~~~~~e~v~~-~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~  460 (488)
                      +++|||++|+|||+++.++.. +.+.+ +++|+++++ |+++++++|.+++++ ++.+++|++++++.+.++|||++++
T Consensus       281 ~~~Ea~~~g~Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~  357 (357)
T cd03795         281 VLLEAMAFGKPVISTEIGTGG-SYVNLHGVTGLVVPPGDPAALAEAIRRLLED-PELRERLGEAARERAEEEFTADRMV  357 (357)
T ss_pred             HHHHHHHcCCCEEecCCCCch-hHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHhcchHhhC
Confidence            999999999999999999988 66665 899999998 999999999999999 9999999999999999999999864

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.1e-38  Score=302.70  Aligned_cols=324  Identities=22%  Similarity=0.275  Sum_probs=240.2

Q ss_pred             eEEEEEecCCC--CCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHH
Q 011355           77 LKIALFVKKWP--HRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQ  154 (488)
Q Consensus        77 mkIl~i~~~~p--~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      |||+++++.+.  ++...||+++++..|+++|.++||+|++++......................  ..........+..
T Consensus         1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   78 (335)
T cd03802           1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDA--PGRDRAEAEALAL   78 (335)
T ss_pred             CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeeccCCCccccc--chhhHhhHHHHHH
Confidence            89999998762  1348999999999999999999999999998764322111000000000000  0011122223333


Q ss_pred             HHHHhcCCCCCcEEEeCCcchH--HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhc
Q 011355          155 LQTQNSTGKPFDVIHTESVGLR--HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFF  232 (488)
Q Consensus       155 ~~~~~~~~~~~Dvv~~~~~~~~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (488)
                      +....+.. +||+||+|+....  .....+.| ++.+.|+......                 ..          .....
T Consensus        79 ~~~~~~~~-~~Divh~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~~-----------------~~----------~~~~~  129 (335)
T cd03802          79 AERALAAG-DFDIVHNHSLHLPLPFARPLPVP-VVTTLHGPPDPEL-----------------LK----------LYYAA  129 (335)
T ss_pred             HHHHHhcC-CCCEEEecCcccchhhhcccCCC-EEEEecCCCCccc-----------------ch----------HHHhh
Confidence            33444443 8999999975433  23334556 9999998643211                 00          01334


Q ss_pred             CCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHH
Q 011355          233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMF  312 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll  312 (488)
                      ...+.++++|+...+.+...     .++.+||||+|.+.+.+..             .++ ..++++||+.+.||++.++
T Consensus       130 ~~~~~~~~~s~~~~~~~~~~-----~~~~vi~ngvd~~~~~~~~-------------~~~-~~i~~~Gr~~~~Kg~~~li  190 (335)
T cd03802         130 RPDVPFVSISDAQRRPWPPL-----PWVATVHNGIDLDDYPFRG-------------PKG-DYLLFLGRISPEKGPHLAI  190 (335)
T ss_pred             CcCCeEEEecHHHHhhcccc-----cccEEecCCcChhhCCCCC-------------CCC-CEEEEEEeeccccCHHHHH
Confidence            67788999999988876541     7899999999998776521             223 5788999999999999999


Q ss_pred             HHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh-------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHH
Q 011355          313 EALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTV  385 (488)
Q Consensus       313 ~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~  385 (488)
                      ++++.         .+++|+++|.|+..+....       +.++|+|+|+++++++..+|+.+|++++||...|+||+++
T Consensus       191 ~~~~~---------~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~  261 (335)
T cd03802         191 RAARR---------AGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVM  261 (335)
T ss_pred             HHHHh---------cCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHH
Confidence            98653         4789999999876543332       2589999999999999999999999999997569999999


Q ss_pred             HHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 011355          386 LEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYER  465 (488)
Q Consensus       386 lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~  465 (488)
                      +|||+||+|||+++.|+.. |++.++.+|++++ ++++++++|.++.+. +      .+++++.+.++|||+.++++|.+
T Consensus       262 lEAma~G~PvI~~~~~~~~-e~i~~~~~g~l~~-~~~~l~~~l~~l~~~-~------~~~~~~~~~~~~s~~~~~~~~~~  332 (335)
T cd03802         262 IEAMACGTPVIAFRRGAVP-EVVEDGVTGFLVD-SVEELAAAVARADRL-D------RAACRRRAERRFSAARMVDDYLA  332 (335)
T ss_pred             HHHHhcCCCEEEeCCCCch-hheeCCCcEEEeC-CHHHHHHHHHHHhcc-H------HHHHHHHHHHhCCHHHHHHHHHH
Confidence            9999999999999999998 8999999999999 599999999998765 2      24677888899999999999999


Q ss_pred             HHH
Q 011355          466 LFL  468 (488)
Q Consensus       466 ~~~  468 (488)
                      +|+
T Consensus       333 ~y~  335 (335)
T cd03802         333 LYR  335 (335)
T ss_pred             HhC
Confidence            984

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.9e-38  Score=316.72  Aligned_cols=378  Identities=21%  Similarity=0.246  Sum_probs=258.3

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-------------------------CCCce
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-------------------------YPISS  132 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-------------------------~~~~~  132 (488)
                      ||+++++.+.|....||.+.++..|+++|++.||+|.|+++.........                         ....+
T Consensus         1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   80 (476)
T cd03791           1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG   80 (476)
T ss_pred             CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence            69999998766678999999999999999999999999998754332110                         01112


Q ss_pred             EEEecCCCCc------------cCcch----hHHHHHHHHHH-hcCCCCCcEEEeCCcc---hHHhhh--------ccCC
Q 011355          133 LYFHLSKPTA------------AGYLD----QSIVWQQLQTQ-NSTGKPFDVIHTESVG---LRHTRA--------RNLT  184 (488)
Q Consensus       133 i~~~~~~~~~------------~~~~~----~~~~~~~~~~~-~~~~~~~Dvv~~~~~~---~~~~~~--------~~~p  184 (488)
                      +.+.......            ....+    +.......... .....+|||||+|+..   ++.++.        .+.|
T Consensus        81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~  160 (476)
T cd03791          81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIK  160 (476)
T ss_pred             ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCC
Confidence            2222111100            00000    01011111111 1112389999999742   222222        1456


Q ss_pred             cEEEeeeCCcchhhhhhhhHhhhcCCC-ChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHH---------Hhc
Q 011355          185 NVVVSWHGIAYETIHSDIIQELLRTPE-EPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKR---------IYM  254 (488)
Q Consensus       185 ~~v~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~---------~~g  254 (488)
                       ++.++|+..+................ ......-.........+...+..+|.++++|+..++.+.+         .+.
T Consensus       161 -~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~  239 (476)
T cd03791         161 -TVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLR  239 (476)
T ss_pred             -EEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHH
Confidence             99999997654321111000000000 0000000000000011124467899999999999988764         223


Q ss_pred             CCCCcEEEecCCccCCCcCCCccc-----------------chhhhhhhCCC--CCCcEEEEEEeeeccccChHHHHHHH
Q 011355          255 IPEERVHVILNGVDEEVFKPDVAM-----------------GKDFKKKFGIP--ENRSLVLGMAGRLVKDKGHPLMFEAL  315 (488)
Q Consensus       255 ~~~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~~i~--~~~~~~i~~~Grl~~~Kg~~~ll~a~  315 (488)
                      .+..++.+|+||+|.+.+.+....                 +..+++++|++  ++. ++++++||+.++||++.+++++
T Consensus       240 ~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~  318 (476)
T cd03791         240 ARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDA-PLFGFVGRLTEQKGIDLLLEAL  318 (476)
T ss_pred             hccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCC-CEEEEEeeccccccHHHHHHHH
Confidence            356899999999999888764321                 34578899986  444 7899999999999999999999


Q ss_pred             HHhHhhccCCCCCeEEEEEeCCCch--hHHhh----hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHH
Q 011355          316 KQLLAENDTFRRSTVFLVAGDGPWG--ARYRD----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAM  389 (488)
Q Consensus       316 ~~l~~~~~~~~~~~~l~ivG~g~~~--~~~~~----l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAm  389 (488)
                      ..+.+      .+++|+++|+|+..  +.+++    ..++|.+.+..+.+++..+|+.||++++||.. |+||++.+|||
T Consensus       319 ~~l~~------~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~-E~~gl~~lEAm  391 (476)
T cd03791         319 PELLE------LGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRF-EPCGLTQMYAM  391 (476)
T ss_pred             HHHHH------cCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCC-CCCcHHHHHHh
Confidence            99876      35899999998532  33333    24688877666777888999999999999975 99999999999


Q ss_pred             HcCCcEEEeCCCCcccceeecCC------ceeEeCC-CHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHhhhCCHHHHH
Q 011355          390 LSGKPLMATRLASIVGSVIVGTD------MGYLFSP-QVESVKKALYGIWAD--GREVLEKKGLVARKRGLNLFTATKMA  460 (488)
Q Consensus       390 a~G~PVI~~~~~~~~~e~v~~~~------~g~l~~~-d~~~la~~i~~ll~~--~~~~~~~~~~~a~~~~~~~fs~~~~~  460 (488)
                      +||+|||+++.||+. |++.++.      +|+++++ |+++++++|.++++.  .++.+.++++++.+   +.|||+.++
T Consensus       392 a~G~pvI~~~~gg~~-e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~---~~fsw~~~a  467 (476)
T cd03791         392 RYGTVPIVRATGGLA-DTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA---QDFSWDRSA  467 (476)
T ss_pred             hCCCCCEECcCCCcc-ceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc---cCCChHHHH
Confidence            999999999999998 8888887      9999999 999999999998862  26777777777654   569999999


Q ss_pred             HHHHHHHH
Q 011355          461 AAYERLFL  468 (488)
Q Consensus       461 ~~~~~~~~  468 (488)
                      ++|.++|+
T Consensus       468 ~~~~~~y~  475 (476)
T cd03791         468 KEYLELYR  475 (476)
T ss_pred             HHHHHHHh
Confidence            99999986

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=2.2e-37  Score=300.77  Aligned_cols=361  Identities=29%  Similarity=0.439  Sum_probs=271.8

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEec-CCCCccCcchhHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHL-SKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~  156 (488)
                      ||++++..+|+  ..||.+.++..++++|.+.||+|.+++.................... .................+.
T Consensus         1 kI~ii~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
T cd03801           1 KILLVTPEYPP--SVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLR   78 (374)
T ss_pred             CeeEEecccCC--ccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHH
Confidence            68999988776  37999999999999999999999999988654433221111111100 0000001112222222333


Q ss_pred             HHhcCCCCCcEEEeCCcchHHh-----hhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          157 TQNSTGKPFDVIHTESVGLRHT-----RARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~~~~-----~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ...... +||+||++.......     ...+.| ++...|+.........          ...........     ....
T Consensus        79 ~~~~~~-~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~----------~~~~~~~~~~~-----~~~~  141 (374)
T cd03801          79 RLLRRE-RFDVVHAHDWLALLAAALAARLLGIP-LVLTVHGLEFGRPGNE----------LGLLLKLARAL-----ERRA  141 (374)
T ss_pred             HHhhhc-CCcEEEEechhHHHHHHHHHHhcCCc-EEEEeccchhhccccc----------hhHHHHHHHHH-----HHHH
Confidence            333333 899999997543322     234556 9999998754322111          00001111111     2255


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM  311 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~l  311 (488)
                      ++.+|.++++|+...+.+.+.++.+..++.++|||+|...+....   ...+.....+.+. ++++++|++.+.||++.+
T Consensus       142 ~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~i~~~g~~~~~k~~~~~  217 (374)
T cd03801         142 LRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP---RAARRRLGIPEDE-PVILFVGRLVPRKGVDLL  217 (374)
T ss_pred             HHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc---hHHHhhcCCcCCC-eEEEEecchhhhcCHHHH
Confidence            788999999999999999997766557999999999988775432   2233333334444 889999999999999999


Q ss_pred             HHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHH
Q 011355          312 FEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTV  385 (488)
Q Consensus       312 l~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~  385 (488)
                      ++++..+.++.    ++++|+++|.++..+.+++      ..++|.+.|+++.+++.++|+.||++++|+.. ||+|+++
T Consensus       218 i~~~~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~-~~~~~~~  292 (374)
T cd03801         218 LEALAKLRKEY----PDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLY-EGFGLVL  292 (374)
T ss_pred             HHHHHHHhhhc----CCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchh-ccccchH
Confidence            99999999887    8999999998877766554      45899999999999999999999999999975 9999999


Q ss_pred             HHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 011355          386 LEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYE  464 (488)
Q Consensus       386 lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~  464 (488)
                      +|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++.+.+.|+|+++++++.
T Consensus       293 ~Ea~~~g~pvI~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (374)
T cd03801         293 LEAMAAGLPVVASDVGGIP-EVVEDGETGLLVPPGDPEALAEAILRLLDD-PELRRRLGEAARERVAERFSWDRVAARTE  370 (374)
T ss_pred             HHHHHcCCcEEEeCCCChh-HHhcCCcceEEeCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            9999999999999999987 88888999999999 899999999999999 89999999999989999999999999999


Q ss_pred             HHHH
Q 011355          465 RLFL  468 (488)
Q Consensus       465 ~~~~  468 (488)
                      ++|+
T Consensus       371 ~~~~  374 (374)
T cd03801         371 EVYY  374 (374)
T ss_pred             HhhC
Confidence            8873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7.1e-38  Score=303.96  Aligned_cols=351  Identities=24%  Similarity=0.314  Sum_probs=266.1

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQT  157 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ||++++..+    ..||+++.+..++++|.+.||+|.+++..............++.+......  ........+..+..
T Consensus         1 ~i~~i~~~~----~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~~--~~~~~~~~~~~~~~   74 (365)
T cd03807           1 KVLHVITGL----DVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVYCLGKR--PGRPDPGALLRLYK   74 (365)
T ss_pred             CeEEEEeec----cCccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEEEEecc--cccccHHHHHHHHH
Confidence            688998866    349999999999999999999999999765433221111112222221110  11122222333333


Q ss_pred             HhcCCCCCcEEEeCCcch--H----HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          158 QNSTGKPFDVIHTESVGL--R----HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       158 ~~~~~~~~Dvv~~~~~~~--~----~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ..++. +||+||++....  .    .....+.+ ++++.|+......              .........+.+     ..
T Consensus        75 ~~~~~-~~div~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~--------------~~~~~~~~~~~~-----~~  133 (365)
T cd03807          75 LIRRL-RPDVVHTWMYHADLYGGLAARLAGVPP-VIWGIRHSDLDLG--------------KKSTRLVARLRR-----LL  133 (365)
T ss_pred             HHHhh-CCCEEEeccccccHHHHHHHHhcCCCc-EEEEecCCccccc--------------chhHhHHHHHHH-----Hh
Confidence            33333 899999985321  1    11113345 8999998644311              000122222222     34


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM  311 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~l  311 (488)
                      .+.+|.++++|+...+.+.+ ++++..++.+++||+|...+..........+++++++++. ++++++|++.+.||++.+
T Consensus       134 ~~~~~~~i~~s~~~~~~~~~-~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~K~~~~l  211 (365)
T cd03807         134 SSFIPLIVANSAAAAEYHQA-IGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDT-FLIGIVARLHPQKDHATL  211 (365)
T ss_pred             ccccCeEEeccHHHHHHHHH-cCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCC-eEEEEecccchhcCHHHH
Confidence            57789999999999999988 5888889999999999887776655556677889988776 889999999999999999


Q ss_pred             HHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh-------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          312 FEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       312 l~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      ++++..+.++.    ++++++++|.++.....+.       +.++|.+.|.  .+++.++|+.||++++||.. ||+|++
T Consensus       212 i~a~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~-e~~~~~  284 (365)
T cd03807         212 LRAAALLLKKF----PNARLLLVGDGPDRANLELLALKELGLEDKVILLGE--RSDVPALLNALDVFVLSSLS-EGFPNV  284 (365)
T ss_pred             HHHHHHHHHhC----CCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCEEEeCCcc-ccCCcH
Confidence            99999998887    8999999999876543322       3468999997  45899999999999999985 999999


Q ss_pred             HHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          385 VLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      ++|||+||+|||+++.++.. +++.+  +|+++++ |+++++++|.+++++ ++.+.++++++++.+.++|||++++++|
T Consensus       285 ~~Ea~a~g~PvI~~~~~~~~-e~~~~--~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~  360 (365)
T cd03807         285 LLEAMACGLPVVATDVGDNA-ELVGD--TGFLVPPGDPEALAEAIEALLAD-PALRQALGEAARERIEENFSIEAMVEAY  360 (365)
T ss_pred             HHHHHhcCCCEEEcCCCChH-HHhhc--CCEEeCCCCHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            99999999999999999987 77766  8999998 999999999999999 8999999999999999999999999999


Q ss_pred             HHHHH
Q 011355          464 ERLFL  468 (488)
Q Consensus       464 ~~~~~  468 (488)
                      .++|+
T Consensus       361 ~~~y~  365 (365)
T cd03807         361 EELYR  365 (365)
T ss_pred             HHHhC
Confidence            99884

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7.7e-38  Score=304.89  Aligned_cols=355  Identities=24%  Similarity=0.256  Sum_probs=258.1

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCce--EEEe--cCCCCccCcchhHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISS--LYFH--LSKPTAAGYLDQSIVWQ  153 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~--i~~~--~~~~~~~~~~~~~~~~~  153 (488)
                      ||+++++.+++  ..||.++++.+++++|.+.||+|++++...............  ....  .................
T Consensus         1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (375)
T cd03821           1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLL   78 (375)
T ss_pred             CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHH
Confidence            68999988875  789999999999999999999999999876543322211110  0000  00000000001111111


Q ss_pred             HHHHHhcCCCCCcEEEeCCcch-------HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHH
Q 011355          154 QLQTQNSTGKPFDVIHTESVGL-------RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVV  226 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~~~~-------~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ......  ..++|+||+++...       ......+.| ++...|+.......          ..    ..+...+....
T Consensus        79 ~~~~~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~----------~~----~~~~~~~~~~~  141 (375)
T cd03821          79 AWLRLN--IREADIVHVHGLWSYPSLAAARAARKYGIP-YVVSPHGMLDPWAL----------PH----KALKKRLAWFL  141 (375)
T ss_pred             HHHHHh--CCCCCEEEEecccchHHHHHHHHHHHhCCC-EEEEcccccccccc----------cc----chhhhHHHHHH
Confidence            122222  22899999987321       111223556 88899985432210          01    11112222222


Q ss_pred             HHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecccc
Q 011355          227 EEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK  306 (488)
Q Consensus       227 ~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~K  306 (488)
                      .+...++.++.+++.|+........  +.+..++.++|||+|.+.+........  |+.++.+.++ ++++++|++.+.|
T Consensus       142 ~~~~~~~~~~~i~~~s~~~~~~~~~--~~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~i~~~G~~~~~K  216 (375)
T cd03821         142 FERRLLQAAAAVHATSEQEAAEIRR--LGLKAPIAVIPNGVDIPPFAALPSRGR--RRKFPILPDK-RIILFLGRLHPKK  216 (375)
T ss_pred             HHHHHHhcCCEEEECCHHHHHHHHh--hCCcccEEEcCCCcChhccCcchhhhh--hhhccCCCCC-cEEEEEeCcchhc
Confidence            2335568899999999877777665  235678999999999987765443222  6666666666 8899999999999


Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--hHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--ARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                      |++.+++++..+.+++    ++++++++|.++..  ..++.      +.++|+++|+++++++..+|+.||++++||.. 
T Consensus       217 ~~~~li~a~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-  291 (375)
T cd03821         217 GLDLLIEAFAKLAERF----PDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHS-  291 (375)
T ss_pred             CHHHHHHHHHHhhhhc----CCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEecccc-
Confidence            9999999999999888    89999999986432  22222      34789999999999999999999999999975 


Q ss_pred             CCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHH
Q 011355          379 QGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATK  458 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~  458 (488)
                      ||+|++++|||+||+|||+++.++.. +++.+ ..|++++.+.++++++|.+++++ ++.++++++++++.+.++|+|+.
T Consensus       292 e~~~~~~~Eama~G~PvI~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~  368 (375)
T cd03821         292 ENFGIVVAEALACGTPVVTTDKVPWQ-ELIEY-GCGWVVDDDVDALAAALRRALEL-PQRLKAMGENGRALVEERFSWTA  368 (375)
T ss_pred             CCCCcHHHHHHhcCCCEEEcCCCCHH-HHhhc-CceEEeCCChHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHH
Confidence            99999999999999999999999988 77777 88998887779999999999999 89999999999999889999999


Q ss_pred             HHHHHH
Q 011355          459 MAAAYE  464 (488)
Q Consensus       459 ~~~~~~  464 (488)
                      +++++.
T Consensus       369 ~~~~~~  374 (375)
T cd03821         369 IAQQLL  374 (375)
T ss_pred             HHHHhh
Confidence            999875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.4e-37  Score=303.64  Aligned_cols=358  Identities=16%  Similarity=0.171  Sum_probs=245.0

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCc--cCc-ch---h
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTA--AGY-LD---Q  148 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~-~~---~  148 (488)
                      ++-||++++.      ..+|.+.++..+++.|+++||+|++++..............++.++......  .+. ..   +
T Consensus         2 ~~~~~~~~~~------~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~   75 (415)
T cd03816           2 KRKRVCVLVL------GDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFA   75 (415)
T ss_pred             CccEEEEEEe------cccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCCCccccccchHHHHH
Confidence            3457888875      4566677778999999999999999998754332221223344444332211  110 01   0


Q ss_pred             -HH----HHHHHHHHhcCCCCCcEEEeCCcc-h----HHh---hhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhH
Q 011355          149 -SI----VWQQLQTQNSTGKPFDVIHTESVG-L----RHT---RARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQA  215 (488)
Q Consensus       149 -~~----~~~~~~~~~~~~~~~Dvv~~~~~~-~----~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~  215 (488)
                       ..    .+..+....... +||+||+|+.. +    ..+   ...+.| ++.++|+.++....       .........
T Consensus        76 ~~~~~~~~~~~~~~l~~~~-~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~-~V~~~h~~~~~~~~-------~~~~~~~~~  146 (415)
T cd03816          76 PLKVLWQFFSLLWLLYKLR-PADYILIQNPPSIPTLLIAWLYCLLRRTK-LIIDWHNYGYTILA-------LKLGENHPL  146 (415)
T ss_pred             HHHHHHHHHHHHHHHHhcC-CCCEEEEeCCCCchHHHHHHHHHHHhCCe-EEEEcCCchHHHHh-------cccCCCCHH
Confidence             01    111112122233 89999998632 1    111   123456 89999986432110       001111111


Q ss_pred             HHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccc--hhhhh---------
Q 011355          216 YALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG--KDFKK---------  284 (488)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~--~~~r~---------  284 (488)
                      ..+..++.+     ..++.+|.++++|+.+++.+.+ +|.+.+++.|||||.+ ..|.+.....  ..+.+         
T Consensus       147 ~~~~~~~e~-----~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~~-~~f~p~~~~~~~~~~~~~~~~~~~~~  219 (415)
T cd03816         147 VRLAKWYEK-----LFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRPP-EQFRPLPLEEKHELFLKLAKTFLTRE  219 (415)
T ss_pred             HHHHHHHHH-----HHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCCH-HHceeCcHHHHHHHHHhccccccccc
Confidence            123333332     4568899999999999999988 7888999999999954 4444432211  11111         


Q ss_pred             ----hhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhh------ccCCCCCeEEEEEeCCCchhHHhhh----C-Cc
Q 011355          285 ----KFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAE------NDTFRRSTVFLVAGDGPWGARYRDL----G-TN  349 (488)
Q Consensus       285 ----~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~------~~~~~~~~~l~ivG~g~~~~~~~~l----~-~~  349 (488)
                          ..++.+++..+++++||+.+.||++.+++|+..+.+.      +    |+++|+|+|+|+..+.++++    + ++
T Consensus       220 ~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~----~~i~l~ivG~G~~~~~l~~~~~~~~l~~  295 (415)
T cd03816         220 LRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKL----PKLLCIITGKGPLKEKYLERIKELKLKK  295 (415)
T ss_pred             cccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccC----CCEEEEEEecCccHHHHHHHHHHcCCCc
Confidence                1123344447788999999999999999999998752      3    68999999999987766652    2 45


Q ss_pred             EEEe-CccCHHHHHHHHHhcCEEEeCCC--CCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHH
Q 011355          350 VIVL-GPLDQTRLAMFYNAIDIFVNPTL--RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKK  426 (488)
Q Consensus       350 V~~~-g~v~~~~l~~~~~~adv~v~ps~--~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~  426 (488)
                      +.+. |+++.+++.++|++||+++.|+.  ..||+|++++|||+||+|||+++.++.. |++.++.+|++++ |++++++
T Consensus       296 ~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~-eiv~~~~~G~lv~-d~~~la~  373 (415)
T cd03816         296 VTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCID-ELVKHGENGLVFG-DSEELAE  373 (415)
T ss_pred             EEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHH-HHhcCCCCEEEEC-CHHHHHH
Confidence            6554 78999999999999999986532  2478999999999999999999999988 9999999999997 9999999


Q ss_pred             HHHHHHhcC--HHHHHHHHHHHHHHHhhhCCHHHHHHH
Q 011355          427 ALYGIWADG--REVLEKKGLVARKRGLNLFTATKMAAA  462 (488)
Q Consensus       427 ~i~~ll~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~  462 (488)
                      +|.++++++  ++.+++|++++++..+  ++|++..++
T Consensus       374 ~i~~ll~~~~~~~~~~~m~~~~~~~~~--~~~~~~~~~  409 (415)
T cd03816         374 QLIDLLSNFPNRGKLNSLKKGAQEESE--LRWDENWDR  409 (415)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHhhh--cCHHHHHHH
Confidence            999999973  7889999999999984  466665444

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5e-38  Score=305.58  Aligned_cols=355  Identities=22%  Similarity=0.215  Sum_probs=260.4

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCcc-CcchhHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAA-GYLDQSIVWQQLQ  156 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~  156 (488)
                      ||++++..++++ ..||+++++.+++++|.+.||+|++++.......................... ........+....
T Consensus         1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (365)
T cd03809           1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRL   79 (365)
T ss_pred             CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHH
Confidence            688888777654 78999999999999999999999999988654443321111111000000000 1111111222222


Q ss_pred             HHhcCCCCCcEEEeCCcchHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCcc
Q 011355          157 TQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYA  236 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (488)
                      .... . ++|+||+++.........+.| .+..+|+...........         ...........     ...++++|
T Consensus        80 ~~~~-~-~~Dii~~~~~~~~~~~~~~~~-~i~~~hd~~~~~~~~~~~---------~~~~~~~~~~~-----~~~~~~~d  142 (365)
T cd03809          80 LLLL-L-GLDLLHSPHNTAPLLRLRGVP-VVVTIHDLIPLRFPEYFS---------PGFRRYFRRLL-----RRALRRAD  142 (365)
T ss_pred             Hhhh-c-CCCeeeecccccCcccCCCCC-EEEEeccchhhhCcccCC---------HHHHHHHHHHH-----HHHHHHcC
Confidence            2222 2 899999998655443445567 999999875432211110         00011112111     24578899


Q ss_pred             EEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHH
Q 011355          237 HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK  316 (488)
Q Consensus       237 ~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~  316 (488)
                      .++++|+..++.+.+.++.+..++.++|||+|...+.......   +.+.....++ ++++++|++.+.||++.+++++.
T Consensus       143 ~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~i~~~G~~~~~K~~~~~l~~~~  218 (365)
T cd03809         143 AIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE---VLRALYLLPR-PYFLYVGTIEPRKNLERLLEAFA  218 (365)
T ss_pred             EEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH---HHHHhcCCCC-CeEEEeCCCccccCHHHHHHHHH
Confidence            9999999999999998887788999999999988775543211   3333344454 78899999999999999999999


Q ss_pred             HhHhhccCCCCCeEEEEEeCCCchh-HH-h-----hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHH
Q 011355          317 QLLAENDTFRRSTVFLVAGDGPWGA-RY-R-----DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAM  389 (488)
Q Consensus       317 ~l~~~~~~~~~~~~l~ivG~g~~~~-~~-~-----~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAm  389 (488)
                      .+.++.    ++++|+++|.++... .. +     ...++|+++|+++.+++.++|+.||++++||. .|++|++++|||
T Consensus       219 ~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~-~e~~~~~~~Ea~  293 (365)
T cd03809         219 RLPAKG----PDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSL-YEGFGLPVLEAM  293 (365)
T ss_pred             HHHHhc----CCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccch-hccCCCCHHHHh
Confidence            999887    789999999765332 11 1     24589999999999999999999999999997 599999999999


Q ss_pred             HcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 011355          390 LSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYE  464 (488)
Q Consensus       390 a~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~  464 (488)
                      ++|+|||+++.++.. |++  +.+|+++++ |.++++++|.+++++ ++.+..+++++++.+ ++|+|+++++++.
T Consensus       294 a~G~pvI~~~~~~~~-e~~--~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~-~~~sw~~~~~~~~  364 (365)
T cd03809         294 ACGTPVIASNISSLP-EVA--GDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARA-KRFSWEKTARRTL  364 (365)
T ss_pred             cCCCcEEecCCCCcc-cee--cCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHH-HhCCHHHHHHHHh
Confidence            999999999999988 666  356888888 999999999999998 999999999999766 5599999998875

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.3e-37  Score=300.46  Aligned_cols=360  Identities=24%  Similarity=0.354  Sum_probs=261.4

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQT  157 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ||++++..|||  ..||.+..+..++++|.+.||+|++++..................................+..+..
T Consensus         1 kil~~~~~~~p--~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
T cd03817           1 KIGIFTDTYLP--QVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALII   78 (374)
T ss_pred             CeeEeehhccC--CCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHH
Confidence            68999998887  6799999999999999999999999998764433222111100000000000000111111122222


Q ss_pred             HhcCCCCCcEEEeCCcchH------HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          158 QNSTGKPFDVIHTESVGLR------HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       158 ~~~~~~~~Dvv~~~~~~~~------~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ..... +||+||+++....      .....++| ++.+.|+.+....+..     . ...... ......    ..+...
T Consensus        79 ~~~~~-~~Div~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~-----~-~~~~~~-~~~~~~----~~~~~~  145 (374)
T cd03817          79 ILKEL-GPDIVHTHTPFSLGLLGLRVARKLGIP-VVATYHTMYEDYTHYV-----P-LGRLLA-RAVVRR----KLSRRF  145 (374)
T ss_pred             HHhhc-CCCEEEECCchhhhhHHHHHHHHcCCC-EEEEecCCHHHHHHHH-----h-cccchh-HHHHHH----HHHHHH
Confidence            22222 8999999864221      11223567 8999998654221111     0 000000 111110    122356


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM  311 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~l  311 (488)
                      ++.+|.++++|+..++.+.+ ++.+ .++.++|||+|...+.....  ...++++++++++ ++++++|++.+.||++.+
T Consensus       146 ~~~~d~i~~~s~~~~~~~~~-~~~~-~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~i~~~G~~~~~k~~~~l  220 (374)
T cd03817         146 YNRCDAVIAPSEKIADLLRE-YGVK-RPIEVIPTGIDLDRFEPVDG--DDERRKLGIPEDE-PVLLYVGRLAKEKNIDFL  220 (374)
T ss_pred             hhhCCEEEeccHHHHHHHHh-cCCC-CceEEcCCccchhccCccch--hHHHHhcCCCCCC-eEEEEEeeeecccCHHHH
Confidence            78999999999999999887 6654 56999999999887765433  2335666666555 889999999999999999


Q ss_pred             HHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHH
Q 011355          312 FEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTV  385 (488)
Q Consensus       312 l~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~  385 (488)
                      ++++..+.++.    ++++++++|+|+..+.+++      +.++|.++|+++++++..+|+.||++++||. .|++|+++
T Consensus       221 ~~~~~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~-~e~~~~~~  295 (374)
T cd03817         221 IRAFARLLKEE----PDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFAST-TETQGLVL  295 (374)
T ss_pred             HHHHHHHHHhC----CCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccc-ccCcChHH
Confidence            99999999887    8999999999987766554      3478999999999999999999999999997 59999999


Q ss_pred             HHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 011355          386 LEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYE  464 (488)
Q Consensus       386 lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~  464 (488)
                      +|||+||+|||+++.++.. +++.++.+|+++++ +. +++++|.+++++ ++.+++|++++++.+.+.+    ..+++.
T Consensus       296 ~Ea~~~g~PvI~~~~~~~~-~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~  368 (374)
T cd03817         296 LEAMAAGLPVVAVDAPGLP-DLVADGENGFLFPPGDE-ALAEALLRLLQD-PELRRRLSKNAEESAEKFS----FAKKVE  368 (374)
T ss_pred             HHHHHcCCcEEEeCCCChh-hheecCceeEEeCCCCH-HHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence            9999999999999999987 89999999999998 55 999999999999 8888999999999997743    666777


Q ss_pred             HHHHH
Q 011355          465 RLFLC  469 (488)
Q Consensus       465 ~~~~~  469 (488)
                      ++|++
T Consensus       369 ~~~~~  373 (374)
T cd03817         369 KLYEE  373 (374)
T ss_pred             HHHhc
Confidence            77764

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=1e-36  Score=298.81  Aligned_cols=375  Identities=15%  Similarity=0.099  Sum_probs=251.3

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCC--eEEEEecCCCCCCCC----C---CC------CceEEEec--
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGH--ELHIFTASCLNCSFP----T---YP------ISSLYFHL--  137 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~~~----~---~~------~~~i~~~~--  137 (488)
                      ++++|+|+++..   ...||+|+.+...+.+|++.|+  +|.++|...+.....    .   .+      ...+.+..  
T Consensus        32 ~~~~v~f~HP~~---~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~l~~~~  108 (463)
T PLN02949         32 RKRAVGFFHPYT---NDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRK  108 (463)
T ss_pred             CCcEEEEECCCC---CCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEEecccc
Confidence            567999999742   2445999999999999999998  777777553222111    0   00      00111211  


Q ss_pred             -CCCCccCcc-hhHHHHHHH---HHHhcCCCCCcEEEeCCcc----hHHhhhccCCcEEEeeeCCcchhhhhhhhHhh--
Q 011355          138 -SKPTAAGYL-DQSIVWQQL---QTQNSTGKPFDVIHTESVG----LRHTRARNLTNVVVSWHGIAYETIHSDIIQEL--  206 (488)
Q Consensus       138 -~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~Dvv~~~~~~----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~--  206 (488)
                       ..+...+.+ -....+..+   ....... .|| |++.+.+    ++.....+.| ++..+|......   ++....  
T Consensus       109 ~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~-~p~-v~vDt~~~~~~~pl~~~~~~~-v~~yvH~p~~~~---dm~~~v~~  182 (463)
T PLN02949        109 WIEEETYPRFTMIGQSLGSVYLAWEALCKF-TPL-YFFDTSGYAFTYPLARLFGCK-VVCYTHYPTISS---DMISRVRD  182 (463)
T ss_pred             ccccccCCceehHHHHHHHHHHHHHHHHhc-CCC-EEEeCCCcccHHHHHHhcCCc-EEEEEeCCcchH---HHHHHHhh
Confidence             111111111 111111111   1111111 455 5554433    3333333556 999999653221   111110  


Q ss_pred             -----------hcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCC
Q 011355          207 -----------LRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPD  275 (488)
Q Consensus       207 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~  275 (488)
                                 .........+.++.+......+ ...+.+|.++++|+++++.+.+.++. ++++.+++||+|...+...
T Consensus       183 ~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~-~~~~~ad~ii~nS~~t~~~l~~~~~~-~~~i~vvyp~vd~~~~~~~  260 (463)
T PLN02949        183 RSSMYNNDASIARSFWLSTCKILYYRAFAWMYG-LVGRCAHLAMVNSSWTKSHIEALWRI-PERIKRVYPPCDTSGLQAL  260 (463)
T ss_pred             cccccCccchhhccchhHHHHHHHHHHHHHHHH-HHcCCCCEEEECCHHHHHHHHHHcCC-CCCeEEEcCCCCHHHcccC
Confidence                       0000001113333333332221 34589999999999999999886665 4588999999987655322


Q ss_pred             cccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch------hHHhh----
Q 011355          276 VAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG------ARYRD----  345 (488)
Q Consensus       276 ~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~------~~~~~----  345 (488)
                      +..         -+.++ ..++++||+.++||++.+|+|++++.++.++-.++++|+|+|+++..      +++++    
T Consensus       261 ~~~---------~~~~~-~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~  330 (463)
T PLN02949        261 PLE---------RSEDP-PYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKE  330 (463)
T ss_pred             Ccc---------ccCCC-CEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHH
Confidence            110         01223 57889999999999999999999887532100168999999986421      22332    


Q ss_pred             --hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeec---CCceeEeCCC
Q 011355          346 --LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG---TDMGYLFSPQ  420 (488)
Q Consensus       346 --l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~---~~~g~l~~~d  420 (488)
                        +.++|+|+|+++.+++.++|+.||++++||. .|+||++++|||++|+|||+++.||..++++.+   +.+|++++ |
T Consensus       331 l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~-~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~-~  408 (463)
T PLN02949        331 LGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI-DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT-T  408 (463)
T ss_pred             cCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc-cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC-C
Confidence              3578999999999999999999999999996 699999999999999999999999976577765   67899987 9


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhcc
Q 011355          421 VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISND  473 (488)
Q Consensus       421 ~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~  473 (488)
                      +++++++|.++++++++.+++|++++++.+ ++|||+++.+++.+.+++++++
T Consensus       409 ~~~la~ai~~ll~~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~~  460 (463)
T PLN02949        409 VEEYADAILEVLRMRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRPILNS  460 (463)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHhh
Confidence            999999999999964788899999999999 5599999999999999998773

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=1.3e-37  Score=301.69  Aligned_cols=336  Identities=26%  Similarity=0.309  Sum_probs=252.5

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQT  157 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ||++++..||+     |.++++.++++.|.++||+|++++..................  ........+........+..
T Consensus         1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   73 (355)
T cd03799           1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELA--RTRYLARSLALLAQALVLAR   73 (355)
T ss_pred             CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccc--chHHHHHHHHHHHHHHHHHH
Confidence            69999998865     267899999999999999999999876433221100000000  00000011111111112222


Q ss_pred             HhcCCCCCcEEEeCCcc---hHHhhh---ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          158 QNSTGKPFDVIHTESVG---LRHTRA---RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       158 ~~~~~~~~Dvv~~~~~~---~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ..+.. ++|+||+|...   ...+..   .+.| ++.+.|+......           ..    .    .     .....
T Consensus        74 ~~~~~-~~Dii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------~~----~----~-----~~~~~  127 (355)
T cd03799          74 ELRRL-GIDHIHAHFGTTPATVAMLASRLGGIP-YSFTAHGKDIFRS-----------PD----A----I-----DLDEK  127 (355)
T ss_pred             HHHhc-CCCEEEECCCCchHHHHHHHHHhcCCC-EEEEEeccccccc-----------Cc----h----H-----HHHHH
Confidence            22223 89999998642   111211   2345 8888886422100           00    0    0     11144


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM  311 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~l  311 (488)
                      ++.+|.++++|+..++.+.+.++.+..++.++|||+|.+.+.....         . ..++++.++++|++.+.||++.+
T Consensus       128 ~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~---------~-~~~~~~~i~~~g~~~~~k~~~~l  197 (355)
T cd03799         128 LARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPP---------P-PPGEPLRILSVGRLVEKKGLDYL  197 (355)
T ss_pred             HhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccc---------c-ccCCCeEEEEEeeeccccCHHHH
Confidence            6789999999999999999976888899999999999887755430         0 12333789999999999999999


Q ss_pred             HHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC-----CC
Q 011355          312 FEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA-----QG  380 (488)
Q Consensus       312 l~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~-----eg  380 (488)
                      ++++..+.++.    ++++++++|.++..+.+++      +.++|.+.|+++.+++..+|++||++++||..+     ||
T Consensus       198 ~~~~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~  273 (355)
T cd03799         198 LEALALLKDRG----IDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREG  273 (355)
T ss_pred             HHHHHHHhhcC----CCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccC
Confidence            99999998877    8999999999887765554      347899999999999999999999999999743     99


Q ss_pred             CChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHH
Q 011355          381 LDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKM  459 (488)
Q Consensus       381 ~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~  459 (488)
                      +|++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.+.+|++++++.+.++|||+..
T Consensus       274 ~~~~~~Ea~a~G~Pvi~~~~~~~~-~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~a~~~~~~~~s~~~~  351 (355)
T cd03799         274 LPVVLMEAMAMGLPVISTDVSGIP-ELVEDGETGLLVPPGDPEALADAIERLLDD-PELRREMGEAGRARVEEEFDIRKQ  351 (355)
T ss_pred             ccHHHHHHHHcCCCEEecCCCCcc-hhhhCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHH
Confidence            999999999999999999999987 89988889999998 999999999999999 888999999999999999999998


Q ss_pred             HHH
Q 011355          460 AAA  462 (488)
Q Consensus       460 ~~~  462 (488)
                      +++
T Consensus       352 ~~~  354 (355)
T cd03799         352 AAR  354 (355)
T ss_pred             hhc
Confidence            865

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.4e-37  Score=298.06  Aligned_cols=337  Identities=25%  Similarity=0.308  Sum_probs=252.0

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEec-----CCCCc-cC-----cc
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHL-----SKPTA-AG-----YL  146 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~-----~~~~~-~~-----~~  146 (488)
                      ||++++..+|+. ..||+++++.+++++|.++||+|++++....................     ..... ..     ..
T Consensus         1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (359)
T cd03823           1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDY   79 (359)
T ss_pred             CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhc
Confidence            689999888763 68999999999999999999999999987654433221111111110     00000 00     00


Q ss_pred             hhHHHHHHHHHHhcCCCCCcEEEeCCcch------HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHH
Q 011355          147 DQSIVWQQLQTQNSTGKPFDVIHTESVGL------RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAE  220 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~------~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (488)
                      ........+....... +||+||++....      ......++| ++.++|+.+.......                   
T Consensus        80 ~~~~~~~~~~~~~~~~-~~dii~~~~~~~~~~~~~~~~~~~~~~-~i~~~hd~~~~~~~~~-------------------  138 (359)
T cd03823          80 DNPAVVAEFARLLEDF-RPDVVHFHHLQGLGVSILRAARDRGIP-IVLTLHDYWLICPRQG-------------------  138 (359)
T ss_pred             cCHHHHHHHHHHHHHc-CCCEEEECCccchHHHHHHHHHhcCCC-EEEEEeeeeeecchhh-------------------
Confidence            1111223333333333 899999987321      112233457 9999998543211100                   


Q ss_pred             HHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEe
Q 011355          221 RASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG  300 (488)
Q Consensus       221 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  300 (488)
                               ......|.++++|+...+.+.+ ++.+..++.+++||+|...+.....         +.+.++ ++++++|
T Consensus       139 ---------~~~~~~d~ii~~s~~~~~~~~~-~~~~~~~~~vi~n~~~~~~~~~~~~---------~~~~~~-~~i~~~G  198 (359)
T cd03823         139 ---------LFKKGGDAVIAPSRFLLDRYVA-NGLFAEKISVIRNGIDLDRAKRPRR---------APPGGR-LRFGFIG  198 (359)
T ss_pred             ---------hhccCCCEEEEeCHHHHHHHHH-cCCCccceEEecCCcChhhcccccc---------CCCCCc-eEEEEEe
Confidence                     0112239999999999999988 4545679999999999987654321         123343 8899999


Q ss_pred             eeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh---hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC
Q 011355          301 RLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD---LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       301 rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~---l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~  377 (488)
                      ++.+.||++.++++++.+.+      ++++|+++|.++.......   ..++|.++|+++.+++.++|+.||++++||..
T Consensus       199 ~~~~~k~~~~li~~~~~l~~------~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~  272 (359)
T cd03823         199 QLTPHKGVDLLLEAFKRLPR------GDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIW  272 (359)
T ss_pred             cCccccCHHHHHHHHHHHHh------cCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcc
Confidence            99999999999999999875      4899999999876654433   45899999999999999999999999999975


Q ss_pred             CCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCH
Q 011355          378 AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTA  456 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~  456 (488)
                      .||+|++++|||+||+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.++.+++++++....    
T Consensus       273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~----  346 (359)
T cd03823         273 PENFPLVIREALAAGVPVIASDIGGMA-ELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI----  346 (359)
T ss_pred             cCCCChHHHHHHHCCCCEEECCCCCHH-HHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH----
Confidence            699999999999999999999999987 88888889999999 899999999999998 99999999998887643    


Q ss_pred             HHHHHHHHHHHH
Q 011355          457 TKMAAAYERLFL  468 (488)
Q Consensus       457 ~~~~~~~~~~~~  468 (488)
                      +++++++.++|+
T Consensus       347 ~~~~~~~~~~~~  358 (359)
T cd03823         347 EDQAEEYLKLYR  358 (359)
T ss_pred             HHHHHHHHHHhh
Confidence            899999999885

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=100.00  E-value=1.1e-37  Score=301.59  Aligned_cols=337  Identities=16%  Similarity=0.123  Sum_probs=236.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCCCceE-EEecCCCCccCcchhHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKR--GHELHIFTASCLNCSFPTYPISSL-YFHLSKPTAAGYLDQSIVWQ  153 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~  153 (488)
                      |||++++..+|   ..||+|+++.+++++|.++  ||+|.+++...............+ .+.....   ..........
T Consensus         1 mkI~~~~~~~~---~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   74 (359)
T PRK09922          1 MKIAFIGEAVS---GFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWLKEIKYAQSFSNIKL---SFLRRAKHVY   74 (359)
T ss_pred             CeeEEeccccc---CCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHHHhcchhcccccchh---hhhcccHHHH
Confidence            89999987543   4699999999999999999  899999887654221110111100 0000000   0011112233


Q ss_pred             HHHHHhcCCCCCcEEEeCCcchHH--hhh---ccCCc-EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHH
Q 011355          154 QLQTQNSTGKPFDVIHTESVGLRH--TRA---RNLTN-VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVE  227 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~~~~~~--~~~---~~~p~-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (488)
                      .+.+..++. +||+||+|+.....  ...   .+.|. ++.+.|....             ..      ... ..     
T Consensus        75 ~l~~~l~~~-~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~-------------~~------~~~-~~-----  128 (359)
T PRK09922         75 NFSKWLKET-QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLD-------------HK------KHA-EC-----  128 (359)
T ss_pred             HHHHHHHhc-CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccc-------------cc------chh-hh-----
Confidence            333444443 89999999743211  111   12231 4444453100             00      000 00     


Q ss_pred             HhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeec--cc
Q 011355          228 EVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV--KD  305 (488)
Q Consensus       228 ~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~--~~  305 (488)
                        ..+..+|.++++|+..++.+.+ +|++.+++.++|||+|.+.+.....           ..+++++++++||+.  +.
T Consensus       129 --~~~~~~d~~i~~S~~~~~~~~~-~~~~~~ki~vi~N~id~~~~~~~~~-----------~~~~~~~i~~~Grl~~~~~  194 (359)
T PRK09922        129 --KKITCADYHLAISSGIKEQMMA-RGISAQRISVIYNPVEIKTIIIPPP-----------ERDKPAVFLYVGRLKFEGQ  194 (359)
T ss_pred             --hhhhcCCEEEEcCHHHHHHHHH-cCCCHHHEEEEcCCCCHHHccCCCc-----------ccCCCcEEEEEEEEecccC
Confidence              1136799999999999999987 7888889999999999654322111           012237889999996  46


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccC--HHHHHHHHHhcCEEEeCCCC
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLD--QTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~--~~~l~~~~~~adv~v~ps~~  377 (488)
                      ||++.+++++.++.       ++++|+++|+|+..+.+++      +.++|+|+|+++  .+++.++|+.+|++|+||. 
T Consensus       195 k~~~~l~~a~~~~~-------~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~-  266 (359)
T PRK09922        195 KNVKELFDGLSQTT-------GEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSK-  266 (359)
T ss_pred             cCHHHHHHHHHhhC-------CCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCc-
Confidence            99999999998873       5799999999998776665      347899999874  4889999999999999997 


Q ss_pred             CCCCChHHHHHHHcCCcEEEeC-CCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCC
Q 011355          378 AQGLDHTVLEAMLSGKPLMATR-LASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFT  455 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~~-~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs  455 (488)
                      .||||++++||||||+|||+++ .+|.. |++.++.+|+++++ |+++++++|.+++++ ++.+.   .++......+|+
T Consensus       267 ~Egf~~~~lEAma~G~Pvv~s~~~~g~~-eiv~~~~~G~lv~~~d~~~la~~i~~l~~~-~~~~~---~~~~~~~~~~~~  341 (359)
T PRK09922        267 FEGFPMTLLEAMSYGIPCISSDCMSGPR-DIIKPGLNGELYTPGNIDEFVGKLNKVISG-EVKYQ---HDAIPNSIERFY  341 (359)
T ss_pred             ccCcChHHHHHHHcCCCEEEeCCCCChH-HHccCCCceEEECCCCHHHHHHHHHHHHhC-cccCC---HHHHHHHHHHhh
Confidence            4999999999999999999999 88877 89999999999998 999999999999999 65331   223333335578


Q ss_pred             HHHHHHHHHHHHHHhhc
Q 011355          456 ATKMAAAYERLFLCISN  472 (488)
Q Consensus       456 ~~~~~~~~~~~~~~~~~  472 (488)
                      .+++.+++.++|+.+++
T Consensus       342 ~~~~~~~~~~~~~~~~~  358 (359)
T PRK09922        342 EVLYFKNLNNALFSKLQ  358 (359)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            88899999999988765

>PLN02846 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=4.9e-37  Score=295.83  Aligned_cols=349  Identities=13%  Similarity=0.058  Sum_probs=235.1

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCCCCCC---------------CC------CCCce
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRG-HELHIFTASCLNCSF---------------PT------YPISS  132 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~~~---------------~~------~~~~~  132 (488)
                      ++|||++++..|+|  ..+|+......++..|+++| |+|+|+.+.......               ..      .....
T Consensus         3 ~~mrIaivTdt~lP--~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v   80 (462)
T PLN02846          3 KKQHIAIFTTASLP--WMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERI   80 (462)
T ss_pred             CCCEEEEEEcCCCC--CCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeE
Confidence            57999999999998  78999999999999999999 799999986532100               00      00111


Q ss_pred             EEEecCCCCccCc-c----hhHHHHHHHHHHhcCCCCCcEEEeCCcchHHhh-------hccCCcEEEeeeCCcchhhhh
Q 011355          133 LYFHLSKPTAAGY-L----DQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTR-------ARNLTNVVVSWHGIAYETIHS  200 (488)
Q Consensus       133 i~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~-------~~~~p~~v~~~h~~~~~~~~~  200 (488)
                      +.+.......+.. +    ........+....... +|||||+++.....+.       .+..+ ++.++|.....+.+ 
T Consensus        81 ~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~-~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~-  157 (462)
T PLN02846         81 SFLPKFSIKFYPGKFSTDKRSILPVGDISETIPDE-EADIAVLEEPEHLTWYHHGKRWKTKFRL-VIGIVHTNYLEYVK-  157 (462)
T ss_pred             EEecccccccCcccccccccccCChHHHHHHHHhc-CCCEEEEcCchhhhhHHHHHHHHhcCCc-EEEEECCChHHHHH-
Confidence            1111111100011 0    0000112233333333 8999999987654443       12234 67788873322111 


Q ss_pred             hhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccch
Q 011355          201 DIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGK  280 (488)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~  280 (488)
                             ..........+.+.+.++...  +  .+|.++++|+...+ +.+       .+.+..+|||.+.|.+....  
T Consensus       158 -------~~~~g~~~~~l~~~~~~~~~r--~--~~d~vi~pS~~~~~-l~~-------~~i~~v~GVd~~~f~~~~~~--  216 (462)
T PLN02846        158 -------REKNGRVKAFLLKYINSWVVD--I--YCHKVIRLSAATQD-YPR-------SIICNVHGVNPKFLEIGKLK--  216 (462)
T ss_pred             -------HhccchHHHHHHHHHHHHHHH--H--hcCEEEccCHHHHH-Hhh-------CEEecCceechhhcCCCccc--
Confidence                   001101112233333333321  1  38999999986655 332       23444589999988765432  


Q ss_pred             hhhhhhCCCCCC-cEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhC-----CcEEEeC
Q 011355          281 DFKKKFGIPENR-SLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLG-----TNVIVLG  354 (488)
Q Consensus       281 ~~r~~~~i~~~~-~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~-----~~V~~~g  354 (488)
                       .++.++ +.+. ...++|+||+.++||++.+++|++++.+..    ++++|+|+|+||.++.++++.     +...|.|
T Consensus       217 -~~~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~----~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G  290 (462)
T PLN02846        217 -LEQQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKEL----SGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPG  290 (462)
T ss_pred             -HhhhcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhC----CCeEEEEECCCccHHHHHHHHHhcCCcEEEECC
Confidence             333333 2332 146889999999999999999999998877    899999999999998877643     1224677


Q ss_pred             ccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhc
Q 011355          355 PLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWAD  434 (488)
Q Consensus       355 ~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~  434 (488)
                      ..+.   .++|+.+|+||+||. .|+||++++||||||+|||+++.++ . +++.++.+|++++ |.+++++++.+++.+
T Consensus       291 ~~~~---~~~~~~~DvFv~pS~-~Et~g~v~lEAmA~G~PVVa~~~~~-~-~~v~~~~ng~~~~-~~~~~a~ai~~~l~~  363 (462)
T PLN02846        291 RDHA---DPLFHDYKVFLNPST-TDVVCTTTAEALAMGKIVVCANHPS-N-EFFKQFPNCRTYD-DGKGFVRATLKALAE  363 (462)
T ss_pred             CCCH---HHHHHhCCEEEECCC-cccchHHHHHHHHcCCcEEEecCCC-c-ceeecCCceEecC-CHHHHHHHHHHHHcc
Confidence            6443   379999999999997 5999999999999999999999997 4 8899999999997 899999999999986


Q ss_pred             CHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          435 GREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       435 ~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                      ++   ..++.+++    +.|||+.+.+++.++|+-
T Consensus       364 ~~---~~~~~~a~----~~~SWe~~~~~l~~~~~~  391 (462)
T PLN02846        364 EP---APLTDAQR----HELSWEAATERFLRVADL  391 (462)
T ss_pred             Cc---hhHHHHHH----HhCCHHHHHHHHHHHhcc
Confidence            33   22233332    469999999999999974

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=100.00  E-value=1e-38  Score=282.24  Aligned_cols=354  Identities=21%  Similarity=0.258  Sum_probs=261.3

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC---CCCceEEEecCCC-CccCcchhHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT---YPISSLYFHLSKP-TAAGYLDQSIVW  152 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~---~~~~~i~~~~~~~-~~~~~~~~~~~~  152 (488)
                      ++|+++++.|.|  ..||++.+++.|.+.|.+.||.|.++|-..++...-.   .+...++.+.... ...........+
T Consensus         1 ~~i~mVsdff~P--~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~   78 (426)
T KOG1111|consen    1 SRILMVSDFFYP--STGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDF   78 (426)
T ss_pred             CcceeeCccccc--CCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccC
Confidence            478999998876  8999999999999999999999999998765542221   2222222221110 000111111122


Q ss_pred             HHHHHHhcCCCCCcEEEeCCcc-------hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHH
Q 011355          153 QQLQTQNSTGKPFDVIHTESVG-------LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKV  225 (488)
Q Consensus       153 ~~~~~~~~~~~~~Dvv~~~~~~-------~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      ..++....++ +..+||.|+..       +.+....+.. .+.+-|......   +            ....+...+.. 
T Consensus        79 Pllr~i~lrE-~I~ivhghs~fS~lahe~l~hartMGlk-tVfTdHSlfGfa---d------------~~si~~n~ll~-  140 (426)
T KOG1111|consen   79 PLLRPILLRE-RIEIVHGHSPFSYLAHEALMHARTMGLK-TVFTDHSLFGFA---D------------IGSILTNKLLP-  140 (426)
T ss_pred             cccchhhhhh-ceEEEecCChHHHHHHHHHHHHHhcCce-EEEecccccccc---c------------hhhhhhcceee-
Confidence            2333333333 89999999743       2333334445 888888743211   1            00111222111 


Q ss_pred             HHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccc
Q 011355          226 VEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKD  305 (488)
Q Consensus       226 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~  305 (488)
                          -.+...|++||+|...++...-+-.+++.++.+|||.++...|.|.+.++         +.++...++.+||+..+
T Consensus       141 ----~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~---------~S~~i~~ivv~sRLvyr  207 (426)
T KOG1111|consen  141 ----LSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADK---------PSADIITIVVASRLVYR  207 (426)
T ss_pred             ----eeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCcccc---------CCCCeeEEEEEeeeeec
Confidence                34678999999999998876654568899999999999999998865542         34444789999999999


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCC
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ  379 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~e  379 (488)
                      ||+|.+++++.++.+++    |+++++|+|+||.+..+++      ++++|.++|.++++++.+.|.+.|+|++||+ .|
T Consensus       208 KGiDll~~iIp~vc~~~----p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSl-TE  282 (426)
T KOG1111|consen  208 KGIDLLLEIIPSVCDKH----PEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSL-TE  282 (426)
T ss_pred             cchHHHHHHHHHHHhcC----CCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHH-HH
Confidence            99999999999999999    9999999999996544443      6799999999999999999999999999998 69


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKM  459 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~  459 (488)
                      .|+++++||++||+|||++++||++ |++-++ .-++-+++++++++++++.+.. -   ...-....+.+.+.|+|+.+
T Consensus       283 afc~~ivEAaScGL~VVsTrVGGIp-eVLP~d-~i~~~~~~~~dl~~~v~~ai~~-~---~~~p~~~h~~v~~~y~w~dV  356 (426)
T KOG1111|consen  283 AFCMVIVEAASCGLPVVSTRVGGIP-EVLPED-MITLGEPGPDDLVGAVEKAITK-L---RTLPLEFHDRVKKMYSWKDV  356 (426)
T ss_pred             HHHHHHHHHHhCCCEEEEeecCCcc-ccCCcc-ceeccCCChHHHHHHHHHHHHH-h---ccCchhHHHHHHHhccHHHH
Confidence            9999999999999999999999999 777555 3333444899999999988875 2   22235556778888999999


Q ss_pred             HHHHHHHHHHhhccc
Q 011355          460 AAAYERLFLCISNDE  474 (488)
Q Consensus       460 ~~~~~~~~~~~~~~~  474 (488)
                      +++.+.+|.++.+.+
T Consensus       357 a~rTekvy~r~~~t~  371 (426)
T KOG1111|consen  357 AERTEKVYDRAATTS  371 (426)
T ss_pred             HHHHHHHHHHHhhcc
Confidence            999999999988743

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.4e-37  Score=310.47  Aligned_cols=281  Identities=22%  Similarity=0.271  Sum_probs=218.9

Q ss_pred             CCCcEEEeCCcchH---H---hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCcc
Q 011355          163 KPFDVIHTESVGLR---H---TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYA  236 (488)
Q Consensus       163 ~~~Dvv~~~~~~~~---~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (488)
                      .++|++|+|+.+..   .   ....++| ++++.|+........++....  .........+.+......  ...++++|
T Consensus       172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p-~I~t~Hg~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~l~--~~~~~~ad  246 (475)
T cd03813         172 PKADVYHAVSTGYAGLLGALAKARRGTP-FLLTEHGIYTRERKIELLQAD--WEMSYFRRLWIRFFESLG--RLAYQAAD  246 (475)
T ss_pred             CCCCEEeccCcchHHHHHHHHHHHhCCC-EEEecCCccHHHHHHHHHhcc--cchHHHHHHHHHHHHHHH--HHHHHhCC
Confidence            37999999985432   1   2234567 999999975432111111100  001111111222222221  24678999


Q ss_pred             EEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHH
Q 011355          237 HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK  316 (488)
Q Consensus       237 ~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~  316 (488)
                      .|+++|+..++...+ +|.+++|+.+||||+|.+.+.+....        ..+++ +++++++||+.+.||++.+++|++
T Consensus       247 ~Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~--------~~~~~-~~~i~~vGrl~~~Kg~~~li~a~~  316 (475)
T cd03813         247 RITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA--------RPEKE-PPVVGLIGRVVPIKDIKTFIRAAA  316 (475)
T ss_pred             EEEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc--------ccCCC-CcEEEEEeccccccCHHHHHHHHH
Confidence            999999999988766 78888999999999999877654321        11233 388999999999999999999999


Q ss_pred             HhHhhccCCCCCeEEEEEeCCCch----hHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHH
Q 011355          317 QLLAENDTFRRSTVFLVAGDGPWG----ARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVL  386 (488)
Q Consensus       317 ~l~~~~~~~~~~~~l~ivG~g~~~----~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~l  386 (488)
                      .+.++.    |+++++|+|+++..    +++++      +.++|+|+|   .+++.++|+.+|++|+||. .||+|++++
T Consensus       317 ~l~~~~----p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~-~Eg~p~~vl  388 (475)
T cd03813         317 IVRKKI----PDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSI-SEGQPLVIL  388 (475)
T ss_pred             HHHHhC----CCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCch-hhcCChHHH
Confidence            999888    89999999988532    22222      347999999   5689999999999999997 599999999


Q ss_pred             HHHHcCCcEEEeCCCCcccceeec------CCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHH
Q 011355          387 EAMLSGKPLMATRLASIVGSVIVG------TDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKM  459 (488)
Q Consensus       387 EAma~G~PVI~~~~~~~~~e~v~~------~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~  459 (488)
                      |||+||+|||+|+.|+.. |++.+      |.+|+++++ |+++++++|.+++++ ++.+++|++++++++.+.|+|+++
T Consensus       389 EAma~G~PVVatd~g~~~-elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~  466 (475)
T cd03813         389 EAMAAGIPVVATDVGSCR-ELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERM  466 (475)
T ss_pred             HHHHcCCCEEECCCCChH-HHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHH
Confidence            999999999999999998 88887      569999999 999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHH
Q 011355          460 AAAYERLFL  468 (488)
Q Consensus       460 ~~~~~~~~~  468 (488)
                      +++|.++|+
T Consensus       467 ~~~y~~lY~  475 (475)
T cd03813         467 IDSYRRLYL  475 (475)
T ss_pred             HHHHHHHhC
Confidence            999999984

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.1e-36  Score=294.25  Aligned_cols=339  Identities=22%  Similarity=0.251  Sum_probs=245.9

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQT  157 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ||+++++. ++  ..||+++++.+++++|.+.||+|++++.......................   .....    ..+..
T Consensus         1 kI~~v~~~-~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~   70 (366)
T cd03822           1 RIALVSPY-PP--RKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLD---NPLDY----RRAAR   70 (366)
T ss_pred             CeEEecCC-CC--CCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecC---CchhH----HHHHH
Confidence            78999864 43  47999999999999999999999999877644332221110001111110   11111    22222


Q ss_pred             HhcCCCCCcEEEeCCc------chHHhh-----hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHH
Q 011355          158 QNSTGKPFDVIHTESV------GLRHTR-----ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVV  226 (488)
Q Consensus       158 ~~~~~~~~Dvv~~~~~------~~~~~~-----~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ..... +||+||++..      ......     ..+.| ++.+.|+....             ..    ......+.+  
T Consensus        71 ~~~~~-~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~-------------~~----~~~~~~~~~--  129 (366)
T cd03822          71 AIRLS-GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIP-VVVTLHTVLLH-------------EP----RPGDRALLR--  129 (366)
T ss_pred             HHhhc-CCCEEEEeeccccccchhhHHHHHHHhhcCCC-EEEEEecCCcc-------------cc----chhhhHHHH--
Confidence            22222 8999999751      111111     14556 99999995110             00    011111111  


Q ss_pred             HHhhhcCCccEEEEcC-hhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccc
Q 011355          227 EEVKFFPKYAHHVATS-DHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKD  305 (488)
Q Consensus       227 ~~~~~~~~~d~ii~~S-~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~  305 (488)
                         ..++.+|.++++| +...+.+.. .  ...++.++|||+|...+......     ++...+.++ ++++++|++.+.
T Consensus       130 ---~~~~~~d~ii~~s~~~~~~~~~~-~--~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~-~~i~~~G~~~~~  197 (366)
T cd03822         130 ---LLLRRADAVIVMSSELLRALLLR-A--YPEKIAVIPHGVPDPPAEPPESL-----KALGGLDGR-PVLLTFGLLRPY  197 (366)
T ss_pred             ---HHHhcCCEEEEeeHHHHHHHHhh-c--CCCcEEEeCCCCcCcccCCchhh-----HhhcCCCCC-eEEEEEeeccCC
Confidence               4467899999996 333333322 1  14799999999998766543211     233334444 789999999999


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhH---------Hhh--hCCcEEEeCc-cCHHHHHHHHHhcCEEEe
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGAR---------YRD--LGTNVIVLGP-LDQTRLAMFYNAIDIFVN  373 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~---------~~~--l~~~V~~~g~-v~~~~l~~~~~~adv~v~  373 (488)
                      ||++.+++|+..+.++.    ++++|+++|++.....         +++  +.++|.|.|. ++.+++.++|+.||++++
T Consensus       198 K~~~~ll~a~~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~  273 (366)
T cd03822         198 KGLELLLEALPLLVAKH----PDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVL  273 (366)
T ss_pred             CCHHHHHHHHHHHHhhC----CCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEe
Confidence            99999999999999888    8999999998754321         223  3479999987 999999999999999999


Q ss_pred             CCCCCC--CCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011355          374 PTLRAQ--GLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRG  450 (488)
Q Consensus       374 ps~~~e--g~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~  450 (488)
                      ||. .|  ++|++++|||++|+|||+++.++ . +.+.++.+|+++++ |+++++++|.+++++ ++.+.+|++++++.+
T Consensus       274 ps~-~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~-~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~  349 (366)
T cd03822         274 PYR-SADQTQSGVLAYAIGFGKPVISTPVGH-A-EEVLDGGTGLLVPPGDPAALAEAIRRLLAD-PELAQALRARAREYA  349 (366)
T ss_pred             ccc-ccccccchHHHHHHHcCCCEEecCCCC-h-heeeeCCCcEEEcCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHH
Confidence            997 58  99999999999999999999999 6 66788889999998 999999999999998 899999999999999


Q ss_pred             hhhCCHHHHHHHHHHHHH
Q 011355          451 LNLFTATKMAAAYERLFL  468 (488)
Q Consensus       451 ~~~fs~~~~~~~~~~~~~  468 (488)
                      .+ |||+++++++.++|+
T Consensus       350 ~~-~s~~~~~~~~~~~~~  366 (366)
T cd03822         350 RA-MSWERVAERYLRLLA  366 (366)
T ss_pred             hh-CCHHHHHHHHHHHhC
Confidence            88 999999999999873

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3e-36  Score=295.41  Aligned_cols=361  Identities=24%  Similarity=0.261  Sum_probs=261.1

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC------CCCceEEE---ecCCCCccCc---
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT------YPISSLYF---HLSKPTAAGY---  145 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~------~~~~~i~~---~~~~~~~~~~---  145 (488)
                      ||++++..+|+  ..||.+.++..++++|+++||+|++++..........      .....+.+   ..........   
T Consensus         1 kIl~i~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (394)
T cd03794           1 KILILSQYFPP--ELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGLLKR   78 (394)
T ss_pred             CEEEEecccCC--ccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCccchHHH
Confidence            68999998877  3499999999999999999999999998764443322      11122222   2211111011   


Q ss_pred             -c-hhHHHHHHHHHHhcCCCCCcEEEeCCcc----hH-Hhhh--ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHH
Q 011355          146 -L-DQSIVWQQLQTQNSTGKPFDVIHTESVG----LR-HTRA--RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAY  216 (488)
Q Consensus       146 -~-~~~~~~~~~~~~~~~~~~~Dvv~~~~~~----~~-~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~  216 (488)
                       . .....+...........+||+||++...    .. ....  .+.| +++.+|+.+........     .........
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~~-----~~~~~~~~~  152 (394)
T cd03794          79 LLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAP-FVLEVRDLWPESAVALG-----LLKNGSLLY  152 (394)
T ss_pred             HHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCC-EEEEehhhcchhHHHcc-----CccccchHH
Confidence             0 1111122222222122389999999721    11 1111  2456 89999986543221110     001101101


Q ss_pred             HHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEE
Q 011355          217 ALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVL  296 (488)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i  296 (488)
                      .+...+.     ...++.+|.++++|+...+.+.. ++.+..++.++|||+|...+........  +++.....+. +++
T Consensus       153 ~~~~~~~-----~~~~~~~d~vi~~s~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~i  223 (394)
T cd03794         153 RLLRKLE-----RLIYRRADAIVVISPGMREYLVR-RGVPPEKISVIPNGVDLELFKPPPADES--LRKELGLDDK-FVV  223 (394)
T ss_pred             HHHHHHH-----HHHHhcCCEEEEECHHHHHHHHh-cCCCcCceEEcCCCCCHHHcCCccchhh--hhhccCCCCc-EEE
Confidence            2222222     24578999999999999999984 7788899999999999876655432211  3333334444 899


Q ss_pred             EEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh-----hCCcEEEeCccCHHHHHHHHHhcCEE
Q 011355          297 GMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-----LGTNVIVLGPLDQTRLAMFYNAIDIF  371 (488)
Q Consensus       297 ~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-----l~~~V~~~g~v~~~~l~~~~~~adv~  371 (488)
                      +++|++.+.||++.+++++..+.+.     ++++++++|+|+..+.+++     ..++|.+.|+++.+++.++|+.||++
T Consensus       224 ~~~G~~~~~k~~~~l~~~~~~l~~~-----~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~  298 (394)
T cd03794         224 LYAGNIGRAQGLDTLLEAAALLKDR-----PDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVG  298 (394)
T ss_pred             EEecCcccccCHHHHHHHHHHHhhc-----CCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCee
Confidence            9999999999999999999998753     4899999999887766554     12789999999999999999999999


Q ss_pred             EeCCCCCCC-----CChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011355          372 VNPTLRAQG-----LDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLV  445 (488)
Q Consensus       372 v~ps~~~eg-----~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~  445 (488)
                      ++|+.. |+     +|++++|||++|+|||+++.++.. +.+.++++|+++++ |+++++++|.+++++ ++.+++++++
T Consensus       299 i~~~~~-~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~  375 (394)
T cd03794         299 LVPLKP-GPAFEGVSPSKLFEYMAAGKPVLASVDGESA-ELVEEAGAGLVVPPGDPEALAAAILELLDD-PEERAEMGEN  375 (394)
T ss_pred             EEeccC-cccccccCchHHHHHHHCCCcEEEecCCCch-hhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHHHHHHHHH
Confidence            999974 54     488899999999999999999988 88888899999999 999999999999988 9999999999


Q ss_pred             HHHHHhhhCCHHHHHHHH
Q 011355          446 ARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       446 a~~~~~~~fs~~~~~~~~  463 (488)
                      +++++.++|||+.++++|
T Consensus       376 ~~~~~~~~~s~~~~~~~~  393 (394)
T cd03794         376 GRRYVEEKFSREKLAERL  393 (394)
T ss_pred             HHHHHHHhhcHHHHHHhc
Confidence            999999899999999876

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8e-36  Score=292.40  Aligned_cols=360  Identities=15%  Similarity=0.089  Sum_probs=241.3

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCC---------C-CC---CCCceEEEe-c---C
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKR--GHELHIFTASCLNCS---------F-PT---YPISSLYFH-L---S  138 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~---------~-~~---~~~~~i~~~-~---~  138 (488)
                      -|+|+++.   ....||+||.+...+.+|++.  ||+|+++|.......         . ..   .....+.+. .   .
T Consensus         2 ~~~f~hp~---~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~   78 (419)
T cd03806           2 TVGFFHPY---CNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLV   78 (419)
T ss_pred             eEEEECCC---CCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeee
Confidence            46788864   334459999999999999998  899999999865532         1 11   122222221 1   1


Q ss_pred             CCCccCc-chhH----HHHHHHHHHhcCCCCCcEEEeCC-cch--HHhh-hccCCcEEEeeeCCcchhhhhhhhHhh-hc
Q 011355          139 KPTAAGY-LDQS----IVWQQLQTQNSTGKPFDVIHTES-VGL--RHTR-ARNLTNVVVSWHGIAYETIHSDIIQEL-LR  208 (488)
Q Consensus       139 ~~~~~~~-~~~~----~~~~~~~~~~~~~~~~Dvv~~~~-~~~--~~~~-~~~~p~~v~~~h~~~~~~~~~~~~~~~-~~  208 (488)
                      .+...+. ....    ..+..+..... . +|||++.++ ...  +... ..+.| ++..+|- +...  .+..... .+
T Consensus        79 ~~~~~~r~~~~~~~~~~~~~~~~~~~~-~-~pDv~i~~~g~~~~~~~~~~~~~~~-~i~y~h~-P~~~--~d~l~~~~~~  152 (419)
T cd03806          79 EASTYPRFTLLGQALGSMILGLEALLK-L-VPDIFIDTMGYPFTYPLVRLLGGCP-VGAYVHY-PTIS--TDMLQKVRSR  152 (419)
T ss_pred             ccccCCceeeHHHHHHHHHHHHHHHHh-c-CCCEEEEcCCcccHHHHHHHhcCCe-EEEEecC-Ccch--HHHHHHHhhc
Confidence            1111111 1111    12222222222 2 799998886 222  2211 12456 8999992 2111  0111100 00


Q ss_pred             C----------CCC--hhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCc
Q 011355          209 T----------PEE--PQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDV  276 (488)
Q Consensus       209 ~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~  276 (488)
                      .          ...  ...+.++.++..... ...++.+|.++++|++.++.+.+.++. ..++.+|+||+|.+.+.+.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~-~~~~~~aD~ii~~S~~~~~~~~~~~~~-~~~~~vi~~gvd~~~~~~~~  230 (419)
T cd03806         153 EASYNNSATIARSPVLSKAKLLYYRLFAFLY-GLAGSFADVVMVNSTWTRNHIRSLWKR-NTKPSIVYPPCDVEELLKLP  230 (419)
T ss_pred             cccccCccchhccchHHHHHHHHHHHHHHHH-HHHhhcCCEEEECCHHHHHHHHHHhCc-CCCcEEEcCCCCHHHhcccc
Confidence            0          000  122334433333332 246799999999999999999986654 35899999999987665432


Q ss_pred             ccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccC-CCCCeEEEEEeCCCc------hhHHhh----
Q 011355          277 AMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDT-FRRSTVFLVAGDGPW------GARYRD----  345 (488)
Q Consensus       277 ~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~-~~~~~~l~ivG~g~~------~~~~~~----  345 (488)
                      ..         ...++ .+++++||+.+.||++.+++|++++.+..++ ..++++|+|+|++..      .+.+++    
T Consensus       231 ~~---------~~~~~-~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~  300 (419)
T cd03806         231 LD---------EKTRE-NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKE  300 (419)
T ss_pred             cc---------cccCC-cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHH
Confidence            10         11233 6899999999999999999999999887610 001499999998642      223332    


Q ss_pred             --hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceee---cCCceeEeCCC
Q 011355          346 --LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIV---GTDMGYLFSPQ  420 (488)
Q Consensus       346 --l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~---~~~~g~l~~~d  420 (488)
                        +.++|+|+|.++.+++..+|+.||++|+||. .|+||++++|||+||+|||+++.+|..++++.   ++.+|++++ |
T Consensus       301 l~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~-~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~-d  378 (419)
T cd03806         301 LGLEDKVEFVVNAPFEELLEELSTASIGLHTMW-NEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS-T  378 (419)
T ss_pred             hCCCCeEEEecCCCHHHHHHHHHhCeEEEECCc-cCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-C
Confidence              3479999999999999999999999999997 59999999999999999999999886557887   899999987 9


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHH
Q 011355          421 VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAA  461 (488)
Q Consensus       421 ~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~  461 (488)
                      +++++++|.++++++++.++.+ .++++.+.++||++.+.+
T Consensus       379 ~~~la~ai~~ll~~~~~~~~~~-~~~~~~~~~~fs~~~f~~  418 (419)
T cd03806         379 AEEYAEAIEKILSLSEEERLRI-RRAARSSVKRFSDEEFER  418 (419)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence            9999999999999845555555 555555678899998753

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5e-37  Score=297.98  Aligned_cols=335  Identities=19%  Similarity=0.260  Sum_probs=239.7

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-CCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-YPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      ||+++++.+    ..||.++++.+++++|.+.||+|++++.......... ....++.+.....   ...........+.
T Consensus         1 kIl~~~~~~----~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   73 (358)
T cd03812           1 KILHIVGTM----NRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIPA---RKKNPLKYFKKLY   73 (358)
T ss_pred             CEEEEeCCC----CCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEecC---CCccHHHHHHHHH
Confidence            689998755    6799999999999999999999999998764421111 0001111111111   1112222223333


Q ss_pred             HHhcCCCCCcEEEeCCcch---HHhhh--ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          157 TQNSTGKPFDVIHTESVGL---RHTRA--RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~---~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ...... +||+||+|+...   ..+..  ...|..+...|+......              ........   + ..+...
T Consensus        74 ~~~~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------------~~~~~~~~---~-~~~~~~  134 (358)
T cd03812          74 KLIKKN-KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHD--------------KKKKILKY---K-VLRKLI  134 (358)
T ss_pred             HHHhcC-CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccc--------------ccchhhHH---H-HHHHHH
Confidence            333333 899999997532   22222  234535666776432210              00001100   1 111134


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM  311 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~l  311 (488)
                      .+.+|.++++|+...+.+.+.  ....++.+||||+|.+.+......+.. +++.+...++ ++|+++||+.+.||++.+
T Consensus       135 ~~~~~~~i~~s~~~~~~~~~~--~~~~~~~vi~ngvd~~~~~~~~~~~~~-~~~~~~~~~~-~~i~~vGr~~~~Kg~~~l  210 (358)
T cd03812         135 NRLATDYLACSEEAGKWLFGK--VKNKKFKVIPNGIDLEKFIFNEEIRKK-RRELGILEDK-FVIGHVGRFSEQKNHEFL  210 (358)
T ss_pred             HhcCCEEEEcCHHHHHHHHhC--CCcccEEEEeccCcHHHcCCCchhhhH-HHHcCCCCCC-EEEEEEeccccccChHHH
Confidence            678999999999999988774  467899999999999877654433222 5556665555 899999999999999999


Q ss_pred             HHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHH
Q 011355          312 FEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTV  385 (488)
Q Consensus       312 l~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~  385 (488)
                      ++|+..+.+++    ++++++|+|+|+..+.+++      +.++|.++|+  .+++.++|+.||++|+||. .||+|+++
T Consensus       211 i~a~~~l~~~~----~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~-~E~~~~~~  283 (358)
T cd03812         211 IEIFAELLKKN----PNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSL-YEGLPLVL  283 (358)
T ss_pred             HHHHHHHHHhC----CCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEeccc-ccCCCHHH
Confidence            99999999888    8999999999987765554      3478999999  6689999999999999997 59999999


Q ss_pred             HHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 011355          386 LEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLN  452 (488)
Q Consensus       386 lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~  452 (488)
                      +|||++|+|||+++.++.. +++.+ +.|++..+ ++++++++|.+++++ ++.++.++.++......
T Consensus       284 lEAma~G~PvI~s~~~~~~-~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~-~~~~~~~~~~~~~~~~~  348 (358)
T cd03812         284 IEAQASGLPCILSDTITKE-VDLTD-LVKFLSLDESPEIWAEEILKLKSE-DRRERSSESIKKKGLDA  348 (358)
T ss_pred             HHHHHhCCCEEEEcCCchh-hhhcc-CccEEeCCCCHHHHHHHHHHHHhC-cchhhhhhhhhhccchh
Confidence            9999999999999999988 77777 45666655 789999999999999 88888888777666544

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>PLN00142 sucrose synthase

Probab=100.00  E-value=1.1e-36  Score=307.03  Aligned_cols=378  Identities=13%  Similarity=0.094  Sum_probs=249.2

Q ss_pred             CCceEEEEEecCC-------CCCCCCCcHHHHHHHHH--------HHHHHCCCeEE----EEecCCCCCCCC--------
Q 011355           74 LKLLKIALFVKKW-------PHRSHAGGLERHALTLH--------LALAKRGHELH----IFTASCLNCSFP--------  126 (488)
Q Consensus        74 ~~~mkIl~i~~~~-------p~~~~~gG~~~~~~~l~--------~~L~~~G~~V~----v~~~~~~~~~~~--------  126 (488)
                      |+-|||++++.+-       .-....||...|+.+++        +.|+++||+|+    |+|....+....        
T Consensus       277 p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~  356 (815)
T PLN00142        277 PMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEK  356 (815)
T ss_pred             hHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCCcccCccee
Confidence            3458999998643       22346788888887655        67778899874    888765433211        


Q ss_pred             CCCCceEEE---ecCCCC-----c---cCcchhHHHH-HHHHHHh-c-CCCCCcEEEeCCcc-----hHHhhhccCCcEE
Q 011355          127 TYPISSLYF---HLSKPT-----A---AGYLDQSIVW-QQLQTQN-S-TGKPFDVIHTESVG-----LRHTRARNLTNVV  187 (488)
Q Consensus       127 ~~~~~~i~~---~~~~~~-----~---~~~~~~~~~~-~~~~~~~-~-~~~~~Dvv~~~~~~-----~~~~~~~~~p~~v  187 (488)
                      ....++..+   +.....     +   ...|.+...+ ..+.... . ...+||+||.|.+.     .......++| .+
T Consensus       357 v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP-~v  435 (815)
T PLN00142        357 VSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVT-QC  435 (815)
T ss_pred             ccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCC-EE
Confidence            122222333   322210     0   0011111111 1111111 1 11269999999632     2233334789 99


Q ss_pred             EeeeCCcchhh-hhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHH-------HHHH-------
Q 011355          188 VSWHGIAYETI-HSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDV-------LKRI-------  252 (488)
Q Consensus       188 ~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~-------~~~~-------  252 (488)
                      .+.|....... +++....   ..     ...+....++..+...++.||.||+.|......       +...       
T Consensus       436 ~T~HsL~k~K~~~~~~~~~---~~-----e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~  507 (815)
T PLN00142        436 TIAHALEKTKYPDSDIYWK---KF-----DDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPG  507 (815)
T ss_pred             EEcccchhhhccccCCccc---cc-----chhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccch
Confidence            99997532211 1110000   00     111122222333445678899999988666531       2121       


Q ss_pred             -----hcC--CCCcEEEecCCccCCCcCCCcccc-----------------hhhhhhhCCC-CCCcEEEEEEeeeccccC
Q 011355          253 -----YMI--PEERVHVILNGVDEEVFKPDVAMG-----------------KDFKKKFGIP-ENRSLVLGMAGRLVKDKG  307 (488)
Q Consensus       253 -----~g~--~~~~i~vi~ngvd~~~~~~~~~~~-----------------~~~r~~~~i~-~~~~~~i~~~Grl~~~Kg  307 (488)
                           .|+  ...++.|||+|+|...|.+.....                 ...++.+|+. +.++.+|+++||+.+.||
T Consensus       508 L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KG  587 (815)
T PLN00142        508 LYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKN  587 (815)
T ss_pred             hhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCC
Confidence                 122  255899999999998776432111                 1124556652 222367889999999999


Q ss_pred             hHHHHHHHHHhHhhccCCCCCeEEEEEeCCC------chh------HHhh------hCCcEEEeCcc----CHHHHHHHH
Q 011355          308 HPLMFEALKQLLAENDTFRRSTVFLVAGDGP------WGA------RYRD------LGTNVIVLGPL----DQTRLAMFY  365 (488)
Q Consensus       308 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~------~~~------~~~~------l~~~V~~~g~v----~~~~l~~~~  365 (488)
                      ++.+++|+.++.+..    ++++|+|+|++.      ..+      .+.+      +.++|.|+|..    +.+++..++
T Consensus       588 id~LIeA~a~l~~l~----~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~i  663 (815)
T PLN00142        588 LTGLVEWYGKNKRLR----ELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYI  663 (815)
T ss_pred             HHHHHHHHHHHHHhC----CCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHH
Confidence            999999999887766    789999999862      111      1211      34789998853    346777777


Q ss_pred             H-hcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHH----hcCHHHH
Q 011355          366 N-AIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIW----ADGREVL  439 (488)
Q Consensus       366 ~-~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll----~~~~~~~  439 (488)
                      + .+|+||+||. .|+||++++|||+||+|||+|+.||.. |+|.++.+|+++++ |+++++++|.+++    .| ++.+
T Consensus       664 adaaDVfVlPS~-~EgFGLvvLEAMA~GlPVVATdvGG~~-EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~D-p~lr  740 (815)
T PLN00142        664 ADTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCQGGPA-EIIVDGVSGFHIDPYHGDEAANKIADFFEKCKED-PSYW  740 (815)
T ss_pred             HhhCCEEEeCCc-ccCCCHHHHHHHHcCCCEEEcCCCCHH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC-HHHH
Confidence            7 4799999997 599999999999999999999999998 99999999999999 9999999998754    56 9999


Q ss_pred             HHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          440 EKKGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       440 ~~~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                      ++|+++|++++.++|||+.+++++.++.
T Consensus       741 ~~mg~~Ar~rv~e~FSWe~~A~rll~L~  768 (815)
T PLN00142        741 NKISDAGLQRIYECYTWKIYAERLLTLG  768 (815)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            9999999999999999999999998865

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.6e-36  Score=290.22  Aligned_cols=355  Identities=28%  Similarity=0.378  Sum_probs=266.0

Q ss_pred             EEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCc-------eEEEecCCCCccCcchhHHH
Q 011355           79 IALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPIS-------SLYFHLSKPTAAGYLDQSIV  151 (488)
Q Consensus        79 Il~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~~~~~~~~  151 (488)
                      |++++..+|+. ..||.++++..++++|.+.||+|++++..............       ....................
T Consensus         1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (377)
T cd03798           1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLA   79 (377)
T ss_pred             CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHH
Confidence            57888888763 47999999999999999999999999987644432221000       00000000011122233334


Q ss_pred             HHHHHHHhc--CCCCCcEEEeCCcchH----Hhhh--ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHH
Q 011355          152 WQQLQTQNS--TGKPFDVIHTESVGLR----HTRA--RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERAS  223 (488)
Q Consensus       152 ~~~~~~~~~--~~~~~Dvv~~~~~~~~----~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      +..+.....  .. +||+|+++.....    ....  .++| ++...|+........               ........
T Consensus        80 ~~~~~~~l~~~~~-~~dii~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~---------------~~~~~~~~  142 (377)
T cd03798          80 ARALLKLLKLKRF-RPDLIHAHFAYPDGFAAALLKRKLGIP-LVVTLHGSDVNLLPR---------------KRLLRALL  142 (377)
T ss_pred             HHHHHHHHhcccC-CCCEEEEeccchHHHHHHHHHHhcCCC-EEEEeecchhcccCc---------------hhhHHHHH
Confidence            444444443  33 8999999863321    1111  2346 899999864432111               01111111


Q ss_pred             HHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeec
Q 011355          224 KVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV  303 (488)
Q Consensus       224 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~  303 (488)
                           ...++++|.++++|+..++.+.+.+ .+..++.+++||+|...+........   ++.+...++ +.++++|++.
T Consensus       143 -----~~~~~~~d~ii~~s~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~i~~~g~~~  212 (377)
T cd03798         143 -----RRALRRADAVIAVSEALADELKALG-IDPEKVTVIPNGVDTERFSPADRAEA---RKLGLPEDK-KVILFVGRLV  212 (377)
T ss_pred             -----HHHHhcCCeEEeCCHHHHHHHHHhc-CCCCceEEcCCCcCcccCCCcchHHH---HhccCCCCc-eEEEEeccCc
Confidence                 1456889999999999999999854 67889999999999987765433211   333333444 8899999999


Q ss_pred             cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC
Q 011355          304 KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       304 ~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~  377 (488)
                      +.||++.+++++..+.++.    ++++++++|.++..+.+++      +.++|.+.|+++++++.++|+.||++++||..
T Consensus       213 ~~k~~~~li~~~~~~~~~~----~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~  288 (377)
T cd03798         213 PRKGIDYLIEALARLLKKR----PDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLR  288 (377)
T ss_pred             cccCHHHHHHHHHHHHhcC----CCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence            9999999999999998877    8999999999887665544      34789999999999999999999999999975


Q ss_pred             CCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCH
Q 011355          378 AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTA  456 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~  456 (488)
                       |++|++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.  +++.++++.+.++|+|
T Consensus       289 -~~~~~~~~Ea~~~G~pvI~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~--~~~~~~~~~~~~~~s~  363 (377)
T cd03798         289 -EGFGLVLLEAMACGLPVVATDVGGIP-EIITDGENGLLVPPGDPEALAEAILRLLAD-PWL--RLGRAARRRVAERFSW  363 (377)
T ss_pred             -ccCChHHHHHHhcCCCEEEecCCChH-HHhcCCcceeEECCCCHHHHHHHHHHHhcC-cHH--HHhHHHHHHHHHHhhH
Confidence             99999999999999999999999987 88999999999999 999999999999998 665  7888999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 011355          457 TKMAAAYERLFLCI  470 (488)
Q Consensus       457 ~~~~~~~~~~~~~~  470 (488)
                      +.+++++.++|+++
T Consensus       364 ~~~~~~~~~~~~~l  377 (377)
T cd03798         364 ENVAERLLELYREV  377 (377)
T ss_pred             HHHHHHHHHHHhhC
Confidence            99999999998763

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.6e-35  Score=285.27  Aligned_cols=335  Identities=21%  Similarity=0.231  Sum_probs=244.8

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCc-cCcchhHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTA-AGYLDQSIVWQQLQ  156 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~  156 (488)
                      ||++++..+.+   .||.++.+..++++|.+.||+|++++....... .......+.+....... ............+.
T Consensus         1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (348)
T cd03820           1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGEPP-FYELDPKIKVIDLGDKRDSKLLARFKKLRRLR   76 (348)
T ss_pred             CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCCCC-ccccCCccceeecccccccchhccccchHHHH
Confidence            68899876532   799999999999999999999999998775411 11111112111111000 00111111222233


Q ss_pred             HHhcCCCCCcEEEeCCcc---hHHhhhccC-CcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhc
Q 011355          157 TQNSTGKPFDVIHTESVG---LRHTRARNL-TNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFF  232 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~---~~~~~~~~~-p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (488)
                      ...+.. +||+|+++...   +......+. | ++.+.|+.......                ......     .+...+
T Consensus        77 ~~l~~~-~~d~i~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~----------------~~~~~~-----~~~~~~  133 (348)
T cd03820          77 KLLKNN-KPDVVISFLTSLLTFLASLGLKIVK-LIVSEHNSPDAYKK----------------RLRRLL-----LRRLLY  133 (348)
T ss_pred             Hhhccc-CCCEEEEcCchHHHHHHHHhhcccc-EEEecCCCccchhh----------------hhHHHH-----HHHHHH
Confidence            333333 89999999754   222333333 5 88888875322110                000000     122567


Q ss_pred             CCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHH
Q 011355          233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMF  312 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll  312 (488)
                      +.+|.++++|+..+...   .+.+..++.++|||++...+...            .+.++ ..++++|++.+.||++.++
T Consensus       134 ~~~d~ii~~s~~~~~~~---~~~~~~~~~vi~~~~~~~~~~~~------------~~~~~-~~i~~~g~~~~~K~~~~l~  197 (348)
T cd03820         134 RRADAVVVLTEEDRALY---YKKFNKNVVVIPNPLPFPPEEPS------------SDLKS-KRILAVGRLVPQKGFDLLI  197 (348)
T ss_pred             hcCCEEEEeCHHHHHHh---hccCCCCeEEecCCcChhhcccc------------CCCCC-cEEEEEEeeccccCHHHHH
Confidence            89999999999987222   34567899999999998765433            01233 7889999999999999999


Q ss_pred             HHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHH
Q 011355          313 EALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVL  386 (488)
Q Consensus       313 ~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~l  386 (488)
                      +++..+.+..    ++++|+++|+++..+.+++      +.++|.+.|.  .+++..+|+.||++++||.. ||+|++++
T Consensus       198 ~~~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~-e~~~~~~~  270 (348)
T cd03820         198 EAWAKIAKKH----PDWKLRIVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRF-EGFPMVLL  270 (348)
T ss_pred             HHHHHHHhcC----CCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccc-cccCHHHH
Confidence            9999998877    8999999999887766553      3478999998  67999999999999999975 99999999


Q ss_pred             HHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 011355          387 EAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYE  464 (488)
Q Consensus       387 EAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~  464 (488)
                      |||++|+|||+++.++..++++.++.+|+++++ |+++++++|.+++++ ++.+++|++++++.+ ++|+|++++++|.
T Consensus       271 Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  347 (348)
T cd03820         271 EAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED-EELRKRMGANARESA-ERFSIENIIKQWE  347 (348)
T ss_pred             HHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH-HHhCHHHHHHHhc
Confidence            999999999999987655467777779999998 999999999999998 999999999997766 5699999998875

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.8e-35  Score=284.97  Aligned_cols=343  Identities=24%  Similarity=0.322  Sum_probs=253.6

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCC-CCCCCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCS-FPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      ||++++.      ..||.++++..++++|.+.||+|++++....... ....+.....+..... ....+.....+..+.
T Consensus         1 kIl~i~~------~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   73 (359)
T cd03808           1 KILHIVT------VDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDRR-GINPFKDLKALLRLY   73 (359)
T ss_pred             CeeEEEe------cchhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCCceEEecccccc-ccChHhHHHHHHHHH
Confidence            6888986      3689999999999999999999999998765442 1112222222222110 011222222333344


Q ss_pred             HHhcCCCCCcEEEeCCcch---HHhhh--ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          157 TQNSTGKPFDVIHTESVGL---RHTRA--RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~---~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ...+.. +||+||+++...   .....  ...+.++...|+..........            .......+.+     ..
T Consensus        74 ~~~~~~-~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~~~~~~~~~-----~~  135 (359)
T cd03808          74 RLLRKE-RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGL------------KRRLYLLLER-----LA  135 (359)
T ss_pred             HHHHhc-CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchh------------HHHHHHHHHH-----HH
Confidence            444333 899999986421   11111  2334478888875432211110            1122222222     34


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCC-CCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIP-EERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL  310 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~-~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~  310 (488)
                      ++.+|.++++|+...+.+.+.++.+ ..++.++++|+|...+......         .+.+ +++++++|++.+.||++.
T Consensus       136 ~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~i~~~G~~~~~k~~~~  205 (359)
T cd03808         136 LRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP---------IPED-DPVFLFVARLLKDKGIDE  205 (359)
T ss_pred             HhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc---------cCCC-CcEEEEEeccccccCHHH
Confidence            6788999999999999999855443 4577788899998776554321         1223 388999999999999999


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHh-----h--hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCCh
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYR-----D--LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDH  383 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~-----~--l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~  383 (488)
                      +++++..+.+++    ++++|+++|.++......     +  ..++|.+.|+  .+++.++|+.||++++||.. ||+|+
T Consensus       206 li~~~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ps~~-e~~~~  278 (359)
T cd03808         206 LLEAARILKAKG----PNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVLPSYR-EGLPR  278 (359)
T ss_pred             HHHHHHHHHhcC----CCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEecCcc-cCcch
Confidence            999999998877    899999999987654332     2  3478999999  66999999999999999975 99999


Q ss_pred             HHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHH
Q 011355          384 TVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAA  462 (488)
Q Consensus       384 ~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~  462 (488)
                      +++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++.+ ++.+.++++++++++.++|+|+.++++
T Consensus       279 ~~~Ea~~~G~Pvi~s~~~~~~-~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~  356 (359)
T cd03808         279 VLLEAMAMGRPVIATDVPGCR-EAVIDGVNGFLVPPGDAEALADAIERLIED-PELRARMGQAARKRAEEEFDEEIVVKK  356 (359)
T ss_pred             HHHHHHHcCCCEEEecCCCch-hhhhcCcceEEECCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            999999999999999999987 88888999999998 899999999999998 899999999999999999999999988


Q ss_pred             HH
Q 011355          463 YE  464 (488)
Q Consensus       463 ~~  464 (488)
                      +.
T Consensus       357 ~~  358 (359)
T cd03808         357 LL  358 (359)
T ss_pred             hh
Confidence            75

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.6e-34  Score=278.77  Aligned_cols=335  Identities=23%  Similarity=0.295  Sum_probs=247.9

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCce--EEEecCCCCccCcchhHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISS--LYFHLSKPTAAGYLDQSIVWQQL  155 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      ||++++..+    ..||.++.+..++++|.+.||+|.+++...............  ........   ...........+
T Consensus         1 kIl~~~~~~----~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   73 (353)
T cd03811           1 KILFVIPSL----GGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKL---KSLRDLLAILRL   73 (353)
T ss_pred             CeEEEeecc----cCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeec---ccccchhHHHHH
Confidence            688998855    369999999999999999999999999876544322211100  00110000   111112222233


Q ss_pred             HHHhcCCCCCcEEEeCCc-c--hHHhhhc--cCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhh
Q 011355          156 QTQNSTGKPFDVIHTESV-G--LRHTRAR--NLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVK  230 (488)
Q Consensus       156 ~~~~~~~~~~Dvv~~~~~-~--~~~~~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (488)
                      ....+.. +||+|+++.. .  +......  +.| .+.+.|+..........              ...      .....
T Consensus        74 ~~~~~~~-~~dii~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~--------------~~~------~~~~~  131 (353)
T cd03811          74 RRLLRKE-KPDVVISHLTTTPNVLALLAARLGTK-LIVWEHNSLSLELKRKL--------------RLL------LLIRK  131 (353)
T ss_pred             HHHHHhc-CCCEEEEcCccchhHHHHHHhhcCCc-eEEEEcCcchhhhccch--------------hHH------HHHHh
Confidence            3333333 8999999975 2  1222222  356 99999986543211100              000      11225


Q ss_pred             hcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHH
Q 011355          231 FFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL  310 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~  310 (488)
                      .++++|.++++|+..++.+.+.++.+..++.++|||+|...+........    +++.+.++ ++++++|++.+.||++.
T Consensus       132 ~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~-~~i~~~g~~~~~k~~~~  206 (353)
T cd03811         132 LYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL----ELGIPPDG-PVILAVGRLSPQKGFDT  206 (353)
T ss_pred             hccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh----hcCCCCCc-eEEEEEecchhhcChHH
Confidence            67899999999999999999987766789999999999887765433211    22334444 88999999999999999


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      +++++..+.++.    ++++|+++|.++..+.+++      +.++|.+.|+++  ++.++|+.||++++||.. ||+|++
T Consensus       207 ~i~~~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~~d~~i~ps~~-e~~~~~  279 (353)
T cd03811         207 LIRAFALLRKEG----PDARLVILGDGPLREELEALAKELGLADRVHFLGFQS--NPYPYLKAADLFVLSSRY-EGFPNV  279 (353)
T ss_pred             HHHHHHHhhhcC----CCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccC--CHHHHHHhCCEEEeCccc-CCCCcH
Confidence            999999999887    7999999999887665543      347899999954  899999999999999975 999999


Q ss_pred             HHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHH---HHHHHHHHhcCHHHHHHHHHHHHHHHhhhCC
Q 011355          385 VLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESV---KKALYGIWADGREVLEKKGLVARKRGLNLFT  455 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~l---a~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs  455 (488)
                      ++|||++|+|||+++.++.. |++.++.+|+++++ |.+++   ++.+..+.++ ++.+.++++++++.+.++|+
T Consensus       280 ~~Ea~~~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         280 LLEAMALGTPVVATDCPGPR-EILEDGENGLLVPVGDEAALAAAALALLDLLLD-PELRERLAAAARERVAREYS  352 (353)
T ss_pred             HHHHHHhCCCEEEcCCCChH-HHhcCCCceEEECCCCHHHHHHHHHHHHhccCC-hHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999987 89999999999998 88888   7788888888 88899999988888888776

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.9e-34  Score=278.78  Aligned_cols=340  Identities=20%  Similarity=0.218  Sum_probs=226.4

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecC--CCCc-cCcchhHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLS--KPTA-AGYLDQSIVWQQ  154 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~--~~~~-~~~~~~~~~~~~  154 (488)
                      ||++++..++   ..||+|+.+.++++.|.+  .+|..+............. ..+.....  .+.. .....+......
T Consensus         1 ~i~~~~~~~~---~~GG~E~~~~~l~~~l~~--~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (351)
T cd03804           1 KVAIVHDWLV---NIGGGEKVVEALARLFPD--ADIFTLVDDPDKLPRLLRL-KKIRTSFIQKLPFARRRYRKYLPLMPL   74 (351)
T ss_pred             CEEEEEeccc---cCCCHHHHHHHHHHhCCC--CCEEEEeecCCccchhhcC-CceeechhhhchhhHhhHhhhCchhhH
Confidence            6899997653   469999999999998864  2333333222111111111 11111111  1100 001111111111


Q ss_pred             HHHHhcCCCCCcEEEeCCcchHHhh--hccCCcEEEeeeCCcchhhhhhhhHhhhcC---CCChhHHHHHHHHHHHHHHh
Q 011355          155 LQTQNSTGKPFDVIHTESVGLRHTR--ARNLTNVVVSWHGIAYETIHSDIIQELLRT---PEEPQAYALAERASKVVEEV  229 (488)
Q Consensus       155 ~~~~~~~~~~~Dvv~~~~~~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  229 (488)
                      +....... ++|+|++++.......  ....| .+..+|......+  +........   ............+...  +.
T Consensus        75 ~~~~~~~~-~~D~v~~~~~~~~~~~~~~~~~~-~~~~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  148 (351)
T cd03804          75 AIEQFDLS-GYDLVISSSHAVAKGVITRPDQL-HICYCHTPMRYAW--DLYHDYLKESGLGKRLALRLLLHYLRIW--DR  148 (351)
T ss_pred             HHHhcccc-CCCEEEEcCcHHhccccCCCCCc-EEEEeCCchHHHh--cCchHhhhhcccchhhHHHHHHHHHHHH--HH
Confidence            22222222 8999999875433332  23455 6777776321110  000011000   0111111122222222  22


Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChH
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHP  309 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~  309 (488)
                      +.++++|.++++|+.+++.+.+.++.   +..+++||+|.+.+.+..             ..+ ..++++|++.+.||++
T Consensus       149 ~~~~~~d~ii~~S~~~~~~~~~~~~~---~~~vi~~~~d~~~~~~~~-------------~~~-~~il~~G~~~~~K~~~  211 (351)
T cd03804         149 RSAARVDYFIANSRFVARRIKKYYGR---DATVIYPPVDTDRFTPAE-------------EKE-DYYLSVGRLVPYKRID  211 (351)
T ss_pred             HHhcCCCEEEECCHHHHHHHHHHhCC---CcEEECCCCCHhhcCcCC-------------CCC-CEEEEEEcCccccChH
Confidence            55799999999999999999886653   468999999987765432             122 3577999999999999


Q ss_pred             HHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh-hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHH
Q 011355          310 LMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEA  388 (488)
Q Consensus       310 ~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEA  388 (488)
                      .+++|++.+        + ++|+|+|+|+..+.+++ ..++|+|+|+++++++.++|+.||++++||.  |+||++++||
T Consensus       212 ~li~a~~~~--------~-~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~--e~~g~~~~Ea  280 (351)
T cd03804         212 LAIEAFNKL--------G-KRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAE--EDFGIVPVEA  280 (351)
T ss_pred             HHHHHHHHC--------C-CcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCc--CCCCchHHHH
Confidence            999999876        5 78999999988776664 4589999999999999999999999999994  9999999999


Q ss_pred             HHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          389 MLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       389 ma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      |+||+|||+++.++.. |++.++.+|+++++ |+++++++|..++++ ++   .+++++++.+. +|+|+.+.+++
T Consensus       281 ma~G~Pvi~~~~~~~~-e~i~~~~~G~~~~~~~~~~la~~i~~l~~~-~~---~~~~~~~~~~~-~~~~~~~~~~~  350 (351)
T cd03804         281 MASGTPVIAYGKGGAL-ETVIDGVTGILFEEQTVESLAAAVERFEKN-ED---FDPQAIRAHAE-RFSESRFREKI  350 (351)
T ss_pred             HHcCCCEEEeCCCCCc-ceeeCCCCEEEeCCCCHHHHHHHHHHHHhC-cc---cCHHHHHHHHH-hcCHHHHHHHh
Confidence            9999999999999988 89999999999998 999999999999998 53   23445555554 48999988765

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2e-33  Score=275.19  Aligned_cols=215  Identities=21%  Similarity=0.311  Sum_probs=189.5

Q ss_pred             hcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHH
Q 011355          231 FFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL  310 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~  310 (488)
                      .++++|.++++|+..++.+.+.++...+++.+++||++...+....            ..++++.++++|++.+.||++.
T Consensus       180 ~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~------------~~~~~~~il~~Grl~~~Kg~~~  247 (407)
T cd04946         180 LLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISKP------------SKDDTLRIVSCSYLVPVKRVDL  247 (407)
T ss_pred             HHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCCC------------CCCCCEEEEEeeccccccCHHH
Confidence            4678999999999999999998888888999999999886554321            1123388999999999999999


Q ss_pred             HHHHHHHhHhhccCCCC--CeEEEEEeCCCchhHHhhh------CCcEEEeCccCHHHHHHHHHh--cCEEEeCCCCCCC
Q 011355          311 MFEALKQLLAENDTFRR--STVFLVAGDGPWGARYRDL------GTNVIVLGPLDQTRLAMFYNA--IDIFVNPTLRAQG  380 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~--~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~~eg  380 (488)
                      +++|+..+.+++    |  +++++++|+|+..+.++++      .++|+|+|+++.+++..+|+.  +|++++||. .||
T Consensus       248 li~a~~~l~~~~----p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~-~Eg  322 (407)
T cd04946         248 IIKALAALAKAR----PSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSE-SEG  322 (407)
T ss_pred             HHHHHHHHHHhC----CCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCc-ccc
Confidence            999999999876    5  5677889999877666542      367999999999999999986  788999997 599


Q ss_pred             CChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC--CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHH
Q 011355          381 LDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP--QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATK  458 (488)
Q Consensus       381 ~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~--d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~  458 (488)
                      +|++++|||++|+|||+|++||.+ |++.++.+|+++++  |+++++++|.+++++ ++.+++|+++|++.+.++|+++.
T Consensus       323 ~p~~llEAma~G~PVIas~vgg~~-e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~~~~f~~~~  400 (407)
T cd04946         323 LPVSIMEAMSFGIPVIATNVGGTP-EIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKWEENFNASK  400 (407)
T ss_pred             ccHHHHHHHHcCCCEEeCCCCCcH-HHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHH
Confidence            999999999999999999999998 89999989999986  799999999999998 99999999999999999999999


Q ss_pred             HHHHHH
Q 011355          459 MAAAYE  464 (488)
Q Consensus       459 ~~~~~~  464 (488)
                      ..+++.
T Consensus       401 ~~~~~~  406 (407)
T cd04946         401 NYREFA  406 (407)
T ss_pred             hHHHhc
Confidence            988874

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>PHA01630 putative group 1 glycosyl transferase

Probab=100.00  E-value=6.7e-33  Score=261.18  Aligned_cols=217  Identities=16%  Similarity=0.178  Sum_probs=176.7

Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCC-CCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIP-EERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL  310 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~-~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~  310 (488)
                      .+++|.++++|+.+++.+.+ .|++ ++++.+||||+|.+.|.+....           .+.+++++++|++.+.||++.
T Consensus        92 ~~~ad~ii~~S~~~~~~l~~-~g~~~~~~i~vIpNGVd~~~f~~~~~~-----------~~~~~vl~~~g~~~~~Kg~d~  159 (331)
T PHA01630         92 NQPVDEIVVPSQWSKNAFYT-SGLKIPQPIYVIPHNLNPRMFEYKPKE-----------KPHPCVLAILPHSWDRKGGDI  159 (331)
T ss_pred             hccCCEEEECCHHHHHHHHH-cCCCCCCCEEEECCCCCHHHcCCCccc-----------cCCCEEEEEeccccccCCHHH
Confidence            47899999999999999987 5655 5689999999998877543221           123377778889999999999


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHH
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAML  390 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma  390 (488)
                      +++|++.+.++.    ++++++++|+++....+..+.   .+.|.++.+++..+|+.||++++||. .||||++++||||
T Consensus       160 Li~A~~~l~~~~----~~~~llivG~~~~~~~l~~~~---~~~~~v~~~~l~~~y~~aDv~v~pS~-~E~fgl~~lEAMA  231 (331)
T PHA01630        160 VVKIFHELQNEG----YDFYFLIKSSNMLDPRLFGLN---GVKTPLPDDDIYSLFAGCDILFYPVR-GGAFEIPVIEALA  231 (331)
T ss_pred             HHHHHHHHHhhC----CCEEEEEEeCcccchhhcccc---ceeccCCHHHHHHHHHhCCEEEECCc-cccCChHHHHHHH
Confidence            999999999887    899999999776544333221   13566889999999999999999997 5999999999999


Q ss_pred             cCCcEEEeCCCCcccceeecCCceeEe--------------------CCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHH
Q 011355          391 SGKPLMATRLASIVGSVIVGTDMGYLF--------------------SPQVESVKKALYGIWADG-REVLEKKGLVARKR  449 (488)
Q Consensus       391 ~G~PVI~~~~~~~~~e~v~~~~~g~l~--------------------~~d~~~la~~i~~ll~~~-~~~~~~~~~~a~~~  449 (488)
                      ||+|||+|+.||.+ |++.++.+|+++                    ++|.+++++++.+++.++ ++.++++..++...
T Consensus       232 ~G~PVIas~~gg~~-E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~  310 (331)
T PHA01630        232 LGLDVVVTEKGAWS-EWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAIL  310 (331)
T ss_pred             cCCCEEEeCCCCch-hhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            99999999999988 888888776665                    447889999999999872 25555555555665


Q ss_pred             HhhhCCHHHHHHHHHHHHHH
Q 011355          450 GLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       450 ~~~~fs~~~~~~~~~~~~~~  469 (488)
                      +.++|||++++++++++|++
T Consensus       311 ~~~~fs~~~ia~k~~~l~~~  330 (331)
T PHA01630        311 YRENYSYNAIAKMWEKILEK  330 (331)
T ss_pred             HHHhCCHHHHHHHHHHHHhc
Confidence            66889999999999999965

>PLN02275 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.6e-32  Score=265.85  Aligned_cols=311  Identities=16%  Similarity=0.171  Sum_probs=210.0

Q ss_pred             CCcHHHHHHHHHHHHHHCCC-eEEEEecCCCCCCCCCCCCceEEEecCC-C-CccCcchhHH----------HHHHHHHH
Q 011355           92 AGGLERHALTLHLALAKRGH-ELHIFTASCLNCSFPTYPISSLYFHLSK-P-TAAGYLDQSI----------VWQQLQTQ  158 (488)
Q Consensus        92 ~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~~~~~~i~~~~~~-~-~~~~~~~~~~----------~~~~~~~~  158 (488)
                      ..|.+..+..++..|.++|+ +|++++..............++.++... + ..........          .+..+...
T Consensus        14 ~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (371)
T PLN02275         14 DFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQPRLLQRLPRVLYALALLLKVAIQFLMLLWF   93 (371)
T ss_pred             CCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCCcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence            36667777788899988875 8999998664433233334344444432 1 1101111111          11111111


Q ss_pred             h-cCCCCCcEEEeCCcch-----HHh-h--hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHh
Q 011355          159 N-STGKPFDVIHTESVGL-----RHT-R--ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEV  229 (488)
Q Consensus       159 ~-~~~~~~Dvv~~~~~~~-----~~~-~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      . .+..+||+||+|+...     ... .  ..+.| ++.++|+.+......       ..........+...+.+     
T Consensus        94 ~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~-------~~~~~~~~~~~~~~~e~-----  160 (371)
T PLN02275         94 LCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAK-FVIDWHNFGYTLLAL-------SLGRSHPLVRLYRWYER-----  160 (371)
T ss_pred             HHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCC-EEEEcCCccHHHHhc-------ccCCCCHHHHHHHHHHH-----
Confidence            1 1122899999986331     111 1  23456 889999864211100       00111111233333333     


Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChH
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHP  309 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~  309 (488)
                      ..++++|.++++|+.+++.+.+.+|++   +.+|+|+. .+.|.+....     .  .+..+++.+++++||+.+.||++
T Consensus       161 ~~~~~ad~ii~~S~~~~~~l~~~~g~~---i~vi~n~~-~~~f~~~~~~-----~--~~~~~~~~~i~~~grl~~~k~~~  229 (371)
T PLN02275        161 HYGKMADGHLCVTKAMQHELDQNWGIR---ATVLYDQP-PEFFRPASLE-----I--RLRPNRPALVVSSTSWTPDEDFG  229 (371)
T ss_pred             HHHhhCCEEEECCHHHHHHHHHhcCCC---eEEECCCC-HHHcCcCCch-----h--cccCCCcEEEEEeCceeccCCHH
Confidence            457889999999999999998866764   88999985 3445443211     1  11223336778999999999999


Q ss_pred             HHHHHHHHhHh-----------------hccCCCCCeEEEEEeCCCchhHHhhh----C-CcEEEeC-ccCHHHHHHHHH
Q 011355          310 LMFEALKQLLA-----------------ENDTFRRSTVFLVAGDGPWGARYRDL----G-TNVIVLG-PLDQTRLAMFYN  366 (488)
Q Consensus       310 ~ll~a~~~l~~-----------------~~~~~~~~~~l~ivG~g~~~~~~~~l----~-~~V~~~g-~v~~~~l~~~~~  366 (488)
                      .+++|+..+..                 +.    |+++|+|+|+|+..+++++.    + ++|.|.+ +++.+++..+|+
T Consensus       230 ~li~a~~~l~~~~~~~~~~~~~~~~~~~~~----~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~  305 (371)
T PLN02275        230 ILLEAAVMYDRRVAARLNESDSASGKQSLY----PRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLG  305 (371)
T ss_pred             HHHHHHHHHHhhhhhccccccccccccccC----CCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHH
Confidence            99999988742                 34    78999999999988776642    2 4588766 699999999999


Q ss_pred             hcCEEEeCC--CCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHH
Q 011355          367 AIDIFVNPT--LRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIW  432 (488)
Q Consensus       367 ~adv~v~ps--~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll  432 (488)
                      .||++|.|+  ...||+|++++||||||+|||+++.|+.+ |++.++.+|++++ |+++++++|.+++
T Consensus       306 ~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~-eiv~~g~~G~lv~-~~~~la~~i~~l~  371 (371)
T PLN02275        306 SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG-ELVKDGKNGLLFS-SSSELADQLLELL  371 (371)
T ss_pred             hCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH-HHccCCCCeEEEC-CHHHHHHHHHHhC
Confidence            999999763  33589999999999999999999999988 9999999999998 8999999998864

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=100.00  E-value=1.9e-32  Score=271.22  Aligned_cols=216  Identities=16%  Similarity=0.237  Sum_probs=182.1

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhc---CCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecccc
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYM---IPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK  306 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g---~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~K  306 (488)
                      ...+.+|.+|++|+..++.+.+.++   .+..++.++|||++...+.+..             ..++..++++||+.+.|
T Consensus       266 ~~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~-------------~r~~~~il~vGrl~~~K  332 (500)
T TIGR02918       266 SNADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ-------------ERKPFSIITASRLAKEK  332 (500)
T ss_pred             hchhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCccc-------------ccCCeEEEEEecccccc
Confidence            3457899999999998888877553   3467899999998654432211             12236889999999999


Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCC
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQG  380 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg  380 (488)
                      |++.+++|+..+.++.    |+++|+|+|+|+..+.+++      +.++|.|+|+.   ++.++|+.||++|+||. .||
T Consensus       333 g~~~li~A~~~l~~~~----p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~-~Eg  404 (500)
T TIGR02918       333 HIDWLVKAVVKAKKSV----PELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSAST-SEG  404 (500)
T ss_pred             CHHHHHHHHHHHHhhC----CCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCc-ccc
Confidence            9999999999999888    9999999999988766654      34789999974   57889999999999997 599


Q ss_pred             CChHHHHHHHcCCcEEEeCCC-CcccceeecCCceeEeCC-----C----HHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011355          381 LDHTVLEAMLSGKPLMATRLA-SIVGSVIVGTDMGYLFSP-----Q----VESVKKALYGIWADGREVLEKKGLVARKRG  450 (488)
Q Consensus       381 ~~~~~lEAma~G~PVI~~~~~-~~~~e~v~~~~~g~l~~~-----d----~~~la~~i~~ll~~~~~~~~~~~~~a~~~~  450 (488)
                      ||++++||||||+|||+++++ |.+ |++.++.+|+++++     |    +++++++|.++++  ++.+.+|+++|++.+
T Consensus       405 fgl~~lEAma~G~PVI~~dv~~G~~-eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~~~~~~~a~~~a  481 (500)
T TIGR02918       405 FGLTLMEAVGSGLGMIGFDVNYGNP-TFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDIDAFHEYSYQIA  481 (500)
T ss_pred             ccHHHHHHHHhCCCEEEecCCCCCH-HHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHH
Confidence            999999999999999999987 676 89999999999983     2    8899999999994  457899999999987


Q ss_pred             hhhCCHHHHHHHHHHHHHHh
Q 011355          451 LNLFTATKMAAAYERLFLCI  470 (488)
Q Consensus       451 ~~~fs~~~~~~~~~~~~~~~  470 (488)
                      + .|||+.+++++.++++++
T Consensus       482 ~-~fs~~~v~~~w~~ll~~~  500 (500)
T TIGR02918       482 E-GFLTANIIEKWKKLVREV  500 (500)
T ss_pred             H-hcCHHHHHHHHHHHHhhC
Confidence            4 599999999999998764

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=100.00  E-value=2.4e-32  Score=270.19  Aligned_cols=387  Identities=17%  Similarity=0.144  Sum_probs=254.5

Q ss_pred             hhhHHHHHHHHHHHhHHHHHhhcCCCCCcccCCcccccccccccccccccccccccCCCCCCCCceEEEEEecCCCCCCC
Q 011355           12 RSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRSH   91 (488)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIl~i~~~~p~~~~   91 (488)
                      ..+|.+++.+++|++..++++|+.+...+   +.++.               +++++.......+-+.++++.      .
T Consensus         3 ~~~y~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~---------------~r~~~~~~~~~~~~~~iW~Ha------~   58 (425)
T PRK05749          3 RLLYTALLYLALPLILLRLLLRSRKAPKY---RKRWG---------------ERFGFRKPNPPPKGPLIWFHA------V   58 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCccc---hhhhc---------------cccCCCCCCCCCCCCeEEEEe------C
Confidence            45899999999999999988886544444   44455               555542111112234578886      6


Q ss_pred             CCcHHHHHHHHHHHHHHCCCe--EEEEecCCCCCCCCC-CCCceEEEecCCCCccCcchhHHHHHHHHHHhcCCCCCcEE
Q 011355           92 AGGLERHALTLHLALAKRGHE--LHIFTASCLNCSFPT-YPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVI  168 (488)
Q Consensus        92 ~gG~~~~~~~l~~~L~~~G~~--V~v~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv  168 (488)
                      +.|....+..|++.|.+++++  |.+.+.+.++..... ...+.+.+... |     .+.......+.+..    +||++
T Consensus        59 s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~-P-----~d~~~~~~~~l~~~----~Pd~v  128 (425)
T PRK05749         59 SVGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYL-P-----YDLPGAVRRFLRFW----RPKLV  128 (425)
T ss_pred             CHHHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEe-c-----CCcHHHHHHHHHhh----CCCEE
Confidence            678889999999999988655  444443332222111 11111222111 1     23334455555444    89999


Q ss_pred             EeCCcchH-----HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcCh
Q 011355          169 HTESVGLR-----HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSD  243 (488)
Q Consensus       169 ~~~~~~~~-----~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~  243 (488)
                      +++...++     .....++| ++...|.......                  ..+....+...  ..++.+|.++++|+
T Consensus       129 ~~~~~~~~~~~l~~~~~~~ip-~vl~~~~~~~~s~------------------~~~~~~~~~~r--~~~~~~d~ii~~S~  187 (425)
T PRK05749        129 IIMETELWPNLIAELKRRGIP-LVLANARLSERSF------------------KRYQKFKRFYR--LLFKNIDLVLAQSE  187 (425)
T ss_pred             EEEecchhHHHHHHHHHCCCC-EEEEeccCChhhH------------------HHHHHHHHHHH--HHHHhCCEEEECCH
Confidence            98753322     22334567 6655444311110                  00011111111  35678999999999


Q ss_pred             hhHHHHHHHhcCCCCcEEEecCC-ccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhc
Q 011355          244 HCGDVLKRIYMIPEERVHVILNG-VDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAEN  322 (488)
Q Consensus       244 ~~~~~~~~~~g~~~~~i~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~  322 (488)
                      ..++.+.+ +|++.+ +.+++|+ +|.............++++++ + ++ .+++++|+.  .|+.+.+++|++++.++.
T Consensus       188 ~~~~~l~~-~g~~~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~-~-~~-~vil~~~~~--~~~~~~ll~A~~~l~~~~  260 (425)
T PRK05749        188 EDAERFLA-LGAKNE-VTVTGNLKFDIEVPPELAARAATLRRQLA-P-NR-PVWIAASTH--EGEEELVLDAHRALLKQF  260 (425)
T ss_pred             HHHHHHHH-cCCCCC-cEecccccccCCCChhhHHHHHHHHHHhc-C-CC-cEEEEeCCC--chHHHHHHHHHHHHHHhC
Confidence            99999998 788777 8899984 443322222223356777776 3 44 566777764  677899999999998888


Q ss_pred             cCCCCCeEEEEEeCCCch-hHHhhh----C---------------CcEEEeCccCHHHHHHHHHhcCEE-EeCCCCCCCC
Q 011355          323 DTFRRSTVFLVAGDGPWG-ARYRDL----G---------------TNVIVLGPLDQTRLAMFYNAIDIF-VNPTLRAQGL  381 (488)
Q Consensus       323 ~~~~~~~~l~ivG~g~~~-~~~~~l----~---------------~~V~~~g~v~~~~l~~~~~~adv~-v~ps~~~eg~  381 (488)
                          |+++|+|+|+|+.+ +.+++.    +               .+|.+.+.  .+++..+|+.||++ +.+|. .|++
T Consensus       261 ----~~~~liivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~--~~el~~~y~~aDi~~v~~S~-~e~~  333 (425)
T PRK05749        261 ----PNLLLILVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDT--MGELGLLYAIADIAFVGGSL-VKRG  333 (425)
T ss_pred             ----CCcEEEEcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEec--HHHHHHHHHhCCEEEECCCc-CCCC
Confidence                89999999999875 444432    1               13455554  56999999999995 45676 4889


Q ss_pred             ChHHHHHHHcCCcEEEeCC-CCcccceeecC-CceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHH
Q 011355          382 DHTVLEAMLSGKPLMATRL-ASIVGSVIVGT-DMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATK  458 (488)
Q Consensus       382 ~~~~lEAma~G~PVI~~~~-~~~~~e~v~~~-~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~  458 (488)
                      |++++|||+||+|||+++. ++.. ++.... ++|.++++ |+++++++|.++++| ++.+++|++++++++.++   ..
T Consensus       334 g~~~lEAma~G~PVI~g~~~~~~~-e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~-~~~~~~m~~~a~~~~~~~---~~  408 (425)
T PRK05749        334 GHNPLEPAAFGVPVISGPHTFNFK-EIFERLLQAGAAIQVEDAEDLAKAVTYLLTD-PDARQAYGEAGVAFLKQN---QG  408 (425)
T ss_pred             CCCHHHHHHhCCCEEECCCccCHH-HHHHHHHHCCCeEEECCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhC---cc
Confidence            9999999999999999865 3333 444332 45777777 999999999999998 999999999999999775   36


Q ss_pred             HHHHHHHHHHHhhc
Q 011355          459 MAAAYERLFLCISN  472 (488)
Q Consensus       459 ~~~~~~~~~~~~~~  472 (488)
                      ..+++.+++.+.+.
T Consensus       409 ~~~~~~~~l~~~l~  422 (425)
T PRK05749        409 ALQRTLQLLEPYLP  422 (425)
T ss_pred             HHHHHHHHHHHhcc
Confidence            66777777776554

>PLN02501 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=7e-32  Score=262.94  Aligned_cols=347  Identities=14%  Similarity=0.062  Sum_probs=226.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCC--------------------------CC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCSFPT--------------------------YP  129 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~--------------------------~~  129 (488)
                      -+|+|++..-.|  -..|...--+--+-+|++. |++|+++.+--.......                          .-
T Consensus       323 r~~~ivTtAslP--WmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~  400 (794)
T PLN02501        323 RHVAIVTTASLP--WMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGF  400 (794)
T ss_pred             CeEEEEEcccCc--ccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCC
Confidence            479999876555  3455544444456677777 799999987543221111                          00


Q ss_pred             CceEEEecCCCCccCcchhHHHHHHHHHHhcCCCCCcEEEeCCcchHHhh-------hccCCcEEEeeeCCcchhhhhhh
Q 011355          130 ISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTR-------ARNLTNVVVSWHGIAYETIHSDI  202 (488)
Q Consensus       130 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~-------~~~~p~~v~~~h~~~~~~~~~~~  202 (488)
                      .....+.++.........-......+....... +|||||++++....+.       .+.-| ++..+|.....+..   
T Consensus       401 ~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f-~PDVVHLatP~~LGw~~~Glr~ArKl~P-VVasyHTny~eYl~---  475 (794)
T PLN02501        401 KADFKISFYPGKFSKERRSIIPAGDTSQFIPSK-DADIAILEEPEHLNWYHHGKRWTDKFNH-VVGVVHTNYLEYIK---  475 (794)
T ss_pred             CCCceEEeecchhccCCccccchHHHHHHhhcc-CCCEEEECCchhhccHHHHHHHHHHcCC-eEEEEeCCcHHHHh---
Confidence            011111111100000001111122233333333 8999999986543333       22236 88899975432211   


Q ss_pred             hHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhh
Q 011355          203 IQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDF  282 (488)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~  282 (488)
                           .+........+.+.+.++...  ++  ||.++++|+.+.+ +      +...+..+ ||||.+.|.+....  ..
T Consensus       476 -----~y~~g~L~~~llk~l~~~v~r--~h--cD~VIaPS~atq~-L------~~~vI~nV-nGVDte~F~P~~r~--~~  536 (794)
T PLN02501        476 -----REKNGALQAFFVKHINNWVTR--AY--CHKVLRLSAATQD-L------PKSVICNV-HGVNPKFLKIGEKV--AE  536 (794)
T ss_pred             -----HhcchhHHHHHHHHHHHHHHH--hh--CCEEEcCCHHHHH-h------cccceeec-ccccccccCCcchh--HH
Confidence                 111112222233333333321  22  8999999977663 2      12222222 79999998876442  22


Q ss_pred             hhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh----hCCcEEEeCccCH
Q 011355          283 KKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD----LGTNVIVLGPLDQ  358 (488)
Q Consensus       283 r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~----l~~~V~~~g~v~~  358 (488)
                      +++++++... ..++|+||+.++||++.+++|++.+.++.    ++++|+|+|+|+..+.+++    ++-+|.|+|..+ 
T Consensus       537 ~r~lgi~~~~-kgiLfVGRLa~EKGld~LLeAla~L~~~~----pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~d-  610 (794)
T PLN02501        537 ERELGQQAFS-KGAYFLGKMVWAKGYRELIDLLAKHKNEL----DGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRD-  610 (794)
T ss_pred             HHhcCCcccc-CceEEEEcccccCCHHHHHHHHHHHHhhC----CCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCC-
Confidence            3566665433 34679999999999999999999998877    8999999999999877765    334589999854 


Q ss_pred             HHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHH
Q 011355          359 TRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREV  438 (488)
Q Consensus       359 ~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~  438 (488)
                       +..++|+.+|+||+||. .||||++++||||||+|||+++.++.  +.+.++.+|++.. |.++++++|.+++.+ ++.
T Consensus       611 -d~~~lyasaDVFVlPS~-sEgFGlVlLEAMA~GlPVVATd~pG~--e~V~~g~nGll~~-D~EafAeAI~~LLsd-~~~  684 (794)
T PLN02501        611 -HADDSLHGYKVFINPSI-SDVLCTATAEALAMGKFVVCADHPSN--EFFRSFPNCLTYK-TSEDFVAKVKEALAN-EPQ  684 (794)
T ss_pred             -CHHHHHHhCCEEEECCC-cccchHHHHHHHHcCCCEEEecCCCC--ceEeecCCeEecC-CHHHHHHHHHHHHhC-chh
Confidence             67799999999999997 59999999999999999999999984  4577788888765 999999999999998 443


Q ss_pred             HHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          439 LEKKGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       439 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                      ...+++      ...|||+.+++++.+.-
T Consensus       685 rl~~~a------~~~~SWeAaadrLle~~  707 (794)
T PLN02501        685 PLTPEQ------RYNLSWEAATQRFMEYS  707 (794)
T ss_pred             hhHHHH------HhhCCHHHHHHHHHHhh
Confidence            333321      23689999999998764

>PHA01633 putative glycosyl transferase group 1

Probab=100.00  E-value=4.3e-32  Score=251.96  Aligned_cols=311  Identities=14%  Similarity=0.241  Sum_probs=219.0

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      ||-++++..|      +.+.....++++.|++.|.-|++++....-+..   ....+.+++..|   ....+...     
T Consensus         1 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~-----   63 (335)
T PHA01633          1 MKTAILTMNY------SSISNVSEDIAEVLRENGEIVTITKNPFYIPKA---EKLIVFIPFHPP---SLNPYLYA-----   63 (335)
T ss_pred             CceEEEEech------hhhhhHHHHHHHHHHhCCcEEEEecCCcccCcc---ceEEEEeecCCc---ccchHHhh-----
Confidence            6778888754      455667788999999999888888765422211   111122222222   11111111     


Q ss_pred             HHhcCCCCCcEEEeCCcchHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCcc
Q 011355          157 TQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYA  236 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (488)
                                         ..++....+ .+.++|+....                    .++   .      +.+.+.+
T Consensus        64 -------------------~~~~~~~~~-~~tt~~g~~~~--------------------~~y---~------~~m~~~~   94 (335)
T PHA01633         64 -------------------YYQFKGKKY-FYTTCDGIPNI--------------------EIV---N------KYLLQDV   94 (335)
T ss_pred             -------------------hhhhcCCCc-eEEeeCCcCch--------------------HHH---H------HHHhcCC
Confidence                               122222335 88999986321                    111   1      2233456


Q ss_pred             EEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHH
Q 011355          237 HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK  316 (488)
Q Consensus       237 ~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~  316 (488)
                      .+|++|+.+++.+.+ .|++.. + +|++|+|.+.|.+.......+|++++....+.++++++||+.++||++.+++|++
T Consensus        95 ~vIavS~~t~~~L~~-~G~~~~-i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~  171 (335)
T PHA01633         95 KFIPNSKFSAENLQE-VGLQVD-L-PVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFN  171 (335)
T ss_pred             EEEeCCHHHHHHHHH-hCCCCc-e-eeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHH
Confidence            889999999999998 687654 3 5789999998877554445677777754233478999999999999999999999


Q ss_pred             HhHhhccCCCCCeEEEEEeCCCchhHHh--hhCCcEEEe---CccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHc
Q 011355          317 QLLAENDTFRRSTVFLVAGDGPWGARYR--DLGTNVIVL---GPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLS  391 (488)
Q Consensus       317 ~l~~~~~~~~~~~~l~ivG~g~~~~~~~--~l~~~V~~~---g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~  391 (488)
                      .+.++.++...+++++++|.+    .++  .+.++|+|.   |+++.+++.++|++||++|+||. .||||++++|||+|
T Consensus       172 ~L~~~~p~~~~~i~l~ivG~~----~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~-~EgfGlvlLEAMA~  246 (335)
T PHA01633        172 ELNTKYPDIAKKIHFFVISHK----QFTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSG-TEGFGMPVLESMAM  246 (335)
T ss_pred             HHHHhCCCccccEEEEEEcHH----HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCc-cccCCHHHHHHHHc
Confidence            998877111114688888843    223  255789998   56678999999999999999997 59999999999999


Q ss_pred             CCcEEEeCCCCcccceee------------------cCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 011355          392 GKPLMATRLASIVGSVIV------------------GTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLN  452 (488)
Q Consensus       392 G~PVI~~~~~~~~~e~v~------------------~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~  452 (488)
                      |+|||+++.++++ |++.                  +...|+.+++ |+++++++|..++.. . ....++.++++.+++
T Consensus       247 G~PVVas~~~~l~-Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~-~-~~~~~~~~~~~~a~~  323 (335)
T PHA01633        247 GTPVIHQLMPPLD-EFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL-Q-DREERSMKLKELAKK  323 (335)
T ss_pred             CCCEEEccCCCce-eecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc-c-ChhhhhHHHHHHHHh
Confidence            9999999999987 6432                  1235778888 999999999999665 2 233446788888755


Q ss_pred             hCCHHHHHHHHHH
Q 011355          453 LFTATKMAAAYER  465 (488)
Q Consensus       453 ~fs~~~~~~~~~~  465 (488)
                       |+|++++++|++
T Consensus       324 -f~~~~~~~~~~~  335 (335)
T PHA01633        324 -YDIRNLYTRFLE  335 (335)
T ss_pred             -cCHHHHHHHhhC
Confidence             999999998863

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=99.97  E-value=4.9e-30  Score=250.15  Aligned_cols=211  Identities=15%  Similarity=0.234  Sum_probs=182.1

Q ss_pred             hcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHH
Q 011355          231 FFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPL  310 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~  310 (488)
                      .++++|.+++.|+..++.+.+.++.. .++.+||||++...+.+...          .+..+ ..++++||+.+.||++.
T Consensus       154 ~~~~~d~ii~~s~~~~~~l~~~~~~~-~~v~~ip~g~~~~~~~~~~~----------~~~~~-~~i~~vgrl~~~K~~~~  221 (372)
T cd04949         154 NLDKVDGVIVATEQQKQDLQKQFGNY-NPIYTIPVGSIDPLKLPAQF----------KQRKP-HKIITVARLAPEKQLDQ  221 (372)
T ss_pred             ChhhCCEEEEccHHHHHHHHHHhCCC-CceEEEcccccChhhcccch----------hhcCC-CeEEEEEccCcccCHHH
Confidence            35789999999999999999877643 45999999999876654310          01222 67889999999999999


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      +++++.++.++.    |+++|+|+|.|+....+++      +.++|.+.|+  .+++..+|+.||++|+||. .||||++
T Consensus       222 li~a~~~l~~~~----~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~v~~S~-~Eg~~~~  294 (372)
T cd04949         222 LIKAFAKVVKQV----PDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGY--TRDLDEVYQKAQLSLLTSQ-SEGFGLS  294 (372)
T ss_pred             HHHHHHHHHHhC----CCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCC--CCCHHHHHhhhhEEEeccc-ccccChH
Confidence            999999999988    9999999999887655443      3578999997  5589999999999999997 5999999


Q ss_pred             HHHHHHcCCcEEEeCCC-CcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHH
Q 011355          385 VLEAMLSGKPLMATRLA-SIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAA  462 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~~-~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~  462 (488)
                      ++|||++|+|||+++.+ |.. +++.++.+|+++++ |+++++++|..++++ ++.+.+|++++++.+ ++|||++++++
T Consensus       295 ~lEAma~G~PvI~~~~~~g~~-~~v~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~-~~~s~~~~~~~  371 (372)
T cd04949         295 LMEALSHGLPVISYDVNYGPS-EIIEDGENGYLVPKGDIEALAEAIIELLND-PKLLQKFSEAAYENA-ERYSEENVWEK  371 (372)
T ss_pred             HHHHHhCCCCEEEecCCCCcH-HHcccCCCceEeCCCcHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH-HHhhHHHHHhc
Confidence            99999999999999987 665 89999999999999 999999999999999 899999999999995 66999999876


Q ss_pred             H
Q 011355          463 Y  463 (488)
Q Consensus       463 ~  463 (488)
                      |
T Consensus       372 w  372 (372)
T cd04949         372 W  372 (372)
T ss_pred             C
Confidence            4

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.97  E-value=6.9e-28  Score=233.25  Aligned_cols=328  Identities=20%  Similarity=0.117  Sum_probs=223.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC--CCCCceEEEecCCCCccC-------cch
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFP--TYPISSLYFHLSKPTAAG-------YLD  147 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~-------~~~  147 (488)
                      |||++++.      ..||.++.+.+++++|.++||+|++++.........  ..+.+...+.........       ...
T Consensus         2 ~~i~i~~~------g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~   75 (357)
T PRK00726          2 KKILLAGG------GTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAGIEFHFIPSGGLRRKGSLANLKAPFK   75 (357)
T ss_pred             cEEEEEcC------cchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCCCcEEEEeccCcCCCChHHHHHHHHH
Confidence            89999985      568999999999999999999999999865321111  123333333321110011       112


Q ss_pred             hHHHHHHHHHHhcCCCCCcEEEeCCc--chHH---hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          148 QSIVWQQLQTQNSTGKPFDVIHTESV--GLRH---TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Dvv~~~~~--~~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ....+..+.+..++. +||+||+|+.  .+..   ....+.| ++...|+..               +     .    ..
T Consensus        76 ~~~~~~~~~~~ik~~-~pDvv~~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~---------------~-----~----~~  129 (357)
T PRK00726         76 LLKGVLQARKILKRF-KPDVVVGFGGYVSGPGGLAARLLGIP-LVIHEQNAV---------------P-----G----LA  129 (357)
T ss_pred             HHHHHHHHHHHHHhc-CCCEEEECCCcchhHHHHHHHHcCCC-EEEEcCCCC---------------c-----c----HH
Confidence            233334444444444 8999999973  2222   2223456 665544321               0     0    01


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      .+     ..++.+|.+++.++...   .+   .+..++++++||+|.+.+....     .+++++++++. .+++++|+.
T Consensus       130 ~r-----~~~~~~d~ii~~~~~~~---~~---~~~~~i~vi~n~v~~~~~~~~~-----~~~~~~~~~~~-~~i~~~gg~  192 (357)
T PRK00726        130 NK-----LLARFAKKVATAFPGAF---PE---FFKPKAVVTGNPVREEILALAA-----PPARLAGREGK-PTLLVVGGS  192 (357)
T ss_pred             HH-----HHHHHhchheECchhhh---hc---cCCCCEEEECCCCChHhhcccc-----hhhhccCCCCC-eEEEEECCc
Confidence            11     22346788888887432   22   5678999999999987654321     23455666555 677788888


Q ss_pred             ccccChHHHH-HHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh--hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCC
Q 011355          303 VKDKGHPLMF-EALKQLLAENDTFRRSTVFLVAGDGPWGARYRD--LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ  379 (488)
Q Consensus       303 ~~~Kg~~~ll-~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~--l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~e  379 (488)
                      ...|++..++ +|+.++.+ .    + ..++++|+|+.++..+.  ++-+|.+.|++  +++.++|+.||++|.++    
T Consensus       193 ~~~~~~~~~l~~a~~~~~~-~----~-~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~~~----  260 (357)
T PRK00726        193 QGARVLNEAVPEALALLPE-A----L-QVIHQTGKGDLEEVRAAYAAGINAEVVPFI--DDMAAAYAAADLVICRA----  260 (357)
T ss_pred             HhHHHHHHHHHHHHHHhhh-C----c-EEEEEcCCCcHHHHHHHhhcCCcEEEeehH--hhHHHHHHhCCEEEECC----
Confidence            8888776555 88888753 2    3 56788999876544333  23349999996  69999999999999855    


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCCcc-------cceeecCCceeEeCC-C--HHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLASIV-------GSVIVGTDMGYLFSP-Q--VESVKKALYGIWADGREVLEKKGLVARKR  449 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~~~-------~e~v~~~~~g~l~~~-d--~~~la~~i~~ll~~~~~~~~~~~~~a~~~  449 (488)
                      | +.+++|||++|+|||++..++..       .+.+.+.++|+++++ |  +++++++|.+++++ ++.+++|+++++++
T Consensus       261 g-~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~  338 (357)
T PRK00726        261 G-ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMAEAARAL  338 (357)
T ss_pred             C-HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhc
Confidence            2 58999999999999998765322       145777889999987 6  99999999999999 99999999999999


Q ss_pred             HhhhCCHHHHHHHHHHHHH
Q 011355          450 GLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       450 ~~~~fs~~~~~~~~~~~~~  468 (488)
                      +. .++.+.+++.+.++..
T Consensus       339 ~~-~~~~~~~~~~~~~~~~  356 (357)
T PRK00726        339 GK-PDAAERLADLIEELAR  356 (357)
T ss_pred             CC-cCHHHHHHHHHHHHhh
Confidence            74 4899999988887653

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.96  E-value=3.6e-26  Score=220.59  Aligned_cols=385  Identities=21%  Similarity=0.239  Sum_probs=261.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-------------------------CC--
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-------------------------YP--  129 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-------------------------~~--  129 (488)
                      |||++++...-|-...||....+..+.++|++.|++|.|+.+.........                         ..  
T Consensus         1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (487)
T COG0297           1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD   80 (487)
T ss_pred             CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence            899999987766678999999999999999999999999998765221111                         00  


Q ss_pred             C-ceEEEecCCCCcc--------CcchhHHHHHHHH----HHhcCC---CCCcEEEeCCcc---hHHhhhc------cCC
Q 011355          130 I-SSLYFHLSKPTAA--------GYLDQSIVWQQLQ----TQNSTG---KPFDVIHTESVG---LRHTRAR------NLT  184 (488)
Q Consensus       130 ~-~~i~~~~~~~~~~--------~~~~~~~~~~~~~----~~~~~~---~~~Dvv~~~~~~---~~~~~~~------~~p  184 (488)
                      . ....+.. .+...        +..+....+..+.    ......   ..|||||+|+..   ++.+++.      .+|
T Consensus        81 ~~v~~~lid-~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~  159 (487)
T COG0297          81 GGVDLYLID-NPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIP  159 (487)
T ss_pred             CCCcEEEec-ChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCC
Confidence            0 0111110 11111        1111111111111    111111   269999999842   3444443      346


Q ss_pred             cEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHH-HHhc--------C
Q 011355          185 NVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLK-RIYM--------I  255 (488)
Q Consensus       185 ~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~-~~~g--------~  255 (488)
                       .+.++|...+.........+...-|.....................+..+|.+.++|...++.+. ..+|        .
T Consensus       160 -tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~  238 (487)
T COG0297         160 -TVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSW  238 (487)
T ss_pred             -eEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhh
Confidence             99999998876555522222223332111100000001111111345789999999998888776 1121        2


Q ss_pred             CCCcEEEecCCccCCCcCCCcc-----------------cchhhhhhhCCCCC-CcEEEEEEeeeccccChHHHHHHHHH
Q 011355          256 PEERVHVILNGVDEEVFKPDVA-----------------MGKDFKKKFGIPEN-RSLVLGMAGRLVKDKGHPLMFEALKQ  317 (488)
Q Consensus       256 ~~~~i~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~-~~~~i~~~Grl~~~Kg~~~ll~a~~~  317 (488)
                      ...+++-|-||+|.+...+...                 .+..+.+++|++.+ +.+.++++||+..+||++.+++++..
T Consensus       239 ~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~  318 (487)
T COG0297         239 RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDE  318 (487)
T ss_pred             ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHH
Confidence            3467889999999886654322                 23567888999854 33899999999999999999999999


Q ss_pred             hHhhccCCCCCeEEEEEeCCC--chhHHhh----hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHc
Q 011355          318 LLAENDTFRRSTVFLVAGDGP--WGARYRD----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLS  391 (488)
Q Consensus       318 l~~~~~~~~~~~~l~ivG~g~--~~~~~~~----l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~  391 (488)
                      +.++      ..++++.|.|+  +++.+..    ...++.+.-..+..-...+|+.+|++++||. .|++|++-++||..
T Consensus       319 ~l~~------~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPSr-fEPcGL~ql~amry  391 (487)
T COG0297         319 LLEQ------GWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSR-FEPCGLTQLYAMRY  391 (487)
T ss_pred             HHHh------CceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCCc-CcCCcHHHHHHHHc
Confidence            9884      48999999983  1222332    2355666666677777899999999999997 59999999999999


Q ss_pred             CCcEEEeCCCCcccceeec--------CCceeEeCC-CHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHhhhCCHHHH
Q 011355          392 GKPLMATRLASIVGSVIVG--------TDMGYLFSP-QVESVKKALYGIWA---DGREVLEKKGLVARKRGLNLFTATKM  459 (488)
Q Consensus       392 G~PVI~~~~~~~~~e~v~~--------~~~g~l~~~-d~~~la~~i~~ll~---~~~~~~~~~~~~a~~~~~~~fs~~~~  459 (488)
                      |+++|+..+||.. +.|.+        ..+|+++.+ |.++++.+|.+.+.   +++..++.+..++..   ..|+|++.
T Consensus       392 GtvpIv~~tGGLa-dTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~s  467 (487)
T COG0297         392 GTLPIVRETGGLA-DTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLS  467 (487)
T ss_pred             CCcceEcccCCcc-ceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhH
Confidence            9999999999999 55553        589999999 99999999987765   323336666666655   56999999


Q ss_pred             HHHHHHHHHHhhccc
Q 011355          460 AAAYERLFLCISNDE  474 (488)
Q Consensus       460 ~~~~~~~~~~~~~~~  474 (488)
                      +++|.++|+.+.+..
T Consensus       468 a~~y~~lY~~~~~~~  482 (487)
T COG0297         468 AKEYVELYKPLLSKP  482 (487)
T ss_pred             HHHHHHHHHHHhccc
Confidence            999999999998743

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=2.1e-27  Score=218.45  Aligned_cols=383  Identities=17%  Similarity=0.163  Sum_probs=279.4

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHhhcCCCCCcccCCcccccccccccccccccccccccCCCCCCCCceEEEEEecCCCCCC
Q 011355           11 FRSFCCVFFVLSAFSFISFLYWCHCSGPCYSQNQIMTQKQDKFIDLLWFPSAWNHLSFPSNPPLKLLKIALFVKKWPHRS   90 (488)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIl~i~~~~p~~~   90 (488)
                      ++++|++++++++|++..++++|+...+.|   ..+|.               +|++++....++.--.++++.      
T Consensus         1 ~~~lY~~l~~~~~p~~~~~l~~R~~~~~~y---~~r~~---------------eRfg~~~~~~~~~~p~vWiHa------   56 (419)
T COG1519           1 LRFLYRLLLTLALPFIAPRLLYRSFKGPKY---RKRLG---------------ERFGFYKPPVKPEGPLVWIHA------   56 (419)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhcChHH---HHHHH---------------HHhcccCCCCCCCCCeEEEEe------
Confidence            467999999999999999999999999999   99999               999976444444335688876      


Q ss_pred             CCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHHHhcCCCCCcEE
Q 011355           91 HAGGLERHALTLHLALAKR--GHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVI  168 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv  168 (488)
                      .+-|....+..|+++|.++  ++.+.+.|.++++.+......+....+...|     .+.....+++....    +||++
T Consensus        57 aSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP-----~D~~~~v~rFl~~~----~P~l~  127 (419)
T COG1519          57 ASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLP-----LDLPIAVRRFLRKW----RPKLL  127 (419)
T ss_pred             cchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecC-----cCchHHHHHHHHhc----CCCEE
Confidence            6789899999999999998  7888888877766544332222222333323     56666777777776    99999


Q ss_pred             EeCCcchH-----HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcCh
Q 011355          169 HTESVGLR-----HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSD  243 (488)
Q Consensus       169 ~~~~~~~~-----~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~  243 (488)
                      ++....+|     ....+++| ++..--.+                  +-.+..-+.+...+.+  ..+++.|.|+++|+
T Consensus       128 Ii~EtElWPnli~e~~~~~~p-~~LvNaRL------------------S~rS~~~y~k~~~~~~--~~~~~i~li~aQse  186 (419)
T COG1519         128 IIMETELWPNLINELKRRGIP-LVLVNARL------------------SDRSFARYAKLKFLAR--LLFKNIDLILAQSE  186 (419)
T ss_pred             EEEeccccHHHHHHHHHcCCC-EEEEeeee------------------chhhhHHHHHHHHHHH--HHHHhcceeeecCH
Confidence            88764433     33345667 44332221                  1111222333333333  45788999999999


Q ss_pred             hhHHHHHHHhcCCCCcEEEecC-CccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhc
Q 011355          244 HCGDVLKRIYMIPEERVHVILN-GVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAEN  322 (488)
Q Consensus       244 ~~~~~~~~~~g~~~~~i~vi~n-gvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~  322 (488)
                      ..++.+.+ +|.++  +.+..| .+|.+.-+........+|.+++.+  + .+++..+++..+.  +.+++++..+++++
T Consensus       187 ~D~~Rf~~-LGa~~--v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~--r-~v~iaaSTH~GEe--ei~l~~~~~l~~~~  258 (419)
T COG1519         187 EDAQRFRS-LGAKP--VVVTGNLKFDIEPPPQLAAELAALRRQLGGH--R-PVWVAASTHEGEE--EIILDAHQALKKQF  258 (419)
T ss_pred             HHHHHHHh-cCCcc--eEEecceeecCCCChhhHHHHHHHHHhcCCC--C-ceEEEecCCCchH--HHHHHHHHHHHhhC
Confidence            99999999 78754  888888 677665555555567788888754  3 5677788754444  34899999999999


Q ss_pred             cCCCCCeEEEEEeCCCchh-----HHhh---------------hCCcEEEeCccCHHHHHHHHHhcCE-EEeCCCCCCCC
Q 011355          323 DTFRRSTVFLVAGDGPWGA-----RYRD---------------LGTNVIVLGPLDQTRLAMFYNAIDI-FVNPTLRAQGL  381 (488)
Q Consensus       323 ~~~~~~~~l~ivG~g~~~~-----~~~~---------------l~~~V~~~g~v~~~~l~~~~~~adv-~v~ps~~~eg~  381 (488)
                          |+..+++|.++|++-     .+++               ...+|.+.+.+.  ||..+|..+|+ ||..|..+.| 
T Consensus       259 ----~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmG--EL~l~y~~adiAFVGGSlv~~G-  331 (419)
T COG1519         259 ----PNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMG--ELGLLYGIADIAFVGGSLVPIG-  331 (419)
T ss_pred             ----CCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHh--HHHHHHhhccEEEECCcccCCC-
Confidence                999999999998762     1221               124788888977  99999999999 7778886566 


Q ss_pred             ChHHHHHHHcCCcEEEeC----CCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHH
Q 011355          382 DHTVLEAMLSGKPLMATR----LASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTAT  457 (488)
Q Consensus       382 ~~~~lEAma~G~PVI~~~----~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~  457 (488)
                      |..++|+.++|+|||...    ...+. +.+...+.|+.++ |.+.+++++..++.+ ++.+++|++++.+.+.++   .
T Consensus       332 GHN~LEpa~~~~pvi~Gp~~~Nf~ei~-~~l~~~ga~~~v~-~~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~---~  405 (419)
T COG1519         332 GHNPLEPAAFGTPVIFGPYTFNFSDIA-ERLLQAGAGLQVE-DADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN---R  405 (419)
T ss_pred             CCChhhHHHcCCCEEeCCccccHHHHH-HHHHhcCCeEEEC-CHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh---h
Confidence            999999999999999863    34444 4556677888888 788888888888888 999999999999998764   2


Q ss_pred             HHHHHHHHHHH
Q 011355          458 KMAAAYERLFL  468 (488)
Q Consensus       458 ~~~~~~~~~~~  468 (488)
                      ...+++.+.++
T Consensus       406 gal~r~l~~l~  416 (419)
T COG1519         406 GALARTLEALK  416 (419)
T ss_pred             HHHHHHHHHhh
Confidence            34444444443

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.96  E-value=8.4e-27  Score=227.47  Aligned_cols=337  Identities=12%  Similarity=0.045  Sum_probs=223.8

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCC-----------C-ce-EEEecC-CC
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYP-----------I-SS-LYFHLS-KP  140 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~-----------~-~~-i~~~~~-~~  140 (488)
                      +.|||++++.+     ..+|....+..++++|.++|++|++++............           . +. ..+... ..
T Consensus         3 ~~~rili~t~~-----~G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~   77 (380)
T PRK13609          3 KNPKVLILTAH-----YGNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVE   77 (380)
T ss_pred             CCCeEEEEEcC-----CCchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccC
Confidence            56799999974     345899999999999999999877776554222110000           0 00 000000 00


Q ss_pred             CccCc--ch--hHHHHHHHHHHhcCCCCCcEEEeCCcch--HHhhh---ccCCcEEEeeeCCcchhhhhhhhHhhhcCCC
Q 011355          141 TAAGY--LD--QSIVWQQLQTQNSTGKPFDVIHTESVGL--RHTRA---RNLTNVVVSWHGIAYETIHSDIIQELLRTPE  211 (488)
Q Consensus       141 ~~~~~--~~--~~~~~~~~~~~~~~~~~~Dvv~~~~~~~--~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~  211 (488)
                      .....  ..  .......+.+..++. +||+||++....  +...+   .++| ++...++...              . 
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~~~~~~~~~~~~~~~~~~ip-~~~~~td~~~--------------~-  140 (380)
T PRK13609         78 KIYDKKIFSWYANFGRKRLKLLLQAE-KPDIVINTFPIIAVPELKKQTGISIP-TYNVLTDFCL--------------H-  140 (380)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHh-CcCEEEEcChHHHHHHHHHhcCCCCC-eEEEeCCCCC--------------C-
Confidence            00000  00  111123344444444 899999986432  22221   2345 5544433210              0 


Q ss_pred             ChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCC
Q 011355          212 EPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPEN  291 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~  291 (488)
                                      ..++++++|.++++|+..++.+.+ +|++++++.+++++++.......  ....++++++++++
T Consensus       141 ----------------~~~~~~~ad~i~~~s~~~~~~l~~-~gi~~~ki~v~G~p~~~~f~~~~--~~~~~~~~~~l~~~  201 (380)
T PRK13609        141 ----------------KIWVHREVDRYFVATDHVKKVLVD-IGVPPEQVVETGIPIRSSFELKI--NPDIIYNKYQLCPN  201 (380)
T ss_pred             ----------------cccccCCCCEEEECCHHHHHHHHH-cCCChhHEEEECcccChHHcCcC--CHHHHHHHcCCCCC
Confidence                            003467899999999999999988 79988999998877754332221  23457889999887


Q ss_pred             CcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEe-CC-CchhHHhh----hCCcEEEeCccCHHHHHHHH
Q 011355          292 RSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-DG-PWGARYRD----LGTNVIVLGPLDQTRLAMFY  365 (488)
Q Consensus       292 ~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-~g-~~~~~~~~----l~~~V~~~g~v~~~~l~~~~  365 (488)
                      +++++++.|++...|++..+++++.+.        ++++++++| .+ +..+.+++    ..++|+++|+++  ++.++|
T Consensus       202 ~~~il~~~G~~~~~k~~~~li~~l~~~--------~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~--~~~~l~  271 (380)
T PRK13609        202 KKILLIMAGAHGVLGNVKELCQSLMSV--------PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVE--NIDELF  271 (380)
T ss_pred             CcEEEEEcCCCCCCcCHHHHHHHHhhC--------CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechh--hHHHHH
Confidence            767777889998889999888887532        678888764 33 23444443    335899999964  799999


Q ss_pred             HhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeC-CCCccc---ceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHH
Q 011355          366 NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATR-LASIVG---SVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEK  441 (488)
Q Consensus       366 ~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~-~~~~~~---e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~  441 (488)
                      +.||++|.     ++.|++++|||+||+|||+++ .+|...   +.+.+.+.|+... |+++++++|.+++++ ++.+++
T Consensus       272 ~~aD~~v~-----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~-~~~~l~~~i~~ll~~-~~~~~~  344 (380)
T PRK13609        272 RVTSCMIT-----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIR-DDEEVFAKTEALLQD-DMKLLQ  344 (380)
T ss_pred             HhccEEEe-----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEEC-CHHHHHHHHHHHHCC-HHHHHH
Confidence            99999884     233789999999999999976 554321   1233233333332 999999999999998 899999


Q ss_pred             HHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Q 011355          442 KGLVARKRGLNLFTATKMAAAYERLFLCI  470 (488)
Q Consensus       442 ~~~~a~~~~~~~fs~~~~~~~~~~~~~~~  470 (488)
                      |++++++.... ++++++++.+.+++...
T Consensus       345 m~~~~~~~~~~-~s~~~i~~~i~~~~~~~  372 (380)
T PRK13609        345 MKEAMKSLYLP-EPADHIVDDILAENHVE  372 (380)
T ss_pred             HHHHHHHhCCC-chHHHHHHHHHHhhhhh
Confidence            99999887755 79999999998887553

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.96  E-value=3.7e-27  Score=232.95  Aligned_cols=277  Identities=17%  Similarity=0.137  Sum_probs=195.6

Q ss_pred             CCcEEEeCCcc---hHHhhhccCC--cEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLT--NVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      ..|+|++|++.   ++..+....|  ++...+|-.++..   +.+.-   .|   ....+.          +.+-.+|.+
T Consensus       131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~---e~~~~---lp---~~~~ll----------~~~l~~D~i  191 (460)
T cd03788         131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSS---EIFRC---LP---WREELL----------RGLLGADLI  191 (460)
T ss_pred             CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCCh---HHHhh---CC---ChHHHH----------HHHhcCCEE
Confidence            67999999864   3444443322  2788888653211   11100   01   001111          233458888


Q ss_pred             EEcChhhHHHHHHHh----c------------CCCCcEEEecCCccCCCcCCCccc---chhhhhhhCCCCCCcEEEEEE
Q 011355          239 VATSDHCGDVLKRIY----M------------IPEERVHVILNGVDEEVFKPDVAM---GKDFKKKFGIPENRSLVLGMA  299 (488)
Q Consensus       239 i~~S~~~~~~~~~~~----g------------~~~~~i~vi~ngvd~~~~~~~~~~---~~~~r~~~~i~~~~~~~i~~~  299 (488)
                      .+.+....+.+.+..    +            -...++.++|||||.+.|.+....   ....++..+..+++ .+|+++
T Consensus       192 gF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~il~v  270 (460)
T cd03788         192 GFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGR-KLIVGV  270 (460)
T ss_pred             EECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCC-EEEEEe
Confidence            888866555444421    1            123478999999999888654222   12233344555555 788899


Q ss_pred             eeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCC-----Cchh----HHhhh--------C----CcEE-EeCccC
Q 011355          300 GRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDG-----PWGA----RYRDL--------G----TNVI-VLGPLD  357 (488)
Q Consensus       300 Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g-----~~~~----~~~~l--------~----~~V~-~~g~v~  357 (488)
                      ||+++.||++.+++|++.+.+++++++.+++|+++|.+     +..+    .++++        +    ..|+ +.|.++
T Consensus       271 gRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~  350 (460)
T cd03788         271 DRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLP  350 (460)
T ss_pred             cCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCC
Confidence            99999999999999999998888222224788888643     2222    22222        1    2354 457889


Q ss_pred             HHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCc----EEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHH
Q 011355          358 QTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP----LMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIW  432 (488)
Q Consensus       358 ~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~P----VI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll  432 (488)
                      .+++..+|+.||++|+||.+ ||||++++|||+||+|    ||+|+.+|.. +.   +.+|+++++ |+++++++|.+++
T Consensus       351 ~~el~~~y~~aDv~v~pS~~-Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~-~~---~~~g~lv~p~d~~~la~ai~~~l  425 (460)
T cd03788         351 REELAALYRAADVALVTPLR-DGMNLVAKEYVACQDDDPGVLILSEFAGAA-EE---LSGALLVNPYDIDEVADAIHRAL  425 (460)
T ss_pred             HHHHHHHHHhccEEEeCccc-cccCcccceeEEEecCCCceEEEeccccch-hh---cCCCEEECCCCHHHHHHHHHHHH
Confidence            99999999999999999985 9999999999999999    9999988877 33   578999999 9999999999999


Q ss_pred             hcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHH
Q 011355          433 ADGREVLEKKGLVARKRGLNLFTATKMAAAYERL  466 (488)
Q Consensus       433 ~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~  466 (488)
                      ++++++++.+++++++++.+ ||++..++++.+-
T Consensus       426 ~~~~~e~~~~~~~~~~~v~~-~~~~~w~~~~l~~  458 (460)
T cd03788         426 TMPLEERRERHRKLREYVRT-HDVQAWANSFLDD  458 (460)
T ss_pred             cCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHh
Confidence            98678899999999999854 9999999988653

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.96  E-value=2e-26  Score=225.54  Aligned_cols=275  Identities=17%  Similarity=0.161  Sum_probs=200.1

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .-|+|++|++.   ++..+....|.  +...+|-.++.   .+++.                .+.....-++.+-.+|.|
T Consensus       127 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~---~e~f~----------------~lp~r~~il~gll~~dli  187 (456)
T TIGR02400       127 PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPS---SEIYR----------------TLPWRRELLEGLLAYDLV  187 (456)
T ss_pred             CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCC---hHHHh----------------hCCcHHHHHHHHhcCCEE
Confidence            46899999864   45555554443  56677754221   11111                111111112445689999


Q ss_pred             EEcChhhHHHHHHHh----cC-----------CCCcEEEecCCccCCCcCCCccc------chhhhhhhCCCCCCcEEEE
Q 011355          239 VATSDHCGDVLKRIY----MI-----------PEERVHVILNGVDEEVFKPDVAM------GKDFKKKFGIPENRSLVLG  297 (488)
Q Consensus       239 i~~S~~~~~~~~~~~----g~-----------~~~~i~vi~ngvd~~~~~~~~~~------~~~~r~~~~i~~~~~~~i~  297 (488)
                      -+.+....+.+.+..    |.           ...++.++|||||.+.|.+....      ...+|++++   ++ .+|+
T Consensus       188 gF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~-~vIl  263 (456)
T TIGR02400       188 GFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLK---GR-KLII  263 (456)
T ss_pred             EECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcC---CC-eEEE
Confidence            999988887776632    21           34578899999999988653221      124566663   44 6888


Q ss_pred             EEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEe-----CCCchhHHh----hh--------C-----CcEEEeCc
Q 011355          298 MAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-----DGPWGARYR----DL--------G-----TNVIVLGP  355 (488)
Q Consensus       298 ~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-----~g~~~~~~~----~l--------~-----~~V~~~g~  355 (488)
                      ++||+++.||++.+++|++.+.+++++.+.++.|+++|     +++..+.++    ++        +     +-+.+.|.
T Consensus       264 ~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~  343 (456)
T TIGR02400       264 GVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRS  343 (456)
T ss_pred             EccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCC
Confidence            99999999999999999999988883222346788775     333332222    22        0     12344568


Q ss_pred             cCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCc----EEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHH
Q 011355          356 LDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP----LMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYG  430 (488)
Q Consensus       356 v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~P----VI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~  430 (488)
                      ++.+++..+|+.||++++||.+ ||||++++||||||+|    ||+|+.+|.. +.+.   +|++++| |+++++++|.+
T Consensus       344 ~~~~el~aly~aaDv~vv~S~~-EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~-~~l~---~gllVnP~d~~~lA~aI~~  418 (456)
T TIGR02400       344 YDREELMALYRAADVGLVTPLR-DGMNLVAKEYVAAQDPKDGVLILSEFAGAA-QELN---GALLVNPYDIDGMADAIAR  418 (456)
T ss_pred             CCHHHHHHHHHhCcEEEECccc-cccCccHHHHHHhcCCCCceEEEeCCCCCh-HHhC---CcEEECCCCHHHHHHHHHH
Confidence            8999999999999999999985 9999999999999999    9999999987 4442   7999999 99999999999


Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          431 IWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       431 ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                      ++++++++++++.+++++++.+ ||+...++++.+-+
T Consensus       419 aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l  454 (456)
T TIGR02400       419 ALTMPLEEREERHRAMMDKLRK-NDVQRWREDFLSDL  454 (456)
T ss_pred             HHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHh
Confidence            9998789999999999999866 89999999987644

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.95  E-value=3.8e-26  Score=220.78  Aligned_cols=318  Identities=20%  Similarity=0.153  Sum_probs=212.3

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCCCccCcc-------hh
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKPTAAGYL-------DQ  148 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~-------~~  148 (488)
                      +|++.+.      ..||..+.+..++++|.++||+|++++..........  .+.....+..........+       ..
T Consensus         1 ~~~~~~~------~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (350)
T cd03785           1 RILIAGG------GTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKL   74 (350)
T ss_pred             CEEEEec------CchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccccCCceEEEEecCcCCCChHHHHHHHHHH
Confidence            3555554      6689999999999999999999999988653222111  1223223322211001111       11


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEeCCcc--hH---HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHH
Q 011355          149 SIVWQQLQTQNSTGKPFDVIHTESVG--LR---HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERAS  223 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Dvv~~~~~~--~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      ...+..+.+..++. +||+||+++..  +.   .....++| ++...|+..               +     ..    ..
T Consensus        75 ~~~~~~~~~~i~~~-~pDvI~~~~~~~~~~~~~~a~~~~~p-~v~~~~~~~---------------~-----~~----~~  128 (350)
T cd03785          75 LKGVLQARKILKKF-KPDVVVGFGGYVSGPVGLAAKLLGIP-LVIHEQNAV---------------P-----GL----AN  128 (350)
T ss_pred             HHHHHHHHHHHHhc-CCCEEEECCCCcchHHHHHHHHhCCC-EEEEcCCCC---------------c-----cH----HH
Confidence            22223334444444 89999998632  22   12223456 554333311               0     00    11


Q ss_pred             HHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeec
Q 011355          224 KVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV  303 (488)
Q Consensus       224 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~  303 (488)
                      +     ..++.+|.++++|+...+.      ++..++.+++||+|.+.+....     .++++++++++ .+++++|+..
T Consensus       129 ~-----~~~~~~~~vi~~s~~~~~~------~~~~~~~~i~n~v~~~~~~~~~-----~~~~~~~~~~~-~~i~~~~g~~  191 (350)
T cd03785         129 R-----LLARFADRVALSFPETAKY------FPKDKAVVTGNPVREEILALDR-----ERARLGLRPGK-PTLLVFGGSQ  191 (350)
T ss_pred             H-----HHHHhhCEEEEcchhhhhc------CCCCcEEEECCCCchHHhhhhh-----hHHhcCCCCCC-eEEEEECCcH
Confidence            1     2335689999999988765      3568999999999987664421     17778887777 5666777666


Q ss_pred             cccChHH-HHHHHHHhHhhccCCCCCeE-EEEEeCCCchhHHhh----hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC
Q 011355          304 KDKGHPL-MFEALKQLLAENDTFRRSTV-FLVAGDGPWGARYRD----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       304 ~~Kg~~~-ll~a~~~l~~~~~~~~~~~~-l~ivG~g~~~~~~~~----l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~  377 (488)
                      ..|+... +++++..+.+      +++. ++++|+|. .+.+++    +.++|++.|++  +++.++|+.||++|.++  
T Consensus       192 ~~~~~~~~l~~a~~~l~~------~~~~~~~i~G~g~-~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~s--  260 (350)
T cd03785         192 GARAINEAVPEALAELLR------KRLQVIHQTGKGD-LEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISRA--  260 (350)
T ss_pred             hHHHHHHHHHHHHHHhhc------cCeEEEEEcCCcc-HHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEECC--
Confidence            6677654 5588887763      3555 45778873 344433    33689999996  69999999999999755  


Q ss_pred             CCCCChHHHHHHHcCCcEEEeCCCCc--------ccceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011355          378 AQGLDHTVLEAMLSGKPLMATRLASI--------VGSVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKKGLVA  446 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~~~~~~--------~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~a  446 (488)
                        | +++++|||++|+|||+++.++.        . +.+.+.++|+++++   |+++++++|.+++++ ++.+++|++++
T Consensus       261 --g-~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~-~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~  335 (350)
T cd03785         261 --G-ASTVAELAALGLPAILIPLPYAADDHQTANA-RALVKAGAAVLIPQEELTPERLAAALLELLSD-PERLKAMAEAA  335 (350)
T ss_pred             --C-HhHHHHHHHhCCCEEEeecCCCCCCcHHHhH-HHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHH
Confidence              2 5799999999999999876541        2 45667789999985   699999999999988 99999999999


Q ss_pred             HHHHhhhCCHHHHHH
Q 011355          447 RKRGLNLFTATKMAA  461 (488)
Q Consensus       447 ~~~~~~~fs~~~~~~  461 (488)
                      ++++.. +..+++++
T Consensus       336 ~~~~~~-~~~~~i~~  349 (350)
T cd03785         336 RSLARP-DAAERIAD  349 (350)
T ss_pred             HhcCCC-CHHHHHHh
Confidence            998854 67776654

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.95  E-value=5.1e-25  Score=213.73  Aligned_cols=217  Identities=19%  Similarity=0.130  Sum_probs=157.7

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChH
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHP  309 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~  309 (488)
                      ..++++|.|+++|+...+.+.+ ++   .++++++||+|.+.|.+........+...  ..++ ++++|+|++.+.++++
T Consensus       149 ~~~~~ad~vi~~S~~l~~~~~~-~~---~~i~~i~ngvd~~~f~~~~~~~~~~~~~~--~~~~-~~i~y~G~l~~~~d~~  221 (373)
T cd04950         149 RLLKRADLVFTTSPSLYEAKRR-LN---PNVVLVPNGVDYEHFAAARDPPPPPADLA--ALPR-PVIGYYGAIAEWLDLE  221 (373)
T ss_pred             HHHHhCCEEEECCHHHHHHHhh-CC---CCEEEcccccCHHHhhcccccCCChhHHh--cCCC-CEEEEEeccccccCHH
Confidence            5678999999999999998877 44   68999999999988865432211111111  1233 7899999999977776


Q ss_pred             HHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh--CCcEEEeCccCHHHHHHHHHhcCEEEeCCCC----CCCCCh
Q 011355          310 LMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR----AQGLDH  383 (488)
Q Consensus       310 ~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~----~eg~~~  383 (488)
                      .+.++.+    ..    |+++|+++|.++.......+  .+||+++|.++.+++..+|+.+|++++|+..    .+++|+
T Consensus       222 ll~~la~----~~----p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~  293 (373)
T cd04950         222 LLEALAK----AR----PDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPL  293 (373)
T ss_pred             HHHHHHH----HC----CCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcc
Confidence            5544333    34    89999999987332222222  3799999999999999999999999999853    246899


Q ss_pred             HHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          384 TVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       384 ~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      +++||||||+|||+++.+++.    ...+.+++++.|+++++++|.+++.++......   ++++ +.+.|||++.++++
T Consensus       294 Kl~EylA~G~PVVat~~~~~~----~~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~---~~~~-~~~~~sW~~~a~~~  365 (373)
T cd04950         294 KLFEYLAAGKPVVATPLPEVR----RYEDEVVLIADDPEEFVAAIEKALLEDGPARER---RRLR-LAAQNSWDARAAEM  365 (373)
T ss_pred             hHHHHhccCCCEEecCcHHHH----hhcCcEEEeCCCHHHHHHHHHHHHhcCCchHHH---HHHH-HHHHCCHHHHHHHH
Confidence            999999999999999875543    333445555448999999999976652322222   2222 44568999999999


Q ss_pred             HHHHHH
Q 011355          464 ERLFLC  469 (488)
Q Consensus       464 ~~~~~~  469 (488)
                      .+.+.+
T Consensus       366 ~~~l~~  371 (373)
T cd04950         366 LEALQE  371 (373)
T ss_pred             HHHHHh
Confidence            866554

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.95  E-value=9.2e-26  Score=218.32  Aligned_cols=302  Identities=15%  Similarity=0.115  Sum_probs=195.1

Q ss_pred             CCcEEEeCCcc----hHHhh--hccCCcEEEeeeCCcchhh-hhh---hhHhhhcCCCChhHHHHHHHHHHHHHHhhhcC
Q 011355          164 PFDVIHTESVG----LRHTR--ARNLTNVVVSWHGIAYETI-HSD---IIQELLRTPEEPQAYALAERASKVVEEVKFFP  233 (488)
Q Consensus       164 ~~Dvv~~~~~~----~~~~~--~~~~p~~v~~~h~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (488)
                      ++|++|+|.+.    +....  ...+| .+.+.|....-.. +..   ++..+........ ..-.....+...|.....
T Consensus       148 ~~dViH~HeWm~g~a~~~lK~~~~~Vp-tVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~e-A~~~~I~~r~~iE~~aa~  225 (590)
T cd03793         148 PAVVAHFHEWQAGVGLPLLRKRKVDVS-TIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKE-AGKRGIYHRYCIERAAAH  225 (590)
T ss_pred             CCeEEEEcchhHhHHHHHHHHhCCCCC-EEEEecccccccccccCCcccchhhhhcchhhh-hhcccchHHHHHHHHHHh
Confidence            79999999742    22222  12456 9999997543221 111   1111100000000 000011122223445678


Q ss_pred             CccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCccc---------------chhhhhhhCCCCCCcEEEEE
Q 011355          234 KYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAM---------------GKDFKKKFGIPENRSLVLGM  298 (488)
Q Consensus       234 ~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~---------------~~~~r~~~~i~~~~~~~i~~  298 (488)
                      .||.++++|+.+++.+...|+.++++  |||||+|...|....+.               +..++.++++++++++++..
T Consensus       226 ~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~  303 (590)
T cd03793         226 CAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFT  303 (590)
T ss_pred             hCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEE
Confidence            89999999999999999999998877  99999999998765421               23467778887777444444


Q ss_pred             Eeeecc-ccChHHHHHHHHHhHhhccCCCCC---eEEEEEeCCCc-----------------------------------
Q 011355          299 AGRLVK-DKGHPLMFEALKQLLAENDTFRRS---TVFLVAGDGPW-----------------------------------  339 (488)
Q Consensus       299 ~Grl~~-~Kg~~~ll~a~~~l~~~~~~~~~~---~~l~ivG~g~~-----------------------------------  339 (488)
                      +||++. +||++.+|+|+.++......-..+   +-|+++.....                                   
T Consensus       304 ~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~  383 (590)
T cd03793         304 AGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAA  383 (590)
T ss_pred             eeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHh
Confidence            899988 999999999999887621000022   23444432200                                   


Q ss_pred             -------hhHH---------h--------------------------------h--h----CC--cEEEeC-ccC-----
Q 011355          340 -------GARY---------R--------------------------------D--L----GT--NVIVLG-PLD-----  357 (488)
Q Consensus       340 -------~~~~---------~--------------------------------~--l----~~--~V~~~g-~v~-----  357 (488)
                             .+++         +                                .  |    .+  +|+|.+ +++     
T Consensus       384 l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~  463 (590)
T cd03793         384 LKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPL  463 (590)
T ss_pred             hccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCc
Confidence                   0000         0                                0  1    12  255554 222     


Q ss_pred             -HHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcc---cceeecC-CceeEeC-------C-CHHHH
Q 011355          358 -QTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIV---GSVIVGT-DMGYLFS-------P-QVESV  424 (488)
Q Consensus       358 -~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~---~e~v~~~-~~g~l~~-------~-d~~~l  424 (488)
                       ..+..++|+.||++|+||.+ ||||++++|||+||+|||+|+.+|..   .|++.++ ..|+.+.       + +++++
T Consensus       464 ~g~~y~E~~~g~dl~v~PS~y-E~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~L  542 (590)
T cd03793         464 LGLDYEEFVRGCHLGVFPSYY-EPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQL  542 (590)
T ss_pred             CCcchHHHhhhceEEEecccc-CCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHH
Confidence             33577899999999999986 99999999999999999999999883   1455444 3566665       3 68899


Q ss_pred             HHHHHHHHhcCHHHHHHHHHHHH-HHHhhhCCHHHHHHHHHHHHHHhhc
Q 011355          425 KKALYGIWADGREVLEKKGLVAR-KRGLNLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       425 a~~i~~ll~~~~~~~~~~~~~a~-~~~~~~fs~~~~~~~~~~~~~~~~~  472 (488)
                      +++|.++++.  +.++.+.+++. +...+.|+|+++++.|.+.|+..+.
T Consensus       543 a~~m~~~~~~--~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~  589 (590)
T cd03793         543 TQYMYEFCQL--SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS  589 (590)
T ss_pred             HHHHHHHhCC--cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence            9999998855  45555555543 3344669999999999999987654

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.95  E-value=1.2e-25  Score=218.95  Aligned_cols=342  Identities=12%  Similarity=0.067  Sum_probs=226.4

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCC---eEEEEecCCCCCCCCC-----------CCCceEE-EecCC
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGH---ELHIFTASCLNCSFPT-----------YPISSLY-FHLSK  139 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~---~V~v~~~~~~~~~~~~-----------~~~~~i~-~~~~~  139 (488)
                      +.|||++++.+     ..+|....+..|.++|.+.|.   +|.++-.-........           ...+.+. ..+..
T Consensus         4 ~~~~vlil~~~-----~G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~   78 (391)
T PRK13608          4 QNKKILIITGS-----FGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYS   78 (391)
T ss_pred             CCceEEEEECC-----CCchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHc
Confidence            45799999973     457888889999999988754   4554432211111111           0111111 00000


Q ss_pred             CC-c-cCcchhHHHHHHHHHHhcCCCCCcEEEeCCcchHHh--h---hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCC
Q 011355          140 PT-A-AGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHT--R---ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEE  212 (488)
Q Consensus       140 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~--~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  212 (488)
                      .. . ...+.....+..+.+..++. +||+|+++.+.....  .   ..++| ++....+..   .|             
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~l~~~-kPDvVi~~~p~~~~~~l~~~~~~~iP-~~~v~td~~---~~-------------  140 (391)
T PRK13608         79 RPDKLDKCFYKYYGLNKLINLLIKE-KPDLILLTFPTPVMSVLTEQFNINIP-VATVMTDYR---LH-------------  140 (391)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHh-CcCEEEECCcHHHHHHHHHhcCCCCC-EEEEeCCCC---cc-------------
Confidence            00 0 00001111123344444444 999999976432222  1   12456 544333320   00             


Q ss_pred             hhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCC
Q 011355          213 PQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENR  292 (488)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~  292 (488)
                                     ..+..+.+|.+++.|+.+++.+.+ .|++.+++.+++++++..+....  .....++++++++++
T Consensus       141 ---------------~~w~~~~~d~~~v~s~~~~~~l~~-~gi~~~ki~v~GiPv~~~f~~~~--~~~~~~~~~~l~~~~  202 (391)
T PRK13608        141 ---------------KNWITPYSTRYYVATKETKQDFID-VGIDPSTVKVTGIPIDNKFETPI--DQKQWLIDNNLDPDK  202 (391)
T ss_pred             ---------------cccccCCCCEEEECCHHHHHHHHH-cCCCHHHEEEECeecChHhcccc--cHHHHHHHcCCCCCC
Confidence                           003357899999999999999988 69999999999888875433222  235677889998877


Q ss_pred             cEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEE-eCCC-chhHHhh---hCCcEEEeCccCHHHHHHHHHh
Q 011355          293 SLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVA-GDGP-WGARYRD---LGTNVIVLGPLDQTRLAMFYNA  367 (488)
Q Consensus       293 ~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~g~-~~~~~~~---l~~~V~~~g~v~~~~l~~~~~~  367 (488)
                      +.++++.|++...||++.+++++.   +..    ++++++++ |+++ ..+.+++   ..++|+++|++  +++.++|+.
T Consensus       203 ~~ilv~~G~lg~~k~~~~li~~~~---~~~----~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~--~~~~~~~~~  273 (391)
T PRK13608        203 QTILMSAGAFGVSKGFDTMITDIL---AKS----ANAQVVMICGKSKELKRSLTAKFKSNENVLILGYT--KHMNEWMAS  273 (391)
T ss_pred             CEEEEECCCcccchhHHHHHHHHH---hcC----CCceEEEEcCCCHHHHHHHHHHhccCCCeEEEecc--chHHHHHHh
Confidence            677778999998899999999853   233    67888655 5443 2233433   23689999996  489999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeC-CCCccc---ceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHH
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATR-LASIVG---SVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKG  443 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~-~~~~~~---e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~  443 (488)
                      ||++|..     +.|+++.|||++|+|+|+++ .++..+   ..+.+.+.|+... |.++++++|.+++++ ++.+++|+
T Consensus       274 aDl~I~k-----~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~-~~~~l~~~i~~ll~~-~~~~~~m~  346 (391)
T PRK13608        274 SQLMITK-----PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD-TPEEAIKIVASLTNG-NEQLTNMI  346 (391)
T ss_pred             hhEEEeC-----CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC-CHHHHHHHHHHHhcC-HHHHHHHH
Confidence            9999962     23789999999999999986 333110   2334556676655 999999999999998 89999999


Q ss_pred             HHHHHHHhhhCCHHHHHHHHHHHHHHhhccc
Q 011355          444 LVARKRGLNLFTATKMAAAYERLFLCISNDE  474 (488)
Q Consensus       444 ~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~  474 (488)
                      +++++.... |+++.+++.+.++++.+....
T Consensus       347 ~~~~~~~~~-~s~~~i~~~l~~l~~~~~~~~  376 (391)
T PRK13608        347 STMEQDKIK-YATQTICRDLLDLIGHSSQPQ  376 (391)
T ss_pred             HHHHHhcCC-CCHHHHHHHHHHHhhhhhhhh
Confidence            999998765 899999999999998766543

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.95  E-value=2.7e-25  Score=214.71  Aligned_cols=318  Identities=18%  Similarity=0.134  Sum_probs=200.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC--CCCCCceEEEecCCCCccCc-------ch
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSF--PTYPISSLYFHLSKPTAAGY-------LD  147 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~-------~~  147 (488)
                      |||++++.      ..||.......|+++|.++||+|++++........  ...+.+...+........+.       +.
T Consensus         1 ~~i~~~~g------~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~   74 (348)
T TIGR01133         1 KKVVLAAG------GTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLK   74 (348)
T ss_pred             CeEEEEeC------ccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCCCceEEEeccCcCCCChHHHHHHHHH
Confidence            68998886      45666667779999999999999999864321111  11223333333221111111       11


Q ss_pred             hHHHHHHHHHHhcCCCCCcEEEeCCcc--hHH---hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          148 QSIVWQQLQTQNSTGKPFDVIHTESVG--LRH---TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Dvv~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      .......+.+..++. +||+||+++..  +..   ....++| ++...++..               +     ...    
T Consensus        75 ~~~~~~~l~~~i~~~-~pDvVi~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~---------------~-----~~~----  128 (348)
T TIGR01133        75 LLKAVFQARRILKKF-KPDAVIGFGGYVSGPAGLAAKLLGIP-LFHHEQNAV---------------P-----GLT----  128 (348)
T ss_pred             HHHHHHHHHHHHHhc-CCCEEEEcCCcccHHHHHHHHHcCCC-EEEECCCCC---------------c-----cHH----
Confidence            122233333334444 89999998632  221   2223445 543222110               0     011    


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      .+     ..++.+|.++++|+.+.+.+         +..+++||+|...+.+..     .+++++++++. ++++++|+.
T Consensus       129 ~~-----~~~~~~d~ii~~~~~~~~~~---------~~~~i~n~v~~~~~~~~~-----~~~~~~~~~~~-~~i~~~gg~  188 (348)
T TIGR01133       129 NK-----LLSRFAKKVLISFPGAKDHF---------EAVLVGNPVRQEIRSLPV-----PRERFGLREGK-PTILVLGGS  188 (348)
T ss_pred             HH-----HHHHHhCeeEECchhHhhcC---------CceEEcCCcCHHHhcccc-----hhhhcCCCCCC-eEEEEECCc
Confidence            11     23456899999999776654         237999999876553321     13456777666 778899887


Q ss_pred             ccccChHH-HHHHHHHhHhhccCCCCCeEE-EEEeCCCchhHHhhh-C-Cc-EEEeCccCHHHHHHHHHhcCEEEeCCCC
Q 011355          303 VKDKGHPL-MFEALKQLLAENDTFRRSTVF-LVAGDGPWGARYRDL-G-TN-VIVLGPLDQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       303 ~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~l-~ivG~g~~~~~~~~l-~-~~-V~~~g~v~~~~l~~~~~~adv~v~ps~~  377 (488)
                      ...|++.. ++++++.+.+.      +.++ +++|+++. +.+++. . .+ .....+... ++.++|+.||++|.++  
T Consensus       189 ~~~~~~~~~l~~a~~~l~~~------~~~~~~~~g~~~~-~~l~~~~~~~~l~~~v~~~~~-~~~~~l~~ad~~v~~~--  258 (348)
T TIGR01133       189 QGAKILNELVPKALAKLAEK------GIQIVHQTGKNDL-EKVKNVYQELGIEAIVTFIDE-NMAAAYAAADLVISRA--  258 (348)
T ss_pred             hhHHHHHHHHHHHHHHHhhc------CcEEEEECCcchH-HHHHHHHhhCCceEEecCccc-CHHHHHHhCCEEEECC--
Confidence            77888654 55888877653      3444 45555543 444431 1 11 122223323 8999999999999754  


Q ss_pred             CCCCChHHHHHHHcCCcEEEeCCCCccc------ceeecCCceeEeCC-C--HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011355          378 AQGLDHTVLEAMLSGKPLMATRLASIVG------SVIVGTDMGYLFSP-Q--VESVKKALYGIWADGREVLEKKGLVARK  448 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~~~~~~~~------e~v~~~~~g~l~~~-d--~~~la~~i~~ll~~~~~~~~~~~~~a~~  448 (488)
                        | |++++|||++|+|+|+++.++..+      +++.++++|+++++ |  +++++++|.+++++ ++.+++|++++++
T Consensus       259 --g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~  334 (348)
T TIGR01133       259 --G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARK  334 (348)
T ss_pred             --C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHh
Confidence              3 689999999999999998765321      46778899999987 6  99999999999998 9999999999998


Q ss_pred             HHhhhCCHHHHHH
Q 011355          449 RGLNLFTATKMAA  461 (488)
Q Consensus       449 ~~~~~fs~~~~~~  461 (488)
                      ++.+ ...+++++
T Consensus       335 ~~~~-~~~~~i~~  346 (348)
T TIGR01133       335 LAKP-DAAKRIAE  346 (348)
T ss_pred             cCCc-cHHHHHHh
Confidence            8855 45665554

RL J Bacteriol 1993 Mar;175(6):1841-3

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.95  E-value=3.7e-25  Score=215.25  Aligned_cols=221  Identities=14%  Similarity=0.146  Sum_probs=173.7

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChH
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHP  309 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~  309 (488)
                      ++.+.+|.++++|+..++.+.+ +|++++++.+++++++.++.... ..+..+|+++|+++++ ++++++|+....|++.
T Consensus       146 w~~~~~d~~~~~s~~~~~~l~~-~g~~~~ki~v~g~~v~~~f~~~~-~~~~~~r~~~gl~~~~-~~il~~Gg~~g~~~~~  222 (382)
T PLN02605        146 WFHKGVTRCFCPSEEVAKRALK-RGLEPSQIRVYGLPIRPSFARAV-RPKDELRRELGMDEDL-PAVLLMGGGEGMGPLE  222 (382)
T ss_pred             cccCCCCEEEECCHHHHHHHHH-cCCCHHHEEEECcccCHhhccCC-CCHHHHHHHcCCCCCC-cEEEEECCCcccccHH
Confidence            4467899999999999999988 69999999999999987654332 3456789999998877 7788999998999999


Q ss_pred             HHHHHHHHhHh----hccCCCCCeE-EEEEeCCC-chhHHhhh--CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCC
Q 011355          310 LMFEALKQLLA----ENDTFRRSTV-FLVAGDGP-WGARYRDL--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGL  381 (488)
Q Consensus       310 ~ll~a~~~l~~----~~~~~~~~~~-l~ivG~g~-~~~~~~~l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~  381 (488)
                      .+++++..+..    ..    ++.+ ++++|+++ ..+.+++.  ..+|+++|+++  ++.++|++||++|.++    | 
T Consensus       223 ~li~~l~~~~~~~~~~~----~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~--~~~~l~~aaDv~V~~~----g-  291 (382)
T PLN02605        223 ETARALGDSLYDKNLGK----PIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVT--NMEEWMGACDCIITKA----G-  291 (382)
T ss_pred             HHHHHHHHhhccccccC----CCceEEEEECCCHHHHHHHHhhcccCCeEEEeccc--cHHHHHHhCCEEEECC----C-
Confidence            99999976541    12    4554 67888764 34555543  35799999975  8999999999999854    2 


Q ss_pred             ChHHHHHHHcCCcEEEeCCC-----CcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCH
Q 011355          382 DHTVLEAMLSGKPLMATRLA-----SIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTA  456 (488)
Q Consensus       382 ~~~~lEAma~G~PVI~~~~~-----~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~  456 (488)
                      |++++|||+||+|+|+++..     +.. +.+.+++.|+.+. |+++++++|.++++++++.+++|++++++.... .+.
T Consensus       292 ~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~~~-~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~-~a~  368 (382)
T PLN02605        292 PGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAFSE-SPKEIARIVAEWFGDKSDELEAMSENALKLARP-EAV  368 (382)
T ss_pred             cchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceeecC-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-chH
Confidence            67999999999999999842     112 3345566777654 999999999999986578899999999998866 578


Q ss_pred             HHHHHHHHHHH
Q 011355          457 TKMAAAYERLF  467 (488)
Q Consensus       457 ~~~~~~~~~~~  467 (488)
                      +.+++.+.++.
T Consensus       369 ~~i~~~l~~~~  379 (382)
T PLN02605        369 FDIVHDLHELV  379 (382)
T ss_pred             HHHHHHHHHHh
Confidence            88887776553

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=1.2e-24  Score=206.35  Aligned_cols=390  Identities=17%  Similarity=0.127  Sum_probs=262.5

Q ss_pred             CCCCCCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHH---------CCCeEEEEecCCCCCCCCC---------CC-C
Q 011355           70 SNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAK---------RGHELHIFTASCLNCSFPT---------YP-I  130 (488)
Q Consensus        70 ~~~~~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~---------~G~~V~v~~~~~~~~~~~~---------~~-~  130 (488)
                      +++.+..++++++++    ....||.++-....+-.+..         .|++|.+++..........         .. .
T Consensus        28 ~t~~~~~~~~~~~~~----~~~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~  103 (495)
T KOG0853|consen   28 STPEKPFEHVTFIHP----DLGIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTP  103 (495)
T ss_pred             ccccccchhheeecc----ccccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCC
Confidence            444556788999987    44789999998888888888         9999999998765542111         22 1


Q ss_pred             ceEEEecCCCCccC-cchh----------HHHHHHHHHHhcCCCCCcEEEeCCcchHHhhhc--c----CCcEEEeeeCC
Q 011355          131 SSLYFHLSKPTAAG-YLDQ----------SIVWQQLQTQNSTGKPFDVIHTESVGLRHTRAR--N----LTNVVVSWHGI  193 (488)
Q Consensus       131 ~~i~~~~~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~--~----~p~~v~~~h~~  193 (488)
                      +...+-...|...+ ....          ...+....+..  . +.|+++........++..  .    ++++.++.|..
T Consensus       104 ~i~vv~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~-~~d~~i~d~~~~~~~l~~~~~~p~~~~~i~~~~h~~  180 (495)
T KOG0853|consen  104 PILVVGDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--E-KVDPIIEDFVSACVPLLKQLSGPDVIIKIYFYCHFP  180 (495)
T ss_pred             ceEEEEeecCcccchhhhhhhccceeEEEEeccchhhhhh--h-hhceeecchHHHHHHHHHHhcCCcccceeEEeccch
Confidence            22222111121111 0000          00010111111  1 678888875433222221  1    34366667765


Q ss_pred             cchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHh-cCCCCcEEEecCCccCCCc
Q 011355          194 AYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIY-MIPEERVHVILNGVDEEVF  272 (488)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~-g~~~~~i~vi~ngvd~~~~  272 (488)
                      .-...+...           ..+.+++......+ ......++.+++.|...+..+...+ .++..++.+++..+|.+.+
T Consensus       181 ~~lla~r~g-----------~~~~l~~~~l~~~e-~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~  248 (495)
T KOG0853|consen  181 DSLLAKRLG-----------VLKVLYRHALDKIE-EETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWF  248 (495)
T ss_pred             HHHhccccC-----------ccceeehhhhhhhh-hhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhc
Confidence            333322210           00122222211111 1446788999999999999998865 3555568899999998776


Q ss_pred             CC-----CcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccC-CCCCeEEEEEeCC-------Cc
Q 011355          273 KP-----DVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDT-FRRSTVFLVAGDG-------PW  339 (488)
Q Consensus       273 ~~-----~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~-~~~~~~l~ivG~g-------~~  339 (488)
                      .+     ..+.+...|.+.+....+ ..+..+.++.+.||++.+++++..+....++ -.++.+++++|+.       +.
T Consensus       249 ~~~~~~~~~~~~~~~r~~~~v~~~d-~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen  327 (495)
T KOG0853|consen  249 TYGQYESHLELRLPVRLYRGVSGID-RFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSEN  327 (495)
T ss_pred             cccccccchhcccccceeeeecccc-eEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhh
Confidence            54     222334455556666555 6778899999999999999999999887621 0135788888832       11


Q ss_pred             hhHHhh----------hCCcEEEeCccCHHHHHHHHHhcCE-EEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccccee
Q 011355          340 GARYRD----------LGTNVIVLGPLDQTRLAMFYNAIDI-FVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVI  408 (488)
Q Consensus       340 ~~~~~~----------l~~~V~~~g~v~~~~l~~~~~~adv-~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v  408 (488)
                      ...+++          .++.|.|+...++.+...+++.+.+ +..|.  .|.||++++|||+||+|||+++.||.. |++
T Consensus       328 ~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa--~E~FGiv~IEAMa~glPvvAt~~GGP~-EiV  404 (495)
T KOG0853|consen  328 VEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPA--NEHFGIVPIEAMACGLPVVATNNGGPA-EIV  404 (495)
T ss_pred             HHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCC--CCCccceeHHHHhcCCCEEEecCCCce-EEE
Confidence            122222          2577889898777777666667766 44566  399999999999999999999999988 999


Q ss_pred             ecCCceeEeCCCHH---HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhccccCCCCCccc
Q 011355          409 VGTDMGYLFSPQVE---SVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGENNCKY  483 (488)
Q Consensus       409 ~~~~~g~l~~~d~~---~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (488)
                      .++.+|++++++.+   .+++++.++..| ++.+.+|++++++++.+.|+|.++.+++.++........+.+...|..
T Consensus       405 ~~~~tG~l~dp~~e~~~~~a~~~~kl~~~-p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~  481 (495)
T KOG0853|consen  405 VHGVTGLLIDPGQEAVAELADALLKLRRD-PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQWEKVSSLDSLE  481 (495)
T ss_pred             EcCCcceeeCCchHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcCCccccccccccc
Confidence            99999999999555   799999999999 999999999999999999999999999999998877655554444433

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.94  E-value=1.8e-25  Score=192.91  Aligned_cols=162  Identities=31%  Similarity=0.576  Sum_probs=142.0

Q ss_pred             hhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhh-ccCCCCCeEEEEEeCCCchhHHhh------hCCcEEE
Q 011355          280 KDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAE-NDTFRRSTVFLVAGDGPWGARYRD------LGTNVIV  352 (488)
Q Consensus       280 ~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~-~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~  352 (488)
                      ...+.+.+.+.++ ++++++|++.+.||++.+++++..+.++ .    +++.++|+|.++....++.      +.++|++
T Consensus         3 ~~~~~~~~~~~~~-~~il~~g~~~~~K~~~~li~a~~~l~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~   77 (172)
T PF00534_consen    3 DKLREKLKIPDKK-KIILFIGRLDPEKGIDLLIEAFKKLKEKKN----PNYKLVIVGDGEYKKELKNLIEKLNLKENIIF   77 (172)
T ss_dssp             HHHHHHTTT-TTS-EEEEEESESSGGGTHHHHHHHHHHHHHHHH----TTEEEEEESHCCHHHHHHHHHHHTTCGTTEEE
T ss_pred             HHHHHHcCCCCCC-eEEEEEecCccccCHHHHHHHHHHHHhhcC----CCeEEEEEcccccccccccccccccccccccc
Confidence            4566777776666 8999999999999999999999999875 6    8999999997766544443      4479999


Q ss_pred             eCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHH
Q 011355          353 LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGI  431 (488)
Q Consensus       353 ~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~l  431 (488)
                      .|.++.+++..+|+.||++|+||.. |++|++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.++
T Consensus        78 ~~~~~~~~l~~~~~~~di~v~~s~~-e~~~~~~~Ea~~~g~pvI~~~~~~~~-e~~~~~~~g~~~~~~~~~~l~~~i~~~  155 (172)
T PF00534_consen   78 LGYVPDDELDELYKSSDIFVSPSRN-EGFGLSLLEAMACGCPVIASDIGGNN-EIINDGVNGFLFDPNDIEELADAIEKL  155 (172)
T ss_dssp             EESHSHHHHHHHHHHTSEEEE-BSS-BSS-HHHHHHHHTT-EEEEESSTHHH-HHSGTTTSEEEESTTSHHHHHHHHHHH
T ss_pred             cccccccccccccccceeccccccc-cccccccccccccccceeeccccCCc-eeeccccceEEeCCCCHHHHHHHHHHH
Confidence            9999999999999999999999985 99999999999999999999999987 99999999999999 999999999999


Q ss_pred             HhcCHHHHHHHHHHHHHH
Q 011355          432 WADGREVLEKKGLVARKR  449 (488)
Q Consensus       432 l~~~~~~~~~~~~~a~~~  449 (488)
                      +++ ++.++.|+++++++
T Consensus       156 l~~-~~~~~~l~~~~~~~  172 (172)
T PF00534_consen  156 LND-PELRQKLGKNARER  172 (172)
T ss_dssp             HHH-HHHHHHHHHHHHHH
T ss_pred             HCC-HHHHHHHHHHhcCC
Confidence            999 89999999999875

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=3.1e-22  Score=176.73  Aligned_cols=370  Identities=15%  Similarity=0.141  Sum_probs=244.7

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCC------------CCCceEEEecCC-----
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCSFPT------------YPISSLYFHLSK-----  139 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~------------~~~~~i~~~~~~-----  139 (488)
                      .++|+++.   ....||+|+.+..-++.+++. -..+.|+..++.+.....            .+...+.+...+     
T Consensus        45 tvgfFHPY---CNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lV  121 (465)
T KOG1387|consen   45 TVGFFHPY---CNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRYLV  121 (465)
T ss_pred             EEEEeccc---ccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeeeee
Confidence            57888854   457889999999999999876 223444444332222111            122233332211     


Q ss_pred             --CCccCcchhHHHH----HHHHHHhcCCCCCcEEEeCC---cchHHhh-hccCCcEEEeeeCCcchhhhhhhhHhhhcC
Q 011355          140 --PTAAGYLDQSIVW----QQLQTQNSTGKPFDVIHTES---VGLRHTR-ARNLTNVVVSWHGIAYETIHSDIIQELLRT  209 (488)
Q Consensus       140 --~~~~~~~~~~~~~----~~~~~~~~~~~~~Dvv~~~~---~~~~~~~-~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~  209 (488)
                        ..+........+.    -.+.... +. .||+.+-..   ...+... ..++| ++...|-..   ...++.......
T Consensus       122 ea~~~~hfTllgQaigsmIl~~Eai~-r~-~Pdi~IDtMGY~fs~p~~r~l~~~~-V~aYvHYP~---iS~DML~~l~qr  195 (465)
T KOG1387|consen  122 EASTWKHFTLLGQAIGSMILAFEAII-RF-PPDIFIDTMGYPFSYPIFRRLRRIP-VVAYVHYPT---ISTDMLKKLFQR  195 (465)
T ss_pred             ecccccceehHHHHHHHHHHHHHHHH-hC-CchheEecCCCcchhHHHHHHccCc-eEEEEeccc---ccHHHHHHHHhh
Confidence              1111111111111    1111122 22 899987642   2334444 45667 888888543   234444444333


Q ss_pred             CCChh---HHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhh
Q 011355          210 PEEPQ---AYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKF  286 (488)
Q Consensus       210 ~~~~~---~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~  286 (488)
                      +....   .+..+.++...... ..-..+|.+++.|.|+.+++.+.++.  .++++++++++.+..          .+..
T Consensus       196 q~s~~l~~~KlaY~rlFa~lY~-~~G~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~l----------ks~~  262 (465)
T KOG1387|consen  196 QKSGILVWGKLAYWRLFALLYQ-SAGSKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDL----------KSKF  262 (465)
T ss_pred             hhcchhhhHHHHHHHHHHHHHH-hccccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHH----------HHHh
Confidence            32211   12222222221111 33478999999999999999998864  688899998887533          2222


Q ss_pred             CCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccC--CCCCeEEEEEeCCC---chhHHhh---------hCCcEEE
Q 011355          287 GIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDT--FRRSTVFLVAGDGP---WGARYRD---------LGTNVIV  352 (488)
Q Consensus       287 ~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~--~~~~~~l~ivG~g~---~~~~~~~---------l~~~V~~  352 (488)
                      +-...+...++++|.+.|+|++. +++.++....+.+.  .-++++|+++|+-.   +.++++.         +.++|.|
T Consensus       263 ~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F  341 (465)
T KOG1387|consen  263 GTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF  341 (465)
T ss_pred             cccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence            32233447899999999999999 66666554444311  11468999999732   2233332         3478999


Q ss_pred             eCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeec---CCceeEeCCCHHHHHHHHH
Q 011355          353 LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG---TDMGYLFSPQVESVKKALY  429 (488)
Q Consensus       353 ~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~---~~~g~l~~~d~~~la~~i~  429 (488)
                      .-.+|.+++..+|..|.+.|+.- +.|.||+.++|+||+|+-.|+.+.||..-+++.+   ..+|++.+ +.++.++++.
T Consensus       342 ~~N~Py~~lv~lL~~a~iGvh~M-wNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~-t~~EYaE~iL  419 (465)
T KOG1387|consen  342 EKNVPYEKLVELLGKATIGVHTM-WNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP-TDEEYAEAIL  419 (465)
T ss_pred             EecCCHHHHHHHhccceeehhhh-hhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC-ChHHHHHHHH
Confidence            99999999999999999999987 5799999999999999999999999876566654   35799887 8999999999


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhcc
Q 011355          430 GIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISND  473 (488)
Q Consensus       430 ~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~  473 (488)
                      +++..+.+++..|+++||..+.+ |+-.++-+.+...+..++..
T Consensus       420 kIv~~~~~~r~~~r~~AR~s~~R-FsE~~F~kd~~~~i~kll~e  462 (465)
T KOG1387|consen  420 KIVKLNYDERNMMRRNARKSLAR-FGELKFDKDWENPICKLLEE  462 (465)
T ss_pred             HHHHcCHHHHHHHHHHHHHHHHH-hhHHHHHHhHhHHHHHhhcc
Confidence            99998788899999999988855 99999999999998888774

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.92  E-value=1.6e-23  Score=217.57  Aligned_cols=282  Identities=20%  Similarity=0.184  Sum_probs=199.8

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .=|+|.+|++.   ++..+....|.  +...+|..++.   .+++.-+   |   ....+          ++.+-.||.|
T Consensus       147 ~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs---~e~fr~l---p---~r~~i----------l~gll~aDli  207 (797)
T PLN03063        147 EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPS---SEIYKTL---P---SRSEL----------LRAVLTADLI  207 (797)
T ss_pred             CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCC---HHHHhhC---C---CHHHH----------HHHHhcCCEE
Confidence            45899999864   45555554443  66667765332   1111110   1   00111          1334578888


Q ss_pred             EEcChhhHHHHHHH----hcC-----------CCCcEEEecCCccCCCcCCCccc------chhhhhhhCCCCCCcEEEE
Q 011355          239 VATSDHCGDVLKRI----YMI-----------PEERVHVILNGVDEEVFKPDVAM------GKDFKKKFGIPENRSLVLG  297 (488)
Q Consensus       239 i~~S~~~~~~~~~~----~g~-----------~~~~i~vi~ngvd~~~~~~~~~~------~~~~r~~~~i~~~~~~~i~  297 (488)
                      -+.+....+.+.+.    .+.           ...++.++|||||.+.|.+....      ...++++++   ++ .+|+
T Consensus       208 gF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~-~lIl  283 (797)
T PLN03063        208 GFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFA---GR-KVIL  283 (797)
T ss_pred             EeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcC---CC-eEEE
Confidence            88887777766652    122           22578899999999877543221      123444443   44 6788


Q ss_pred             EEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEe-----CCCchhHHh----hhC----C--------cEEE-eCc
Q 011355          298 MAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-----DGPWGARYR----DLG----T--------NVIV-LGP  355 (488)
Q Consensus       298 ~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-----~g~~~~~~~----~l~----~--------~V~~-~g~  355 (488)
                      ++||+++.||++.+++|++.+.+++++++.++.|+.++     +++..+.++    ++.    .        .|++ .+.
T Consensus       284 ~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~  363 (797)
T PLN03063        284 GVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCS  363 (797)
T ss_pred             EecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCC
Confidence            99999999999999999999998883322234555443     233333332    221    1        1333 357


Q ss_pred             cCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCc----EEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHH
Q 011355          356 LDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP----LMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYG  430 (488)
Q Consensus       356 v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~P----VI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~  430 (488)
                      ++.+++..+|+.||++|.||.+ ||+|++++|||+||+|    +|.|+++|.. +.+  +.+|++++| |+++++++|.+
T Consensus       364 v~~~el~aly~~ADvfvvtSlr-EGmnLv~lEamA~g~p~~gvlVlSe~~G~~-~~l--~~~allVnP~D~~~lA~AI~~  439 (797)
T PLN03063        364 VDFNYLCALYAITDVMLVTSLR-DGMNLVSYEFVACQKAKKGVLVLSEFAGAG-QSL--GAGALLVNPWNITEVSSAIKE  439 (797)
T ss_pred             CCHHHHHHHHHhCCEEEeCccc-cccCcchhhHheeecCCCCCEEeeCCcCch-hhh--cCCeEEECCCCHHHHHHHHHH
Confidence            8999999999999999999986 9999999999999999    9999999987 443  567999999 99999999999


Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhcc
Q 011355          431 IWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISND  473 (488)
Q Consensus       431 ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~  473 (488)
                      +++.++++++++.++.++++.+ ++|...++.+.+-++++..+
T Consensus       440 aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~fl~~l~~~~~~  481 (797)
T PLN03063        440 ALNMSDEERETRHRHNFQYVKT-HSAQKWADDFMSELNDIIVE  481 (797)
T ss_pred             HHhCCHHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHHHhhh
Confidence            9996588888888999999966 79999999999988877653

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.92  E-value=2.3e-22  Score=191.61  Aligned_cols=282  Identities=14%  Similarity=0.069  Sum_probs=191.7

Q ss_pred             CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHHHhcCCCCC-cEEE
Q 011355           91 HAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPF-DVIH  169 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dvv~  169 (488)
                      ...|+...-.++.+.+.+.|+++.-+...+..                      .........++....... ++ |+||
T Consensus        13 ~~~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~-~~~Dvv~   69 (333)
T PRK09814         13 GNSAALKAKNDVTKIAKQLGFEELGIYFYNIK----------------------RDSLSERSKRLDGILASL-KPGDIVI   69 (333)
T ss_pred             ccchHHHHHHHHHHHHHHCCCeEeEEEecccc----------------------cchHHHHHHHHHHHHhcC-CCCCEEE
Confidence            44566677778899999999988665432100                      001111122222222222 55 9999


Q ss_pred             eCCcchHH---------h-hhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEE
Q 011355          170 TESVGLRH---------T-RARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHV  239 (488)
Q Consensus       170 ~~~~~~~~---------~-~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii  239 (488)
                      ++++....         . ...+.| ++..+|+.+......         .     ...      ...+..+++++|.++
T Consensus        70 ~~~P~~~~~~~~~~~~~~~k~~~~k-~i~~ihD~~~~~~~~---------~-----~~~------~~~~~~~~~~aD~iI  128 (333)
T PRK09814         70 FQFPTWNGFEFDRLFVDKLKKKQVK-IIILIHDIEPLRFDS---------N-----YYL------MKEEIDMLNLADVLI  128 (333)
T ss_pred             EECCCCchHHHHHHHHHHHHHcCCE-EEEEECCcHHHhccc---------c-----chh------hHHHHHHHHhCCEEE
Confidence            98753321         1 111356 999999975432100         0     011      111235678999999


Q ss_pred             EcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhH
Q 011355          240 ATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLL  319 (488)
Q Consensus       240 ~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~  319 (488)
                      ++|+.+++.+.+ .|++..++.++++..+........           .+..+ ..++|+|++...++    +      .
T Consensus       129 ~~S~~~~~~l~~-~g~~~~~i~~~~~~~~~~~~~~~~-----------~~~~~-~~i~yaG~l~k~~~----l------~  185 (333)
T PRK09814        129 VHSKKMKDRLVE-EGLTTDKIIVQGIFDYLNDIELVK-----------TPSFQ-KKINFAGNLEKSPF----L------K  185 (333)
T ss_pred             ECCHHHHHHHHH-cCCCcCceEecccccccccccccc-----------cccCC-ceEEEecChhhchH----H------H
Confidence            999999999988 688777888877655432111100           01223 57899999984332    1      1


Q ss_pred             hhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC----------CCCCChHHHHHH
Q 011355          320 AENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR----------AQGLDHTVLEAM  389 (488)
Q Consensus       320 ~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~----------~eg~~~~~lEAm  389 (488)
                      +..    ++++|+|+|+|+..+   ...++|+|.|+++.+++..+|+. |+.+.+...          .-++|.++.|+|
T Consensus       186 ~~~----~~~~l~i~G~g~~~~---~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ym  257 (333)
T PRK09814        186 NWS----QGIKLTVFGPNPEDL---ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYL  257 (333)
T ss_pred             hcC----CCCeEEEECCCcccc---ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHH
Confidence            123    689999999998654   45579999999999999999998 664443210          135799999999


Q ss_pred             HcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 011355          390 LSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLN  452 (488)
Q Consensus       390 a~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~  452 (488)
                      |||+|||+++.++.. +++.++++|++++ +.+++++++.++  + ++.+.+|++++++.+.+
T Consensus       258 A~G~PVI~~~~~~~~-~~V~~~~~G~~v~-~~~el~~~l~~~--~-~~~~~~m~~n~~~~~~~  315 (333)
T PRK09814        258 AAGLPVIVWSKAAIA-DFIVENGLGFVVD-SLEELPEIIDNI--T-EEEYQEMVENVKKISKL  315 (333)
T ss_pred             HCCCCEEECCCccHH-HHHHhCCceEEeC-CHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHH
Confidence            999999999999988 9999999999999 888999999985  2 57789999999998855

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.91  E-value=1.4e-22  Score=211.45  Aligned_cols=280  Identities=15%  Similarity=0.130  Sum_probs=195.7

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .-|+|.+|++.   ++..+....|.  +...+|-.++.   .+++.                .+.....-++.+-.+|.|
T Consensus       133 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~---~~~f~----------------~lp~~~~ll~~ll~~Dli  193 (726)
T PRK14501        133 PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS---FEVFR----------------LLPWREEILEGLLGADLI  193 (726)
T ss_pred             CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCC---hHHHh----------------hCCChHHHHHHHhcCCeE
Confidence            45999999864   45555544332  66677765432   11111                111111111344578888


Q ss_pred             EEcChhhHHHHHHHh----cC-----------CCCcEEEecCCccCCCcCCCccc------chhhhhhhCCCCCCcEEEE
Q 011355          239 VATSDHCGDVLKRIY----MI-----------PEERVHVILNGVDEEVFKPDVAM------GKDFKKKFGIPENRSLVLG  297 (488)
Q Consensus       239 i~~S~~~~~~~~~~~----g~-----------~~~~i~vi~ngvd~~~~~~~~~~------~~~~r~~~~i~~~~~~~i~  297 (488)
                      -..+....+.+.+..    +.           ...++.++|+|||.+.|.+....      ...+|+.+   +++ .+|+
T Consensus       194 gf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~-~~il  269 (726)
T PRK14501        194 GFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGR-KIIL  269 (726)
T ss_pred             EeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCC-EEEE
Confidence            888877666555421    21           12368899999999988654321      12244443   244 6888


Q ss_pred             EEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCC-----CchhHHh----hh----C---------CcEEEeCc
Q 011355          298 MAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDG-----PWGARYR----DL----G---------TNVIVLGP  355 (488)
Q Consensus       298 ~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g-----~~~~~~~----~l----~---------~~V~~~g~  355 (488)
                      ++||+++.||+..+++|+..+.+++++++.+++|+++|.+     +..+.++    ++    .         +.+.+.|.
T Consensus       270 ~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~  349 (726)
T PRK14501        270 SIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRS  349 (726)
T ss_pred             EecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCC
Confidence            9999999999999999999999888333335789888732     2222222    21    1         12457789


Q ss_pred             cCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC-----cEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHH
Q 011355          356 LDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK-----PLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALY  429 (488)
Q Consensus       356 v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~-----PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~  429 (488)
                      ++.+++..+|+.||++++||.+ ||||++++|||+||+     ||++...|+.. ++.    .|++++| |+++++++|.
T Consensus       350 ~~~~~l~~ly~~aDv~v~~S~~-EG~~lv~~Eama~~~~~~g~~vls~~~G~~~-~l~----~~llv~P~d~~~la~ai~  423 (726)
T PRK14501        350 LPFEELVALYRAADVALVTPLR-DGMNLVAKEYVASRTDGDGVLILSEMAGAAA-ELA----EALLVNPNDIEGIAAAIK  423 (726)
T ss_pred             CCHHHHHHHHHhccEEEecccc-cccCcccceEEEEcCCCCceEEEecccchhH-HhC----cCeEECCCCHHHHHHHHH
Confidence            9999999999999999999985 999999999999954     66666666665 543    4899999 9999999999


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhcc
Q 011355          430 GIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISND  473 (488)
Q Consensus       430 ~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~  473 (488)
                      ++++++.+++....+++++++. +|||+.+++++.+.|+++...
T Consensus       424 ~~l~~~~~e~~~r~~~~~~~v~-~~~~~~w~~~~l~~l~~~~~~  466 (726)
T PRK14501        424 RALEMPEEEQRERMQAMQERLR-RYDVHKWASDFLDELREAAEK  466 (726)
T ss_pred             HHHcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhh
Confidence            9999755666666678999985 599999999999999987654

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.90  E-value=5.4e-22  Score=192.43  Aligned_cols=343  Identities=13%  Similarity=0.095  Sum_probs=210.1

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCC----CCC-ceEEEecCCCCccCcchhHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCSFPT----YPI-SSLYFHLSKPTAAGYLDQSI  150 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~----~~~-~~i~~~~~~~~~~~~~~~~~  150 (488)
                      |||++++..=      .. -..+..++++|.+. +.++.++...........    .++ +.+.+...............
T Consensus         1 ~~i~~~~gtr------~~-~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   73 (365)
T TIGR00236         1 LKVSIVLGTR------PE-AIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSN   73 (365)
T ss_pred             CeEEEEEecC------HH-HHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHH
Confidence            7999998632      22 23567899999876 566666665432211000    122 22222222111111122233


Q ss_pred             HHHHHHHHhcCCCCCcEEEeCCcc------hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHH
Q 011355          151 VWQQLQTQNSTGKPFDVIHTESVG------LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASK  224 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~Dvv~~~~~~------~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (488)
                      ....+....++. +||+||+|+..      .......++| ++...++.....   ..    ...+     ....+.+. 
T Consensus        74 ~~~~l~~~l~~~-~pDiv~~~gd~~~~la~a~aa~~~~ip-v~h~~~g~~s~~---~~----~~~~-----~~~~r~~~-  138 (365)
T TIGR00236        74 MLEGLEELLLEE-KPDIVLVQGDTTTTLAGALAAFYLQIP-VGHVEAGLRTGD---RY----SPMP-----EEINRQLT-  138 (365)
T ss_pred             HHHHHHHHHHHc-CCCEEEEeCCchHHHHHHHHHHHhCCC-EEEEeCCCCcCC---CC----CCCc-----cHHHHHHH-
Confidence            334444444444 89999999631      2222334678 665444421100   00    0001     11111111 


Q ss_pred             HHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCc-cCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee-
Q 011355          225 VVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGV-DEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL-  302 (488)
Q Consensus       225 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl-  302 (488)
                             .+.+|.++++|+..++.+.+ .|++++++++++|++ |.............++++++.  +++++++..+|. 
T Consensus       139 -------~~~ad~~~~~s~~~~~~l~~-~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~--~~~~vl~~~hr~~  208 (365)
T TIGR00236       139 -------GHIADLHFAPTEQAKDNLLR-ENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGE--DKRYILLTLHRRE  208 (365)
T ss_pred             -------HHHHHhccCCCHHHHHHHHH-cCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCC--CCCEEEEecCchh
Confidence                   12367789999999999988 699999999999996 432222111123456667762  333555444454 


Q ss_pred             ccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc--hhHHhh---hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC
Q 011355          303 VKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW--GARYRD---LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       303 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~--~~~~~~---l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~  377 (488)
                      ...||++.+++|+.++.++.    |+++++++|.+..  .+.+.+   ..++|+|+|.++..++..+|+.||+++.+|  
T Consensus       209 ~~~k~~~~ll~a~~~l~~~~----~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S--  282 (365)
T TIGR00236       209 NVGEPLENIFKAIREIVEEF----EDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS--  282 (365)
T ss_pred             hhhhHHHHHHHHHHHHHHHC----CCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC--
Confidence            34589999999999998777    7889888764322  222222   236899999999999999999999999877  


Q ss_pred             CCCCChHHHHHHHcCCcEEEe-CCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCH
Q 011355          378 AQGLDHTVLEAMLSGKPLMAT-RLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTA  456 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~-~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~  456 (488)
                          |..++|||++|+|||++ +.++.. +.+..+ .+.+++.|++++++++.+++++ ++.+++|+++...+.. ..++
T Consensus       283 ----g~~~~EA~a~g~PvI~~~~~~~~~-e~~~~g-~~~lv~~d~~~i~~ai~~ll~~-~~~~~~~~~~~~~~g~-~~a~  354 (365)
T TIGR00236       283 ----GGVQEEAPSLGKPVLVLRDTTERP-ETVEAG-TNKLVGTDKENITKAAKRLLTD-PDEYKKMSNASNPYGD-GEAS  354 (365)
T ss_pred             ----hhHHHHHHHcCCCEEECCCCCCCh-HHHhcC-ceEEeCCCHHHHHHHHHHHHhC-hHHHHHhhhcCCCCcC-chHH
Confidence                33579999999999996 667766 666654 5666655999999999999998 8888888776533322 2345


Q ss_pred             HHHHHHHHH
Q 011355          457 TKMAAAYER  465 (488)
Q Consensus       457 ~~~~~~~~~  465 (488)
                      +++++.+.+
T Consensus       355 ~ri~~~l~~  363 (365)
T TIGR00236       355 ERIVEELLN  363 (365)
T ss_pred             HHHHHHHHh
Confidence            555554443

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.90  E-value=9.5e-22  Score=177.79  Aligned_cols=114  Identities=34%  Similarity=0.514  Sum_probs=99.6

Q ss_pred             EEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCcc-CHHHHHHHHHhcCE
Q 011355          298 MAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPL-DQTRLAMFYNAIDI  370 (488)
Q Consensus       298 ~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v-~~~~l~~~~~~adv  370 (488)
                      ++|++.+.||++.+++++..+.++.    ++++++++|.++.....+.      ..++|.+.|++ +.+++..+++.||+
T Consensus       109 ~~g~~~~~k~~~~~~~a~~~l~~~~----~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di  184 (229)
T cd01635         109 FVGRLAPEKGLDDLIEAFALLKERG----PDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADV  184 (229)
T ss_pred             EEEeecccCCHHHHHHHHHHHHHhC----CCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCE
Confidence            8999999999999999999999888    8999999999876654432      45799999998 45566666667999


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEe
Q 011355          371 FVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLF  417 (488)
Q Consensus       371 ~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~  417 (488)
                      ++.||. .|++|++++|||++|+|+|+++.++.. |.+.++++|+++
T Consensus       185 ~l~~~~-~e~~~~~~~Eam~~g~pvi~s~~~~~~-e~i~~~~~g~~~  229 (229)
T cd01635         185 FVLPSL-REGFGLVVLEAMACGLPVIATDVGGPP-EIVEDGLTGLLV  229 (229)
T ss_pred             EEeccc-ccCcChHHHHHHhCCCCEEEcCCCCcc-eEEECCCceEEC
Confidence            999997 589999999999999999999999988 888899999875

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.90  E-value=2e-22  Score=196.87  Aligned_cols=338  Identities=14%  Similarity=0.073  Sum_probs=207.7

Q ss_pred             ceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCC--CccCcchhHHH
Q 011355           76 LLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKP--TAAGYLDQSIV  151 (488)
Q Consensus        76 ~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~--~~~~~~~~~~~  151 (488)
                      .|||++...      ..||.-.-.. ++++|.+.++++.++...........  ...+...+.....  .....+.....
T Consensus         1 ~~ki~i~~G------gt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~   73 (380)
T PRK00025          1 PLRIAIVAG------EVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCESLFDMEELAVMGLVEVLPRLPRLLKI   73 (380)
T ss_pred             CceEEEEec------CcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCccccCHHHhhhccHHHHHHHHHHHHHH
Confidence            378988875      5677655555 99999998888888876542211110  1111111110000  00011122333


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCcc-hHH-----hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHH
Q 011355          152 WQQLQTQNSTGKPFDVIHTESVG-LRH-----TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKV  225 (488)
Q Consensus       152 ~~~~~~~~~~~~~~Dvv~~~~~~-~~~-----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      ...+.+..++. +||+||++++. ++.     ....++| ++...+...+        .    ..     .....     
T Consensus        74 ~~~~~~~l~~~-kPdivi~~~~~~~~~~~a~~a~~~~ip-~i~~~~~~~~--------~----~~-----~~~~~-----  129 (380)
T PRK00025         74 RRRLKRRLLAE-PPDVFIGIDAPDFNLRLEKKLRKAGIP-TIHYVSPSVW--------A----WR-----QGRAF-----  129 (380)
T ss_pred             HHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHHCCCC-EEEEeCCchh--------h----cC-----chHHH-----
Confidence            34444444444 89999987531 211     2224567 6654443100        0    00     01111     


Q ss_pred             HHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee-cc
Q 011355          226 VEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL-VK  304 (488)
Q Consensus       226 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl-~~  304 (488)
                          +..+.+|.+++.|+...+.+.+ +|++   +.+++|++.......  ..+...+++++++++++.++++.|+- ..
T Consensus       130 ----~~~~~~d~i~~~~~~~~~~~~~-~g~~---~~~~G~p~~~~~~~~--~~~~~~~~~l~~~~~~~~il~~~gsr~~~  199 (380)
T PRK00025        130 ----KIAKATDHVLALFPFEAAFYDK-LGVP---VTFVGHPLADAIPLL--PDRAAARARLGLDPDARVLALLPGSRGQE  199 (380)
T ss_pred             ----HHHHHHhhheeCCccCHHHHHh-cCCC---eEEECcCHHHhcccc--cChHHHHHHcCCCCCCCEEEEECCCCHHH
Confidence                1234568889999999998877 5643   677777764332111  12356788899987774455566643 33


Q ss_pred             c-cChHHHHHHHHHhHhhccCCCCCeEEEEEeC-CCchhHHhh----h-CCcEEEeCccCHHHHHHHHHhcCEEEeCCCC
Q 011355          305 D-KGHPLMFEALKQLLAENDTFRRSTVFLVAGD-GPWGARYRD----L-GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       305 ~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~-g~~~~~~~~----l-~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~  377 (488)
                      . ++++.+++++..+.++.    ++++++++|. ++..+.+++    . +.++.+.+    +++..+|+.||++|.+|  
T Consensus       200 ~~~~~~~l~~a~~~l~~~~----~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~aDl~v~~s--  269 (380)
T PRK00025        200 IKRLLPPFLKAAQLLQQRY----PDLRFVLPLVNPKRREQIEEALAEYAGLEVTLLD----GQKREAMAAADAALAAS--  269 (380)
T ss_pred             HHHHHHHHHHHHHHHHHhC----CCeEEEEecCChhhHHHHHHHHhhcCCCCeEEEc----ccHHHHHHhCCEEEECc--
Confidence            3 45788999999998877    8899999986 444444443    2 23455533    48999999999999976  


Q ss_pred             CCCCChHHHHHHHcCCcEEEe-----------------CCCCcccceeecCC--ceeEeCC-CHHHHHHHHHHHHhcCHH
Q 011355          378 AQGLDHTVLEAMLSGKPLMAT-----------------RLASIVGSVIVGTD--MGYLFSP-QVESVKKALYGIWADGRE  437 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~-----------------~~~~~~~e~v~~~~--~g~l~~~-d~~~la~~i~~ll~~~~~  437 (488)
                          |.+.+|||++|+|+|++                 +.++++ +++.++.  .+++.+. |++++++++.++++| ++
T Consensus       270 ----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~-~~  343 (380)
T PRK00025        270 ----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLP-NLLAGRELVPELLQEEATPEKLARALLPLLAD-GA  343 (380)
T ss_pred             ----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehH-HHhcCCCcchhhcCCCCCHHHHHHHHHHHhcC-HH
Confidence                56888999999999987                 444555 5555543  4566666 899999999999999 99


Q ss_pred             HHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhc
Q 011355          438 VLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       438 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~  472 (488)
                      .+++|++++.+.....  -...++++.+.+.+...
T Consensus       344 ~~~~~~~~~~~~~~~~--~~~a~~~~~~~i~~~~~  376 (380)
T PRK00025        344 RRQALLEGFTELHQQL--RCGADERAAQAVLELLK  376 (380)
T ss_pred             HHHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHhh
Confidence            9999999886655442  22244555555555544

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.89  E-value=1.2e-21  Score=190.29  Aligned_cols=318  Identities=15%  Similarity=0.103  Sum_probs=197.8

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCC--------CCCceEEEecCCCCccCcchh
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCSFPT--------YPISSLYFHLSKPTAAGYLDQ  148 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~  148 (488)
                      ||++++.      ...+. ..+..+.++|++. |+++.++.+.........        .....+...............
T Consensus         1 ~i~~~~g------tr~~~-~~~~pl~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   73 (363)
T cd03786           1 KILVVTG------TRPEY-IKLAPLIRALKKDPGFELVLVVTGQHYDMEMGVTFFEILFIIKPDYDLLLGSDSQSLGAQT   73 (363)
T ss_pred             CEEEEEe------cCHHH-HHHHHHHHHHhcCCCCCEEEEEeCCCCChhhhHHHHHhhCCCCCCEEEecCCCCCCHHHHH
Confidence            5788875      22332 3456899999987 899998777532221110        111222222222111111122


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEeCCcc---h---HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          149 SIVWQQLQTQNSTGKPFDVIHTESVG---L---RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Dvv~~~~~~---~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ......+....... +||+||+|+..   +   ......++| ++...|+.....         ...+.    .....  
T Consensus        74 ~~~~~~l~~~l~~~-~pDvV~~~g~~~~~~~~~~aa~~~~iP-vv~~~~g~~s~~---------~~~~~----~~~r~--  136 (363)
T cd03786          74 AGLLIGLEAVLLEE-KPDLVLVLGDTNETLAAALAAFKLGIP-VAHVEAGLRSFD---------RGMPD----EENRH--  136 (363)
T ss_pred             HHHHHHHHHHHHHh-CCCEEEEeCCchHHHHHHHHHHHcCCC-EEEEecccccCC---------CCCCc----hHHHH--
Confidence            22233333334444 89999999632   1   122234678 776655532100         00010    01001  


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCc-cCCCcCCCcccchhhhhhhCCCCCCcEEEEEEee
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGV-DEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR  301 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  301 (488)
                             ...+.+|.+++.|+..++.+.+ +|++++++.+++|++ |...+..........+++++++++. +++++.|+
T Consensus       137 -------~~~~~ad~~~~~s~~~~~~l~~-~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~vlv~~~r  207 (363)
T cd03786         137 -------AIDKLSDLHFAPTEEARRNLLQ-EGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKK-YILVTLHR  207 (363)
T ss_pred             -------HHHHHhhhccCCCHHHHHHHHH-cCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCC-EEEEEeCC
Confidence                   1223568889999999999987 799999999999985 5433222222122335567776544 77888898


Q ss_pred             ecc---ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh----h---CCcEEEeCccCHHHHHHHHHhcCEE
Q 011355          302 LVK---DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD----L---GTNVIVLGPLDQTRLAMFYNAIDIF  371 (488)
Q Consensus       302 l~~---~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~----l---~~~V~~~g~v~~~~l~~~~~~adv~  371 (488)
                      ...   .||++.+++++..+.+      .++.+++.|.++..+.+++    +   .++|.|.|..+.+++..+|+.||++
T Consensus       208 ~~~~~~~k~~~~l~~al~~l~~------~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~  281 (363)
T cd03786         208 VENVDDGEQLEEILEALAELAE------EDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLV  281 (363)
T ss_pred             ccccCChHHHHHHHHHHHHHHh------cCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEE
Confidence            764   7999999999998853      3467777777665554443    2   4789999988889999999999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEEeCCCC-cccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHH
Q 011355          372 VNPTLRAQGLDHTVLEAMLSGKPLMATRLAS-IVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKG  443 (488)
Q Consensus       372 v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~-~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~  443 (488)
                      |.+|.     | ...|||++|+|||+++..+ .+ +.+.+| .+..+..|+++++++|.+++++ +..+..|.
T Consensus       282 v~~Sg-----g-i~~Ea~~~g~PvI~~~~~~~~~-~~~~~g-~~~~~~~~~~~i~~~i~~ll~~-~~~~~~~~  345 (363)
T cd03786         282 LTDSG-----G-IQEEASFLGVPVLNLRDRTERP-ETVESG-TNVLVGTDPEAILAAIEKLLSD-EFAYSLMS  345 (363)
T ss_pred             EEcCc-----c-HHhhhhhcCCCEEeeCCCCccc-hhhhee-eEEecCCCHHHHHHHHHHHhcC-chhhhcCC
Confidence            99882     3 5799999999999987433 33 444333 3333333799999999999998 66665553

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.88  E-value=1.6e-20  Score=182.62  Aligned_cols=276  Identities=11%  Similarity=0.069  Sum_probs=201.9

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .-|+|.+|++.   ++..+....|+  +-..+|..++.   .+++.-+      +....+          ++.+-.+|.|
T Consensus       132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs---~eifr~L------P~r~~l----------l~glL~aDli  192 (487)
T TIGR02398       132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPS---ADVFNIL------PWREQI----------IGSLLCCDYI  192 (487)
T ss_pred             CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCC---hHHHhhC------CchHHH----------HHHHhcCCeE
Confidence            45899999864   45555554442  56666654332   1111110      111111          1334568888


Q ss_pred             EEcChhhHHHHHHHh----cCC--------------------------------CCcEEEecCCccCCCcCCCcc-----
Q 011355          239 VATSDHCGDVLKRIY----MIP--------------------------------EERVHVILNGVDEEVFKPDVA-----  277 (488)
Q Consensus       239 i~~S~~~~~~~~~~~----g~~--------------------------------~~~i~vi~ngvd~~~~~~~~~-----  277 (488)
                      =+.+...++.+.+..    |..                                .-++.++|.|||.+.|.....     
T Consensus       193 GFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~  272 (487)
T TIGR02398       193 GFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIR  272 (487)
T ss_pred             EeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHH
Confidence            888877776665522    211                                113789999999988754321     


Q ss_pred             -cchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC-----c----hhHHhhh-
Q 011355          278 -MGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP-----W----GARYRDL-  346 (488)
Q Consensus       278 -~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~-----~----~~~~~~l-  346 (488)
                       ....+|++++   ++ .+|+.++|++..||+...++|+.++.+++|+++.++.|+++|.+.     .    ..+++++ 
T Consensus       273 ~~~~~lr~~~~---~~-kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v  348 (487)
T TIGR02398       273 EMMERIRSELA---GV-KLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAV  348 (487)
T ss_pred             HHHHHHHHHcC---Cc-eEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHH
Confidence             1345788877   44 678899999999999999999999999996655678999998653     1    1222221 


Q ss_pred             ------------CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC----cEEEeCCCCcccceeec
Q 011355          347 ------------GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK----PLMATRLASIVGSVIVG  410 (488)
Q Consensus       347 ------------~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~----PVI~~~~~~~~~e~v~~  410 (488)
                                  .+-+.+.+.++.+++..+|+.||+++.+|.+ ||++++..|+++|+.    |+|.|.++|.. +.+  
T Consensus       349 ~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lr-DGmNLVa~Eyva~~~~~~GvLILSefaGaa-~~l--  424 (487)
T TIGR02398       349 GRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLR-DGLNLVAKEYVAAQGLLDGVLVLSEFAGAA-VEL--  424 (487)
T ss_pred             HHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccc-cccCcchhhHHhhhcCCCCCEEEeccccch-hhc--
Confidence                        1346788999999999999999999999997 999999999999998    99999999987 443  


Q ss_pred             CCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          411 TDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       411 ~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                       ..+++++| |++++|++|.+.++.+.+++++.-+..++++.+ ++....++.+.+-++
T Consensus       425 -~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~-~d~~~W~~~fl~~l~  481 (487)
T TIGR02398       425 -KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNY-YDVQRWADEFLAAVS  481 (487)
T ss_pred             -CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHhh
Confidence             45899999 999999999999999888888888888888866 799998888876543

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=1e-18  Score=168.75  Aligned_cols=221  Identities=29%  Similarity=0.461  Sum_probs=179.7

Q ss_pred             CccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCC-cEEEEEEeeeccccChHHHH
Q 011355          234 KYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENR-SLVLGMAGRLVKDKGHPLMF  312 (488)
Q Consensus       234 ~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~-~~~i~~~Grl~~~Kg~~~ll  312 (488)
                      ..+.+++.++...+.+... .. ..++.+++++++...+...         ..++..+. ...++++|++.+.||++.++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i  218 (381)
T COG0438         150 LADRVIAVSPALKELLEAL-GV-PNKIVVIPNGIDTEKFAPA---------RIGLLPEGGKFVVLYVGRLDPEKGLDLLI  218 (381)
T ss_pred             cccEEEECCHHHHHHHHHh-CC-CCCceEecCCcCHHHcCcc---------ccCCCcccCceEEEEeeccChhcCHHHHH
Confidence            5788899988886666663 32 3378999999998876542         01112222 26888999999999999999


Q ss_pred             HHHHHhHhhccCCCCCeEEEEEeCCCch-hH----Hhhh--CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHH
Q 011355          313 EALKQLLAENDTFRRSTVFLVAGDGPWG-AR----YRDL--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTV  385 (488)
Q Consensus       313 ~a~~~l~~~~~~~~~~~~l~ivG~g~~~-~~----~~~l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~  385 (488)
                      +++..+....    +++.++++|.++.. +.    .++.  .++|.+.|.++.+++..+++.||++++||.. |++|+++
T Consensus       219 ~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~-e~~~~~~  293 (381)
T COG0438         219 EAAAKLKKRG----PDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLS-EGFGLVL  293 (381)
T ss_pred             HHHHHhhhhc----CCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEecccc-ccchHHH
Confidence            9999998876    66999999998762 22    2222  3789999999988899999999999999975 9999999


Q ss_pred             HHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 011355          386 LEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYE  464 (488)
Q Consensus       386 lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~  464 (488)
                      +|||++|+|||+++.++.. +++.++..|+++++ +.+++++++..++++ .+.++.+++++++.+.+.|+|+..++.+.
T Consensus       294 ~Ea~a~g~pvi~~~~~~~~-e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (381)
T COG0438         294 LEAMAAGTPVIASDVGGIP-EVVEDGETGLLVPPGDVEELADALEQLLED-PELREELGEAARERVEEEFSWERIAEQLL  371 (381)
T ss_pred             HHHHhcCCcEEECCCCChH-HHhcCCCceEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            9999999999999999887 78877777887776 799999999999999 67788888867777767899999999999


Q ss_pred             HHHHHhhc
Q 011355          465 RLFLCISN  472 (488)
Q Consensus       465 ~~~~~~~~  472 (488)
                      +++.....
T Consensus       372 ~~~~~~~~  379 (381)
T COG0438         372 ELYEELLA  379 (381)
T ss_pred             HHHHHHHh
Confidence            99987755

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.84  E-value=1.6e-17  Score=147.27  Aligned_cols=362  Identities=16%  Similarity=0.164  Sum_probs=232.4

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCc--cCc----chh
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTA--AGY----LDQ  148 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~----~~~  148 (488)
                      ++-+++++.-    + ..| -+-++-.-|..|++.|++|+++....+.+.......+.++++......  ...    +..
T Consensus        11 ~k~ra~vvVL----G-DvG-RSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~~~~~~p~~~~l~   84 (444)
T KOG2941|consen   11 KKKRAIVVVL----G-DVG-RSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLNHPRIRIHGMPNLPFLQGGPRVLFLP   84 (444)
T ss_pred             ccceEEEEEe----c-ccC-CChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhcCCceEEEeCCCCcccCCCchhhhhH
Confidence            3446655553    1 233 344455677889999999999998876555444456666666432211  111    111


Q ss_pred             HHHHHHHHHH---hcCCCCCcEEEeCCc-chHHh-------hhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHH
Q 011355          149 SIVWQQLQTQ---NSTGKPFDVIHTESV-GLRHT-------RARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYA  217 (488)
Q Consensus       149 ~~~~~~~~~~---~~~~~~~Dvv~~~~~-~~~~~-------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (488)
                      .+.+.++..+   ......+|++.+.++ +++..       ...+.+ +++.+|++.|.     ....+......++ -.
T Consensus        85 lKvf~Qfl~Ll~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~K-fiIDWHNy~Ys-----l~l~~~~g~~h~l-V~  157 (444)
T KOG2941|consen   85 LKVFWQFLSLLWALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAK-FIIDWHNYGYS-----LQLKLKLGFQHPL-VR  157 (444)
T ss_pred             HHHHHHHHHHHHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcce-EEEEehhhHHH-----HHHHhhcCCCCch-HH
Confidence            1111111111   111228999999863 22221       112334 99999997653     1111112222222 13


Q ss_pred             HHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCcc-----CCC----cCC----------C-cc
Q 011355          218 LAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVD-----EEV----FKP----------D-VA  277 (488)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd-----~~~----~~~----------~-~~  277 (488)
                      +.+.+.+     .+-+.+|.-+|+++.+++.+.+.+|+.  +..|++.--.     .+.    |.+          . ++
T Consensus       158 l~~~~E~-----~fgk~a~~nLcVT~AMr~dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q  230 (444)
T KOG2941|consen  158 LVRWLEK-----YFGKLADYNLCVTKAMREDLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQ  230 (444)
T ss_pred             HHHHHHH-----HhhcccccchhhHHHHHHHHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccc
Confidence            3333333     345789999999999999999999974  4555554211     110    111          0 00


Q ss_pred             ----cchhhhhhhC-----CCCCCcEEEEEEeeeccccChHHHHHHHHHhH-----hhccCCCCCeEEEEEeCCCchhHH
Q 011355          278 ----MGKDFKKKFG-----IPENRSLVLGMAGRLVKDKGHPLMFEALKQLL-----AENDTFRRSTVFLVAGDGPWGARY  343 (488)
Q Consensus       278 ----~~~~~r~~~~-----i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~-----~~~~~~~~~~~l~ivG~g~~~~~~  343 (488)
                          ++..+-++..     ...+.+.+++...+..+..++..+++|+....     +.+.  .|++.++|.|+||.++.+
T Consensus       231 ~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~--lP~llciITGKGPlkE~Y  308 (444)
T KOG2941|consen  231 DKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHN--LPSLLCIITGKGPLKEKY  308 (444)
T ss_pred             cchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCC--CCcEEEEEcCCCchhHHH
Confidence                1122233322     11234467777778899999999999998442     2221  288999999999998877


Q ss_pred             hhh----C-CcEEE-eCccCHHHHHHHHHhcCEEEe--CCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCcee
Q 011355          344 RDL----G-TNVIV-LGPLDQTRLAMFYNAIDIFVN--PTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGY  415 (488)
Q Consensus       344 ~~l----~-~~V~~-~g~v~~~~l~~~~~~adv~v~--ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~  415 (488)
                      .+.    . .+|.+ +.++..|+.+.+++.||+.|.  .|..+-..|+++++...||+||++-++.-+. |+|.+++||+
T Consensus       309 ~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~-ELVkh~eNGl  387 (444)
T KOG2941|consen  309 SQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLD-ELVKHGENGL  387 (444)
T ss_pred             HHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHH-HHHhcCCCce
Confidence            652    1 34544 678899999999999999654  5544456799999999999999999999997 9999999999


Q ss_pred             EeCCCHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          416 LFSPQVESVKKALYGIWA----DGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       416 l~~~d~~~la~~i~~ll~----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      +|+ |.+++++.+..+.+    + .+.+.++.+++++..+  ..|+..-++.
T Consensus       388 vF~-Ds~eLa~ql~~lf~~fp~~-a~~l~~lkkn~~e~~e--~RW~~~W~~~  435 (444)
T KOG2941|consen  388 VFE-DSEELAEQLQMLFKNFPDN-ADELNQLKKNLREEQE--LRWDESWERT  435 (444)
T ss_pred             Eec-cHHHHHHHHHHHHhcCCCC-HHHHHHHHHhhHHHHh--hhHHHHHHHh
Confidence            999 99999999999999    5 8889999999998853  3566554443

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.81  E-value=1.9e-17  Score=171.25  Aligned_cols=281  Identities=20%  Similarity=0.172  Sum_probs=196.6

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .=|+|.+|++.   ++..+....|.  +-..+|..++.   .+++                +.+.....-++.+-.||.|
T Consensus       231 ~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs---~Eif----------------r~LP~r~elL~glL~aDlI  291 (934)
T PLN03064        231 EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPS---SEIH----------------RTLPSRSELLRSVLAADLV  291 (934)
T ss_pred             CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCC---hHHH----------------hhCCcHHHHHHHHhcCCeE
Confidence            45899999864   45555555443  56666764332   1111                1111111112344578999


Q ss_pred             EEcChhhHHHHHHH----hcCC-----------CCcEEEecCCccCCCcCCCcc------cchhhhhhhCCCCCCcEEEE
Q 011355          239 VATSDHCGDVLKRI----YMIP-----------EERVHVILNGVDEEVFKPDVA------MGKDFKKKFGIPENRSLVLG  297 (488)
Q Consensus       239 i~~S~~~~~~~~~~----~g~~-----------~~~i~vi~ngvd~~~~~~~~~------~~~~~r~~~~i~~~~~~~i~  297 (488)
                      =+.+....+.|.+.    +|..           .-++.+.|-|||.+.|.....      ....++++++   ++ .+|+
T Consensus       292 GFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~-kiIl  367 (934)
T PLN03064        292 GFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA---GR-KVML  367 (934)
T ss_pred             EeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---Cc-eEEE
Confidence            99988877777652    2221           113557788999987754322      1246777765   44 5788


Q ss_pred             EEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEe-----CCCchhHHh----hh--------C----CcEEEe-Cc
Q 011355          298 MAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-----DGPWGARYR----DL--------G----TNVIVL-GP  355 (488)
Q Consensus       298 ~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-----~g~~~~~~~----~l--------~----~~V~~~-g~  355 (488)
                      .++|++..||+...++||..+.+++++++.++.|+-+.     +++..+.++    ++        +    .-|+++ ..
T Consensus       368 gVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~  447 (934)
T PLN03064        368 GVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRS  447 (934)
T ss_pred             EeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccC
Confidence            99999999999999999999999985444445555332     333333322    11        1    114443 45


Q ss_pred             cCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC----cEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHH
Q 011355          356 LDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK----PLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYG  430 (488)
Q Consensus       356 v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~----PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~  430 (488)
                      ++.+++..+|+.||+++.||.+ ||++++..|||+|+.    ++|.|.+.|.. +.+  +..+++++| |+++++++|.+
T Consensus       448 l~~eeL~AlY~~ADV~lvTslr-DGmNLva~Eyva~~~~~~GvLILSEfaGaa-~~L--~~~AllVNP~D~~~vA~AI~~  523 (934)
T PLN03064        448 LDFHALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDSKKGVLILSEFAGAA-QSL--GAGAILVNPWNITEVAASIAQ  523 (934)
T ss_pred             CCHHHHHHHHHhCCEEEeCccc-cccCchHHHHHHhhcCCCCCeEEeCCCchH-HHh--CCceEEECCCCHHHHHHHHHH
Confidence            8999999999999999999996 999999999999954    44459998887 444  457899999 99999999999


Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhc
Q 011355          431 IWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       431 ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~  472 (488)
                      .++.++++++.+.++.++++.+ +|+...++.+.+-+.+...
T Consensus       524 AL~M~~~Er~~r~~~~~~~V~~-~d~~~Wa~~fl~~L~~~~~  564 (934)
T PLN03064        524 ALNMPEEEREKRHRHNFMHVTT-HTAQEWAETFVSELNDTVV  564 (934)
T ss_pred             HHhCCHHHHHHHHHHHHhhccc-CCHHHHHHHHHHHHHHHHh
Confidence            9996589999999999999966 7999999998877766543

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.80  E-value=3.9e-19  Score=146.60  Aligned_cols=131  Identities=27%  Similarity=0.437  Sum_probs=99.6

Q ss_pred             EEEEEEeeeccccChHHHHH-HHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh-CCcEEEeCccCHHHHHHHHHhcCEE
Q 011355          294 LVLGMAGRLVKDKGHPLMFE-ALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL-GTNVIVLGPLDQTRLAMFYNAIDIF  371 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~~~ll~-a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l-~~~V~~~g~v~~~~l~~~~~~adv~  371 (488)
                      +.++++|++.+.|+++.+++ ++.++.++.    |+++|+|+|.++.  +++++ .++|+++|++  +++.++++.||++
T Consensus         3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~----p~~~l~i~G~~~~--~l~~~~~~~v~~~g~~--~e~~~~l~~~dv~   74 (135)
T PF13692_consen    3 LYIGYLGRIRPDKGLEELIEAALERLKEKH----PDIELIIIGNGPD--ELKRLRRPNVRFHGFV--EELPEILAAADVG   74 (135)
T ss_dssp             EEEE--S-SSGGGTHHHHHH-HHHHHHHHS----TTEEEEEECESS---HHCCHHHCTEEEE-S---HHHHHHHHC-SEE
T ss_pred             ccccccccccccccccchhhhHHHHHHHHC----cCEEEEEEeCCHH--HHHHhcCCCEEEcCCH--HHHHHHHHhCCEE
Confidence            67899999999999999999 999999999    9999999999776  35555 6799999998  5899999999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhc
Q 011355          372 VNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWAD  434 (488)
Q Consensus       372 v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~  434 (488)
                      +.|+...++++.+++|||++|+|||+++. +.. +++...+.|.++..|+++++++|.++++|
T Consensus        75 l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~-~~~~~~~~~~~~~~~~~~l~~~i~~l~~d  135 (135)
T PF13692_consen   75 LIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAE-GIVEEDGCGVLVANDPEELAEAIERLLND  135 (135)
T ss_dssp             EE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCH-CHS---SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred             EEEeeCCCcCcHHHHHHHHhCCCEEECCc-chh-hheeecCCeEEECCCHHHHHHHHHHHhcC
Confidence            99986567999999999999999999998 444 55555667777744999999999999875

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.75  E-value=1.1e-16  Score=158.84  Aligned_cols=210  Identities=11%  Similarity=0.077  Sum_probs=167.0

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCC--CCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEe--eeccc
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIP--EERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG--RLVKD  305 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~--~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G--rl~~~  305 (488)
                      ..+.++|.+|+.|+...+.+.++++-.  ..++..||.+.- ... .            |.....+-.+++++  |+ ++
T Consensus       268 ~~~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~~-~------------~~s~r~~~~~I~v~idrL-~e  332 (519)
T TIGR03713       268 ESLSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RLR-L------------GQSQQLYETEIGFWIDGL-SD  332 (519)
T ss_pred             hChhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EEe-c------------ChhhcccceEEEEEcCCC-Ch
Confidence            345688999999988788787766411  134566775432 111 1            11112223566788  99 99


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch---hHHhh----h--C-----------------------------
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG---ARYRD----L--G-----------------------------  347 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~---~~~~~----l--~-----------------------------  347 (488)
                      |.++.+|+++.++.++.    |+++|.+.|.+.+.   +.+++    +  .                             
T Consensus       333 k~~~~~I~av~~~~~~~----p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (519)
T TIGR03713       333 EELQQILQQLLQYILKN----PDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEK  408 (519)
T ss_pred             HHHHHHHHHHHHHHhhC----CCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccc
Confidence            99999999999999999    99999999987543   22221    1  2                             


Q ss_pred             CcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHH
Q 011355          348 TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKA  427 (488)
Q Consensus       348 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~  427 (488)
                      ..|.|.|..+.+++...|..+.++|.+|. .|||+ +.+||++.|+|+|  +.|. . ++|.++.+|+++. |..+|+++
T Consensus       409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~-~eg~~-~~ieAiS~GiPqI--nyg~-~-~~V~d~~NG~li~-d~~~l~~a  481 (519)
T TIGR03713       409 ERIAFTTLTNEEDLISALDKLRLIIDLSK-EPDLY-TQISGISAGIPQI--NKVE-T-DYVEHNKNGYIID-DISELLKA  481 (519)
T ss_pred             cEEEEEecCCHHHHHHHHhhheEEEECCC-CCChH-HHHHHHHcCCCee--ecCC-c-eeeEcCCCcEEeC-CHHHHHHH
Confidence            58999999888899999999999999997 69999 9999999999999  4444 5 8999999999997 99999999


Q ss_pred             HHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          428 LYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       428 i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                      +..++.+ ++.+.++...+++.+.+ ||-+++.+++.+++
T Consensus       482 l~~~L~~-~~~wn~~~~~sy~~~~~-yS~~~i~~kW~~~~  519 (519)
T TIGR03713       482 LDYYLDN-LKNWNYSLAYSIKLIDD-YSSENIIERLNELI  519 (519)
T ss_pred             HHHHHhC-HHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhC
Confidence            9999999 99999999999999955 99999999987753

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.72  E-value=2.7e-15  Score=145.40  Aligned_cols=318  Identities=11%  Similarity=0.063  Sum_probs=184.7

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC--CC--CCCceEEEecCCCCccCcchhHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSF--PT--YPISSLYFHLSKPTAAGYLDQSIVWQ  153 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~~--~~~~~i~~~~~~~~~~~~~~~~~~~~  153 (488)
                      ||++.+.      ..||.-.-. .++++|.++|+++.++......-..  ..  .....+.+................+.
T Consensus         7 ki~i~aG------gtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~   79 (385)
T TIGR00215         7 TIALVAG------EASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSMEELSVMGLREVLGRLGRLLKIRK   79 (385)
T ss_pred             eEEEEeC------CccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCccccChHHhhhccHHHHHHHHHHHHHHHH
Confidence            6777664      556655555 9999999999999999876422111  00  11111111100000111222333344


Q ss_pred             HHHHHhcCCCCCcEEEeCCc-chH-----HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHH
Q 011355          154 QLQTQNSTGKPFDVIHTESV-GLR-----HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVE  227 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~~-~~~-----~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (488)
                      +..+..++. +||+|+..+. +++     .....++| +++  |.. +.     .+.    ++.     ...+.      
T Consensus        80 ~~~~~l~~~-kPd~vi~~g~~~~~~~~a~aa~~~gip-~v~--~i~-P~-----~wa----w~~-----~~~r~------  134 (385)
T TIGR00215        80 EVVQLAKQA-KPDLLVGIDAPDFNLTKELKKKDPGIK-IIY--YIS-PQ-----VWA----WRK-----WRAKK------  134 (385)
T ss_pred             HHHHHHHhc-CCCEEEEeCCCCccHHHHHHHhhCCCC-EEE--EeC-Cc-----Hhh----cCc-----chHHH------
Confidence            444445455 8999999863 222     22234566 553  321 10     000    000     00111      


Q ss_pred             HhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEe-eecc-c
Q 011355          228 EVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG-RLVK-D  305 (488)
Q Consensus       228 ~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G-rl~~-~  305 (488)
                         +.+.+|++++.++...+.+.+ +|+   ++.+++|++....... ...+...|++++++++++.+++..| |..+ .
T Consensus       135 ---l~~~~d~v~~~~~~e~~~~~~-~g~---~~~~vGnPv~~~~~~~-~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~  206 (385)
T TIGR00215       135 ---IEKATDFLLAILPFEKAFYQK-KNV---PCRFVGHPLLDAIPLY-KPDRKSAREKLGIDHNGETLALLPGSRGSEVE  206 (385)
T ss_pred             ---HHHHHhHhhccCCCcHHHHHh-cCC---CEEEECCchhhhcccc-CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHH
Confidence               124567779999999888876 443   5667888874332211 1123567888999887744444455 5555 6


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEe-CCCchhHHhh----h--CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAG-DGPWGARYRD----L--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-~g~~~~~~~~----l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                      |+++.+++++..+.++.    |++++++.+ .+...+.+++    +  ..+|.+.+.    ++..+|++||++|.+|   
T Consensus       207 k~~~~ll~a~~~l~~~~----p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~l~aADl~V~~S---  275 (385)
T TIGR00215       207 KLFPLFLKAAQLLEQQE----PDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG----DARKAMFAADAALLAS---  275 (385)
T ss_pred             HhHHHHHHHHHHHHHhC----CCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc----hHHHHHHhCCEEeecC---
Confidence            89999999999998888    889887654 4333333332    2  245655543    5668999999999988   


Q ss_pred             CCCChHHHHHHHcCCcEEEeC-CCCccc---------------ceeecCCce-eEeC-C-CHHHHHHHHHHHHhcCH---
Q 011355          379 QGLDHTVLEAMLSGKPLMATR-LASIVG---------------SVIVGTDMG-YLFS-P-QVESVKKALYGIWADGR---  436 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~-~~~~~~---------------e~v~~~~~g-~l~~-~-d~~~la~~i~~ll~~~~---  436 (488)
                         |.+.+|+|++|+|+|... ....+.               .++.+.+.. -+.. . +++.+++.+.++++| +   
T Consensus       276 ---Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~-~~~~  351 (385)
T TIGR00215       276 ---GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLEN-GLKA  351 (385)
T ss_pred             ---CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcC-Cccc
Confidence               456679999999998872 111110               122222211 1222 2 789999999999998 7   


Q ss_pred             -HHHHHHHHHHHHHH
Q 011355          437 -EVLEKKGLVARKRG  450 (488)
Q Consensus       437 -~~~~~~~~~a~~~~  450 (488)
                       +.++++.+...+..
T Consensus       352 ~~~~~~~~~~~~~~~  366 (385)
T TIGR00215       352 YKEMHRERQFFEELR  366 (385)
T ss_pred             HHHHHHHHHHHHHHH
Confidence             77777665554443

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.65  E-value=2.1e-13  Score=128.64  Aligned_cols=323  Identities=20%  Similarity=0.129  Sum_probs=185.3

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCe-EEEEecCCCCCCCCC--CCCceEEEecCCCCccCcc-------
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHE-LHIFTASCLNCSFPT--YPISSLYFHLSKPTAAGYL-------  146 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~-V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~-------  146 (488)
                      |+|++...      ..||.-.-+..++++|.++|++ |.++.....-.....  .......+..........+       
T Consensus         1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~   74 (357)
T COG0707           1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSLKLLKAPF   74 (357)
T ss_pred             CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEecccccceeeeccccCceEEEEecccccccCcHHHHHHHH
Confidence            45566554      6788888899999999999995 666644332222221  1222222222222111222       


Q ss_pred             hhHHHHHHHHHHhcCCCCCcEEEeCC--cchHHhh---hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHH
Q 011355          147 DQSIVWQQLQTQNSTGKPFDVIHTES--VGLRHTR---ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAER  221 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Dvv~~~~--~~~~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      .......+.+...++. +||+|+..+  ...+..+   ..++| ++....+..               +     ....+.
T Consensus        75 ~~~~~~~~a~~il~~~-kPd~vig~Ggyvs~P~~~Aa~~~~iP-v~ihEqn~~---------------~-----G~ank~  132 (357)
T COG0707          75 KLLKGVLQARKILKKL-KPDVVIGTGGYVSGPVGIAAKLLGIP-VIIHEQNAV---------------P-----GLANKI  132 (357)
T ss_pred             HHHHHHHHHHHHHHHc-CCCEEEecCCccccHHHHHHHhCCCC-EEEEecCCC---------------c-----chhHHH
Confidence            2222333334444444 999999964  2233332   23455 443333321               1     111122


Q ss_pred             HHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEee
Q 011355          222 ASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR  301 (488)
Q Consensus       222 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  301 (488)
                      ..+.         ++. ++.+...    .. -+.+++++.++.|++..+... .+.  ...+....  .+++.++++-|+
T Consensus       133 ~~~~---------a~~-V~~~f~~----~~-~~~~~~~~~~tG~Pvr~~~~~-~~~--~~~~~~~~--~~~~~ilV~GGS  192 (357)
T COG0707         133 LSKF---------AKK-VASAFPK----LE-AGVKPENVVVTGIPVRPEFEE-LPA--AEVRKDGR--LDKKTILVTGGS  192 (357)
T ss_pred             hHHh---------hce-eeecccc----cc-ccCCCCceEEecCcccHHhhc-cch--hhhhhhcc--CCCcEEEEECCc
Confidence            2222         222 3333222    11 345667899999999887665 222  12222211  144345555555


Q ss_pred             eccccChHHHHHHHHHhHhhccCCCCCeEE-EEEeCCCchhHHh---hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC
Q 011355          302 LVKDKGHPLMFEALKQLLAENDTFRRSTVF-LVAGDGPWGARYR---DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       302 l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l-~ivG~g~~~~~~~---~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~  377 (488)
                      ....+--+.+.++...+.+       ++++ +.+|.+...+...   ++.. +.+.++  .+++.++|++||++|.   +
T Consensus       193 ~Ga~~ln~~v~~~~~~l~~-------~~~v~~~~G~~~~~~~~~~~~~~~~-~~v~~f--~~dm~~~~~~ADLvIs---R  259 (357)
T COG0707         193 QGAKALNDLVPEALAKLAN-------RIQVIHQTGKNDLEELKSAYNELGV-VRVLPF--IDDMAALLAAADLVIS---R  259 (357)
T ss_pred             chhHHHHHHHHHHHHHhhh-------CeEEEEEcCcchHHHHHHHHhhcCc-EEEeeH--HhhHHHHHHhccEEEe---C
Confidence            5444433333344444432       3444 5566654222222   2333 899999  4599999999999997   4


Q ss_pred             CCCCChHHHHHHHcCCcEEEeCCCCccc-------ceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011355          378 AQGLDHTVLEAMLSGKPLMATRLASIVG-------SVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKKGLVAR  447 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~~~~~~~~-------e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~a~  447 (488)
                       .| ++++.|..++|+|+|.-..+...+       ..+++.+.|.+++.   +.+++.+.|.+++++ ++.++.|.++++
T Consensus       260 -aG-a~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~-~~~l~~m~~~a~  336 (357)
T COG0707         260 -AG-ALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSN-PEKLKAMAENAK  336 (357)
T ss_pred             -Cc-ccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcC-HHHHHHHHHHHH
Confidence             34 679999999999999987766521       24566677888886   488999999999999 999999999998


Q ss_pred             HHHhhhCCHHHHHHHHH
Q 011355          448 KRGLNLFTATKMAAAYE  464 (488)
Q Consensus       448 ~~~~~~fs~~~~~~~~~  464 (488)
                      +....+ ..+.+++..+
T Consensus       337 ~~~~p~-aa~~i~~~~~  352 (357)
T COG0707         337 KLGKPD-AAERIADLLL  352 (357)
T ss_pred             hcCCCC-HHHHHHHHHH
Confidence            877553 4444444443

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=99.64  E-value=5.5e-15  Score=127.80  Aligned_cols=173  Identities=26%  Similarity=0.412  Sum_probs=92.5

Q ss_pred             EEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHHH
Q 011355           79 IALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQ  158 (488)
Q Consensus        79 Il~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |+++...+   ...||+++++.+++++|+++||+|++++....+.....  .........................+...
T Consensus         1 ili~~~~~---~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (177)
T PF13439_consen    1 ILITNIFL---PNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE--LVKIFVKIPYPIRKRFLRSFFFMRRLRRL   75 (177)
T ss_dssp             -EEECC-T---TSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST--EEEE---TT-SSTSS--HHHHHHHHHHHH
T ss_pred             CEEEEecC---CCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh--ccceeeeeecccccccchhHHHHHHHHHH
Confidence            34555433   26899999999999999999999999988865554433  00111111111111222222233333334


Q ss_pred             hcCCCCCcEEEeCCcch---HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCc
Q 011355          159 NSTGKPFDVIHTESVGL---RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKY  235 (488)
Q Consensus       159 ~~~~~~~Dvv~~~~~~~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (488)
                      .++. +||+||+|....   ........| .+.+.|+....       ........... ..+.....+     ..++++
T Consensus        76 i~~~-~~DiVh~~~~~~~~~~~~~~~~~~-~v~~~H~~~~~-------~~~~~~~~~~~-~~~~~~~~~-----~~~~~~  140 (177)
T PF13439_consen   76 IKKE-KPDIVHIHGPPAFWIALLACRKVP-IVYTIHGPYFE-------RRFLKSKLSPY-SYLNFRIER-----KLYKKA  140 (177)
T ss_dssp             HHHH-T-SEEECCTTHCCCHHHHHHHCSC-EEEEE-HHH---------HHTTTTSCCCH-HHHHHCTTH-----HHHCCS
T ss_pred             HHHc-CCCeEEecccchhHHHHHhccCCC-EEEEeCCCccc-------ccccccccchh-hhhhhhhhh-----hHHhcC
Confidence            4333 899999997432   111112667 99999986432       00111111111 122222211     336899


Q ss_pred             cEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCc
Q 011355          236 AHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVF  272 (488)
Q Consensus       236 d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~  272 (488)
                      |.++++|+.+++.+.+ +|++++++.|||||+|.+.|
T Consensus       141 ~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F  176 (177)
T PF13439_consen  141 DRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRF  176 (177)
T ss_dssp             SEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH
T ss_pred             CEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHc
Confidence            9999999999999999 99999999999999999876

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.63  E-value=3.8e-13  Score=128.62  Aligned_cols=303  Identities=16%  Similarity=0.111  Sum_probs=170.1

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCCCccCcc-------h
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKPTAAGYL-------D  147 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~-------~  147 (488)
                      ||.++++.     ...||.-.-+..++++|.++||+|.+++....-.....  .+.+...+..........+       .
T Consensus         1 ~~~i~~~~-----GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~   75 (352)
T PRK12446          1 MKKIVFTG-----GGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFL   75 (352)
T ss_pred             CCeEEEEc-----CCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHH
Confidence            45455553     26788888899999999999999999987654332221  2333333332211100011       1


Q ss_pred             hHHHHHHHHHHhcCCCCCcEEEeCCcc-----hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          148 QSIVWQQLQTQNSTGKPFDVIHTESVG-----LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Dvv~~~~~~-----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ......+..++.++. +||+|+.+...     .......++|   ..+|.-..             .+     ...-+.+
T Consensus        76 ~~~~~~~~~~i~~~~-kPdvvi~~Ggy~s~p~~~aa~~~~~p---~~i~e~n~-------------~~-----g~~nr~~  133 (352)
T PRK12446         76 VMKGVMDAYVRIRKL-KPDVIFSKGGFVSVPVVIGGWLNRVP---VLLHESDM-------------TP-----GLANKIA  133 (352)
T ss_pred             HHHHHHHHHHHHHhc-CCCEEEecCchhhHHHHHHHHHcCCC---EEEECCCC-------------Cc-----cHHHHHH
Confidence            122222333334444 89999998632     2222333455   33443210             00     0111111


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                               .+.++.+.+.=+...    +  +++.+++.++++++..+.....   +...++.++++++++.++++-|+.
T Consensus       134 ---------~~~a~~v~~~f~~~~----~--~~~~~k~~~tG~Pvr~~~~~~~---~~~~~~~~~l~~~~~~iLv~GGS~  195 (352)
T PRK12446        134 ---------LRFASKIFVTFEEAA----K--HLPKEKVIYTGSPVREEVLKGN---REKGLAFLGFSRKKPVITIMGGSL  195 (352)
T ss_pred             ---------HHhhCEEEEEccchh----h--hCCCCCeEEECCcCCccccccc---chHHHHhcCCCCCCcEEEEECCcc
Confidence                     123444443222211    2  2355788999999977654221   345667788887775555555655


Q ss_pred             ccccCh-HHHHHHHHHhHhhccCCCCCeEE-EEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCC
Q 011355          303 VKDKGH-PLMFEALKQLLAENDTFRRSTVF-LVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQG  380 (488)
Q Consensus       303 ~~~Kg~-~~ll~a~~~l~~~~~~~~~~~~l-~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg  380 (488)
                      .. +.+ +.+.+++..+.       .++++ +++|.....+..... .++...+++ .+++.++|+.||++|.   + .|
T Consensus       196 Ga-~~in~~~~~~l~~l~-------~~~~vv~~~G~~~~~~~~~~~-~~~~~~~f~-~~~m~~~~~~adlvIs---r-~G  261 (352)
T PRK12446        196 GA-KKINETVREALPELL-------LKYQIVHLCGKGNLDDSLQNK-EGYRQFEYV-HGELPDILAITDFVIS---R-AG  261 (352)
T ss_pred             ch-HHHHHHHHHHHHhhc-------cCcEEEEEeCCchHHHHHhhc-CCcEEecch-hhhHHHHHHhCCEEEE---C-CC
Confidence            43 333 23334444442       23444 456755433323222 345556774 2589999999999997   3 23


Q ss_pred             CChHHHHHHHcCCcEEEeCCCCc----cc----ceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHH
Q 011355          381 LDHTVLEAMLSGKPLMATRLASI----VG----SVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLE  440 (488)
Q Consensus       381 ~~~~~lEAma~G~PVI~~~~~~~----~~----e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~  440 (488)
                       +.++.|++++|+|.|.......    .+    +.+.+.+.+..+..   +++.+.+++.++++| ++.++
T Consensus       262 -~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~-~~~~~  330 (352)
T PRK12446        262 -SNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHN-NEKYK  330 (352)
T ss_pred             -hhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcC-HHHHH
Confidence             6799999999999999865421    11    23445566666643   689999999999988 65543

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.63  E-value=1e-13  Score=139.46  Aligned_cols=233  Identities=16%  Similarity=0.194  Sum_probs=168.4

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcC-----C--CCcEEEecCCccCCCcCCCcc-------------------------
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMI-----P--EERVHVILNGVDEEVFKPDVA-------------------------  277 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~-----~--~~~i~vi~ngvd~~~~~~~~~-------------------------  277 (488)
                      -.+..+|.+.++|+...+..+..++.     +  ..++.-|-||||.....+...                         
T Consensus       258 lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~  337 (601)
T TIGR02094       258 LALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAI  337 (601)
T ss_pred             HHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhc
Confidence            34578899999999888744443321     1  234788889999875543210                         


Q ss_pred             ----------c----chhhhh----h-----------------hC--CCCCCcEEEEEEeeeccccChHHHHHHHHHhHh
Q 011355          278 ----------M----GKDFKK----K-----------------FG--IPENRSLVLGMAGRLVKDKGHPLMFEALKQLLA  320 (488)
Q Consensus       278 ----------~----~~~~r~----~-----------------~~--i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~  320 (488)
                                .    +..+.+    +                 +|  +.++. +.+++++|+..+||+++++.++..+.+
T Consensus       338 ~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~-~~ig~v~Rl~~yKr~dLil~~i~~l~~  416 (601)
T TIGR02094       338 DDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDV-LTIGFARRFATYKRADLIFRDLERLAR  416 (601)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCC-cEEEEEEcchhhhhHHHHHHHHHHHHH
Confidence                      0    111211    1                 11  23344 789999999999999999999888864


Q ss_pred             --hccCCCCCeEEEEEeCCCch--------hHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEe-CCCCCCCCCh
Q 011355          321 --ENDTFRRSTVFLVAGDGPWG--------ARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVN-PTLRAQGLDH  383 (488)
Q Consensus       321 --~~~~~~~~~~l~ivG~g~~~--------~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~-ps~~~eg~~~  383 (488)
                        ..++  .++++++.|++...        +.+.+      ..++|.|+...+.+--..+++.||++++ ||.-.|.+|+
T Consensus       417 i~~~~~--~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGt  494 (601)
T TIGR02094       417 ILNNPE--RPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGT  494 (601)
T ss_pred             HhhCCC--CCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchH
Confidence              2111  36899999987522        22222      2358888776666666788999999999 9972499999


Q ss_pred             HHHHHHHcCCcEEEeCCCCcccceeecCCceeEeC------------C-CHHHHHHHHHHHHh----cC-----HHHHHH
Q 011355          384 TVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFS------------P-QVESVKKALYGIWA----DG-----REVLEK  441 (488)
Q Consensus       384 ~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~------------~-d~~~la~~i~~ll~----~~-----~~~~~~  441 (488)
                      +-+=||..|.+.+++--|... |.. ++.+|+.+.            . |.++|-++|++.+.    +.     |..+.+
T Consensus       495 sqMka~~nGgL~~sv~DG~~~-E~~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~  572 (601)
T TIGR02094       495 SGMKAAMNGVLNLSILDGWWG-EGY-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVE  572 (601)
T ss_pred             HHHHHHHcCCceeecccCccc-ccC-CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHH
Confidence            999999999999999877766 444 678999998            4 89999999976551    21     345888


Q ss_pred             HHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          442 KGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       442 ~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                      |.+++.......|||+.++++|.++|
T Consensus       573 ~~k~am~~~~~~fsw~r~a~~Y~~~y  598 (601)
T TIGR02094       573 MMKESIATIAPRFSTNRMVREYVDKF  598 (601)
T ss_pred             HHHHHHhccCCCCCHHHHHHHHHHHh
Confidence            88888887666799999999999886

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=99.57  E-value=8.4e-13  Score=127.47  Aligned_cols=280  Identities=14%  Similarity=0.096  Sum_probs=196.4

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .-|+|.+|++.   ++..+....|.  +-..+|-.++.   .+++..+   |   ....+          ++.+-.+|.|
T Consensus       123 ~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs---~eifr~L---P---~r~ei----------l~glL~aDlI  183 (474)
T PRK10117        123 DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPT---PEIFNAL---P---PHDEL----------LEQLCDYDLL  183 (474)
T ss_pred             CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCC---hHHHhhC---C---ChHHH----------HHHHHhCccc
Confidence            45899999864   44555444332  66667764332   1111111   1   11111          1334467888


Q ss_pred             EEcChhhHHHHHHHh----cCC------------CCcEEEecCCccCCCcCCCc-----ccchhhhhhhCCCCCCcEEEE
Q 011355          239 VATSDHCGDVLKRIY----MIP------------EERVHVILNGVDEEVFKPDV-----AMGKDFKKKFGIPENRSLVLG  297 (488)
Q Consensus       239 i~~S~~~~~~~~~~~----g~~------------~~~i~vi~ngvd~~~~~~~~-----~~~~~~r~~~~i~~~~~~~i~  297 (488)
                      =+.+....+.+.+..    |..            .-++.+.|-|||.+.|....     .....++++++   ++ .+|+
T Consensus       184 GFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~---~~-~lil  259 (474)
T PRK10117        184 GFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELK---NV-QNIF  259 (474)
T ss_pred             eeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcC---CC-eEEE
Confidence            888887777666522    211            11356777789987664321     12245666654   34 4677


Q ss_pred             EEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC--c---hh----HHhhh--------C----CcEEEe-Cc
Q 011355          298 MAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP--W---GA----RYRDL--------G----TNVIVL-GP  355 (488)
Q Consensus       298 ~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~--~---~~----~~~~l--------~----~~V~~~-g~  355 (488)
                      -+.|++..||+..=++||+.+.+++|+++.++.|+-+....  .   .+    +++++        +    .-|.++ ..
T Consensus       260 gVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~  339 (474)
T PRK10117        260 SVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQH  339 (474)
T ss_pred             EecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCC
Confidence            89999999999999999999999998888888888665321  1   11    11111        1    125444 56


Q ss_pred             cCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC-----cEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHH
Q 011355          356 LDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK-----PLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALY  429 (488)
Q Consensus       356 v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~-----PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~  429 (488)
                      ++.+++..+|..||+++.++.+ +|+.++..|+.+|..     .+|.|.+.|.. +.+   ...++++| |.+++|++|.
T Consensus       340 ~~~~~l~alyr~ADv~lVTplR-DGMNLVAkEyva~q~~~~~GvLILSefAGaA-~~L---~~AllVNP~d~~~~A~Ai~  414 (474)
T PRK10117        340 FDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-NEL---TSALIVNPYDRDEVAAALD  414 (474)
T ss_pred             CCHHHHHHHHHhccEEEecccc-cccccccchheeeecCCCCccEEEecccchH-HHh---CCCeEECCCCHHHHHHHHH
Confidence            8999999999999999999987 999999999999976     38889999987 444   24799999 9999999999


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhc
Q 011355          430 GIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       430 ~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~  472 (488)
                      +.++.+++++++..+..++.+.+ ++....++.+.+-+.++..
T Consensus       415 ~AL~Mp~~Er~~R~~~l~~~v~~-~dv~~W~~~fL~~L~~~~~  456 (474)
T PRK10117        415 RALTMPLAERISRHAEMLDVIVK-NDINHWQECFISDLKQIVP  456 (474)
T ss_pred             HHHcCCHHHHHHHHHHHHHHhhh-CCHHHHHHHHHHHHHHhhh
Confidence            99999888888888888898866 6999999998887777644

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.57  E-value=2e-12  Score=126.74  Aligned_cols=278  Identities=18%  Similarity=0.204  Sum_probs=166.8

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .-|+|.+|++.   ++..+....|+  +...+|-.++.   .++    ++..  +....+          ++.+-.||.|
T Consensus       141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs---~e~----fr~l--P~r~ei----------L~glL~aDlI  201 (474)
T PF00982_consen  141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS---SEI----FRCL--PWREEI----------LRGLLGADLI  201 (474)
T ss_dssp             TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S-------HHH----HTTS--TTHHHH----------HHHHTTSSEE
T ss_pred             CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC---HHH----HhhC--CcHHHH----------HHHhhcCCEE
Confidence            67999999854   56666655443  56666764321   111    1111  111111          1345679999


Q ss_pred             EEcChhhHHHHHHH----hcCC--CC-----------cEEEecCCccCCCcCCC------cccchhhhhhhCCCCCCcEE
Q 011355          239 VATSDHCGDVLKRI----YMIP--EE-----------RVHVILNGVDEEVFKPD------VAMGKDFKKKFGIPENRSLV  295 (488)
Q Consensus       239 i~~S~~~~~~~~~~----~g~~--~~-----------~i~vi~ngvd~~~~~~~------~~~~~~~r~~~~i~~~~~~~  295 (488)
                      -+.+....+.+...    +|..  ..           ++.+.|-|||.+.+...      ......++++++  .+. .+
T Consensus       202 gFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~--~~~-~i  278 (474)
T PF00982_consen  202 GFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK--GKR-KI  278 (474)
T ss_dssp             EESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT--T-S-EE
T ss_pred             EEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC--CCc-EE
Confidence            99998888777553    2221  11           36677778888766432      112355777764  223 57


Q ss_pred             EEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC--ch-------hHHhh--------hC----CcEE-Ee
Q 011355          296 LGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP--WG-------ARYRD--------LG----TNVI-VL  353 (488)
Q Consensus       296 i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~--~~-------~~~~~--------l~----~~V~-~~  353 (488)
                      |+.+.|++..||+..=+.||.++.+++|+++.++.|+-++...  ..       +++.+        .+    .-|. +.
T Consensus       279 i~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~  358 (474)
T PF00982_consen  279 IVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIY  358 (474)
T ss_dssp             EEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-
T ss_pred             EEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEe
Confidence            7899999999999999999999999998888889988776421  11       11111        11    1244 45


Q ss_pred             CccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCc----EEEeCCCCcccceeecCCceeEeCC-CHHHHHHHH
Q 011355          354 GPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP----LMATRLASIVGSVIVGTDMGYLFSP-QVESVKKAL  428 (488)
Q Consensus       354 g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~P----VI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i  428 (488)
                      +.++.+++..+|+.||+++.+|.+ +|+.++..|+.+|..+    +|.|.+.|.. +.+  ++..++++| |.+++|++|
T Consensus       359 ~~~~~~~~~aly~~aDv~lvTslr-DGmNLva~Eyva~q~~~~GvLiLSefaGaa-~~L--~~~al~VNP~d~~~~A~ai  434 (474)
T PF00982_consen  359 RSLSFEELLALYRAADVALVTSLR-DGMNLVAKEYVACQDDNPGVLILSEFAGAA-EQL--SEAALLVNPWDIEEVADAI  434 (474)
T ss_dssp             S---HHHHHHHHHH-SEEEE--SS-BS--HHHHHHHHHS-TS--EEEEETTBGGG-GT---TTS-EEE-TT-HHHHHHHH
T ss_pred             cCCCHHHHHHHHHhhhhEEecchh-hccCCcceEEEEEecCCCCceEeeccCCHH-HHc--CCccEEECCCChHHHHHHH
Confidence            679999999999999999999987 9999999999999875    7888888877 444  224489999 999999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          429 YGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       429 ~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      .+.++.++++++..-+..++++.+ ++....++.+.+-++
T Consensus       435 ~~AL~M~~~Er~~r~~~~~~~v~~-~~~~~W~~~~l~~L~  473 (474)
T PF00982_consen  435 HEALTMPPEERKERHARLREYVRE-HDVQWWAESFLRDLK  473 (474)
T ss_dssp             HHHHT--HHHHHHHHHHHHHHHHH-T-HHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHHhHh-CCHHHHHHHHHHHhh
Confidence            999998788888888888898866 699998888876554

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.53  E-value=6.7e-13  Score=128.84  Aligned_cols=185  Identities=11%  Similarity=0.090  Sum_probs=138.3

Q ss_pred             CCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHH
Q 011355          233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMF  312 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll  312 (488)
                      .+.|.||+.++...+.+.++++ +..++.++|-|+-..   .....            ..+..+++++.       +..|
T Consensus       238 ~~~~~iIv~T~~q~~di~~r~~-~~~~~~~ip~g~i~~---~~~~~------------r~~~~~l~~t~-------s~~I  294 (438)
T TIGR02919       238 TRNKKIIIPNKNEYEKIKELLD-NEYQEQISQLGYLYP---FKKDN------------KYRKQALILTN-------SDQI  294 (438)
T ss_pred             cccCeEEeCCHHHHHHHHHHhC-cccCceEEEEEEEEe---ecccc------------CCcccEEEECC-------HHHH
Confidence            6889999999988888888775 356778888876521   11111            11123445551       8899


Q ss_pred             HHHHHhHhhccCCCCCeEEEEEeCCCc-hhHHhhhC--CcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHH
Q 011355          313 EALKQLLAENDTFRRSTVFLVAGDGPW-GARYRDLG--TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAM  389 (488)
Q Consensus       313 ~a~~~l~~~~~~~~~~~~l~ivG~g~~-~~~~~~l~--~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAm  389 (488)
                      ++++.+.++.    |+++|.| |.+.+ ...+.++.  +||+..+.+...++.++|..||+++..|. +|++++++.||+
T Consensus       295 ~~i~~Lv~~l----Pd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~-~e~~~~al~eA~  368 (438)
T TIGR02919       295 EHLEEIVQAL----PDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINH-GNEILNAVRRAF  368 (438)
T ss_pred             HHHHHHHHhC----CCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccc-cccHHHHHHHHH
Confidence            9999999999    9999999 76654 44444432  56655555556689999999999999996 699999999999


Q ss_pred             HcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011355          390 LSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRG  450 (488)
Q Consensus       390 a~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~  450 (488)
                      ..|+||++.+....+.+++.+   |.+++. ++++++++|.+++.+ ++.++..-..-++.+
T Consensus       369 ~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d-~~~~~~~~~~q~~~a  426 (438)
T TIGR02919       369 EYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLND-PNQFRELLEQQREHA  426 (438)
T ss_pred             HcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHh
Confidence            999999999877555455554   789998 999999999999999 766665544444444

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.52  E-value=8.3e-13  Score=128.01  Aligned_cols=244  Identities=18%  Similarity=0.167  Sum_probs=142.5

Q ss_pred             HHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCccc-------chh----hhh----hhCCC
Q 011355          225 VVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAM-------GKD----FKK----KFGIP  289 (488)
Q Consensus       225 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~-------~~~----~r~----~~~i~  289 (488)
                      ..-|......||.+.++|+-++......++-+++  .|+|||++.+.++...+-       ++.    ++.    .+++.
T Consensus       212 ~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pD--vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd  289 (633)
T PF05693_consen  212 HSIERAAAHYADVFTTVSEITAKEAEHLLKRKPD--VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFD  289 (633)
T ss_dssp             HHHHHHHHHHSSEEEESSHHHHHHHHHHHSS--S--EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-
T ss_pred             HHHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCC--EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCC
Confidence            3334455678999999999999998887764333  688999999877664321       111    121    23445


Q ss_pred             CCCcEEEEEEeeec-cccChHHHHHHHHHhHhhccCCCCC---eEEEEEeCCCc---h---------hHHhh--------
Q 011355          290 ENRSLVLGMAGRLV-KDKGHPLMFEALKQLLAENDTFRRS---TVFLVAGDGPW---G---------ARYRD--------  345 (488)
Q Consensus       290 ~~~~~~i~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~~~---~~l~ivG~g~~---~---------~~~~~--------  345 (488)
                      .++.+.|...||.+ ..||+|.+|+|+.+|......-..+   +-|+|+.....   -         +.+++        
T Consensus       290 ~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~  369 (633)
T PF05693_consen  290 LDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEK  369 (633)
T ss_dssp             GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHH
Confidence            55668888999997 5799999999999885421000022   33555543210   0         00000        


Q ss_pred             -----------------------------------------------------------------h----CC--cEEEeC
Q 011355          346 -----------------------------------------------------------------L----GT--NVIVLG  354 (488)
Q Consensus       346 -----------------------------------------------------------------l----~~--~V~~~g  354 (488)
                                                                                       +    .+  +|+|.+
T Consensus       370 ~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P  449 (633)
T PF05693_consen  370 IGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHP  449 (633)
T ss_dssp             HHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--
T ss_pred             HHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEee
Confidence                                                                             0    12  356654


Q ss_pred             -ccC------HHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceee-cCCceeEe-CC---
Q 011355          355 -PLD------QTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIV-GTDMGYLF-SP---  419 (488)
Q Consensus       355 -~v~------~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~-~~~~g~l~-~~---  419 (488)
                       +++      .-+..+++..||+.|+||++ |.+|.+.+|+.++|+|.|+|+..|.-.   +.+. ....|+.+ +-   
T Consensus       450 ~yL~~~dgif~l~Y~dfv~GcdLgvFPSYY-EPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~  528 (633)
T PF05693_consen  450 EYLSGTDGIFNLDYYDFVRGCDLGVFPSYY-EPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDK  528 (633)
T ss_dssp             S---TTSSSS-S-HHHHHHHSSEEEE--SS-BSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS
T ss_pred             ccccCCCCCCCCCHHHHhccCceeeecccc-ccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCC
Confidence             222      34678999999999999985 999999999999999999999887531   2222 22345444 32   


Q ss_pred             C----HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhc
Q 011355          420 Q----VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       420 d----~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~  472 (488)
                      +    ++++++.|.++...+...+..++.++.+.. +..+|+++...|.+.|+..+.
T Consensus       529 n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS-~~~dW~~~~~yY~~Ay~~AL~  584 (633)
T PF05693_consen  529 NYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLS-DLADWKNFGKYYEKAYDLALR  584 (633)
T ss_dssp             -HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHG-GGGBHHHHCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHH
Confidence            2    567777777777765667777777776655 558999999999998886554

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.50  E-value=1.2e-13  Score=105.13  Aligned_cols=91  Identities=19%  Similarity=0.242  Sum_probs=84.2

Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011355          370 IFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKR  449 (488)
Q Consensus       370 v~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~  449 (488)
                      +.++|+. ..+++.+++|+||||+|||+.+.++.. +++.++..++.++ |++++.+++..+++| ++.+++++++|++.
T Consensus         1 i~Ln~~~-~~~~~~r~~E~~a~G~~vi~~~~~~~~-~~~~~~~~~~~~~-~~~el~~~i~~ll~~-~~~~~~ia~~a~~~   76 (92)
T PF13524_consen    1 INLNPSR-SDGPNMRIFEAMACGTPVISDDSPGLR-EIFEDGEHIITYN-DPEELAEKIEYLLEN-PEERRRIAKNARER   76 (92)
T ss_pred             CEeeCCC-CCCCchHHHHHHHCCCeEEECChHHHH-HHcCCCCeEEEEC-CHHHHHHHHHHHHCC-HHHHHHHHHHHHHH
Confidence            3577886 489999999999999999999999988 7888888999999 999999999999999 99999999999999


Q ss_pred             HhhhCCHHHHHHHHH
Q 011355          450 GLNLFTATKMAAAYE  464 (488)
Q Consensus       450 ~~~~fs~~~~~~~~~  464 (488)
                      +.++|+|++.++++.
T Consensus        77 v~~~~t~~~~~~~il   91 (92)
T PF13524_consen   77 VLKRHTWEHRAEQIL   91 (92)
T ss_pred             HHHhCCHHHHHHHHH
Confidence            999999999998875

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.49  E-value=1.2e-11  Score=129.34  Aligned_cols=279  Identities=12%  Similarity=0.125  Sum_probs=196.1

Q ss_pred             cEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEE
Q 011355          166 DVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVA  240 (488)
Q Consensus       166 Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~  240 (488)
                      |+|.+|++.   ++.++....|.  +...+|..++.   .+++                +.+...-.-++.+-.||.|=+
T Consensus       203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs---~eif----------------r~LP~r~eiL~glL~aDlIGF  263 (854)
T PLN02205        203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS---SEIY----------------KTLPIREELLRALLNSDLIGF  263 (854)
T ss_pred             CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC---hHHH----------------hhCCcHHHHHHHHhcCCeEEe
Confidence            899999864   45666555443  66667764332   1111                111111111244567899999


Q ss_pred             cChhhHHHHHHH----hcCC---------------CCcEEEecCCccCCCcCCCc------ccchhhhhhhCCCCCCcEE
Q 011355          241 TSDHCGDVLKRI----YMIP---------------EERVHVILNGVDEEVFKPDV------AMGKDFKKKFGIPENRSLV  295 (488)
Q Consensus       241 ~S~~~~~~~~~~----~g~~---------------~~~i~vi~ngvd~~~~~~~~------~~~~~~r~~~~i~~~~~~~  295 (488)
                      .+...++.|.+.    .|+.               .-++.+.|-|||...+....      ....+++++++- +++ .+
T Consensus       264 ht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~  341 (854)
T PLN02205        264 HTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD-QDR-IM  341 (854)
T ss_pred             cCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc-CCC-EE
Confidence            988877777662    2321               11355777899987664321      123456666642 234 67


Q ss_pred             EEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCC-----CchhHHh----h--------hC----CcEEEe-
Q 011355          296 LGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDG-----PWGARYR----D--------LG----TNVIVL-  353 (488)
Q Consensus       296 i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g-----~~~~~~~----~--------l~----~~V~~~-  353 (488)
                      |+-+.|++..||+..=+.|++++.+++|+++.++.|+-+...     +..++++    +        .+    ..|+++ 
T Consensus       342 ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~  421 (854)
T PLN02205        342 LLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLID  421 (854)
T ss_pred             EEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEe
Confidence            889999999999999999999999999887778888866532     2222222    1        11    235555 


Q ss_pred             CccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC-------------------cEEEeCCCCcccceeecCCce
Q 011355          354 GPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK-------------------PLMATRLASIVGSVIVGTDMG  414 (488)
Q Consensus       354 g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~-------------------PVI~~~~~~~~~e~v~~~~~g  414 (488)
                      ..++.+++..+|+.||+++.++.+ +|+.++..|+.+|..                   .+|.|.+.|.. ..+   ...
T Consensus       422 ~~~~~~e~~aly~~ADv~lVT~lR-DGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa-~~L---~~A  496 (854)
T PLN02205        422 APLKFYERVAYYVVAECCLVTAVR-DGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCS-PSL---SGA  496 (854)
T ss_pred             cCCCHHHHHHHHHhccEEEecccc-ccccccchheeEEccCccccccccccccccCCCCceEeeeccchh-HHh---CcC
Confidence            678999999999999999999987 999999999999864                   37778888876 334   347


Q ss_pred             eEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Q 011355          415 YLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       415 ~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                      ++++| |.+++|++|.+.++.++++++..-++.++++.+ ++....++.+.+-++...
T Consensus       497 i~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~-~d~~~W~~~fl~~l~~~~  553 (854)
T PLN02205        497 IRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVST-HDVGYWARSFLQDLERTC  553 (854)
T ss_pred             eEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHH
Confidence            99999 999999999999998888888877888888866 699998888877666653

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=99.48  E-value=3.4e-11  Score=115.78  Aligned_cols=278  Identities=18%  Similarity=0.199  Sum_probs=197.5

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      +=|+|.+|++.   ++..+...+|.  +...+|-.++.   +                -+.+.+.....-++.+-.+|.|
T Consensus       147 ~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs---s----------------Evfr~lP~r~eIl~gll~~dli  207 (486)
T COG0380         147 PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS---S----------------EVFRCLPWREEILEGLLGADLI  207 (486)
T ss_pred             CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC---H----------------HHHhhCchHHHHHHHhhcCCee
Confidence            45999999864   45666666654  55556654332   1                1122222222222445678888


Q ss_pred             EEcChhhHHHHHHHhc-C----------------CCCcEEEecCCccCCCcCCCc------ccchhhhhhhCCCCCCcEE
Q 011355          239 VATSDHCGDVLKRIYM-I----------------PEERVHVILNGVDEEVFKPDV------AMGKDFKKKFGIPENRSLV  295 (488)
Q Consensus       239 i~~S~~~~~~~~~~~g-~----------------~~~~i~vi~ngvd~~~~~~~~------~~~~~~r~~~~i~~~~~~~  295 (488)
                      -..++..++.|.+... +                ...++...|-|+|...+....      ....++++.++  .++ .+
T Consensus       208 gFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~-ki  284 (486)
T COG0380         208 GFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--RNK-KL  284 (486)
T ss_pred             EecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc--CCc-eE
Confidence            8888888777665321 0                113566777899987765432      12345566654  224 56


Q ss_pred             EEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--hH---Hh----h--------hC----CcEEEe-
Q 011355          296 LGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--AR---YR----D--------LG----TNVIVL-  353 (488)
Q Consensus       296 i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--~~---~~----~--------l~----~~V~~~-  353 (488)
                      |+.+.|++.-||+..=+.||.++..++|+++.++.++-++.....  +.   ++    +        .+    .-|+++ 
T Consensus       285 ivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~  364 (486)
T COG0380         285 IVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLH  364 (486)
T ss_pred             EEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEe
Confidence            778999999999999999999999999888888888877753211  11   11    1        01    234444 


Q ss_pred             CccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC----cEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHH
Q 011355          354 GPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK----PLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKAL  428 (488)
Q Consensus       354 g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~----PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i  428 (488)
                      -.++.+++..+|..||+++..+++ +|+.++..|+.+|.-    |.|-|.+.|.. ..+.   ..++++| |.++++++|
T Consensus       365 ~~~~~~~l~al~~~aDv~lVtplr-DGMNLvakEyVa~q~~~~G~LiLSeFaGaa-~~L~---~AliVNP~d~~~va~ai  439 (486)
T COG0380         365 RDLDRNELLALYRAADVMLVTPLR-DGMNLVAKEYVAAQRDKPGVLILSEFAGAA-SELR---DALIVNPWDTKEVADAI  439 (486)
T ss_pred             ccCCHHHHHHHHhhhceeeecccc-ccccHHHHHHHHhhcCCCCcEEEeccccch-hhhc---cCEeECCCChHHHHHHH
Confidence            468999999999999999999987 999999999999854    88889988877 4443   3799999 999999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          429 YGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       429 ~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                      .+.++.+++++++.-+..++.+.+ ++....++.+.+-+.+
T Consensus       440 ~~AL~m~~eEr~~r~~~~~~~v~~-~d~~~W~~~fl~~la~  479 (486)
T COG0380         440 KRALTMSLEERKERHEKLLKQVLT-HDVARWANSFLDDLAQ  479 (486)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHh
Confidence            999999888888888888888876 6898888887766554

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=99.46  E-value=2.1e-10  Score=110.37  Aligned_cols=334  Identities=14%  Similarity=0.108  Sum_probs=186.0

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCC-----CC---CCC---ceEEEecCCCCccC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCSF-----PT---YPI---SSLYFHLSKPTAAG  144 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~-----~~---~~~---~~i~~~~~~~~~~~  144 (488)
                      |||++++..=      -. -.-+..++++|++. ++++.++.........     ..   .+.   +.+.+.........
T Consensus         1 ~ki~~v~GtR------pe-~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (365)
T TIGR03568         1 KKICVVTGTR------AD-YGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEKDGFDIDEKIEILLDSDSNAG   73 (365)
T ss_pred             CeEEEEEecC------hh-HHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHHcCCCCCCccccccCCCCCCC
Confidence            6899998632      22 23456889999875 7888888765432111     00   111   11222111110001


Q ss_pred             -cchhHHHHHHHHHHhcCCCCCcEEEeCCc------chHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHH
Q 011355          145 -YLDQSIVWQQLQTQNSTGKPFDVIHTESV------GLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYA  217 (488)
Q Consensus       145 -~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~------~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (488)
                       ..........+.....+. +||+|++++-      +.......++| ++..--+.....           .+.    ..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~-~Pd~vlv~GD~~~~la~alaA~~~~IP-v~HveaG~rs~~-----------~~e----E~  136 (365)
T TIGR03568        74 MAKSMGLTIIGFSDAFERL-KPDLVVVLGDRFEMLAAAIAAALLNIP-IAHIHGGEVTEG-----------AID----ES  136 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CCCEEEEeCCchHHHHHHHHHHHhCCc-EEEEECCccCCC-----------Cch----HH
Confidence             122233344444444444 8999999862      23333445667 543322211100           000    01


Q ss_pred             HHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecC-CccCCCcCCCcccchhhhhhhCCCCCCcEEE
Q 011355          218 LAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILN-GVDEEVFKPDVAMGKDFKKKFGIPENRSLVL  296 (488)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~n-gvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i  296 (488)
                      ....+.+         -++..++.++..++.+.+ -|.++.++.++.| ++|.-.... ......+.+++|++.++++++
T Consensus       137 ~r~~i~~---------la~l~f~~t~~~~~~L~~-eg~~~~~i~~tG~~~iD~l~~~~-~~~~~~~~~~lgl~~~~~~vl  205 (365)
T TIGR03568       137 IRHAITK---------LSHLHFVATEEYRQRVIQ-MGEDPDRVFNVGSPGLDNILSLD-LLSKEELEEKLGIDLDKPYAL  205 (365)
T ss_pred             HHHHHHH---------HHhhccCCCHHHHHHHHH-cCCCCCcEEEECCcHHHHHHhhh-ccCHHHHHHHhCCCCCCCEEE
Confidence            1111111         234457788888888887 7888889999988 555432211 123467788899875544655


Q ss_pred             EEEeeec--cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc----hhHHhhh---CCcEEEeCccCHHHHHHHHHh
Q 011355          297 GMAGRLV--KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW----GARYRDL---GTNVIVLGPLDQTRLAMFYNA  367 (488)
Q Consensus       297 ~~~Grl~--~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~----~~~~~~l---~~~V~~~g~v~~~~l~~~~~~  367 (488)
                      +.+-+-.  .....+.+.+.++.+.+..    .++.++.-..++.    .+.++++   .++|.+.+.++..++..+++.
T Consensus       206 vt~Hp~~~~~~~~~~~l~~li~~L~~~~----~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~  281 (365)
T TIGR03568       206 VTFHPVTLEKESAEEQIKELLKALDELN----KNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKN  281 (365)
T ss_pred             EEeCCCcccccCchHHHHHHHHHHHHhc----cCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHh
Confidence            5554432  3333344444444444333    3443322112221    2233332   368999999999999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVAR  447 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~  447 (488)
                      ||++|.-|.     | .+.||.++|+|||+-.  .-+ |.+..+.+++++..|++++.+++.+++ + ++.+..+     
T Consensus       282 a~~vitdSS-----g-gi~EA~~lg~Pvv~l~--~R~-e~~~~g~nvl~vg~~~~~I~~a~~~~~-~-~~~~~~~-----  345 (365)
T TIGR03568       282 ADAVIGNSS-----S-GIIEAPSFGVPTINIG--TRQ-KGRLRADSVIDVDPDKEEIVKAIEKLL-D-PAFKKSL-----  345 (365)
T ss_pred             CCEEEEcCh-----h-HHHhhhhcCCCEEeec--CCc-hhhhhcCeEEEeCCCHHHHHHHHHHHh-C-hHHHHHH-----
Confidence            999996541     2 2389999999999653  444 677778888878669999999999954 4 3332222     


Q ss_pred             HHHhhhCCHHHHHHHHHH
Q 011355          448 KRGLNLFTATKMAAAYER  465 (488)
Q Consensus       448 ~~~~~~fs~~~~~~~~~~  465 (488)
                      .....-|...+.++++.+
T Consensus       346 ~~~~~pygdg~as~rI~~  363 (365)
T TIGR03568       346 KNVKNPYGDGNSSERIIE  363 (365)
T ss_pred             hhCCCCCCCChHHHHHHH
Confidence            112233555555555544

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.42  E-value=4.6e-11  Score=113.80  Aligned_cols=292  Identities=19%  Similarity=0.155  Sum_probs=162.9

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceE-----EEecCCCCccC---cc--
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSL-----YFHLSKPTAAG---YL--  146 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~---~~--  146 (488)
                      |||++.+.+     ..-|.-.....++++|  +||+|++++.......... .....     ...........   ..  
T Consensus         1 MkIl~~v~~-----~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (318)
T PF13528_consen    1 MKILFYVQG-----HGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKP-RFPVREIPGLGPIQENGRLDRWKTVRNN   72 (318)
T ss_pred             CEEEEEeCC-----CCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcc-ccCEEEccCceEeccCCccchHHHHHHH
Confidence            899999973     4567777888999999  4899999998864322211 12221     11111111000   00  


Q ss_pred             -----hhHHHHHHHHHHhcCCCCCcEEEeCCcchH--HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHH
Q 011355          147 -----DQSIVWQQLQTQNSTGKPFDVIHTESVGLR--HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALA  219 (488)
Q Consensus       147 -----~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (488)
                           ................ +||+|++....+.  .....++| .+...|..+........       +   ....+.
T Consensus        73 ~~~~~~~~~~~~~~~~~l~~~-~pDlVIsD~~~~~~~aa~~~giP-~i~i~~~~~~~~~~~~~-------~---~~~~~~  140 (318)
T PF13528_consen   73 IRWLARLARRIRREIRWLREF-RPDLVISDFYPLAALAARRAGIP-VIVISNQYWFLHPNFWL-------P---WDQDFG  140 (318)
T ss_pred             HHhhHHHHHHHHHHHHHHHhc-CCCEEEEcChHHHHHHHHhcCCC-EEEEEehHHcccccCCc-------c---hhhhHH
Confidence                 0111222222333333 8999999864433  33445678 66655553322111100       0   001222


Q ss_pred             HHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEE
Q 011355          220 ERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMA  299 (488)
Q Consensus       220 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~  299 (488)
                      ..+.+...+. .+..++..+..+-... ..      +..++.+++..+........             +.+++.+++++
T Consensus       141 ~~~~~~~~~~-~~~~~~~~l~~~~~~~-~~------~~~~~~~~~p~~~~~~~~~~-------------~~~~~~iLv~~  199 (318)
T PF13528_consen  141 RLIERYIDRY-HFPPADRRLALSFYPP-LP------PFFRVPFVGPIIRPEIRELP-------------PEDEPKILVYF  199 (318)
T ss_pred             HHHHHhhhhc-cCCcccceecCCcccc-cc------ccccccccCchhcccccccC-------------CCCCCEEEEEe
Confidence            2223322211 2455555555553311 00      01122333333322211111             12333788899


Q ss_pred             eeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCC
Q 011355          300 GRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ  379 (488)
Q Consensus       300 Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~e  379 (488)
                      |..+..    .++++++.+        ++..++++|.+....    ..+||++.++. .+++.++++.||++|...    
T Consensus       200 gg~~~~----~~~~~l~~~--------~~~~~~v~g~~~~~~----~~~ni~~~~~~-~~~~~~~m~~ad~vIs~~----  258 (318)
T PF13528_consen  200 GGGGPG----DLIEALKAL--------PDYQFIVFGPNAADP----RPGNIHVRPFS-TPDFAELMAAADLVISKG----  258 (318)
T ss_pred             CCCcHH----HHHHHHHhC--------CCCeEEEEcCCcccc----cCCCEEEeecC-hHHHHHHHHhCCEEEECC----
Confidence            987555    567777665        778888888653111    26899999873 379999999999999733    


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCCcccc-----eeecCCceeEeCC---CHHHHHHHHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLASIVGS-----VIVGTDMGYLFSP---QVESVKKALYGI  431 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~~~~e-----~v~~~~~g~l~~~---d~~~la~~i~~l  431 (488)
                      |+ .++.||+++|+|+|.....+..|+     .+.+.+.|..++.   +.+.|++.|+++
T Consensus       259 G~-~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  259 GY-TTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             CH-HHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence            33 379999999999999988765532     3455667777653   678888888764

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=99.42  E-value=1.1e-12  Score=111.18  Aligned_cols=151  Identities=25%  Similarity=0.310  Sum_probs=78.5

Q ss_pred             CcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCCCccCcchhHHHHHHHHHHh--cCCCCCcEE
Q 011355           93 GGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKPTAAGYLDQSIVWQQLQTQN--STGKPFDVI  168 (488)
Q Consensus        93 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dvv  168 (488)
                      ||+++++.+++++|.++||+|++++..........  .+.....+......  ..+........+....  ... +||+|
T Consensus         1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~-~~Dvv   77 (160)
T PF13579_consen    1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRP--WPLRLLRFLRRLRRLLAARRE-RPDVV   77 (160)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SS--SGGGHCCHHHHHHHHCHHCT----SEE
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccc--hhhhhHHHHHHHHHHHhhhcc-CCeEE
Confidence            89999999999999999999999998765543321  22222222222211  1111111222333332  333 89999


Q ss_pred             EeCCcc---hHHhh--hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcCh
Q 011355          169 HTESVG---LRHTR--ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSD  243 (488)
Q Consensus       169 ~~~~~~---~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~  243 (488)
                      |+|+..   +..+.  ..++| ++.++|+.....             ...+...+...+.+     ..++++|.++++|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~-------------~~~~~~~~~~~~~~-----~~~~~ad~vi~~S~  138 (160)
T PF13579_consen   78 HAHSPTAGLVAALARRRRGIP-LVVTVHGTLFRR-------------GSRWKRRLYRWLER-----RLLRRADRVIVVSE  138 (160)
T ss_dssp             EEEHHHHHHHHHHHHHHHT---EEEE-SS-T-------------------HHHHHHHHHHH-----HHHHH-SEEEESSH
T ss_pred             EecccchhHHHHHHHHccCCc-EEEEECCCchhh-------------ccchhhHHHHHHHH-----HHHhcCCEEEECCH
Confidence            999742   11111  24567 999999843211             01111233333322     56788999999999


Q ss_pred             hhHHHHHHHhcCCCCcEEEecCC
Q 011355          244 HCGDVLKRIYMIPEERVHVILNG  266 (488)
Q Consensus       244 ~~~~~~~~~~g~~~~~i~vi~ng  266 (488)
                      ..++.+.+ +|++++++.|||||
T Consensus       139 ~~~~~l~~-~g~~~~ri~vipnG  160 (160)
T PF13579_consen  139 AMRRYLRR-YGVPPDRIHVIPNG  160 (160)
T ss_dssp             HHHHHHHH-H---GGGEEE----
T ss_pred             HHHHHHHH-hCCCCCcEEEeCcC
Confidence            99999999 89999999999997

>TIGR03492 conserved hypothetical protein

Probab=99.40  E-value=2.4e-10  Score=111.08  Aligned_cols=336  Identities=15%  Similarity=0.030  Sum_probs=182.8

Q ss_pred             CCCcHHHHHHHHHHHHHH--CCCeEE---EEecCCCCCCCCCCCC-ceEEEecCCCCccCcch----hHH-----HHHHH
Q 011355           91 HAGGLERHALTLHLALAK--RGHELH---IFTASCLNCSFPTYPI-SSLYFHLSKPTAAGYLD----QSI-----VWQQL  155 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L~~--~G~~V~---v~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~----~~~-----~~~~~  155 (488)
                      +..|.......++++|.+  .|++|.   ++.....-........ +...++...........    ...     .++++
T Consensus         5 nghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~~g~~~~~~sgg~~~~~~~~~~~~~~~gl~~~~~~~~   84 (396)
T TIGR03492         5 NGHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPIIGPTKELPSGGFSYQSLRGLLRDLRAGLVGLTLGQW   84 (396)
T ss_pred             CCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCceeCCCCCCCCCCccCCCHHHHHHHHHhhHHHHHHHHH
Confidence            446777889999999998  599999   6655543221111110 11111111100011111    111     12222


Q ss_pred             HHHhcCCCCCcEEEeCCcchHH--hhhccCCcEEEeeeCCcchh------hhhhhhHhhhcCCCChhHHHHHHHHHHHHH
Q 011355          156 QTQNSTGKPFDVIHTESVGLRH--TRARNLTNVVVSWHGIAYET------IHSDIIQELLRTPEEPQAYALAERASKVVE  227 (488)
Q Consensus       156 ~~~~~~~~~~Dvv~~~~~~~~~--~~~~~~p~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (488)
                      ....+..++||+|+...-..+.  ....++|-+++..|.-.+..      .+.+.+   .+.++..+..+ .  -.+   
T Consensus        85 ~~~~~~~~~p~~v~~~Gg~v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~---~~~~G~~~~p~-e--~n~---  155 (396)
T TIGR03492        85 RALRKWAKKGDLIVAVGDIVPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEY---HRLEGSLYLPW-E--RWL---  155 (396)
T ss_pred             HHHHHHhhcCCEEEEECcHHHHHHHHHcCCCceEEEeeccceeecCCCCCccchhh---hccCCCccCHH-H--HHH---
Confidence            2222222279999987633322  23345674555556532220      001111   11121111111 0  011   


Q ss_pred             HhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecc--c
Q 011355          228 EVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVK--D  305 (488)
Q Consensus       228 ~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~--~  305 (488)
                        -.-+.|+.+.+..+...+.+.+ .|+   ++.++.|++-........       .  +++++.+.+++..|+-..  .
T Consensus       156 --l~~~~a~~v~~~~~~t~~~l~~-~g~---k~~~vGnPv~d~l~~~~~-------~--~l~~~~~~lllLpGSR~ae~~  220 (396)
T TIGR03492       156 --MRSRRCLAVFVRDRLTARDLRR-QGV---RASYLGNPMMDGLEPPER-------K--PLLTGRFRIALLPGSRPPEAY  220 (396)
T ss_pred             --hhchhhCEEeCCCHHHHHHHHH-CCC---eEEEeCcCHHhcCccccc-------c--ccCCCCCEEEEECCCCHHHHH
Confidence              1225678888888888888876 554   789999987433221111       0  444555456666666533  3


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEe-CCCchhHHhh----hC----------------CcEEEeCccCHHHHHHH
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAG-DGPWGARYRD----LG----------------TNVIVLGPLDQTRLAMF  364 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-~g~~~~~~~~----l~----------------~~V~~~g~v~~~~l~~~  364 (488)
                      ++.+.+++++..+.++     +++.+++.- .+...+.+++    .+                +++.+..+  ..++.++
T Consensus       221 ~~lp~~l~al~~L~~~-----~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~  293 (396)
T TIGR03492       221 RNLKLLLRALEALPDS-----QPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG--RGAFAEI  293 (396)
T ss_pred             ccHHHHHHHHHHHhhC-----CCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEec--hHhHHHH
Confidence            6777999999998643     356665432 2333333322    11                12566666  5689999


Q ss_pred             HHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc--ceeecC----CceeEeCC-CHHHHHHHHHHHHhcCHH
Q 011355          365 YNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG--SVIVGT----DMGYLFSP-QVESVKKALYGIWADGRE  437 (488)
Q Consensus       365 ~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~--e~v~~~----~~g~l~~~-d~~~la~~i~~ll~~~~~  437 (488)
                      |+.||++|..|      |.+..|++++|+|+|....++...  .+....    +.+..+.. +.+.+++++.++++| ++
T Consensus       294 l~~ADlvI~rS------Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d-~~  366 (396)
T TIGR03492       294 LHWADLGIAMA------GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD-PE  366 (396)
T ss_pred             HHhCCEEEECc------CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC-HH
Confidence            99999999854      345599999999999987544310  111220    23344444 889999999999998 88


Q ss_pred             HHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 011355          438 VLEKKGLVARKRGLNLFTATKMAAAYE  464 (488)
Q Consensus       438 ~~~~~~~~a~~~~~~~fs~~~~~~~~~  464 (488)
                      .+++|.+++++...+....+.+++.+.
T Consensus       367 ~~~~~~~~~~~~lg~~~a~~~ia~~i~  393 (396)
T TIGR03492       367 LLERCRRNGQERMGPPGASARIAESIL  393 (396)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            888887655554434344555554443

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.39  E-value=7.7e-10  Score=102.35  Aligned_cols=348  Identities=17%  Similarity=0.145  Sum_probs=207.1

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCCCC-CCCC-----CCC--ceEEEecCCCCccCc
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRG-HELHIFTASCLNC-SFPT-----YPI--SSLYFHLSKPTAAGY  145 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~-~~~~-----~~~--~~i~~~~~~~~~~~~  145 (488)
                      .+|||++|...=|.       -.-+..+++++.+.+ .+..|+....... ....     .+.  +...+....+...-.
T Consensus         2 ~~~Kv~~I~GTRPE-------~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl~   74 (383)
T COG0381           2 KMLKVLTIFGTRPE-------AIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTLG   74 (383)
T ss_pred             CceEEEEEEecCHH-------HHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCHH
Confidence            57899999864332       345668999999886 7777776654321 1111     111  333333332211111


Q ss_pred             chhHHHHHHHHHHhcCCCCCcEEEeCC---cch---HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHH
Q 011355          146 LDQSIVWQQLQTQNSTGKPFDVIHTES---VGL---RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALA  219 (488)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~Dvv~~~~---~~~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (488)
                      -.....+..+.....+. +||+|.+|+   ..+   ......++| +...--|.......  ++.+.        .+.+.
T Consensus        75 ~~t~~~i~~~~~vl~~~-kPD~VlVhGDT~t~lA~alaa~~~~Ip-V~HvEAGlRt~~~~--~PEE~--------NR~l~  142 (383)
T COG0381          75 EITGNIIEGLSKVLEEE-KPDLVLVHGDTNTTLAGALAAFYLKIP-VGHVEAGLRTGDLY--FPEEI--------NRRLT  142 (383)
T ss_pred             HHHHHHHHHHHHHHHhh-CCCEEEEeCCcchHHHHHHHHHHhCCc-eEEEecccccCCCC--CcHHH--------HHHHH
Confidence            22233444444444444 999999995   222   233334567 55555453221100  11110        01222


Q ss_pred             HHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCc-cCCCcCCC-cccchhhhhh-hCCCCCCcEEE
Q 011355          220 ERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGV-DEEVFKPD-VAMGKDFKKK-FGIPENRSLVL  296 (488)
Q Consensus       220 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngv-d~~~~~~~-~~~~~~~r~~-~~i~~~~~~~i  296 (488)
                      ..            -+|..+++++..++.+.+ -|+++++++|++|.+ |.-..... .......... ++...++ +++
T Consensus       143 ~~------------~S~~hfapte~ar~nLl~-EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~-~iL  208 (383)
T COG0381         143 SH------------LSDLHFAPTEIARKNLLR-EGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKK-YIL  208 (383)
T ss_pred             HH------------hhhhhcCChHHHHHHHHH-cCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCc-EEE
Confidence            22            245569999999999998 799999999999965 33211111 1111122222 3333333 666


Q ss_pred             EEEeeeccc-cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC--chhH-HhhhC--CcEEEeCccCHHHHHHHHHhcCE
Q 011355          297 GMAGRLVKD-KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP--WGAR-YRDLG--TNVIVLGPLDQTRLAMFYNAIDI  370 (488)
Q Consensus       297 ~~~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~--~~~~-~~~l~--~~V~~~g~v~~~~l~~~~~~adv  370 (488)
                      +.+=|.... +++..+++++.++.+++    +++.++.--...  .++. .+.++  ++|+++..++..+...++..|.+
T Consensus       209 vT~HRreN~~~~~~~i~~al~~i~~~~----~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~  284 (383)
T COG0381         209 VTAHRRENVGEPLEEICEALREIAEEY----PDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL  284 (383)
T ss_pred             EEcchhhcccccHHHHHHHHHHHHHhC----CCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE
Confidence            666555433 88999999999999888    676655443221  1111 23344  56999999999999999999977


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011355          371 FVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRG  450 (488)
Q Consensus       371 ~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~  450 (488)
                      .+.=|      |...=||-..|+||++-+...-+.|.+ +.++-.++..+.+.+.+++..++++ ++.+++|+...-.+.
T Consensus       285 iltDS------GgiqEEAp~lg~Pvl~lR~~TERPE~v-~agt~~lvg~~~~~i~~~~~~ll~~-~~~~~~m~~~~npYg  356 (383)
T COG0381         285 ILTDS------GGIQEEAPSLGKPVLVLRDTTERPEGV-EAGTNILVGTDEENILDAATELLED-EEFYERMSNAKNPYG  356 (383)
T ss_pred             EEecC------CchhhhHHhcCCcEEeeccCCCCccce-ecCceEEeCccHHHHHHHHHHHhhC-hHHHHHHhcccCCCc
Confidence            77533      336789999999999976654443544 4455667776899999999999999 888888876544443


Q ss_pred             hhhCCHHHHHHHHHHHHH
Q 011355          451 LNLFTATKMAAAYERLFL  468 (488)
Q Consensus       451 ~~~fs~~~~~~~~~~~~~  468 (488)
                      ..+ +.+++++.+...+.
T Consensus       357 dg~-as~rIv~~l~~~~~  373 (383)
T COG0381         357 DGN-ASERIVEILLNYFD  373 (383)
T ss_pred             Ccc-hHHHHHHHHHHHhh
Confidence            332 44455544444443

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=99.38  E-value=1.6e-10  Score=110.50  Aligned_cols=335  Identities=16%  Similarity=0.188  Sum_probs=204.0

Q ss_pred             CCCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHH
Q 011355           73 PLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVW  152 (488)
Q Consensus        73 ~~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (488)
                      +.++.||+++++..    ....++.....+.+.+.+..+||..+..+.+........+..-..+....   +..+.....
T Consensus       256 ~~~rlRvGylS~dl----r~Havg~l~~~v~e~hDRdkfEvfay~~g~~~~dal~~rI~a~~~~~~~~---~~~dd~e~a  328 (620)
T COG3914         256 NGKRLRVGYLSSDL----RSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPHTDALQERISAAVEKWYPI---GRMDDAEIA  328 (620)
T ss_pred             cccceeEEEecccc----ccchHHHHHHHHHHHhchhheEEEEEecCCCCchhHHHHHHHhhhheecc---CCcCHHHHH
Confidence            45789999999854    55666777888888888777999988887333222211111100010100   112233333


Q ss_pred             HHHHHHhcCCCCCcEEEeCC-----cchHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHH
Q 011355          153 QQLQTQNSTGKPFDVIHTES-----VGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVE  227 (488)
Q Consensus       153 ~~~~~~~~~~~~~Dvv~~~~-----~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (488)
                      .++..   .  +.||.+--+     .....+..+..| +.+++-|.+.-..... ..                       
T Consensus       329 ~~I~~---d--~IdILvDl~g~T~d~r~~v~A~RpAP-iqvswlGy~aT~g~p~-~D-----------------------  378 (620)
T COG3914         329 NAIRT---D--GIDILVDLDGHTVDTRCQVFAHRPAP-IQVSWLGYPATTGSPN-MD-----------------------  378 (620)
T ss_pred             HHHHh---c--CCeEEEeccCceeccchhhhhcCCCc-eEEeecccccccCCCc-ce-----------------------
Confidence            33222   2  789887532     223333344457 8888877543221000 00                       


Q ss_pred             HhhhcCCccEEEEcChhhHHHHHHHh-cCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecccc
Q 011355          228 EVKFFPKYAHHVATSDHCGDVLKRIY-MIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK  306 (488)
Q Consensus       228 ~~~~~~~~d~ii~~S~~~~~~~~~~~-g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~K  306 (488)
                          +--+|..+.+ +....++.+.. .+|     -++-++|-  +.+...  .--|..+|+|++. ++++++++  ..|
T Consensus       379 ----Y~I~D~y~vP-p~ae~yysEkl~RLp-----~cy~p~d~--~~~v~p--~~sR~~lglp~~a-vVf~c~~n--~~K  441 (620)
T COG3914         379 ----YFISDPYTVP-PTAEEYYSEKLWRLP-----QCYQPVDG--FEPVTP--PPSRAQLGLPEDA-VVFCCFNN--YFK  441 (620)
T ss_pred             ----EEeeCceecC-chHHHHHHHHHHhcc-----cccCCCCC--cccCCC--CcchhhcCCCCCe-EEEEecCC--ccc
Confidence                0012222333 55555555432 222     22334432  222111  2347889999988 77766664  577


Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchh---HHhhh-------CCcEEEeCccCHHHHHHHHHhcCEEEeCCC
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGA---RYRDL-------GTNVIVLGPLDQTRLAMFYNAIDIFVNPTL  376 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~---~~~~l-------~~~V~~~g~v~~~~l~~~~~~adv~v~ps~  376 (488)
                      -.+.+++.+.++.+..    |+-.|++.|.|+..+   .++++       .++..|.+..+.++..+.|.-||+++-+.-
T Consensus       442 ~~pev~~~wmqIL~~v----P~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyP  517 (620)
T COG3914         442 ITPEVFALWMQILSAV----PNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYP  517 (620)
T ss_pred             CCHHHHHHHHHHHHhC----CCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeeccc
Confidence            7888999999999998    999999998875443   23332       278999999999999999999999998663


Q ss_pred             CCCCCChHHHHHHHcCCcEEEe-------CCCCcccceeec-CCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011355          377 RAQGLDHTVLEAMLSGKPLMAT-------RLASIVGSVIVG-TDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARK  448 (488)
Q Consensus       377 ~~eg~~~~~lEAma~G~PVI~~-------~~~~~~~e~v~~-~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~  448 (488)
                        -|-..+.+||+.+|+|||+-       +.|+   .++.. |..-+++. +.++..+.-..+-.| ...+++.+..-.+
T Consensus       518 --Y~g~TTa~daLwm~vPVlT~~G~~FasR~~~---si~~~agi~e~vA~-s~~dYV~~av~~g~d-ral~q~~r~~l~~  590 (620)
T COG3914         518 --YGGHTTASDALWMGVPVLTRVGEQFASRNGA---SIATNAGIPELVAD-SRADYVEKAVAFGSD-RALRQQVRAELKR  590 (620)
T ss_pred             --CCCccchHHHHHhcCceeeeccHHHHHhhhH---HHHHhcCCchhhcC-CHHHHHHHHHHhccc-HHHHHhhHHHHHh
Confidence              45578999999999999974       2222   12222 23333444 677777777776666 5555555544443


Q ss_pred             HHhh--hCCHHHHHHHHHHHHHHhhc
Q 011355          449 RGLN--LFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       449 ~~~~--~fs~~~~~~~~~~~~~~~~~  472 (488)
                      ....  -|+.+.++++++.+|.++-+
T Consensus       591 ~r~tspL~d~~~far~le~~y~~M~~  616 (620)
T COG3914         591 SRQTSPLFDPKAFARKLETLYWGMWS  616 (620)
T ss_pred             ccccCcccCHHHHHHHHHHHHHHHHH
Confidence            3333  58999999999999998866

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.36  E-value=1.9e-10  Score=113.32  Aligned_cols=152  Identities=20%  Similarity=0.196  Sum_probs=95.5

Q ss_pred             CCCcEEEEEEeeecc---ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHH
Q 011355          290 ENRSLVLGMAGRLVK---DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYN  366 (488)
Q Consensus       290 ~~~~~~i~~~Grl~~---~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~  366 (488)
                      ++++.+++..|+...   .+....+++++..+        +.-.++.+|......  ..+.+||.+.++++..   .++.
T Consensus       237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~--------~~~~i~~~g~~~~~~--~~~~~~v~~~~~~p~~---~ll~  303 (401)
T cd03784         237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL--------GQRAILSLGWGGLGA--EDLPDNVRVVDFVPHD---WLLP  303 (401)
T ss_pred             CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc--------CCeEEEEccCccccc--cCCCCceEEeCCCCHH---HHhh
Confidence            345577788888754   23334444554433        233345566544322  3456899999998755   5588


Q ss_pred             hcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCc----ccceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHH
Q 011355          367 AIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASI----VGSVIVGTDMGYLFSP---QVESVKKALYGIWADGREVL  439 (488)
Q Consensus       367 ~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~----~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~  439 (488)
                      .||++|.   + .| ..++.||+++|+|+|.....+-    . +.+.+.+.|..++.   +.+++.+++.+++++ + .+
T Consensus       304 ~~d~~I~---h-gG-~~t~~eal~~GvP~v~~P~~~dQ~~~a-~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~-~-~~  375 (401)
T cd03784         304 RCAAVVH---H-GG-AGTTAAALRAGVPQLVVPFFGDQPFWA-ARVAELGAGPALDPRELTAERLAAALRRLLDP-P-SR  375 (401)
T ss_pred             hhheeee---c-CC-chhHHHHHHcCCCEEeeCCCCCcHHHH-HHHHHCCCCCCCCcccCCHHHHHHHHHHHhCH-H-HH
Confidence            8999995   2 34 4699999999999999876552    2 34555667777764   689999999999985 3 34


Q ss_pred             HHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          440 EKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       440 ~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      ++..+.+.+.. +.-..+..++.+
T Consensus       376 ~~~~~~~~~~~-~~~g~~~~~~~i  398 (401)
T cd03784         376 RRAAALLRRIR-EEDGVPSAADVI  398 (401)
T ss_pred             HHHHHHHHHHH-hccCHHHHHHHH
Confidence            44433333332 222444444433

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=99.32  E-value=6.7e-10  Score=114.18  Aligned_cols=172  Identities=16%  Similarity=0.166  Sum_probs=130.7

Q ss_pred             EEEEEEeeeccccChHHHHHHHHHhHhhc--cCCCCCeEEEEEeCCCch-----h---HHhhh------CCcEEEeCccC
Q 011355          294 LVLGMAGRLVKDKGHPLMFEALKQLLAEN--DTFRRSTVFLVAGDGPWG-----A---RYRDL------GTNVIVLGPLD  357 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~--~~~~~~~~l~ivG~g~~~-----~---~~~~l------~~~V~~~g~v~  357 (488)
                      +++++++|+..+|+.++++..+..+.+-.  ++  .+++++++|++...     +   .+.++      ..+|.|+...+
T Consensus       479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd  556 (778)
T cd04299         479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYD  556 (778)
T ss_pred             cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCC
Confidence            78999999999999999999988775411  01  35999999985411     1   12222      35888887776


Q ss_pred             HHHHHHHHHhcCEEEeCCCC-CCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-------------CHHH
Q 011355          358 QTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-------------QVES  423 (488)
Q Consensus       358 ~~~l~~~~~~adv~v~ps~~-~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-------------d~~~  423 (488)
                      .+--..+++.||++++||++ -|.+|+.-+=||..|.+-+++--|... |.. ++.+|+.+.+             |.++
T Consensus       557 ~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~-E~~-~g~nGwaig~~~~~~~~~~~d~~da~~  634 (778)
T cd04299         557 MALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWD-EGY-DGENGWAIGDGDEYEDDEYQDAEEAEA  634 (778)
T ss_pred             HHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCccc-ccc-CCCCceEeCCCccccChhhcchhhHHH
Confidence            66677889999999999971 389999999999999999999888877 554 7899999975             2445


Q ss_pred             HHHHHHHHHh----c-----CHHHHHHHHHHHHHHHhhhCCHHHHHHHHHH-HHHH
Q 011355          424 VKKALYGIWA----D-----GREVLEKKGLVARKRGLNLFTATKMAAAYER-LFLC  469 (488)
Q Consensus       424 la~~i~~ll~----~-----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~-~~~~  469 (488)
                      |-+.|++-+.    +     .|..+.+|.+++...+...|||+.++++|.+ +|..
T Consensus       635 Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p  690 (778)
T cd04299         635 LYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLP  690 (778)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHH
Confidence            5566644222    2     1567888999998888889999999999876 4543

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.29  E-value=3.1e-09  Score=104.25  Aligned_cols=161  Identities=20%  Similarity=0.257  Sum_probs=103.7

Q ss_pred             CCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCE
Q 011355          291 NRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDI  370 (488)
Q Consensus       291 ~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv  370 (488)
                      +++.+++..|+....+. . +++.+.+...+.    +.-.++.+|.+...+.++++.++|.+.+++++.   +++..||+
T Consensus       224 ~~~~v~vs~Gs~~~~~~-~-~~~~~~~al~~~----~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~~---~ll~~~~~  294 (392)
T TIGR01426       224 GRPVVLISLGTVFNNQP-S-FYRTCVEAFRDL----DWHVVLSVGRGVDPADLGELPPNVEVRQWVPQL---EILKKADA  294 (392)
T ss_pred             CCCEEEEecCccCCCCH-H-HHHHHHHHHhcC----CCeEEEEECCCCChhHhccCCCCeEEeCCCCHH---HHHhhCCE
Confidence            45577888888643332 2 343333233222    333345567665555566677899999999864   67899999


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHHHH
Q 011355          371 FVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKKGL  444 (488)
Q Consensus       371 ~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~  444 (488)
                      +|..+    | ..++.||+++|+|+|+....+-..   +.+.+.+.|..+..   +.++++++|.+++++ ++.++++.+
T Consensus       295 ~I~hg----G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~-~~~~~~~~~  368 (392)
T TIGR01426       295 FITHG----G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSD-PRYAERLRK  368 (392)
T ss_pred             EEECC----C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcC-HHHHHHHHH
Confidence            99733    3 248999999999999976544221   23445567777663   689999999999998 665554433


Q ss_pred             HHHHHHhhhCCHHHHHHHHHHHH
Q 011355          445 VARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       445 ~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                       ..+.+...-..+..++.+++++
T Consensus       369 -l~~~~~~~~~~~~aa~~i~~~~  390 (392)
T TIGR01426       369 -MRAEIREAGGARRAADEIEGFL  390 (392)
T ss_pred             -HHHHHHHcCCHHHHHHHHHHhh
Confidence             3333334446777776666554

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=99.20  E-value=1.1e-09  Score=104.35  Aligned_cols=212  Identities=16%  Similarity=0.173  Sum_probs=120.6

Q ss_pred             CccEEEEcChhhHHHHHHHhcCCCCcEEEecC-CccCCCcCCCcccchhh-hhhhCCCCCCcEEEEEEeeecc---ccCh
Q 011355          234 KYAHHVATSDHCGDVLKRIYMIPEERVHVILN-GVDEEVFKPDVAMGKDF-KKKFGIPENRSLVLGMAGRLVK---DKGH  308 (488)
Q Consensus       234 ~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~n-gvd~~~~~~~~~~~~~~-r~~~~i~~~~~~~i~~~Grl~~---~Kg~  308 (488)
                      -++..++.++..++.+.+ .|++++++++++| ++|.-.... ....... ...+.-...+++++++.=+...   ....
T Consensus       122 la~lhf~~t~~~~~~L~~-~G~~~~rI~~vG~~~~D~l~~~~-~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~  199 (346)
T PF02350_consen  122 LAHLHFAPTEEARERLLQ-EGEPPERIFVVGNPGIDALLQNK-EEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERL  199 (346)
T ss_dssp             H-SEEEESSHHHHHHHHH-TT--GGGEEE---HHHHHHHHHH-HTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--H
T ss_pred             hhhhhccCCHHHHHHHHh-cCCCCCeEEEEChHHHHHHHHhH-HHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHH
Confidence            377889999999999999 7999999999998 455431111 1111111 1111002344366655533322   2345


Q ss_pred             HHHHHHHHHhHhhccCCCCCeEEEEEeC--CCch----hHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCC
Q 011355          309 PLMFEALKQLLAENDTFRRSTVFLVAGD--GPWG----ARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLD  382 (488)
Q Consensus       309 ~~ll~a~~~l~~~~~~~~~~~~l~ivG~--g~~~----~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~  382 (488)
                      ..+.++++.+.+.     +++.+++...  ....    +.++++ ++|.+...++..++..+++.|+++|.-|      |
T Consensus       200 ~~i~~~l~~L~~~-----~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~vvgdS------s  267 (346)
T PF02350_consen  200 EQILEALKALAER-----QNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLKNADLVVGDS------S  267 (346)
T ss_dssp             HHHHHHHHHHHHH-----TTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHHHHESEEEESS------H
T ss_pred             HHHHHHHHHHHhc-----CCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHHhcceEEEEcC------c
Confidence            6777777777765     3677776664  2222    334445 6999999999999999999999999744      3


Q ss_pred             hHHH-HHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHH
Q 011355          383 HTVL-EAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAA  461 (488)
Q Consensus       383 ~~~l-EAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~  461 (488)
                       .+. ||..+|+|+|.-+..+-+.+.+..+.+-+ +..|.+++.++|.+++.+ .+.+..+..     ...-|.-.+.++
T Consensus       268 -GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~~~~~~I~~ai~~~l~~-~~~~~~~~~-----~~npYgdG~as~  339 (346)
T PF02350_consen  268 -GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VGTDPEAIIQAIEKALSD-KDFYRKLKN-----RPNPYGDGNASE  339 (346)
T ss_dssp             -HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ETSSHHHHHHHHHHHHH--HHHHHHHHC-----S--TT-SS-HHH
T ss_pred             -cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eCCCHHHHHHHHHHHHhC-hHHHHhhcc-----CCCCCCCCcHHH
Confidence             355 99999999999866565546666666555 766999999999999987 555444322     112344445555


Q ss_pred             HHHHHH
Q 011355          462 AYERLF  467 (488)
Q Consensus       462 ~~~~~~  467 (488)
                      ++.+++
T Consensus       340 rI~~~L  345 (346)
T PF02350_consen  340 RIVEIL  345 (346)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            555544

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.19  E-value=2.8e-09  Score=98.67  Aligned_cols=253  Identities=17%  Similarity=0.106  Sum_probs=142.6

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC---CCCCceEEEecCCCCccCcchhHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFP---TYPISSLYFHLSKPTAAGYLDQSIVWQQ  154 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      ||+|.+...+.  ...|.-.++..|+++|.++|++|.+++.........   ..+.+.+.+....    .   ...-...
T Consensus         1 ~i~ir~Da~~~--iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~----~---~~~d~~~   71 (279)
T TIGR03590         1 KILFRADASSE--IGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDES----S---RYDDALE   71 (279)
T ss_pred             CEEEEecCCcc--ccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCC----c---hhhhHHH
Confidence            57788776543  456777889999999999999999999876442111   1223222221111    0   1112222


Q ss_pred             HHHHhcCCCCCcEEEeCCcchH----HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhh
Q 011355          155 LQTQNSTGKPFDVIHTESVGLR----HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVK  230 (488)
Q Consensus       155 ~~~~~~~~~~~Dvv~~~~~~~~----~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (488)
                      +....... +||+|++.++.+.    ...+...+ .+..+-+...                                  +
T Consensus        72 ~~~~l~~~-~~d~vV~D~y~~~~~~~~~~k~~~~-~l~~iDD~~~----------------------------------~  115 (279)
T TIGR03590        72 LINLLEEE-KFDILIVDHYGLDADWEKLIKEFGR-KILVIDDLAD----------------------------------R  115 (279)
T ss_pred             HHHHHHhc-CCCEEEEcCCCCCHHHHHHHHHhCC-eEEEEecCCC----------------------------------C
Confidence            33333333 8999999875422    11212233 3444444210                                  0


Q ss_pred             hcCCccEEEEcChhhHHHHHHHhc-CCCCcEEEecCCccCCCcCCCcccchhhhhhh--CCC-CCCcEEEEEEeeecccc
Q 011355          231 FFPKYAHHVATSDHCGDVLKRIYM-IPEERVHVILNGVDEEVFKPDVAMGKDFKKKF--GIP-ENRSLVLGMAGRLVKDK  306 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~~~g-~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~--~i~-~~~~~~i~~~Grl~~~K  306 (488)
                       -..+|.++..+.. .+... +.+ +++......  |.+-....      .++.+..  ... ++.+.++++.|..++.+
T Consensus       116 -~~~~D~vin~~~~-~~~~~-y~~~~~~~~~~l~--G~~Y~~lr------~eF~~~~~~~~~~~~~~~iLi~~GG~d~~~  184 (279)
T TIGR03590       116 -PHDCDLLLDQNLG-ADASD-YQGLVPANCRLLL--GPSYALLR------EEFYQLATANKRRKPLRRVLVSFGGADPDN  184 (279)
T ss_pred             -CcCCCEEEeCCCC-cCHhH-hcccCcCCCeEEe--cchHHhhh------HHHHHhhHhhhcccccCeEEEEeCCcCCcC
Confidence             0146777776654 33222 223 344444443  43221111      1111100  000 11225677889888877


Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeEE-EEEeCC-CchhHHhh---hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCC
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTVF-LVAGDG-PWGARYRD---LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGL  381 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~l-~ivG~g-~~~~~~~~---l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~  381 (488)
                      ....+++++.++.       +++++ +++|.+ +..+.+++   ...+|.+.++  .+++.++|+.||++|.+.      
T Consensus       185 ~~~~~l~~l~~~~-------~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~--~~~m~~lm~~aDl~Is~~------  249 (279)
T TIGR03590       185 LTLKLLSALAESQ-------INISITLVTGSSNPNLDELKKFAKEYPNIILFID--VENMAELMNEADLAIGAA------  249 (279)
T ss_pred             HHHHHHHHHhccc-------cCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeC--HHHHHHHHHHCCEEEECC------
Confidence            6677788877653       23332 367765 34444443   2368999999  459999999999999732      


Q ss_pred             ChHHHHHHHcCCcEEEeCCC
Q 011355          382 DHTVLEAMLSGKPLMATRLA  401 (488)
Q Consensus       382 ~~~~lEAma~G~PVI~~~~~  401 (488)
                      |.++.|++++|+|+|+....
T Consensus       250 G~T~~E~~a~g~P~i~i~~~  269 (279)
T TIGR03590       250 GSTSWERCCLGLPSLAICLA  269 (279)
T ss_pred             chHHHHHHHcCCCEEEEEec
Confidence            47999999999999987653

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=99.18  E-value=5.6e-09  Score=97.57  Aligned_cols=295  Identities=14%  Similarity=0.122  Sum_probs=165.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCCCccC-cchhHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKPTAAG-YLDQSIVWQ  153 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~-~~~~~~~~~  153 (488)
                      |||.+-..+-       ..-.+..++++.|.++||+|.+.+...+......  .+.+.+.+-.......+ .........
T Consensus         1 MkIwiDi~~p-------~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~R~~   73 (335)
T PF04007_consen    1 MKIWIDITHP-------AHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHGDSLYGKLLESIERQY   73 (335)
T ss_pred             CeEEEECCCc-------hHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCCCCHHHHHHHHHHHHH
Confidence            7888877532       2367888999999999999999998764322111  34444333222211100 011111112


Q ss_pred             HHHHHhcCCCCCcEEEeCCc-chH-HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          154 QLQTQNSTGKPFDVIHTESV-GLR-HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~~-~~~-~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ++.+...+. +||++++... ... .....++| .+.....-..                     ...   .+     -.
T Consensus        74 ~l~~~~~~~-~pDv~is~~s~~a~~va~~lgiP-~I~f~D~e~a---------------------~~~---~~-----Lt  122 (335)
T PF04007_consen   74 KLLKLIKKF-KPDVAISFGSPEAARVAFGLGIP-SIVFNDTEHA---------------------IAQ---NR-----LT  122 (335)
T ss_pred             HHHHHHHhh-CCCEEEecCcHHHHHHHHHhCCC-eEEEecCchh---------------------hcc---ce-----ee
Confidence            222223333 8999998753 333 44555667 5554443100                     000   00     23


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccc-----c
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKD-----K  306 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~-----K  306 (488)
                      +..+|.++++.-.-.+.+.+ +|.. +++ .-+||++...+-..-.....+.+++|++++. ++++   |..+.     +
T Consensus       123 ~Pla~~i~~P~~~~~~~~~~-~G~~-~~i-~~y~G~~E~ayl~~F~Pd~~vl~~lg~~~~~-yIvv---R~~~~~A~y~~  195 (335)
T PF04007_consen  123 LPLADVIITPEAIPKEFLKR-FGAK-NQI-RTYNGYKELAYLHPFKPDPEVLKELGLDDEP-YIVV---RPEAWKASYDN  195 (335)
T ss_pred             hhcCCeeECCcccCHHHHHh-cCCc-CCE-EEECCeeeEEeecCCCCChhHHHHcCCCCCC-EEEE---EeccccCeeec
Confidence            45678888877665565555 7754 332 2278887643222223336788899977544 5554   33321     2


Q ss_pred             Ch-HHHHHHHHHhHhhccCCCCCeEEEEEeCCCchh-HHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          307 GH-PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGA-RYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       307 g~-~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~-~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      |. ..+-+.+..+.+..     +. ++++.+.+... ..++..  +.+...  .-+..+++.-||++|.     +| |..
T Consensus       196 ~~~~i~~~ii~~L~~~~-----~~-vV~ipr~~~~~~~~~~~~--~~i~~~--~vd~~~Ll~~a~l~Ig-----~g-gTM  259 (335)
T PF04007_consen  196 GKKSILPEIIEELEKYG-----RN-VVIIPRYEDQRELFEKYG--VIIPPE--PVDGLDLLYYADLVIG-----GG-GTM  259 (335)
T ss_pred             CccchHHHHHHHHHhhC-----ce-EEEecCCcchhhHHhccC--ccccCC--CCCHHHHHHhcCEEEe-----CC-cHH
Confidence            22 23446666666544     33 66666554433 333332  544443  2355689999999995     33 678


Q ss_pred             HHHHHHcCCcEEEeCCCCcc--cceeecCCceeEeCC-CHHHHHHHHHHHHhc
Q 011355          385 VLEAMLSGKPLMATRLASIV--GSVIVGTDMGYLFSP-QVESVKKALYGIWAD  434 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~~~~~--~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~  434 (488)
                      ..||...|+|+|++..|...  ++.+.  +.|+++.. |++++.+.+.+....
T Consensus       260 a~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~~  310 (335)
T PF04007_consen  260 AREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLGK  310 (335)
T ss_pred             HHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhhc
Confidence            99999999999987543221  12332  34677776 999998866665443

They are found in archaea and some bacteria and have no known function.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=99.18  E-value=2.1e-09  Score=99.18  Aligned_cols=193  Identities=17%  Similarity=0.186  Sum_probs=131.1

Q ss_pred             CCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecc--ccChHH
Q 011355          233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVK--DKGHPL  310 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~--~Kg~~~  310 (488)
                      +.+|+++++=++..+.+.+ +|++   ++.|+|+.-...  +...++...|++++++.+.+.+.+..|+-..  .+..+.
T Consensus       135 ~~~D~lLailPFE~~~y~k-~g~~---~~yVGHpl~d~i--~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~  208 (381)
T COG0763         135 KYVDHLLAILPFEPAFYDK-FGLP---CTYVGHPLADEI--PLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPP  208 (381)
T ss_pred             HHhhHeeeecCCCHHHHHh-cCCC---eEEeCChhhhhc--cccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHH
Confidence            4578889999999999988 7764   677777653221  1223346699999999999888888886533  366788


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh--hCCcE-EEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHH
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD--LGTNV-IVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLE  387 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~--l~~~V-~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lE  387 (488)
                      +.+++..+.++.    |+.++++--..+..+..+.  +...+ ...-.+...+-.+.+.+||+.+..|      |.+.+|
T Consensus       209 f~~a~~~l~~~~----~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aS------GT~tLE  278 (381)
T COG0763         209 FVQAAQELKARY----PDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADAALAAS------GTATLE  278 (381)
T ss_pred             HHHHHHHHHhhC----CCceEEEecCcHHHHHHHHHHhhccccCceEEecCchHHHHHHHhhHHHHhc------cHHHHH
Confidence            899999999898    9999998876554333332  21111 0111222447788999999988755      679999


Q ss_pred             HHHcCCcEEEe-CC----------------CCcccceeecCCceeEeC-----C-CHHHHHHHHHHHHhcCHHHHHHHHH
Q 011355          388 AMLSGKPLMAT-RL----------------ASIVGSVIVGTDMGYLFS-----P-QVESVKKALYGIWADGREVLEKKGL  444 (488)
Q Consensus       388 Ama~G~PVI~~-~~----------------~~~~~e~v~~~~~g~l~~-----~-d~~~la~~i~~ll~~~~~~~~~~~~  444 (488)
                      ++.+|+|.|++ ..                -+.+ .++.+.   .+++     . .++.+++++..++.| .+.++.+.+
T Consensus       279 ~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLp-NIi~~~---~ivPEliq~~~~pe~la~~l~~ll~~-~~~~~~~~~  353 (381)
T COG0763         279 AALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLP-NILAGR---EIVPELIQEDCTPENLARALEELLLN-GDRREALKE  353 (381)
T ss_pred             HHHhCCCEEEEEeccHHHHHHHHHhccCCcccch-HHhcCC---ccchHHHhhhcCHHHHHHHHHHHhcC-hHhHHHHHH
Confidence            99999999986 22                2222 222221   1222     2 599999999999999 555555544


Q ss_pred             HH
Q 011355          445 VA  446 (488)
Q Consensus       445 ~a  446 (488)
                      ..
T Consensus       354 ~~  355 (381)
T COG0763         354 KF  355 (381)
T ss_pred             HH
Confidence            43

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=99.17  E-value=1.4e-09  Score=104.85  Aligned_cols=180  Identities=18%  Similarity=0.198  Sum_probs=121.6

Q ss_pred             hhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch-hHHhh----h---CCcEE
Q 011355          280 KDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG-ARYRD----L---GTNVI  351 (488)
Q Consensus       280 ~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~-~~~~~----l---~~~V~  351 (488)
                      ...|+.+|+|++. ++++++.++  .|=.+..++++.++.+..    |+.+|++...+... +.+++    .   .+++.
T Consensus       273 ~~~R~~~gLp~d~-vvF~~fn~~--~KI~p~~l~~W~~IL~~v----P~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~  345 (468)
T PF13844_consen  273 VTTRAQYGLPEDA-VVFGSFNNL--FKISPETLDLWARILKAV----PNSRLWLLRFPASGEARLRRRFAAHGVDPDRII  345 (468)
T ss_dssp             EEETGGGT--SSS-EEEEE-S-G--GG--HHHHHHHHHHHHHS----TTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEE
T ss_pred             ccCHHHcCCCCCc-eEEEecCcc--ccCCHHHHHHHHHHHHhC----CCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEE
Confidence            3568899999988 777776654  677788999999999999    99999887654322 22222    2   27899


Q ss_pred             EeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccc----eeec-CCceeEeCCCHHHHHH
Q 011355          352 VLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGS----VIVG-TDMGYLFSPQVESVKK  426 (488)
Q Consensus       352 ~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e----~v~~-~~~g~l~~~d~~~la~  426 (488)
                      |.+..+.++....|..+|+++-+..+  +-+.+.+||+.+|+|||+-.-....+.    ++.. |-..++.. |.++..+
T Consensus       346 f~~~~~~~ehl~~~~~~DI~LDT~p~--nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~-s~~eYv~  422 (468)
T PF13844_consen  346 FSPVAPREEHLRRYQLADICLDTFPY--NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD-SEEEYVE  422 (468)
T ss_dssp             EEE---HHHHHHHGGG-SEEE--SSS----SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S-SHHHHHH
T ss_pred             EcCCCCHHHHHHHhhhCCEEeeCCCC--CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC-CHHHHHH
Confidence            99998888888899999999997643  447899999999999998764444321    1111 22233444 8999999


Q ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHh--hhCCHHHHHHHHHHHHHHh
Q 011355          427 ALYGIWADGREVLEKKGLVARKRGL--NLFTATKMAAAYERLFLCI  470 (488)
Q Consensus       427 ~i~~ll~~~~~~~~~~~~~a~~~~~--~~fs~~~~~~~~~~~~~~~  470 (488)
                      ...++.+| ++.++.++++-++...  .-|+....++.+++.|+.+
T Consensus       423 ~Av~La~D-~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m  467 (468)
T PF13844_consen  423 IAVRLATD-PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM  467 (468)
T ss_dssp             HHHHHHH--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred             HHHHHhCC-HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence            99999999 9999999998887664  3489999999999999864

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.13  E-value=1.7e-08  Score=92.69  Aligned_cols=332  Identities=14%  Similarity=0.026  Sum_probs=202.0

Q ss_pred             CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCC-c-eEEEecCCCCccCcchhHHHHHHHHHHhcCCCCCcEE
Q 011355           91 HAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPI-S-SLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVI  168 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv  168 (488)
                      ..+|...+..-+.++|...||+++.+-..+.......... + .-.......       . -....+....  ..++|+|
T Consensus        12 y~~~~~~~~~~~~~~l~~~g~kvlflE~~~~~~~k~rd~~~~~~~~~~~~~~-------~-~e~~~~~~i~--~fk~d~i   81 (373)
T COG4641          12 YNNGSAEYYRGLLRALKMDGMKVLFLESGDFWDYKNRDIDAEDGCTEAFYKD-------Q-PELESLLYIR--EFKPDII   81 (373)
T ss_pred             hcCCchhhHHHHHHHHHhccceEEEEecccHHhhhcccccCccchhheeecC-------c-HHHHHHHHHH--hcCCcEE
Confidence            4567777888999999999999999988764332221111 1 000011110       0 0111111111  1289999


Q ss_pred             EeCCc----------chHHhhhc-cCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccE
Q 011355          169 HTESV----------GLRHTRAR-NLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAH  237 (488)
Q Consensus       169 ~~~~~----------~~~~~~~~-~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  237 (488)
                      +....          .++.|+.. .+| ++.+.-+.++.......+              ....+.     .+.+.-.|.
T Consensus        82 v~~~~~~~~~~~~~~~~~a~l~~~~l~-~~~w~te~p~~~~~~~~~--------------~~~~~~-----~~~l~~fd~  141 (373)
T COG4641          82 VNMSGDDQPDEESTIDLWAWLKRKCLP-VIVWYTEDPYDTDIFSQV--------------AEEQLA-----RRPLFIFDN  141 (373)
T ss_pred             EEecccccccceehHHHHHHhhcCCcc-eEEEEeccchhhhhhhhh--------------hHHHhh-----ccccchhhh
Confidence            87531          23444443 345 566665554433221111              111111     012233344


Q ss_pred             EEEcChhh-HHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHH
Q 011355          238 HVATSDHC-GDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK  316 (488)
Q Consensus       238 ii~~S~~~-~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~  316 (488)
                      |++.++.. ++.+.+..+  ..+...++.++|.+.+.+.+.+.           ...--+.++|+..+. ..+.+-+.+.
T Consensus       142 v~~~g~~l~~~~yyq~~~--~~~~~~~~~a~d~~~~~~i~~da-----------~~~~dL~~ign~~pD-r~e~~ke~~~  207 (373)
T COG4641         142 VLSFGGGLVANKYYQEGG--ARNCYYLPWAVDDSLFHPIPPDA-----------SYDVDLNLIGNPYPD-RVEEIKEFFV  207 (373)
T ss_pred             hhhccchHHHHHHHHhhc--ccceeccCccCCchhcccCCccc-----------cceeeeEEecCCCcc-HHHHHHHHhh
Confidence            56666665 555554333  46788899999998887755321           111357788876655 1233333332


Q ss_pred             HhHhhccCCCCCeEEEEEeCCCchhHHhh-hCCcEEEeCccCH-HHHHHHHHhcCEEEeCCCC--CCC---CChHHHHHH
Q 011355          317 QLLAENDTFRRSTVFLVAGDGPWGARYRD-LGTNVIVLGPLDQ-TRLAMFYNAIDIFVNPTLR--AQG---LDHTVLEAM  389 (488)
Q Consensus       317 ~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-l~~~V~~~g~v~~-~~l~~~~~~adv~v~ps~~--~eg---~~~~~lEAm  389 (488)
                      .-..+.   ..+-++.+.|..-....... ..+++...|+++. ..+...++..|+.+.-+..  .++   +.+-+.|++
T Consensus       208 ~ps~kl---~v~rr~~~~g~~y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeia  284 (373)
T COG4641         208 EPSFKL---MVDRRFYVLGPRYPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIA  284 (373)
T ss_pred             ccchhh---hccceeeecCCccchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHh
Confidence            211111   01245556665411222222 3468888888766 8899999999998774431  222   278999999


Q ss_pred             HcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          390 LSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       390 a~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                      +||.|.|+....++. ..+.+|+.-.+.. |..++.+.+..++.. ++.++++++.+++.+...|+.+.-+..+.+....
T Consensus       285 gc~~~liT~~~~~~e-~~f~pgk~~iv~~-d~kdl~~~~~yll~h-~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s  361 (373)
T COG4641         285 GCGGFLITDYWKDLE-KFFKPGKDIIVYQ-DSKDLKEKLKYLLNH-PDERKEIAECAYERVLARHTYEERIFKLLNEIAS  361 (373)
T ss_pred             hcCCccccccHHHHH-HhcCCchheEEec-CHHHHHHHHHHHhcC-cchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence            999999999888875 6777777766666 999999999999999 8999999999999999999999999888888776


Q ss_pred             hhc
Q 011355          470 ISN  472 (488)
Q Consensus       470 ~~~  472 (488)
                      +..
T Consensus       362 I~~  364 (373)
T COG4641         362 INI  364 (373)
T ss_pred             HHH
Confidence            443

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=99.06  E-value=7.6e-08  Score=91.50  Aligned_cols=119  Identities=14%  Similarity=0.153  Sum_probs=78.9

Q ss_pred             EEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEe
Q 011355          294 LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVN  373 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~  373 (488)
                      .++++.|.    .+...+++++.++        +++.+++ |.....  ...+.+++.+.++.+ +++.++|..||++|.
T Consensus       190 ~iLv~~g~----~~~~~l~~~l~~~--------~~~~~i~-~~~~~~--~~~~~~~v~~~~~~~-~~~~~~l~~ad~vI~  253 (321)
T TIGR00661       190 YILVYIGF----EYRYKILELLGKI--------ANVKFVC-YSYEVA--KNSYNENVEIRRITT-DNFKELIKNAELVIT  253 (321)
T ss_pred             cEEEECCc----CCHHHHHHHHHhC--------CCeEEEE-eCCCCC--ccccCCCEEEEECCh-HHHHHHHHhCCEEEE
Confidence            56666554    2445567766544        5655443 432211  124567999999865 789999999999998


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEEeCCCCccc-----ceeecCCceeEeCC-CHHHHHHHHHHHHhc
Q 011355          374 PTLRAQGLDHTVLEAMLSGKPLMATRLASIVG-----SVIVGTDMGYLFSP-QVESVKKALYGIWAD  434 (488)
Q Consensus       374 ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~-----e~v~~~~~g~l~~~-d~~~la~~i~~ll~~  434 (488)
                      -+    |+ .++.||+++|+|+|.....+..+     ..+.+.+.|..++. +. ++.+++...+++
T Consensus       254 ~~----G~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~  314 (321)
T TIGR00661       254 HG----GF-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNM  314 (321)
T ss_pred             CC----Ch-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhcccc
Confidence            33    32 47999999999999998876442     23566677888876 55 555555555544

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=99.02  E-value=1.3e-08  Score=85.99  Aligned_cols=168  Identities=19%  Similarity=0.177  Sum_probs=103.1

Q ss_pred             EEEEEec-CCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCCCccCcchhH----H
Q 011355           78 KIALFVK-KWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKPTAAGYLDQS----I  150 (488)
Q Consensus        78 kIl~i~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~----~  150 (488)
                      ||+++.. ..|.  ..||.|+++.+|+..|+++|++|+|+|..........  .+...++++.....  ......    .
T Consensus         3 kIaIiGtrGIPa--~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g--~~~si~yd~~s   78 (185)
T PF09314_consen    3 KIAIIGTRGIPA--RYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNG--SAESIIYDFLS   78 (185)
T ss_pred             eEEEEeCCCCCc--ccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCC--chHHHHHHHHH
Confidence            7899966 4665  8999999999999999999999999998764432222  33333444332221  111111    1


Q ss_pred             HHHHHHHHhcCCCCCcEEEeCCcc---hH-Hhhh----ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          151 VWQQLQTQNSTGKPFDVIHTESVG---LR-HTRA----RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~Dvv~~~~~~---~~-~~~~----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ....+........+.|+++++...   +. .+..    .+.+ ++...||..+.-              .++ ..+.++.
T Consensus        79 l~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~-v~vN~DGlEWkR--------------~KW-~~~~k~~  142 (185)
T PF09314_consen   79 LLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGK-VVVNMDGLEWKR--------------AKW-GRPAKKY  142 (185)
T ss_pred             HHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCc-EEECCCcchhhh--------------hhc-CHHHHHH
Confidence            222221111111268899987643   11 1221    1235 888888864421              112 1222333


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCcc
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVD  268 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd  268 (488)
                      .++.+ .-..+.+|.+|+-|+...+++.+.|+  ..++.+|++|.|
T Consensus       143 lk~~E-~~avk~ad~lIaDs~~I~~y~~~~y~--~~~s~~IaYGad  185 (185)
T PF09314_consen  143 LKFSE-KLAVKYADRLIADSKGIQDYIKERYG--RKKSTFIAYGAD  185 (185)
T ss_pred             HHHHH-HHHHHhCCEEEEcCHHHHHHHHHHcC--CCCcEEecCCCC
Confidence            33322 23568899999999999999999996  467899999976

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=99.01  E-value=5.9e-08  Score=94.30  Aligned_cols=307  Identities=15%  Similarity=0.189  Sum_probs=149.5

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHH--HCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHH
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALA--KRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVW  152 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~--~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (488)
                      ++-+|++.+..   +...++-..   .+.+.|.  ..++++.+++.....    .....+..+....           .+
T Consensus        12 ~~~~Ivf~~~~---g~~~~dN~~---~l~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~-----------s~   70 (369)
T PF04464_consen   12 KKKKIVFESES---GNKFSDNPK---ALFEYLIKNYPDYKIYWIINKKSP----ELKPKGIKVVKFG-----------SL   70 (369)
T ss_dssp             EEEEEEEEBTT---TTBS-HHHH---HHHHHHHHH-TTSEEEEEESSGGG--------SS-EEEETT-----------SH
T ss_pred             cCCEEEEEECC---CCCCCCCHH---HHHHHHHhhCCCcEEEEEEcCchH----hhccCCceEEeec-----------HH
Confidence            44466666642   223444444   4555665  336778777766433    1111112221111           12


Q ss_pred             HHHHHHhcCCCCCcEEEeCCcch---HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHh
Q 011355          153 QQLQTQNSTGKPFDVIHTESVGL---RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEV  229 (488)
Q Consensus       153 ~~~~~~~~~~~~~Dvv~~~~~~~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      +.+....    ..+++++.+...   ......+.. ++..+||.+......+...    ..  .. ..         ...
T Consensus        71 ~~~~~~~----~Ak~~i~~~~~~~~~~~~~~~~~~-~i~lwHG~~~K~~g~~~~~----~~--~~-~~---------~~~  129 (369)
T PF04464_consen   71 KHIYYLA----RAKYIISDSYFPDLIYFKKRKNQK-YIQLWHGIPLKKIGYDSPD----NK--NY-RK---------NYK  129 (369)
T ss_dssp             HHHHHHH----HEEEEEESS---T--TS---TTSE-EEE--SS--SB--GGG-S---------TS--H---------HHH
T ss_pred             HHHHHHH----hCcEEEECCCCCcccccccCCCcE-EEEecCCCcccccchhccc----cc--cc-hh---------hhh
Confidence            2222223    578888874222   222233333 8999999744321111100    00  00 00         111


Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccCh-
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH-  308 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~-  308 (488)
                      +.....|.+++.|+...+.+.+.++.+.+++.+.+.+=....+.........+++.++++.++ .+|+|+-++...... 
T Consensus       130 ~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~-k~ILyaPT~R~~~~~~  208 (369)
T PF04464_consen  130 RNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDK-KVILYAPTWRDNSSNE  208 (369)
T ss_dssp             HHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS--EEEEEE----GGG--G
T ss_pred             hhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCC-cEEEEeeccccccccc
Confidence            345788999999999999999999998888877655422222333333356788899998888 578888776543322 


Q ss_pred             -----HHH--HHHHHHhHhhccCCCCCeEEEEEeCCCchhHH---hhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          309 -----PLM--FEALKQLLAENDTFRRSTVFLVAGDGPWGARY---RDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       309 -----~~l--l~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~---~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                           ...  .+.+..+.  .    +++.+++-.-.......   ....++|.+...  .+++.+++..||++|.   . 
T Consensus       209 ~~~~~~~~~~~~~l~~~~--~----~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~--~~~~~~ll~~aDiLIT---D-  276 (369)
T PF04464_consen  209 YFKFFFSDLDFEKLNFLL--K----NNYVLIIKPHPNMKKKFKDFKEDNSNIIFVSD--NEDIYDLLAAADILIT---D-  276 (369)
T ss_dssp             GSS----TT-HHHHHHHH--T----TTEEEEE--SHHHHTT----TT-TTTEEE-TT---S-HHHHHHT-SEEEE---S-
T ss_pred             cccccccccCHHHHHHHh--C----CCcEEEEEeCchhhhchhhhhccCCcEEECCC--CCCHHHHHHhcCEEEE---e-
Confidence                 112  23333222  2    67877776642222222   234578888776  5599999999999995   1 


Q ss_pred             CCCChHHHHHHHcCCcEEEe--CCCCccc--ce---eecCCceeEeCCCHHHHHHHHHHHHhcCHHHHH
Q 011355          379 QGLDHTVLEAMLSGKPLMAT--RLASIVG--SV---IVGTDMGYLFSPQVESVKKALYGIWADGREVLE  440 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~--~~~~~~~--e~---v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~  440 (488)
                        ++.++.|++.+++|||..  |......  ..   ..+...|-.+. +.++|.++|..++++ ++...
T Consensus       277 --ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~-~~~eL~~~i~~~~~~-~~~~~  341 (369)
T PF04464_consen  277 --YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVY-NFEELIEAIENIIEN-PDEYK  341 (369)
T ss_dssp             --S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EES-SHHHHHHHHTTHHHH-HHHTH
T ss_pred             --chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeC-CHHHHHHHHHhhhhC-CHHHH
Confidence              355999999999999965  3211110  11   12334455665 899999999999887 54443

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.00  E-value=3.7e-08  Score=93.47  Aligned_cols=186  Identities=17%  Similarity=0.215  Sum_probs=123.8

Q ss_pred             CccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecc--ccChHHH
Q 011355          234 KYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVK--DKGHPLM  311 (488)
Q Consensus       234 ~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~--~Kg~~~l  311 (488)
                      .+|+++++=+...+.+.+ .|+   +++.++|+.-.. ..... .....++.+ ++++++.+.+..|+-..  .+....+
T Consensus       133 ~~D~ll~ifPFE~~~y~~-~g~---~~~~VGHPl~d~-~~~~~-~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~  205 (373)
T PF02684_consen  133 YVDHLLVIFPFEPEFYKK-HGV---PVTYVGHPLLDE-VKPEP-DRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIF  205 (373)
T ss_pred             HHhheeECCcccHHHHhc-cCC---CeEEECCcchhh-hccCC-CHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHH
Confidence            357779999999999988 664   578888875222 22211 235566777 88888777788886533  3566899


Q ss_pred             HHHHHHhHhhccCCCCCeEEEEEeCCCchhH-Hhh----hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHH
Q 011355          312 FEALKQLLAENDTFRRSTVFLVAGDGPWGAR-YRD----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVL  386 (488)
Q Consensus       312 l~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~-~~~----l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~l  386 (488)
                      ++++..+.+++    |++++++.......+. +++    ...++.+.-.  ..+-.+.+++||+.+..|      |.+.+
T Consensus       206 l~aa~~l~~~~----p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~m~~ad~al~~S------GTaTL  273 (373)
T PF02684_consen  206 LEAAKLLKKQR----PDLQFVVPVAPEVHEELIEEILAEYPPDVSIVII--EGESYDAMAAADAALAAS------GTATL  273 (373)
T ss_pred             HHHHHHHHHhC----CCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEc--CCchHHHHHhCcchhhcC------CHHHH
Confidence            99999999999    9999998876543332 222    2233333222  346778999999998766      67999


Q ss_pred             HHHHcCCcEEEeC-CC----------------CcccceeecCC-ceeEeC-C-CHHHHHHHHHHHHhcCHHHHH
Q 011355          387 EAMLSGKPLMATR-LA----------------SIVGSVIVGTD-MGYLFS-P-QVESVKKALYGIWADGREVLE  440 (488)
Q Consensus       387 EAma~G~PVI~~~-~~----------------~~~~e~v~~~~-~g~l~~-~-d~~~la~~i~~ll~~~~~~~~  440 (488)
                      |++.+|+|.|+.- ..                +++ .++.+.+ ..-++. . +++.+++++..++.| ++.++
T Consensus       274 E~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~-Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~-~~~~~  345 (373)
T PF02684_consen  274 EAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLP-NIIAGREVVPELIQEDATPENIAAELLELLEN-PEKRK  345 (373)
T ss_pred             HHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeech-hhhcCCCcchhhhcccCCHHHHHHHHHHHhcC-HHHHH
Confidence            9999999998752 11                222 2222111 111222 3 799999999999998 55533

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=98.98  E-value=2.5e-08  Score=96.93  Aligned_cols=162  Identities=19%  Similarity=0.165  Sum_probs=108.8

Q ss_pred             CCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHh
Q 011355          288 IPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNA  367 (488)
Q Consensus       288 i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~  367 (488)
                      ++.+++++.+..|+....   ..+++.+.......     +.++++...+ .+..+..+..|+...+++++.+   ++..
T Consensus       233 ~~~d~~~vyvslGt~~~~---~~l~~~~~~a~~~l-----~~~vi~~~~~-~~~~~~~~p~n~~v~~~~p~~~---~l~~  300 (406)
T COG1819         233 IPADRPIVYVSLGTVGNA---VELLAIVLEALADL-----DVRVIVSLGG-ARDTLVNVPDNVIVADYVPQLE---LLPR  300 (406)
T ss_pred             hcCCCCeEEEEcCCcccH---HHHHHHHHHHHhcC-----CcEEEEeccc-cccccccCCCceEEecCCCHHH---Hhhh
Confidence            455666777778877544   44454444444332     5666666644 3335667889999999998764   8899


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcc---cceeecCCceeEeC--C-CHHHHHHHHHHHHhcCHHHHHH
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIV---GSVIVGTDMGYLFS--P-QVESVKKALYGIWADGREVLEK  441 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~---~e~v~~~~~g~l~~--~-d~~~la~~i~~ll~~~~~~~~~  441 (488)
                      ||++|+..    |. .++.||+.+|+|+|+-..+.-.   .+.+++-+.|....  . +.+.++++|++++.+ +..++.
T Consensus       301 ad~vI~hG----G~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~-~~~~~~  374 (406)
T COG1819         301 ADAVIHHG----GA-GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLAD-DSYRRA  374 (406)
T ss_pred             cCEEEecC----Cc-chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcC-HHHHHH
Confidence            99999833    43 4899999999999998665311   13566778888877  4 899999999999998 544443


Q ss_pred             HHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          442 KGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       442 ~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      . ++..+...+.-..+++++.+++...
T Consensus       375 ~-~~~~~~~~~~~g~~~~a~~le~~~~  400 (406)
T COG1819         375 A-ERLAEEFKEEDGPAKAADLLEEFAR  400 (406)
T ss_pred             H-HHHHHHhhhcccHHHHHHHHHHHHh
Confidence            3 4444444443455555555555443

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=98.95  E-value=8.7e-07  Score=88.83  Aligned_cols=136  Identities=15%  Similarity=0.140  Sum_probs=90.0

Q ss_pred             cEEEEEEeeeccc-----cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHH--
Q 011355          293 SLVLGMAGRLVKD-----KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFY--  365 (488)
Q Consensus       293 ~~~i~~~Grl~~~-----Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~--  365 (488)
                      +.+++..|+....     +-...+++|++.+        + .++++...++...  ..+.+||.+.+++|+.+   ++  
T Consensus       297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l--------~-~~viw~~~~~~~~--~~~p~Nv~i~~w~Pq~~---lL~h  362 (507)
T PHA03392        297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL--------P-YNVLWKYDGEVEA--INLPANVLTQKWFPQRA---VLKH  362 (507)
T ss_pred             cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC--------C-CeEEEEECCCcCc--ccCCCceEEecCCCHHH---HhcC
Confidence            3777788886432     2234555555544        4 3555554433222  34678999999999764   55  


Q ss_pred             HhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHH
Q 011355          366 NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVGTDMGYLFSP---QVESVKKALYGIWADGREVL  439 (488)
Q Consensus       366 ~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~  439 (488)
                      ..+++||.   + .| ..++.||+.+|+|+|+....+-..   ..+++.+.|..++.   +.+++.++|.+++++ ++.+
T Consensus       363 p~v~~fIt---H-GG-~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~-~~y~  436 (507)
T PHA03392        363 KNVKAFVT---Q-GG-VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIEN-PKYR  436 (507)
T ss_pred             CCCCEEEe---c-CC-cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCC-HHHH
Confidence            56888886   3 34 458999999999999976544110   23456677887764   789999999999998 6655


Q ss_pred             HHHHHHHHH
Q 011355          440 EKKGLVARK  448 (488)
Q Consensus       440 ~~~~~~a~~  448 (488)
                      ++..+-+..
T Consensus       437 ~~a~~ls~~  445 (507)
T PHA03392        437 KNLKELRHL  445 (507)
T ss_pred             HHHHHHHHH
Confidence            544444333

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=98.87  E-value=8.7e-06  Score=79.41  Aligned_cols=323  Identities=11%  Similarity=0.082  Sum_probs=166.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCC-CC--CceEEEecCCCC----------
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKR--GHELHIFTASCLNCSFPT-YP--ISSLYFHLSKPT----------  141 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~-~~--~~~i~~~~~~~~----------  141 (488)
                      |||+++.. |  +...-|.+-.+..+++.|++.  +.+++|++..+....... ..  ......+.....          
T Consensus         1 ~~i~i~G~-~--g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   77 (426)
T PRK10017          1 MKLLILGN-H--TCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVK   77 (426)
T ss_pred             CeEEEEcc-c--cCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCccchhhhcccccccchhhhhhhhcccccccchhHH
Confidence            78888874 3  346789999999999999988  578999988775433110 00  000000000000          


Q ss_pred             -----------------ccCc---chhHHHHHHHHHHhcCCCCCcEEEeCCcch----------H---HhhhccCCcEEE
Q 011355          142 -----------------AAGY---LDQSIVWQQLQTQNSTGKPFDVIHTESVGL----------R---HTRARNLTNVVV  188 (488)
Q Consensus       142 -----------------~~~~---~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~----------~---~~~~~~~p~~v~  188 (488)
                                       ..+.   ......+..+.+..+   +.|+++.-+..+          .   .....+.| ++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkp-v~l  153 (426)
T PRK10017         78 KVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLS---GYDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKP-LYM  153 (426)
T ss_pred             HHHHhhhhHHHHHhhhccccccccccchhhHHHHHHHHH---hCCEEEECCCCccccCcccHHHHHHHHHHHcCCC-EEE
Confidence                             0000   011111222222221   789998864211          1   11112334 555


Q ss_pred             eeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCcc
Q 011355          189 SWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVD  268 (488)
Q Consensus       189 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd  268 (488)
                      .-+++.+.                  .....+.+.+     ..++++|.|.+--+...+.+.+ .|++..++.+.+..+-
T Consensus       154 ~gqsiGPf------------------~~~~~r~l~r-----~vl~~~~~ItvRD~~S~~~Lk~-lGv~~~~v~~~aDpAF  209 (426)
T PRK10017        154 IGHSVGPF------------------QDEQFNQLAN-----YVFGHCDALILRESVSLDLMKR-SNITTAKVEHGVDTAW  209 (426)
T ss_pred             ECCcCCCc------------------CCHHHHHHHH-----HHHhcCCEEEEccHHHHHHHHH-hCCCccceEEecChhh
Confidence            55554221                  1222232322     4578999999999999999887 7998778888765431


Q ss_pred             CCCcCCCc-ccchhhhhhhCCCCCCcEEEEEEeeeccc-c-------Ch-HHHHHHHHHhHhhccCCCCCeEEEEE--eC
Q 011355          269 EEVFKPDV-AMGKDFKKKFGIPENRSLVLGMAGRLVKD-K-------GH-PLMFEALKQLLAENDTFRRSTVFLVA--GD  336 (488)
Q Consensus       269 ~~~~~~~~-~~~~~~r~~~~i~~~~~~~i~~~Grl~~~-K-------g~-~~ll~a~~~l~~~~~~~~~~~~l~iv--G~  336 (488)
                      .-...... .....+...++.+..++.+-+.+..+.+. +       .. ..+.+++..+.+++    -++.|+-.  |.
T Consensus       210 ~L~~~~~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g----~~Vv~lp~~~~~  285 (426)
T PRK10017        210 LVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEG----YQVIALSTCTGI  285 (426)
T ss_pred             hCCccccccccchhhhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCC----CeEEEEecccCc
Confidence            11100000 00011112222223332333333433211 1       11 34456666665544    44444322  10


Q ss_pred             ---CCchhH-Hhh----hC--CcEE-EeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc
Q 011355          337 ---GPWGAR-YRD----LG--TNVI-VLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG  405 (488)
Q Consensus       337 ---g~~~~~-~~~----l~--~~V~-~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~  405 (488)
                         ++.... .++    +.  .+++ +.+..+..|+..++++||++|..-++      .++=|++.|+|+|+-....=..
T Consensus       286 ~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH------a~I~a~~~gvP~i~i~Y~~K~~  359 (426)
T PRK10017        286 DSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH------SAIISMNFGTPAIAINYEHKSA  359 (426)
T ss_pred             cCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch------HHHHHHHcCCCEEEeeehHHHH
Confidence               121111 122    22  2333 34445677899999999999985543      6788999999999975532111


Q ss_pred             ceeec-CCceeEeC--C-CHHHHHHHHHHHHhcCHHHHHH
Q 011355          406 SVIVG-TDMGYLFS--P-QVESVKKALYGIWADGREVLEK  441 (488)
Q Consensus       406 e~v~~-~~~g~l~~--~-d~~~la~~i~~ll~~~~~~~~~  441 (488)
                      .++.+ +...++++  . +.+++.+.+.+++++ .+.+++
T Consensus       360 ~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~-r~~~~~  398 (426)
T PRK10017        360 GIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ-LPALNA  398 (426)
T ss_pred             HHHHHcCCccEEechhhCCHHHHHHHHHHHHhC-HHHHHH
Confidence            22221 12223333  3 688999999999999 544443

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=98.86  E-value=5.1e-07  Score=89.53  Aligned_cols=314  Identities=12%  Similarity=0.085  Sum_probs=171.9

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC--C--CCCceEEEecCCCCccCcchhHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFP--T--YPISSLYFHLSKPTAAGYLDQSIVW  152 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~--~~~~~i~~~~~~~~~~~~~~~~~~~  152 (488)
                      -||.+++.      ..+| ..+...|+++|+++.-++.+...+.+.-...  +  .....+.+.....-........+..
T Consensus       227 ~kIfI~AG------E~SG-DlhgA~Li~aLk~~~P~i~~~GvGG~~M~aaG~e~l~d~~eLsVmG~~EVL~~l~~l~~~~  299 (608)
T PRK01021        227 TSCFISAG------EHSG-DTLGGNLLKEIKALYPDIHCFGVGGPQMRAEGFHPLFNMEEFQVSGFWEVLLALFKLWYRY  299 (608)
T ss_pred             CeEEEEec------cccH-HHHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCcccCChHHhhhhhHHHHHHHHHHHHHHH
Confidence            48888875      4445 4566799999999877788776654321110  0  1111111110000001122233344


Q ss_pred             HHHHHHhcCCCCCcEEEeCC-cchHHhhh-----ccC--CcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHH
Q 011355          153 QQLQTQNSTGKPFDVIHTES-VGLRHTRA-----RNL--TNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASK  224 (488)
Q Consensus       153 ~~~~~~~~~~~~~Dvv~~~~-~~~~~~~~-----~~~--p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (488)
                      +++.+...+. +||++++-+ +++...++     .++  | +++.+-   +.     .+.+    .     ..-.+.+. 
T Consensus       300 ~~l~~~i~~~-kPD~vIlID~PgFNlrLAK~lkk~Gi~ip-viyYVs---Pq-----VWAW----R-----~~Rikki~-  359 (608)
T PRK01021        300 RKLYKTILKT-NPRTVICIDFPDFHFLLIKKLRKRGYKGK-IVHYVC---PS-----IWAW----R-----PKRKTILE-  359 (608)
T ss_pred             HHHHHHHHhc-CCCEEEEeCCCCCCHHHHHHHHhcCCCCC-EEEEEC---cc-----ceee----C-----cchHHHHH-
Confidence            4444444444 899999854 33322222     221  3 332221   11     1100    0     11112222 


Q ss_pred             HHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecc
Q 011355          225 VVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVK  304 (488)
Q Consensus       225 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~  304 (488)
                              +.+|+++|+=+...+.+++ +|+   +++.++|+.-.. ... ..++.+.++++|++++++.+.+..|+-..
T Consensus       360 --------k~vD~ll~IfPFE~~~y~~-~gv---~v~yVGHPL~d~-i~~-~~~~~~~r~~lgl~~~~~iIaLLPGSR~~  425 (608)
T PRK01021        360 --------KYLDLLLLILPFEQNLFKD-SPL---RTVYLGHPLVET-ISS-FSPNLSWKEQLHLPSDKPIVAAFPGSRRG  425 (608)
T ss_pred             --------HHhhhheecCccCHHHHHh-cCC---CeEEECCcHHhh-ccc-CCCHHHHHHHcCCCCCCCEEEEECCCCHH
Confidence                    3457779999999999988 665   467888876222 211 22335679999998777677778886432


Q ss_pred             --ccChHHHHHHHH--HhHhhccCCCCCeEEEEEeCCCc-hhHHhhhC-----CcEEEeCccCHHHHHHHHHhcCEEEeC
Q 011355          305 --DKGHPLMFEALK--QLLAENDTFRRSTVFLVAGDGPW-GARYRDLG-----TNVIVLGPLDQTRLAMFYNAIDIFVNP  374 (488)
Q Consensus       305 --~Kg~~~ll~a~~--~l~~~~~~~~~~~~l~ivG~g~~-~~~~~~l~-----~~V~~~g~v~~~~l~~~~~~adv~v~p  374 (488)
                        .+..+.+++|++  .+.       ++.++++....+. .+.+++.-     ..+.+...   ++-.+++++||+.+..
T Consensus       426 EI~rllPv~l~aa~~~~l~-------~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~---~~~~~~m~aaD~aLaa  495 (608)
T PRK01021        426 DILRNLTIQVQAFLASSLA-------STHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPS---QFRYELMRECDCALAK  495 (608)
T ss_pred             HHHHHHHHHHHHHHHHHhc-------cCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecC---cchHHHHHhcCeeeec
Confidence              366778888887  443       4567766543332 23333321     12333321   1236999999999986


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEEe-CCCCccc-----------------ceeecCC-ceeEe---CC-CHHHHHHHHHHH
Q 011355          375 TLRAQGLDHTVLEAMLSGKPLMAT-RLASIVG-----------------SVIVGTD-MGYLF---SP-QVESVKKALYGI  431 (488)
Q Consensus       375 s~~~eg~~~~~lEAma~G~PVI~~-~~~~~~~-----------------e~v~~~~-~g~l~---~~-d~~~la~~i~~l  431 (488)
                      |      |.+.+|++.+|+|.|+. ..+...-                 .++.+.+ .--++   +. +++.+++++ ++
T Consensus       496 S------GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~l  568 (608)
T PRK01021        496 C------GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DI  568 (608)
T ss_pred             C------CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HH
Confidence            6      67999999999999885 2221110                 1111111 11123   23 799999996 88


Q ss_pred             HhcCHHHHHHHHHHHHHH
Q 011355          432 WADGREVLEKKGLVARKR  449 (488)
Q Consensus       432 l~~~~~~~~~~~~~a~~~  449 (488)
                      +.| ++.++++.+...+.
T Consensus       569 L~d-~~~r~~~~~~l~~l  585 (608)
T PRK01021        569 LKT-SQSKEKQKDACRDL  585 (608)
T ss_pred             hcC-HHHHHHHHHHHHHH
Confidence            887 66666665554433

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=98.71  E-value=4.7e-07  Score=74.62  Aligned_cols=132  Identities=20%  Similarity=0.137  Sum_probs=76.2

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQT  157 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  157 (488)
                      ||++++...         +.++.++++.|.++||||++++........  ....++.+................ ..+.+
T Consensus         1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~~~~--~~~~~i~~~~~~~~~k~~~~~~~~-~~l~k   68 (139)
T PF13477_consen    1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDYEKY--EIIEGIKVIRLPSPRKSPLNYIKY-FRLRK   68 (139)
T ss_pred             CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCchhh--hHhCCeEEEEecCCCCccHHHHHH-HHHHH
Confidence            688888622         457889999999999999999996543222  112233332222112123444433 35555


Q ss_pred             HhcCCCCCcEEEeCCcc---hHHhhh---cc-CCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhh
Q 011355          158 QNSTGKPFDVIHTESVG---LRHTRA---RN-LTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVK  230 (488)
Q Consensus       158 ~~~~~~~~Dvv~~~~~~---~~~~~~---~~-~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (488)
                      ..++. +||+||+|...   +.+.++   .+ .| ++++.||.... .          .+  .. ..+.+.+.+     .
T Consensus        69 ~ik~~-~~DvIh~h~~~~~~~~~~l~~~~~~~~~-~i~~~hg~~~~-~----------~~--~~-~~~~~~~~~-----~  127 (139)
T PF13477_consen   69 IIKKE-KPDVIHCHTPSPYGLFAMLAKKLLKNKK-VIYTVHGSDFY-N----------SS--KK-KKLKKFIIK-----F  127 (139)
T ss_pred             HhccC-CCCEEEEecCChHHHHHHHHHHHcCCCC-EEEEecCCeee-c----------CC--ch-HHHHHHHHH-----H
Confidence            55555 89999999743   222222   23 45 99999985331 1          00  00 112333333     4


Q ss_pred             hcCCccEEEEcC
Q 011355          231 FFPKYAHHVATS  242 (488)
Q Consensus       231 ~~~~~d~ii~~S  242 (488)
                      +++++|.+++.|
T Consensus       128 ~~k~~~~ii~~~  139 (139)
T PF13477_consen  128 AFKRADKIIVQS  139 (139)
T ss_pred             HHHhCCEEEEcC
Confidence            567899999876

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.70  E-value=8.8e-06  Score=72.79  Aligned_cols=292  Identities=14%  Similarity=0.125  Sum_probs=162.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--CCCceEEEecCCCCccCcc-hhHHHH-
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT--YPISSLYFHLSKPTAAGYL-DQSIVW-  152 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~-~~~~~~-  152 (488)
                      |||.|-..+-|       .-++..++...|.++||+|.+.|...+......  .+.+...+  .+....... ...... 
T Consensus         1 mkVwiDI~n~~-------hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~I--gk~g~~tl~~Kl~~~~e   71 (346)
T COG1817           1 MKVWIDIGNPP-------HVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSI--GKHGGVTLKEKLLESAE   71 (346)
T ss_pred             CeEEEEcCCcc-------hhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEee--cccCCccHHHHHHHHHH
Confidence            57666654322       257889999999999999999998765443322  23322222  121100111 111111 


Q ss_pred             --HHHHHHhcCCCCCcEEEe-CCcchHHh-hhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHH
Q 011355          153 --QQLQTQNSTGKPFDVIHT-ESVGLRHT-RARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEE  228 (488)
Q Consensus       153 --~~~~~~~~~~~~~Dvv~~-~~~~~~~~-~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (488)
                        ..+.+...+. +||+.+. |++.++.. ...++| .+.....-     |.                ....+       
T Consensus        72 R~~~L~ki~~~~-kpdv~i~~~s~~l~rvafgLg~p-sIi~~D~e-----hA----------------~~qnk-------  121 (346)
T COG1817          72 RVYKLSKIIAEF-KPDVAIGKHSPELPRVAFGLGIP-SIIFVDNE-----HA----------------EAQNK-------  121 (346)
T ss_pred             HHHHHHHHHhhc-CCceEeecCCcchhhHHhhcCCc-eEEecCCh-----hH----------------HHHhh-------
Confidence              2223333344 8999886 45544433 233445 33332210     00                11111       


Q ss_pred             hhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccC----CCcCCCcccchhhhhhhCCCCCCcEEEEEEee---
Q 011355          229 VKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDE----EVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR---  301 (488)
Q Consensus       229 ~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~----~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr---  301 (488)
                       ..+.-|+.++.++....+.+.+ +|-++.++. -+||+-.    ..|.++    .++-+++|+..+.+++++=.-.   
T Consensus       122 -l~~Pla~~ii~P~~~~~~~~~~-~G~~p~~i~-~~~giae~~~v~~f~pd----~evlkeLgl~~~~~yIVmRpe~~~A  194 (346)
T COG1817         122 -LTLPLADVIITPEAIDEEELLD-FGADPNKIS-GYNGIAELANVYGFVPD----PEVLKELGLEEGETYIVMRPEPWGA  194 (346)
T ss_pred             -cchhhhhheecccccchHHHHH-hCCCcccee-cccceeEEeecccCCCC----HHHHHHcCCCCCCceEEEeeccccc
Confidence             2345567778887777777766 787766654 3456432    224333    5678899999876565542222   


Q ss_pred             --eccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc-hhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          302 --LVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW-GARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       302 --l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~-~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                        ...+++++.+.+++..+.+        .-.+++.+... ++..+... +++....+  -+-.+++-.|++++.     
T Consensus       195 ~y~~g~~~~~~~~~li~~l~k--------~giV~ipr~~~~~eife~~~-n~i~pk~~--vD~l~Llyya~lvig-----  258 (346)
T COG1817         195 HYDNGDRGISVLPDLIKELKK--------YGIVLIPREKEQAEIFEGYR-NIIIPKKA--VDTLSLLYYATLVIG-----  258 (346)
T ss_pred             eeeccccchhhHHHHHHHHHh--------CcEEEecCchhHHHHHhhhc-cccCCccc--ccHHHHHhhhheeec-----
Confidence              1335666677777777754        22566665433 33333332 33222221  133346777888874     


Q ss_pred             CCCChHHHHHHHcCCcEEEeCCC---CcccceeecCCceeEeCC-CHHHHHHHHHHHHhc
Q 011355          379 QGLDHTVLEAMLSGKPLMATRLA---SIVGSVIVGTDMGYLFSP-QVESVKKALYGIWAD  434 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~~~---~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~  434 (488)
                      +| |...-||...|+|.|++.-|   +.. +..  -+.|.++.. |+.+..+...+.+.+
T Consensus       259 ~g-gTMarEaAlLGtpaIs~~pGkll~vd-k~l--ie~G~~~~s~~~~~~~~~a~~~l~~  314 (346)
T COG1817         259 AG-GTMAREAALLGTPAISCYPGKLLAVD-KYL--IEKGLLYHSTDEIAIVEYAVRNLKY  314 (346)
T ss_pred             CC-chHHHHHHHhCCceEEecCCcccccc-HHH--HhcCceeecCCHHHHHHHHHHHhhc
Confidence            33 66889999999999998733   122 222  156788886 888777777777766

>PLN02448 UDP-glycosyltransferase family protein

Probab=98.66  E-value=0.00012  Score=72.94  Aligned_cols=202  Identities=16%  Similarity=0.072  Sum_probs=105.1

Q ss_pred             hcCCccEEEEcChh-hHHHHHHHhcC-CCCcEEEecCCccCCCcC---C---CcccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          231 FFPKYAHHVATSDH-CGDVLKRIYMI-PEERVHVILNGVDEEVFK---P---DVAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       231 ~~~~~d~ii~~S~~-~~~~~~~~~g~-~~~~i~vi~ngvd~~~~~---~---~~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      ...+++.|++.|-+ ....+.+.+.- -..++..|..-+......   .   ......++.+-+.-.+.++.+.+..|+.
T Consensus       205 ~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~  284 (459)
T PLN02448        205 WVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSF  284 (459)
T ss_pred             hcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeeccc
Confidence            35678899998876 32232332310 012455555433211100   0   0000012333333333444777788886


Q ss_pred             ccc--cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh-hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCC
Q 011355          303 VKD--KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ  379 (488)
Q Consensus       303 ~~~--Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~e  379 (488)
                      ...  +-+..++++++..         +..++++..++. ..+.+ ..+++.+.+++|+.+   ++...++..+-++  -
T Consensus       285 ~~~~~~~~~~~~~~l~~~---------~~~~lw~~~~~~-~~~~~~~~~~~~v~~w~pQ~~---iL~h~~v~~fvtH--g  349 (459)
T PLN02448        285 LSVSSAQMDEIAAGLRDS---------GVRFLWVARGEA-SRLKEICGDMGLVVPWCDQLK---VLCHSSVGGFWTH--C  349 (459)
T ss_pred             ccCCHHHHHHHHHHHHhC---------CCCEEEEEcCch-hhHhHhccCCEEEeccCCHHH---HhccCccceEEec--C
Confidence            432  2233344444332         345555544331 12323 336788889999776   4556666333342  3


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCCccc---ceeecC-CceeEeC-------C-CHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLASIVG---SVIVGT-DMGYLFS-------P-QVESVKKALYGIWADGREVLEKKGLVAR  447 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~-~~g~l~~-------~-d~~~la~~i~~ll~~~~~~~~~~~~~a~  447 (488)
                      | -++++||+++|+|+|+-...+-..   ..+.+. +.|+-+.       . +.+++++++.+++.++.++-++|++++.
T Consensus       350 G-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~  428 (459)
T PLN02448        350 G-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAK  428 (459)
T ss_pred             c-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence            4 458999999999999976543110   223332 3455542       2 7899999999999862233444444444


Q ss_pred             H
Q 011355          448 K  448 (488)
Q Consensus       448 ~  448 (488)
                      +
T Consensus       429 ~  429 (459)
T PLN02448        429 E  429 (459)
T ss_pred             H
Confidence            3

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=98.64  E-value=7.1e-06  Score=74.65  Aligned_cols=316  Identities=17%  Similarity=0.143  Sum_probs=168.0

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCC-CCCceEEEecCCCCccCcc-----
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKR--GHELHIFTASCLNCSFPT-YPISSLYFHLSKPTAAGYL-----  146 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~-----  146 (488)
                      +.|||++-+.+    ...=|.-+.+..++++|.+.  |.+|.+++.......... .++..+.++.......+.+     
T Consensus         8 ~~~Ri~~Yshd----~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd~V~LPsl~k~~~G~~~~~d~   83 (400)
T COG4671           8 KRPRILFYSHD----LLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVDFVKLPSLIKGDNGEYGLVDL   83 (400)
T ss_pred             ccceEEEEehh----hccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCceEecCceEecCCCceeeeec
Confidence            45699999862    23447778889999999998  999999998876555544 5555555553322111111     


Q ss_pred             -----hhHHHHHHHHHHhcCCCCCcEEEeCCcc----------hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCC
Q 011355          147 -----DQSIVWQQLQTQNSTGKPFDVIHTESVG----------LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPE  211 (488)
Q Consensus       147 -----~~~~~~~~~~~~~~~~~~~Dvv~~~~~~----------~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~  211 (488)
                           .......+++....+..+||++++....          +....... ++.+.-+.++      .+.++..   ..
T Consensus        84 ~~~l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~-t~~vL~lr~i------~D~p~~~---~~  153 (400)
T COG4671          84 DGDLEETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTG-TRLVLGLRSI------RDIPQEL---EA  153 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcC-CcceeehHhh------hhchhhh---cc
Confidence                 1111112222222222399999998632          11222222 2233333222      1111111   00


Q ss_pred             ChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCC-cEEEecCCccCCCcCCCcccchhhhhhhCCCC
Q 011355          212 EPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEE-RVHVILNGVDEEVFKPDVAMGKDFKKKFGIPE  290 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~-~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~  290 (488)
                      ..........+.         +.+|.|.+..+-.-..+.+-|++.+. +-.+.+.|+=....+..+....+     + ++
T Consensus       154 ~w~~~~~~~~I~---------r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~~~-----~-pE  218 (400)
T COG4671         154 DWRRAETVRLIN---------RFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPPHE-----A-PE  218 (400)
T ss_pred             chhhhHHHHHHH---------HhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCCcC-----C-Cc
Confidence            001112222333         34678888776655555555654321 23344444421111111100000     0 23


Q ss_pred             CCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeE---EEEEeCC-Cc--hhHHhhhC---CcEEEeCccCHHHH
Q 011355          291 NRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTV---FLVAGDG-PW--GARYRDLG---TNVIVLGPLDQTRL  361 (488)
Q Consensus       291 ~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~---l~ivG~g-~~--~~~~~~l~---~~V~~~g~v~~~~l  361 (488)
                      +. .+++.+|.  ..-|-+++..+++. ....    +++.   ++|.|.- |.  .+.+...+   ++|.+..+  .+++
T Consensus       219 ~~-~Ilvs~GG--G~dG~eLi~~~l~A-~~~l----~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f--~~~~  288 (400)
T COG4671         219 GF-DILVSVGG--GADGAELIETALAA-AQLL----AGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEF--RNDF  288 (400)
T ss_pred             cc-eEEEecCC--ChhhHHHHHHHHHH-hhhC----CCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEh--hhhH
Confidence            33 67778773  34554444433333 2222    3333   4555632 21  22333322   78999999  7799


Q ss_pred             HHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceee-------cCCceeEeCC--CHHHHHHHHHHHH
Q 011355          362 AMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIV-------GTDMGYLFSP--QVESVKKALYGIW  432 (488)
Q Consensus       362 ~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~-------~~~~g~l~~~--d~~~la~~i~~ll  432 (488)
                      ..++..|+..|.-+    |+ +++.|-+++|||.+.-....-.+|...       =|-...+.+.  +++.|+++|...+
T Consensus       289 ~~ll~gA~~vVSm~----GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l  363 (400)
T COG4671         289 ESLLAGARLVVSMG----GY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAAL  363 (400)
T ss_pred             HHHHHhhheeeecc----cc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcc
Confidence            99999999999633    43 589999999999988766554433221       1223444444  7899999999988


Q ss_pred             hc
Q 011355          433 AD  434 (488)
Q Consensus       433 ~~  434 (488)
                      +.
T Consensus       364 ~~  365 (400)
T COG4671         364 AR  365 (400)
T ss_pred             cC
Confidence            84

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.56  E-value=2.9e-06  Score=74.68  Aligned_cols=286  Identities=15%  Similarity=0.156  Sum_probs=144.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      |||+|++...+.  ...|.-.+...|+++|.+.|..+..++.+........ ...........    .. +         
T Consensus         1 M~V~i~~Dgg~~--iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~-~~~~f~~~~~~----~~-n---------   63 (318)
T COG3980           1 MKVLIRCDGGLE--IGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHK-VYEGFKVLEGR----GN-N---------   63 (318)
T ss_pred             CcEEEEecCCcc--cCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhh-hhhhccceeee----cc-c---------
Confidence            899999987754  5667778899999999999988888887653221100 00011111000    00 0         


Q ss_pred             HHhcCCCCCcEEEeCCcchHHhhhccC----CcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhc
Q 011355          157 TQNSTGKPFDVIHTESVGLRHTRARNL----TNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFF  232 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~~~~~~~~~----p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (488)
                       ..+.. ++|++++.++++..=..+.+    ...+..+.+...                    +.+.             
T Consensus        64 -~ik~~-k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~--------------------~~~~-------------  108 (318)
T COG3980          64 -LIKEE-KFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENA--------------------KSFK-------------  108 (318)
T ss_pred             -ccccc-cCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCc--------------------cchh-------------
Confidence             12222 89999999876543332221    112233322110                    0000             


Q ss_pred             CCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHH
Q 011355          233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMF  312 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll  312 (488)
                       ..|  ..++.... .. ++|+.-+.+..+ .-|.+.....+.   -...|++.-..+.+ -+++..|.- ..||+  .+
T Consensus       109 -d~d--~ivN~~~~-a~-~~y~~v~~k~~~-~lGp~y~~lr~e---F~~~r~~~~~r~~r-~ilI~lGGs-Dpk~l--t~  175 (318)
T COG3980         109 -DND--LIVNAILN-AN-DYYGLVPNKTRY-YLGPGYAPLRPE---FYALREENTERPKR-DILITLGGS-DPKNL--TL  175 (318)
T ss_pred             -hhH--hhhhhhhc-ch-hhccccCcceEE-EecCCceeccHH---HHHhHHHHhhcchh-eEEEEccCC-Chhhh--HH
Confidence             001  11111111 11 224544445433 234332222111   11222222111122 245566643 44555  77


Q ss_pred             HHHHHhHhhccCCCCCeEEEEEeCC-CchhHHhh---hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHH
Q 011355          313 EALKQLLAENDTFRRSTVFLVAGDG-PWGARYRD---LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEA  388 (488)
Q Consensus       313 ~a~~~l~~~~~~~~~~~~l~ivG~g-~~~~~~~~---l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEA  388 (488)
                      +.++.+.+..    -++++ ++|++ |....+.+   ..+++.+.-.  .+++.+++..||..|..     + |.++.||
T Consensus       176 kvl~~L~~~~----~nl~i-V~gs~~p~l~~l~k~~~~~~~i~~~~~--~~dma~LMke~d~aI~A-----a-GstlyEa  242 (318)
T COG3980         176 KVLAELEQKN----VNLHI-VVGSSNPTLKNLRKRAEKYPNINLYID--TNDMAELMKEADLAISA-----A-GSTLYEA  242 (318)
T ss_pred             HHHHHhhccC----eeEEE-EecCCCcchhHHHHHHhhCCCeeeEec--chhHHHHHHhcchheec-----c-chHHHHH
Confidence            8888887643    23333 34533 33333332   3478877766  67999999999999862     2 6799999


Q ss_pred             HHcCCcEEEe----CCCCcccceee----cCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHH
Q 011355          389 MLSGKPLMAT----RLASIVGSVIV----GTDMGYLFSPQVESVKKALYGIWADGREVLEKKGL  444 (488)
Q Consensus       389 ma~G~PVI~~----~~~~~~~e~v~----~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~  444 (488)
                      +..|+|.++-    +--... ..+.    ..+.|+-.  ..+.....+.++.+| ...+..+..
T Consensus       243 ~~lgvP~l~l~~a~NQ~~~a-~~f~~lg~~~~l~~~l--~~~~~~~~~~~i~~d-~~~rk~l~~  302 (318)
T COG3980         243 LLLGVPSLVLPLAENQIATA-KEFEALGIIKQLGYHL--KDLAKDYEILQIQKD-YARRKNLSF  302 (318)
T ss_pred             HHhcCCceEEeeeccHHHHH-HHHHhcCchhhccCCC--chHHHHHHHHHhhhC-HHHhhhhhh
Confidence            9999994332    211111 1111    11223222  356666777777777 666655543

>PLN03007 UDP-glucosyltransferase family protein

Probab=98.43  E-value=0.0028  Score=63.61  Aligned_cols=141  Identities=16%  Similarity=0.133  Sum_probs=78.1

Q ss_pred             hhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc--------hhHHhh--hCCcEE
Q 011355          282 FKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW--------GARYRD--LGTNVI  351 (488)
Q Consensus       282 ~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~--------~~~~~~--l~~~V~  351 (488)
                      +.+-+.-.++++.+.+..|+.... ..+.+.+.+..+....    -++- ..++....        .+.+.+  ...++.
T Consensus       275 ~~~wLd~~~~~svvyvsfGS~~~~-~~~~~~~~~~~l~~~~----~~fl-w~~~~~~~~~~~~~~lp~~~~~r~~~~g~~  348 (482)
T PLN03007        275 CLKWLDSKKPDSVIYLSFGSVASF-KNEQLFEIAAGLEGSG----QNFI-WVVRKNENQGEKEEWLPEGFEERTKGKGLI  348 (482)
T ss_pred             HHHHHhcCCCCceEEEeecCCcCC-CHHHHHHHHHHHHHCC----CCEE-EEEecCCcccchhhcCCHHHHHHhccCCEE
Confidence            344444334445778888887432 1223444444443322    2333 33443110        111111  246889


Q ss_pred             EeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeec-CCceeEe----------
Q 011355          352 VLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVG-TDMGYLF----------  417 (488)
Q Consensus       352 ~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~-~~~g~l~----------  417 (488)
                      +.+++|+.   ++|+.+++-.+-++  -| -++++||+.+|+|+|+-...+-..   ..+.+ -+.|+-+          
T Consensus       349 v~~w~PQ~---~iL~h~~v~~fvtH--~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~  422 (482)
T PLN03007        349 IRGWAPQV---LILDHQATGGFVTH--CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKG  422 (482)
T ss_pred             EecCCCHH---HHhccCccceeeec--Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccccccc
Confidence            99999975   56777777444343  34 358999999999999976533110   11111 1223322          


Q ss_pred             CC-CHHHHHHHHHHHHhc
Q 011355          418 SP-QVESVKKALYGIWAD  434 (488)
Q Consensus       418 ~~-d~~~la~~i~~ll~~  434 (488)
                      +. +.+++++++.+++.+
T Consensus       423 ~~~~~~~l~~av~~~m~~  440 (482)
T PLN03007        423 DFISREKVEKAVREVIVG  440 (482)
T ss_pred             CcccHHHHHHHHHHHhcC
Confidence            22 789999999999987

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=98.39  E-value=0.00011  Score=66.45  Aligned_cols=208  Identities=14%  Similarity=0.164  Sum_probs=121.4

Q ss_pred             hcCCccEEEEcChhhHHHH-HHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEee-eccccCh
Q 011355          231 FFPKYAHHVATSDHCGDVL-KRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR-LVKDKGH  308 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~-~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr-l~~~Kg~  308 (488)
                      ..++..++++ +......+ ++.++++.+ ....|.-.+... .....++         .+.++++| .+|+ -++..++
T Consensus        95 aq~rvg~v~a-trGD~~~~a~~~~~v~~~-llyfpt~m~~~l-~~~~~~~---------~~~~~~tI-lvGNSgd~SN~H  161 (322)
T PRK02797         95 AQKRVGHVFA-TRGDLSYFAQRHPKVPGS-LLYFPTRMDPSL-NTMANDR---------QRAGKMTI-LVGNSGDRSNRH  161 (322)
T ss_pred             HHhhcCeEEE-ecchHHHHHHhcCCCCcc-EEecCCcchhhh-ccccccc---------cCCCceEE-EEeCCCCCcccH
Confidence            3467888899 66666764 455666543 322222222211 1111000         12233666 4565 4667777


Q ss_pred             HHHHHHHHHhHhhccCCCCCeEEEEE-eC--CC--chhHHhh-----hC-CcEEE-eCccCHHHHHHHHHhcCEEEeCCC
Q 011355          309 PLMFEALKQLLAENDTFRRSTVFLVA-GD--GP--WGARYRD-----LG-TNVIV-LGPLDQTRLAMFYNAIDIFVNPTL  376 (488)
Q Consensus       309 ~~ll~a~~~l~~~~~~~~~~~~l~iv-G~--g~--~~~~~~~-----l~-~~V~~-~g~v~~~~l~~~~~~adv~v~ps~  376 (488)
                      -.+++++++...      .++++++- |-  |.  +.++.++     .+ +++.. ..+++-+|..++++.||+.++.-.
T Consensus       162 ie~L~~l~~~~~------~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~  235 (322)
T PRK02797        162 IEALRALHQQFG------DNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFA  235 (322)
T ss_pred             HHHHHHHHHHhC------CCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeec
Confidence            666666655533      57777654 33  22  1222222     23 56665 468899999999999999888766


Q ss_pred             CCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhh
Q 011355          377 RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKKGLVARKRGLNL  453 (488)
Q Consensus       377 ~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~  453 (488)
                      +-+|+| +++=.+..|+||+.+.....-.++.+ .+.-++++.   |...+.+           ..+++...-++.+.  
T Consensus       236 RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e-~gv~Vlf~~d~L~~~~v~e-----------~~rql~~~dk~~I~--  300 (322)
T PRK02797        236 RQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTE-QGLPVLFTGDDLDEDIVRE-----------AQRQLASVDKNIIA--  300 (322)
T ss_pred             hhhHHh-HHHHHHHCCCcEEEecCCchHHHHHh-CCCeEEecCCcccHHHHHH-----------HHHHHHhhCcceee--
Confidence            668988 56669999999998854443324433 333344443   3333322           22333344444443  


Q ss_pred             CCHHHHHHHHHHHHHHhhc
Q 011355          454 FTATKMAAAYERLFLCISN  472 (488)
Q Consensus       454 fs~~~~~~~~~~~~~~~~~  472 (488)
                      |+.++..+.+.+++....+
T Consensus       301 Ff~pn~~~~W~~~l~~~~g  319 (322)
T PRK02797        301 FFSPNYLQGWRNALAIAAG  319 (322)
T ss_pred             ecCHhHHHHHHHHHHHhhC
Confidence            9999999999999987665

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=98.35  E-value=3.1e-06  Score=80.01  Aligned_cols=128  Identities=14%  Similarity=0.107  Sum_probs=76.2

Q ss_pred             ccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecc--ccChHHHH
Q 011355          235 YAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVK--DKGHPLMF  312 (488)
Q Consensus       235 ~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~--~Kg~~~ll  312 (488)
                      +|++.+.=+...+.+    |+   ++.+++|++-.. ....       ++.  ++++ +.+.++.|+-..  .+....++
T Consensus       128 ~d~vl~ifPFE~~~y----g~---~~~~VGhPl~d~-~~~~-------~~~--~~~~-~~I~llPGSR~~Ei~~llP~~~  189 (347)
T PRK14089        128 CDFLASILPFEVQFY----QS---KATYVGHPLLDE-IKEF-------KKD--LDKE-GTIAFMPGSRKSEIKRLMPIFK  189 (347)
T ss_pred             HhhhhccCCCCHHHh----CC---CCEEECCcHHHh-hhhh-------hhh--cCCC-CEEEEECCCCHHHHHHHHHHHH
Confidence            344455545544443    43   456888875322 1111       111  2223 366667776532  25566777


Q ss_pred             HHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh-hC--CcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHH
Q 011355          313 EALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-LG--TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAM  389 (488)
Q Consensus       313 ~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-l~--~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAm  389 (488)
                      +++.++.++      ...+++.|.... +.+++ ..  ..+.+.+     +..++|+.||+.+..|      |.+.+|++
T Consensus       190 ~aa~~L~~~------~~~~~i~~a~~~-~~i~~~~~~~~~~~~~~-----~~~~~m~~aDlal~~S------GT~TLE~a  251 (347)
T PRK14089        190 ELAKKLEGK------EKILVVPSFFKG-KDLKEIYGDISEFEISY-----DTHKALLEAEFAFICS------GTATLEAA  251 (347)
T ss_pred             HHHHHHhhc------CcEEEEeCCCcH-HHHHHHHhcCCCcEEec-----cHHHHHHhhhHHHhcC------cHHHHHHH
Confidence            888888753      257777776443 33333 21  2444442     4568999999999755      55777999


Q ss_pred             HcCCcEEEe
Q 011355          390 LSGKPLMAT  398 (488)
Q Consensus       390 a~G~PVI~~  398 (488)
                      .+|+|.|..
T Consensus       252 l~g~P~Vv~  260 (347)
T PRK14089        252 LIGTPFVLA  260 (347)
T ss_pred             HhCCCEEEE
Confidence            999999985

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=98.32  E-value=6.4e-06  Score=76.74  Aligned_cols=235  Identities=17%  Similarity=0.178  Sum_probs=143.6

Q ss_pred             HHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCccc---------------chhhhhhhCC
Q 011355          224 KVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAM---------------GKDFKKKFGI  288 (488)
Q Consensus       224 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~---------------~~~~r~~~~i  288 (488)
                      +..-+......|+.+.++|+-++-.....+.  .+.=.+.|||.+...|....+-               +..+.-.+++
T Consensus       242 rYC~ERaa~h~AhVFTTVSeITa~EAeHlLk--RKPD~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~GhlDF  319 (692)
T KOG3742|consen  242 RYCLERAAAHTAHVFTTVSEITALEAEHLLK--RKPDVITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFHGHLDF  319 (692)
T ss_pred             HHHHHHHhhhhhhhhhhHHHHHHHHHHHHHh--cCCCeeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence            3333444556777778888766544443332  2334688999998877543221               1112223445


Q ss_pred             CCCCcEEEEEEeeec-cccChHHHHHHHHHhHhhc---cCCCCC--eEEEEEeCCC------------chhHHhh-----
Q 011355          289 PENRSLVLGMAGRLV-KDKGHPLMFEALKQLLAEN---DTFRRS--TVFLVAGDGP------------WGARYRD-----  345 (488)
Q Consensus       289 ~~~~~~~i~~~Grl~-~~Kg~~~ll~a~~~l~~~~---~~~~~~--~~l~ivG~g~------------~~~~~~~-----  345 (488)
                      .-++.+.+..+||.+ ..||-+.+|+++++|.-..   ..  +.  +-|.|.....            ....+.+     
T Consensus       320 dLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s--~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~V  397 (692)
T KOG3742|consen  320 DLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGS--PKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNEV  397 (692)
T ss_pred             cccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCC--CceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHHH
Confidence            556668888999986 5799999999999875311   00  11  2334443210            0000000     


Q ss_pred             ------------------------------------------------------------h------------CCc--EE
Q 011355          346 ------------------------------------------------------------L------------GTN--VI  351 (488)
Q Consensus       346 ------------------------------------------------------------l------------~~~--V~  351 (488)
                                                                                  |            .++  |+
T Consensus       398 k~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKvi  477 (692)
T KOG3742|consen  398 KEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKVI  477 (692)
T ss_pred             HHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccceEEE
Confidence                                                                        0            122  44


Q ss_pred             EeC-cc------CHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCc---ccceeecC-CceeEe-C-
Q 011355          352 VLG-PL------DQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASI---VGSVIVGT-DMGYLF-S-  418 (488)
Q Consensus       352 ~~g-~v------~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~---~~e~v~~~-~~g~l~-~-  418 (488)
                      |.+ ++      =.-+..++.+.|++.|+||++ |.+|.+..|.-.+|+|-|+|+..|.   .+|.+.+. ..|+.+ + 
T Consensus       478 fHPEFLss~sPllglDYeeFVRGCHLGVFPSYY-EPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDR  556 (692)
T KOG3742|consen  478 FHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYY-EPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDR  556 (692)
T ss_pred             ecHHHhccCCCCcCCCHHHHhcccccccccccc-CCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEec
Confidence            543 11      123567889999999999985 9999999999999999999987764   23555443 345433 2 


Q ss_pred             ----C--CHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHhhhCCHHHHHHHHHH
Q 011355          419 ----P--QVESVKKALYGIWADGREVLEKKGL-VARKRGLNLFTATKMAAAYER  465 (488)
Q Consensus       419 ----~--d~~~la~~i~~ll~~~~~~~~~~~~-~a~~~~~~~fs~~~~~~~~~~  465 (488)
                          +  ++++|++-+.++...  ..++++-+ |--++..+..+|+.+..-|.+
T Consensus       557 Rfks~deSv~qL~~~m~~F~~q--sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~  608 (692)
T KOG3742|consen  557 RFKSPDESVQQLASFMYEFCKQ--SRRQRIIQRNRTERLSDLLDWKYLGRYYRK  608 (692)
T ss_pred             ccCChhhHHHHHHHHHHHHHHH--HHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence                2  578888888888876  44455444 344566677789887766543

>PLN02208 glycosyltransferase family protein

Probab=98.32  E-value=0.0045  Score=61.12  Aligned_cols=204  Identities=11%  Similarity=0.024  Sum_probs=110.6

Q ss_pred             hcCCccEEEEcChhhHH-HHHHHhcCC-CCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccCh
Q 011355          231 FFPKYAHHVATSDHCGD-VLKRIYMIP-EERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH  308 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~-~~~~~~g~~-~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~  308 (488)
                      .+.++|.+++.|-...+ .+.+.+.-+ ..++..|..-.....  .......++.+-++-.+++..+.+.+|+... -..
T Consensus       190 ~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~--~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~-l~~  266 (442)
T PLN02208        190 GLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD--TSKPLEEQWSHFLSGFPPKSVVFCSLGSQII-LEK  266 (442)
T ss_pred             hhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC--CCCCCHHHHHHHHhcCCCCcEEEEecccccc-CCH
Confidence            45689999998854433 333333211 135555554321110  0011123445555544444577888888753 233


Q ss_pred             HHHHHHHHHhHhhccCCCCCeEEEEEeC-C--Cchh----HHhh--hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCC
Q 011355          309 PLMFEALKQLLAENDTFRRSTVFLVAGD-G--PWGA----RYRD--LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ  379 (488)
Q Consensus       309 ~~ll~a~~~l~~~~~~~~~~~~l~ivG~-g--~~~~----~~~~--l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~e  379 (488)
                      +.+.+.+..+....    -+..+++--. +  ....    .+.+  .+.++.+.+|+|+.+   +++...+..+-++  -
T Consensus       267 ~q~~e~~~~l~~s~----~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~---iL~H~~v~~FvtH--c  337 (442)
T PLN02208        267 DQFQELCLGMELTG----LPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPL---ILDHPSIGCFVNH--C  337 (442)
T ss_pred             HHHHHHHHHHHhCC----CcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHH---HhcCCccCeEEcc--C
Confidence            44666655552222    2343444311 1  1111    1111  136888889999775   5667776555453  3


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCC----cccceeec-CCceeEeC------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLAS----IVGSVIVG-TDMGYLFS------PQVESVKKALYGIWADGREVLEKKGLVARK  448 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~-~~~g~l~~------~d~~~la~~i~~ll~~~~~~~~~~~~~a~~  448 (488)
                      |+ ++++||+++|+|+|+-..-+    .. ..+.+ -+.|..++      .+.++++++|.++++++.+..+++.+++++
T Consensus       338 G~-nS~~Eai~~GVP~l~~P~~~DQ~~na-~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~  415 (442)
T PLN02208        338 GP-GTIWESLVSDCQMVLIPFLSDQVLFT-RLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTK  415 (442)
T ss_pred             Cc-hHHHHHHHcCCCEEecCcchhhHHHH-HHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence            43 58999999999999975433    11 22222 35566553      167899999999998732444555555443

>PLN02210 UDP-glucosyl transferase

Probab=98.30  E-value=0.0053  Score=61.04  Aligned_cols=139  Identities=15%  Similarity=0.144  Sum_probs=79.3

Q ss_pred             hhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC---chhHHhhh--CCcEEEeCccCH
Q 011355          284 KKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP---WGARYRDL--GTNVIVLGPLDQ  358 (488)
Q Consensus       284 ~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~---~~~~~~~l--~~~V~~~g~v~~  358 (488)
                      +-++-.++++.+.+..|+.... ..+.+-+.+..+....    -.+-+ +++...   ..+.+++.  .++..+.+++|+
T Consensus       261 ~wld~~~~~svvyvsfGS~~~~-~~~~~~e~a~~l~~~~----~~flw-~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ  334 (456)
T PLN02210        261 EWLDKQARSSVVYISFGSMLES-LENQVETIAKALKNRG----VPFLW-VIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQ  334 (456)
T ss_pred             HHHhCCCCCceEEEEecccccC-CHHHHHHHHHHHHhCC----CCEEE-EEeCCccccchhhHHhhccCCCeEEEecCCH
Confidence            3333333444777788887432 2233444444444322    22322 334211   11223232  255567799997


Q ss_pred             HHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcc---cceeec-CCceeEeC------C-CHHHHHHH
Q 011355          359 TRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIV---GSVIVG-TDMGYLFS------P-QVESVKKA  427 (488)
Q Consensus       359 ~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~---~e~v~~-~~~g~l~~------~-d~~~la~~  427 (488)
                      .+   +++.+.+..+-++  -|+ ++++||+.+|+|+|+-...+-.   ...+.+ -+.|..+.      . +.++++++
T Consensus       335 ~~---iL~h~~vg~FitH--~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~a  408 (456)
T PLN02210        335 EK---ILSHMAISCFVTH--CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERC  408 (456)
T ss_pred             HH---HhcCcCcCeEEee--CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHH
Confidence            64   6777775444343  354 4899999999999997654311   023333 46676663      2 78999999


Q ss_pred             HHHHHhc
Q 011355          428 LYGIWAD  434 (488)
Q Consensus       428 i~~ll~~  434 (488)
                      +.+++.+
T Consensus       409 v~~~m~~  415 (456)
T PLN02210        409 IEAVTEG  415 (456)
T ss_pred             HHHHhcC
Confidence            9999976

>PLN00414 glycosyltransferase family protein

Probab=98.23  E-value=0.0072  Score=59.82  Aligned_cols=209  Identities=11%  Similarity=0.009  Sum_probs=113.1

Q ss_pred             hhcCCccEEEEcChhhHH-HHHHHhcCC-CCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccC
Q 011355          230 KFFPKYAHHVATSDHCGD-VLKRIYMIP-EERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKG  307 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~-~~~~~~g~~-~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg  307 (488)
                      ..+.+++.+++.|-...+ .+.+.+.-. ..++.-|..-+...............-+-++-.+.++.+.+.+|+..... 
T Consensus       188 ~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~-  266 (446)
T PLN00414        188 KGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFE-  266 (446)
T ss_pred             HhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCC-
Confidence            345778999998854333 333323110 12455555433211100001111234455555555557788888875432 


Q ss_pred             hHHHHHHHHHhHhhccCCCCCeEEEEEe---CCC----chhHHhh-h-CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          308 HPLMFEALKQLLAENDTFRRSTVFLVAG---DGP----WGARYRD-L-GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       308 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG---~g~----~~~~~~~-l-~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                      .+.+.+....|...+    -++-.++..   .+.    ..+.+++ . +....+.|++|+.+   +++.+.+..+-++  
T Consensus       267 ~~q~~e~a~gL~~s~----~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~---vL~h~~v~~fvtH--  337 (446)
T PLN00414        267 KDQFQEFCLGMELTG----LPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPL---ILSHPSVGCFVNH--  337 (446)
T ss_pred             HHHHHHHHHHHHHcC----CCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHH---HhcCCccceEEec--
Confidence            345666666555544    344444432   111    1111111 1 24566779999775   5555644333232  


Q ss_pred             CCCChHHHHHHHcCCcEEEeCCCC----ccccee-ecCCceeEeC-----C-CHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011355          379 QGLDHTVLEAMLSGKPLMATRLAS----IVGSVI-VGTDMGYLFS-----P-QVESVKKALYGIWADGREVLEKKGLVAR  447 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v-~~~~~g~l~~-----~-d~~~la~~i~~ll~~~~~~~~~~~~~a~  447 (488)
                      -| -++++||+.+|+|+|+-...+    .. ..+ +.-+.|..+.     . +.+++++++.+++.++.+..+++.++++
T Consensus       338 ~G-~nS~~Ea~~~GvP~l~~P~~~dQ~~na-~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~  415 (446)
T PLN00414        338 CG-FGSMWESLVSDCQIVFIPQLADQVLIT-RLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHK  415 (446)
T ss_pred             Cc-hhHHHHHHHcCCCEEecCcccchHHHH-HHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHH
Confidence            34 358999999999999975433    11 223 2346666662     2 7899999999999874455555666655


Q ss_pred             HHH
Q 011355          448 KRG  450 (488)
Q Consensus       448 ~~~  450 (488)
                      +.-
T Consensus       416 ~~~  418 (446)
T PLN00414        416 KLK  418 (446)
T ss_pred             HHH
Confidence            443

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=98.20  E-value=0.0011  Score=60.99  Aligned_cols=206  Identities=15%  Similarity=0.138  Sum_probs=119.1

Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEee-eccccChHH
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR-LVKDKGHPL  310 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr-l~~~Kg~~~  310 (488)
                      .++..+|++ .+.....+++.++..+.....-|..+|..........          ..++++.| .+|+ -++..++-.
T Consensus       135 q~rvg~V~a-t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~~----------~~~~~ltI-LvGNSgd~sNnHie  202 (360)
T PF07429_consen  135 QKRVGHVFA-TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKNK----------KNKGKLTI-LVGNSGDPSNNHIE  202 (360)
T ss_pred             HhhcCeEEE-EcchHHHHHHHcCCCCceEEEcCCCCchhhhcccccc----------CCCCceEE-EEcCCCCCCccHHH
Confidence            355667765 6788889999886433344333434443221111110          11233666 4565 456677755


Q ss_pred             HHHHHHHhHhhccCCCCCeEEEEE-eCCC----chhHHhh----h-C-CcEEE-eCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          311 MFEALKQLLAENDTFRRSTVFLVA-GDGP----WGARYRD----L-G-TNVIV-LGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       311 ll~a~~~l~~~~~~~~~~~~l~iv-G~g~----~~~~~~~----l-~-~~V~~-~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                      +++++++..  .    .++++++- |-|.    +.+++.+    + + +++.. ..+++-+|..++++.||+.++...+.
T Consensus       203 aL~~L~~~~--~----~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQ  276 (360)
T PF07429_consen  203 ALEALKQQF--G----DDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQ  276 (360)
T ss_pred             HHHHHHHhc--C----CCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechh
Confidence            555554422  2    46775543 3332    2222222    2 3 47765 56999999999999999999998887


Q ss_pred             CCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeC--C-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCC
Q 011355          379 QGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFS--P-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFT  455 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~--~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs  455 (488)
                      +|.| +++=.+.+|+||+.+.....- ..+.+.+.-+++.  . |...+.++=+++..-++           +.+  .|.
T Consensus       277 QgiG-nI~lLl~~G~~v~L~~~np~~-~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~dk-----------~~i--aFf  341 (360)
T PF07429_consen  277 QGIG-NICLLLQLGKKVFLSRDNPFW-QDLKEQGIPVLFYGDELDEALVREAQRQLANVDK-----------QQI--AFF  341 (360)
T ss_pred             hhHh-HHHHHHHcCCeEEEecCChHH-HHHHhCCCeEEeccccCCHHHHHHHHHHHhhCcc-----------cce--eee
Confidence            8988 566699999999998766655 3334444334444  2 56666655555544311           111  155


Q ss_pred             HHHHHHHHHHHHHHh
Q 011355          456 ATKMAAAYERLFLCI  470 (488)
Q Consensus       456 ~~~~~~~~~~~~~~~  470 (488)
                      .....+.+.+.+.-.
T Consensus       342 ~pny~~~w~~~l~~~  356 (360)
T PF07429_consen  342 APNYLQGWRQALRLA  356 (360)
T ss_pred             CCchHHHHHHHHHHH
Confidence            555666666655443

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides

Probab=98.16  E-value=3.5e-07  Score=78.59  Aligned_cols=164  Identities=16%  Similarity=0.175  Sum_probs=81.8

Q ss_pred             ccccCCCCCCCCc-eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCCC-ceEEEecCC
Q 011355           64 NHLSFPSNPPLKL-LKIALFVKKWPHRSHAGGLERHALTLHLALAKR--GHELHIFTASCLNCSFPTYPI-SSLYFHLSK  139 (488)
Q Consensus        64 ~~~~~~~~~~~~~-mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~-~~i~~~~~~  139 (488)
                      +|+++...+.+.+ -+.++++.      .+-|.-..+..|++.|.++  |+.|.+.+.+..+........ +.+....  
T Consensus         7 eR~g~~~~~~~~~~~~~iWiHa------~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~--   78 (186)
T PF04413_consen    7 ERLGFYPPPPPRKPGPLIWIHA------ASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQY--   78 (186)
T ss_dssp             HHHS--GGGGGGT--T-EEEE-------SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE--
T ss_pred             HhcCCCCCCCCCCCCCcEEEEE------CCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEE--
Confidence            6677653333221 16788886      6688889999999999987  888888887665443221111 1111111  


Q ss_pred             CCccCcchhHHHHHHHHHHhcCCCCCcEEEeCCcchH-----HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChh
Q 011355          140 PTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLR-----HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQ  214 (488)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~-----~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  214 (488)
                          ..++.....+.+....    +||++++....++     .....++| ++..--.+.                  ..
T Consensus        79 ----~P~D~~~~~~rfl~~~----~P~~~i~~EtElWPnll~~a~~~~ip-~~LvNarls------------------~~  131 (186)
T PF04413_consen   79 ----LPLDFPWAVRRFLDHW----RPDLLIWVETELWPNLLREAKRRGIP-VVLVNARLS------------------ER  131 (186)
T ss_dssp             -------SSHHHHHHHHHHH------SEEEEES----HHHHHH-----S--EEEEEE-----------------------
T ss_pred             ----eCccCHHHHHHHHHHh----CCCEEEEEccccCHHHHHHHhhcCCC-EEEEeeeec------------------cc
Confidence                2256677778888887    9999998765433     22234566 333222110                  01


Q ss_pred             HHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecC
Q 011355          215 AYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILN  265 (488)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~n  265 (488)
                      +...+.++..+..  ..++..|.|.+.|+..++.+.+ .|.+++++.|.+|
T Consensus       132 s~~~~~~~~~~~r--~~l~~f~~i~aqs~~da~r~~~-lG~~~~~v~v~Gn  179 (186)
T PF04413_consen  132 SFRRYRRFPFLFR--PLLSRFDRILAQSEADAERFRK-LGAPPERVHVTGN  179 (186)
T ss_dssp             ---------HHHH--HHGGG-SEEEESSHHHHHHHHT-TT-S--SEEE---
T ss_pred             cchhhhhhHHHHH--HHHHhCCEEEECCHHHHHHHHH-cCCCcceEEEeCc
Confidence            1111222222222  4578899999999999999999 8999999999987

Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=98.14  E-value=7.5e-07  Score=80.69  Aligned_cols=43  Identities=28%  Similarity=0.457  Sum_probs=36.1

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC  120 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  120 (488)
                      ||++++..++|-...||....+..|.++|+++||+|.|+++..
T Consensus         1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y   43 (245)
T PF08323_consen    1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKY   43 (245)
T ss_dssp             EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred             CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence            7999999998878999999999999999999999999999875

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.98  E-value=0.022  Score=56.44  Aligned_cols=191  Identities=12%  Similarity=0.014  Sum_probs=100.5

Q ss_pred             cCCccEEEEcChhhHH-HHHHHhcC-CCCcEEEecCCccCCCcC-CCcccchhhhhhhCCCCCCcEEEEEEeeeccccCh
Q 011355          232 FPKYAHHVATSDHCGD-VLKRIYMI-PEERVHVILNGVDEEVFK-PDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH  308 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~-~~~~~~g~-~~~~i~vi~ngvd~~~~~-~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~  308 (488)
                      ..++|.|++.|-...+ .+.+.+.- ...++..|..-....... .........-+-++-.+.++.+.+.+|+...- ..
T Consensus       201 ~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~-~~  279 (451)
T PLN02410        201 KRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALM-EI  279 (451)
T ss_pred             cccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccC-CH
Confidence            4689999998854433 22222311 112455554322110000 00111111223333333444788888887532 23


Q ss_pred             HHHHHHHHHhHhhccCCCCCeEEEEEeCC----Cc-----h-hHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          309 PLMFEALKQLLAENDTFRRSTVFLVAGDG----PW-----G-ARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       309 ~~ll~a~~~l~~~~~~~~~~~~l~ivG~g----~~-----~-~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                      +.+.+.+.-|....    ..+- .++..+    ..     . ...+...+|..+.+++|+.+   +++..++..+-++  
T Consensus       280 ~q~~ela~gLe~s~----~~Fl-Wv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~---iL~h~~v~~fvtH--  349 (451)
T PLN02410        280 NEVMETASGLDSSN----QQFL-WVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKE---VLSHPAVGGFWSH--  349 (451)
T ss_pred             HHHHHHHHHHHhcC----CCeE-EEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHH---HhCCCccCeeeec--
Confidence            34444444444332    2232 333321    11     1 12223557888889999876   5666555333232  


Q ss_pred             CCCChHHHHHHHcCCcEEEeCCCCccc---ceeecC-CceeEeCC--CHHHHHHHHHHHHhc
Q 011355          379 QGLDHTVLEAMLSGKPLMATRLASIVG---SVIVGT-DMGYLFSP--QVESVKKALYGIWAD  434 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~-~~g~l~~~--d~~~la~~i~~ll~~  434 (488)
                      -|+ ++++||+++|+|+|+-...+-..   ..+.+. +.|+-+..  +.++++++|.+++.+
T Consensus       350 ~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~~  410 (451)
T PLN02410        350 CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRLMVE  410 (451)
T ss_pred             Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHcC
Confidence            354 58999999999999976543110   223333 57766643  899999999999977

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.97  E-value=6.4e-07  Score=76.39  Aligned_cols=108  Identities=21%  Similarity=0.337  Sum_probs=69.3

Q ss_pred             EEEEeCCCchhHHhh---hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc--
Q 011355          331 FLVAGDGPWGARYRD---LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG--  405 (488)
Q Consensus       331 l~ivG~g~~~~~~~~---l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~--  405 (488)
                      ++++|.....+...+   ...+|.+.++.+  ++.++|+.||++|.   + .| +.++.|++++|+|.|.-..++..+  
T Consensus        35 iv~~G~~~~~~~~~~~~~~~~~v~~~~~~~--~m~~~m~~aDlvIs---~-aG-~~Ti~E~l~~g~P~I~ip~~~~~~~~  107 (167)
T PF04101_consen   35 IVQTGKNNYEELKIKVENFNPNVKVFGFVD--NMAELMAAADLVIS---H-AG-AGTIAEALALGKPAIVIPLPGAADNH  107 (167)
T ss_dssp             CCCCTTCECHHHCCCHCCTTCCCEEECSSS--SHHHHHHHHSEEEE---C-S--CHHHHHHHHCT--EEEE--TTT-T-C
T ss_pred             EEEECCCcHHHHHHHHhccCCcEEEEechh--hHHHHHHHcCEEEe---C-CC-ccHHHHHHHcCCCeeccCCCCcchHH
Confidence            345565533332222   236899999966  89999999999996   3 23 579999999999999877666210  


Q ss_pred             -----ceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011355          406 -----SVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKKGLVA  446 (488)
Q Consensus       406 -----e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~a  446 (488)
                           ..+.+...|..+..   +.++|.++|.+++.+ +.....+.+++
T Consensus       108 q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~-~~~~~~~~~~~  155 (167)
T PF04101_consen  108 QEENAKELAKKGAAIMLDESELNPEELAEAIEELLSD-PEKLKEMAKAA  155 (167)
T ss_dssp             HHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCC-HH-SHHHCCCH
T ss_pred             HHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcC-cHHHHHHHHHH
Confidence                 12334444555543   578899999999998 66655555443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=97.96  E-value=0.00047  Score=67.48  Aligned_cols=181  Identities=20%  Similarity=0.315  Sum_probs=127.5

Q ss_pred             hhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEE-----eCCCchhHHhhhC---CcEEEe
Q 011355          282 FKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVA-----GDGPWGARYRDLG---TNVIVL  353 (488)
Q Consensus       282 ~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-----G~g~~~~~~~~l~---~~V~~~  353 (488)
                      .|..+++|++. ++++.+..+  .|=-+..++.+..+.++.    |+-.|.+.     |+...+...++++   ++|+|.
T Consensus       749 ~r~~y~Lp~d~-vvf~~FNqL--yKidP~~l~~W~~ILk~V----PnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs  821 (966)
T KOG4626|consen  749 TRSQYGLPEDA-VVFCNFNQL--YKIDPSTLQMWANILKRV----PNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFS  821 (966)
T ss_pred             CCCCCCCCCCe-EEEeechhh--hcCCHHHHHHHHHHHHhC----CcceeEEEeccccchHHHHHHHHHhCCCccceeec
Confidence            67788999887 777666655  444467899999999998    88766654     4323334444443   889999


Q ss_pred             CccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc----ceeecCCceeEeCCCHHHHHHHHH
Q 011355          354 GPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG----SVIVGTDMGYLFSPQVESVKKALY  429 (488)
Q Consensus       354 g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~----e~v~~~~~g~l~~~d~~~la~~i~  429 (488)
                      +-...+|-..-+.-+||.+-+-.. .| -.+-.|.+..|+|+|+-.......    ..+..-+.|-++..+.++..+.-.
T Consensus       822 ~va~k~eHvrr~~LaDv~LDTplc-nG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV  899 (966)
T KOG4626|consen  822 PVAAKEEHVRRGQLADVCLDTPLC-NG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKNREEYVQIAV  899 (966)
T ss_pred             cccchHHHHHhhhhhhhcccCcCc-CC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHHH
Confidence            977777877888999999876654 33 346789999999999865332221    122223444455448889999889


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHh--hhCCHHHHHHHHHHHHHHhhc
Q 011355          430 GIWADGREVLEKKGLVARKRGL--NLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       430 ~ll~~~~~~~~~~~~~a~~~~~--~~fs~~~~~~~~~~~~~~~~~  472 (488)
                      ++-.| .+.++.+...-+..-.  .-|+-...+..++++|.++=+
T Consensus       900 ~Latd-~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~  943 (966)
T KOG4626|consen  900 RLATD-KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWK  943 (966)
T ss_pred             HhhcC-HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHH
Confidence            99888 8888888776655432  348888888888888877654

>PLN02562 UDP-glycosyltransferase

Probab=97.95  E-value=0.026  Score=56.08  Aligned_cols=131  Identities=18%  Similarity=0.121  Sum_probs=79.2

Q ss_pred             cEEEEEEeeec---cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCC---Cchh-HHhhhCCcEEEeCccCHHHHHHHH
Q 011355          293 SLVLGMAGRLV---KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDG---PWGA-RYRDLGTNVIVLGPLDQTRLAMFY  365 (488)
Q Consensus       293 ~~~i~~~Grl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g---~~~~-~~~~l~~~V~~~g~v~~~~l~~~~  365 (488)
                      +.+++.+|+..   +.+-+..+..+++..   .    ..+-+ ++..+   ...+ ..+...+|+.+.+++|+.+   ++
T Consensus       274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g----~~fiW-~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~---iL  342 (448)
T PLN02562        274 SVIYISFGSWVSPIGESNVRTLALALEAS---G----RPFIW-VLNPVWREGLPPGYVERVSKQGKVVSWAPQLE---VL  342 (448)
T ss_pred             ceEEEEecccccCCCHHHHHHHHHHHHHC---C----CCEEE-EEcCCchhhCCHHHHHHhccCEEEEecCCHHH---Hh
Confidence            36777888864   233344444554444   2    22222 23321   1111 1223557899999999775   45


Q ss_pred             HhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeec-CCceeEeCC-CHHHHHHHHHHHHhcCHHHH
Q 011355          366 NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVG-TDMGYLFSP-QVESVKKALYGIWADGREVL  439 (488)
Q Consensus       366 ~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~-~~~g~l~~~-d~~~la~~i~~ll~~~~~~~  439 (488)
                      +..++..+-++  -|+ ++++||+.+|+|+|+....+    .. ..+.+ -+.|+-+.. +.+++++++.+++.+ ++.+
T Consensus       343 ~h~~v~~fvtH--~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na-~~~~~~~g~g~~~~~~~~~~l~~~v~~~l~~-~~~r  417 (448)
T PLN02562        343 KHQAVGCYLTH--CGW-NSTMEAIQCQKRLLCYPVAGDQFVNC-AYIVDVWKIGVRISGFGQKEVEEGLRKVMED-SGMG  417 (448)
T ss_pred             CCCccceEEec--Ccc-hhHHHHHHcCCCEEeCCcccchHHHH-HHHHHHhCceeEeCCCCHHHHHHHHHHHhCC-HHHH
Confidence            55665444343  353 58999999999999875543    21 23333 356666655 889999999999987 5443

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=97.93  E-value=0.0018  Score=62.08  Aligned_cols=107  Identities=16%  Similarity=0.156  Sum_probs=72.7

Q ss_pred             hhhhhhhCCCCCCcEEEEEEee-eccccChH--HHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh----CCc-EE
Q 011355          280 KDFKKKFGIPENRSLVLGMAGR-LVKDKGHP--LMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL----GTN-VI  351 (488)
Q Consensus       280 ~~~r~~~~i~~~~~~~i~~~Gr-l~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l----~~~-V~  351 (488)
                      ..+.++++++.+++++++..|. ..+.|...  ...+.+..+.+      .+..+++.|...+.+..+++    .++ +.
T Consensus       162 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~------~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~  235 (334)
T TIGR02195       162 AAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID------QGYQVVLFGSAKDHPAGNEIEALLPGELRN  235 (334)
T ss_pred             HHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH------CCCEEEEEEChhhHHHHHHHHHhCCccccc
Confidence            3455666776556577777776 34666653  66676666654      34678888976655544443    233 34


Q ss_pred             EeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEe
Q 011355          352 VLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT  398 (488)
Q Consensus       352 ~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~  398 (488)
                      +.|..+-.++..+++.||++|..-    + | .+-=|.|.|+|+|+-
T Consensus       236 l~g~~sL~el~ali~~a~l~I~~D----S-G-p~HlAaA~~~P~i~l  276 (334)
T TIGR02195       236 LAGETSLDEAVDLIALAKAVVTND----S-G-LMHVAAALNRPLVAL  276 (334)
T ss_pred             CCCCCCHHHHHHHHHhCCEEEeeC----C-H-HHHHHHHcCCCEEEE
Confidence            678888889999999999999743    2 1 445588999999985

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=97.68  E-value=0.0067  Score=58.41  Aligned_cols=105  Identities=15%  Similarity=0.106  Sum_probs=68.6

Q ss_pred             hhhhhCCCCCCcEEEEEEeee-ccccCh--HHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh----CC----c-
Q 011355          282 FKKKFGIPENRSLVLGMAGRL-VKDKGH--PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL----GT----N-  349 (488)
Q Consensus       282 ~r~~~~i~~~~~~~i~~~Grl-~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l----~~----~-  349 (488)
                      +.+.+++..+++++.+..|.- .+.|..  +.+.+.+..+.+      .++++++.|...+.+..+++    ..    + 
T Consensus       170 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~------~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~  243 (348)
T PRK10916        170 TCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID------EGYQVVLFGSAKDHEAGNEILAALNTEQQAWC  243 (348)
T ss_pred             HHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH------CCCeEEEEeCHHhHHHHHHHHHhcccccccce
Confidence            444455544554666677753 356654  355666666653      45678888876555544432    11    1 


Q ss_pred             EEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEe
Q 011355          350 VIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT  398 (488)
Q Consensus       350 V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~  398 (488)
                      +.+.|..+-.++..+++.||++|..-    + | .+-=|.|.|+|+|+-
T Consensus       244 ~~l~g~~sL~el~ali~~a~l~I~nD----T-G-p~HlAaA~g~P~val  286 (348)
T PRK10916        244 RNLAGETQLEQAVILIAACKAIVTND----S-G-LMHVAAALNRPLVAL  286 (348)
T ss_pred             eeccCCCCHHHHHHHHHhCCEEEecC----C-h-HHHHHHHhCCCEEEE
Confidence            55678778889999999999999743    2 1 445589999999975

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=97.66  E-value=0.00038  Score=58.28  Aligned_cols=155  Identities=15%  Similarity=0.192  Sum_probs=82.1

Q ss_pred             HCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCc-----------chhHHHHHHHHHHhcCCCCCcEEEeCCc-ch
Q 011355          108 KRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGY-----------LDQSIVWQQLQTQNSTGKPFDVIHTESV-GL  175 (488)
Q Consensus       108 ~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~Dvv~~~~~-~~  175 (488)
                      +.||+|..+|........  .++..+.+..........           ..-....+.+..+..+...||||+.|+. +-
T Consensus         1 q~gh~v~fl~~~~~~~~~--~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~GWGe   78 (171)
T PF12000_consen    1 QRGHEVVFLTERKRPPIP--PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHPGWGE   78 (171)
T ss_pred             CCCCEEEEEecCCCCCCC--CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcCCcch
Confidence            369999999955433322  344444444322111111           1122334555556666668999999973 33


Q ss_pred             HHhhhccCCc-EEEeeeCCcchhhhhhhhHhhhcCCCChh--HHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH
Q 011355          176 RHTRARNLTN-VVVSWHGIAYETIHSDIIQELLRTPEEPQ--AYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI  252 (488)
Q Consensus       176 ~~~~~~~~p~-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~  252 (488)
                      ...++.-.|. -+..+.+.++.....+.    .-.|..+.  .....-++ +.......+..+|..+++|.+.++.+-..
T Consensus        79 ~Lflkdv~P~a~li~Y~E~~y~~~g~d~----~FDpe~p~~~~~~~~~r~-rN~~~l~~l~~~D~~isPT~wQ~~~fP~~  153 (171)
T PF12000_consen   79 TLFLKDVFPDAPLIGYFEFYYRASGADV----GFDPEFPPSLDDRARLRM-RNAHNLLALEQADAGISPTRWQRSQFPAE  153 (171)
T ss_pred             hhhHHHhCCCCcEEEEEEEEecCCCCcC----CCCCCCCCCHHHHHHHHH-HhHHHHHHHHhCCcCcCCCHHHHHhCCHH
Confidence            4444433343 12223232222111111    01111111  11111121 22222345688999999999999998886


Q ss_pred             hcCCCCcEEEecCCccCCCc
Q 011355          253 YMIPEERVHVILNGVDEEVF  272 (488)
Q Consensus       253 ~g~~~~~i~vi~ngvd~~~~  272 (488)
                      +   .+|+.||.-|||++.+
T Consensus       154 ~---r~kI~VihdGiDt~~~  170 (171)
T PF12000_consen  154 F---RSKISVIHDGIDTDRF  170 (171)
T ss_pred             H---HcCcEEeecccchhhc
Confidence            6   5799999999998754

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>PLN02173 UDP-glucosyl transferase family protein

Probab=97.60  E-value=0.091  Score=52.05  Aligned_cols=150  Identities=15%  Similarity=0.080  Sum_probs=84.6

Q ss_pred             hhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC--ch-hHHhhh-CCcEEEeCccCHH
Q 011355          284 KKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP--WG-ARYRDL-GTNVIVLGPLDQT  359 (488)
Q Consensus       284 ~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~--~~-~~~~~l-~~~V~~~g~v~~~  359 (488)
                      +-++-.+.++.+.+..|+... -..+.+.+.+.-| ..     -++-.++-.+..  .. ...+.. .+++.+.+++|+.
T Consensus       256 ~WLd~~~~~svvyvsfGS~~~-~~~~~~~ela~gL-s~-----~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~  328 (449)
T PLN02173        256 DWLDKRPQGSVVYIAFGSMAK-LSSEQMEEIASAI-SN-----FSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQL  328 (449)
T ss_pred             HHHhcCCCCceEEEEeccccc-CCHHHHHHHHHHh-cC-----CCEEEEEeccchhcccchHHHhhcCCceEEeCCCCHH
Confidence            334333344477788888643 2233444444444 32     234444432111  11 122233 5789999999966


Q ss_pred             HHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeecC-CceeEeC------C-CHHHHHHHH
Q 011355          360 RLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVGT-DMGYLFS------P-QVESVKKAL  428 (488)
Q Consensus       360 ~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~-~~g~l~~------~-d~~~la~~i  428 (488)
                      +   +++...+..+-++  -| .++++||+++|+|+|+-..-+-..   ..+.+. +.|+-+.      . +.+++++++
T Consensus       329 ~---iL~H~~v~~FvtH--cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av  402 (449)
T PLN02173        329 Q---VLSNKAIGCFMTH--CG-WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSI  402 (449)
T ss_pred             H---HhCCCccceEEec--Cc-cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHH
Confidence            4   6777776555453  34 469999999999999975433110   233332 4555442      1 679999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHH
Q 011355          429 YGIWADGREVLEKKGLVARK  448 (488)
Q Consensus       429 ~~ll~~~~~~~~~~~~~a~~  448 (488)
                      .+++.+ ++ .+++.+++++
T Consensus       403 ~~vm~~-~~-~~~~r~~a~~  420 (449)
T PLN02173        403 KEVMEG-EK-SKEMKENAGK  420 (449)
T ss_pred             HHHhcC-Ch-HHHHHHHHHH
Confidence            999976 32 2444444433

>PLN02207 UDP-glycosyltransferase

Probab=97.56  E-value=0.038  Score=54.99  Aligned_cols=189  Identities=11%  Similarity=0.041  Sum_probs=100.9

Q ss_pred             hhcCCccEEEEcChhhHHH-HHHHhcC--CCCcEEEecCCccCCCcCCCc----ccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          230 KFFPKYAHHVATSDHCGDV-LKRIYMI--PEERVHVILNGVDEEVFKPDV----AMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~-~~~~~g~--~~~~i~vi~ngvd~~~~~~~~----~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      ..+.++|.+++.|....+. ..+.+.-  ...++..|..-..... ...+    ....++.+-++-.+.++.+.+.+|+.
T Consensus       207 ~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~-~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~  285 (468)
T PLN02207        207 ILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKA-QPHPEQDLARRDELMKWLDDQPEASVVFLCFGSM  285 (468)
T ss_pred             HhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCccccc-CCCCccccchhhHHHHHHhcCCCCcEEEEEeccC
Confidence            4468899999999876664 2222310  1124555543321110 0011    11133444454334444777788876


Q ss_pred             cc--ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc-------hhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEe
Q 011355          303 VK--DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW-------GARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVN  373 (488)
Q Consensus       303 ~~--~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~-------~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~  373 (488)
                      ..  .+.+..+..++..+   .    ..+ +..+.+...       ....+...+++.+.+|+|+.++   ++...+..+
T Consensus       286 ~~~~~~q~~ela~~l~~~---~----~~f-lW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~I---L~H~~vg~F  354 (468)
T PLN02207        286 GRLRGPLVKEIAHGLELC---Q----YRF-LWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEI---LAHKAVGGF  354 (468)
T ss_pred             cCCCHHHHHHHHHHHHHC---C----CcE-EEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHH---hccccccee
Confidence            42  23344445555443   1    223 233332111       1122235577888899998764   455555333


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeec-CCceeEe---------CC-CHHHHHHHHHHHHh
Q 011355          374 PTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVG-TDMGYLF---------SP-QVESVKKALYGIWA  433 (488)
Q Consensus       374 ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~-~~~g~l~---------~~-d~~~la~~i~~ll~  433 (488)
                      -++  -|+ ++++||+.+|+|+|+-...+-..   ..+.+ -+.|+-+         +. +.+++.++|.+++.
T Consensus       355 vTH--~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        355 VSH--CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             eec--Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence            343  344 48899999999999976544110   12222 3455422         12 78999999999996

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=97.50  E-value=0.00068  Score=68.93  Aligned_cols=142  Identities=14%  Similarity=0.178  Sum_probs=83.3

Q ss_pred             hhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHH
Q 011355          281 DFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTR  360 (488)
Q Consensus       281 ~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~  360 (488)
                      ++.+.+.-+.+++.+++..|+... .-.+..++++.+..++.    |+ +++..-++.   ....+.+|+.+..|+|+. 
T Consensus       265 ~~~~~~~~~~~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~---~~~~l~~n~~~~~W~PQ~-  334 (500)
T PF00201_consen  265 ELWNFLDSSGKKGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGE---PPENLPKNVLIVKWLPQN-  334 (500)
T ss_dssp             HHHHHTSTTTTTEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCS---HGCHHHTTEEEESS--HH-
T ss_pred             ccchhhhccCCCCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-ccccccccc---ccccccceEEEeccccch-
Confidence            344444322345578888898753 22333344444444444    66 555554442   223456899999999976 


Q ss_pred             HHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeecCCceeEeCC---CHHHHHHHHHHHHhc
Q 011355          361 LAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVGTDMGYLFSP---QVESVKKALYGIWAD  434 (488)
Q Consensus       361 l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~~~g~l~~~---d~~~la~~i~~ll~~  434 (488)
                        ++++...+-++-+ + .| -+.+.||+.+|+|+|+-..-+-..   ..+++.+.|..++.   +.+++.++|.++++|
T Consensus       335 --~lL~hp~v~~fit-H-gG-~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~  409 (500)
T PF00201_consen  335 --DLLAHPRVKLFIT-H-GG-LNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLEN  409 (500)
T ss_dssp             --HHHTSTTEEEEEE-S----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHS
T ss_pred             --hhhhcccceeeee-c-cc-cchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhh
Confidence              4566555533333 2 34 569999999999999986544110   34556677887774   789999999999998


Q ss_pred             CHHH
Q 011355          435 GREV  438 (488)
Q Consensus       435 ~~~~  438 (488)
                       +..
T Consensus       410 -~~y  412 (500)
T PF00201_consen  410 -PSY  412 (500)
T ss_dssp             -HHH
T ss_pred             -hHH
Confidence             543

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PLN02764 glycosyltransferase family protein

Probab=97.49  E-value=0.029  Score=55.37  Aligned_cols=206  Identities=12%  Similarity=0.002  Sum_probs=109.5

Q ss_pred             hhcCCccEEEEcChhhHH-HHHHHhcCC-CCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccC
Q 011355          230 KFFPKYAHHVATSDHCGD-VLKRIYMIP-EERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKG  307 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~-~~~~~~g~~-~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg  307 (488)
                      +.+..++.|++.|-+..+ .+.+.+.-. ..++..|..-+....  .........-+-++-.+.++.+.+.+|+... -.
T Consensus       195 ~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~--~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~-~~  271 (453)
T PLN02764        195 TSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPD--KTRELEERWVKWLSGYEPDSVVFCALGSQVI-LE  271 (453)
T ss_pred             HhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcc--ccccchhHHHHHHhCCCCCceEEEeeccccc-CC
Confidence            345778899988744333 333323110 134665554322110  0011123344555545555578888898743 12


Q ss_pred             hHHHHHHHHHhHhhccCCCCCeEEEEEe-CCCc--hh----HHhh--hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          308 HPLMFEALKQLLAENDTFRRSTVFLVAG-DGPW--GA----RYRD--LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       308 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG-~g~~--~~----~~~~--l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                      .+.+.+....|....    -++.+++-. .+..  ..    .+++  -+..+.+.+|+|+.++   ++...+..+-++  
T Consensus       272 ~~q~~ela~gL~~s~----~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~v---L~h~~v~~FvtH--  342 (453)
T PLN02764        272 KDQFQELCLGMELTG----SPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLI---LSHPSVGCFVSH--  342 (453)
T ss_pred             HHHHHHHHHHHHhCC----CCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHH---hcCcccCeEEec--
Confidence            344566555555444    345555541 1111  11    1111  1345777899998764   555444333232  


Q ss_pred             CCCChHHHHHHHcCCcEEEeCCCCccc---ceee-cCCceeEeC-----C-CHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011355          379 QGLDHTVLEAMLSGKPLMATRLASIVG---SVIV-GTDMGYLFS-----P-QVESVKKALYGIWADGREVLEKKGLVARK  448 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~-~~~~g~l~~-----~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~  448 (488)
                      -| -++++||+.+|+|+|+-...+-..   ..+. .-+.|+-+.     . +.+++.+++.++++++.+..+++.+++++
T Consensus       343 ~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~  421 (453)
T PLN02764        343 CG-FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTK  421 (453)
T ss_pred             CC-chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence            34 458999999999999976543110   2332 234555441     3 78999999999998732444445444443

>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E

Probab=97.44  E-value=0.029  Score=49.82  Aligned_cols=296  Identities=16%  Similarity=0.106  Sum_probs=143.7

Q ss_pred             CcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-CCCceEEEecCCCCccCcchhHHHHHHHHHHhcCCCCCcEEEeC
Q 011355           93 GGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-YPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTE  171 (488)
Q Consensus        93 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~  171 (488)
                      .|+.++..++-..+.+.|++++++......-.... .....+++...        .....-..+....    .+|+++++
T Consensus         1 CGVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~~~~~si~k~--------~~~e~de~v~~vN----~yDI~m~n   68 (355)
T PF11440_consen    1 CGVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHDSKSFSIPKY--------LAKEYDETVKKVN----DYDIVMFN   68 (355)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS-TTTEEEE---------TTTHHHHHHHHHT----SSSEEEEE
T ss_pred             CCccccHHHHHHHHHhcCCeeEEEEecccccCCccccccceeeeehh--------hHHHHHHHHHHhh----ccCEEEEe
Confidence            48899999999999999999999998764433322 12222233211        1112223333343    79999998


Q ss_pred             CcchHH-----------hhhccC-C-cEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          172 SVGLRH-----------TRARNL-T-NVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       172 ~~~~~~-----------~~~~~~-p-~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      +.....           .+..-. + +++...|+.......                        +...-...++.+|.|
T Consensus        69 SvPa~~vqE~~iNnY~kii~~Ik~~ik~V~~~Hdh~~lsI~------------------------rn~~le~~m~~~DvI  124 (355)
T PF11440_consen   69 SVPATKVQEAIINNYEKIIKKIKPSIKVVGFMHDHNKLSID------------------------RNPYLEGTMNEMDVI  124 (355)
T ss_dssp             E--BTTS-HHHHHHHHHHHHCS-TTSEEEEEE---SHHHHT------------------------TBSSHHHHHHH-SEE
T ss_pred             cccCchHHHHHHHHHHHHHHhccccceeEEEeeccceeecc------------------------ccccHHHHHHhhcEE
Confidence            743211           111111 1 256777875332211                        111111345678999


Q ss_pred             EEcChhh--HHHHH-HHhcC---CCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEE---EEEeeeccccChH
Q 011355          239 VATSDHC--GDVLK-RIYMI---PEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVL---GMAGRLVKDKGHP  309 (488)
Q Consensus       239 i~~S~~~--~~~~~-~~~g~---~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i---~~~Grl~~~Kg~~  309 (488)
                      .+.|...  .+.+. ..+.-   ..+++...|-....+    .+.+-...|..+-....+ +..   .|+||..-.||..
T Consensus       125 fshs~~g~f~kv~m~~l~Ps~~~l~~~i~~~p~v~nfq----pp~~i~~~Rstywkd~se-~nmnv~~yigR~Tt~kG~~  199 (355)
T PF11440_consen  125 FSHSDNGWFSKVLMKELLPSKVSLFDRIKKFPMVFNFQ----PPMDINKYRSTYWKDVSE-KNMNVNRYIGRQTTWKGPR  199 (355)
T ss_dssp             EES-TTSHHHHTHHHHHS-SS--SSS-------EEE--------B-HHHHHHHH---GGG-SEEEEEEEE--SSGGG-HH
T ss_pred             EeccccchHHHHHHHhhccccCchhhhhhhcceeeecC----CcccHHHHHHHHhhhhHh-hhcccceeeeeeeeecCcH
Confidence            9987542  23333 33321   112344333332221    122224556655533333 444   6999999999999


Q ss_pred             HHHHHHHHhHhhccCCCCCeEEEEEeCCCchh--HHhh-----------------hC--CcEEEeCccCHHHHHHHHHhc
Q 011355          310 LMFEALKQLLAENDTFRRSTVFLVAGDGPWGA--RYRD-----------------LG--TNVIVLGPLDQTRLAMFYNAI  368 (488)
Q Consensus       310 ~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~--~~~~-----------------l~--~~V~~~g~v~~~~l~~~~~~a  368 (488)
                      .+++..++..+.     ++.+-++-|=.....  .+.+                 +.  .-+.++|..-++|..+.++.+
T Consensus       200 ~mfD~h~~~lK~-----~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks  274 (355)
T PF11440_consen  200 RMFDLHEKILKP-----AGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKS  274 (355)
T ss_dssp             HHHHHHHHTTTT-----TT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTE
T ss_pred             HHhhhHHHhcCC-----cchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhc
Confidence            999998886654     578888888321111  1111                 12  237788876689999999998


Q ss_pred             CEEEeCCC-C----CCCCChHHHHHHHcCC-cEEEeCCCCccc------ceeecCCceeEeCC-CHHHHHHHHHHHHhc
Q 011355          369 DIFVNPTL-R----AQGLDHTVLEAMLSGK-PLMATRLASIVG------SVIVGTDMGYLFSP-QVESVKKALYGIWAD  434 (488)
Q Consensus       369 dv~v~ps~-~----~eg~~~~~lEAma~G~-PVI~~~~~~~~~------e~v~~~~~g~l~~~-d~~~la~~i~~ll~~  434 (488)
                      -+...-+. .    .+.+-.+-+|..|||. ||.-...|..-.      ..+......+.++. |.++-.+.|.++.++
T Consensus       275 ~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~De~dle~T~ekl~E~a~~  353 (355)
T PF11440_consen  275 LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYFDENDLESTVEKLIEVANN  353 (355)
T ss_dssp             EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred             cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeEeccchHHHHHHHHHHHhcc
Confidence            88765432 1    2346778999999996 665543322110      23344455566666 777777777777655

coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.40  E-value=0.18  Score=50.53  Aligned_cols=78  Identities=17%  Similarity=0.326  Sum_probs=51.9

Q ss_pred             CcEEEeCccCHHHHHHHHHh--cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeec-CCceeEeC--
Q 011355          348 TNVIVLGPLDQTRLAMFYNA--IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVG-TDMGYLFS--  418 (488)
Q Consensus       348 ~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~-~~~g~l~~--  418 (488)
                      .++.+.+++|+.+   ++..  +++||.  +  -|+ ++++||+++|+|+|+-...+    .. ..+.+ -+.|..+.  
T Consensus       343 ~g~~v~~w~PQ~~---vL~h~~v~~fvt--H--~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na-~~v~~~~gvG~~~~~~  413 (477)
T PLN02863        343 RGLVIRGWAPQVA---ILSHRAVGAFLT--H--CGW-NSVLEGLVAGVPMLAWPMAADQFVNA-SLLVDELKVAVRVCEG  413 (477)
T ss_pred             CCEEecCCCCHHH---HhcCCCcCeEEe--c--CCc-hHHHHHHHcCCCEEeCCccccchhhH-HHHHHhhceeEEeccC
Confidence            5688889999764   5555  445554  2  343 58999999999999975433    11 22222 25565551  


Q ss_pred             ---C-CHHHHHHHHHHHHhc
Q 011355          419 ---P-QVESVKKALYGIWAD  434 (488)
Q Consensus       419 ---~-d~~~la~~i~~ll~~  434 (488)
                         . +.+++++++.+++.+
T Consensus       414 ~~~~~~~~~v~~~v~~~m~~  433 (477)
T PLN02863        414 ADTVPDSDELARVFMESVSE  433 (477)
T ss_pred             CCCCcCHHHHHHHHHHHhhc
Confidence               2 678999999998843

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.36  E-value=0.094  Score=46.38  Aligned_cols=257  Identities=16%  Similarity=0.164  Sum_probs=125.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      |||-.+++      ...|..+.+..|++.|.+..+.|.++....-.      ..+..-....     ..-.....+....
T Consensus         1 ~ki~aisD------~RtGnt~QaiaLa~~l~r~eyttk~l~~~~l~------~lP~~wl~~y-----p~~~~~~l~~~~~   63 (329)
T COG3660           1 MKIWAISD------GRTGNTHQAIALAEQLTRSEYTTKLLEYNNLA------KLPNFWLAYY-----PIHILRELFGPRL   63 (329)
T ss_pred             CceEEeec------CCCccHHHHHHHHHHhhccceEEEEeeccccc------cCchhhhhcC-----ccHhHHHhhcCcc
Confidence            78888886      67899999999999998644555555443111      1111000000     0000111111111


Q ss_pred             HHhcCCCCCcEEEeCCc---chHHhhhccC--CcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          157 TQNSTGKPFDVIHTESV---GLRHTRARNL--TNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~---~~~~~~~~~~--p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ....+. .||+++..+-   .+...+.+..  + .++.+.+..              .|                     
T Consensus        64 ~r~p~~-~Pdl~I~aGrrta~l~~~lkk~~~~~-~vVqI~~Pr--------------lp---------------------  106 (329)
T COG3660          64 SRKPEQ-RPDLIITAGRRTAPLAFYLKKKFGGI-KVVQIQDPR--------------LP---------------------  106 (329)
T ss_pred             ccCccC-CCceEEecccchhHHHHHHHHhcCCc-eEEEeeCCC--------------CC---------------------
Confidence            111122 6999998752   1222222222  3 444444321              01                     


Q ss_pred             cCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCC-cccchhhhhhhCCCCCCcEEEEEEeeeccccCh--
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPD-VAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH--  308 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~-~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~--  308 (488)
                      ++..|.+|+.-+...+....    ...++.-| ||.....-... ...++.+++.+  |..++++-+++|.-.+.-..  
T Consensus       107 ~~~fDlvivp~HD~~~~~s~----~~~Nilpi-~Gs~h~Vt~~~lAa~~e~~~~~~--p~~rq~vAVlVGg~nk~f~~~~  179 (329)
T COG3660         107 YNHFDLVIVPYHDWREELSD----QGPNILPI-NGSPHNVTSQRLAALREAFKHLL--PLPRQRVAVLVGGNNKAFVFQE  179 (329)
T ss_pred             cccceEEeccchhhhhhhhc----cCCceeec-cCCCCcccHHHhhhhHHHHHhhC--CCCCceEEEEecCCCCCCccCH
Confidence            23467777776555544221    12333332 44432221111 11223333333  55556788889865443332  


Q ss_pred             ---HHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh-----hC-CcEEEeCcc--CHHHHHHHHHhcCEEEeCCCC
Q 011355          309 ---PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-----LG-TNVIVLGPL--DQTRLAMFYNAIDIFVNPTLR  377 (488)
Q Consensus       309 ---~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-----l~-~~V~~~g~v--~~~~l~~~~~~adv~v~ps~~  377 (488)
                         ..+..++.+..++     ....+++--+-...+..+.     +. .-..+...-  +..-..+++++||.+|.+.  
T Consensus       180 d~a~q~~~~l~k~l~~-----~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~Ta--  252 (329)
T COG3660         180 DKAHQFASLLVKILEN-----QGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTA--  252 (329)
T ss_pred             HHHHHHHHHHHHHHHh-----CCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEec--
Confidence               2333444333332     2345555543222222222     22 223333322  3345789999999999854  


Q ss_pred             CCCCChHHHHHHHcCCcEEEeCCCCc
Q 011355          378 AQGLDHTVLEAMLSGKPLMATRLASI  403 (488)
Q Consensus       378 ~eg~~~~~lEAma~G~PVI~~~~~~~  403 (488)
                       ++ =....||.+.|+||-+..-++.
T Consensus       253 -DS-inM~sEAasTgkPv~~~~~~~~  276 (329)
T COG3660         253 -DS-INMCSEAASTGKPVFILEPPNF  276 (329)
T ss_pred             -ch-hhhhHHHhccCCCeEEEecCCc
Confidence             22 2367899999999988654443

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes

Probab=97.34  E-value=0.0066  Score=55.52  Aligned_cols=42  Identities=17%  Similarity=0.304  Sum_probs=35.0

Q ss_pred             eEEEEEec-CCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 011355           77 LKIALFVK-KWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC  120 (488)
Q Consensus        77 mkIl~i~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  120 (488)
                      |+|++++. .||.  ..||++..+.+|++.|.+..+.|..++...
T Consensus         1 ~~V~ll~EGtYPy--v~GGVSsW~~~LI~glpe~~F~v~~i~a~~   43 (268)
T PF11997_consen    1 MDVCLLTEGTYPY--VRGGVSSWVHQLIRGLPEHEFHVYAIGANP   43 (268)
T ss_pred             CeEEEEecCcCCC--CCCchhHHHHHHHhcCCCceEEEEEEeCCc
Confidence            78999976 5777  899999999999999988767777777664

It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=97.33  E-value=0.11  Score=49.40  Aligned_cols=94  Identities=16%  Similarity=0.072  Sum_probs=61.3

Q ss_pred             EEEEEEeeeccccCh--HHHHHHHHHhHhhccCCCCCeEEEEE-eCCCchhHHhhh---CCcEEEeCccCHHHHHHHHHh
Q 011355          294 LVLGMAGRLVKDKGH--PLMFEALKQLLAENDTFRRSTVFLVA-GDGPWGARYRDL---GTNVIVLGPLDQTRLAMFYNA  367 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~iv-G~g~~~~~~~~l---~~~V~~~g~v~~~~l~~~~~~  367 (488)
                      ++++..|.-.+.|..  +...+.+..+.+      .+..+++. |...+.+..+++   ..++.+.|..+-.|+..+++.
T Consensus       180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~------~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~  253 (322)
T PRK10964        180 YLVFLHATTRDDKHWPEAHWRELIGLLAP------SGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAG  253 (322)
T ss_pred             eEEEEeCCCcccccCCHHHHHHHHHHHHH------CCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHh
Confidence            554445543445554  356676666654      24566675 543344333333   245778898888999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeC
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATR  399 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~  399 (488)
                      ||++|..-.   |   .+-=|.|+|+|+|+-=
T Consensus       254 a~l~I~nDS---G---p~HlA~A~g~p~valf  279 (322)
T PRK10964        254 AKAVVSVDT---G---LSHLTAALDRPNITLY  279 (322)
T ss_pred             CCEEEecCC---c---HHHHHHHhCCCEEEEE
Confidence            999997431   2   4455899999999853

>PLN02554 UDP-glycosyltransferase family protein

Probab=97.32  E-value=0.062  Score=54.02  Aligned_cols=191  Identities=14%  Similarity=0.069  Sum_probs=97.4

Q ss_pred             hhcCCccEEEEcChhhHH-HHHHHhc-C--CCCcEEEecCCccCCCcCCC--cccchhhhhhhCCCCCCcEEEEEEeeec
Q 011355          230 KFFPKYAHHVATSDHCGD-VLKRIYM-I--PEERVHVILNGVDEEVFKPD--VAMGKDFKKKFGIPENRSLVLGMAGRLV  303 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~-~~~~~~g-~--~~~~i~vi~ngvd~~~~~~~--~~~~~~~r~~~~i~~~~~~~i~~~Grl~  303 (488)
                      ..+.+++.+++.|-...+ .....+. .  ...++..|+.-+........  .....++.+-++-.+.++.+.+.+|+..
T Consensus       206 ~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~  285 (481)
T PLN02554        206 RRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMG  285 (481)
T ss_pred             HhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccc
Confidence            456789999998854333 2222221 0  11245555443221111000  1111234444443333446777888863


Q ss_pred             c--ccChHHHHHHHHHhHhhccCCCCCeEEEEEeC---------CC--c-----h-hHHhhhCCcEEEeCccCHHHHHHH
Q 011355          304 K--DKGHPLMFEALKQLLAENDTFRRSTVFLVAGD---------GP--W-----G-ARYRDLGTNVIVLGPLDQTRLAMF  364 (488)
Q Consensus       304 ~--~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~---------g~--~-----~-~~~~~l~~~V~~~g~v~~~~l~~~  364 (488)
                      .  .+.+..++.+++..   .    .++-+++-+.         +.  .     . ...+...+++.+.+++|+.++...
T Consensus       286 ~~~~~~~~~la~~l~~~---~----~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H  358 (481)
T PLN02554        286 GFSEEQAREIAIALERS---G----HRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAK  358 (481)
T ss_pred             cCCHHHHHHHHHHHHHc---C----CCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCC
Confidence            2  33444555555443   2    2232222111         00  0     0 111224567888899997754221


Q ss_pred             HHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeC-------------C-CHHHHHH
Q 011355          365 YNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFS-------------P-QVESVKK  426 (488)
Q Consensus       365 ~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~-------------~-d~~~la~  426 (488)
                       .++..||  ++  -|+ ++++||+.+|+|+|+-...+    ....+++.-+.|..++             . +.+++++
T Consensus       359 -~~v~~Fv--tH--~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~  432 (481)
T PLN02554        359 -PAIGGFV--TH--CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIER  432 (481)
T ss_pred             -cccCccc--cc--Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHH
Confidence             3444455  32  343 58999999999999976443    1101233334555542             3 7899999


Q ss_pred             HHHHHHh
Q 011355          427 ALYGIWA  433 (488)
Q Consensus       427 ~i~~ll~  433 (488)
                      +|.+++.
T Consensus       433 av~~vm~  439 (481)
T PLN02554        433 GIRCLME  439 (481)
T ss_pred             HHHHHhc
Confidence            9999997

>PLN02670 transferase, transferring glycosyl groups

Probab=97.30  E-value=0.014  Score=58.14  Aligned_cols=228  Identities=13%  Similarity=0.014  Sum_probs=118.4

Q ss_pred             hhcCCccEEEEcChhhHH-HHHHHhcCC-CCcEEEecCCccC-CCcCCCc-cc---chhhhhhhCCCCCCcEEEEEEeee
Q 011355          230 KFFPKYAHHVATSDHCGD-VLKRIYMIP-EERVHVILNGVDE-EVFKPDV-AM---GKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~-~~~~~~g~~-~~~i~vi~ngvd~-~~~~~~~-~~---~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      ....+++.+++.|-...+ .+.+.+.-. ..++.-|+.-+.. ..-.... ..   ..++.+-++-.+.+..+.+.+|+.
T Consensus       209 ~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~  288 (472)
T PLN02670        209 FAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTE  288 (472)
T ss_pred             hhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEeccc
Confidence            345788999988854333 222222100 1245555433211 0000000 00   023444454433444777788887


Q ss_pred             cc--ccChHHHHHHHHHhHhhccCCCCCeEEEEEeC-CCchhHHhhh---------CCcEEEeCccCHHHHHHHHHhcCE
Q 011355          303 VK--DKGHPLMFEALKQLLAENDTFRRSTVFLVAGD-GPWGARYRDL---------GTNVIVLGPLDQTRLAMFYNAIDI  370 (488)
Q Consensus       303 ~~--~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~-g~~~~~~~~l---------~~~V~~~g~v~~~~l~~~~~~adv  370 (488)
                      ..  .+.+..+..++...   .    ..+-.++-.. +...+....+         +..+.+.+|+|+.+   +++...+
T Consensus       289 ~~l~~~q~~ela~gl~~s---~----~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~---IL~H~~v  358 (472)
T PLN02670        289 ASLRREEVTELALGLEKS---E----TPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVK---ILSHESV  358 (472)
T ss_pred             ccCCHHHHHHHHHHHHHC---C----CCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHH---HhcCccc
Confidence            42  23334444444443   2    2333333221 1101101111         13377789999775   5666666


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeC------C-CHHHHHHHHHHHHhcCH-HH
Q 011355          371 FVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFS------P-QVESVKKALYGIWADGR-EV  438 (488)
Q Consensus       371 ~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~------~-d~~~la~~i~~ll~~~~-~~  438 (488)
                      ..+-++  -| -++++||+++|+|+|+-...+    .. ..+...+.|+.++      . +.+++.++|.+++.+++ +.
T Consensus       359 ~~FvtH--cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na-~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~  434 (472)
T PLN02670        359 GGFLTH--CG-WNSVVEGLGFGRVLILFPVLNEQGLNT-RLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEE  434 (472)
T ss_pred             ceeeec--CC-cchHHHHHHcCCCEEeCcchhccHHHH-HHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHH
Confidence            444443  34 358999999999999976443    11 2334456777663      2 68999999999997621 12


Q ss_pred             HHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Q 011355          439 LEKKGLVARKRGLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       439 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                      +++-.++.++.+.++=..+++++.+.+.+.+..
T Consensus       435 ~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~  467 (472)
T PLN02670        435 IRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR  467 (472)
T ss_pred             HHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence            333333334444444466777777777666544

>PLN02167 UDP-glycosyltransferase family protein

Probab=97.29  E-value=0.078  Score=53.23  Aligned_cols=188  Identities=14%  Similarity=0.069  Sum_probs=96.8

Q ss_pred             hhcCCccEEEEcChhhHH-HHHHHhc-C--CCCcEEEecCCccCCC-cC-C-CcccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          230 KFFPKYAHHVATSDHCGD-VLKRIYM-I--PEERVHVILNGVDEEV-FK-P-DVAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~-~~~~~~g-~--~~~~i~vi~ngvd~~~-~~-~-~~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      ....++|.|++.|-...+ ...+.+. .  ...++..|..-..... .. . ......++.+-+.-.+.++.+.+..|++
T Consensus       211 ~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~  290 (475)
T PLN02167        211 ERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSL  290 (475)
T ss_pred             HhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeeccc
Confidence            345789999998854433 2222221 0  0124554443221110 00 0 0111133444454444444677788886


Q ss_pred             cc--ccChHHHHHHHHHhHhhccCCCCCeEEE-EEeCCCc---------h-hHHhhhCCcEEEeCccCHHHHHHHHHhcC
Q 011355          303 VK--DKGHPLMFEALKQLLAENDTFRRSTVFL-VAGDGPW---------G-ARYRDLGTNVIVLGPLDQTRLAMFYNAID  369 (488)
Q Consensus       303 ~~--~Kg~~~ll~a~~~l~~~~~~~~~~~~l~-ivG~g~~---------~-~~~~~l~~~V~~~g~v~~~~l~~~~~~ad  369 (488)
                      ..  .+.+..+..+++..         +..++ +++....         . ...+...++..+.+++|+.+   +++...
T Consensus       291 ~~~~~~~~~ela~~l~~~---------~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~---iL~h~~  358 (475)
T PLN02167        291 GSLPAPQIKEIAQALELV---------GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVE---ILAHKA  358 (475)
T ss_pred             ccCCHHHHHHHHHHHHhC---------CCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHH---HhcCcc
Confidence            32  23344444444443         22333 3332111         0 11112334557789999775   555544


Q ss_pred             --EEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---c-eeecCCceeEeC---------C-CHHHHHHHHHHHHh
Q 011355          370 --IFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---S-VIVGTDMGYLFS---------P-QVESVKKALYGIWA  433 (488)
Q Consensus       370 --v~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e-~v~~~~~g~l~~---------~-d~~~la~~i~~ll~  433 (488)
                        .||.   + -|+ ++++||+++|+|+|+-...+-..   . ++..-+.|+.+.         . +.++++++|.+++.
T Consensus       359 vg~fvt---H-~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~  433 (475)
T PLN02167        359 IGGFVS---H-CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMD  433 (475)
T ss_pred             cCeEEe---e-CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhc
Confidence              4554   2 354 48999999999999875433110   1 123335565542         2 78999999999997


Q ss_pred             c
Q 011355          434 D  434 (488)
Q Consensus       434 ~  434 (488)
                      +
T Consensus       434 ~  434 (475)
T PLN02167        434 G  434 (475)
T ss_pred             C
Confidence            6

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]

Probab=97.27  E-value=0.18  Score=47.96  Aligned_cols=311  Identities=14%  Similarity=0.071  Sum_probs=152.2

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCc--ch-hHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKR--GHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGY--LD-QSIV  151 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~-~~~~  151 (488)
                      ||++++. .|  +....|-+-.+..+.++|++.  ..+|.+++..++...      ..+... ..|.....  .. ....
T Consensus         1 m~~~L~g-~~--g~gN~Gdeail~all~~l~~~~~~~~~~~~~~~p~~i~------~p~~~~-~~p~~~~~~l~g~~k~v   70 (385)
T COG2327           1 MKALLLG-YY--GFGNIGDEAILKALLDMLRRLNPDAKVLVMGRRPPVIV------DPVFLS-ANPEGSAAGLNGRVKSV   70 (385)
T ss_pred             CeeEEEe-ee--cCCCcccHHHHHHHHHHHHhhCcccceeeeecCCcccc------cceeec-CCcccCchhhhHHHHHH
Confidence            6766665 44  336778888899999999866  567777777652211      111111 11111011  11 1111


Q ss_pred             HHHHH------HHhcCCCCCcEEEeCCcc-----------------hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhc
Q 011355          152 WQQLQ------TQNSTGKPFDVIHTESVG-----------------LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLR  208 (488)
Q Consensus       152 ~~~~~------~~~~~~~~~Dvv~~~~~~-----------------~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~  208 (488)
                      .++..      .......+.|++++...+                 +......+.| ++..-|+..+             
T Consensus        71 ~R~~~k~~~~~~il~~l~~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la~l~~kp-~~~~g~svGP-------------  136 (385)
T COG2327          71 LRRRLKHPGLVSILSALGKADLIIIGGGGLLQDVTSSRSIIYYGGSILLARLAGKP-TFFFGQSVGP-------------  136 (385)
T ss_pred             HHHhhccccHHHHHHHhhhCCEEEEcCcccccCccccceehhhHHHHHHHHHcCCC-EEEEeccCCC-------------
Confidence            11111      122222278999886321                 1111223456 6666666432             


Q ss_pred             CCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCC
Q 011355          209 TPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGI  288 (488)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i  288 (488)
                       ...+.++++..         ..++.++.+++-.+...+.++. .|++.....      |..+.-+.........  .+.
T Consensus       137 -~~~~~s~~~~~---------~~~~~~s~i~vRD~~S~~llk~-~gi~a~l~~------D~Af~L~~~~~~~~~~--~~~  197 (385)
T COG2327         137 -LKHPLSRQLLN---------YVLGGCSAISVRDPVSYELLKQ-LGINARLVT------DPAFLLPASSQNATAS--DVE  197 (385)
T ss_pred             -ccCHHHHHHHH---------HHhcCCcEEEEecHHhHHHHHH-cCCCeEeec------Ccceeccccccccccc--ccc
Confidence             12222222222         3467788888888888888885 787543222      4332221111100000  011


Q ss_pred             CCCCcEEEEEEeeeccccChH-----HHHHHHHHhHhhccCCCCCeEEEE--EeCCCchhHHhh----hC--CcEEEeCc
Q 011355          289 PENRSLVLGMAGRLVKDKGHP-----LMFEALKQLLAENDTFRRSTVFLV--AGDGPWGARYRD----LG--TNVIVLGP  355 (488)
Q Consensus       289 ~~~~~~~i~~~Grl~~~Kg~~-----~ll~a~~~l~~~~~~~~~~~~l~i--vG~g~~~~~~~~----l~--~~V~~~g~  355 (488)
                      .+.+ .+.+..-.+.+.+..+     .+-+++..+..+..   ...++..  .+...+....+.    ..  +++.+..-
T Consensus       198 ~~~~-~~~i~lr~~~~~~t~~~~~~~~v~~~l~~~~~~~~---~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d  273 (385)
T COG2327         198 AREK-TVAITLRGLHPDNTAQRSILKYVNEALDLVERQVK---ALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSD  273 (385)
T ss_pred             cccc-eEEEEecccCCchhhhHHHHHHHHHHHHHHHHhhh---cceEEEeeeccccchhHHHHHHHhhcCCccceEeecc
Confidence            1222 2333333343332222     22333333311110   3333333  333222221221    22  56666553


Q ss_pred             cCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeec-CCceeEeC--C-CHHHHHHHHHHH
Q 011355          356 LDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG-TDMGYLFS--P-QVESVKKALYGI  431 (488)
Q Consensus       356 v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~-~~~g~l~~--~-d~~~la~~i~~l  431 (488)
                      ...+++...+++||++|..-++      .++=|++.|+|+|+-....=...+.++ +-.++..+  + |.+.+.+...+.
T Consensus       274 ~~~~~~~~~l~~~dl~Vg~R~H------saI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~  347 (385)
T COG2327         274 EYAEELGGILAACDLIVGMRLH------SAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLER  347 (385)
T ss_pred             hHHHHHHHHhccCceEEeehhH------HHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCchHHHHHHHHHH
Confidence            2246788899999999985543      677899999999997554322111111 22333333  4 889999998888


Q ss_pred             HhcCHHHHH
Q 011355          432 WADGREVLE  440 (488)
Q Consensus       432 l~~~~~~~~  440 (488)
                      +.+.++.++
T Consensus       348 ~~~~~~~~~  356 (385)
T COG2327         348 LTKLDELRE  356 (385)
T ss_pred             HhccHHHHh
Confidence            887444443

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.27  E-value=0.047  Score=52.67  Aligned_cols=95  Identities=13%  Similarity=0.063  Sum_probs=63.1

Q ss_pred             cEEEEEEeeeccccCh--HHHHHHHHHhHhhccCCCCCeEEEEEeCCCc--hhHHhhh----C--CcEEEeCccCHHHHH
Q 011355          293 SLVLGMAGRLVKDKGH--PLMFEALKQLLAENDTFRRSTVFLVAGDGPW--GARYRDL----G--TNVIVLGPLDQTRLA  362 (488)
Q Consensus       293 ~~~i~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~--~~~~~~l----~--~~V~~~g~v~~~~l~  362 (488)
                      +++++..|.-.+.|..  +...+.+..+.+      .+..+++.|...+  .+..+++    .  ..+.+.|..+-.|+.
T Consensus       184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~------~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~  257 (352)
T PRK10422        184 NYVVIQPTARQIFKCWDNDKFSAVIDALQA------RGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELG  257 (352)
T ss_pred             CeEEEecCCCccccCCCHHHHHHHHHHHHH------CCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHH
Confidence            4677788876666765  356666666654      3567788875322  2212222    1  235678888889999


Q ss_pred             HHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeC
Q 011355          363 MFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATR  399 (488)
Q Consensus       363 ~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~  399 (488)
                      .+++.||++|..-    + | .+-=|.|.|+|+|+--
T Consensus       258 ali~~a~l~v~nD----S-G-p~HlAaA~g~P~v~lf  288 (352)
T PRK10422        258 ALIDHAQLFIGVD----S-A-PAHIAAAVNTPLICLF  288 (352)
T ss_pred             HHHHhCCEEEecC----C-H-HHHHHHHcCCCEEEEE
Confidence            9999999999733    2 1 4455889999999853

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=97.27  E-value=0.043  Score=52.40  Aligned_cols=96  Identities=21%  Similarity=0.245  Sum_probs=67.2

Q ss_pred             CcEEEEEEe-eeccccChH--HHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhC----CcEEEeCccCHHHHHHH
Q 011355          292 RSLVLGMAG-RLVKDKGHP--LMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLG----TNVIVLGPLDQTRLAMF  364 (488)
Q Consensus       292 ~~~~i~~~G-rl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~----~~V~~~g~v~~~~l~~~  364 (488)
                      ++.+++..| +....|...  ...+.+..+.++      ..+++++|...+.+..+++.    ..+.+.|..+-+|+..+
T Consensus       175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~------~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~l  248 (334)
T COG0859         175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAK------GYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAAL  248 (334)
T ss_pred             CCeEEEeccccccccCCCCHHHHHHHHHHHHHC------CCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHH
Confidence            346777888 665777653  556666666653      36888889775555544433    23338898889999999


Q ss_pred             HHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeC
Q 011355          365 YNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATR  399 (488)
Q Consensus       365 ~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~  399 (488)
                      ++.||++|.+..   |   .+-=|.|.|+|+|+--
T Consensus       249 i~~a~l~I~~DS---g---~~HlAaA~~~P~I~iy  277 (334)
T COG0859         249 IAGADLVIGNDS---G---PMHLAAALGTPTIALY  277 (334)
T ss_pred             HhcCCEEEccCC---h---HHHHHHHcCCCEEEEE
Confidence            999999997542   2   3444899999999853

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=97.20  E-value=0.013  Score=60.83  Aligned_cols=198  Identities=18%  Similarity=0.198  Sum_probs=133.3

Q ss_pred             cEEEecCCccCCCcCCCcc------cchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEE
Q 011355          259 RVHVILNGVDEEVFKPDVA------MGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFL  332 (488)
Q Consensus       259 ~i~vi~ngvd~~~~~~~~~------~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~  332 (488)
                      .+..+|-|+|...+.....      ...++++.+   .++ .+++-+-+++.-||+..=+.++.++..+++++++++.++
T Consensus       240 ~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~---~g~-klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvli  315 (732)
T KOG1050|consen  240 SVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPF---KGK-KLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLI  315 (732)
T ss_pred             eeeecccccchHHhhccccchhHHHHHHHHhhhc---cCC-ceEecccccccccCchHHHHHHHHHHHhChhhhceEEEE
Confidence            3445666777665533221      123333333   244 567778899999999999999999999998777888887


Q ss_pred             EEeCCCc--h---hHHhh----------------hCCcE-EEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHH
Q 011355          333 VAGDGPW--G---ARYRD----------------LGTNV-IVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAML  390 (488)
Q Consensus       333 ivG~g~~--~---~~~~~----------------l~~~V-~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma  390 (488)
                      .+..+..  .   +.++.                ....| .+...++..++.+++..+|+.+..+.+ +|..++.+|+..
T Consensus       316 qi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~r-dGmnl~~~e~i~  394 (732)
T KOG1050|consen  316 QIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWR-DGMNLVFLEYIL  394 (732)
T ss_pred             EEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccc-cccchhhhHHHH
Confidence            7764321  1   11221                11233 455678999999999999999998975 999999999998


Q ss_pred             cC----CcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 011355          391 SG----KPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYER  465 (488)
Q Consensus       391 ~G----~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~  465 (488)
                      |.    .+.|.+.+-|.. +.+  +....++.+ |.++++.+|...++.+.+.++..-...+.++.. .+....++.+..
T Consensus       395 ~~~~~~~~lVlsef~G~~-~tl--~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~-~~~~~W~~~~~~  470 (732)
T KOG1050|consen  395 CQENKKSVLVLSEFIGDD-TTL--EDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVST-HDVVYWAKSFLQ  470 (732)
T ss_pred             hhcccCCceEEeeecccc-ccc--cccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcc-hhHHHHHHHHHH
Confidence            85    677888877765 333  345578888 999999999999998555555444444444322 344444444444

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=97.19  E-value=0.21  Score=46.96  Aligned_cols=147  Identities=16%  Similarity=0.134  Sum_probs=83.4

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeec--cccC
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV--KDKG  307 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~--~~Kg  307 (488)
                      +.++++|.+.+-.+...+.+++ +|+   ++.+.+..+   ..-+.... .   ..  ...+++.+.+.+....  ..+.
T Consensus       123 ~~l~~~~~i~vRD~~S~~~l~~-~g~---~i~~~~D~a---~~l~~~~~-~---~~--~~~~~~~i~i~~r~~~~~~~~~  189 (298)
T TIGR03609       123 RVLRGCRAISVRDAASYRLLKR-LGI---PAELAADPV---WLLPPEPW-P---GG--EPLPEPVIVVSLRPWPLLDVSR  189 (298)
T ss_pred             HHHccCCEEEEeCHHHHHHHHH-hCC---CceEeCChh---hhCCCCcc-c---cc--ccCCCCeEEEEECCCCcCCHHH
Confidence            4578899999988888888876 776   355555432   21111000 0   00  0112223333332211  1223


Q ss_pred             hHHHHHHHHHhHhhccCCCCCeEEEEEeC--CCchhHHhh----hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCC
Q 011355          308 HPLMFEALKQLLAENDTFRRSTVFLVAGD--GPWGARYRD----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGL  381 (488)
Q Consensus       308 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG~--g~~~~~~~~----l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~  381 (488)
                      .+.+.+++..+.++.     +.+++++.-  +.+.+..++    +.+...+....+.+|+..++++||++|...++    
T Consensus       190 ~~~l~~~l~~l~~~~-----g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~RlH----  260 (298)
T TIGR03609       190 LLRLLRALDRLQRDT-----GAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRLH----  260 (298)
T ss_pred             HHHHHHHHHHHHHhh-----CCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEechH----
Confidence            556777777776653     445555443  222222222    22222333556788999999999999986654    


Q ss_pred             ChHHHHHHHcCCcEEEeCC
Q 011355          382 DHTVLEAMLSGKPLMATRL  400 (488)
Q Consensus       382 ~~~~lEAma~G~PVI~~~~  400 (488)
                        .++=|+.+|+|+|+-..
T Consensus       261 --~~I~A~~~gvP~i~i~y  277 (298)
T TIGR03609       261 --ALILAAAAGVPFVALSY  277 (298)
T ss_pred             --HHHHHHHcCCCEEEeec
Confidence              56779999999997643

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>PLN02555 limonoid glucosyltransferase

Probab=97.18  E-value=0.16  Score=50.75  Aligned_cols=203  Identities=14%  Similarity=0.017  Sum_probs=103.9

Q ss_pred             hhcCCccEEEEcChhhHH-HHHHHhcCCCCcEEEecCCccCCC-c-CC--C--cccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          230 KFFPKYAHHVATSDHCGD-VLKRIYMIPEERVHVILNGVDEEV-F-KP--D--VAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~-~~~~~~g~~~~~i~vi~ngvd~~~-~-~~--~--~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      ....+++.+++.|-...+ ...+.+.- ..++..|..-+.... . ..  .  ........+-++-.+.+..+.+.+|++
T Consensus       209 ~~~~~a~~vlvNTf~eLE~~~~~~l~~-~~~v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~  287 (480)
T PLN02555        209 KNLDKPFCILIDTFQELEKEIIDYMSK-LCPIKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTV  287 (480)
T ss_pred             HhcccCCEEEEEchHHHhHHHHHHHhh-CCCEEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccc
Confidence            456788999998854433 22222311 113555544321110 0 00  0  011123333443333333677788876


Q ss_pred             ccccChHHHHHHHHHhHhhccCCCCCeEEEEE-eCC-----C----ch-hHHhhhCCcEEEeCccCHHHHHHHHHhcCEE
Q 011355          303 VKDKGHPLMFEALKQLLAENDTFRRSTVFLVA-GDG-----P----WG-ARYRDLGTNVIVLGPLDQTRLAMFYNAIDIF  371 (488)
Q Consensus       303 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~g-----~----~~-~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~  371 (488)
                      .. -..+.+.+.+..+...      +..++.+ ...     .    .. ...+...+++.+.+++|+.++... .++.+|
T Consensus       288 ~~-~~~~q~~ela~~l~~~------~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H-~~v~~F  359 (480)
T PLN02555        288 VY-LKQEQIDEIAYGVLNS------GVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAH-PSVACF  359 (480)
T ss_pred             cC-CCHHHHHHHHHHHHhc------CCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCC-CccCeE
Confidence            42 2223344444434332      2344433 311     0    11 223335578888999997654322 445556


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecC-CceeEeC-------C-CHHHHHHHHHHHHhcCHHH
Q 011355          372 VNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGT-DMGYLFS-------P-QVESVKKALYGIWADGREV  438 (488)
Q Consensus       372 v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~-~~g~l~~-------~-d~~~la~~i~~ll~~~~~~  438 (488)
                      |.   + -| -++++||+.+|+|+|+-..-+    .. ..+.+. +.|+-+.       . +.++++++|.+++.+ ++ 
T Consensus       360 vt---H-~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na-~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~-~~-  431 (480)
T PLN02555        360 VT---H-CG-WNSTMEALSSGVPVVCFPQWGDQVTDA-VYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVG-EK-  431 (480)
T ss_pred             Ee---c-CC-cchHHHHHHcCCCEEeCCCccccHHHH-HHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcC-ch-
Confidence            64   2 34 358999999999999976543    11 223333 5666651       2 689999999999975 32 


Q ss_pred             HHHHHHHHHHH
Q 011355          439 LEKKGLVARKR  449 (488)
Q Consensus       439 ~~~~~~~a~~~  449 (488)
                      -++|++++++.
T Consensus       432 g~~~r~ra~~l  442 (480)
T PLN02555        432 AAELKQNALKW  442 (480)
T ss_pred             HHHHHHHHHHH
Confidence            34444444443

>PLN00164 glucosyltransferase; Provisional

Probab=97.18  E-value=0.32  Score=48.90  Aligned_cols=95  Identities=15%  Similarity=0.097  Sum_probs=60.1

Q ss_pred             CcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----ccccee-ecCCceeEeC----
Q 011355          348 TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVI-VGTDMGYLFS----  418 (488)
Q Consensus       348 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v-~~~~~g~l~~----  418 (488)
                      ..+.+.+++|+.+   +++.+++..+-++  -|+ ++++||+.+|+|+|+-..-+    .. ..+ ..-+.|+.+.    
T Consensus       339 ~g~~v~~w~PQ~~---iL~h~~vg~fvtH--~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na-~~~~~~~gvG~~~~~~~~  411 (480)
T PLN00164        339 RGLVWPTWAPQKE---ILAHAAVGGFVTH--CGW-NSVLESLWHGVPMAPWPLYAEQHLNA-FELVADMGVAVAMKVDRK  411 (480)
T ss_pred             CCeEEeecCCHHH---HhcCcccCeEEee--ccc-chHHHHHHcCCCEEeCCccccchhHH-HHHHHHhCeEEEeccccc
Confidence            4477779999774   5667776444343  354 48999999999999975433    11 122 2335666552    


Q ss_pred             ---C-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011355          419 ---P-QVESVKKALYGIWADGREVLEKKGLVARKR  449 (488)
Q Consensus       419 ---~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~  449 (488)
                         . +.++++++|.+++.++.++.+++.+++.+.
T Consensus       412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~  446 (480)
T PLN00164        412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM  446 (480)
T ss_pred             cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence               2 679999999999976222244444444433

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=97.13  E-value=0.055  Score=50.27  Aligned_cols=96  Identities=20%  Similarity=0.168  Sum_probs=63.2

Q ss_pred             EEEEEEeeeccccC--hHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh-----C-CcEEEeCccCHHHHHHHH
Q 011355          294 LVLGMAGRLVKDKG--HPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL-----G-TNVIVLGPLDQTRLAMFY  365 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg--~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l-----~-~~V~~~g~v~~~~l~~~~  365 (488)
                      .+++..|.-.+.|.  .+...+.++.+.+      .+++++++|..++.+..+++     . ..+.+.|..+-.|+..++
T Consensus       123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~------~~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li  196 (279)
T cd03789         123 VVVLPPGASGPAKRWPAERFAALADRLLA------RGARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALL  196 (279)
T ss_pred             EEEECCCCCCccccCCHHHHHHHHHHHHH------CCCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHH
Confidence            44445555444454  3566777777765      24678888876555444432     1 335567777788999999


Q ss_pred             HhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCC
Q 011355          366 NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLA  401 (488)
Q Consensus       366 ~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~  401 (488)
                      +.||++|.+-    + | .+--|.+.|+|+|+--.+
T Consensus       197 ~~~~l~I~~D----s-g-~~HlA~a~~~p~i~l~g~  226 (279)
T cd03789         197 ARADLVVTND----S-G-PMHLAAALGTPTVALFGP  226 (279)
T ss_pred             HhCCEEEeeC----C-H-HHHHHHHcCCCEEEEECC
Confidence            9999999743    2 2 444467999999986433

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=97.01  E-value=0.19  Score=47.75  Aligned_cols=96  Identities=17%  Similarity=0.092  Sum_probs=63.1

Q ss_pred             CCcEEEEEEeeeccccCh--HHHHHHHHHhHhhccCCCCCeEEEEEeCCCc-hhHHhhh---CCcEEEeCccCHHHHHHH
Q 011355          291 NRSLVLGMAGRLVKDKGH--PLMFEALKQLLAENDTFRRSTVFLVAGDGPW-GARYRDL---GTNVIVLGPLDQTRLAMF  364 (488)
Q Consensus       291 ~~~~~i~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~-~~~~~~l---~~~V~~~g~v~~~~l~~~  364 (488)
                      +++.+++..|.-.+.|..  +...+.+..+.+      .+..+++.|.++. .+..+++   .++..+.|..+-.|+..+
T Consensus       178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~------~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~al  251 (319)
T TIGR02193       178 PAPYAVLLHATSRDDKTWPEERWRELARLLLA------RGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAAL  251 (319)
T ss_pred             CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHH------CCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHH
Confidence            344677777765566765  456666666654      2456777754443 2333332   234567788888899999


Q ss_pred             HHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEe
Q 011355          365 YNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT  398 (488)
Q Consensus       365 ~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~  398 (488)
                      ++.||++|..-    +.  .+-=|.|.|+|+|+-
T Consensus       252 i~~a~l~I~~D----Sg--p~HlAaa~g~P~i~l  279 (319)
T TIGR02193       252 LAGADAVVGVD----TG--LTHLAAALDKPTVTL  279 (319)
T ss_pred             HHcCCEEEeCC----Ch--HHHHHHHcCCCEEEE
Confidence            99999999743    21  344478999999985

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=97.01  E-value=0.11  Score=47.84  Aligned_cols=152  Identities=16%  Similarity=0.188  Sum_probs=85.5

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChH
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHP  309 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~  309 (488)
                      +.+++++.+.+-.+...+.+.+ .|++. ++.++|..+=.  ....... .. ..+   +......+..........-.+
T Consensus       123 ~~l~~~~~i~vRD~~S~~~l~~-~g~~~-~~~~~~D~af~--l~~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~  193 (286)
T PF04230_consen  123 RILSKADYISVRDEYSYELLKK-LGISG-NVKLVPDPAFL--LPPSYPD-ED-KSK---PKRNYISVSNSPSRNNEEYIE  193 (286)
T ss_pred             HHHhCCCEEEECCHHHHHHHHH-cCCCC-CcEEEeCchhh--cCccccc-cc-ccc---cccceeeeccccchhhhhHHH
Confidence            4567789988888888886665 78765 77877765411  1111000 00 000   011101111111112233345


Q ss_pred             HHHHHHHHhHhhccCCCCCeEEEEEeCCCchh---HH------hhh-CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCC
Q 011355          310 LMFEALKQLLAENDTFRRSTVFLVAGDGPWGA---RY------RDL-GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ  379 (488)
Q Consensus       310 ~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~---~~------~~l-~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~e  379 (488)
                      .+.+.+..+.++.    ..+.+......+...   ..      ... ..........+.+++..+++.||++|....+  
T Consensus       194 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH--  267 (286)
T PF04230_consen  194 EIAELIQRLLDKG----YKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRLH--  267 (286)
T ss_pred             HHHHHHHHhhccc----ceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCCH--
Confidence            5666777766644    445554444322111   11      111 1334455567899999999999999987764  


Q ss_pred             CCChHHHHHHHcCCcEEEeCC
Q 011355          380 GLDHTVLEAMLSGKPLMATRL  400 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~  400 (488)
                          ..+=|+++|+|+|+-+.
T Consensus       268 ----~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  268 ----GAILALSLGVPVIAISY  284 (286)
T ss_pred             ----HHHHHHHcCCCEEEEec
Confidence                46779999999998654

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PLN03004 UDP-glycosyltransferase

Probab=97.00  E-value=0.15  Score=50.62  Aligned_cols=190  Identities=14%  Similarity=0.045  Sum_probs=102.4

Q ss_pred             hhcCCccEEEEcChhhHH-HHHHHhc--CCCCcEEEecCCccCCCcCCC-cccchhhhhhhCCCCCCcEEEEEEeeecc-
Q 011355          230 KFFPKYAHHVATSDHCGD-VLKRIYM--IPEERVHVILNGVDEEVFKPD-VAMGKDFKKKFGIPENRSLVLGMAGRLVK-  304 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~-~~~~~~g--~~~~~i~vi~ngvd~~~~~~~-~~~~~~~r~~~~i~~~~~~~i~~~Grl~~-  304 (488)
                      ..+.++|.+++.|-+..+ .+.+.+.  ....++.-|..-+........ ........+-++-.+.++.+.+.+|+... 
T Consensus       204 ~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~  283 (451)
T PLN03004        204 KQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLF  283 (451)
T ss_pred             HhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccC
Confidence            446778899988854433 2223231  111245555443211110000 00112233444433344477888888732 


Q ss_pred             -ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc-------hh-----HH-hh-hCCcEEEeCccCHHHHHHHHHhcC
Q 011355          305 -DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW-------GA-----RY-RD-LGTNVIVLGPLDQTRLAMFYNAID  369 (488)
Q Consensus       305 -~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~-------~~-----~~-~~-l~~~V~~~g~v~~~~l~~~~~~ad  369 (488)
                       .+....+..++...   .    ..+- ..+.....       .+     .+ ++ .+.++.+.+|+|+.+   +++.++
T Consensus       284 ~~~q~~ela~gL~~s---~----~~Fl-W~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~---iL~H~~  352 (451)
T PLN03004        284 SKEQVIEIAVGLEKS---G----QRFL-WVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP---VLNHKA  352 (451)
T ss_pred             CHHHHHHHHHHHHHC---C----CCEE-EEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH---HhCCCc
Confidence             23344444444443   2    2222 33332110       01     01 11 136899999999775   678888


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeec-CCceeEeC-----C-CHHHHHHHHHHHHhc
Q 011355          370 IFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVG-TDMGYLFS-----P-QVESVKKALYGIWAD  434 (488)
Q Consensus       370 v~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~-~~~g~l~~-----~-d~~~la~~i~~ll~~  434 (488)
                      +..+-++  -| -++++||+++|+|+|+....+    .. ..+.+ -+.|..++     . +.++++++|.+++.+
T Consensus       353 v~~FvTH--~G-~nS~lEal~~GVP~v~~P~~~DQ~~na-~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~  424 (451)
T PLN03004        353 VGGFVTH--CG-WNSILEAVCAGVPMVAWPLYAEQRFNR-VMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE  424 (451)
T ss_pred             cceEecc--Cc-chHHHHHHHcCCCEEeccccccchhhH-HHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC
Confidence            8444453  34 358999999999999975433    22 23333 36676664     3 789999999999986

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=96.94  E-value=0.22  Score=46.79  Aligned_cols=149  Identities=19%  Similarity=0.196  Sum_probs=86.3

Q ss_pred             cCCccEEEEcChhhHHHHHHHhcC-CCCcEEEec---CCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecccc-
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYMI-PEERVHVIL---NGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK-  306 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g~-~~~~i~vi~---ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~K-  306 (488)
                      ...+|.||++.++         +. ...++....   |.++.+...   ..+..+..+++-.+ ++.+.+.+|.-...- 
T Consensus        95 ~~~FDlvi~p~HD---------~~~~~~Nvl~t~ga~~~i~~~~l~---~a~~~~~~~~~~l~-~p~~avLIGG~s~~~~  161 (311)
T PF06258_consen   95 PRPFDLVIVPEHD---------RLPRGPNVLPTLGAPNRITPERLA---EAAAAWAPRLAALP-RPRVAVLIGGDSKHYR  161 (311)
T ss_pred             ccccCEEEECccc---------CcCCCCceEecccCCCcCCHHHHH---HHHHhhhhhhccCC-CCeEEEEECcCCCCcc
Confidence            3567888998765         22 223333322   333322111   11223334444222 335666777533322 


Q ss_pred             -Ch---HHHHHHHHHhHhhccCCCCCeEEEEEeCCCch----hHHhhh---CCcEEEeCccCHHHHHHHHHhcCEEEeCC
Q 011355          307 -GH---PLMFEALKQLLAENDTFRRSTVFLVAGDGPWG----ARYRDL---GTNVIVLGPLDQTRLAMFYNAIDIFVNPT  375 (488)
Q Consensus       307 -g~---~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~----~~~~~l---~~~V~~~g~v~~~~l~~~~~~adv~v~ps  375 (488)
                       +-   ..+++.+..+.+..     ...+.|..+....    +.+++.   ...+.+.+.-+..-+..+|+.||.++.+.
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~-----~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~  236 (311)
T PF06258_consen  162 WDEEDAERLLDQLAALAAAY-----GGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTE  236 (311)
T ss_pred             cCHHHHHHHHHHHHHHHHhC-----CCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcC
Confidence             22   25667777777665     4788888864322    233332   25665555545556889999999999854


Q ss_pred             CCCCCCChHHHHHHHcCCcEEEeCCCC
Q 011355          376 LRAQGLDHTVLEAMLSGKPLMATRLAS  402 (488)
Q Consensus       376 ~~~eg~~~~~lEAma~G~PVI~~~~~~  402 (488)
                         ++ -..+.||++.|+||.....++
T Consensus       237 ---DS-vSMvsEA~~tG~pV~v~~l~~  259 (311)
T PF06258_consen  237 ---DS-VSMVSEAAATGKPVYVLPLPG  259 (311)
T ss_pred             ---cc-HHHHHHHHHcCCCEEEecCCC
Confidence               33 347899999999999988776

The function of this family is unknown.

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=96.76  E-value=0.081  Score=52.51  Aligned_cols=141  Identities=14%  Similarity=0.134  Sum_probs=82.3

Q ss_pred             hhhhhhCCCCCCcEEEEEEeeec--cccChHHHHHHHHHhHhhccCCCCCeEEEEEeC--------CCc-------hhHH
Q 011355          281 DFKKKFGIPENRSLVLGMAGRLV--KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGD--------GPW-------GARY  343 (488)
Q Consensus       281 ~~r~~~~i~~~~~~~i~~~Grl~--~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~--------g~~-------~~~~  343 (488)
                      ++.+-++-.+.++.+.+.+|++.  +.+....+..++....       ..+-.++-+.        +..       ....
T Consensus       250 ~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~-------~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~  322 (455)
T PLN02152        250 SYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGK-------RPFLWVITDKLNREAKIEGEEETEIEKIAGFR  322 (455)
T ss_pred             HHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcC-------CCeEEEEecCcccccccccccccccccchhHH
Confidence            34555554444457788889864  3344555556555542       2233333221        010       1112


Q ss_pred             hhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeecC-CceeEeC-
Q 011355          344 RDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVGT-DMGYLFS-  418 (488)
Q Consensus       344 ~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~-~~g~l~~-  418 (488)
                      +...++..+.+++|+.+   +++..++..+-++  -| .++++||+.+|+|+|+-...+-..   ..+.+. +.|+-+. 
T Consensus       323 e~~~~~g~v~~W~PQ~~---iL~h~~vg~fvtH--~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~  396 (455)
T PLN02152        323 HELEEVGMIVSWCSQIE---VLRHRAVGCFVTH--CG-WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRE  396 (455)
T ss_pred             HhccCCeEEEeeCCHHH---HhCCcccceEEee--CC-cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeec
Confidence            23557788889999664   6777777555453  34 458999999999999975433110   122221 2344431 


Q ss_pred             ----C-CHHHHHHHHHHHHhc
Q 011355          419 ----P-QVESVKKALYGIWAD  434 (488)
Q Consensus       419 ----~-d~~~la~~i~~ll~~  434 (488)
                          . +.+++++++.+++.+
T Consensus       397 ~~~~~~~~e~l~~av~~vm~~  417 (455)
T PLN02152        397 NSEGLVERGEIRRCLEAVMEE  417 (455)
T ss_pred             CcCCcCcHHHHHHHHHHHHhh
Confidence                2 689999999999976

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=96.76  E-value=0.34  Score=46.59  Aligned_cols=94  Identities=16%  Similarity=0.109  Sum_probs=61.7

Q ss_pred             cEEEEEEeeeccccCh--HHHHHHHHHhHhhccCCCCCeEEEEEeCCC--chhHHhhh----C-C-cEEEeCccCHHHHH
Q 011355          293 SLVLGMAGRLVKDKGH--PLMFEALKQLLAENDTFRRSTVFLVAGDGP--WGARYRDL----G-T-NVIVLGPLDQTRLA  362 (488)
Q Consensus       293 ~~~i~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~--~~~~~~~l----~-~-~V~~~g~v~~~~l~  362 (488)
                      +++++..|.-.+.|..  +...+.+..+.+      .+..+++.|...  +.+..+++    . . .+.+.|..+-.|+.
T Consensus       182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~------~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~  255 (344)
T TIGR02201       182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA------RGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLA  255 (344)
T ss_pred             CEEEEeCCCCccccCCCHHHHHHHHHHHHh------CCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHH
Confidence            3666677765566654  455566666654      346788888543  22222332    2 2 24578888888999


Q ss_pred             HHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEe
Q 011355          363 MFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT  398 (488)
Q Consensus       363 ~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~  398 (488)
                      .+++.||++|..-    +  ..+-=|.|.|+|+|+-
T Consensus       256 ali~~a~l~Vs~D----S--Gp~HlAaA~g~p~v~L  285 (344)
T TIGR02201       256 ALIDHARLFIGVD----S--VPMHMAAALGTPLVAL  285 (344)
T ss_pred             HHHHhCCEEEecC----C--HHHHHHHHcCCCEEEE
Confidence            9999999999743    2  1455589999999985

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=96.71  E-value=0.021  Score=56.47  Aligned_cols=152  Identities=18%  Similarity=0.149  Sum_probs=103.9

Q ss_pred             EEEEEEeee-ccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEE
Q 011355          294 LVLGMAGRL-VKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFV  372 (488)
Q Consensus       294 ~~i~~~Grl-~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v  372 (488)
                      ..++| |.- .-.||-+..++++.+.        -+++-.|.+...   ....+..-|.-+|.++.+|+..+++.+.++|
T Consensus       279 ~AlVy-GK~~~~w~~k~~~l~~l~~~--------~eih~tV~~~~~---~~~~~P~~V~NHG~l~~~ef~~lL~~akvfi  346 (559)
T PF15024_consen  279 QALVY-GKERYMWKGKEKYLDVLHKY--------MEIHGTVYDEPQ---RPPNVPSFVKNHGILSGDEFQQLLRKAKVFI  346 (559)
T ss_pred             eeEEE-ccchhhhcCcHHHHHHHHhh--------cEEEEEeccCCC---CCcccchhhhhcCcCCHHHHHHHHHhhhEee
Confidence            33433 543 3457777788777654        466766665432   2223445688899999999999999999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc--------------c---------eeecCCceeEeCC-CHHHHHHHH
Q 011355          373 NPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG--------------S---------VIVGTDMGYLFSP-QVESVKKAL  428 (488)
Q Consensus       373 ~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~--------------e---------~v~~~~~g~l~~~-d~~~la~~i  428 (488)
                      ....-.||  =+.+||++.|+|.|-........              +         ........+.|+- |.+++.++|
T Consensus       347 GlGfP~Eg--PaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Av  424 (559)
T PF15024_consen  347 GLGFPYEG--PAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAV  424 (559)
T ss_pred             ecCCCCCC--CChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHH
Confidence            86542354  38999999999998765432110              1         0122334667777 999999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          429 YGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       429 ~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                      .+++++..          .-++--.|+.+.+.+++..+++.
T Consensus       425 k~il~~~v----------~Py~P~efT~egmLeRv~~~ie~  455 (559)
T PF15024_consen  425 KAILATPV----------EPYLPYEFTCEGMLERVNALIEK  455 (559)
T ss_pred             HHHHhcCC----------CCcCCcccCHHHHHHHHHHHHHh
Confidence            99998821          23455568999999999777754

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=96.69  E-value=0.031  Score=57.45  Aligned_cols=130  Identities=19%  Similarity=0.243  Sum_probs=91.5

Q ss_pred             CCCcEEEEEEeeeccccChHHHHHHHHHhHhhcc-CCCCCeEEEEEeC-CCchhH----Hhh------h---CCcEEEeC
Q 011355          290 ENRSLVLGMAGRLVKDKGHPLMFEALKQLLAEND-TFRRSTVFLVAGD-GPWGAR----YRD------L---GTNVIVLG  354 (488)
Q Consensus       290 ~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~-~~~~~~~l~ivG~-g~~~~~----~~~------l---~~~V~~~g  354 (488)
                      ++. +.++++-|+..+|...+.+.-...+..... +..|.+.+++.|+ .|....    ++.      .   ..+|.|+.
T Consensus       485 p~~-lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~  563 (750)
T COG0058         485 PNA-LFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLP  563 (750)
T ss_pred             CCc-ceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeC
Confidence            344 888899999999988765543333332220 1116677888886 232211    111      1   25689998


Q ss_pred             ccCHHHHHHHHHhcCEEEeCCCC-CCCCChHHHHHHHcCCcEEEeCCCCcccceee--cCCceeEeCCCH
Q 011355          355 PLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIV--GTDMGYLFSPQV  421 (488)
Q Consensus       355 ~v~~~~l~~~~~~adv~v~ps~~-~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~--~~~~g~l~~~d~  421 (488)
                      ..+-+-...++.+|||-.+.|+. -|..|..-+-++..|.+.|+|--|... |+.+  .+++|++|..+.
T Consensus       564 nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanv-Ei~e~vg~~N~~~fG~~~  632 (750)
T COG0058         564 NYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANV-EIYEHVGGENGWIFGETV  632 (750)
T ss_pred             CCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHH-HHHHhcCCCceEEeCCch
Confidence            87766777889999998886652 477788889999999999999888887 7765  889999998633

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=96.48  E-value=0.67  Score=46.41  Aligned_cols=81  Identities=12%  Similarity=0.077  Sum_probs=55.7

Q ss_pred             CcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---cee-ecCCceeEeC----C
Q 011355          348 TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVI-VGTDMGYLFS----P  419 (488)
Q Consensus       348 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v-~~~~~g~l~~----~  419 (488)
                      .++.+.+|+|+.+   +++...+..+-++  -| -++++||+.+|+|+|+-...+-..   ..+ +.-+.|..++    .
T Consensus       338 rg~vv~~W~PQ~~---iL~h~~vg~FitH--~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~  411 (481)
T PLN02992        338 RGFVVPSWAPQAE---ILAHQAVGGFLTH--CG-WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEV  411 (481)
T ss_pred             CCEEEeecCCHHH---HhCCcccCeeEec--Cc-hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCc
Confidence            4688999999775   5566666333342  34 458999999999999976543110   233 2445666663    2


Q ss_pred             -CHHHHHHHHHHHHhc
Q 011355          420 -QVESVKKALYGIWAD  434 (488)
Q Consensus       420 -d~~~la~~i~~ll~~  434 (488)
                       +.++++++|.+++.+
T Consensus       412 ~~~~~l~~av~~vm~~  427 (481)
T PLN02992        412 ISRSKIEALVRKVMVE  427 (481)
T ss_pred             ccHHHHHHHHHHHhcC
Confidence             789999999999976

>PRK14986 glycogen phosphorylase; Provisional

Probab=95.95  E-value=0.055  Score=56.41  Aligned_cols=138  Identities=14%  Similarity=0.159  Sum_probs=97.3

Q ss_pred             CCCCCcEEEEEEeeeccccChHH-HHHHHH---HhHhhccCCCCCeEEEEEeCC-CchhH----Hhh-------------
Q 011355          288 IPENRSLVLGMAGRLVKDKGHPL-MFEALK---QLLAENDTFRRSTVFLVAGDG-PWGAR----YRD-------------  345 (488)
Q Consensus       288 i~~~~~~~i~~~Grl~~~Kg~~~-ll~a~~---~l~~~~~~~~~~~~l~ivG~g-~~~~~----~~~-------------  345 (488)
                      +.++. +.++++-|+..+|...+ ++..+.   ++++....-..+..+++.|+. |....    ++.             
T Consensus       539 ldp~s-Lfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~  617 (815)
T PRK14986        539 VNPKA-LFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQ  617 (815)
T ss_pred             cCccc-ceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChh
Confidence            34444 78889999999999887 555544   444321000024788888863 32211    111             


Q ss_pred             hCC--cEEEeCccCHHHHHHHHHhcCEEEeCCC-CCCCCChHHHHHHHcCCcEEEeCCCCcccceeec--CCceeEeCCC
Q 011355          346 LGT--NVIVLGPLDQTRLAMFYNAIDIFVNPTL-RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG--TDMGYLFSPQ  420 (488)
Q Consensus       346 l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~-~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~--~~~g~l~~~d  420 (488)
                      ..+  +|.|+...+-+--..++.+||+-.+-|+ --|..|..-+=+|..|.+.+++--|... |+.++  +++|+.|..+
T Consensus       618 v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nv-Ei~e~vG~eN~~~fG~~  696 (815)
T PRK14986        618 IGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANV-EMLEHVGEENIFIFGNT  696 (815)
T ss_pred             hcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchh-HHHHhcCCCcEEEeCCC
Confidence            123  6999988777777889999999998666 2477788889999999999999888887 76665  8899999876


Q ss_pred             HHHHHHH
Q 011355          421 VESVKKA  427 (488)
Q Consensus       421 ~~~la~~  427 (488)
                      ++++.+.
T Consensus       697 ~~ev~~~  703 (815)
T PRK14986        697 AEEVEAL  703 (815)
T ss_pred             HHHHHHH
Confidence            6666654

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=95.65  E-value=0.68  Score=44.96  Aligned_cols=189  Identities=14%  Similarity=0.161  Sum_probs=113.6

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccc--hhhhhhhCCCCCCcEEEEEEeeecccc-
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG--KDFKKKFGIPENRSLVLGMAGRLVKDK-  306 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~--~~~r~~~~i~~~~~~~i~~~Grl~~~K-  306 (488)
                      ......|.+.+.+......+.+.+|+..+++..++.+-....+.......  ......+++|.++ .+|+|.-.+.+.. 
T Consensus       144 ~~~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k-~vIlyaPTfr~~~~  222 (388)
T COG1887         144 YVRNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDK-KVILYAPTFRDNDV  222 (388)
T ss_pred             eeeeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccC-ceEEecCCccCCcc
Confidence            44567888899888888888888998888777766554433333322221  2234556677676 7788998887665 


Q ss_pred             --C---hHHHH--HHHHHhHhhccCCCCCeEEEEEeCCCchh-HHh---hhCCcEEEeCccCHHHHHHHHHhcCEEEeCC
Q 011355          307 --G---HPLMF--EALKQLLAENDTFRRSTVFLVAGDGPWGA-RYR---DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPT  375 (488)
Q Consensus       307 --g---~~~ll--~a~~~l~~~~~~~~~~~~l~ivG~g~~~~-~~~---~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps  375 (488)
                        |   ....+  +.+.+...+     .+..++ +=.+|... ...   +..+.+.....  ..++.++|..+|++|.  
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~-----~~~~ii-~k~Hp~is~~~~~~~~~~~~~~~vs~--~~di~dll~~sDiLIT--  292 (388)
T COG1887         223 LIGTQFFNLDIDIEKLKEKLGE-----NEYVII-VKPHPLISDKIDKRYALDDFVLDVSD--NADINDLLLVSDILIT--  292 (388)
T ss_pred             ccchhhhhhhhhHHHHHHhhcc-----CCeEEE-EecChhhhhhhhhhhhccceeEeccc--chhHHHHHhhhCEEEe--
Confidence              2   22222  223222221     244444 33344321 111   12232333333  5899999999999995  


Q ss_pred             CCCCCCChHHHHHHHcCCcEEEeCCCCccc----ce---eecCCceeEeCCCHHHHHHHHHHHHhc
Q 011355          376 LRAQGLDHTVLEAMLSGKPLMATRLASIVG----SV---IVGTDMGYLFSPQVESVKKALYGIWAD  434 (488)
Q Consensus       376 ~~~eg~~~~~lEAma~G~PVI~~~~~~~~~----e~---v~~~~~g~l~~~d~~~la~~i~~ll~~  434 (488)
                          .++.+..|+|...+|||..-.....-    ..   ......|-++. +.+++.++|.....+
T Consensus       293 ----DySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~-~~~~li~ai~~~~~~  353 (388)
T COG1887         293 ----DYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVE-TQEELIDAIKPYDED  353 (388)
T ss_pred             ----echHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccc-cHHHHHHHHHhhhcc
Confidence                24669999999999999863322100    00   12223455555 788999999888875

>PLN03015 UDP-glucosyl transferase

Probab=95.56  E-value=2.9  Score=41.77  Aligned_cols=78  Identities=21%  Similarity=0.095  Sum_probs=50.6

Q ss_pred             EEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---cee-ecCCceeEeC------C
Q 011355          350 VIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVI-VGTDMGYLFS------P  419 (488)
Q Consensus       350 V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v-~~~~~g~l~~------~  419 (488)
                      +.+.+|+|+.++   ++...+..+-++  -| -++++||+.+|+|+|+-..-+-..   ..+ +.-+.|.-+.      .
T Consensus       337 l~v~~W~PQ~~v---L~h~~vg~fvtH--~G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~  410 (470)
T PLN03015        337 LVVTQWAPQVEI---LSHRSIGGFLSH--CG-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKV  410 (470)
T ss_pred             eEEEecCCHHHH---hccCccCeEEec--CC-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCc
Confidence            677899997765   445555333343  34 358999999999999976533110   112 2334455442      2


Q ss_pred             -CHHHHHHHHHHHHh
Q 011355          420 -QVESVKKALYGIWA  433 (488)
Q Consensus       420 -d~~~la~~i~~ll~  433 (488)
                       +.++++++|.+++.
T Consensus       411 v~~e~i~~~v~~lm~  425 (470)
T PLN03015        411 IGREEVASLVRKIVA  425 (470)
T ss_pred             cCHHHHHHHHHHHHc
Confidence             78999999999995

>PLN02534 UDP-glycosyltransferase

Probab=95.52  E-value=3  Score=42.00  Aligned_cols=190  Identities=14%  Similarity=0.076  Sum_probs=96.0

Q ss_pred             CCccEEEEcChhhHH-HHHHHhcC-CCCcEEEecCCccCCC-----cC-CC--cccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          233 PKYAHHVATSDHCGD-VLKRIYMI-PEERVHVILNGVDEEV-----FK-PD--VAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~-~~~~~~g~-~~~~i~vi~ngvd~~~-----~~-~~--~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      ..++.|++.|-...+ .+.+.+.- -..++..|..-+....     .. ..  ..+....-+-++-.+.++.+.+.+|+.
T Consensus       214 ~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~  293 (491)
T PLN02534        214 STAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSL  293 (491)
T ss_pred             ccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEeccc
Confidence            457788888855444 22222210 1135665554332110     00 00  001123444454444445777788887


Q ss_pred             ccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCC--Cc-h-----hHHh-h-hCCcEEEeCccCHHHHHHHHHhcCEEE
Q 011355          303 VKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDG--PW-G-----ARYR-D-LGTNVIVLGPLDQTRLAMFYNAIDIFV  372 (488)
Q Consensus       303 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g--~~-~-----~~~~-~-l~~~V~~~g~v~~~~l~~~~~~adv~v  372 (488)
                      .. -..+.+.+.+.-|....    ..+-.++-.++  +. .     +.+. . .+.++.+.|++++.+   ++...++..
T Consensus       294 ~~-~~~~q~~e~a~gl~~~~----~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~---iL~h~~v~~  365 (491)
T PLN02534        294 CR-LVPSQLIELGLGLEASK----KPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVL---ILSHPAIGG  365 (491)
T ss_pred             cc-CCHHHHHHHHHHHHhCC----CCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHH---HhcCCccce
Confidence            52 22333444444443333    33333333111  11 0     1112 2 246788889999754   677777744


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---c-eeecCCceeEe--------------C-C-CHHHHHHHHHHHH
Q 011355          373 NPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---S-VIVGTDMGYLF--------------S-P-QVESVKKALYGIW  432 (488)
Q Consensus       373 ~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e-~v~~~~~g~l~--------------~-~-d~~~la~~i~~ll  432 (488)
                      +-++  -| .++++||+++|+|+|+-...+-..   . +++.-+.|+-+              . . +.+++++++.+++
T Consensus       366 fvtH--~G-~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m  442 (491)
T PLN02534        366 FLTH--CG-WNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLM  442 (491)
T ss_pred             EEec--Cc-cHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHh
Confidence            4342  34 469999999999999976533110   0 11111122211              0 1 6899999999999


Q ss_pred             h
Q 011355          433 A  433 (488)
Q Consensus       433 ~  433 (488)
                      .
T Consensus       443 ~  443 (491)
T PLN02534        443 D  443 (491)
T ss_pred             c
Confidence            6

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=95.37  E-value=0.12  Score=53.95  Aligned_cols=138  Identities=14%  Similarity=0.149  Sum_probs=96.4

Q ss_pred             CCCCCcEEEEEEeeeccccChHH-HHHH---HHHhHhhccCCCCCeEEEEEeCC-CchhHHhh-----------------
Q 011355          288 IPENRSLVLGMAGRLVKDKGHPL-MFEA---LKQLLAENDTFRRSTVFLVAGDG-PWGARYRD-----------------  345 (488)
Q Consensus       288 i~~~~~~~i~~~Grl~~~Kg~~~-ll~a---~~~l~~~~~~~~~~~~l~ivG~g-~~~~~~~~-----------------  345 (488)
                      +.++. +..+++-|+..+|...+ ++..   +.++++....-..+..+++.|+. |....-++                 
T Consensus       526 ldp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~  604 (797)
T cd04300         526 VDPDS-LFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPD  604 (797)
T ss_pred             cCCCc-cEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChh
Confidence            34555 78889999999999887 5554   44444321000023778888863 32211111                 


Q ss_pred             hCC--cEEEeCccCHHHHHHHHHhcCEEEeCCC-CCCCCChHHHHHHHcCCcEEEeCCCCcccceeec--CCceeEeCCC
Q 011355          346 LGT--NVIVLGPLDQTRLAMFYNAIDIFVNPTL-RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG--TDMGYLFSPQ  420 (488)
Q Consensus       346 l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~-~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~--~~~g~l~~~d  420 (488)
                      ..+  +|.|+...+-+--..++.+||+-.+-|+ -.|..|..-+=+|..|.+.++|--|... |+.++  ++++++|-.+
T Consensus       605 v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanv-Ei~e~vG~eN~fiFG~~  683 (797)
T cd04300         605 VGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV-EIAEEVGEENIFIFGLT  683 (797)
T ss_pred             cCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhH-HHHHHhCcCcEEEeCCC
Confidence            123  6999988777777889999999988665 2477788889999999999999888877 77665  7899999876


Q ss_pred             HHHHHHH
Q 011355          421 VESVKKA  427 (488)
Q Consensus       421 ~~~la~~  427 (488)
                      ++++.+.
T Consensus       684 ~~ev~~~  690 (797)
T cd04300         684 AEEVEAL  690 (797)
T ss_pred             HHHHHHH
Confidence            6666544

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes

Probab=95.36  E-value=0.15  Score=42.14  Aligned_cols=128  Identities=16%  Similarity=0.151  Sum_probs=68.2

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQL  155 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      |||+++.+.      .||..+.   +++.|.+. .|+++++|.....-                     .|+.....-.+
T Consensus         1 M~ILlle~y------~ggSHk~---~~~~L~~~~~~~~~lltLP~r~w---------------------~WRmRg~AL~~   50 (168)
T PF12038_consen    1 MRILLLEPY------YGGSHKQ---WADGLAAHSEHEWTLLTLPARKW---------------------HWRMRGAALYF   50 (168)
T ss_pred             CeEEEEccc------cccCHHH---HHHHHHHhccCCEEEEEcCCCcc---------------------ccccCCCHHHH
Confidence            899999973      4666654   33444333 58999998854211                     12211111111


Q ss_pred             HHHhcCCCCCcEEEeCCcc-hHHhhh-----ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhH-HHHHHHHHHHHHH
Q 011355          156 QTQNSTGKPFDVIHTESVG-LRHTRA-----RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQA-YALAERASKVVEE  228 (488)
Q Consensus       156 ~~~~~~~~~~Dvv~~~~~~-~~~~~~-----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  228 (488)
                      .........+|+|++.+.. +..+++     ...| .++.+|+.-..+            |..+.. +...-.+..+   
T Consensus        51 a~~~~~~~~~dll~aTsmldLa~l~gL~p~l~~~p-~ilYFHENQl~Y------------P~~~~~~rd~~~~~~ni---  114 (168)
T PF12038_consen   51 AQQIPLSHSYDLLFATSMLDLATLRGLRPDLANVP-KILYFHENQLAY------------PVSPGQERDFQYGMNNI---  114 (168)
T ss_pred             hhccccccCCCEEEeeccccHHHHHhhccCCCCCC-EEEEEecCcccC------------CCCCCccccccHHHHHH---
Confidence            1222222278999998742 222221     2446 899999854332            211111 1111112222   


Q ss_pred             hhhcCCccEEEEcChhhHHHHHH
Q 011355          229 VKFFPKYAHHVATSDHCGDVLKR  251 (488)
Q Consensus       229 ~~~~~~~d~ii~~S~~~~~~~~~  251 (488)
                       ...-.||.|+.+|.+.++.+.+
T Consensus       115 -~saLaAD~v~FNS~~nr~sFL~  136 (168)
T PF12038_consen  115 -YSALAADRVVFNSAFNRDSFLD  136 (168)
T ss_pred             -HHHHhceeeeecchhhHHHHHH
Confidence             2234799999999998887765

It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.22  E-value=0.83  Score=47.29  Aligned_cols=192  Identities=19%  Similarity=0.254  Sum_probs=111.4

Q ss_pred             CCccEEEEcChhhHHHHHH-----HhcCCCCcEEEecCCccCCCcCCC--cc---------------------------c
Q 011355          233 PKYAHHVATSDHCGDVLKR-----IYMIPEERVHVILNGVDEEVFKPD--VA---------------------------M  278 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~-----~~g~~~~~i~vi~ngvd~~~~~~~--~~---------------------------~  278 (488)
                      ..+..+-.+|+-..+.+++     ++.+.+.++.-+-|||.....-..  +.                           +
T Consensus       330 ~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~d  409 (713)
T PF00343_consen  330 RGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFAD  409 (713)
T ss_dssp             HCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCC
T ss_pred             HhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhC
Confidence            4556778888776666543     455667889999999977544211  10                           0


Q ss_pred             -------------------chhhhhhhC--CCCCCcEEEEEEeeeccccChHH-HH---HHHHHhHhhccCCCCCeEEEE
Q 011355          279 -------------------GKDFKKKFG--IPENRSLVLGMAGRLVKDKGHPL-MF---EALKQLLAENDTFRRSTVFLV  333 (488)
Q Consensus       279 -------------------~~~~r~~~~--i~~~~~~~i~~~Grl~~~Kg~~~-ll---~a~~~l~~~~~~~~~~~~l~i  333 (488)
                                         ...++++.+  +.++. +..+++-|+..+|...+ ++   +-+.++++.-..-..++.+++
T Consensus       410 d~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~s-lfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IF  488 (713)
T PF00343_consen  410 DEEFQEELREVKQENKERLAEYIKKRTGVELDPDS-LFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIF  488 (713)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTS-EEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcch-hhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEE
Confidence                               011222333  44555 78889999999999877 33   444455543100003588999


Q ss_pred             EeCC-Cchh----HHhh-------------hCC--cEEEeCccCHHHHHHHHHhcCEEEeCCCC-CCCCChHHHHHHHcC
Q 011355          334 AGDG-PWGA----RYRD-------------LGT--NVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSG  392 (488)
Q Consensus       334 vG~g-~~~~----~~~~-------------l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~~-~eg~~~~~lEAma~G  392 (488)
                      .|+. |...    .++.             +.+  +|.|+...+-+--..++.++||-...|++ .|..|..-+=+|..|
T Consensus       489 aGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NG  568 (713)
T PF00343_consen  489 AGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNG  568 (713)
T ss_dssp             E----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT
T ss_pred             eccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCC
Confidence            9962 3221    1111             123  69999987777788899999999986663 488899999999999


Q ss_pred             CcEEEeCCCCcccceeec--CCceeEeCCCHHHHHH
Q 011355          393 KPLMATRLASIVGSVIVG--TDMGYLFSPQVESVKK  426 (488)
Q Consensus       393 ~PVI~~~~~~~~~e~v~~--~~~g~l~~~d~~~la~  426 (488)
                      .+.+++--|... |+.+.  .++.++|-.+.+++.+
T Consensus       569 aL~lstlDG~ni-Ei~e~vG~eN~fiFG~~~~ev~~  603 (713)
T PF00343_consen  569 ALNLSTLDGWNI-EIAEAVGEENIFIFGLTAEEVEE  603 (713)
T ss_dssp             -EEEEESSTCHH-HHHHHH-GGGSEEES-BHHHHHH
T ss_pred             CeEEecccchhH-HHHHhcCCCcEEEcCCCHHHHHH
Confidence            999999888877 66543  4678888766666544

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=94.92  E-value=0.082  Score=54.97  Aligned_cols=138  Identities=20%  Similarity=0.189  Sum_probs=95.9

Q ss_pred             CCCCCcEEEEEEeeeccccChHH-HHHHHHHhHh--hccC-CCCCeEEEEEeCC-CchhHHhh-----------------
Q 011355          288 IPENRSLVLGMAGRLVKDKGHPL-MFEALKQLLA--ENDT-FRRSTVFLVAGDG-PWGARYRD-----------------  345 (488)
Q Consensus       288 i~~~~~~~i~~~Grl~~~Kg~~~-ll~a~~~l~~--~~~~-~~~~~~l~ivG~g-~~~~~~~~-----------------  345 (488)
                      +.++. +..+++-|+..+|...+ ++..+..+.+  ..++ ...+..+++.|+. |....-++                 
T Consensus       525 ldp~s-lfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~  603 (798)
T PRK14985        525 INPQA-IFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPL  603 (798)
T ss_pred             cCchh-cchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChh
Confidence            44444 77888999999999877 6555443332  1210 0023788888863 32211111                 


Q ss_pred             hCC--cEEEeCccCHHHHHHHHHhcCEEEeCCC-CCCCCChHHHHHHHcCCcEEEeCCCCcccceeec--CCceeEeCCC
Q 011355          346 LGT--NVIVLGPLDQTRLAMFYNAIDIFVNPTL-RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG--TDMGYLFSPQ  420 (488)
Q Consensus       346 l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~-~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~--~~~g~l~~~d  420 (488)
                      ..+  +|.|+...+-+--..++.+||+-..-|+ -.|..|..-+=+|..|.+.++|--|... |+.++  +++|+.|-.+
T Consensus       604 v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanv-Ei~e~vG~eN~f~fG~~  682 (798)
T PRK14985        604 VGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANV-EIAEQVGEENIFIFGHT  682 (798)
T ss_pred             hCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHH-HHHHHhCcCcEEEeCCC
Confidence            123  6999998777778889999999988665 2477788889999999999999888877 66654  7899999876


Q ss_pred             HHHHHHH
Q 011355          421 VESVKKA  427 (488)
Q Consensus       421 ~~~la~~  427 (488)
                      ++++.+.
T Consensus       683 ~~ev~~~  689 (798)
T PRK14985        683 VEQVKAL  689 (798)
T ss_pred             HHHHHHH
Confidence            6666554

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=94.88  E-value=0.45  Score=48.37  Aligned_cols=133  Identities=21%  Similarity=0.164  Sum_probs=76.6

Q ss_pred             EEEEEEeeecc-----ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchh-HHhhh----CCcEEEeCccCHHHHHH
Q 011355          294 LVLGMAGRLVK-----DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGA-RYRDL----GTNVIVLGPLDQTRLAM  363 (488)
Q Consensus       294 ~~i~~~Grl~~-----~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~-~~~~l----~~~V~~~g~v~~~~l~~  363 (488)
                      .+++..|+...     .+-...+..++..+        +++.++..=.++... ..+.+    ..+|...+|+|+.++. 
T Consensus       279 vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~--------~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~ll-  349 (496)
T KOG1192|consen  279 VVYISFGSMVNSADLPEEQKKELAKALESL--------QGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLL-  349 (496)
T ss_pred             eEEEECCcccccccCCHHHHHHHHHHHHhC--------CCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHh-
Confidence            67777888753     34445566666665        355555444332221 12223    3479999999988766 


Q ss_pred             HHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC--CHHHHHHHHHHHHhcCHH
Q 011355          364 FYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP--QVESVKKALYGIWADGRE  437 (488)
Q Consensus       364 ~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~--d~~~la~~i~~ll~~~~~  437 (488)
                       +...-+-.+-++  .|++ .++|++.+|+|+|+...-+    ....+...+..+.+...  +.+++.+++..++.+ ++
T Consensus       350 -l~H~~v~~FvTH--gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~-~~  424 (496)
T KOG1192|consen  350 -LDHPAVGGFVTH--GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILEN-EE  424 (496)
T ss_pred             -cCCCcCcEEEEC--Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcC-hH
Confidence             333333333343  4665 5599999999999653322    22123344455555443  334488899999887 54


Q ss_pred             HHH
Q 011355          438 VLE  440 (488)
Q Consensus       438 ~~~  440 (488)
                      ..+
T Consensus       425 y~~  427 (496)
T KOG1192|consen  425 YKE  427 (496)
T ss_pred             HHH
Confidence            433

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=94.67  E-value=0.63  Score=42.92  Aligned_cols=84  Identities=23%  Similarity=0.286  Sum_probs=56.1

Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc------hhHHhhh--CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW------GARYRDL--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA  378 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~------~~~~~~l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~  378 (488)
                      ....+++.+..+.+..    |+.+++|-- +|.      ...+.++  ..++.+...  .-++.+++..||.++.-+   
T Consensus       138 ~~~~~~~~l~~~~~~~----p~~~lvvK~-HP~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Ll~~s~~Vvtin---  207 (269)
T PF05159_consen  138 SQADFLDMLESFAKEN----PDAKLVVKP-HPDERGGNKYSYLEELPNLPNVVIIDD--DVNLYELLEQSDAVVTIN---  207 (269)
T ss_pred             cHhHHHHHHHHHHHHC----CCCEEEEEE-CchhhCCCChhHhhhhhcCCCeEEECC--CCCHHHHHHhCCEEEEEC---
Confidence            4556777777777777    777776554 332      1223333  245555544  447889999999988633   


Q ss_pred             CCCChHHHHHHHcCCcEEEeCCCCc
Q 011355          379 QGLDHTVLEAMLSGKPLMATRLASI  403 (488)
Q Consensus       379 eg~~~~~lEAma~G~PVI~~~~~~~  403 (488)
                         +.+-+||+.+|+||++...+-.
T Consensus       208 ---StvGlEAll~gkpVi~~G~~~Y  229 (269)
T PF05159_consen  208 ---STVGLEALLHGKPVIVFGRAFY  229 (269)
T ss_pred             ---CHHHHHHHHcCCceEEecCccc
Confidence               3478999999999999765443

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=94.65  E-value=0.16  Score=53.00  Aligned_cols=138  Identities=14%  Similarity=0.148  Sum_probs=96.2

Q ss_pred             CCCCCcEEEEEEeeeccccChHH-HHHHHH---HhHhhccCCCCCeEEEEEeCC-CchhHHhh-----------------
Q 011355          288 IPENRSLVLGMAGRLVKDKGHPL-MFEALK---QLLAENDTFRRSTVFLVAGDG-PWGARYRD-----------------  345 (488)
Q Consensus       288 i~~~~~~~i~~~Grl~~~Kg~~~-ll~a~~---~l~~~~~~~~~~~~l~ivG~g-~~~~~~~~-----------------  345 (488)
                      +.++. +..+++-|+..+|...+ ++..+.   ++++.-..-..+..+++.|+. |....-++                 
T Consensus       523 ldp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~  601 (794)
T TIGR02093       523 VDPNS-IFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPA  601 (794)
T ss_pred             cCccc-cchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChh
Confidence            34444 77788999999999877 555544   443321000025688888863 32211111                 


Q ss_pred             hCC--cEEEeCccCHHHHHHHHHhcCEEEeCCC-CCCCCChHHHHHHHcCCcEEEeCCCCcccceeec--CCceeEeCCC
Q 011355          346 LGT--NVIVLGPLDQTRLAMFYNAIDIFVNPTL-RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG--TDMGYLFSPQ  420 (488)
Q Consensus       346 l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~-~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~--~~~g~l~~~d  420 (488)
                      ..+  +|.|+...+-+--..++.+||+-.+-|+ -.|..|..-+=+|..|.+.|+|--|... |+.++  ++++++|-.+
T Consensus       602 v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanv-Ei~e~vG~eN~fiFG~~  680 (794)
T TIGR02093       602 VGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV-EIREEVGAENIFIFGLT  680 (794)
T ss_pred             hCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhH-HHHHHhCcccEEEcCCC
Confidence            123  6999998777778889999999988666 2477788889999999999999888877 77665  7899999877


Q ss_pred             HHHHHHH
Q 011355          421 VESVKKA  427 (488)
Q Consensus       421 ~~~la~~  427 (488)
                      ++++.+.
T Consensus       681 ~~ev~~~  687 (794)
T TIGR02093       681 VEEVEAL  687 (794)
T ss_pred             HHHHHHH
Confidence            7766654

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=94.33  E-value=0.41  Score=43.48  Aligned_cols=96  Identities=15%  Similarity=0.134  Sum_probs=58.2

Q ss_pred             CCcEEEEEEeeeccccChH--HHHHHHHHhHhhccCCCCCeEEEEEeCCCc--hhHHhhhC-----CcEEEeCccCHHHH
Q 011355          291 NRSLVLGMAGRLVKDKGHP--LMFEALKQLLAENDTFRRSTVFLVAGDGPW--GARYRDLG-----TNVIVLGPLDQTRL  361 (488)
Q Consensus       291 ~~~~~i~~~Grl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~--~~~~~~l~-----~~V~~~g~v~~~~l  361 (488)
                      +++.+++..|.-.+.|...  ...+.+..+.++      ...++++|...+  .+..+.+.     ..+.+.|..+-.|+
T Consensus       104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~------~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~  177 (247)
T PF01075_consen  104 DKPYIGINPGASWPSKRWPAEKWAELIERLKER------GYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLREL  177 (247)
T ss_dssp             TSSEEEEE---SSGGGS--HHHHHHHHHHHCCC------T-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHH
T ss_pred             cCCeEEEeecCCCccccCCHHHHHHHHHHHHhh------CceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHH
Confidence            4447777888777777754  355555555432      367888887665  23332321     26788898888999


Q ss_pred             HHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEe
Q 011355          362 AMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT  398 (488)
Q Consensus       362 ~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~  398 (488)
                      ..+++.||++|.+-    +  ..+-=|.|.|+|+|+-
T Consensus       178 ~ali~~a~~~I~~D----t--g~~HlA~a~~~p~v~l  208 (247)
T PF01075_consen  178 AALISRADLVIGND----T--GPMHLAAALGTPTVAL  208 (247)
T ss_dssp             HHHHHTSSEEEEES----S--HHHHHHHHTT--EEEE
T ss_pred             HHHHhcCCEEEecC----C--hHHHHHHHHhCCEEEE
Confidence            99999999999843    2  1455599999999986

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=93.81  E-value=0.46  Score=40.28  Aligned_cols=36  Identities=25%  Similarity=0.244  Sum_probs=31.1

Q ss_pred             hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCC
Q 011355          230 KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNG  266 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ng  266 (488)
                      +.-+.+|..++.|+.+++.+.+ .|++++++.+.+-+
T Consensus       133 W~~~~~D~y~Vase~~~~~l~~-~Gi~~~~I~vtGiP  168 (169)
T PF06925_consen  133 WIHPGVDRYFVASEEVKEELIE-RGIPPERIHVTGIP  168 (169)
T ss_pred             eecCCCCEEEECCHHHHHHHHH-cCCChhHEEEeCcc
Confidence            4457899999999999999999 89999999987543

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=92.78  E-value=0.62  Score=43.74  Aligned_cols=71  Identities=10%  Similarity=0.123  Sum_probs=49.4

Q ss_pred             HHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC-cEEEeCCCCcc-cceeecCCceeEeCC-CHHHHHHHHH
Q 011355          358 QTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK-PLMATRLASIV-GSVIVGTDMGYLFSP-QVESVKKALY  429 (488)
Q Consensus       358 ~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~-PVI~~~~~~~~-~e~v~~~~~g~l~~~-d~~~la~~i~  429 (488)
                      ..+..+.|+.+...+.|.-. ..+..-++|||++|| |||.++.--.+ ++++.=....+.++. +..++.+.|+
T Consensus       227 ~~~~~~~l~~S~FCL~p~G~-~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~  300 (302)
T PF03016_consen  227 PSEYMELLRNSKFCLCPRGD-GPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR  300 (302)
T ss_pred             chHHHHhcccCeEEEECCCC-CcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence            45688999999999998743 346889999999996 88887643333 245544566777765 5555555443

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=91.48  E-value=11  Score=34.37  Aligned_cols=118  Identities=14%  Similarity=0.055  Sum_probs=66.8

Q ss_pred             EEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhC---CcE-EEeCccCHHHHHHHHHhcC
Q 011355          294 LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLG---TNV-IVLGPLDQTRLAMFYNAID  369 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~---~~V-~~~g~v~~~~l~~~~~~ad  369 (488)
                      -+++..|+    |.+..+..    ... .    ..+...+......-+...+++   .++ -..|..+.+.=..+++...
T Consensus       131 ~i~lttG~----k~l~~f~~----~~~-~----~~~~~RvLP~~~~l~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~  197 (256)
T TIGR00715       131 RVFLTAGA----SWLSHFSL----SQD-E----AVVFVRVLPYPQALAQALKLGFPSDRIIAMRGPFSEELEKALLREYR  197 (256)
T ss_pred             cEEEecCc----chHHHHhh----ccC-C----ceEEEEECCCchhhHHHHHcCCChhcEEEEeCCCCHHHHHHHHHHcC
Confidence            36667773    55555533    111 1    245555554332333444432   344 4457677666677777555


Q ss_pred             E--EEeC-CCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHH
Q 011355          370 I--FVNP-TLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIW  432 (488)
Q Consensus       370 v--~v~p-s~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll  432 (488)
                      +  +|.= |-...|+.-++--|+.+|+|||.-+-+..+.       .+-.+. +.+++.+.+.+++
T Consensus       198 i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~-------~~~~~~-~~~el~~~l~~~~  255 (256)
T TIGR00715       198 IDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP-------GVAIFD-DISQLNQFVARLL  255 (256)
T ss_pred             CCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC-------CCccCC-CHHHHHHHHHHhc
Confidence            5  4441 2111255678888999999999988765431       112344 7888888777654

This enzyme was found to be a monomer by gel filtration.

>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P

Probab=90.91  E-value=2  Score=40.97  Aligned_cols=104  Identities=16%  Similarity=0.187  Sum_probs=69.0

Q ss_pred             chhhhhhhCCC---CCCcEEEEEEeeeccccC-hHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh---------
Q 011355          279 GKDFKKKFGIP---ENRSLVLGMAGRLVKDKG-HPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD---------  345 (488)
Q Consensus       279 ~~~~r~~~~i~---~~~~~~i~~~Grl~~~Kg-~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~---------  345 (488)
                      +..+.+++|++   ++. +.+..++   ..+. +..+++++....       ..+.++|.++ .-...++.         
T Consensus       168 ~~~~~~~lg~~~~~~~~-~~vslF~---Ye~~~l~~ll~~~~~~~-------~pv~llvp~g-~~~~~~~~~~~~~~~~~  235 (374)
T PF10093_consen  168 RAAFLRRLGLPEPEPGA-LRVSLFC---YENAALASLLDAWAASP-------KPVHLLVPEG-RALNSLAAWLGDALLQA  235 (374)
T ss_pred             HHHHHHHcCCCCCCCCC-eEEEEEe---CCchHHHHHHHHHhcCC-------CCeEEEecCC-ccHHHHHHHhccccccC
Confidence            45677788885   333 4443322   3333 667777776442       4567766664 32222211         


Q ss_pred             ------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCC
Q 011355          346 ------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRL  400 (488)
Q Consensus       346 ------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~  400 (488)
                            -.-.+++++++++++...++-.||+-+.   ++|-   +++=|+.+|+|.|=.-.
T Consensus       236 g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~NfV---RGED---SfVRAqwAgkPFvWhIY  290 (374)
T PF10093_consen  236 GDSWQRGNLTLHVLPFVPQDDYDRLLWACDFNFV---RGED---SFVRAQWAGKPFVWHIY  290 (374)
T ss_pred             ccccccCCeEEEECCCCCHHHHHHHHHhCccceE---ecch---HHHHHHHhCCCceEecC
Confidence                  1135888999999999999999999555   6776   78999999999996544

The function is unknown.

>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia

Probab=90.28  E-value=17  Score=34.48  Aligned_cols=309  Identities=15%  Similarity=0.135  Sum_probs=165.4

Q ss_pred             CCCcHHHHHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHHHhcCCCCCcEE
Q 011355           91 HAGGLERHALTLHLALAKRG--HELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVI  168 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv  168 (488)
                      -..|+..-+.-|+..|++..  ++|.++..++..............+..        ..    +...    ..  +.||+
T Consensus        16 W~NGi~QN~~fL~~lL~qs~~v~~V~Lvn~g~~~~~~~~~~~~~~~~~~--------~~----~~~~----~~--~lDVl   77 (364)
T PF10933_consen   16 WENGINQNCIFLAMLLQQSPRVESVVLVNGGDGNPIPAALMLDLLDVPL--------VD----FDDA----ID--ELDVL   77 (364)
T ss_pred             hhhchhhHHHHHHHHHhhCCCcceEEEEECCCCCcCCcccccccCCCce--------ec----HHHh----cc--cCCEE
Confidence            34678888888999998875  789999876543222111111100000        01    1111    11  68999


Q ss_pred             EeCCcc-----hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcCh
Q 011355          169 HTESVG-----LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSD  243 (488)
Q Consensus       169 ~~~~~~-----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~  243 (488)
                      +-.+..     +....+++.+ ++....|..+...-..   -++..+....               -.-..+|.|.++-+
T Consensus        78 IEmg~ql~~~~~~~~~~~G~K-vV~y~~GndYv~~~E~---~lF~k~~~~~---------------f~~~~yD~VW~lPq  138 (364)
T PF10933_consen   78 IEMGAQLDPEWLDYMRARGGK-VVSYRCGNDYVMDIES---MLFNKPSGHL---------------FNGAPYDEVWTLPQ  138 (364)
T ss_pred             EEccCccCHHHHHHHHHcCCe-EEEEeCCchHHHHhhH---HhcCCCCCcc---------------CCCCCCceeEeccc
Confidence            876543     3344445544 8888887655322111   1122221100               11256787776654


Q ss_pred             hh---HHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCC-cEEE-EEEeeeccccChHHHHHHHHHh
Q 011355          244 HC---GDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENR-SLVL-GMAGRLVKDKGHPLMFEALKQL  318 (488)
Q Consensus       244 ~~---~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~-~~~i-~~~Grl~~~Kg~~~ll~a~~~l  318 (488)
                      ..   ..++.-.+   ..+++++|.--++.++......-++-..++|..+++ +..+ ++=-++.--|+--.=+-+.++.
T Consensus       139 ~~~~~~~yl~~l~---r~Pv~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~a  215 (364)
T PF10933_consen  139 FENTCAPYLETLH---RCPVRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEA  215 (364)
T ss_pred             hhhhchHHHHHHh---cCCceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEEeecCccHHHHHHH
Confidence            32   34555444   456788887666554433221111112234443322 1222 2222333345532222233333


Q ss_pred             HhhccCCCCC-eEEE-EEeCCCch--hHHh----hh----CCcEEEeCccCHHHHHHHHH-hcCEEEeCCCCCCCCChHH
Q 011355          319 LAENDTFRRS-TVFL-VAGDGPWG--ARYR----DL----GTNVIVLGPLDQTRLAMFYN-AIDIFVNPTLRAQGLDHTV  385 (488)
Q Consensus       319 ~~~~~~~~~~-~~l~-ivG~g~~~--~~~~----~l----~~~V~~~g~v~~~~l~~~~~-~adv~v~ps~~~eg~~~~~  385 (488)
                      -...    |+ +..+ ++-.-..+  ..+.    .+    .....|.|..   ++..+++ ..|++|.-- |.-+.-..-
T Consensus       216 YR~~----P~~v~~~~V~Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~tD~VvSHq-WeN~lNYlY  287 (364)
T PF10933_consen  216 YRAD----PDAVEHVYVTNTYHLKEHPTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHTDAVVSHQ-WENPLNYLY  287 (364)
T ss_pred             HHhC----hhhcceEEEecchhhhcCHHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCCCEEEecc-ccchhhHHH
Confidence            3333    33 3333 33321111  1111    11    2567788865   3445554 578888644 555666788


Q ss_pred             HHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCH
Q 011355          386 LEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTA  456 (488)
Q Consensus       386 lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~  456 (488)
                      +||+.-|=|.|- |.+-     +.  +.|+..+. |..+=++++.+.+.+....++...+++++.+.. ++.
T Consensus       288 ~daLyggYPLVH-NS~~-----l~--d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~-~~p  350 (364)
T PF10933_consen  288 YDALYGGYPLVH-NSPL-----LK--DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDR-LSP  350 (364)
T ss_pred             HHHHhcCCCccc-Ccch-----hc--ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh-hCC
Confidence            999999999994 3322     32  38999998 999999999988887677788888888888755 454

>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.20  E-value=7.3  Score=35.31  Aligned_cols=105  Identities=17%  Similarity=0.265  Sum_probs=65.0

Q ss_pred             hhhhhhhCCCCCCcEEEEEEeeecccc-ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh-------------
Q 011355          280 KDFKKKFGIPENRSLVLGMAGRLVKDK-GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD-------------  345 (488)
Q Consensus       280 ~~~r~~~~i~~~~~~~i~~~Grl~~~K-g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~-------------  345 (488)
                      ..+++++|+++.....+   +-+..++ ..+-.|+-+++..       .++.|++.+. .....+.+             
T Consensus       165 ~~l~~rlgv~ek~~~~~---slFaY~npa~~s~ieq~r~a~-------~p~llL~~e~-~~~~~~~~~~~~~~~a~Gdv~  233 (370)
T COG4394         165 EYLLERLGVNEKYDLIA---SLFAYENPALPSWIEQLRKAD-------KPILLLIPEG-KTQANFAKYFDNNNNADGDVF  233 (370)
T ss_pred             HHHHHHcCCchhhchhh---hhhccCCcchHHHHHHHHhcC-------CCEEEEcccc-hHHHHHHHHcCCCcccccchh
Confidence            45677777765432222   2222333 4555666555543       3455555543 22222221             


Q ss_pred             --hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCC
Q 011355          346 --LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLA  401 (488)
Q Consensus       346 --l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~  401 (488)
                        -.-+|..++++++++..+++..||+-+.   ++|.   +.+-|..+|+|.+=.=.+
T Consensus       234 ~~~~lrvvklPFvpqddyd~LL~lcD~n~V---RGED---SFVRAq~agkPflWHIYp  285 (370)
T COG4394         234 QTAKLRVVKLPFVPQDDYDELLWLCDFNLV---RGED---SFVRAQLAGKPFLWHIYP  285 (370)
T ss_pred             cccceEEEEecCCcHhHHHHHHHhccccee---ecch---HHHHHHHcCCCcEEEecC
Confidence              1245778999999999999999999665   5565   778999999999865443

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2

Probab=89.92  E-value=5.9  Score=39.18  Aligned_cols=161  Identities=11%  Similarity=-0.010  Sum_probs=77.7

Q ss_pred             eEEEEEecCC-------CCCCCCCcHHHHHHHHHHHHHHC--------CC----eEEEEecCCCCCCCCC----------
Q 011355           77 LKIALFVKKW-------PHRSHAGGLERHALTLHLALAKR--------GH----ELHIFTASCLNCSFPT----------  127 (488)
Q Consensus        77 mkIl~i~~~~-------p~~~~~gG~~~~~~~l~~~L~~~--------G~----~V~v~~~~~~~~~~~~----------  127 (488)
                      -+|++++.+-       -..+..||--.|+.+++++|.+.        |.    +|.++|.--++.....          
T Consensus       273 f~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~g  352 (550)
T PF00862_consen  273 FNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEKVSG  352 (550)
T ss_dssp             SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEEETT
T ss_pred             EEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccccCC
Confidence            4889988631       11236789999999999999753        43    4888877543332211          


Q ss_pred             -CCCceEEEecCCCC-----c---cCcchhHHHH-----HHHHHHhcCCCCCcEEEeCCc-----chHHhhhccCCcEEE
Q 011355          128 -YPISSLYFHLSKPT-----A---AGYLDQSIVW-----QQLQTQNSTGKPFDVIHTESV-----GLRHTRARNLTNVVV  188 (488)
Q Consensus       128 -~~~~~i~~~~~~~~-----~---~~~~~~~~~~-----~~~~~~~~~~~~~Dvv~~~~~-----~~~~~~~~~~p~~v~  188 (488)
                       .....+++++....     +   ...|.+...+     ..+.....  ..||+||.|..     +.....+.++| ...
T Consensus       353 t~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~--~~PdlI~GnYsDgnlvA~LLs~~lgv~-~~~  429 (550)
T PF00862_consen  353 TENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQ--GKPDLIIGNYSDGNLVASLLSRKLGVT-QCF  429 (550)
T ss_dssp             ESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHT--S--SEEEEEHHHHHHHHHHHHHHHT-E-EEE
T ss_pred             CCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhC--CCCcEEEeccCcchHHHHHHHhhcCCc-eeh
Confidence             22223333333211     1   1223322221     11222222  28999999852     22222334567 788


Q ss_pred             eeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHH
Q 011355          189 SWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGD  247 (488)
Q Consensus       189 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~  247 (488)
                      +-|...-.-+.       ...-...-...-+....++..+...++.+|.||+-+.....
T Consensus       430 iaHsLek~Ky~-------~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~  481 (550)
T PF00862_consen  430 IAHSLEKTKYE-------DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIA  481 (550)
T ss_dssp             E-SS-HHHHHH-------TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHH
T ss_pred             hhhcccccccc-------ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhc
Confidence            88875322111       01111111244555666666667788999999997754433

4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=88.75  E-value=5.2  Score=32.51  Aligned_cols=94  Identities=18%  Similarity=0.198  Sum_probs=57.2

Q ss_pred             EEEEEEeeeccccChHHHHHH------HHHhHhhccCCCCCeEEE-EEeCCC-ch-hHHhh--hCCc--EEEeCccCHHH
Q 011355          294 LVLGMAGRLVKDKGHPLMFEA------LKQLLAENDTFRRSTVFL-VAGDGP-WG-ARYRD--LGTN--VIVLGPLDQTR  360 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~~~ll~a------~~~l~~~~~~~~~~~~l~-ivG~g~-~~-~~~~~--l~~~--V~~~g~v~~~~  360 (488)
                      -+++.+|.-.    .+.|+.+      ...|.+.+     -.+|+ =.|+|. .. +....  ....  |....+  ..+
T Consensus         5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G-----~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f--~ps   73 (170)
T KOG3349|consen    5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRG-----FTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDF--SPS   73 (170)
T ss_pred             EEEEEecccc----HHHHHHHHcCHHHHHHHHHcC-----ccEEEEEecCCccCCCCHHHhhcccCCeEEEEEec--Ccc
Confidence            4677888653    5666643      34455544     23443 467762 11 11111  1233  444455  458


Q ss_pred             HHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCc
Q 011355          361 LAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASI  403 (488)
Q Consensus       361 l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~  403 (488)
                      +.++++.||++|.   + .|- .+++|.+..|+|.|+.-....
T Consensus        74 l~e~I~~AdlVIs---H-AGa-GS~letL~l~KPlivVvNd~L  111 (170)
T KOG3349|consen   74 LTEDIRSADLVIS---H-AGA-GSCLETLRLGKPLIVVVNDSL  111 (170)
T ss_pred             HHHHHhhccEEEe---c-CCc-chHHHHHHcCCCEEEEeChHh
Confidence            9999999999996   2 343 389999999999998654443

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=88.57  E-value=1.9  Score=36.43  Aligned_cols=34  Identities=24%  Similarity=0.177  Sum_probs=25.0

Q ss_pred             CCCcHHHHHHHHHHHH--HHCCCeEEEEecCCCCCC
Q 011355           91 HAGGLERHALTLHLAL--AKRGHELHIFTASCLNCS  124 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L--~~~G~~V~v~~~~~~~~~  124 (488)
                      ..||....+..|.+.+  ....++..+++..+....
T Consensus         6 gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~   41 (170)
T PF08660_consen    6 GSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSR   41 (170)
T ss_pred             cCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccH
Confidence            4699999999999999  233677778877765443

>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=86.04  E-value=1.3  Score=35.94  Aligned_cols=36  Identities=31%  Similarity=0.334  Sum_probs=27.6

Q ss_pred             EEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 011355           79 IALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC  120 (488)
Q Consensus        79 Il~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  120 (488)
                      |++.+.      ..+|.-.-...++++|+++||||.+.+...
T Consensus         1 Ili~~~------Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~   36 (139)
T PF03033_consen    1 ILIATG------GTRGHVYPFLALARALRRRGHEVRLATPPD   36 (139)
T ss_dssp             EEEEEE------SSHHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred             CEEEEc------CChhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence            455554      456777778899999999999999888764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....

>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family

Probab=84.14  E-value=10  Score=36.05  Aligned_cols=104  Identities=20%  Similarity=0.256  Sum_probs=66.3

Q ss_pred             hhhhhhhCCC--CCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh------------
Q 011355          280 KDFKKKFGIP--ENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------------  345 (488)
Q Consensus       280 ~~~r~~~~i~--~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------------  345 (488)
                      ..+.+++|++  ++. .++..++  .+.-.+..++++++...       .+++++|-. |.....+..            
T Consensus       168 ~~~~~~lg~~~~~~~-~~vSLF~--Ye~~al~~ll~~~~~~~-------~pv~lLvp~-Gr~~~~v~~~l~~~~~~~g~~  236 (371)
T TIGR03837       168 RALLRRLGVGPEPDA-LLVSLFC--YENAALPALLDALAQSG-------SPVHLLVPE-GRALAAVAAWLGDALLAAGDV  236 (371)
T ss_pred             HHHHHHcCCCCCCCC-eEEEEEe--cCChhHHHHHHHHHhCC-------CCeEEEecC-CccHHHHHHHhCccccCCccc
Confidence            3456677875  333 3332222  23344777888776543       355555544 332222211            


Q ss_pred             --h-CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCC
Q 011355          346 --L-GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRL  400 (488)
Q Consensus       346 --l-~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~  400 (488)
                        . .-.|++++++++++...++-.||+-+.   ++|-   +++=|..+|+|.|=.=.
T Consensus       237 ~~~g~L~~~~LPf~~Q~~yD~LLW~cD~NfV---RGED---SFVRAqWAgkPfvWhIY  288 (371)
T TIGR03837       237 HRRGALTVAVLPFVPQDDYDRLLWACDLNFV---RGED---SFVRAQWAGKPFVWHIY  288 (371)
T ss_pred             cccCceEEEEcCCCChhhHHHHHHhChhcEe---echh---HHHHHHHcCCCceeecc
Confidence              0 135888999999999999999999554   6776   78999999999996543

This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.

>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]

Probab=83.81  E-value=19  Score=33.25  Aligned_cols=92  Identities=16%  Similarity=0.100  Sum_probs=54.0

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC------------CCCceEEEecCCCCc
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT------------YPISSLYFHLSKPTA  142 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~------------~~~~~i~~~~~~~~~  142 (488)
                      +.-.|.+...      ...|=++.+-.|.+.|.++||.|-|++.++..+...-            ...+++.+..... .
T Consensus        50 ~a~viGITG~------PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~s-r  122 (323)
T COG1703          50 NAHVIGITGV------PGAGKSTLIEALGRELRERGHRVAVLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPS-R  122 (323)
T ss_pred             CCcEEEecCC------CCCchHHHHHHHHHHHHHCCcEEEEEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCC-C
Confidence            3345555542      3467788899999999999999999999876554322            2234444433221 1


Q ss_pred             cCcchhHHHHHHHHHHhcCCCCCcEEEeCCcc
Q 011355          143 AGYLDQSIVWQQLQTQNSTGKPFDVIHTESVG  174 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~  174 (488)
                      ...-.....-.......... .||+|++.+.+
T Consensus       123 G~lGGlS~at~~~i~~ldAa-G~DvIIVETVG  153 (323)
T COG1703         123 GTLGGLSRATREAIKLLDAA-GYDVIIVETVG  153 (323)
T ss_pred             ccchhhhHHHHHHHHHHHhc-CCCEEEEEecC
Confidence            11122233333333333333 89999998754

>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]

Probab=82.78  E-value=13  Score=33.36  Aligned_cols=44  Identities=20%  Similarity=0.257  Sum_probs=29.3

Q ss_pred             CCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011355           74 LKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNC  123 (488)
Q Consensus        74 ~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~  123 (488)
                      +..++|++|..+ |.+-..|..     ..+..+.++|++|.+++.+.+..
T Consensus         8 ~~~~~vL~v~aH-PDDe~~g~g-----gtla~~~~~G~~V~v~~lT~Ge~   51 (237)
T COG2120           8 LDPLRVLVVFAH-PDDEEIGCG-----GTLAKLAARGVEVTVVCLTLGEA   51 (237)
T ss_pred             ccCCcEEEEecC-CcchhhccH-----HHHHHHHHCCCeEEEEEccCCcc
Confidence            356899999864 333233333     34455688999999999886543

>COG5017 Uncharacterized conserved protein [Function unknown]

Probab=82.76  E-value=12  Score=29.92  Aligned_cols=92  Identities=14%  Similarity=0.199  Sum_probs=57.3

Q ss_pred             EEEEEeeeccccChHHHHHH--HHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEE
Q 011355          295 VLGMAGRLVKDKGHPLMFEA--LKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFV  372 (488)
Q Consensus       295 ~i~~~Grl~~~Kg~~~ll~a--~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v  372 (488)
                      +++.+|.-  ..++..++.-  ...+.+..    .+--++=.|+|....    . ....+.|+--.+++..+...|.++|
T Consensus         2 ifVTvGst--f~~f~rlv~k~e~~el~~~i----~e~lIvQyGn~d~kp----v-agl~v~~F~~~~kiQsli~darIVI   70 (161)
T COG5017           2 IFVTVGST--FYPFNRLVLKIEVLELTELI----QEELIVQYGNGDIKP----V-AGLRVYGFDKEEKIQSLIHDARIVI   70 (161)
T ss_pred             eEEEecCc--cchHHHHHhhHHHHHHHHHh----hhheeeeecCCCccc----c-cccEEEeechHHHHHHHhhcceEEE
Confidence            46678865  3334333332  22233332    222344567765432    1 2367788877899999999999777


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEEeCCCC
Q 011355          373 NPTLRAQGLDHTVLEAMLSGKPLMATRLAS  402 (488)
Q Consensus       373 ~ps~~~eg~~~~~lEAma~G~PVI~~~~~~  402 (488)
                      .  +-++|   +++.++..++|.|......
T Consensus        71 S--HaG~G---SIL~~~rl~kplIv~pr~s   95 (161)
T COG5017          71 S--HAGEG---SILLLLRLDKPLIVVPRSS   95 (161)
T ss_pred             e--ccCcc---hHHHHhhcCCcEEEEECch
Confidence            4  32444   8899999999999875544

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=82.23  E-value=2.5  Score=31.87  Aligned_cols=62  Identities=18%  Similarity=0.186  Sum_probs=37.2

Q ss_pred             HhhhCCcEEEe---CccCHH--HHHHHHHhcCEEEeCCCC-CCC-CChHHHHHHHcCCcEEEeCCCCcc
Q 011355          343 YRDLGTNVIVL---GPLDQT--RLAMFYNAIDIFVNPTLR-AQG-LDHTVLEAMLSGKPLMATRLASIV  404 (488)
Q Consensus       343 ~~~l~~~V~~~---g~v~~~--~l~~~~~~adv~v~ps~~-~eg-~~~~~lEAma~G~PVI~~~~~~~~  404 (488)
                      +++.+-...+.   +.....  .+...+..+|++|++... +.+ .-.+--+|-..|+|++.++..+..
T Consensus        19 ~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~   87 (97)
T PF10087_consen   19 LEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVS   87 (97)
T ss_pred             HHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHH
Confidence            33344444444   333333  488999999998886642 111 122334566789999999866654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=82.01  E-value=2.5  Score=35.67  Aligned_cols=37  Identities=24%  Similarity=0.334  Sum_probs=27.9

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNC  123 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~  123 (488)
                      |||++|..       .|-+..   .++++..++||+|+.++.+....
T Consensus         1 mKIaiIgA-------sG~~Gs---~i~~EA~~RGHeVTAivRn~~K~   37 (211)
T COG2910           1 MKIAIIGA-------SGKAGS---RILKEALKRGHEVTAIVRNASKL   37 (211)
T ss_pred             CeEEEEec-------CchhHH---HHHHHHHhCCCeeEEEEeChHhc
Confidence            89999985       233333   57788889999999999876443

>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6

Probab=82.00  E-value=2.4  Score=33.26  Aligned_cols=41  Identities=22%  Similarity=0.317  Sum_probs=24.8

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC  120 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  120 (488)
                      |||+|+....-. ....+-  ....|+.+.+++||+|.++...+
T Consensus         1 Mki~fvmDpi~~-i~~~kD--TT~alm~eAq~RGhev~~~~~~d   41 (119)
T PF02951_consen    1 MKIAFVMDPIES-IKPYKD--TTFALMLEAQRRGHEVFYYEPGD   41 (119)
T ss_dssp             -EEEEEES-GGG---TTT---HHHHHHHHHHHTT-EEEEE-GGG
T ss_pred             CeEEEEeCCHHH-CCCCCC--hHHHHHHHHHHCCCEEEEEEcCc
Confidence            899999873211 122332  33468888899999999998875

3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.

>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family

Probab=81.01  E-value=2.5  Score=36.71  Aligned_cols=42  Identities=17%  Similarity=0.161  Sum_probs=30.1

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSF  125 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~  125 (488)
                      |||++..+.     ..  ...-+..|.++|++.||+|.|+++..+....
T Consensus         1 M~ILlTNDD-----Gi--~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~   42 (196)
T PF01975_consen    1 MRILLTNDD-----GI--DAPGIRALAKALSALGHDVVVVAPDSEQSGT   42 (196)
T ss_dssp             SEEEEE-SS------T--TSHHHHHHHHHHTTTSSEEEEEEESSSTTTS
T ss_pred             CeEEEEcCC-----CC--CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCc
Confidence            899999862     12  2335668999998778999999998765443

This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	488
2jjm_A	394	Crystal Structure Of A Family Gt4 Glycosyltransfera		2e-09
3mbo_A	414	Crystal Structure Of The Glycosyltransferase Babsha		3e-09
3c4q_A	426	Structure Of The Retaining Glycosyltransferase Msha		5e-06
3c48_A	438	Structure Of The Retaining Glycosyltransferase Msha		7e-06
3okc_A	394	Crystal Structure Of Corynebacterium Glutamicum Pim		2e-05
3oka_A	381	Crystal Structure Of Corynebacterium Glutamicum Pim		2e-05

>pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 165/416 (39%), Gaps = 50/416 (12%)
Query: 77  LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC---LNCSFPTYPISSL 133
           +K+ + +  +P     GG       L   LA+RGHE+H  T+     LN  +P     ++
Sbjct: 14  MKLKIGITCYPS---VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYP-----NI 65
Query: 134 YFH---LSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSW 190
           YFH   +++ +   Y    +       + +  +  D++H     + H     L   ++  
Sbjct: 66  YFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHVH-YAIPHAICAYLAKQMIGE 124
Query: 191 HGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLK 250
                 T+H   I  L   P            S VV  V      +H +    H  +++K
Sbjct: 125 RIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAV------SHSLINETH--ELVK 176
Query: 251 RIYMIPEERVHVILNGVDEEV-FKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHP 309
                P + +  + N +DE V FK D+      KK++GI E+  +++ ++    K K   
Sbjct: 177 -----PNKDIQTVYNFIDERVYFKRDMTQ---LKKEYGISESEKILIHISN-FRKVKRVQ 227
Query: 310 LMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTN------VIVLGPLDQTRLAM 363
            + +A  +++ E D        L+ GDGP       L  N      V+ LG  D     +
Sbjct: 228 DVVQAFAKIVTEVDA-----KLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELL 282
Query: 364 FYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFS-PQVE 422
             + + + ++     +     +LEAM  G P + TR+  I   VI   D GYL       
Sbjct: 283 AMSDLMLLLS---EKESFGLVLLEAMACGVPCIGTRVGGI-PEVIQHGDTGYLCEVGDTT 338
Query: 423 SVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGE 478
            V      +  D  E+    G  AR+     F + K+ + YE ++  +  D+KNG+
Sbjct: 339 GVADQAIQLLKD-EELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDDKNGK 393

>pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 165/416 (39%), Gaps = 50/416 (12%)
Query: 77  LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC---LNCSFPTYPISSL 133
           +K+ + +  +P     GG       L   LA+RGHE+H  T+     LN  +P     ++
Sbjct: 34  MKLKIGITCYPS---VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYP-----NI 85
Query: 134 YFH---LSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSW 190
           YFH   +++ +   Y    +       + +  +  D++H     + H     L   ++  
Sbjct: 86  YFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHVH-YAIPHAICAYLAKQMIGE 144
Query: 191 HGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLK 250
                 T+H   I  L   P            S VV  V      +H +    H  +++K
Sbjct: 145 RIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAV------SHSLINETH--ELVK 196
Query: 251 RIYMIPEERVHVILNGVDEEV-FKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHP 309
                P + +  + N +DE V FK D+      KK++GI E+  +++ ++    K K   
Sbjct: 197 -----PNKDIQTVYNFIDERVYFKRDMT---QLKKEYGISESEKILIHIS-NFRKVKRVQ 247
Query: 310 LMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTN------VIVLGPLDQTRLAM 363
            + +A  +++ E D        L+ GDGP       L  N      V+ LG  D     +
Sbjct: 248 DVVQAFAKIVTEVDA-----KLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELL 302
Query: 364 FYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFS-PQVE 422
             + + + ++     +     +LEAM  G P + TR+  I   VI   D GYL       
Sbjct: 303 AMSDLMLLLS---EKESFGLVLLEAMACGVPCIGTRVGGI-PEVIQHGDTGYLCEVGDTT 358
Query: 423 SVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNGE 478
            V      +  D  E+    G  AR+     F + K+ + YE ++  +  D+KNG+
Sbjct: 359 GVADQAIQLLKD-EELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDDKNGK 413

>pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 146/363 (40%), Gaps = 66/363 (18%)
Query: 85  KWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAG 144
           + P    +GG+  + L+    LAK+G E+ I+T +                  ++P+   
Sbjct: 14  QQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRA------------------TRPSQGE 55
Query: 145 YLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSW---HGIAYETIHSD 201
            +    V + L+  N    P++ +  E +    T+    T  ++S+     + Y+ IHS 
Sbjct: 56  IVR---VAENLRVINIAAGPYEGLSKEEL---PTQLAAFTGGMLSFTRREKVTYDLIHSH 109
Query: 202 ---------IIQELLRTPEEPQAYALA--------------ERASKVVEEVKFFPKYAHH 238
                    ++++L R P    A+ LA                A ++ E+          
Sbjct: 110 YWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLA 169
Query: 239 VATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP--DVAMGKDFKKKFGIPENRSLVL 296
           V T +   D++   Y    +R+ V+  G D E++ P  D A  +  +++ GIP + + V+
Sbjct: 170 VNTQEEMQDLMHH-YDADPDRISVVSPGADVELYSPGNDRATERS-RRELGIPLH-TKVV 226
Query: 297 GMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-DGPWGA--RYRDLGTNVIV- 352
              GRL   KG  ++ +A+  L  + D  R   V +  G  GP      YR +   + V 
Sbjct: 227 AFVGRLQPFKGPQVLIKAVAALF-DRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVE 285
Query: 353 -----LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSV 407
                L P   + L   Y A DI   P+   +      +EA  SG P++A R+  +  +V
Sbjct: 286 KRIRFLDPRPPSELVAVYRAADIVAVPSFN-ESFGLVAMEAQASGTPVIAARVGGLPIAV 344
Query: 408 IVG 410
             G
Sbjct: 345 AEG 347

>pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 146/363 (40%), Gaps = 66/363 (18%)
Query: 85  KWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAG 144
           + P    +GG+  + L+    LAK+G E+ I+T +                  ++P+   
Sbjct: 34  QQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRA------------------TRPSQGE 75
Query: 145 YLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSW---HGIAYETIHSD 201
            +    V + L+  N    P++ +  E +    T+    T  ++S+     + Y+ IHS 
Sbjct: 76  IVR---VAENLRVINIAAGPYEGLSKEEL---PTQLAAFTGGMLSFTRREKVTYDLIHSH 129
Query: 202 ---------IIQELLRTPEEPQAYALA--------------ERASKVVEEVKFFPKYAHH 238
                    ++++L R P    A+ LA                A ++ E+          
Sbjct: 130 YWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLA 189
Query: 239 VATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP--DVAMGKDFKKKFGIPENRSLVL 296
           V T +   D++   Y    +R+ V+  G D E++ P  D A  +  +++ GIP + + V+
Sbjct: 190 VNTQEEMQDLMHH-YDADPDRISVVSPGADVELYSPGNDRATERS-RRELGIPLH-TKVV 246
Query: 297 GMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-DGPWGA--RYRDLGTNVIV- 352
              GRL   KG  ++ +A+  L  + D  R   V +  G  GP      YR +   + V 
Sbjct: 247 AFVGRLQPFKGPQVLIKAVAALF-DRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVE 305
Query: 353 -----LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSV 407
                L P   + L   Y A DI   P+   +      +EA  SG P++A R+  +  +V
Sbjct: 306 KRIRFLDPRPPSELVAVYRAADIVAVPSFN-ESFGLVAMEAQASGTPVIAARVGGLPIAV 364
Query: 408 IVG 410
             G
Sbjct: 365 AEG 367

>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 265 NGVDEEVFKPDVAMGKD-FKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAEND 323
           +GVD + F P     K   +KK G  +  + V+    RLV  KG   + +A+ Q++A   
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGFTDT-TPVIACNSRLVPRKGQDSLIKAMPQVIAA-- 226
Query: 324 TFRRSTVFLVAGDGPWGARYRDLGT----NVIVLGPLDQTRLAMFYNAIDIFVNPT---- 375
             R     L+ G G + +  R L T    NV  LG L+   +     A DIF  P     
Sbjct: 227 --RPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRG 284
Query: 376 --LRAQGLDHTVLEAMLSGKPLMA-------TRLASIVGSVIVGTDMGYL 416
             L  +GL    LEA   G P++A         +    G V+ G+D+  L
Sbjct: 285 GGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPATGLVVEGSDVDKL 334

>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 265 NGVDEEVFKPDVAMGKD-FKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAEND 323
           +GVD + F P     K   +KK G  +  + V+    RLV  KG   + +A+ Q++A   
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGFTDT-TPVIACNSRLVPRKGQDSLIKAMPQVIAA-- 226
Query: 324 TFRRSTVFLVAGDGPWGARYRDLGT----NVIVLGPLDQTRLAMFYNAIDIFVNPT---- 375
             R     L+ G G + +  R L T    NV  LG L+   +     A DIF  P     
Sbjct: 227 --RPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRG 284
Query: 376 --LRAQGLDHTVLEAMLSGKPLMA-------TRLASIVGSVIVGTDMGYL 416
             L  +GL    LEA   G P++A         +    G V+ G+D+  L
Sbjct: 285 GGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPATGLVVEGSDVDKL 334

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	488
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	9e-44
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	3e-42
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	2e-40
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	7e-34
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	4e-33
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	4e-32
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	2e-24
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	9e-23
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	8e-21
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	7e-17
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	9e-17
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	3e-16
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	1e-15
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	5e-07
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	1e-06
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	2e-05
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	5e-05
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	8e-04

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score =  157 bits (400), Expect = 9e-44
 Identities = 89/423 (21%), Positives = 154/423 (36%), Gaps = 66/423 (15%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFH- 136
           K+ + +  +P     GG       L   LA+RGHE+H  T+             ++YFH 
Sbjct: 15  KLKIGITCYPS---VGGSGVVGTELGKQLAERGHEIHFITSG--LPFRLNKVYPNIYFHE 69

Query: 137 -----LSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHT---ESVGLRHTRARNLTN--- 185
                 S      Y D ++  +  +         D++H        +    A+ +     
Sbjct: 70  VTVNQYSVFQYPPY-DLALASKMAEVAQREN--LDILHVHYAIPHAICAYLAKQMIGERI 126

Query: 186 -VVVSWHGIAYETIHSD-IIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSD 243
            +V + HG     + SD  +  L+R           E++  V              A S 
Sbjct: 127 KIVTTLHGTDITVLGSDPSLNNLIRF--------GIEQSDVVT-------------AVSH 165

Query: 244 HCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV 303
              +    +   P + +  + N +DE V+          KK++GI E+   +L       
Sbjct: 166 SLINETHELV-KPNKDIQTVYNFIDERVYFKRDM--TQLKKEYGISESE-KILIHISNFR 221

Query: 304 KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLD 357
           K K    + +A  +++ E D        L+ GDGP             +   V+ LG  D
Sbjct: 222 KVKRVQDVVQAFAKIVTEVD-----AKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQD 276

Query: 358 QTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYL 416
              +A      D+ +  + + + GL   +LEAM  G P + TR+  I   +  G   GYL
Sbjct: 277 N--VAELLAMSDLMLLLSEKESFGL--VLLEAMACGVPCIGTRVGGIPEVIQHGDT-GYL 331

Query: 417 FSPQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEK 475
                   V      +  D  E+    G  AR+     F + K+ + YE ++  +  D+K
Sbjct: 332 CEVGDTTGVADQAIQLLKD-EELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDDK 390

Query: 476 NGE 478
           NG+
Sbjct: 391 NGK 393

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score =  153 bits (389), Expect = 3e-42
 Identities = 70/415 (16%), Positives = 122/415 (29%), Gaps = 67/415 (16%)

Query: 77  LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCS-------FPTYP 129
            K  +    +P     GG++ +              +   T +            +    
Sbjct: 5   RKTLVVTNDFP--PRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIR 62

Query: 130 ISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHT---ESVGLRHTRARNLTN- 185
                  L  PT A  + + I+ ++           D +       + L    A+     
Sbjct: 63  WPR-SVMLPTPTTAHAMAE-IIRER---------EIDNVWFGAAAPLALMAGTAKQAGAS 111

Query: 186 -VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDH 244
            V+ S HG           ++ LR         +      +                S +
Sbjct: 112 KVIASTHGHEVGWSMLPGSRQSLR--------KIGTEVDVLT-------------YISQY 150

Query: 245 CGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKD-FKKKFGIPENRSLVLGMAGRLV 303
                K  +         + +GVD + F P     K   +KK G  +   ++     RLV
Sbjct: 151 TLRRFKSAF-GSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIA-CNSRLV 208

Query: 304 KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYR----DLGTNVIVLGPLDQT 359
             KG   + +A+ Q++A     R     L+ G G + +  R    D+  NV  LG L+  
Sbjct: 209 PRKGQDSLIKAMPQVIAA----RPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQ 264

Query: 360 RLAMFYNAIDIFVNPTLRAQGLDH------TVLEAMLSGKPLMATRLASIVGSVIVGTDM 413
            +     A DIF  P     G           LEA   G P++A        +V   T  
Sbjct: 265 DMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPAT-- 322

Query: 414 GYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
           G +     V+ + + L  +  D        G   R      ++   M      + 
Sbjct: 323 GLVVEGSDVDKLSELLIELLDD-PIRRAAMGAAGRAHVEAEWSWEIMGERLTNIL 376

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score =  148 bits (375), Expect = 2e-40
 Identities = 64/408 (15%), Positives = 129/408 (31%), Gaps = 59/408 (14%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC---LNCSFPTY--PISS 132
            +A  + K+      GGL+R  + +   +A RGH + ++T S       +F     P+ S
Sbjct: 2   IVAFCLYKYFPF---GGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKS 58

Query: 133 LYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVS--W 190
              H        ++      ++         P D +          +   L     +   
Sbjct: 59  HTNHGRNAEYYAWVQN--HLKEH--------PADRVVG------FNKMPGLDVYFAADVC 102

Query: 191 HGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLK 250
           +          + +   R     + YA  ERA+    +          +  +D      +
Sbjct: 103 YAEKVAQEKGFLYRLTSRY----RHYAAFERATFEQGKS------TKLMMLTDKQIADFQ 152

Query: 251 RIYMIPEERVHVILNGVDEEVFKPDV--AMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH 308
           + Y    ER  ++  G+  +    +      + +++K GI E +  +L   G     KG 
Sbjct: 153 KHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-NLLLQVGSDFGRKGV 211

Query: 309 PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL------GTNVIVLGPLDQTRLA 362
               EAL  L        R    L         ++  L       +NV       +  ++
Sbjct: 212 DRSIEALASLPES----LRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSG--RNDVS 265

Query: 363 MFYNAIDIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-- 419
               A D+ ++P  + A G+   +LEA+ +G P++ T +       I   + G + +   
Sbjct: 266 ELMAAADLLLHPAYQEAAGI--VLLEAITAGLPVLTTAVCGY-AHYIADANCGTVIAEPF 322

Query: 420 QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
             E + + L         +       AR           +      + 
Sbjct: 323 SQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDLYSLPEKAADII 368

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score =  131 bits (332), Expect = 7e-34
 Identities = 84/442 (19%), Positives = 159/442 (35%), Gaps = 63/442 (14%)

Query: 64  NHLSFPSNPPLKLLKIALFVK-----KWPHRSHAGGLERHALTLHLALAKRGHELHIFTA 118
           +H S    P    +++A+        + P    +GG+  + L+    LAK+G E+ I+T 
Sbjct: 8   HHHSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTR 67

Query: 119 SCLNCSFPTYPIS-SLYFHLSKPTAAGYLDQSIVWQQLQT--------QNSTGKPFDVIH 169
           +          ++ +L            L +  +  QL                 +D+IH
Sbjct: 68  ATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIH 127

Query: 170 -----TESVGLRHTRARNLTNV--VVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA 222
                +  VG      R+L  +  + + H +    + +    +      E +A  + E+ 
Sbjct: 128 SHYWLSGQVGWL---LRDLWRIPLIHTAHTL--AAVKNSYRDDSDTP--ESEARRICEQ- 179

Query: 223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKD- 281
            ++V+              +      L   Y    +R+ V+  G D E++ P      + 
Sbjct: 180 -QLVDNA------DVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATER 232

Query: 282 FKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG- 340
            +++ GIP +  +V    GRL   KG  ++ +A+  L           + ++   GP G 
Sbjct: 233 SRRELGIPLHTKVVA-FVGRLQPFKGPQVLIKAVAALFDR---DPDRNLRVIICGGPSGP 288

Query: 341 ----------ARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAM 389
                     A    +   +  L P   + L   Y A DI   P+   + GL    +EA 
Sbjct: 289 NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGL--VAMEAQ 346

Query: 390 LSGKPLMATRLASIVGSVIVGTDMGYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARK 448
            SG P++A R+  +  +V  G   G L       +   AL  +  D  E   + G  A +
Sbjct: 347 ASGTPVIAARVGGLPIAVAEGET-GLLVDGHSPHAWADALATLLDD-DETRIRMGEDAVE 404

Query: 449 RGLNLFT----ATKMAAAYERL 466
                F+    A ++++ Y   
Sbjct: 405 H-ARTFSWAATAAQLSSLYNDA 425

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score =  129 bits (325), Expect = 4e-33
 Identities = 59/419 (14%), Positives = 120/419 (28%), Gaps = 68/419 (16%)

Query: 73  PLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISS 132
            LK       V         GG+     +L   L   G E   F        F       
Sbjct: 37  KLKGRSFV-HVNSTSF---GGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFH 92

Query: 133 LYFHLSKPT--AAGYLDQSIVWQQLQTQNSTGKPFDVIHTES---VGLRHTRARNLTNVV 187
                ++         +  +   +  ++      FD +         L     +    + 
Sbjct: 93  NALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLW 152

Query: 188 VSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGD 247
                      H D+      +    + +    R         F  KY  ++    H  +
Sbjct: 153 ---------RCHIDL------SSPNREFWEFLRR---------FVEKYDRYIF---HLPE 185

Query: 248 VLKRIYMIPEERVHVILNGVDEEVFKP---DVAMGKDFKKKFGIPENRSLVLGMAGRLVK 304
            ++    +   +  ++   +D    K             ++F +   + ++     R   
Sbjct: 186 YVQP--ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIIT-QVSRFDP 242

Query: 305 DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG---------------ARYRDLGTN 349
            KG   + E  +++  +          L+ G                        D+   
Sbjct: 243 WKGIFDVIEIYRKVKEKIP----GVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVL 298

Query: 350 VIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVI 408
             ++G   +  +  F  A D+ +  ++R   GL  TV EAM  GKP++   +  I   ++
Sbjct: 299 TNLIGVHARE-VNAFQRASDVILQMSIREGFGL--TVTEAMWKGKPVIGRAVGGIKFQIV 355

Query: 409 VGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
            G   G+L         + +  +     EV ++ G  A++R    F  TK    Y  + 
Sbjct: 356 DGET-GFLVRD-ANEAVEVVLYLLKH-PEVSKEMGAKAKERVRKNFIITKHMERYLDIL 411

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score =  126 bits (318), Expect = 4e-32
 Identities = 83/424 (19%), Positives = 139/424 (32%), Gaps = 71/424 (16%)

Query: 63  WNHLSFPSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLN 122
            +H S    P    ++I +           GG++ H L L   L   GHE+ +   +  +
Sbjct: 7   HHHHSSGLVPRGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64

Query: 123 CSFPTYPISSL------YFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIH-----TE 171
              P Y +S        Y         G      V + +   +     FDV+H       
Sbjct: 65  VKLPDYVVSGGKAVPIPYNGSVARLRFGPATHRKVKKWIAEGD-----FDVLHIHEPNAP 119

Query: 172 SVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF 231
           S+ +   +A     V          T H+   + L          ++ +   +   E   
Sbjct: 120 SLSMLALQAAEGPIVA---------TFHTSTTKSL--------TLSVFQGILRPYHE--- 159

Query: 232 FPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPEN 291
             K    +A SD      +            I NGVD   F              G P  
Sbjct: 160 --KIIGRIAVSDL---ARRWQMEALGSDAVEIPNGVDVASFADAPL-------LDGYPRE 207

Query: 292 RSLVLGMAGRLVKD-KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG---ARYRDLG 347
              VL   GR  +  KG  ++  AL +L+A           L+ G G       +  DL 
Sbjct: 208 GRTVL-FLGRYDEPRKGMAVLLAALPKLVAR----FPDVEILIVGRGDEDELREQAGDLA 262

Query: 348 TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA--QGLDHTVLEAMLSGKPLMATRLASIVG 405
            ++  LG +D    A    + D++  P L     G+   ++EAM +G  ++A+ L +   
Sbjct: 263 GHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGI--VLVEAMAAGTAVVASDLDAFRR 320

Query: 406 SVIVGTDMGYLFSPQ-VESVKKALYGIWAD--GREVLEKKGLVARKRGLNLFTATKMAAA 462
            +  G   G L      + +  AL GI  D   R     +      R    +  + ++A 
Sbjct: 321 VLADGDA-GRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHR----YDWSVVSAQ 375

Query: 463 YERL 466
             R+
Sbjct: 376 IMRV 379

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score =  105 bits (263), Expect = 2e-24
 Identities = 71/440 (16%), Positives = 129/440 (29%), Gaps = 73/440 (16%)

Query: 90  SHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPT-------- 141
              GG   +   + LALA+ G ++ I T    + ++P +     Y+  +           
Sbjct: 30  PDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFG 89

Query: 142 AAGYLDQSIVWQQLQT--------QNSTGKPFDVIHTE--SVGLRHTRARNLTNV--VVS 189
              +L +  +W  L              GK   V+ T     GL     +N+  +    +
Sbjct: 90  GDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFT 149

Query: 190 WHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHV-ATSDH---- 244
            H  +      + +       +E        R             YA  +  ++      
Sbjct: 150 GH--SLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTM---SYADKIIVSTSQERFG 204

Query: 245 ---CGDVLKRIYMIPEERVHVILNGVDEEVFKP------DVAMGKDFKKKFGIPENRSLV 295
                     + +  +++  VI  GV+  VF           + K  ++  G        
Sbjct: 205 QYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPA 264

Query: 296 LGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--------------- 340
           +  + RL + K H  + EA  Q     D      + L   + P+                
Sbjct: 265 IIASSRLDQKKNHYGLVEAYVQNKELQDK-ANLVLTLRGIENPFEDYSRAGQEEKEILGK 323

Query: 341 ----ARYRDLGTNVIVLGPLDQTRLAMFYNAI----DIFVNPTL-RAQGLDHTVLEAMLS 391
                   D    V +     Q  LA  Y  +     +F   +     GL    +EAM S
Sbjct: 324 IIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGL--APVEAMAS 381

Query: 392 GKPLMATRLASIVGSVIVGTDMGYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARKRG 450
           G P + TR       +  G   G L  P+  E + + L   +    E         ++R 
Sbjct: 382 GLPAVVTRNGGPAEILDGGKY-GVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRV 439

Query: 451 LNLFT----ATKMAAAYERL 466
              +T    A       + +
Sbjct: 440 EERYTWQETARGYLEVIQEI 459

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score = 98.3 bits (245), Expect = 9e-23
 Identities = 59/409 (14%), Positives = 108/409 (26%), Gaps = 100/409 (24%)

Query: 72  PPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPIS 131
            PL++     ++   P     GG++     L   L + GHE+ +  A       P   + 
Sbjct: 11  IPLRVPGSDAWISVPPQ--GYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPGLTVV 68

Query: 132 SLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWH 191
                      AG  ++  + + L+T +      DV+H  S G+            +S  
Sbjct: 69  P----------AGEPEE--IERWLRTAD-----VDVVHDHSGGVIGPAGLPPGTAFIS-- 109

Query: 192 GIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKR 251
                + H          P  P     + RA                            R
Sbjct: 110 -----SHHFTT------RPVNPVGCTYSSRAQ---------------------------R 131

Query: 252 IYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM 311
            +    +   VI   VD   ++                  +   L   GR+   KG    
Sbjct: 132 AHCGGGDDAPVIPIPVDPARYRSA-----------ADQVAKEDFLLFMGRVSPHKGALEA 180

Query: 312 FEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD----LGTNVIVLGPLDQTRLAMFYNA 367
                               ++AG       + +     G+ V  +G +   R      +
Sbjct: 181 AAFAHACGRR---------LVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLAS 231

Query: 368 IDIFVNPTLRAQGLDHT---------VLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFS 418
               +  +    G             V EA +SG P++ T    +   V     +G +  
Sbjct: 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIV---PSVGEVVG 288

Query: 419 PQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
              +          A      E      R+  + L+    +A  Y   +
Sbjct: 289 YGTDFAPDEARRTLAGLPASDE-----VRRAAVRLWGHVTIAERYVEQY 332

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score = 93.3 bits (231), Expect = 8e-21
 Identities = 47/402 (11%), Positives = 104/402 (25%), Gaps = 30/402 (7%)

Query: 69  PSNPPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTY 128
                +K  ++ L V         GG+   AL L      +  +  I        +    
Sbjct: 39  ARTSSIKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATP-NPKDL 96

Query: 129 PISSLYFHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVV 188
                + ++       +  Q + +     +       D+    +    +   R ++    
Sbjct: 97  QSFKSFKYVMPEEDKDFALQIVPFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSD 156

Query: 189 SWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDV 248
           ++     + ++     E        Q Y LAE   K       +      V  S+     
Sbjct: 157 TYGIPPNKILYIIQDFEPGFYQWSSQ-YVLAESTYK-------YRGPQIAVFNSELLKQY 208

Query: 249 LKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH 308
                       +     ++  +                  +   ++L      VK    
Sbjct: 209 FNNKG-YNFTDEYFFQPKINTTLKNY----------INDKRQKEKIILVYGRPSVKRNAF 257

Query: 309 PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAI 368
            L+ EALK    +          +  G+          G ++  LG L     A      
Sbjct: 258 TLIVEALKIF-VQKYDRSNEWKIISVGEKHKDIAL-GKGIHLNSLGKLTLEDYADLLKRS 315

Query: 369 DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQ-VESVKKA 427
            I ++  + +    +  LE    G  ++  +  +    +               E++ + 
Sbjct: 316 SIGISLMI-SPHPSYPPLEMAHFGLRVITNKYENK--DLSNWHSNIVSLEQLNPENIAET 372

Query: 428 LYGIWAD--GREVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
           L  +      R+V +K+        +N F         E   
Sbjct: 373 LVELCMSFNNRDVDKKESSNMMFY-INEFNEFSFIKEIEEKL 413

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score = 77.2 bits (191), Expect = 7e-17
 Identities = 37/183 (20%), Positives = 59/183 (32%), Gaps = 35/183 (19%)

Query: 261 HVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLA 320
           H   + V+   FK                 +  L +    R+  +K   L  E  K+L  
Sbjct: 6   HHHSHPVETSKFKFK------------CYGDFWLSVN---RIYPEKRIELQLEVFKKL-- 48

Query: 321 ENDTFRRSTVFLVAGDGPWGARYRDL--------GTNVIVLGPLDQTRLAMFYNAIDIFV 372
                 +     + G    G                NV  LG + +  L   Y+     +
Sbjct: 49  ------QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLL 102

Query: 373 NPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGI 431
                   GL  T +EAM SGKP++A        +VI     GYL +  V  +  A+  +
Sbjct: 103 CTAKDEDFGL--TPIEAMASGKPVIAVNEGGFKETVINEKT-GYLVNADVNEIIDAMKKV 159

Query: 432 WAD 434
             +
Sbjct: 160 SKN 162

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score = 82.3 bits (203), Expect = 9e-17
 Identities = 72/519 (13%), Positives = 127/519 (24%), Gaps = 118/519 (22%)

Query: 55  DLLWFPSAWNHLSFPSNPPLKLLKIALF-------VKKWPHRSHAGGLERHALTLHLALA 107
           DLL  P      +F    P+    + +                  GG   + L    AL 
Sbjct: 258 DLLEAPDPCTLETFLGRVPMVF-NVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALE 316

Query: 108 KR------------GHELHIFTASCLNCSFPTYP-------------ISSLYFHLSKPTA 142
                            + I T    +    T               I  + F   K   
Sbjct: 317 IEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIV 376

Query: 143 AGYLDQSIVWQQLQT---------QNSTGKPFDVIHTE-----SVGLRHTRARNLTNVVV 188
             ++ +  VW  L+T                 D+I         V         +T    
Sbjct: 377 RKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT-QCT 435

Query: 189 SWHGIA---------YETIHSDIIQELLRTPEEPQAYALAER--ASKVVEEVKFFPKYAH 237
             H +          Y     D      +   +  A    +    S   E          
Sbjct: 436 IAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQ 495

Query: 238 HVATSDHCGDVLKRI---YMIPEERVHVILNGVDEEVFKPDVAMGKDFKK---------- 284
           + + +      L R+     + + + +++  G D  ++ P     +   K          
Sbjct: 496 YESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLY 555

Query: 285 ---------KFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG 335
                         + + ++  M  RL + K    + E       +N   R     +V G
Sbjct: 556 SDVENKEHLCVLKDKKKPILFTM-ARLDRVKNLSGLVEW----YGKNTRLRELANLVVVG 610

Query: 336 DGPWG-----------------ARYRDLGTNVIVLGP-LDQTR----LAMFYNAIDIFVN 373
                                      L      +   +D+ R         +    FV 
Sbjct: 611 GDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQ 670

Query: 374 PTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQ-----VESVKKA 427
           P L  A GL  TV+EAM  G P  AT        ++ G   G+   P       +++   
Sbjct: 671 PALYEAFGL--TVVEAMTCGLPTFATCKGGPAEIIVHGKS-GFHIDPYHGDQAADTLADF 727

Query: 428 LYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERL 466
                 D     ++      +R    +T    +     L
Sbjct: 728 FTKCKED-PSHWDEISKGGLQRIEEKYTWQIYSQRLLTL 765

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score = 75.3 bits (186), Expect = 3e-16
 Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 21/176 (11%)

Query: 294 LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL------G 347
             + M GR   +K   ++ +A+     + D      V L+ G GP   + + L       
Sbjct: 3   FKIAMVGRYSNEKNQSVLIKAVALSKYKQD-----IVLLLKGKGPDEKKIKLLAQKLGVK 57

Query: 348 TNVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSGKPLMATRLASIVGS 406
                +   +   L        ++V+     ++ +    LEA+  G   +    + +  +
Sbjct: 58  AEFGFVNSNE---LLEILKTCTLYVHAANVESEAI--ACLEAISVGIVPVIAN-SPLSAT 111

Query: 407 VIVGTDMGYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAA 461
                D   LF P   + +   +     + +   E+      K  LN +T      
Sbjct: 112 RQFALDERSLFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKSALN-YTLENSVI 165

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score = 77.5 bits (190), Expect = 1e-15
 Identities = 54/433 (12%), Positives = 119/433 (27%), Gaps = 72/433 (16%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHL 137
           K+ + V          G  R    +   ++K  HE+ +F    ++    +   +   F  
Sbjct: 2   KL-IIVGAHSSVP--SGYGRVMRAIVPRISK-AHEVIVFG---IHAFGRSVHANIEEFDA 54

Query: 138 SKPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYET 197
                   L++   +    ++       D++        +        V+ ++     + 
Sbjct: 55  QTAEHVRGLNEQGFYYSGLSEFIDVHKPDIVMI------YNDPI----VIGNYLLAMGKC 104

Query: 198 IHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPE 257
            H   I   +    +     L          +   PK    +A S      +       +
Sbjct: 105 SHRTKIVLYVDLVSKNIRENL--------WWIFSHPKVVGVMAMSKCWISDICNYG--CK 154

Query: 258 ERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQ 317
             ++++ + VD +            K       N  ++     R    K   +   A  +
Sbjct: 155 VPINIVSHFVDTKTIYDA------RKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAAR 208

Query: 318 LLAENDTFRRSTVFLVAGDGPWG---------------ARYRDLGTNVIVLGPLDQTRLA 362
            +++    +   +     +  +                  +  L   +I    L   R+ 
Sbjct: 209 FISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVD 268

Query: 363 MFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSV--IVGTDMGYLFSPQ 420
           M YNA D+ VN +   +G      E  + GKPL+ +     VG        D  Y   P 
Sbjct: 269 MMYNACDVIVNCS-SGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGDCVYKIKPS 323

Query: 421 VESV---KKALYGIWADG--------------REVLEKKGLVARKRGLNLFTATKMAAAY 463
                  +  + GI                   +  ++ G   +       T   +++  
Sbjct: 324 AWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDI 383

Query: 464 ERLFLCISNDEKN 476
              F  +   E  
Sbjct: 384 IDFFNSLLRVESR 396

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.5 bits (130), Expect = 7e-08
 Identities = 43/233 (18%), Positives = 80/233 (34%), Gaps = 47/233 (20%)

Query: 50  QDKFIDLLWFPSA-----------WNHLSFPSNPPL---KLLKIALFVKKWPHRSHAGGL 95
           +  F  L  FP +           W  +   S+  +   KL K +L V+K P  S    +
Sbjct: 372 RKMFDRLSVFPPSAHIPTILLSLIWFDVI-KSDVMVVVNKLHKYSL-VEKQPKEST---I 426

Query: 96  ERHALTLHLALAKRG-HELHIFTASCLNCSFPTYPISSLYF--HLSKPTAAGYLDQSIVW 152
              ++ L L +     + LH    S ++     Y I   +    L  P    Y    I  
Sbjct: 427 SIPSIYLELKVKLENEYALH---RSIVDH----YNIPKTFDSDDLIPPYLDQYFYSHIGH 479

Query: 153 QQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLR---- 208
             L+      +   +     +  R    + + +   +W+         + +Q+L      
Sbjct: 480 H-LKNIEHPER-MTLFRMVFLDFRFLEQK-IRHDSTAWNASGSIL---NTLQQLKFYKPY 533

Query: 209 -TPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERV 260
               +P+ Y   ER   V   + F PK   ++  S +  D+L+   M  +E +
Sbjct: 534 ICDNDPK-Y---ER--LVNAILDFLPKIEENLICSKYT-DLLRIALMAEDEAI 579

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200

 Score = 49.1 bits (118), Expect = 5e-07
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 9/81 (11%)

Query: 263 ILNGVDEEVFKP-DVAMGK-----DFKKKFGIPENRSLVLGMAGRLVKD-KGHPLMFEAL 315
             NG+D   +    +   +         KFG+ E         GR  +  KG  ++ +A+
Sbjct: 2   SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGV--TFMFIGRFDRGQKGVDVLLKAI 59

Query: 316 KQLLAENDTFRRSTVFLVAGD 336
           + L ++ +      + +  GD
Sbjct: 60  EILSSKKEFQEMRFIIIGKGD 80

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Length = 406

 Score = 49.7 bits (118), Expect = 1e-06
 Identities = 24/152 (15%), Positives = 41/152 (26%), Gaps = 28/152 (18%)

Query: 258 ERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQ 317
           + V  + +GVD  + +               P    +     G ++ D       E    
Sbjct: 197 DNVFHVGHGVDHNLDQLGDP----------SPYAEGIHAVAVGSMLFD------PEFFVV 240

Query: 318 LLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR 377
                        F V G G    R+   G NVIV G +   +   +       + P   
Sbjct: 241 ASKA----FPQVTFHVIGSGM--GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYAS 294

Query: 378 AQGLDHT------VLEAMLSGKPLMATRLASI 403
            Q   +       +L+    G P +       
Sbjct: 295 EQVPVYLADSSMKLLQYDFFGLPAVCPNAVVG 326

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 26/111 (23%)

Query: 233 PKYAHHVATSDH-CG--DVLKRIYMIPEERVHVILNGVDEEVFKP-------------DV 276
           P YA  + T++   G   V+          +H I+NG+D +V+ P             ++
Sbjct: 215 PSYAEEILTAEFGMGLEGVIGSR----AHVLHGIVNGIDADVWNPATDHLIHDNYSAANL 270

Query: 277 AMGK-----DFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAEN 322
              +        + F I ++ S +  +  RL   KG  LM EA+ ++++  
Sbjct: 271 K-NRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLG 320

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485

 Score = 44.5 bits (106), Expect = 5e-05
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 25/112 (22%)

Query: 233 PKYAHHVATSDH-CG--DVLKRIYMIPEERVHVILNGVDEEVFKP-------------DV 276
           P YA  +       G   +L++ +   E R+  +LNGVDE+++ P              +
Sbjct: 213 PTYAREITEPQFAYGMEGLLQQRHR--EGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL 270

Query: 277 AMGK-----DFKKKFGIPENRSL-VLGMAGRLVKDKGHPLMFEALKQLLAEN 322
              K       +   G+  +  + +  +  RL   KG  L+ EAL  LL + 
Sbjct: 271 E-DKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQG 321

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439

 Score = 40.6 bits (96), Expect = 8e-04
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 11/82 (13%)

Query: 263 ILNGVDEEVFKP--DVAMGK-----DFKKKFGIPENRSLVLGMAGRLVKD-KGHPLMFEA 314
           + NG+D   +         +         KFG+ E         GR  +  KG  ++ +A
Sbjct: 217 VFNGIDCSFWNESYLTG-SRDERKKSLLSKFGMDEGV--TFMFIGRFDRGQKGVDVLLKA 273

Query: 315 LKQLLAENDTFRRSTVFLVAGD 336
           ++ L ++ +      + +  GD
Sbjct: 274 IEILSSKKEFQEMRFIIIGKGD 295

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	488
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	100.0
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	100.0
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	100.0
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	100.0
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	100.0
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	100.0
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.97
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.97
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.97
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.96
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.96
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.95
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.95
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.93
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.92
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.92
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.92
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.91
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.87
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.87
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.86
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.85
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.83
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.82
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.81
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.79
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.77
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.72
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.7
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.66
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.58
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.55
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.54
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.43
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	99.39
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.36
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	98.96
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	98.9
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	98.9
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	98.82
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	98.78
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	98.66
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	98.63
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	98.62
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	98.62
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	98.58
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	98.54
3tov_A	349	Glycosyl transferase family 9; structural genomics	98.16
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	97.83
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	97.68
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	95.7
1xv5_A	401	AGT, DNA alpha-glucosyltransferase; HET: DNA CME U	93.75
3ty2_A	261	5'-nucleotidase SURE; surviVal protein, phosphatas	86.65
2d1p_A	140	TUSD, hypothetical UPF0163 protein YHEN; tRNA modi	85.71
2ixd_A	242	LMBE-related protein; hexamer, deacetylase, rossma	85.34
4gi5_A	280	Quinone reductase; protein structure initiative, F	83.48
2hy5_A	130	Putative sulfurtransferase DSRE; DSRE, DSRF, sulfu	80.36

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=1.4e-46  Score=368.45  Aligned_cols=362  Identities=17%  Similarity=0.209  Sum_probs=286.6

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCC----CCCCCCceEEEecCCCCccCcchhHH
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCS----FPTYPISSLYFHLSKPTAAGYLDQSI  150 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (488)
                      ++|||++++..|||  ..||+++++.+++++|  +||+|+|++.......    ........+.+....     ......
T Consensus         3 ~~mkIl~v~~~~~p--~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~   73 (394)
T 3okp_A            3 ASRKTLVVTNDFPP--RIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSV-----MLPTPT   73 (394)
T ss_dssp             -CCCEEEEESCCTT--SCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSS-----CCSCHH
T ss_pred             CCceEEEEeCccCC--ccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccc-----cccchh
Confidence            57999999998887  6899999999999999  6999999998765321    011233333332221     122223


Q ss_pred             HHHHHHHHhcCCCCCcEEEeCCcchH-----HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHH
Q 011355          151 VWQQLQTQNSTGKPFDVIHTESVGLR-----HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKV  225 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~Dvv~~~~~~~~-----~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      ....+....++. +||+||++.....     .....+.|+++.+.|+.....            ..    ........+ 
T Consensus        74 ~~~~l~~~~~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------~~----~~~~~~~~~-  135 (394)
T 3okp_A           74 TAHAMAEIIRER-EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------------SM----LPGSRQSLR-  135 (394)
T ss_dssp             HHHHHHHHHHHT-TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH------------TT----SHHHHHHHH-
T ss_pred             hHHHHHHHHHhc-CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh------------hh----cchhhHHHH-
Confidence            333444444333 8999999864321     122235565888999853211            00    111111111 


Q ss_pred             HHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCC-CcccchhhhhhhCCCCCCcEEEEEEeeecc
Q 011355          226 VEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP-DVAMGKDFKKKFGIPENRSLVLGMAGRLVK  304 (488)
Q Consensus       226 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~-~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~  304 (488)
                          ..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+ ....+..++++++++++. ++++++|++.+
T Consensus       136 ----~~~~~~d~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~  209 (394)
T 3okp_A          136 ----KIGTEVDVLTYISQYTLRRFKSAFGS-HPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTT-PVIACNSRLVP  209 (394)
T ss_dssp             ----HHHHHCSEEEESCHHHHHHHHHHHCS-SSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTC-CEEEEESCSCG
T ss_pred             ----HHHHhCCEEEEcCHHHHHHHHHhcCC-CCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCc-eEEEEEecccc
Confidence                34578999999999999999997764 579999999999998877 555667899999998876 78999999999


Q ss_pred             ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh----CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCC--
Q 011355          305 DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL----GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA--  378 (488)
Q Consensus       305 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~--  378 (488)
                      .||++.+++|+..+.+++    ++++|+|+|+|+..+.++++    .++|+|+|+++++++.++|+.||++|+||...  
T Consensus       210 ~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~  285 (394)
T 3okp_A          210 RKGQDSLIKAMPQVIAAR----PDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGG  285 (394)
T ss_dssp             GGCHHHHHHHHHHHHHHS----TTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGG
T ss_pred             ccCHHHHHHHHHHHHhhC----CCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccc
Confidence            999999999999999988    89999999999988777764    48999999999999999999999999999732  


Q ss_pred             ----CCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhh
Q 011355          379 ----QGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNL  453 (488)
Q Consensus       379 ----eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~  453 (488)
                          ||+|++++|||++|+|||+++.++.. |++.++ +|+++++ |+++++++|.+++++ ++.++++++++++.+.++
T Consensus       286 ~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~  362 (394)
T 3okp_A          286 GLDVEGLGIVYLEAQACGVPVIAGTSGGAP-ETVTPA-TGLVVEGSDVDKLSELLIELLDD-PIRRAAMGAAGRAHVEAE  362 (394)
T ss_dssp             GTBCCSSCHHHHHHHHTTCCEEECSSTTGG-GGCCTT-TEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCcHHHHHHHcCCCEEEeCCCChH-HHHhcC-CceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHh
Confidence                99999999999999999999999998 888888 9999999 999999999999998 999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhhccccC
Q 011355          454 FTATKMAAAYERLFLCISNDEKN  476 (488)
Q Consensus       454 fs~~~~~~~~~~~~~~~~~~~~~  476 (488)
                      |+|+.+++++.++|+++..+.+.
T Consensus       363 ~s~~~~~~~~~~~~~~~~r~~~~  385 (394)
T 3okp_A          363 WSWEIMGERLTNILQSEPRKLAA  385 (394)
T ss_dssp             TBHHHHHHHHHHHHHSCCC----
T ss_pred             CCHHHHHHHHHHHHHHhccCcch
Confidence            99999999999999998875543

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=1.7e-45  Score=366.00  Aligned_cols=382  Identities=18%  Similarity=0.230  Sum_probs=280.6

Q ss_pred             CCceEEEEEecCCCCCC-----CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC----CCCceEEEecCCCCc--
Q 011355           74 LKLLKIALFVKKWPHRS-----HAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT----YPISSLYFHLSKPTA--  142 (488)
Q Consensus        74 ~~~mkIl~i~~~~p~~~-----~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~----~~~~~i~~~~~~~~~--  142 (488)
                      .+.|||++++..|+|..     ..||+++++.+++++|.++||+|+|++..........    .+...+.+.......  
T Consensus        18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~   97 (438)
T 3c48_A           18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLS   97 (438)
T ss_dssp             -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCC
T ss_pred             cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccccc
Confidence            36699999998876632     4699999999999999999999999998753221110    222222222211100  


Q ss_pred             -cCcchhH-HHHHHHHHH-hcCCCCCcEEEeCCcch--H---HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChh
Q 011355          143 -AGYLDQS-IVWQQLQTQ-NSTGKPFDVIHTESVGL--R---HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQ  214 (488)
Q Consensus       143 -~~~~~~~-~~~~~~~~~-~~~~~~~Dvv~~~~~~~--~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  214 (488)
                       ....... .....+... .+...+||+||+|....  .   .....++| ++++.|+........ .     .... ..
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~-~-----~~~~-~~  169 (438)
T 3c48_A           98 KEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIP-LIHTAHTLAAVKNSY-R-----DDSD-TP  169 (438)
T ss_dssp             GGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCC-EEEECSSCHHHHSCC----------C-CH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCC-EEEEecCCccccccc-c-----cccC-Cc
Confidence             0111111 111222222 22221599999986321  1   11223567 999999964321100 0     0000 00


Q ss_pred             HHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcc-cchhhhhhhCCCCCCc
Q 011355          215 AYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVA-MGKDFKKKFGIPENRS  293 (488)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~-~~~~~r~~~~i~~~~~  293 (488)
                      .......     .+...++.+|.++++|+..++.+.+.+|++..++.+||||+|.+.+.+... ....+|+++++++++ 
T Consensus       170 ~~~~~~~-----~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~~~~-  243 (438)
T 3c48_A          170 ESEARRI-----CEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHT-  243 (438)
T ss_dssp             HHHHHHH-----HHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCCSSS-
T ss_pred             chHHHHH-----HHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCCCCCC-
Confidence            0111111     122456789999999999999999888998899999999999988765432 234488999998777 


Q ss_pred             EEEEEEeeeccccChHHHHHHHHHhHhhccCCCC--CeEEEEEeC----CCchhHHhh------hCCcEEEeCccCHHHH
Q 011355          294 LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRR--STVFLVAGD----GPWGARYRD------LGTNVIVLGPLDQTRL  361 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~--~~~l~ivG~----g~~~~~~~~------l~~~V~~~g~v~~~~l  361 (488)
                      ++++++|++.+.||++.+++|+..+.++.    |  +++|+|+|+    |+..+.+++      +.++|.|+|+++++++
T Consensus       244 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~----p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~  319 (438)
T 3c48_A          244 KVVAFVGRLQPFKGPQVLIKAVAALFDRD----PDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSEL  319 (438)
T ss_dssp             EEEEEESCBSGGGCHHHHHHHHHHHHHHC----TTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHH
T ss_pred             cEEEEEeeecccCCHHHHHHHHHHHHhhC----CCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHH
Confidence            88999999999999999999999999887    5  899999998    666555543      3478999999999999


Q ss_pred             HHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHH
Q 011355          362 AMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLE  440 (488)
Q Consensus       362 ~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~  440 (488)
                      .++|+.||++|+||. .||||++++|||+||+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+.
T Consensus       320 ~~~~~~adv~v~ps~-~e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~  396 (438)
T 3c48_A          320 VAVYRAADIVAVPSF-NESFGLVAMEAQASGTPVIAARVGGLP-IAVAEGETGLLVDGHSPHAWADALATLLDD-DETRI  396 (438)
T ss_dssp             HHHHHHCSEEEECCS-CCSSCHHHHHHHHTTCCEEEESCTTHH-HHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHH
T ss_pred             HHHHHhCCEEEECcc-ccCCchHHHHHHHcCCCEEecCCCChh-HHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHH
Confidence            999999999999997 599999999999999999999999998 89999999999998 999999999999998 99999


Q ss_pred             HHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhccccCC
Q 011355          441 KKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKNG  477 (488)
Q Consensus       441 ~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~~  477 (488)
                      +|++++++.+.+ |+|+.+++++.++|+++++.++.+
T Consensus       397 ~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~  432 (438)
T 3c48_A          397 RMGEDAVEHART-FSWAATAAQLSSLYNDAIANENVD  432 (438)
T ss_dssp             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcccC
Confidence            999999999988 999999999999999998865433

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=3.7e-46  Score=370.77  Aligned_cols=380  Identities=18%  Similarity=0.176  Sum_probs=282.6

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC--------------------CCCCceEE
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFP--------------------TYPISSLY  134 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~i~  134 (488)
                      ++|||++++..|+| ...||.++++.+|+++|+++||+|+|+++........                    ..+.....
T Consensus         1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~   79 (439)
T 3fro_A            1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYR   79 (439)
T ss_dssp             CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred             CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEE
Confidence            57999999988877 5789999999999999999999999999776443221                    12222222


Q ss_pred             Eec---CCCCccC------cch---hHHHHHHHHHHh-cCCCCCcEEEeCCcchH---Hh--hhccCCcEEEeeeCCcch
Q 011355          135 FHL---SKPTAAG------YLD---QSIVWQQLQTQN-STGKPFDVIHTESVGLR---HT--RARNLTNVVVSWHGIAYE  196 (488)
Q Consensus       135 ~~~---~~~~~~~------~~~---~~~~~~~~~~~~-~~~~~~Dvv~~~~~~~~---~~--~~~~~p~~v~~~h~~~~~  196 (488)
                      +..   .......      ...   +......+.... .+..+||+||+|+....   .+  ...++| ++++.|+....
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~  158 (439)
T 3fro_A           80 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-AVFTIHRLNKS  158 (439)
T ss_dssp             EESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCC-EEEEESCCCCC
T ss_pred             ecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCC-EEEEecccccc
Confidence            221   0000001      000   111111222222 11238999999974321   11  224667 99999998654


Q ss_pred             hhhhhhhHhhhcC-CCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCC
Q 011355          197 TIHSDIIQELLRT-PEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPD  275 (488)
Q Consensus       197 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~  275 (488)
                      ............. ....         .....+...++.+|.++++|+..++.....++.+..++.+||||+|.+.|.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~  229 (439)
T 3fro_A          159 KLPAFYFHEAGLSELAPY---------PDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNES  229 (439)
T ss_dssp             CEEHHHHHHTTCGGGCCS---------SEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGG
T ss_pred             cCchHHhCcccccccccc---------ceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcc
Confidence            3222221110000 0000         00001114456799999999999998766667888999999999999988765


Q ss_pred             ------cccchhhhhhhCCCCCCcEEEEEEeeec-cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--hHHhh-
Q 011355          276 ------VAMGKDFKKKFGIPENRSLVLGMAGRLV-KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--ARYRD-  345 (488)
Q Consensus       276 ------~~~~~~~r~~~~i~~~~~~~i~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--~~~~~-  345 (488)
                            ...+..++++++++++  ++++++|++. +.||++.+++|++.+.++...  ++++|+|+|+|+..  +.+++ 
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g~~~~~~~l~~~  305 (439)
T 3fro_A          230 YLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKGDPELEGWARSL  305 (439)
T ss_dssp             GSCSCHHHHHHHHHHHHTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGG--GGEEEEEECCCCHHHHHHHHHH
T ss_pred             cccchhhhhHHHHHHHcCCCCC--cEEEEEcccccccccHHHHHHHHHHHHhcccC--CCeEEEEEcCCChhHHHHHHHH
Confidence                  2245778999998665  7899999999 999999999999999875311  48999999999865  55554 


Q ss_pred             ---hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CH
Q 011355          346 ---LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QV  421 (488)
Q Consensus       346 ---l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~  421 (488)
                         +++.+.+.|+++.+++.++|+.||++|+||.. ||||++++|||+||+|||+++.++.. |++.++ +|+++++ |+
T Consensus       306 ~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~-e~~~~~~~EAma~G~Pvi~s~~~~~~-e~~~~~-~g~~~~~~d~  382 (439)
T 3fro_A          306 EEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DIITNE-TGILVKAGDP  382 (439)
T ss_dssp             HHHCTTEEEECSCCCHHHHHHHHTTCSEEEECBSC-CSSCHHHHHHHHTTCEEEEESSTHHH-HHCCTT-TCEEECTTCH
T ss_pred             HhhcCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCC-CCccHHHHHHHHCCCCeEEcCCCCcc-eeEEcC-ceEEeCCCCH
Confidence               44677889999999999999999999999975 99999999999999999999999998 888776 9999999 99


Q ss_pred             HHHHHHHHHHHh-cCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhccc
Q 011355          422 ESVKKALYGIWA-DGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDE  474 (488)
Q Consensus       422 ~~la~~i~~ll~-~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~  474 (488)
                      ++++++|.++++ + ++.++++++++++.+ ++|||+.+++++.++|+++++++
T Consensus       383 ~~la~~i~~ll~~~-~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~  434 (439)
T 3fro_A          383 GELANAILKALELS-RSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRA  434 (439)
T ss_dssp             HHHHHHHHHHHHHT-TTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCB
T ss_pred             HHHHHHHHHHHhcC-HHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhh
Confidence            999999999999 7 899999999999999 56999999999999999998743

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=1.6e-45  Score=372.15  Aligned_cols=388  Identities=16%  Similarity=0.144  Sum_probs=281.5

Q ss_pred             CceEEEEEecCCCCC---------CCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCC-CC----------CCCCceEE
Q 011355           75 KLLKIALFVKKWPHR---------SHAGGLERHALTLHLALAKRGHELHIFTASCLNCS-FP----------TYPISSLY  134 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~---------~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~----------~~~~~~i~  134 (488)
                      ++|||++++..|+|.         ...||+++++.+++++|.++||+|+|++....... ..          ..++..+.
T Consensus         6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~   85 (499)
T 2r60_A            6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVR   85 (499)
T ss_dssp             -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEE
T ss_pred             ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEE
Confidence            359999999877663         25799999999999999999999999998653221 00          11222222


Q ss_pred             EecCCCCc---cCcchhH-HHHHHHHHHhcCC-CCCcEEEeCCcchH-----HhhhccCCcEEEeeeCCcchhhhhhhhH
Q 011355          135 FHLSKPTA---AGYLDQS-IVWQQLQTQNSTG-KPFDVIHTESVGLR-----HTRARNLTNVVVSWHGIAYETIHSDIIQ  204 (488)
Q Consensus       135 ~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~-~~~Dvv~~~~~~~~-----~~~~~~~p~~v~~~h~~~~~~~~~~~~~  204 (488)
                      +.......   ...+... .....+....++. .+||+||+|.....     .....++| ++++.|+........    
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p-~v~~~H~~~~~~~~~----  160 (499)
T 2r60_A           86 IPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLP-FTFTGHSLGAQKMEK----  160 (499)
T ss_dssp             ECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCC-EEEECSSCHHHHHHT----
T ss_pred             ecCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCc-EEEEccCcccccchh----
Confidence            22211100   0112211 1112222222221 17999999974211     11223668 999999974432111    


Q ss_pred             hhhcCC-CChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH--hc-C----CCCcEEEecCCccCCCcCCCc
Q 011355          205 ELLRTP-EEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI--YM-I----PEERVHVILNGVDEEVFKPDV  276 (488)
Q Consensus       205 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~--~g-~----~~~~i~vi~ngvd~~~~~~~~  276 (488)
                       ..... ..+..............+...++.+|.++++|+..++.+.+.  +| +    +..++.|||||+|.+.+.+..
T Consensus       161 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~  239 (499)
T 2r60_A          161 -LNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEY  239 (499)
T ss_dssp             -TCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCC
T ss_pred             -hccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccc
Confidence             00000 000001111111111112255688999999999999999887  77 6    778999999999998886643


Q ss_pred             c--cchhhhhhhC-----CCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCC-eEEEEEeC--CC------c-
Q 011355          277 A--MGKDFKKKFG-----IPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRS-TVFLVAGD--GP------W-  339 (488)
Q Consensus       277 ~--~~~~~r~~~~-----i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~-~~l~ivG~--g~------~-  339 (488)
                      .  .+..+|+++|     +++++ ++|+++||+.+.||++.+++|+..+.++.    ++ ++++|+|+  |+      . 
T Consensus       240 ~~~~~~~~r~~~~~~~~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~~----~~~~~l~i~G~~~~~~~~y~~l~  314 (499)
T 2r60_A          240 GDKIKAKITKYLERDLGSERMEL-PAIIASSRLDQKKNHYGLVEAYVQNKELQ----DKANLVLTLRGIENPFEDYSRAG  314 (499)
T ss_dssp             CHHHHHHHHHHHHHHSCGGGTTS-CEEEECSCCCGGGCHHHHHHHHHTCHHHH----HHCEEEEEESSCSBTTTBCTTSC
T ss_pred             hhhhHHHHHHHhcccccccCCCC-cEEEEeecCccccCHHHHHHHHHHHHHhC----CCceEEEEECCCCCccccccccc
Confidence            2  2356888888     77666 78899999999999999999999998765    44 68999998  43      1 


Q ss_pred             ------hhHHhh------hCCcEEEeCccCHHHHHHHHHhc----CEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCc
Q 011355          340 ------GARYRD------LGTNVIVLGPLDQTRLAMFYNAI----DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASI  403 (488)
Q Consensus       340 ------~~~~~~------l~~~V~~~g~v~~~~l~~~~~~a----dv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~  403 (488)
                            .+.+++      +.++|+|+|+++++++.++|+.|    |++|+||. .||||++++|||+||+|||+++.++.
T Consensus       315 ~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~-~Eg~~~~~lEAma~G~PvI~s~~~g~  393 (499)
T 2r60_A          315 QEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSF-YEPFGLAPVEAMASGLPAVVTRNGGP  393 (499)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCS-CBCCCSHHHHHHHTTCCEEEESSBHH
T ss_pred             ccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcc-cCCCCcHHHHHHHcCCCEEEecCCCH
Confidence                  333433      34789999999999999999999    99999997 49999999999999999999999998


Q ss_pred             ccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhccccC
Q 011355          404 VGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEKN  476 (488)
Q Consensus       404 ~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~  476 (488)
                      . |++.++.+|+++++ |+++++++|.+++++ ++.+++|++++++.+.++|||+.+++++.++|+++++.+..
T Consensus       394 ~-e~v~~~~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~  465 (499)
T 2r60_A          394 A-EILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE  465 (499)
T ss_dssp             H-HHTGGGTSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC---
T ss_pred             H-HHhcCCceEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhh
Confidence            8 89999999999998 999999999999998 99999999999999999999999999999999999876543

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=5.9e-45  Score=366.79  Aligned_cols=383  Identities=16%  Similarity=0.174  Sum_probs=270.2

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC--CC-------------------CCCceEEE
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSF--PT-------------------YPISSLYF  135 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~~-------------------~~~~~i~~  135 (488)
                      |||++++..|+|....||+++++.+|+++|+++||+|+|++........  ..                   ....++.+
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v   80 (485)
T 1rzu_A            1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL   80 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred             CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence            8999999888774457999999999999999999999999976432100  00                   00122222


Q ss_pred             ecCC-------CC-ccCc-------c---hhHHHHHHHHHHhc---CCCCCcEEEeCCcc---hHHhhh----ccCCcEE
Q 011355          136 HLSK-------PT-AAGY-------L---DQSIVWQQLQTQNS---TGKPFDVIHTESVG---LRHTRA----RNLTNVV  187 (488)
Q Consensus       136 ~~~~-------~~-~~~~-------~---~~~~~~~~~~~~~~---~~~~~Dvv~~~~~~---~~~~~~----~~~p~~v  187 (488)
                      ....       +. ..+.       .   .+......+....+   +..+||+||+|+..   +..+.+    .++| ++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~p-~v  159 (485)
T 1rzu_A           81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIP-SL  159 (485)
T ss_dssp             EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCC-EE
T ss_pred             EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcccCCCC-EE
Confidence            2110       00 0000       0   11111111222221   12389999999632   222222    4567 99


Q ss_pred             EeeeCCcchhhhh-hhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH-hc--------CCC
Q 011355          188 VSWHGIAYETIHS-DIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI-YM--------IPE  257 (488)
Q Consensus       188 ~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~g--------~~~  257 (488)
                      ++.|+..+..... ..... ...+...+.............+...++.+|.++++|+..++.+.+. +|        ++.
T Consensus       160 ~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~  238 (485)
T 1rzu_A          160 LTIHNIAFQGQFGANIFSK-LALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRA  238 (485)
T ss_dssp             EEESCTTCCCEECGGGGGG-SCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTG
T ss_pred             EEecCccccCCCCHHHHhh-cCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhc
Confidence            9999975432111 00000 0000000000000000000001134567999999999999998774 45        467


Q ss_pred             CcEEEecCCccCCCcCCCcc-----------------cchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHh
Q 011355          258 ERVHVILNGVDEEVFKPDVA-----------------MGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLA  320 (488)
Q Consensus       258 ~~i~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~  320 (488)
                      .++.+||||+|.+.|.+...                 .+..+++++|+++++.++++++||+.+.||++.+++|+..+.+
T Consensus       239 ~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~  318 (485)
T 1rzu_A          239 HVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS  318 (485)
T ss_dssp             GGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH
T ss_pred             CCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh
Confidence            89999999999988866532                 2467899999987633689999999999999999999999976


Q ss_pred             hccCCCCCeEEEEEeCCCc--hhHHhh----hCCcEE-EeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC
Q 011355          321 ENDTFRRSTVFLVAGDGPW--GARYRD----LGTNVI-VLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK  393 (488)
Q Consensus       321 ~~~~~~~~~~l~ivG~g~~--~~~~~~----l~~~V~-~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~  393 (488)
                            ++++|+|+|+|+.  .+.+++    ++++|+ +.|+ +.+++..+|+.||++|+||. .||||++++|||+||+
T Consensus       319 ------~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~-~E~~~~~~lEAma~G~  390 (485)
T 1rzu_A          319 ------LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGCDAIIIPSR-FEPCGLTQLYALRYGC  390 (485)
T ss_dssp             ------TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHCSEEEECCS-CCSSCSHHHHHHHHTC
T ss_pred             ------cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcCCEEEECcc-cCCCCHHHHHHHHCCC
Confidence                  5799999999863  444443    457897 7888 77788999999999999998 5999999999999999


Q ss_pred             cEEEeCCCCcccceeecC---------CceeEeCC-CHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHhhhCCHHHHH
Q 011355          394 PLMATRLASIVGSVIVGT---------DMGYLFSP-QVESVKKALYGIW---ADGREVLEKKGLVARKRGLNLFTATKMA  460 (488)
Q Consensus       394 PVI~~~~~~~~~e~v~~~---------~~g~l~~~-d~~~la~~i~~ll---~~~~~~~~~~~~~a~~~~~~~fs~~~~~  460 (488)
                      |||+++.||+. |++.++         .+|+++++ |+++++++|.+++   ++ ++.+++|++++++   ++|||+.++
T Consensus       391 PvI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~~  465 (485)
T 1rzu_A          391 IPVVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWTQMQKLGMK---SDVSWEKSA  465 (485)
T ss_dssp             EEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHT---CCCBHHHHH
T ss_pred             CEEEeCCCChh-heecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHH---HhCChHHHH
Confidence            99999999998 899888         89999999 9999999999999   67 8999999999874   679999999


Q ss_pred             HHHHHHHHHhhccc
Q 011355          461 AAYERLFLCISNDE  474 (488)
Q Consensus       461 ~~~~~~~~~~~~~~  474 (488)
                      ++|.++|++++++.
T Consensus       466 ~~~~~~y~~~~~~~  479 (485)
T 1rzu_A          466 GLYAALYSQLISKG  479 (485)
T ss_dssp             HHHHHHHHHHTC--
T ss_pred             HHHHHHHHHhhCCC
Confidence            99999999998865

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=1.3e-43  Score=357.11  Aligned_cols=382  Identities=16%  Similarity=0.164  Sum_probs=267.8

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCC--CC---------------C---CCCceEEEe
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCS--FP---------------T---YPISSLYFH  136 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~---------------~---~~~~~i~~~  136 (488)
                      |||++++..|+|....||+++++.+|+++|+++||+|+|++.......  ..               .   ....++.+.
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~   80 (485)
T 2qzs_A            1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY   80 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred             CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence            899999988876546799999999999999999999999997642210  00               0   001222222


Q ss_pred             cC-------CCC-ccCc-------c---hhHHHHHHHHHHhcC---CCCCcEEEeCCcc---hHHhh---hccCCcEEEe
Q 011355          137 LS-------KPT-AAGY-------L---DQSIVWQQLQTQNST---GKPFDVIHTESVG---LRHTR---ARNLTNVVVS  189 (488)
Q Consensus       137 ~~-------~~~-~~~~-------~---~~~~~~~~~~~~~~~---~~~~Dvv~~~~~~---~~~~~---~~~~p~~v~~  189 (488)
                      ..       ... ....       .   .+......+....+.   ..+||+||+|+..   +..+.   ..++| ++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~p-~v~t  159 (485)
T 2qzs_A           81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAK-SVFT  159 (485)
T ss_dssp             EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSSE-EEEE
T ss_pred             EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCCC-EEEE
Confidence            11       110 0000       0   111112223333332   1389999999742   22222   23567 9999


Q ss_pred             eeCCcchhhhh-hhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH-hcCC--------C--
Q 011355          190 WHGIAYETIHS-DIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI-YMIP--------E--  257 (488)
Q Consensus       190 ~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~g~~--------~--  257 (488)
                      .|+........ ..... ...+...+.............+...++.+|.++++|+..++.+.+. +|.+        .  
T Consensus       160 ~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (485)
T 2qzs_A          160 VHNLAYQGMFYAHHMND-IQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHRE  238 (485)
T ss_dssp             ESCTTCCCEEEGGGGGT-TTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHT
T ss_pred             ecCccccCCCCHHHHHh-cCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccC
Confidence            99975432111 00000 0000000000000000000001134567999999999999998774 5542        2  


Q ss_pred             CcEEEecCCccCCCcCCCcc-----------------cchhhhhhhCCCC--CCcEEEEEEeeeccccChHHHHHHHHHh
Q 011355          258 ERVHVILNGVDEEVFKPDVA-----------------MGKDFKKKFGIPE--NRSLVLGMAGRLVKDKGHPLMFEALKQL  318 (488)
Q Consensus       258 ~~i~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~--~~~~~i~~~Grl~~~Kg~~~ll~a~~~l  318 (488)
                      .++.+||||+|.+.|.+...                 .+..+++++++++  +. ++++++||+.+.||++.+++|++.+
T Consensus       239 ~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l  317 (485)
T 2qzs_A          239 GRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKV-PLFAVVSRLTSQKGLDLVLEALPGL  317 (485)
T ss_dssp             TCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTS-CEEEEEEEESGGGCHHHHHHHHHHH
T ss_pred             CceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCC-eEEEEeccCccccCHHHHHHHHHHH
Confidence            78999999999988866532                 2467899999986  44 7899999999999999999999999


Q ss_pred             HhhccCCCCCeEEEEEeCCC--chhHHhh----hCCcEE-EeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHc
Q 011355          319 LAENDTFRRSTVFLVAGDGP--WGARYRD----LGTNVI-VLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLS  391 (488)
Q Consensus       319 ~~~~~~~~~~~~l~ivG~g~--~~~~~~~----l~~~V~-~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~  391 (488)
                      .+      ++++|+|+|+|+  ..+.+++    ++++|. +.|+ +.+++..+|+.||++|+||. .||||++++|||+|
T Consensus       318 ~~------~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~-~E~~g~~~lEAma~  389 (485)
T 2qzs_A          318 LE------QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIMGGADVILVPSR-FEPCGLTQLYGLKY  389 (485)
T ss_dssp             HH------TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHHHHCSEEEECCS-CCSSCSHHHHHHHH
T ss_pred             hh------CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHHHhCCEEEECCc-cCCCcHHHHHHHHC
Confidence            76      579999999986  3444443    447886 8888 77888999999999999997 59999999999999


Q ss_pred             CCcEEEeCCCCcccceeecC---------CceeEeCC-CHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHhhhCCHHH
Q 011355          392 GKPLMATRLASIVGSVIVGT---------DMGYLFSP-QVESVKKALYGIW---ADGREVLEKKGLVARKRGLNLFTATK  458 (488)
Q Consensus       392 G~PVI~~~~~~~~~e~v~~~---------~~g~l~~~-d~~~la~~i~~ll---~~~~~~~~~~~~~a~~~~~~~fs~~~  458 (488)
                      |+|||+++.||.. |++.++         .+|+++++ |+++++++|.+++   ++ ++.+++|++++++   ++|||+.
T Consensus       390 G~PvI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~  464 (485)
T 2qzs_A          390 GTLPLVRRTGGLA-DTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSR-PSLWRFVQRQAMA---MDFSWQV  464 (485)
T ss_dssp             TCEEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTS-HHHHHHHHHHHHH---CCCCHHH
T ss_pred             CCCEEECCCCCcc-ceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHh---hcCCHHH
Confidence            9999999999998 899888         89999999 9999999999999   67 8999999999874   6799999


Q ss_pred             HHHHHHHHHHHhhccc
Q 011355          459 MAAAYERLFLCISNDE  474 (488)
Q Consensus       459 ~~~~~~~~~~~~~~~~  474 (488)
                      ++++|.++|+++..+.
T Consensus       465 ~~~~~~~ly~~~~~~~  480 (485)
T 2qzs_A          465 AAKSYRELYYRLKLEH  480 (485)
T ss_dssp             HHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHhhhhh
Confidence            9999999999987644

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=1.6e-42  Score=341.10  Aligned_cols=356  Identities=21%  Similarity=0.296  Sum_probs=267.1

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC---CCceEEEecCCCCccCcchhHHH
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTY---PISSLYFHLSKPTAAGYLDQSIV  151 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~  151 (488)
                      ++|||++++..+|+  ..||.++++..++++|.+.||+|++++...........   ....+.+..........+. ...
T Consensus        19 ~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   95 (406)
T 2gek_A           19 SHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFG-PAT   95 (406)
T ss_dssp             --CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CC-HHH
T ss_pred             CcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCccccccc-HHH
Confidence            57999999976654  67999999999999999999999999987654311110   0111111111100000011 111


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCcch---HH--hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHH
Q 011355          152 WQQLQTQNSTGKPFDVIHTESVGL---RH--TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVV  226 (488)
Q Consensus       152 ~~~~~~~~~~~~~~Dvv~~~~~~~---~~--~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      +..+....+.. +||+||++....   ..  ....+.| ++.+.|+.....                   .......+..
T Consensus        96 ~~~l~~~l~~~-~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~-------------------~~~~~~~~~~  154 (406)
T 2gek_A           96 HRKVKKWIAEG-DFDVLHIHEPNAPSLSMLALQAAEGP-IVATFHTSTTKS-------------------LTLSVFQGIL  154 (406)
T ss_dssp             HHHHHHHHHHH-CCSEEEEECCCSSSHHHHHHHHEESS-EEEEECCCCCSH-------------------HHHHHHHSTT
T ss_pred             HHHHHHHHHhc-CCCEEEECCccchHHHHHHHHhcCCC-EEEEEcCcchhh-------------------hhHHHHHHHH
Confidence            12222222222 899999986432   11  1223567 999999853221                   1111122222


Q ss_pred             HHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee-ccc
Q 011355          227 EEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL-VKD  305 (488)
Q Consensus       227 ~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl-~~~  305 (488)
                      .  ..++.+|.++++|+..++.+.+.++  ..++ ++|||+|.+.+.+....       .++++++ ++++++|++ .+.
T Consensus       155 ~--~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~-vi~~~v~~~~~~~~~~~-------~~~~~~~-~~i~~~G~~~~~~  221 (406)
T 2gek_A          155 R--PYHEKIIGRIAVSDLARRWQMEALG--SDAV-EIPNGVDVASFADAPLL-------DGYPREG-RTVLFLGRYDEPR  221 (406)
T ss_dssp             H--HHHTTCSEEEESSHHHHHHHHHHHS--SCEE-ECCCCBCHHHHHTCCCC-------TTCSCSS-CEEEEESCTTSGG
T ss_pred             H--HHHhhCCEEEECCHHHHHHHHHhcC--CCcE-EecCCCChhhcCCCchh-------hhccCCC-eEEEEEeeeCccc
Confidence            2  4578999999999999999988665  4578 99999998766543321       1223344 689999999 999


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh----CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCC
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL----GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGL  381 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~  381 (488)
                      ||++.+++|+..+.++.    ++++|+|+|+|+. +.++++    .++|+|+|+++++++.++|+.||++|+||.+.||+
T Consensus       222 Kg~~~li~a~~~l~~~~----~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~  296 (406)
T 2gek_A          222 KGMAVLLAALPKLVARF----PDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESF  296 (406)
T ss_dssp             GCHHHHHHHHHHHHTTS----TTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSS
T ss_pred             cCHHHHHHHHHHHHHHC----CCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCC
Confidence            99999999999999888    8999999999987 665553    57899999999999999999999999999646999


Q ss_pred             ChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHH
Q 011355          382 DHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMA  460 (488)
Q Consensus       382 ~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~  460 (488)
                      |++++|||+||+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++.+. +|+|+.++
T Consensus       297 ~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~-~~s~~~~~  373 (406)
T 2gek_A          297 GIVLVEAMAAGTAVVASDLDAFR-RVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVH-RYDWSVVS  373 (406)
T ss_dssp             CHHHHHHHHHTCEEEECCCHHHH-HHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGG-GGBHHHHH
T ss_pred             chHHHHHHHcCCCEEEecCCcHH-HHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH-hCCHHHHH
Confidence            99999999999999999999988 89999999999998 999999999999998 9999999999999998 79999999


Q ss_pred             HHHHHHHHHhhcccc
Q 011355          461 AAYERLFLCISNDEK  475 (488)
Q Consensus       461 ~~~~~~~~~~~~~~~  475 (488)
                      +++.++|++++++..
T Consensus       374 ~~~~~~~~~~~~~~~  388 (406)
T 2gek_A          374 AQIMRVYETVSGAGI  388 (406)
T ss_dssp             HHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHHHhhcc
Confidence            999999999987553

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=8e-43  Score=341.74  Aligned_cols=361  Identities=23%  Similarity=0.317  Sum_probs=265.0

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCC----cc-CcchhH
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPT----AA-GYLDQS  149 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~----~~-~~~~~~  149 (488)
                      ..||.-+....||.   .||+++++.+++++|+++||+|++++........  ...+++.+......    .. ..+.. 
T Consensus        12 ~~~~~~~~~~~~p~---~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~-   85 (394)
T 2jjm_A           12 HHMKLKIGITCYPS---VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN--KVYPNIYFHEVTVNQYSVFQYPPYDL-   85 (394)
T ss_dssp             ---CCEEEEECCC-----CHHHHHHHHHHHHHHHTTCEEEEECSSCC------CCCTTEEEECCCCC----CCSCCHHH-
T ss_pred             hhheeeeehhcCCC---CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc--ccCCceEEEecccccccccccccccH-
Confidence            34666666666654   7999999999999999999999999986432211  11223333221110    00 11111 


Q ss_pred             HHHHHHHHHhcCCCCCcEEEeCCcc---hHHhhhc-----cCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHH
Q 011355          150 IVWQQLQTQNSTGKPFDVIHTESVG---LRHTRAR-----NLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAER  221 (488)
Q Consensus       150 ~~~~~~~~~~~~~~~~Dvv~~~~~~---~~~~~~~-----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      .....+....++. +||+||+|+..   +..++..     ++| ++.+.|+......         .  .......+.  
T Consensus        86 ~~~~~l~~~l~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~---------~--~~~~~~~~~--  150 (394)
T 2jjm_A           86 ALASKMAEVAQRE-NLDILHVHYAIPHAICAYLAKQMIGERIK-IVTTLHGTDITVL---------G--SDPSLNNLI--  150 (394)
T ss_dssp             HHHHHHHHHHHHH-TCSEEEECSSTTHHHHHHHHHHHTTTCSE-EEEECCHHHHHTT---------T--TCTTTHHHH--
T ss_pred             HHHHHHHHHHHHc-CCCEEEEcchhHHHHHHHHHHHhhcCCCC-EEEEEecCccccc---------C--CCHHHHHHH--
Confidence            1222222222222 89999998632   1222221     367 9999998432110         0  011111111  


Q ss_pred             HHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEee
Q 011355          222 ASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR  301 (488)
Q Consensus       222 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  301 (488)
                        +     ..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+..  ...+++++++++++ ++++++|+
T Consensus       151 --~-----~~~~~ad~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~--~~~~~~~~~~~~~~-~~i~~~G~  219 (394)
T 2jjm_A          151 --R-----FGIEQSDVVTAVSHSLINETHELVKP-NKDIQTVYNFIDERVYFKRD--MTQLKKEYGISESE-KILIHISN  219 (394)
T ss_dssp             --H-----HHHHHSSEEEESCHHHHHHHHHHTCC-SSCEEECCCCCCTTTCCCCC--CHHHHHHTTCC----CEEEEECC
T ss_pred             --H-----HHHhhCCEEEECCHHHHHHHHHhhCC-cccEEEecCCccHHhcCCcc--hHHHHHHcCCCCCC-eEEEEeec
Confidence              1     33567999999999999999997664 57999999999998876543  36788899987666 78899999


Q ss_pred             eccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh------CCcEEEeCccCHHHHHHHHHhcCEEEeCC
Q 011355          302 LVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL------GTNVIVLGPLDQTRLAMFYNAIDIFVNPT  375 (488)
Q Consensus       302 l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~l~~~~~~adv~v~ps  375 (488)
                      +.+.||++.+++|++.+.++     ++++|+|+|+|+..+.++++      .++|.|+|+  .+++.++|+.||++|+||
T Consensus       220 ~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps  292 (394)
T 2jjm_A          220 FRKVKRVQDVVQAFAKIVTE-----VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDLMLLLS  292 (394)
T ss_dssp             CCGGGTHHHHHHHHHHHHHS-----SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSEEEECC
T ss_pred             cccccCHHHHHHHHHHHHhh-----CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCEEEecc
Confidence            99999999999999999765     36899999999877666542      478999997  569999999999999999


Q ss_pred             CCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhC
Q 011355          376 LRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLF  454 (488)
Q Consensus       376 ~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~f  454 (488)
                      . .||+|++++|||+||+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+++|++++++.+.++|
T Consensus       293 ~-~e~~~~~~~EAma~G~PvI~~~~~~~~-e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~  369 (394)
T 2jjm_A          293 E-KESFGLVLLEAMACGVPCIGTRVGGIP-EVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARESVYEQF  369 (394)
T ss_dssp             S-CCSCCHHHHHHHHTTCCEEEECCTTST-TTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHS
T ss_pred             c-cCCCchHHHHHHhcCCCEEEecCCChH-HHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhC
Confidence            7 599999999999999999999999998 89999999999999 999999999999998 9999999999999998889


Q ss_pred             CHHHHHHHHHHHHHHhhccccCC
Q 011355          455 TATKMAAAYERLFLCISNDEKNG  477 (488)
Q Consensus       455 s~~~~~~~~~~~~~~~~~~~~~~  477 (488)
                      +|+.+++++.++|++++++.+++
T Consensus       370 s~~~~~~~~~~~~~~~~~~~~~~  392 (394)
T 2jjm_A          370 RSEKIVSQYETIYYDVLRDDKNG  392 (394)
T ss_dssp             CHHHHHHHHHHHHHHTC------
T ss_pred             CHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999998866543

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=7.4e-43  Score=344.22  Aligned_cols=344  Identities=15%  Similarity=0.134  Sum_probs=262.0

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEec---CCCCccCcchhHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHL---SKPTAAGYLDQSIVWQ  153 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~  153 (488)
                      |||++++..+|   ..||+++++..|+++|+++ |+|++++....+.... ..........   ........+......+
T Consensus         1 MkI~~v~~~~p---~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   75 (413)
T 3oy2_A            1 MKLIIVGAHSS---VPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVH-ANIEEFDAQTAEHVRGLNEQGFYYSGLSE   75 (413)
T ss_dssp             CEEEEEEECTT---CCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSC-SSSEEEEHHHHHHHTTCCSTTCCHHHHHH
T ss_pred             CeEEEecCCCC---CCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccc-cccccCCccccccccccccccchHHHHHH
Confidence            89999997664   4699999999999999999 9999999876532111 1111000000   0000000122222222


Q ss_pred             HHHHHhcCCCCCcEEEeCCcchH----HhhhccCC---cEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHH
Q 011355          154 QLQTQNSTGKPFDVIHTESVGLR----HTRARNLT---NVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVV  226 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~~~~~----~~~~~~~p---~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      .+ ...    +||+||+|.....    .....++|   ..+..+|......               ..  .         
T Consensus        76 ~l-~~~----~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~--~---------  124 (413)
T 3oy2_A           76 FI-DVH----KPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNI---------------RE--N---------  124 (413)
T ss_dssp             HH-HHH----CCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSC---------------CG--G---------
T ss_pred             HH-Hhc----CCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhh---------------HH--H---------
Confidence            22 222    8999999953211    11112233   2455555432110               00  0         


Q ss_pred             HHhhhcCCcc--EEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCC--CCcEEEEEEeee
Q 011355          227 EEVKFFPKYA--HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPE--NRSLVLGMAGRL  302 (488)
Q Consensus       227 ~~~~~~~~~d--~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~--~~~~~i~~~Grl  302 (488)
                       ....++++|  .++++|+..++.+.+ +|. +.++.+||||+|.+.+       ...++++++++  ++ ++++++||+
T Consensus       125 -~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~-~~~~~vi~ngvd~~~~-------~~~~~~~~~~~~~~~-~~il~vGr~  193 (413)
T 3oy2_A          125 -LWWIFSHPKVVGVMAMSKCWISDICN-YGC-KVPINIVSHFVDTKTI-------YDARKLVGLSEYNDD-VLFLNMNRN  193 (413)
T ss_dssp             -GGGGGGCTTEEEEEESSTHHHHHHHH-TTC-CSCEEECCCCCCCCCC-------TTHHHHTTCGGGTTS-EEEECCSCS
T ss_pred             -HHHHHhccCCceEEEcCHHHHHHHHH-cCC-CCceEEeCCCCCHHHH-------HHHHHhcCCCcccCc-eEEEEcCCC
Confidence             115678877  999999999999999 777 6899999999999877       34677788876  55 899999999


Q ss_pred             ccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch------hHHhh------hCCc-------EEEeCccCHHHHHH
Q 011355          303 VKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG------ARYRD------LGTN-------VIVLGPLDQTRLAM  363 (488)
Q Consensus       303 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~------~~~~~------l~~~-------V~~~g~v~~~~l~~  363 (488)
                      .+.||++.+++|+..+.++.    ++++|+|+|+|+..      +.+++      +.++       |.+.|+++++++.+
T Consensus       194 ~~~Kg~~~li~a~~~l~~~~----~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~  269 (413)
T 3oy2_A          194 TARKRLDIYVLAAARFISKY----PDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDM  269 (413)
T ss_dssp             SGGGTHHHHHHHHHHHHHHC----TTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHH
T ss_pred             chhcCcHHHHHHHHHHHHhC----CCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHH
Confidence            99999999999999999988    89999999998754      55544      3454       88899999999999


Q ss_pred             HHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCc---------------ee--EeCC-CHHHHH
Q 011355          364 FYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDM---------------GY--LFSP-QVESVK  425 (488)
Q Consensus       364 ~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~---------------g~--l~~~-d~~~la  425 (488)
                      +|+.||++|+||. .||||++++|||+||+|||+++.+|.. |++.++.+               |+  ++++ |+++++
T Consensus       270 ~~~~adv~v~pS~-~E~~~~~~lEAma~G~PvI~s~~~g~~-e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la  347 (413)
T 3oy2_A          270 MYNACDVIVNCSS-GEGFGLCSAEGAVLGKPLIISAVGGAD-DYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLV  347 (413)
T ss_dssp             HHHHCSEEEECCS-CCSSCHHHHHHHTTTCCEEEECCHHHH-HHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHH
T ss_pred             HHHhCCEEEeCCC-cCCCCcHHHHHHHcCCCEEEcCCCChH-HHHccCcccccccccccccccccCcceeeCCCCHHHHH
Confidence            9999999999997 599999999999999999999999998 88888877               99  9998 999999


Q ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhcccc
Q 011355          426 KALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDEK  475 (488)
Q Consensus       426 ~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~  475 (488)
                      ++| +++++ ++.+++|++++++.+.++|||+.+++++.++|++++++..
T Consensus       348 ~~i-~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~  395 (413)
T 3oy2_A          348 EAF-TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVES  395 (413)
T ss_dssp             HHH-HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC---
T ss_pred             HHH-HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Confidence            999 99998 9999999999999998899999999999999999988553

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=9.9e-43  Score=343.62  Aligned_cols=352  Identities=17%  Similarity=0.159  Sum_probs=259.1

Q ss_pred             CCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCC-Cc-cCc--ch-h
Q 011355           74 LKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKP-TA-AGY--LD-Q  148 (488)
Q Consensus        74 ~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~--~~-~  148 (488)
                      +++|||++++..    ...||+++++.+++++|.+.||+|++++..........  ...+....... .. ...  +. +
T Consensus        38 ~~~mkIl~v~~~----~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  111 (416)
T 2x6q_A           38 LKGRSFVHVNST----SFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNV--TKTFHNALQGNESLKLTEEMKELY  111 (416)
T ss_dssp             TTTCEEEEEESC----SSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHH--HHHHHHHHTTCCSCCCCHHHHHHH
T ss_pred             hhccEEEEEeCC----CCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhh--hcccceeecccccccccHHHHHHH
Confidence            467999999974    25799999999999999999999999987643110000  00000000000 00 000  00 1


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEeCCcc---hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHH
Q 011355          149 SIVWQQLQTQNSTGKPFDVIHTESVG---LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKV  225 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Dvv~~~~~~---~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      ......+....+.. +||+||+|+..   +..+.....| ++++.|+.....             .    ......+.  
T Consensus       112 ~~~~~~~~~~l~~~-~~Dvv~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~-------------~----~~~~~~~~--  170 (416)
T 2x6q_A          112 LNVNRENSKFIDLS-SFDYVLVHDPQPAALIEFYEKKSP-WLWRCHIDLSSP-------------N----REFWEFLR--  170 (416)
T ss_dssp             HHHHHHHHHSSCGG-GSSEEEEESSTTGGGGGGSCCCSC-EEEECCSCCSSC-------------C----HHHHHHHH--
T ss_pred             HHHHHHHHHHHhhc-CCCEEEEeccchhhHHHHHHhcCC-EEEEEccccCCc-------------c----HHHHHHHH--
Confidence            11112222223333 89999999743   2222233356 999999853210             0    12222222  


Q ss_pred             HHHhhhcCCccEEE-EcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCC---cccchhhhhhhCCCCCCcEEEEEEee
Q 011355          226 VEEVKFFPKYAHHV-ATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPD---VAMGKDFKKKFGIPENRSLVLGMAGR  301 (488)
Q Consensus       226 ~~~~~~~~~~d~ii-~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~---~~~~~~~r~~~~i~~~~~~~i~~~Gr  301 (488)
                          +.+.++|.++ ++|+...+      +++..++.+||||+|...+...   +.....+|+++++++++ ++++++||
T Consensus       171 ----~~~~~~~~~i~~~s~~~~~------~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vGr  239 (416)
T 2x6q_A          171 ----RFVEKYDRYIFHLPEYVQP------ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEK-PIITQVSR  239 (416)
T ss_dssp             ----HHHTTSSEEEESSGGGSCT------TSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTS-CEEEEECC
T ss_pred             ----HHHHhCCEEEEechHHHHh------hCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCC-cEEEEEec
Confidence                3356778776 55665543      2345789999999998766432   23346788999998777 78899999


Q ss_pred             eccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCc-----hhHHhh------hCCcEEEeCccC---HHHHHHHHHh
Q 011355          302 LVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPW-----GARYRD------LGTNVIVLGPLD---QTRLAMFYNA  367 (488)
Q Consensus       302 l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~-----~~~~~~------l~~~V~~~g~v~---~~~l~~~~~~  367 (488)
                      +.+.||++.+++|+..+.++.    |+++|+|+|+|+.     .+.+++      +.++|+|+|+++   ++++.++|+.
T Consensus       240 l~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~  315 (416)
T 2x6q_A          240 FDPWKGIFDVIEIYRKVKEKI----PGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRA  315 (416)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHC----TTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHH
T ss_pred             cccccCHHHHHHHHHHHHHhC----CCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHh
Confidence            999999999999999999888    8999999999864     222222      347999999654   7899999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVAR  447 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~  447 (488)
                      ||++|+||. .||||++++|||+||+|||+++.++.+ |++.++.+|++++ |+++++++|.+++++ ++.+++|+++++
T Consensus       316 ad~~v~ps~-~E~~~~~~lEAma~G~PvI~~~~~g~~-e~i~~~~~g~l~~-d~~~la~~i~~ll~~-~~~~~~~~~~a~  391 (416)
T 2x6q_A          316 SDVILQMSI-REGFGLTVTEAMWKGKPVIGRAVGGIK-FQIVDGETGFLVR-DANEAVEVVLYLLKH-PEVSKEMGAKAK  391 (416)
T ss_dssp             CSEEEECCS-SCSSCHHHHHHHHTTCCEEEESCHHHH-HHCCBTTTEEEES-SHHHHHHHHHHHHHC-HHHHHHHHHHHH
T ss_pred             CCEEEECCC-cCCCccHHHHHHHcCCCEEEccCCCCh-hheecCCCeEEEC-CHHHHHHHHHHHHhC-HHHHHHHHHHHH
Confidence            999999997 499999999999999999999999988 8999999999999 999999999999998 999999999999


Q ss_pred             HHHhhhCCHHHHHHHHHHHHHHhh
Q 011355          448 KRGLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       448 ~~~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                      +.+.++|||+.+++++.++|++++
T Consensus       392 ~~~~~~fs~~~~~~~~~~~~~~l~  415 (416)
T 2x6q_A          392 ERVRKNFIITKHMERYLDILNSLG  415 (416)
T ss_dssp             HHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHhh
Confidence            999988999999999999998765

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=1.3e-42  Score=337.78  Aligned_cols=359  Identities=16%  Similarity=0.178  Sum_probs=261.8

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      |||++++..+++   .||+++++.+++++|+++||+|++++........  .+.....+....  .............+.
T Consensus         1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~~~~v~~~~~~~--~~~~~~~~~~~~~l~   73 (374)
T 2iw1_A            1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP--KAFELIQVPVKS--HTNHGRNAEYYAWVQ   73 (374)
T ss_dssp             -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC--TTCEEEECCCCC--SSHHHHHHHHHHHHH
T ss_pred             CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCC--CCcEEEEEccCc--ccchhhHHHHHHHHH
Confidence            899999987654   5999999999999999999999999987433221  222222221111  111111222223333


Q ss_pred             HHhcCCCCCcEEEeCCcchHHhhhccCCcEEEeeeCCcchh---hhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcC
Q 011355          157 TQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYET---IHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFP  233 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~~~~~~~~~p~~v~~~h~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (488)
                      ...+.. +||+||+++.....      + .....+......   .+... ..   .  ... ......+.+.   ....+
T Consensus        74 ~~i~~~-~~Dvv~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~-~~---~--~~~-~~~~~~~~~~---~~~~~  135 (374)
T 2iw1_A           74 NHLKEH-PADRVVGFNKMPGL------D-VYFAADVCYAEKVAQEKGFL-YR---L--TSR-YRHYAAFERA---TFEQG  135 (374)
T ss_dssp             HHHHHS-CCSEEEESSCCTTC------S-EEECCSCCHHHHHHHHCCHH-HH---T--SHH-HHHHHHHHHH---HHSTT
T ss_pred             HHHhcc-CCCEEEEecCCCCc------e-eeeccccccceeeeecccch-hh---h--cHH-HHHHHHHHHH---Hhhcc
Confidence            333333 89999998642211      1 111111110000   00000 00   0  000 1111222211   11124


Q ss_pred             CccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcc--cchhhhhhhCCCCCCcEEEEEEeeeccccChHHH
Q 011355          234 KYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVA--MGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLM  311 (488)
Q Consensus       234 ~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~--~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~l  311 (488)
                      .+|.++++|+..++.+.+.+|++..++.++|||+|.+.+.+...  .+..+++++++++++ ++++++|++.+.||++.+
T Consensus       136 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~K~~~~l  214 (374)
T 2iw1_A          136 KSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-NLLLQVGSDFGRKGVDRS  214 (374)
T ss_dssp             CCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC-EEEEEECSCTTTTTHHHH
T ss_pred             CCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCC-eEEEEeccchhhcCHHHH
Confidence            79999999999999999988998899999999999987765432  245789999998777 889999999999999999


Q ss_pred             HHHHHHhHhh-ccCCCCCeEEEEEeCCCchhHHhh----h--CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          312 FEALKQLLAE-NDTFRRSTVFLVAGDGPWGARYRD----L--GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       312 l~a~~~l~~~-~~~~~~~~~l~ivG~g~~~~~~~~----l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      ++|+..+.++ .    ++++|+++|+|+. +.+++    +  .++|+|+|+  .+++.++|+.||++|+||. .||+|++
T Consensus       215 i~a~~~l~~~~~----~~~~l~i~G~g~~-~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~v~ps~-~e~~~~~  286 (374)
T 2iw1_A          215 IEALASLPESLR----HNTLLFVVGQDKP-RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAADLLLHPAY-QEAAGIV  286 (374)
T ss_dssp             HHHHHTSCHHHH----HTEEEEEESSSCC-HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHCSEEEECCS-CCSSCHH
T ss_pred             HHHHHHhHhccC----CceEEEEEcCCCH-HHHHHHHHHcCCCCcEEECCC--cccHHHHHHhcCEEEeccc-cCCcccH
Confidence            9999998776 5    7899999999874 33332    2  479999998  5699999999999999997 5999999


Q ss_pred             HHHHHHcCCcEEEeCCCCcccceeecCCceeEeC-C-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHH
Q 011355          385 VLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFS-P-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAA  462 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~-~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~  462 (488)
                      ++|||+||+|||+++.++.. +++.++.+|++++ + |+++++++|.+++++ ++.++++++++++.+.+ |+|+.++++
T Consensus       287 ~~Ea~a~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~  363 (374)
T 2iw1_A          287 LLEAITAGLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDLYSLPEK  363 (374)
T ss_dssp             HHHHHHHTCCEEEETTSTTT-HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH-SCCSCHHHH
T ss_pred             HHHHHHCCCCEEEecCCCch-hhhccCCceEEeCCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHH-hhHHHHHHH
Confidence            99999999999999999998 8999999999998 7 999999999999998 99999999999999976 799999999


Q ss_pred             HHHHHHHhhc
Q 011355          463 YERLFLCISN  472 (488)
Q Consensus       463 ~~~~~~~~~~  472 (488)
                      +.++++..++
T Consensus       364 ~~~~l~~~l~  373 (374)
T 2iw1_A          364 AADIITGGLD  373 (374)
T ss_dssp             HHHHHHCC--
T ss_pred             HHHHHHHhhc
Confidence            9999886543

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=100.00  E-value=2.1e-41  Score=340.45  Aligned_cols=383  Identities=16%  Similarity=0.165  Sum_probs=260.2

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC---------------------CCCceE
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT---------------------YPISSL  133 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~---------------------~~~~~i  133 (488)
                      .+|||+++++.++|....||...++..|.++|+++||+|.|+++..+......                     ....++
T Consensus         8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv   87 (536)
T 3vue_A            8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV   87 (536)
T ss_dssp             CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred             CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence            67999999998877667899999999999999999999999997654322110                     000111


Q ss_pred             EEec-CCCC------------ccC------cchhHHH---H-HHHH---HHhc---------CCCCCcEEEeCCcc---h
Q 011355          134 YFHL-SKPT------------AAG------YLDQSIV---W-QQLQ---TQNS---------TGKPFDVIHTESVG---L  175 (488)
Q Consensus       134 ~~~~-~~~~------------~~~------~~~~~~~---~-~~~~---~~~~---------~~~~~Dvv~~~~~~---~  175 (488)
                      .+.. ..+.            .++      ..+....   + +...   ....         ....+||+|+|+..   +
T Consensus        88 ~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l~  167 (536)
T 3vue_A           88 DRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPL  167 (536)
T ss_dssp             EEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGSTH
T ss_pred             eEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHHH
Confidence            1110 0000            000      0000000   1 1111   1110         12257888898642   2


Q ss_pred             HHhhh---------ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH---------HHHHHHhhhcCCccE
Q 011355          176 RHTRA---------RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA---------SKVVEEVKFFPKYAH  237 (488)
Q Consensus       176 ~~~~~---------~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d~  237 (488)
                      +.++.         ..+| ++.++|+..+..............+....  ......         .........+..+|.
T Consensus       168 ~~~l~~~~~~~~~~~~~~-~V~TiHnl~~qg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~  244 (536)
T 3vue_A          168 ASYLKNNYQPNGIYRNAK-VAFCIHNISYQGRFAFEDYPELNLSERFR--SSFDFIDGYDTPVEGRKINWMKAGILEADR  244 (536)
T ss_dssp             HHHHHHHTTTTTSSTTCE-EEEEESCTTCCCEEEGGGGGGGCCCGGGH--HHHEEEETTTSTTCEEEEEHHHHHHHHCSE
T ss_pred             HHHHHHhhhhhhhhcccc-eeeeecCcccccccchhhhhhcCCchhhc--chhhhhhcccccccccchhHHHHHHHhccE
Confidence            22222         2456 99999987553221100000001110000  000000         000000123457999


Q ss_pred             EEEcChhhHHHHHHHhc--------CCCCcEEEecCCccCCCcCCCcc------------------cchhhhhhhCCCCC
Q 011355          238 HVATSDHCGDVLKRIYM--------IPEERVHVILNGVDEEVFKPDVA------------------MGKDFKKKFGIPEN  291 (488)
Q Consensus       238 ii~~S~~~~~~~~~~~g--------~~~~~i~vi~ngvd~~~~~~~~~------------------~~~~~r~~~~i~~~  291 (488)
                      |+++|+..++.+.+.++        ....++.+|+||||.+.+.+...                  .+..+++++|++.+
T Consensus       245 v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d  324 (536)
T 3vue_A          245 VLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVD  324 (536)
T ss_dssp             EEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCC
T ss_pred             EEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCC
Confidence            99999999999877554        23568999999999998876421                  23456777887643


Q ss_pred             C-cEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--hHHh----hhCCcEEEeCccCHHHHHHH
Q 011355          292 R-SLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--ARYR----DLGTNVIVLGPLDQTRLAMF  364 (488)
Q Consensus       292 ~-~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--~~~~----~l~~~V~~~g~v~~~~l~~~  364 (488)
                      + .++|+++||+.++||++.+++|+.++.+      .+.+++++|.|+..  ..++    .+..+|.+.+..+.+++..+
T Consensus       325 ~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~------~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  398 (536)
T 3vue_A          325 RKIPLIAFIGRLEEQKGPDVMAAAIPELMQ------EDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLI  398 (536)
T ss_dssp             TTSCEEEEECCBSGGGCHHHHHHHHHHHTT------SSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred             CCCcEEEEEeeccccCChHHHHHHHHHhHh------hCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence            2 3789999999999999999999999976      45678888877643  2222    25589999999999999999


Q ss_pred             HHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCcee----------EeCC-CHHHHHHHHHHHHh
Q 011355          365 YNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGY----------LFSP-QVESVKKALYGIWA  433 (488)
Q Consensus       365 ~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~----------l~~~-d~~~la~~i~~ll~  433 (488)
                      |+.||++|+||.+ ||||++++|||+||+|||+|++||++ |+|.++.+|+          ++++ |+++|+++|.++++
T Consensus       399 ~~~aD~~v~PS~~-E~fgl~~lEAma~G~PvI~s~~gG~~-e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~  476 (536)
T 3vue_A          399 MAGADVLAVPSRF-EPCGLIQLQGMRYGTPCACASTGGLV-DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK  476 (536)
T ss_dssp             HHHCSEEEECCSC-CSSCSHHHHHHHTTCCEEECSCTHHH-HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred             HHhhheeeccccc-CCCCHHHHHHHHcCCCEEEcCCCCch-heeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence            9999999999975 99999999999999999999999998 9999999998          6777 89999999998876


Q ss_pred             --cCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhc
Q 011355          434 --DGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       434 --~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~  472 (488)
                        + .+.+++|++++   +.++|||++++++|+++|+++..
T Consensus       477 ~~~-~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~~  513 (536)
T 3vue_A          477 VVG-TPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLGV  513 (536)
T ss_dssp             HTT-SHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTCC
T ss_pred             hcC-cHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhhh
Confidence              4 34567777666   44679999999999999999743

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=9.5e-42  Score=353.27  Aligned_cols=379  Identities=13%  Similarity=0.102  Sum_probs=268.2

Q ss_pred             CCceEEEEEecCCC-------CCCCCCcHHHHHHH--------HHHHHHHCCCeEE----EEecCCCCCCCCC-------
Q 011355           74 LKLLKIALFVKKWP-------HRSHAGGLERHALT--------LHLALAKRGHELH----IFTASCLNCSFPT-------  127 (488)
Q Consensus        74 ~~~mkIl~i~~~~p-------~~~~~gG~~~~~~~--------l~~~L~~~G~~V~----v~~~~~~~~~~~~-------  127 (488)
                      ++.|+|++++.+..       -.+..||...|+.+        |+++|+++||+|+    |+|....+.....       
T Consensus       276 ~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~  355 (816)
T 3s28_A          276 PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLER  355 (816)
T ss_dssp             CCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEE
T ss_pred             CceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCccee
Confidence            35689999998653       11378999999995        6666677899886    8888754431111       


Q ss_pred             -C---CCceEEEecCCC--------CccCcchhHHHHH--HHHHHhc-CCCCCcEEEeCCcc-----hHHhhhccCCcEE
Q 011355          128 -Y---PISSLYFHLSKP--------TAAGYLDQSIVWQ--QLQTQNS-TGKPFDVIHTESVG-----LRHTRARNLTNVV  187 (488)
Q Consensus       128 -~---~~~~i~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~-~~~~~Dvv~~~~~~-----~~~~~~~~~p~~v  187 (488)
                       .   +...++++....        .....+.+...+.  .+..... ...+|||||+|...     .......++| ++
T Consensus       356 i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP-~V  434 (816)
T 3s28_A          356 VYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT-QC  434 (816)
T ss_dssp             CTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCC-EE
T ss_pred             ecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCC-EE
Confidence             1   223333332211        0112233322222  1222221 12279999999632     1222334678 99


Q ss_pred             EeeeCCcchhhhhhhhHhhhcCCCChh--HHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH---hc--------
Q 011355          188 VSWHGIAYETIHSDIIQELLRTPEEPQ--AYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI---YM--------  254 (488)
Q Consensus       188 ~~~h~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---~g--------  254 (488)
                      .+.|+........         ....+  ....+....+...+...++.+|.|+++|+..++.+.+.   |+        
T Consensus       435 ~T~Hsl~~~k~~~---------~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p  505 (816)
T 3s28_A          435 TIAHALEKTKYPD---------SDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLP  505 (816)
T ss_dssp             EECSCCHHHHSTT---------TTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEET
T ss_pred             EEEeccccccccc---------ccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccc
Confidence            9999864332110         00000  01122222233334456889999999999988852221   21        


Q ss_pred             ----------CCCCcEEEecCCccCCCcCCCcccc-----------------hhhhhhhCC--CCCCcEEEEEEeeeccc
Q 011355          255 ----------IPEERVHVILNGVDEEVFKPDVAMG-----------------KDFKKKFGI--PENRSLVLGMAGRLVKD  305 (488)
Q Consensus       255 ----------~~~~~i~vi~ngvd~~~~~~~~~~~-----------------~~~r~~~~i--~~~~~~~i~~~Grl~~~  305 (488)
                                ....++.|||||+|.+.|.+.....                 ...++.+|+  ++++ ++|+++||+.+.
T Consensus       506 ~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~-~vIl~vGRl~~~  584 (816)
T 3s28_A          506 GLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKK-PILFTMARLDRV  584 (816)
T ss_dssp             TTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTS-CEEEEECCCCTT
T ss_pred             hhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCC-eEEEEEccCccc
Confidence                      1223999999999999887654221                 234566666  4455 789999999999


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC-----------chhHHhh------hCCcEEEeCc----cCHHHHHHH
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP-----------WGARYRD------LGTNVIVLGP----LDQTRLAMF  364 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~-----------~~~~~~~------l~~~V~~~g~----v~~~~l~~~  364 (488)
                      ||++.+++|+..+.+..    ++++|+|+|+|+           ..+.+++      +.++|.|+|+    ++.+++..+
T Consensus       585 KGid~LIeA~~~L~~~~----~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~  660 (816)
T 3s28_A          585 KNLSGLVEWYGKNTRLR----ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRY  660 (816)
T ss_dssp             TTHHHHHHHHHHCHHHH----HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhhC----CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHH
Confidence            99999999999998887    899999999988           2333332      3489999994    446899999


Q ss_pred             HH-hcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHH----hcCHHH
Q 011355          365 YN-AIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIW----ADGREV  438 (488)
Q Consensus       365 ~~-~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll----~~~~~~  438 (488)
                      |+ ++|++|+||. .||||++++|||+||+|||+|+.||.. |++.++.+|+++++ |+++++++|.+++    .| ++.
T Consensus       661 ~~~aaDvfV~PS~-~EgfglvllEAMA~G~PVIasd~GG~~-EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d-~~~  737 (816)
T 3s28_A          661 ICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPA-EIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED-PSH  737 (816)
T ss_dssp             HHHTTCEEEECCS-CBSSCHHHHHHHHTTCCEEEESSBTHH-HHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC-THH
T ss_pred             HHhcCeEEEECCC-ccCccHHHHHHHHcCCCEEEeCCCChH-HHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccC-HHH
Confidence            98 5799999997 599999999999999999999999998 99999999999999 9999999997776    77 899


Q ss_pred             HHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Q 011355          439 LEKKGLVARKRGLNLFTATKMAAAYERLFLCI  470 (488)
Q Consensus       439 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~  470 (488)
                      +++|++++++.+.++|||+.+++++.++|+..
T Consensus       738 ~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~  769 (816)
T 3s28_A          738 WDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY  769 (816)
T ss_dssp             HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            99999999999989999999999999999864

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=1e-40  Score=320.39  Aligned_cols=311  Identities=17%  Similarity=0.185  Sum_probs=244.7

Q ss_pred             CCceEEEEEecC-----------CCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCc
Q 011355           74 LKLLKIALFVKK-----------WPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTA  142 (488)
Q Consensus        74 ~~~mkIl~i~~~-----------~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~  142 (488)
                      |++|||++++..           ||| ...||+++++.+++++|.++||+|++++........     ..+.+....   
T Consensus         1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~-----~~~~~~~~~---   71 (342)
T 2iuy_A            1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR-----PGLTVVPAG---   71 (342)
T ss_dssp             --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----TTEEECSCC---
T ss_pred             CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----CcceeccCC---
Confidence            356999999987           344 256999999999999999999999999987643321     233332211   


Q ss_pred             cCcchhHHHHHHHHHHhcCCCCCcEEEeCCcchHH--hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHH
Q 011355          143 AGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRH--TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAE  220 (488)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~--~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (488)
                       .   ..    .+....++. +||+||+|+.....  ....+.|  +.+.|+.....                       
T Consensus        72 -~---~~----~l~~~l~~~-~~Dvi~~~~~~~~~~~~~~~~~p--v~~~h~~~~~~-----------------------  117 (342)
T 2iuy_A           72 -E---PE----EIERWLRTA-DVDVVHDHSGGVIGPAGLPPGTA--FISSHHFTTRP-----------------------  117 (342)
T ss_dssp             -S---HH----HHHHHHHHC-CCSEEEECSSSSSCSTTCCTTCE--EEEEECSSSBC-----------------------
T ss_pred             -c---HH----HHHHHHHhc-CCCEEEECCchhhHHHHhhcCCC--EEEecCCCCCc-----------------------
Confidence             1   11    222222233 89999999744222  2223445  88899864311                       


Q ss_pred             HHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEe
Q 011355          221 RASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG  300 (488)
Q Consensus       221 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  300 (488)
                                  ..+|.++++|+..++.+.+     ..++.+||||+|.+.+.+....         . +++ .+++++|
T Consensus       118 ------------~~~d~ii~~S~~~~~~~~~-----~~~~~vi~ngvd~~~~~~~~~~---------~-~~~-~~i~~vG  169 (342)
T 2iuy_A          118 ------------VNPVGCTYSSRAQRAHCGG-----GDDAPVIPIPVDPARYRSAADQ---------V-AKE-DFLLFMG  169 (342)
T ss_dssp             ------------SCCTTEEESCHHHHHHTTC-----CTTSCBCCCCBCGGGSCCSTTC---------C-CCC-SCEEEES
T ss_pred             ------------ccceEEEEcCHHHHHHHhc-----CCceEEEcCCCChhhcCccccc---------C-CCC-CEEEEEe
Confidence                        1188999999999988765     5789999999998877654321         1 233 4688999


Q ss_pred             eeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh----hCCcEEEeCccCHHHHHHHHHhcCEEEeCCC
Q 011355          301 RLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD----LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTL  376 (488)
Q Consensus       301 rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~----l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~  376 (488)
                      |+.+.||++.+++|++.+         +++|+|+|+|+..+.+++    ++++|+|+|+++++++.++|+.||++|+||.
T Consensus       170 ~~~~~Kg~~~li~a~~~~---------~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~  240 (342)
T 2iuy_A          170 RVSPHKGALEAAAFAHAC---------GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQ  240 (342)
T ss_dssp             CCCGGGTHHHHHHHHHHH---------TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCC
T ss_pred             ccccccCHHHHHHHHHhc---------CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCc
Confidence            999999999999999876         468999999987766655    4589999999999999999999999999997


Q ss_pred             ---------CCCCCChHHHHHHHcCCcEEEeCCCCcccceeec--CCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011355          377 ---------RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVG--TDMGYLFSPQVESVKKALYGIWADGREVLEKKGLV  445 (488)
Q Consensus       377 ---------~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~--~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~  445 (488)
                               +.||||++++|||+||+|||+++.++.. |++.+  +.+|+++++|+++++++|.++++         +++
T Consensus       241 ~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~-e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~---------~~~  310 (342)
T 2iuy_A          241 AVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLA-EIVPSVGEVVGYGTDFAPDEARRTLAGLPA---------SDE  310 (342)
T ss_dssp             CCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHH-HHGGGGEEECCSSSCCCHHHHHHHHHTSCC---------HHH
T ss_pred             ccccccccccccCccHHHHHHHhcCCCEEEcCCCChH-HHhcccCCCceEEcCCCHHHHHHHHHHHHH---------HHH
Confidence                     2599999999999999999999999998 89988  89999998899999999999876         578


Q ss_pred             HHHHHhhhCCHHHHHHHHHHHHHHhhccc
Q 011355          446 ARKRGLNLFTATKMAAAYERLFLCISNDE  474 (488)
Q Consensus       446 a~~~~~~~fs~~~~~~~~~~~~~~~~~~~  474 (488)
                      +++.+.++|+|+.+++++.++|+++++.+
T Consensus       311 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  339 (342)
T 2iuy_A          311 VRRAAVRLWGHVTIAERYVEQYRRLLAGA  339 (342)
T ss_dssp             HHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence            88888888999999999999999998753

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=100.00  E-value=1.5e-39  Score=317.82  Aligned_cols=349  Identities=11%  Similarity=0.025  Sum_probs=228.7

Q ss_pred             CCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHH
Q 011355           74 LKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQ  153 (488)
Q Consensus        74 ~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  153 (488)
                      .++|||++++..|+|+...||. +.+.+++++|+++||+|+|++.................+..................
T Consensus        44 ~~~mrI~~v~~~~~p~~~~GG~-~~v~~la~~L~~~GheV~Vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  122 (413)
T 2x0d_A           44 IKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATPNPKDLQSFKSFKYVMPEEDKDFALQIVPFND  122 (413)
T ss_dssp             CCSCEEEEEESCCCGGGCSHHH-HHHHHHHTTSCTTTCEEEEEESSCCCCHHHHGGGTTSEECCTTCCCCCSEEEEECSC
T ss_pred             CCCceEEEEeCCCCccccccHH-HHHHHHHHHHHHcCCceEEEEecCCCChHHHHhhhccceeeccCCccccceeeeccc
Confidence            3679999999999874334555 568899999999999999999864211000000111111000000000000000000


Q ss_pred             HHHHHhcCCCCCcEEEeCCcchHHhhh------------ccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHH
Q 011355          154 QLQTQNSTGKPFDVIHTESVGLRHTRA------------RNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAER  221 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~~~~~~~~~------------~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      .+...... .++|+||+++........            ...+ .+...|+.....           .+...  .   ..
T Consensus       123 ~~~~~~~~-~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-----------~~~~~--~---~~  184 (413)
T 2x0d_A          123 RYNRTIPV-AKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNK-ILYIIQDFEPGF-----------YQWSS--Q---YV  184 (413)
T ss_dssp             CTTCCEEE-CTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCC-EEEEECSCGGGG-----------SCSSH--H---HH
T ss_pred             cccccccC-CCCCEEEEehHHHHHHHHHhhhhhhhhcccccCc-EEEEEeechhhc-----------CccCh--H---HH
Confidence            00000111 179999998743221111            1224 666677653321           01100  0   01


Q ss_pred             HHHHHHHhhhcCCcc--EEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEE
Q 011355          222 ASKVVEEVKFFPKYA--HHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMA  299 (488)
Q Consensus       222 ~~~~~~~~~~~~~~d--~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~  299 (488)
                      +.     ...+..++  .++++|++.++.+.+ +|++..++.+++||+|.+.+.+..         .+ .+++ ..++++
T Consensus       185 ~~-----~~~~~~~~~~~vi~~S~~~~~~l~~-~g~~~~~~~~i~~g~d~~~~~~~~---------~~-~~~~-~~il~~  247 (413)
T 2x0d_A          185 LA-----ESTYKYRGPQIAVFNSELLKQYFNN-KGYNFTDEYFFQPKINTTLKNYIN---------DK-RQKE-KIILVY  247 (413)
T ss_dssp             HH-----HHTTSCCSCEEEEEESHHHHHHHHH-HTCCCSEEEEECCCCCHHHHTTTT---------SC-CCCC-SEEEEE
T ss_pred             HH-----HHHhccCCceEEEEcCHHHHHHHHH-cCCCCCceEEeCCCcCchhhcccc---------cc-cCCC-CEEEEE
Confidence            11     13455554  589999999999998 677667899999999876443211         11 1233 467789


Q ss_pred             eee-ccccChHHHHHHHHHhHhhccCCCCC---eEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCC
Q 011355          300 GRL-VKDKGHPLMFEALKQLLAENDTFRRS---TVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPT  375 (488)
Q Consensus       300 Grl-~~~Kg~~~ll~a~~~l~~~~~~~~~~---~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps  375 (488)
                      ||+ .+.||++.+++|++.+.++.    |+   ++|+++|+|+....+ .+.++|+|+|+++.+++.++|+.||++|+||
T Consensus       248 gr~~~~~Kg~~~li~A~~~l~~~~----~~~~~~~l~ivG~~~~~~~l-~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS  322 (413)
T 2x0d_A          248 GRPSVKRNAFTLIVEALKIFVQKY----DRSNEWKIISVGEKHKDIAL-GKGIHLNSLGKLTLEDYADLLKRSSIGISLM  322 (413)
T ss_dssp             ECTTCGGGCHHHHHHHHHHHHHHC----TTGGGCEEEEEESCCCCEEE-ETTEEEEEEESCCHHHHHHHHHHCCEEECCC
T ss_pred             ecCchhccCHHHHHHHHHHHHHhC----CCCCceEEEEEcCCchhhhc-CCcCcEEEcCCCCHHHHHHHHHhCCEEEEec
Confidence            996 68899999999999998877    64   899999998765322 2457899999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhC
Q 011355          376 LRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLF  454 (488)
Q Consensus       376 ~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~f  454 (488)
                      . .|+||++++||||||+|||+++ +|.. |++.++.+|+++++ |+++++++|.++++| ++.+++   ++++.+ +.|
T Consensus       323 ~-~E~~g~~~lEAmA~G~PVV~~~-~g~~-e~v~~~~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~---~~~~~~-~~~  394 (413)
T 2x0d_A          323 I-SPHPSYPPLEMAHFGLRVITNK-YENK-DLSNWHSNIVSLEQLNPENIAETLVELCMS-FNNRDV---DKKESS-NMM  394 (413)
T ss_dssp             S-SSSCCSHHHHHHHTTCEEEEEC-BTTB-CGGGTBTTEEEESSCSHHHHHHHHHHHHHH-TC----------CCB-SCG
T ss_pred             C-CCCCCcHHHHHHhCCCcEEEeC-CCcc-hhhhcCCCEEEeCCCCHHHHHHHHHHHHcC-HHHHHH---hHHHHH-HhC
Confidence            7 5999999999999999999955 5666 88888999999999 999999999999998 666655   566666 469


Q ss_pred             CHHHHHHHHHHHHHHhhc
Q 011355          455 TATKMAAAYERLFLCISN  472 (488)
Q Consensus       455 s~~~~~~~~~~~~~~~~~  472 (488)
                      +|+.+.++ .+.|+++.+
T Consensus       395 ~W~~~~~~-~~~~~~l~~  411 (413)
T 2x0d_A          395 FYINEFNE-FSFIKEIEE  411 (413)
T ss_dssp             GGCCCC----TTHHHHHT
T ss_pred             CHHHHHHH-HHHHHHHHh
Confidence            99999877 666666654

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=100.00  E-value=2.5e-33  Score=287.50  Aligned_cols=327  Identities=15%  Similarity=0.138  Sum_probs=238.5

Q ss_pred             CCCceEEEEEecCCCCCCCCCcHHHHHHHHHHH--HHHCCCeEEEEecCCCCCCCCC---CCCceEEEecCCCCccCcch
Q 011355           73 PLKLLKIALFVKKWPHRSHAGGLERHALTLHLA--LAKRGHELHIFTASCLNCSFPT---YPISSLYFHLSKPTAAGYLD  147 (488)
Q Consensus        73 ~~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~--L~~~G~~V~v~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~  147 (488)
                      +.++|||++++..+    ..||+++++.++++.  +.+.||+|++++..........   ....  .+....    . ..
T Consensus       202 ~~~~~rI~~~~~~~----~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~-~~  270 (568)
T 2vsy_A          202 SKGPLRVGFVSNGF----GAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS--TLHDVT----A-LG  270 (568)
T ss_dssp             SSSCEEEEEEESCS----SSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS--EEEECT----T-CC
T ss_pred             CCCCeEEEEECccc----ccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC--eEEECC----C-CC
Confidence            45789999999865    347899999999999  7888999999997532111000   0001  111111    1 11


Q ss_pred             hHHHHHHHHHHhcCCCCCcEEEeCCcc-----hHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          148 QSIVWQQLQTQNSTGKPFDVIHTESVG-----LRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Dvv~~~~~~-----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ..    .+....++. +|||||.+...     +.....+..| +++++|+.....             ...         
T Consensus       271 ~~----~l~~~i~~~-~~Div~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------------~~~---------  322 (568)
T 2vsy_A          271 HL----ATAKHIRHH-GIDLLFDLRGWGGGGRPEVFALRPAP-VQVNWLAYPGTS-------------GAP---------  322 (568)
T ss_dssp             HH----HHHHHHHHT-TCSEEEECSSCTTCSSCHHHHTCCSS-EEEEESSSSSCC-------------CCT---------
T ss_pred             HH----HHHHHHHhC-CCCEEEECCCCCCcchHHHHhcCCCc-eeEeeecCCccc-------------CCC---------
Confidence            11    222222222 89999975421     2223334456 778887642110             000         


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                        .    ..+..+|.++++|+...+     |+   +++.+|||.++.....+. ......|+++|++++. ++ +++|++
T Consensus       323 --~----~~~~~~d~~i~~s~~~~~-----~~---~~i~~ipn~~~~~~~~~~-~~~~~~r~~~~~~~~~-~v-~~~g~~  385 (568)
T 2vsy_A          323 --W----MDYVLGDAFALPPALEPF-----YS---EHVLRLQGAFQPSDTSRV-VAEPPSRTQCGLPEQG-VV-LCCFNN  385 (568)
T ss_dssp             --T----CCEEEECTTTSCTTTGGG-----CS---SEEEECSSCSCCCCTTCC-CCCCCCTGGGTCCTTS-CE-EEECCC
T ss_pred             --C----ceEEEECCCcCCcccccC-----Cc---ceeEcCCCcCCCCCCCCC-CCCCCCccccCCCCCC-EE-EEeCCc
Confidence              0    011246777888886543     32   789999996544321111 1224578889998766 44 489999


Q ss_pred             ccccChHHHHHHHHHhHhhccCCCCCeEEEEEe-CCCchhHHhh------hC-CcEEEeCccCHHHHHHHHHhcCEEEeC
Q 011355          303 VKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-DGPWGARYRD------LG-TNVIVLGPLDQTRLAMFYNAIDIFVNP  374 (488)
Q Consensus       303 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-~g~~~~~~~~------l~-~~V~~~g~v~~~~l~~~~~~adv~v~p  374 (488)
                      .+ ||++.+++++..+.++.    |+++|+|+| +|+..+.+++      +. ++|+|+|+++.+++..+|+.||++|+|
T Consensus       386 ~~-K~~~~li~a~~~l~~~~----~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~p  460 (568)
T 2vsy_A          386 SY-KLNPQSMARMLAVLREV----PDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDT  460 (568)
T ss_dssp             GG-GCCHHHHHHHHHHHHHC----TTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECC
T ss_pred             cc-cCCHHHHHHHHHHHHhC----CCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeC
Confidence            99 99999999999998888    899999999 8887766654      33 789999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEE-------eCCC-------CcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHH
Q 011355          375 TLRAQGLDHTVLEAMLSGKPLMA-------TRLA-------SIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLE  440 (488)
Q Consensus       375 s~~~eg~~~~~lEAma~G~PVI~-------~~~~-------~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~  440 (488)
                      |.+  |+|++++|||+||+|||+       |+.+       |++ |++.+         |+++++++|.++++| ++.++
T Consensus       461 s~~--~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~-e~v~~---------~~~~la~~i~~l~~~-~~~~~  527 (568)
T 2vsy_A          461 HPY--NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLD-EMNVA---------DDAAFVAKAVALASD-PAALT  527 (568)
T ss_dssp             SSS--CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCG-GGBCS---------SHHHHHHHHHHHHHC-HHHHH
T ss_pred             CCC--CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCCh-hhhcC---------CHHHHHHHHHHHhcC-HHHHH
Confidence            974  999999999999999999       9998       877 65533         899999999999999 99999


Q ss_pred             HHHHHHHHHH--hhhCCHHHHHHHHHHHHHHhhcc
Q 011355          441 KKGLVARKRG--LNLFTATKMAAAYERLFLCISND  473 (488)
Q Consensus       441 ~~~~~a~~~~--~~~fs~~~~~~~~~~~~~~~~~~  473 (488)
                      +|++++++.+  .+.|+|+.+++++.++|+++.+.
T Consensus       528 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~  562 (568)
T 2vsy_A          528 ALHARVDVLRRASGVFHMDGFADDFGALLQALARR  562 (568)
T ss_dssp             HHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999998  67899999999999999998873

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=100.00  E-value=5.1e-34  Score=279.05  Aligned_cols=323  Identities=15%  Similarity=0.113  Sum_probs=217.5

Q ss_pred             CceEEEEEecC-CCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC--------------CCCCCCCceEEEecCC
Q 011355           75 KLLKIALFVKK-WPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNC--------------SFPTYPISSLYFHLSK  139 (488)
Q Consensus        75 ~~mkIl~i~~~-~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------~~~~~~~~~i~~~~~~  139 (488)
                      ++|||++++.. ||+  ..+|...   .+++.|+++| +|+|++......              ........++.+....
T Consensus        13 ~~MkIl~is~~~~p~--~~~~~~~---~l~~~l~~~G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~   86 (406)
T 2hy7_A           13 RRPCYLVLSSHDFRT--PRRANIH---FITDQLALRG-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLWR   86 (406)
T ss_dssp             CCSCEEEEESSCTTS--SSCCHHH---HHHHHHHHHS-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEECC
T ss_pred             CCceEEEEecccCCC--hhhhhHh---HHHHHHHhCC-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEeec
Confidence            57999999987 774  4455443   4677788899 999995432100              0000011233332211


Q ss_pred             ---CCcc---CcchhH-----HHH-----HHHHHHhcCCCCCcEEEeCCcchH----HhhhccCCcEEEeeeCCcchhhh
Q 011355          140 ---PTAA---GYLDQS-----IVW-----QQLQTQNSTGKPFDVIHTESVGLR----HTRARNLTNVVVSWHGIAYETIH  199 (488)
Q Consensus       140 ---~~~~---~~~~~~-----~~~-----~~~~~~~~~~~~~Dvv~~~~~~~~----~~~~~~~p~~v~~~h~~~~~~~~  199 (488)
                         ....   ......     ..+     ..+.... .  ++|+||.++....    .....+.| ++.+.|+.....  
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~--~~DvIh~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~--  160 (406)
T 2hy7_A           87 TTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWM-R--ESDVIVFESGIAVAFIELAKRVNPA-AKLVYRASDGLS--  160 (406)
T ss_dssp             BSSCCCCCCCGGGHHHHHHHHHHHHHCCCHHHHHHH-H--HCSEEEEESSGGGGGHHHHHHHCTT-SEEEEEESSCHH--
T ss_pred             cccCCccccchhhhccchhHHHHHHHhHHHHHHHHh-c--CCCEEEECCchHHHHHHHHHHhCCC-EEEEEeccchhh--
Confidence               0000   110000     000     1111111 1  6899996543222    22234567 888999753310  


Q ss_pred             hhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccc
Q 011355          200 SDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG  279 (488)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~  279 (488)
                           ..   ...    .......     ...++++|.++++|+..++.+.+ ++    ++.+||||+|.+.|.+.... 
T Consensus       161 -----~~---~~~----~~~~~~~-----~~~~~~ad~vi~~S~~~~~~~~~-~~----~i~vipngvd~~~f~~~~~~-  217 (406)
T 2hy7_A          161 -----TI---NVA----SYIEREF-----DRVAPTLDVIALVSPAMAAEVVS-RD----NVFHVGHGVDHNLDQLGDPS-  217 (406)
T ss_dssp             -----HH---TCC----HHHHHHH-----HHHGGGCSEEEESCGGGGGGCSC-ST----TEEECCCCBCTTHHHHHCSC-
T ss_pred             -----cc---ccc----HHHHHHH-----HHHHHhCCEEEEcCHHHHHHHHh-cC----CEEEEcCCcChHhcCccccc-
Confidence                 00   000    1111111     14578999999999999988766 33    89999999998876543211 


Q ss_pred             hhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHH
Q 011355          280 KDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQT  359 (488)
Q Consensus       280 ~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~  359 (488)
                               +.+++++++|+||+.+.||+      +..+.++.    ++++|+|+|+|+ . .-..+.++|+|+|+++++
T Consensus       218 ---------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~----~~~~l~ivG~g~-~-~~~~l~~~V~f~G~~~~~  276 (406)
T 2hy7_A          218 ---------PYAEGIHAVAVGSMLFDPEF------FVVASKAF----PQVTFHVIGSGM-G-RHPGYGDNVIVYGEMKHA  276 (406)
T ss_dssp             ---------SCCSSEEEEEECCTTBCHHH------HHHHHHHC----TTEEEEEESCSS-C-CCTTCCTTEEEECCCCHH
T ss_pred             ---------ccCCCcEEEEEeccccccCH------HHHHHHhC----CCeEEEEEeCch-H-HhcCCCCCEEEcCCCCHH
Confidence                     12233789999999999998      44445556    899999999987 1 111356899999999999


Q ss_pred             HHHHHHHhcCEEEeCCCCCCCCChHHHHHH-------HcCCcEEEeCCCCcccceeecCCceeE-eCC-CHHHHHHHHHH
Q 011355          360 RLAMFYNAIDIFVNPTLRAQGLDHTVLEAM-------LSGKPLMATRLASIVGSVIVGTDMGYL-FSP-QVESVKKALYG  430 (488)
Q Consensus       360 ~l~~~~~~adv~v~ps~~~eg~~~~~lEAm-------a~G~PVI~~~~~~~~~e~v~~~~~g~l-~~~-d~~~la~~i~~  430 (488)
                      ++.++|++||++|+||. .||||++++|||       +||+|||+|+.       +.++.+|++ +++ |+++++++|.+
T Consensus       277 ~l~~~~~~adv~v~ps~-~E~~~~~~lEAm~Kl~eYla~G~PVIas~~-------v~~~~~G~l~v~~~d~~~la~ai~~  348 (406)
T 2hy7_A          277 QTIGYIKHARFGIAPYA-SEQVPVYLADSSMKLLQYDFFGLPAVCPNA-------VVGPYKSRFGYTPGNADSVIAAITQ  348 (406)
T ss_dssp             HHHHHHHTCSEEECCBS-CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG-------GTCSCSSEEEECTTCHHHHHHHHHH
T ss_pred             HHHHHHHhcCEEEECCC-cccCchHHHHHHHHHHHHhhCCCcEEEehh-------cccCcceEEEeCCCCHHHHHHHHHH
Confidence            99999999999999997 599999999999       99999999987       455788999 999 99999999999


Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHH--HHHhhc
Q 011355          431 IWADGREVLEKKGLVARKRGLNLFTATKMAAAYERL--FLCISN  472 (488)
Q Consensus       431 ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~--~~~~~~  472 (488)
                      ++++ ++         + ...++|+|+.+++++.++  |+++.-
T Consensus       349 ll~~-~~---------~-~~~~~~sw~~~a~~~~~~~~y~~~~~  381 (406)
T 2hy7_A          349 ALEA-PR---------V-RYRQCLNWSDTTDRVLDPRAYPETRL  381 (406)
T ss_dssp             HHHC-CC---------C-CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred             HHhC-cc---------h-hhhhcCCHHHHHHHHHHhhcccccCc
Confidence            9998 44         1 334679999999999999  877554

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=100.00  E-value=1.5e-33  Score=274.00  Aligned_cols=346  Identities=15%  Similarity=0.093  Sum_probs=231.9

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-C-CeEEEEecCCCCCCCCC----CCCce-EEEecCCCCccCcch
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKR-G-HELHIFTASCLNCSFPT----YPISS-LYFHLSKPTAAGYLD  147 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G-~~V~v~~~~~~~~~~~~----~~~~~-i~~~~~~~~~~~~~~  147 (488)
                      ++|||++++..+|       ....+..++++|.++ | |+|.+++..........    .+... +.+....+.......
T Consensus         7 ~~mkIl~v~~~~~-------~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (375)
T 3beo_A            7 ERLKVMTIFGTRP-------EAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDI   79 (375)
T ss_dssp             SCEEEEEEECSHH-------HHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHH
T ss_pred             cCceEEEEecCcH-------HHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHH
Confidence            4599999985321       112345788888876 4 88877765432210000    01111 111111110001111


Q ss_pred             hHHHHHHHHHHhcCCCCCcEEEeCCcc---hH---HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHH
Q 011355          148 QSIVWQQLQTQNSTGKPFDVIHTESVG---LR---HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAER  221 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Dvv~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      .......+.+..++. +||+||+|+..   +.   .....++| ++.+.|+....   .         ....+...+.+.
T Consensus        80 ~~~~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~~~~~~ip-~v~~~~~~~~~---~---------~~~~~~~~~~~~  145 (375)
T 3beo_A           80 TTRGLEGLDKVMKEA-KPDIVLVHGDTTTTFIASLAAFYNQIP-VGHVEAGLRTW---D---------KYSPYPEEMNRQ  145 (375)
T ss_dssp             HHHHHHHHHHHHHHH-CCSEEEEETTSHHHHHHHHHHHHTTCC-EEEESCCCCCS---C---------TTSSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHh-CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEecccccc---c---------ccCCChhHhhhh
Confidence            122222333333333 89999998632   11   11234567 77776664110   0         000111111111


Q ss_pred             HHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCC-ccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEe
Q 011355          222 ASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNG-VDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG  300 (488)
Q Consensus       222 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  300 (488)
                      +        ..+.+|.++++|+..++.+.+ +|++++++.+++|| +|...+.+.......+++++  + +++++++++|
T Consensus       146 ~--------~~~~~d~ii~~s~~~~~~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~-~~~~vl~~~g  213 (375)
T 3beo_A          146 L--------TGVMADLHFSPTAKSATNLQK-ENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--G-NNRLVLMTAH  213 (375)
T ss_dssp             H--------HHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--T-TSEEEEEECC
T ss_pred             H--------HhhhhheeeCCCHHHHHHHHH-cCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--c-CCCeEEEEec
Confidence            1        123489999999999999988 78888899999999 78655543322234455555  2 3447788999


Q ss_pred             eeccc-cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch---hHHhhh-C--CcEEEeCccCHHHHHHHHHhcCEEEe
Q 011355          301 RLVKD-KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG---ARYRDL-G--TNVIVLGPLDQTRLAMFYNAIDIFVN  373 (488)
Q Consensus       301 rl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~---~~~~~l-~--~~V~~~g~v~~~~l~~~~~~adv~v~  373 (488)
                      |+.+. ||++.+++|+..+.++.    |++++++ |.|+..   +.++++ .  ++|+|+|+++.+++..+|+.||++|+
T Consensus       214 r~~~~~K~~~~li~a~~~l~~~~----~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~  288 (375)
T 3beo_A          214 RRENLGEPMRNMFRAIKRLVDKH----EDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLT  288 (375)
T ss_dssp             CGGGTTHHHHHHHHHHHHHHHHC----TTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEE
T ss_pred             ccccchhHHHHHHHHHHHHHhhC----CCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEE
Confidence            99875 99999999999998887    8898654 666542   333333 3  79999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEEeC-CCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 011355          374 PTLRAQGLDHTVLEAMLSGKPLMATR-LASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLN  452 (488)
Q Consensus       374 ps~~~eg~~~~~lEAma~G~PVI~~~-~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~  452 (488)
                      ||      |.+++|||++|+|||+++ .++.+ +++.++ +|+++++|+++++++|.++++| ++.+++|+++++++. +
T Consensus       289 ~s------g~~~lEA~a~G~Pvi~~~~~~~~~-e~v~~g-~g~~v~~d~~~la~~i~~ll~~-~~~~~~~~~~~~~~~-~  358 (375)
T 3beo_A          289 DS------GGVQEEAPSLGVPVLVLRDTTERP-EGIEAG-TLKLAGTDEETIFSLADELLSD-KEAHDKMSKASNPYG-D  358 (375)
T ss_dssp             CC------HHHHHHHHHHTCCEEECSSCCSCH-HHHHTT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHCCCCCTTC-C
T ss_pred             CC------CChHHHHHhcCCCEEEecCCCCCc-eeecCC-ceEEcCCCHHHHHHHHHHHHhC-hHhHhhhhhcCCCCC-C
Confidence            98      557999999999999996 48877 777766 9999977999999999999998 999999999998876 5


Q ss_pred             hCCHHHHHHHHHHHHH
Q 011355          453 LFTATKMAAAYERLFL  468 (488)
Q Consensus       453 ~fs~~~~~~~~~~~~~  468 (488)
                      .|+|+.+++.+.++++
T Consensus       359 ~~~~~~i~~~~~~~~~  374 (375)
T 3beo_A          359 GRASERIVEAILKHFN  374 (375)
T ss_dssp             SCHHHHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHHHHhh
Confidence            6999999999988763

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=100.00  E-value=7.4e-34  Score=277.09  Aligned_cols=352  Identities=13%  Similarity=0.148  Sum_probs=239.2

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCC-eEEEEecCCCCCCCCC----CCCce-EEEecCCCCccCcch-hH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGH-ELHIFTASCLNCSFPT----YPISS-LYFHLSKPTAAGYLD-QS  149 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~----~~~~~-i~~~~~~~~~~~~~~-~~  149 (488)
                      |||++++..      ..+ ...+..++++|.++|+ ++.++...........    .+... ..+..... ...... ..
T Consensus         1 mkIl~v~~~------~~~-~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   72 (384)
T 1vgv_A            1 MKVLTVFGT------RPE-AIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQP-GQGLTEITC   72 (384)
T ss_dssp             CEEEEEECS------HHH-HHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCST-TSCHHHHHH
T ss_pred             CeEEEEecc------cHH-HHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCC-CccHHHHHH
Confidence            899999852      122 2346789999999984 8877655432211000    11111 11111110 011111 12


Q ss_pred             HHHHHHHHHhcCCCCCcEEEeCCc---chH---HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHH
Q 011355          150 IVWQQLQTQNSTGKPFDVIHTESV---GLR---HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERAS  223 (488)
Q Consensus       150 ~~~~~~~~~~~~~~~~Dvv~~~~~---~~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      .....+.+..++. +||+||+|+.   .+.   .....++| ++.+.|+......            ...+....    .
T Consensus        73 ~~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~~~~------------~~~~~~~~----~  134 (384)
T 1vgv_A           73 RILEGLKPILAEF-KPDVVLVHGDTTTTLATSLAAFYQRIP-VGHVEAGLRTGDL------------YSPWPEEA----N  134 (384)
T ss_dssp             HHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHHTTTCC-EEEESCCCCCSCT------------TSSTTHHH----H
T ss_pred             HHHHHHHHHHHHh-CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEecccccccc------------cCCCchHh----h
Confidence            2223333333333 8999999853   122   12234567 8888887531100            00010111    1


Q ss_pred             HHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCc-cCCCcCCCc-----ccchhhhhhhC-CCCCCcEEE
Q 011355          224 KVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGV-DEEVFKPDV-----AMGKDFKKKFG-IPENRSLVL  296 (488)
Q Consensus       224 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngv-d~~~~~~~~-----~~~~~~r~~~~-i~~~~~~~i  296 (488)
                      +.    ...+.+|.++++|+..++.+.+ +|++++++.+++||+ |...+....     ..+..+++++| +++++++++
T Consensus       135 ~~----~~~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl  209 (384)
T 1vgv_A          135 RT----LTGHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMIL  209 (384)
T ss_dssp             HH----HHHTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEE
T ss_pred             HH----HHHhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEE
Confidence            11    1135699999999999999987 798888999999995 432221110     01125677888 766565788


Q ss_pred             EEEeeeccc-cChHHHHHHHHHhHhhccCCCCCeEEEEE-eCCC-chhHHhhh---CCcEEEeCccCHHHHHHHHHhcCE
Q 011355          297 GMAGRLVKD-KGHPLMFEALKQLLAENDTFRRSTVFLVA-GDGP-WGARYRDL---GTNVIVLGPLDQTRLAMFYNAIDI  370 (488)
Q Consensus       297 ~~~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~g~-~~~~~~~l---~~~V~~~g~v~~~~l~~~~~~adv  370 (488)
                      +++||+.+. ||++.+++|+..+.++.    |+++++++ |.++ ..+.++++   .++|+|+|+++.+++.++|+.||+
T Consensus       210 ~~~gr~~~~~kg~~~li~a~~~l~~~~----~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~  285 (384)
T 1vgv_A          210 VTGHRRESFGRGFEEICHALADIATTH----QDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL  285 (384)
T ss_dssp             EECCCBSSCCHHHHHHHHHHHHHHHHC----TTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred             EEeCCccccchHHHHHHHHHHHHHhhC----CCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE
Confidence            899999876 99999999999998888    89999886 5443 34455443   268999999988999999999999


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEEeCC-CCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011355          371 FVNPTLRAQGLDHTVLEAMLSGKPLMATRL-ASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKR  449 (488)
Q Consensus       371 ~v~ps~~~eg~~~~~lEAma~G~PVI~~~~-~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~  449 (488)
                      +|+||      |.+++|||++|+|||+++. ++.. +++.++ +|+++++|+++++++|.++++| ++.+++|+++++++
T Consensus       286 ~v~~S------g~~~lEA~a~G~PvI~~~~~~~~~-e~v~~g-~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~~~~  356 (384)
T 1vgv_A          286 ILTDS------GGIQEEAPSLGKPVLVMRDTTERP-EAVTAG-TVRLVGTDKQRIVEEVTRLLKD-ENEYQAMSRAHNPY  356 (384)
T ss_dssp             EEESS------STGGGTGGGGTCCEEEESSCCSCH-HHHHHT-SEEEECSSHHHHHHHHHHHHHC-HHHHHHHHSSCCTT
T ss_pred             EEECC------cchHHHHHHcCCCEEEccCCCCcc-hhhhCC-ceEEeCCCHHHHHHHHHHHHhC-hHHHhhhhhccCCC
Confidence            99998      2348999999999999987 7876 777777 9999977999999999999998 99999999999887


Q ss_pred             HhhhCCHHHHHHHHHHHHHHhhcc
Q 011355          450 GLNLFTATKMAAAYERLFLCISND  473 (488)
Q Consensus       450 ~~~~fs~~~~~~~~~~~~~~~~~~  473 (488)
                      . +.|+|+.+++.+.++|++..+.
T Consensus       357 ~-~~~~~~~i~~~~~~~~~~~~~~  379 (384)
T 1vgv_A          357 G-DGQACSRILEALKNNRISLGSH  379 (384)
T ss_dssp             C-CSCHHHHHHHHHHHTCCCC---
T ss_pred             c-CCCHHHHHHHHHHHHHHhhccc
Confidence            6 5699999999999988877663

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=100.00  E-value=2e-32  Score=264.87  Aligned_cols=326  Identities=17%  Similarity=0.127  Sum_probs=227.8

Q ss_pred             ceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC--CCCCCceEEEecCCCCccC-------cc
Q 011355           76 LLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSF--PTYPISSLYFHLSKPTAAG-------YL  146 (488)
Q Consensus        76 ~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~-------~~  146 (488)
                      +|||++++.      ..||.+..+..++++|.++||+|++++........  ...+.+...+.........       ..
T Consensus         6 ~mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   79 (364)
T 1f0k_A            6 GKRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPL   79 (364)
T ss_dssp             -CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHH
T ss_pred             CcEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHH
Confidence            489999984      45799999999999999999999999986532110  0012222222111100000       11


Q ss_pred             hhHHHHHHHHHHhcCCCCCcEEEeCCcc--hHH---hhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHH
Q 011355          147 DQSIVWQQLQTQNSTGKPFDVIHTESVG--LRH---TRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAER  221 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Dvv~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      .....+..+....++. +||+||+++..  ...   ....++| ++.+.|+....                    .    
T Consensus        80 ~~~~~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~~~--------------------~----  133 (364)
T 1f0k_A           80 RIFNAWRQARAIMKAY-KPDVVLGMGGYVSGPGGLAAWSLGIP-VVLHEQNGIAG--------------------L----  133 (364)
T ss_dssp             HHHHHHHHHHHHHHHH-CCSEEEECSSTTHHHHHHHHHHTTCC-EEEEECSSSCC--------------------H----
T ss_pred             HHHHHHHHHHHHHHhc-CCCEEEEeCCcCchHHHHHHHHcCCC-EEEEecCCCCc--------------------H----
Confidence            1111222333333333 89999999642  221   2234567 88888874210                    0    


Q ss_pred             HHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEee
Q 011355          222 ASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR  301 (488)
Q Consensus       222 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  301 (488)
                      ..+     ...+.+|.+++.++..       +  +  ++.+++||+|.+.+.+.     ..+++++++++++.++++.|+
T Consensus       134 ~~~-----~~~~~~d~v~~~~~~~-------~--~--~~~~i~n~v~~~~~~~~-----~~~~~~~~~~~~~~il~~~g~  192 (364)
T 1f0k_A          134 TNK-----WLAKIATKVMQAFPGA-------F--P--NAEVVGNPVRTDVLALP-----LPQQRLAGREGPVRVLVVGGS  192 (364)
T ss_dssp             HHH-----HHTTTCSEEEESSTTS-------S--S--SCEECCCCCCHHHHTSC-----CHHHHHTTCCSSEEEEEECTT
T ss_pred             HHH-----HHHHhCCEEEecChhh-------c--C--CceEeCCccchhhcccc-----hhhhhcccCCCCcEEEEEcCc
Confidence            011     2356789999988764       2  2  57899999987665432     124667777776556667789


Q ss_pred             eccccChHHHHHHHHHhHhhccCCCCCeE-EEEEeCCCchhHHh----hhC-CcEEEeCccCHHHHHHHHHhcCEEEeCC
Q 011355          302 LVKDKGHPLMFEALKQLLAENDTFRRSTV-FLVAGDGPWGARYR----DLG-TNVIVLGPLDQTRLAMFYNAIDIFVNPT  375 (488)
Q Consensus       302 l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~-l~ivG~g~~~~~~~----~l~-~~V~~~g~v~~~~l~~~~~~adv~v~ps  375 (488)
                      +.+.||.+.+++|+..+.+       +++ ++++|+|+. +.++    +++ ++|.|.|++  +++.++|+.||++|+||
T Consensus       193 ~~~~k~~~~li~a~~~l~~-------~~~~l~i~G~~~~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s  262 (364)
T 1f0k_A          193 QGARILNQTMPQVAAKLGD-------SVTIWHQSGKGSQ-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVCRS  262 (364)
T ss_dssp             TCCHHHHHHHHHHHHHHGG-------GEEEEEECCTTCH-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEECC
T ss_pred             hHhHHHHHHHHHHHHHhcC-------CcEEEEEcCCchH-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEECC
Confidence            9999999999999999853       467 577898874 3333    233 589999998  59999999999999998


Q ss_pred             CCCCCCChHHHHHHHcCCcEEEeCCCCccc------ceeecCCceeEeCC-C--HHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011355          376 LRAQGLDHTVLEAMLSGKPLMATRLASIVG------SVIVGTDMGYLFSP-Q--VESVKKALYGIWADGREVLEKKGLVA  446 (488)
Q Consensus       376 ~~~eg~~~~~lEAma~G~PVI~~~~~~~~~------e~v~~~~~g~l~~~-d--~~~la~~i~~ll~~~~~~~~~~~~~a  446 (488)
                          | |++++|||++|+|||+++.+|.++      +.+.+.+.|+++++ |  +++++++|.++  | ++.+++|++++
T Consensus       263 ----g-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~-~~~~~~~~~~~  334 (364)
T 1f0k_A          263 ----G-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--S-RETLLTMAERA  334 (364)
T ss_dssp             ----C-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--C-HHHHHHHHHHH
T ss_pred             ----c-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--C-HHHHHHHHHHH
Confidence                2 899999999999999999998642      13445556999998 7  99999999998  6 89999999999


Q ss_pred             HHHHhhhCCHHHHHHHHHHHHHHhhcc
Q 011355          447 RKRGLNLFTATKMAAAYERLFLCISND  473 (488)
Q Consensus       447 ~~~~~~~fs~~~~~~~~~~~~~~~~~~  473 (488)
                      ++.+. .|+|+.++++++++|++.-.+
T Consensus       335 ~~~~~-~~~~~~~~~~~~~~y~~~~~~  360 (364)
T 1f0k_A          335 RAASI-PDATERVANEVSRVARALEHH  360 (364)
T ss_dssp             HHTCC-TTHHHHHHHHHHHHHTTC---
T ss_pred             HHhhc-cCHHHHHHHHHHHHHHHHHhh
Confidence            99875 699999999999999875443

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.97  E-value=1.1e-29  Score=250.90  Aligned_cols=276  Identities=14%  Similarity=0.086  Sum_probs=200.9

Q ss_pred             CCcEEEeCCcc---hHHhhhc---cCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccE
Q 011355          164 PFDVIHTESVG---LRHTRAR---NLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAH  237 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~---~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  237 (488)
                      ++|+||+|++.   ++..+..   ..| ++.++|......   ..+.   ..+   ....+.          +.+-.+|.
T Consensus       123 ~~DiV~vHdyhl~~l~~~lr~~~~~~~-i~~~~H~pfp~~---~~~~---~lp---~~~~il----------~~ll~~d~  182 (482)
T 1uqt_A          123 DDDIIWIHDYHLLPFAHELRKRGVNNR-IGFFLHIPFPTP---EIFN---ALP---TYDTLL----------EQLCDYDL  182 (482)
T ss_dssp             TTCEEEEESGGGTTHHHHHHHTTCCSC-EEEECCSCCCCH---HHHT---TST---THHHHH----------HHHTTSSE
T ss_pred             CCCEEEEECchHHHHHHHHHHhCCCCc-EEEEEcCCCCCH---HHHh---hCc---cHHHHH----------HhhhccCe
Confidence            67999999753   3333332   356 899999853211   1100   001   101111          12234566


Q ss_pred             EEEcChhhHHHHHH-----------------HhcCCCCcEEEecCCccCCCcCCCccc-----chhhhhhhCCCCCCcEE
Q 011355          238 HVATSDHCGDVLKR-----------------IYMIPEERVHVILNGVDEEVFKPDVAM-----GKDFKKKFGIPENRSLV  295 (488)
Q Consensus       238 ii~~S~~~~~~~~~-----------------~~g~~~~~i~vi~ngvd~~~~~~~~~~-----~~~~r~~~~i~~~~~~~  295 (488)
                      +...+....+.+..                 .+| ...++.++|||||.+.|.+....     ...+|++++   ++ .+
T Consensus       183 i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g-~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~-~v  257 (482)
T 1uqt_A          183 LGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWG-KAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NV-QN  257 (482)
T ss_dssp             EEESSHHHHHHHHHHHHHHSCEEEETTTEEEETT-EEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TC-EE
T ss_pred             EEEECHHHHHHHHHHHHHHhCCccccCCeEEECC-eEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CC-EE
Confidence            66665554444432                 122 24579999999998877542111     356788886   44 68


Q ss_pred             EEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCC-----Cc----hhHHhhhC------------CcEEE-e
Q 011355          296 LGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDG-----PW----GARYRDLG------------TNVIV-L  353 (488)
Q Consensus       296 i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g-----~~----~~~~~~l~------------~~V~~-~  353 (488)
                      |+++||+++.||++.+++|++.+.+++++++.+++|+++|.+     +.    .++++++.            ..|++ .
T Consensus       258 il~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~  337 (482)
T 1uqt_A          258 IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLN  337 (482)
T ss_dssp             EEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEEC
T ss_pred             EEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeC
Confidence            889999999999999999999999888433345889999952     21    12222221            13664 6


Q ss_pred             CccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCC-----cEEEeCCCCcccceeecCCceeEeCC-CHHHHHHH
Q 011355          354 GPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGK-----PLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKA  427 (488)
Q Consensus       354 g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~-----PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~  427 (488)
                      |.++.+++..+|+.||++|+||.+ ||||++++||||||+     |||+|+.+|.. +.+   .+|++++| |+++++++
T Consensus       338 g~v~~~el~~ly~~ADv~v~pS~~-EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~-~~l---~~g~lv~p~d~~~lA~a  412 (482)
T 1uqt_A          338 QHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-NEL---TSALIVNPYDRDEVAAA  412 (482)
T ss_dssp             SCCCHHHHHHHHHHCSEEEECCSS-BSCCHHHHHHHHHSCTTSCCEEEEETTBGGG-GTC---TTSEEECTTCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHccEEEECCCc-ccCCchHHHHHHhCCCCCCCCEEEECCCCCH-HHh---CCeEEECCCCHHHHHHH
Confidence            899999999999999999999985 999999999999997     99999988877 444   37999999 99999999


Q ss_pred             HHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Q 011355          428 LYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCI  470 (488)
Q Consensus       428 i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~  470 (488)
                      |.+++++++++++++++++++.+.+ |||+.+++++.+.|+++
T Consensus       413 i~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~a~~~l~~l~~~  454 (482)
T 1uqt_A          413 LDRALTMSLAERISRHAEMLDVIVK-NDINHWQECFISDLKQI  454 (482)
T ss_dssp             HHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHS
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHhc
Confidence            9999997678899999999999976 89999999999999887

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.97  E-value=1.2e-29  Score=223.73  Aligned_cols=182  Identities=24%  Similarity=0.356  Sum_probs=159.4

Q ss_pred             ecCCccCCCcC--CCcc----cchhhhhhhCCCCCCcEEEEEEeeec-cccChHHHHHHHHHhH--hhccCCCCCeEEEE
Q 011355          263 ILNGVDEEVFK--PDVA----MGKDFKKKFGIPENRSLVLGMAGRLV-KDKGHPLMFEALKQLL--AENDTFRRSTVFLV  333 (488)
Q Consensus       263 i~ngvd~~~~~--~~~~----~~~~~r~~~~i~~~~~~~i~~~Grl~-~~Kg~~~ll~a~~~l~--~~~~~~~~~~~l~i  333 (488)
                      ||||+|.+.|.  +...    .+..+|++++++++  .+++++|++. +.||++.+++++..+.  ++.    ++++|+|
T Consensus         2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~--~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~----~~~~l~i   75 (200)
T 2bfw_A            2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF----QEMRFII   75 (200)
T ss_dssp             ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG----GGEEEEE
T ss_pred             CCCccChhhccccccccchhhHHHHHHHHcCCCCC--CEEEEeeccccccCCHHHHHHHHHHHHhhccC----CCeEEEE
Confidence            68999999987  5431    15678999998754  4888999999 9999999999999998  777    8999999


Q ss_pred             EeCCC--chhHHhhhC---CcEEE-eCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccce
Q 011355          334 AGDGP--WGARYRDLG---TNVIV-LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSV  407 (488)
Q Consensus       334 vG~g~--~~~~~~~l~---~~V~~-~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~  407 (488)
                      +|.++  ..+.++++.   .+|++ .|+++.+++..+|+.||++|+||.. |++|++++|||++|+|||+++.++.. ++
T Consensus        76 ~G~~~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~-e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~  153 (200)
T 2bfw_A           76 IGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DI  153 (200)
T ss_dssp             ECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSC-CSSCHHHHHHHHTTCEEEEESCHHHH-HH
T ss_pred             ECCCChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCC-CCccHHHHHHHHCCCCEEEeCCCChH-HH
Confidence            99988  555555421   28999 9999999999999999999999975 99999999999999999999999988 88


Q ss_pred             eecCCceeEeCC-CHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHhhhCC
Q 011355          408 IVGTDMGYLFSP-QVESVKKALYGIWA-DGREVLEKKGLVARKRGLNLFT  455 (488)
Q Consensus       408 v~~~~~g~l~~~-d~~~la~~i~~ll~-~~~~~~~~~~~~a~~~~~~~fs  455 (488)
                      + ++.+|+++++ |+++++++|.++++ + ++.+++|++++++++.+ ||
T Consensus       154 ~-~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~a~~~~~~-fs  200 (200)
T 2bfw_A          154 I-TNETGILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMS-FS  200 (200)
T ss_dssp             C-CTTTCEEECTTCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH-TC
T ss_pred             c-CCCceEEecCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHh-cC
Confidence            8 8999999998 99999999999999 8 99999999999999988 86

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.97  E-value=7.8e-29  Score=245.07  Aligned_cols=302  Identities=15%  Similarity=0.104  Sum_probs=199.8

Q ss_pred             CCcEEEeCCcc---hHHhhhc---cCCcEEEeeeCCcchhh---hh--hhhHhhhcCCCChhHHHHHHHHHHHHHHhhhc
Q 011355          164 PFDVIHTESVG---LRHTRAR---NLTNVVVSWHGIAYETI---HS--DIIQELLRTPEEPQAYALAERASKVVEEVKFF  232 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~---~~p~~v~~~h~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (488)
                      +|||+|+|.+.   .+.+++.   .++ .+.++|.......   ..  ++...+ ..-.......-.........+....
T Consensus       181 ~pdIiH~HDW~tg~~~~~Lk~~~~~i~-tVfTiH~telGR~lagqg~~~~y~~L-~~~~~d~ea~~~~i~~~~~~EKaga  258 (725)
T 3nb0_A          181 HAIVAHFHEWLAGVALPLCRKRRIDVV-TIFTTHATLLGRYLCASGSFDFYNCL-ESVDVDHEAGRFGIYHRYCIERAAA  258 (725)
T ss_dssp             EEEEEEEESGGGCTHHHHHHHTTCSCE-EEEEESSCHHHHHHTSSSCSCHHHHG-GGCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CCcEEEeCchhhhHHHHHHHHhCCCCC-EEEEEecchhhhhhhhcCCCchhhhh-hhcCCChhhhhhchhHHHHHHHHHH
Confidence            69999999742   2333322   345 9999998742211   01  111111 1000000000000111222233456


Q ss_pred             CCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcc---cchhhhhh------------hCCCCCCcEEEE
Q 011355          233 PKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVA---MGKDFKKK------------FGIPENRSLVLG  297 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~---~~~~~r~~------------~~i~~~~~~~i~  297 (488)
                      ..||.|+++|+..++.+...++.+++.+  ||||+|.+.|.+...   .+...|++            ++++.++.+++.
T Consensus       259 ~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liif  336 (725)
T 3nb0_A          259 HSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFF  336 (725)
T ss_dssp             HHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEE
T ss_pred             HhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEE
Confidence            7899999999999999999888776655  999999999877421   11122222            256555657777


Q ss_pred             EEeeec-cccChHHHHHHHHHhHhh---ccCCCCCeEEEEEeCCCch---------------------------------
Q 011355          298 MAGRLV-KDKGHPLMFEALKQLLAE---NDTFRRSTVFLVAGDGPWG---------------------------------  340 (488)
Q Consensus       298 ~~Grl~-~~Kg~~~ll~a~~~l~~~---~~~~~~~~~l~ivG~g~~~---------------------------------  340 (488)
                      .+||+. .+||++.+++|+.++...   ...-+.-+.|+|++.+...                                 
T Consensus       337 ivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~  416 (725)
T 3nb0_A          337 IAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDH  416 (725)
T ss_dssp             EESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHH
Confidence            799999 789999999999988743   1000023667777653110                                 


Q ss_pred             ------------------------hH--Hh----------------------------------h--hCCc------EEE
Q 011355          341 ------------------------AR--YR----------------------------------D--LGTN------VIV  352 (488)
Q Consensus       341 ------------------------~~--~~----------------------------------~--l~~~------V~~  352 (488)
                                              +.  ++                                  .  +.++      |+|
T Consensus       417 ~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf  496 (725)
T 3nb0_A          417 AIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIF  496 (725)
T ss_dssp             HHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEE
T ss_pred             HhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEE
Confidence                                    00  01                                  0  1122      555


Q ss_pred             e-CccCHH------HHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecC-------CceeEeC
Q 011355          353 L-GPLDQT------RLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGT-------DMGYLFS  418 (488)
Q Consensus       353 ~-g~v~~~------~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~-------~~g~l~~  418 (488)
                      . ++++.+      ++.++|+.||++|+||.+ ||||++++||||||+|||+|+.+|.. +.+.++       .+|+++.
T Consensus       497 ~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~-EgfGl~~LEAmA~G~PvI~s~~gG~~-d~V~dg~~~~~~~~tG~lV~  574 (725)
T 3nb0_A          497 HPEFLNANNPILGLDYDEFVRGCHLGVFPSYY-EPWGYTPAECTVMGVPSITTNVSGFG-SYMEDLIETNQAKDYGIYIV  574 (725)
T ss_dssp             CCSCCCTTCSSSCCCHHHHHHHCSEEECCCSS-BSSCHHHHHHHHTTCCEEEETTBHHH-HHHHTTSCHHHHHHTTEEEE
T ss_pred             eccccCCCCccchhHHHHHHhhceEEEecccc-CCCCHHHHHHHHcCCCEEEeCCCChh-hhhhccccccCCCCceEEEe
Confidence            5 567655      589999999999999975 99999999999999999999999988 777665       3698883


Q ss_pred             ---C-CHHHHHHHH----HHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhc
Q 011355          419 ---P-QVESVKKAL----YGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISN  472 (488)
Q Consensus       419 ---~-d~~~la~~i----~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~  472 (488)
                         + |+++++++|    ..+++.+++.+..|++++++.+. .|+|++++++|.++|+.++.
T Consensus       575 ~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~-~FSWe~iA~~Yl~~Ye~aL~  635 (725)
T 3nb0_A          575 DRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD-LLDWKRMGLEYVKARQLALR  635 (725)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG-GGBHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHh
Confidence               3 555555544    44444447888999999988875 69999999999999998774

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.96  E-value=6.5e-27  Score=227.95  Aligned_cols=280  Identities=12%  Similarity=0.050  Sum_probs=207.6

Q ss_pred             CCcEEEeCCcc---hHHhhhccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .-|+|.+|++.   ++..+....|+  +...+|..++.   .+++.    ..  +  ..+.+.+.      +.+-.+|.|
T Consensus       149 ~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs---~e~f~----~L--p--~~~r~ell------~gll~~Dli  211 (496)
T 3t5t_A          149 ADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPS---ADYWR----IL--P--KEIRTGIL------HGMLPATTI  211 (496)
T ss_dssp             SSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCC---HHHHT----TS--C--HHHHHHHH------HHHTTSSEE
T ss_pred             CCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCC---HHHHh----hC--c--HhHHHHHH------HHHHhCCEE
Confidence            57999999864   45555543332  77778865321   11111    00  0  00111111      445789999


Q ss_pred             EEcChhhHHHHHHH----h-cCC-------------CCcEEEecCCccCCCcCCCcc-cchhhhhhhCCCCCCcEEEEEE
Q 011355          239 VATSDHCGDVLKRI----Y-MIP-------------EERVHVILNGVDEEVFKPDVA-MGKDFKKKFGIPENRSLVLGMA  299 (488)
Q Consensus       239 i~~S~~~~~~~~~~----~-g~~-------------~~~i~vi~ngvd~~~~~~~~~-~~~~~r~~~~i~~~~~~~i~~~  299 (488)
                      .+.+....+.+.+.    + |.+             ..++.++|+|||.+.|.+... ....+|++++   ++ .+|+++
T Consensus       212 gF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~-~lIl~V  287 (496)
T 3t5t_A          212 GFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GH-RLVVHS  287 (496)
T ss_dssp             EESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TS-EEEEEE
T ss_pred             EEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---Cc-eEEEEc
Confidence            99999888776552    2 321             126789999999998876432 2367888887   44 678899


Q ss_pred             eeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeC-----CCchh----HHhhh----C-----CcEEEeCccCHHHH
Q 011355          300 GRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGD-----GPWGA----RYRDL----G-----TNVIVLGPLDQTRL  361 (488)
Q Consensus       300 Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~-----g~~~~----~~~~l----~-----~~V~~~g~v~~~~l  361 (488)
                      ||+++.||++.+++|+ ++.+++++++ ++.|+++|.     ++..+    +++++    .     ..|+|+|.++.+++
T Consensus       288 gRLd~~KGi~~lL~Af-~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el  365 (496)
T 3t5t_A          288 GRTDPIKNAERAVRAF-VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHT  365 (496)
T ss_dssp             EESSGGGCHHHHHHHH-HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHH
T ss_pred             ccCccccCHHHHHHHH-HHHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHH
Confidence            9999999999999999 9998884443 577888863     22222    22222    1     16999999999999


Q ss_pred             HHHHHhcCEEEeCCCCCCCCChHHHHHHHcC---CcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHH
Q 011355          362 AMFYNAIDIFVNPTLRAQGLDHTVLEAMLSG---KPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGRE  437 (488)
Q Consensus       362 ~~~~~~adv~v~ps~~~eg~~~~~lEAma~G---~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~  437 (488)
                      ..+|+.||+++.||.+ ||||++++|||+||   .|+|.|+.+|.. +.+  +.+|++++| |+++++++|.++++++++
T Consensus       366 ~aly~~ADv~vv~Slr-EGfgLv~~EamA~~~~~g~lVlSe~aGa~-~~l--~~~allVnP~D~~~lA~AI~~aL~m~~~  441 (496)
T 3t5t_A          366 IACFRRADLLIFNSTV-DGQNLSTFEAPLVNERDADVILSETCGAA-EVL--GEYCRSVNPFDLVEQAEAISAALAAGPR  441 (496)
T ss_dssp             HHHHHHCSEEEECCSS-BSCCSHHHHHHHHCSSCCEEEEETTBTTH-HHH--GGGSEEECTTBHHHHHHHHHHHHHCCHH
T ss_pred             HHHHHhccEEEECccc-ccCChhHHHHHHhCCCCCCEEEeCCCCCH-HHh--CCCEEEECCCCHHHHHHHHHHHHcCCHH
Confidence            9999999999999986 99999999999997   899999999988 444  357999999 999999999999998788


Q ss_pred             HHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Q 011355          438 VLEKKGLVARKRGLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       438 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                      +++++.++.++++.+ ++....++.+.+-+....
T Consensus       442 er~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~~~  474 (496)
T 3t5t_A          442 QRAEAAARRRDAARP-WTLEAWVQAQLDGLAADH  474 (496)
T ss_dssp             HHHHHHHHHHHHHTT-CBHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-CCHHHHHHHHHHHHhhcc
Confidence            999999999999966 799999999988887653

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.96  E-value=1.4e-27  Score=231.97  Aligned_cols=342  Identities=13%  Similarity=0.049  Sum_probs=218.7

Q ss_pred             ceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCC----CCCCCCce-EEEecCCCCccCcc-hh
Q 011355           76 LLKIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCS----FPTYPISS-LYFHLSKPTAAGYL-DQ  148 (488)
Q Consensus        76 ~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~----~~~~~~~~-i~~~~~~~~~~~~~-~~  148 (488)
                      .|||++++...|      +. .....++++|.+. ||+|.+++.......    ....+... +.+..... ..... ..
T Consensus         5 mmkIl~v~~~~~------~~-~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   76 (376)
T 1v4v_A            5 MKRVVLAFGTRP------EA-TKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQE-RQALPDLA   76 (376)
T ss_dssp             CEEEEEEECSHH------HH-HHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSS-CCCHHHHH
T ss_pred             ceEEEEEEeccH------HH-HHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCC-CccHHHHH
Confidence            389999986321      11 2245789999988 799887765431110    00011111 11111110 00111 11


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEeCCcc---hH---HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          149 SIVWQQLQTQNSTGKPFDVIHTESVG---LR---HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Dvv~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ......+.+..++. +||+||+|+..   +.   .....++| ++...++.....          .+  .++.....+  
T Consensus        77 ~~~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~~~----------~~--~~~~~~~~~--  140 (376)
T 1v4v_A           77 ARILPQAARALKEM-GADYVLVHGDTLTTFAVAWAAFLEGIP-VGHVEAGLRSGN----------LK--EPFPEEANR--  140 (376)
T ss_dssp             HHHHHHHHHHHHHT-TCSEEEEESSCHHHHHHHHHHHHTTCC-EEEETCCCCCSC----------TT--SSTTHHHHH--
T ss_pred             HHHHHHHHHHHHHc-CCCEEEEeCChHHHHHHHHHHHHhCCC-EEEEeCCCcccc----------cc--CCCchHHHH--
Confidence            12233333433333 89999998532   21   12234567 654433321100          00  000011111  


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCc-cCCCcCCCcccchhhhhhhCCCCCCcEEEEEEee
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGV-DEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGR  301 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  301 (488)
                       +     ...+.+|.++++|+..++.+.+ +|++++++.+++|++ |...+...   +..++++++   +++++++++||
T Consensus       141 -~-----~~~~~~~~~~~~s~~~~~~l~~-~g~~~~ki~vi~n~~~d~~~~~~~---~~~~~~~~~---~~~~vl~~~gr  207 (376)
T 1v4v_A          141 -R-----LTDVLTDLDFAPTPLAKANLLK-EGKREEGILVTGQTGVDAVLLAAK---LGRLPEGLP---EGPYVTVTMHR  207 (376)
T ss_dssp             -H-----HHHHHCSEEEESSHHHHHHHHT-TTCCGGGEEECCCHHHHHHHHHHH---HCCCCTTCC---SSCEEEECCCC
T ss_pred             -H-----HHHHHhceeeCCCHHHHHHHHH-cCCCcceEEEECCchHHHHhhhhh---hhHHHHhcC---CCCEEEEEeCc
Confidence             1     1123578999999999999988 688888999999964 43221111   112333332   33377888999


Q ss_pred             eccccChHHHHHHHHHhHhhccCCCCCeEEEEE-eCCC-chhHHhhh---CCcEEEeCccCHHHHHHHHHhcCEEEeCCC
Q 011355          302 LVKDKGHPLMFEALKQLLAENDTFRRSTVFLVA-GDGP-WGARYRDL---GTNVIVLGPLDQTRLAMFYNAIDIFVNPTL  376 (488)
Q Consensus       302 l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~g~-~~~~~~~l---~~~V~~~g~v~~~~l~~~~~~adv~v~ps~  376 (488)
                      +...||++.+++|++.+.++.    |+++++++ |+++ ..+.++++   .++|+|+|+++..++.++|+.||++|.|| 
T Consensus       208 ~~~~k~~~~ll~a~~~l~~~~----~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S-  282 (376)
T 1v4v_A          208 RENWPLLSDLAQALKRVAEAF----PHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-  282 (376)
T ss_dssp             GGGGGGHHHHHHHHHHHHHHC----TTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-
T ss_pred             ccchHHHHHHHHHHHHHHhhC----CCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC-
Confidence            988889999999999998877    88998886 7665 34555543   36899999888889999999999999998 


Q ss_pred             CCCCCChHHHHHHHcCCcEEEe-CCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCC
Q 011355          377 RAQGLDHTVLEAMLSGKPLMAT-RLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFT  455 (488)
Q Consensus       377 ~~eg~~~~~lEAma~G~PVI~~-~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs  455 (488)
                        +  |+ ++|||++|+|||++ +.++.. +++. +++|++++.|+++++++|.++++| ++.+++|++++     +.|.
T Consensus       283 --~--g~-~lEA~a~G~PvI~~~~~~~~~-~~~~-~g~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~-----~~~~  349 (376)
T 1v4v_A          283 --G--GL-QEEGAALGVPVVVLRNVTERP-EGLK-AGILKLAGTDPEGVYRVVKGLLEN-PEELSRMRKAK-----NPYG  349 (376)
T ss_dssp             --H--HH-HHHHHHTTCCEEECSSSCSCH-HHHH-HTSEEECCSCHHHHHHHHHHHHTC-HHHHHHHHHSC-----CSSC
T ss_pred             --c--CH-HHHHHHcCCCEEeccCCCcch-hhhc-CCceEECCCCHHHHHHHHHHHHhC-hHhhhhhcccC-----CCCC
Confidence              3  33 88999999999987 567776 6654 458999855999999999999998 88889888643     4466


Q ss_pred             HHHHHHHHHHHHHHhhc
Q 011355          456 ATKMAAAYERLFLCISN  472 (488)
Q Consensus       456 ~~~~~~~~~~~~~~~~~  472 (488)
                      +...++++.+.+.++++
T Consensus       350 ~~~~~~~i~~~i~~~~~  366 (376)
T 1v4v_A          350 DGKAGLMVARGVAWRLG  366 (376)
T ss_dssp             CSCHHHHHHHHHHHHTT
T ss_pred             CChHHHHHHHHHHHHhc
Confidence            66677777777777765

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.95  E-value=9.6e-28  Score=204.73  Aligned_cols=158  Identities=18%  Similarity=0.274  Sum_probs=133.7

Q ss_pred             cEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh----hCCcEEEeCccCHHHHHHHHHhc
Q 011355          293 SLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD----LGTNVIVLGPLDQTRLAMFYNAI  368 (488)
Q Consensus       293 ~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~----l~~~V~~~g~v~~~~l~~~~~~a  368 (488)
                      +++|+++|++.+.||++.+++|+..+. +.    ++++|+|+|+|+..+.+++    ++.+|.+ |+++.+++..+|+.|
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~-~~----~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~a   75 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSK-YK----QDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTC   75 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCT-TG----GGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhc-cC----CCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence            378999999999999999999999984 44    7999999999987766554    4458999 999999999999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCC-cEEE-eCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011355          369 DIFVNPTLRAQGLDHTVLEAMLSGK-PLMA-TRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGREVLEKKGLV  445 (488)
Q Consensus       369 dv~v~ps~~~eg~~~~~lEAma~G~-PVI~-~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~  445 (488)
                      |++|+||. .||||++++|||++|+ |||+ ++.++.. +++.++.+  ++++ |+++++++|.+++++ ++.+++|+++
T Consensus        76 dv~v~ps~-~e~~~~~~~Eama~G~vPvi~~~~~~~~~-~~~~~~~~--~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~  150 (166)
T 3qhp_A           76 TLYVHAAN-VESEAIACLEAISVGIVPVIANSPLSATR-QFALDERS--LFEPNNAKDLSAKIDWWLEN-KLERERMQNE  150 (166)
T ss_dssp             SEEEECCC-SCCCCHHHHHHHHTTCCEEEECCTTCGGG-GGCSSGGG--EECTTCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred             CEEEECCc-ccCccHHHHHHHhcCCCcEEeeCCCCchh-hhccCCce--EEcCCCHHHHHHHHHHHHhC-HHHHHHHHHH
Confidence            99999997 5999999999999998 9999 5677776 77766544  7777 999999999999998 9999999999


Q ss_pred             HHHHHhhhCCHHHHHHH
Q 011355          446 ARKRGLNLFTATKMAAA  462 (488)
Q Consensus       446 a~~~~~~~fs~~~~~~~  462 (488)
                      +++++ ++|+|++++++
T Consensus       151 ~~~~~-~~~s~~~~~~~  166 (166)
T 3qhp_A          151 YAKSA-LNYTLENSVIQ  166 (166)
T ss_dssp             HHHHH-HHHC-------
T ss_pred             HHHHH-HHCChhhhhcC
Confidence            99998 67999998763

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.95  E-value=2.4e-27  Score=228.92  Aligned_cols=295  Identities=12%  Similarity=0.019  Sum_probs=200.3

Q ss_pred             CCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEE--EecCCCCccCcchhHHHHHHHHHHhcCCCCCcEE
Q 011355           91 HAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLY--FHLSKPTAAGYLDQSIVWQQLQTQNSTGKPFDVI  168 (488)
Q Consensus        91 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv  168 (488)
                      ...|..+.+..|+++|.++| +|.+.+....+.........++.  ..  .+     ++....+.++.+..    +||+|
T Consensus        48 ~s~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~~~v~~~~~--~p-----~~~~~~l~~~l~~~----~pDiv  115 (374)
T 2xci_A           48 ASIGEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKSDFYDCLHP--LP-----LDNPFSVKRFEELS----KPKAL  115 (374)
T ss_dssp             SSHHHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTGGGCSEEEE--CC-----CSSHHHHHHHHHHH----CCSEE
T ss_pred             CCHHHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhcccccceeE--CC-----CCCHHHHHHHHHHh----CCCEE
Confidence            45788899999999999998 88877665432210000002222  11  11     12223334444444    89999


Q ss_pred             EeCCcch-HHhh--hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhh
Q 011355          169 HTESVGL-RHTR--ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHC  245 (488)
Q Consensus       169 ~~~~~~~-~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~  245 (488)
                      |++...+ +...  ... | ++...+...               .     +.    +.+     ..++++|.++++|+..
T Consensus       116 ~~~~~~~~~~~~~~~~~-p-~~~~~~~~~---------------~-----~~----~~~-----~~~~~~d~ii~~S~~~  164 (374)
T 2xci_A          116 IVVEREFWPSLIIFTKV-P-KILVNAYAK---------------G-----SL----IEK-----ILSKKFDLIIMRTQED  164 (374)
T ss_dssp             EEESCCCCHHHHHHCCS-C-EEEEEECCC---------------C-----CH----HHH-----HHHTTCSEEEESCHHH
T ss_pred             EEECccCcHHHHHHHhC-C-EEEEEeecC---------------c-----hH----HHH-----HHHHhCCEEEECCHHH
Confidence            9754322 1111  122 5 544433210               0     01    111     3467899999999999


Q ss_pred             HHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCC
Q 011355          246 GDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTF  325 (488)
Q Consensus       246 ~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~  325 (488)
                      ++.+.+ +|++  ++.+++|+..    .......    +.  +  .+ +++++.|+  ..||++.+++|++.+.++.   
T Consensus       165 ~~~l~~-~g~~--ki~vi~n~~f----~~~~~~~----~~--l--~~-~vi~~~~~--~~k~~~~ll~A~~~l~~~~---  223 (374)
T 2xci_A          165 VEKFKT-FGAK--RVFSCGNLKF----ICQKGKG----IK--L--KG-EFIVAGSI--HTGEVEIILKAFKEIKKTY---  223 (374)
T ss_dssp             HHHHHT-TTCC--SEEECCCGGG----CCCCCSC----CC--C--SS-CEEEEEEE--CGGGHHHHHHHHHHHHTTC---
T ss_pred             HHHHHH-cCCC--eEEEcCCCcc----CCCcChh----hh--h--cC-CEEEEEeC--CCchHHHHHHHHHHHHhhC---
Confidence            999988 6876  8999999731    1111000    11  1  12 35556665  4689999999999999888   


Q ss_pred             CCCeEEEEEeCCCch-hHHhh----hC----------CcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHH
Q 011355          326 RRSTVFLVAGDGPWG-ARYRD----LG----------TNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAML  390 (488)
Q Consensus       326 ~~~~~l~ivG~g~~~-~~~~~----l~----------~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma  390 (488)
                       |+++|+|+|+|+.+ +.+++    ++          .+|.+.|+.  +|+..+|+.||++++||...|++|++++|||+
T Consensus       224 -p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA  300 (374)
T 2xci_A          224 -SSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEPTC  300 (374)
T ss_dssp             -TTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHT
T ss_pred             -CCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHHHH
Confidence             89999999999876 34443    22          368888874  59999999999988876444778999999999


Q ss_pred             cCCcEEEe-CCCCcccceeecC-CceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCC
Q 011355          391 SGKPLMAT-RLASIVGSVIVGT-DMGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFT  455 (488)
Q Consensus       391 ~G~PVI~~-~~~~~~~e~v~~~-~~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs  455 (488)
                      ||+|||++ +.++.+ |++.+. .+|+++++ |+++|+++|.++++|  +.+++|+++++++++++++
T Consensus       301 ~G~PVI~~~~~~~~~-e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg~~ar~~~~~~~g  365 (374)
T 2xci_A          301 WGIPVIYGPYTHKVN-DLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVEEKSREIKGCYLE  365 (374)
T ss_dssp             TTCCEEECSCCTTSH-HHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHHHHHHHHHHHHHH
T ss_pred             hCCCEEECCCccChH-HHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHhccc
Confidence            99999975 777877 666542 46777777 999999999999986  7788999999999987654

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.93  E-value=1.6e-25  Score=192.79  Aligned_cols=146  Identities=19%  Similarity=0.227  Sum_probs=125.8

Q ss_pred             CCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhh--------hCCcEEEeCccCH
Q 011355          287 GIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRD--------LGTNVIVLGPLDQ  358 (488)
Q Consensus       287 ~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~--------l~~~V~~~g~v~~  358 (488)
                      .++.++ ++|+|+|++.+.||++.+++++..+        ++++|+|+|.++..+.+++        +.++|+|.|++++
T Consensus        18 ~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l--------~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~   88 (177)
T 2f9f_A           18 KFKCYG-DFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSE   88 (177)
T ss_dssp             CCCCCC-SCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCH
T ss_pred             ccCCCC-CEEEEEeccccccCHHHHHHHHHhC--------CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCH
Confidence            355565 6788999999999999999999987        6789999999876544433        3469999999999


Q ss_pred             HHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHHHHHhcCHH
Q 011355          359 TRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALYGIWADGRE  437 (488)
Q Consensus       359 ~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~~ll~~~~~  437 (488)
                      +++..+|+.||++|+||. .|++|++++|||+||+|||+++.++.. +++.++.+|+++ + |+++++++|.+++++ ++
T Consensus        89 ~e~~~~~~~adi~v~ps~-~e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~-~~d~~~l~~~i~~l~~~-~~  164 (177)
T 2f9f_A           89 EELIDLYSRCKGLLCTAK-DEDFGLTPIEAMASGKPVIAVNEGGFK-ETVINEKTGYLV-NADVNEIIDAMKKVSKN-PD  164 (177)
T ss_dssp             HHHHHHHHHCSEEEECCS-SCCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBTTTEEEE-CSCHHHHHHHHHHHHHC-TT
T ss_pred             HHHHHHHHhCCEEEeCCC-cCCCChHHHHHHHcCCcEEEeCCCCHH-HHhcCCCccEEe-CCCHHHHHHHHHHHHhC-HH
Confidence            999999999999999997 599999999999999999999999987 899999999999 6 999999999999998 55


Q ss_pred             H-HHHHHHH
Q 011355          438 V-LEKKGLV  445 (488)
Q Consensus       438 ~-~~~~~~~  445 (488)
                      . +++++++
T Consensus       165 ~~~~~~~~~  173 (177)
T 2f9f_A          165 KFKKDCFRR  173 (177)
T ss_dssp             TTHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            3 3333333

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.92  E-value=2.8e-23  Score=195.68  Aligned_cols=303  Identities=10%  Similarity=-0.041  Sum_probs=199.8

Q ss_pred             ceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHH
Q 011355           76 LLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQL  155 (488)
Q Consensus        76 ~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      -|++-+.. .|-+. ...++...-....+-+.+.|++-.-+........                   .   .......+
T Consensus        10 ~m~~~i~~-~~~~~-~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~~~-------------------~---~~~~~~~~   65 (339)
T 3rhz_A           10 CMRVYITN-INGQS-IQSTAQLCQNTVTDVAVSLGYRELGIYCYQIHTD-------------------S---ESELSKRL   65 (339)
T ss_dssp             CCCEEEEE-EESSC-TTCHHHHHHHHHHHHHHHTTCEEEEEECCCGGGS-------------------C---HHHHHHHH
T ss_pred             hhheeeec-ccCcc-ccchHHHHHHHHHHHHHHCCCeEEEeeccccccc-------------------c---HHHHHHHH
Confidence            36654444 33222 3344455555666666778997655543211000                   0   01112222


Q ss_pred             HHHhcCCCCCcEEEeCCcch-----H-Hhh----hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHH
Q 011355          156 QTQNSTGKPFDVIHTESVGL-----R-HTR----ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKV  225 (488)
Q Consensus       156 ~~~~~~~~~~Dvv~~~~~~~-----~-~~~----~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      .......+++|+|+++++.+     . .++    ..+.| ++..+||+++.....           ...   ..      
T Consensus        66 ~~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k-~i~~ihDl~pl~~~~-----------~~~---~~------  124 (339)
T 3rhz_A           66 DGIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIK-IVLFIHDVVPLMFSG-----------NFY---LM------  124 (339)
T ss_dssp             HHHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCE-EEEEESCCHHHHCGG-----------GGG---GH------
T ss_pred             HHHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCE-EEEEecccHHhhCcc-----------chh---hH------
Confidence            23333444899999976432     1 111    12456 999999986643211           000   00      


Q ss_pred             HHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccc
Q 011355          226 VEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKD  305 (488)
Q Consensus       226 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~  305 (488)
                      ..+...++++|.|+++|+.+++.+.+ .|++..++.++++. |...  ..+.         ..+.++ ++++|+|++...
T Consensus       125 ~~E~~~y~~aD~Ii~~S~~~~~~l~~-~G~~~~ki~~~~~~-~~~~--~~~~---------~~~~~~-~~i~yaG~l~k~  190 (339)
T 3rhz_A          125 DRTIAYYNKADVVVAPSQKMIDKLRD-FGMNVSKTVVQGMW-DHPT--QAPM---------FPAGLK-REIHFPGNPERF  190 (339)
T ss_dssp             HHHHHHHTTCSEEEESCHHHHHHHHH-TTCCCSEEEECCSC-CCCC--CCCC---------CCCEEE-EEEEECSCTTTC
T ss_pred             HHHHHHHHHCCEEEECCHHHHHHHHH-cCCCcCceeecCCC-CccC--cccc---------cccCCC-cEEEEeCCcchh
Confidence            12446789999999999999999998 79877787655542 2211  1000         112223 789999999853


Q ss_pred             cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCC------CC
Q 011355          306 KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLR------AQ  379 (488)
Q Consensus       306 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~------~e  379 (488)
                      ..+.    .   +   .    ++++|+|+|+|+..    ++. ||+|+|+++.+++..+|+++|+.+.....      ..
T Consensus       191 ~~L~----~---l---~----~~~~f~ivG~G~~~----~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~  251 (339)
T 3rhz_A          191 SFVK----E---W---K----YDIPLKVYTWQNVE----LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSL  251 (339)
T ss_dssp             GGGG----G---C---C----CSSCEEEEESCCCC----CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTT
T ss_pred             hHHH----h---C---C----CCCeEEEEeCCccc----CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHh
Confidence            3221    1   1   3    78999999999875    355 99999999999999999999997775210      13


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKM  459 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~  459 (488)
                      ++|++++||||||+|||+++.++.. +++.++++|+.++ +.++++++|..+.   ++.+++|++++++.+.+ +++..+
T Consensus       252 ~~P~Kl~eymA~G~PVI~~~~~~~~-~~v~~~~~G~~~~-~~~e~~~~i~~l~---~~~~~~m~~na~~~a~~-~~~~~f  325 (339)
T 3rhz_A          252 YCSYKLGSFLAAGIPVIVQEGIANQ-ELIENNGLGWIVK-DVEEAIMKVKNVN---EDEYIELVKNVRSFNPI-LRKGFF  325 (339)
T ss_dssp             CCCHHHHHHHHHTCCEEEETTCTTT-HHHHHHTCEEEES-SHHHHHHHHHHCC---HHHHHHHHHHHHHHTHH-HHTTHH
T ss_pred             cChHHHHHHHHcCCCEEEccChhHH-HHHHhCCeEEEeC-CHHHHHHHHHHhC---HHHHHHHHHHHHHHHHH-hhccHH
Confidence            5699999999999999999999988 9999999999998 7899999998862   56789999999988654 555554


Q ss_pred             HHH
Q 011355          460 AAA  462 (488)
Q Consensus       460 ~~~  462 (488)
                      .++
T Consensus       326 ~k~  328 (339)
T 3rhz_A          326 TRR  328 (339)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.92  E-value=1.4e-24  Score=210.80  Aligned_cols=332  Identities=14%  Similarity=0.112  Sum_probs=214.0

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCC----CCCCCC-ceEEEecCCCCccCcchh
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCS----FPTYPI-SSLYFHLSKPTAAGYLDQ  148 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~----~~~~~~-~~i~~~~~~~~~~~~~~~  148 (488)
                      .+|||++++.      ...|.. .+..++++|++. |+++.++........    ....+. +...+.............
T Consensus        24 ~m~ki~~v~G------tr~~~~-~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~   96 (396)
T 3dzc_A           24 AMKKVLIVFG------TRPEAI-KMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVT   96 (396)
T ss_dssp             CCEEEEEEEC------SHHHHH-HHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHH
T ss_pred             CCCeEEEEEe------ccHhHH-HHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHHH
Confidence            4579999986      333443 446899999987 788876665432110    001121 222222211111011122


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEeCCcc---hH---HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          149 SIVWQQLQTQNSTGKPFDVIHTESVG---LR---HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Dvv~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ......+.+..++. +||+|++++..   ++   .....++| ++...++......+            .++....    
T Consensus        97 ~~~~~~l~~~l~~~-kPDvVi~~g~~~~~~~~~~aa~~~~IP-v~h~~ag~rs~~~~------------~~~~~~~----  158 (396)
T 3dzc_A           97 SKILLGMQQVLSSE-QPDVVLVHGDTATTFAASLAAYYQQIP-VGHVEAGLRTGNIY------------SPWPEEG----  158 (396)
T ss_dssp             HHHHHHHHHHHHHH-CCSEEEEETTSHHHHHHHHHHHTTTCC-EEEETCCCCCSCTT------------SSTTHHH----
T ss_pred             HHHHHHHHHHHHhc-CCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCccccccc------------cCCcHHH----
Confidence            33344444444444 89999998621   22   22334677 66544332110000            0000111    


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCC-ccCCCcCCCcc-c----chhhhhhhC-CCCCCcEE
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNG-VDEEVFKPDVA-M----GKDFKKKFG-IPENRSLV  295 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ng-vd~~~~~~~~~-~----~~~~r~~~~-i~~~~~~~  295 (488)
                      .+..    .-+.+|.++++|+..++.+.+ .|++++++.+++|+ +|...+..... .    +.++++++| ++++++++
T Consensus       159 ~r~~----~~~~a~~~~~~se~~~~~l~~-~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~v  233 (396)
T 3dzc_A          159 NRKL----TAALTQYHFAPTDTSRANLLQ-ENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLI  233 (396)
T ss_dssp             HHHH----HHHTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEE
T ss_pred             HHHH----HHHhcCEEECCCHHHHHHHHH-cCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEE
Confidence            1111    123578999999999999988 79998999999995 45432222110 1    256788899 46666566


Q ss_pred             EEEEeeec-cccChHHHHHHHHHhHhhccCCCCCeEEEEE-eCCC-chhHHhhh---CCcEEEeCccCHHHHHHHHHhcC
Q 011355          296 LGMAGRLV-KDKGHPLMFEALKQLLAENDTFRRSTVFLVA-GDGP-WGARYRDL---GTNVIVLGPLDQTRLAMFYNAID  369 (488)
Q Consensus       296 i~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~g~-~~~~~~~l---~~~V~~~g~v~~~~l~~~~~~ad  369 (488)
                      +++.+|.. ..|+++.+++|+..+.+++    |++++++. |.++ ..+.+++.   .++|.+.++++..++..+|+.||
T Consensus       234 lv~~hR~~~~~~~~~~ll~A~~~l~~~~----~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad  309 (396)
T 3dzc_A          234 LVTGHRRESFGGGFERICQALITTAEQH----PECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAH  309 (396)
T ss_dssp             EEECSCBCCCTTHHHHHHHHHHHHHHHC----TTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCS
T ss_pred             EEEECCcccchhHHHHHHHHHHHHHHhC----CCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcC
Confidence            66666643 3478999999999999888    89998885 6544 24445442   36899999999889999999999


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEEe-CCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011355          370 IFVNPTLRAQGLDHTVLEAMLSGKPLMAT-RLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARK  448 (488)
Q Consensus       370 v~v~ps~~~eg~~~~~lEAma~G~PVI~~-~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~  448 (488)
                      ++|.+|    | | ..+|||++|+|||++ +.++.. +.+.+| .+++++.|.+++++++.+++++ ++.+++|++++..
T Consensus       310 ~vv~~S----G-g-~~~EA~a~G~PvV~~~~~~~~~-e~v~~G-~~~lv~~d~~~l~~ai~~ll~d-~~~~~~m~~~~~~  380 (396)
T 3dzc_A          310 IILTDS----G-G-IQEEAPSLGKPVLVMRETTERP-EAVAAG-TVKLVGTNQQQICDALSLLLTD-PQAYQAMSQAHNP  380 (396)
T ss_dssp             EEEESC----S-G-GGTTGGGGTCCEEECCSSCSCH-HHHHHT-SEEECTTCHHHHHHHHHHHHHC-HHHHHHHHTSCCT
T ss_pred             EEEECC----c-c-HHHHHHHcCCCEEEccCCCcch-HHHHcC-ceEEcCCCHHHHHHHHHHHHcC-HHHHHHHhhccCC
Confidence            999988    2 3 348999999999998 677766 776666 5777766899999999999999 8999999877543


Q ss_pred             H
Q 011355          449 R  449 (488)
Q Consensus       449 ~  449 (488)
                      +
T Consensus       381 ~  381 (396)
T 3dzc_A          381 Y  381 (396)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.92  E-value=5.5e-24  Score=206.90  Aligned_cols=346  Identities=15%  Similarity=0.098  Sum_probs=215.0

Q ss_pred             CCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCC----CCC-ceEEEecCCCCccCcc
Q 011355           74 LKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKR--GHELHIFTASCLNCSFPT----YPI-SSLYFHLSKPTAAGYL  146 (488)
Q Consensus        74 ~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~----~~~-~~i~~~~~~~~~~~~~  146 (488)
                      |++|||++++.      ...+.-. +..++++|.+.  |+++.++.+.........    .+. +...+...........
T Consensus        25 m~~~kI~~v~G------tr~~~~~-~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~~~~~~~   97 (403)
T 3ot5_A           25 MAKIKVMSIFG------TRPEAIK-MAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAE   97 (403)
T ss_dssp             -CCEEEEEEEC------SHHHHHH-HHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-CCCHHH
T ss_pred             cccceEEEEEe------cChhHHH-HHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCCCCCHHH
Confidence            56689999996      3334444 47899999987  688876665532111000    111 1222222111110111


Q ss_pred             hhHHHHHHHHHHhcCCCCCcEEEeCCcc---h---HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHH
Q 011355          147 DQSIVWQQLQTQNSTGKPFDVIHTESVG---L---RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAE  220 (488)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Dvv~~~~~~---~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (488)
                      ........+.+..++. +||+|++++..   +   ......++| ++....+......          +  .++.....+
T Consensus        98 ~~~~~~~~l~~~l~~~-kPD~Vi~~gd~~~~l~~~laA~~~~IP-v~h~~aglrs~~~----------~--~~~p~~~~r  163 (403)
T 3ot5_A           98 ITSRVMNGINEVIAAE-NPDIVLVHGDTTTSFAAGLATFYQQKM-LGHVEAGLRTWNK----------Y--SPFPEEMNR  163 (403)
T ss_dssp             HHHHHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHHHTTCE-EEEESCCCCCSCT----------T--SSTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHc-CCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCcccccc----------c--cCCcHHHHH
Confidence            1233444444444444 89999998631   2   222334667 5543333211000          0  000011111


Q ss_pred             HHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecC-CccCCCcCCCcccchhhhhhhCCCCCCcEEEEEE
Q 011355          221 RASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILN-GVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMA  299 (488)
Q Consensus       221 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~n-gvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~  299 (488)
                      .+   .     -+.+|.++++|+..++.+.+ .|++++++.+++| ++|...+..........++++   .++++++++.
T Consensus       164 ~~---~-----~~~a~~~~~~se~~~~~l~~-~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv~~  231 (403)
T 3ot5_A          164 QL---T-----GVMADIHFSPTKQAKENLLA-EGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILMTA  231 (403)
T ss_dssp             HH---H-----HHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEECC
T ss_pred             HH---H-----HHhcCEEECCCHHHHHHHHH-cCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEEEe
Confidence            11   1     12368899999999999998 7999899999999 456543322222223455555   3444677777


Q ss_pred             eeecc-ccChHHHHHHHHHhHhhccCCCCCeEEEEE-eCCC-chhHHhh-h--CCcEEEeCccCHHHHHHHHHhcCEEEe
Q 011355          300 GRLVK-DKGHPLMFEALKQLLAENDTFRRSTVFLVA-GDGP-WGARYRD-L--GTNVIVLGPLDQTRLAMFYNAIDIFVN  373 (488)
Q Consensus       300 Grl~~-~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~g~-~~~~~~~-l--~~~V~~~g~v~~~~l~~~~~~adv~v~  373 (488)
                      ||... .|+++.+++|+..+.++.    |++++++. |.++ ..+.+++ +  .++|.+.|+++.+++..+|+.||++|.
T Consensus       232 ~r~~~~~~~l~~ll~a~~~l~~~~----~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~  307 (403)
T 3ot5_A          232 HRRENLGEPMQGMFEAVREIVESR----EDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFT  307 (403)
T ss_dssp             CCHHHHTTHHHHHHHHHHHHHHHC----TTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEE
T ss_pred             CcccccCcHHHHHHHHHHHHHHhC----CCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEE
Confidence            77643 477899999999999888    89998887 4443 2344444 2  368999999999999999999999998


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEEe-CCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 011355          374 PTLRAQGLDHTVLEAMLSGKPLMAT-RLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLN  452 (488)
Q Consensus       374 ps~~~eg~~~~~lEAma~G~PVI~~-~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~  452 (488)
                      +|      |...+||+++|+|+|++ +.++.. +.+..| +|+++++|.+++++++.+++++ ++.+++|++++..+.. 
T Consensus       308 ~S------Gg~~~EA~a~g~PvV~~~~~~~~~-e~v~~g-~~~lv~~d~~~l~~ai~~ll~~-~~~~~~m~~~~~~~g~-  377 (403)
T 3ot5_A          308 DS------GGVQEEAPGMGVPVLVLRDTTERP-EGIEAG-TLKLIGTNKENLIKEALDLLDN-KESHDKMAQAANPYGD-  377 (403)
T ss_dssp             CC------HHHHHHGGGTTCCEEECCSSCSCH-HHHHHT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHHHSCCTTCC-
T ss_pred             CC------ccHHHHHHHhCCCEEEecCCCcch-hheeCC-cEEEcCCCHHHHHHHHHHHHcC-HHHHHHHHhhcCcccC-
Confidence            77      22448999999999998 677765 666544 8888877999999999999998 8888888876544432 


Q ss_pred             hCCHHHHHHHHHHH
Q 011355          453 LFTATKMAAAYERL  466 (488)
Q Consensus       453 ~fs~~~~~~~~~~~  466 (488)
                      ..+.+++++.+.++
T Consensus       378 ~~aa~rI~~~l~~~  391 (403)
T 3ot5_A          378 GFAANRILAAIKSH  391 (403)
T ss_dssp             SCHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHH
Confidence            23445555544443

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.91  E-value=1.7e-23  Score=205.61  Aligned_cols=344  Identities=13%  Similarity=0.033  Sum_probs=216.2

Q ss_pred             CCCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEec--------------C
Q 011355           73 PLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHL--------------S  138 (488)
Q Consensus        73 ~~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~--------------~  138 (488)
                      ...+|||++++.      ..+|....+..++++|+++||+|++++...........+.+.+.+..              .
T Consensus        17 ~~~~MrIl~~~~------~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   90 (412)
T 3otg_A           17 EGRHMRVLFASL------GTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFD   90 (412)
T ss_dssp             -CCSCEEEEECC------SSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred             ccceeEEEEEcC------CCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhc
Confidence            346799999985      35777777889999999999999999975321100012222222221              0


Q ss_pred             ---------CCCccCcchhHH------HHHHHHHHhcCCCCCcEEEeCCcchHH---hhhccCCcEEEeeeCCcchhhhh
Q 011355          139 ---------KPTAAGYLDQSI------VWQQLQTQNSTGKPFDVIHTESVGLRH---TRARNLTNVVVSWHGIAYETIHS  200 (488)
Q Consensus       139 ---------~~~~~~~~~~~~------~~~~~~~~~~~~~~~Dvv~~~~~~~~~---~~~~~~p~~v~~~h~~~~~~~~~  200 (488)
                               ............      ....+....++. +||+|+++...+..   ....++| ++...|+......  
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pDvVv~~~~~~~~~~aa~~~giP-~v~~~~~~~~~~~--  166 (412)
T 3otg_A           91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL-RPDLVVQEISNYGAGLAALKAGIP-TICHGVGRDTPDD--  166 (412)
T ss_dssp             CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHTCC-EEEECCSCCCCSH--
T ss_pred             ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-CCCEEEECchhhHHHHHHHHcCCC-EEEecccccCchh--
Confidence                     000000011111      113333333333 89999998643322   2345678 8887777532110  


Q ss_pred             hhhHhhhcCCCChhHHHHHHHHHHHHHHhh-------hcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcC
Q 011355          201 DIIQELLRTPEEPQAYALAERASKVVEEVK-------FFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFK  273 (488)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~  273 (488)
                                   ....+...+.+......       ....+|.+++.++...+...+....  ....+.+.+.+..   
T Consensus       167 -------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---  228 (412)
T 3otg_A          167 -------------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARP--RRHELRPVPFAEQ---  228 (412)
T ss_dssp             -------------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCT--TEEECCCCCCCCC---
T ss_pred             -------------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCC--CcceeeccCCCCC---
Confidence                         01222222333322211       1246788899888776665543322  1111112221110   


Q ss_pred             CCcccchhhhhhh--CCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEe-CCCchhHHhhhCCcE
Q 011355          274 PDVAMGKDFKKKF--GIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAG-DGPWGARYRDLGTNV  350 (488)
Q Consensus       274 ~~~~~~~~~r~~~--~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-~g~~~~~~~~l~~~V  350 (488)
                            .. +..+  ..++++++++++.|++. .++.+.+.+++..+.+      .+.++++++ ++...+.++++.++|
T Consensus       229 ------~~-~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~------~~~~~~~~~g~~~~~~~l~~~~~~v  294 (412)
T 3otg_A          229 ------GD-LPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG------LDADVLVASGPSLDVSGLGEVPANV  294 (412)
T ss_dssp             ------CC-CCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT------SSSEEEEECCSSCCCTTCCCCCTTE
T ss_pred             ------CC-CCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc------CCCEEEEEECCCCChhhhccCCCcE
Confidence                  00 1111  12345557888999986 6777777777777754      245555554 444466666778899


Q ss_pred             EEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHH
Q 011355          351 IVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVES  423 (488)
Q Consensus       351 ~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~  423 (488)
                      .+.|+++   +.++|+.||++|.++     .+.+++|||++|+|+|+.+.++    .. +.+.+.+.|+++++   |+++
T Consensus       295 ~~~~~~~---~~~~l~~ad~~v~~~-----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~-~~v~~~g~g~~~~~~~~~~~~  365 (412)
T 3otg_A          295 RLESWVP---QAALLPHVDLVVHHG-----GSGTTLGALGAGVPQLSFPWAGDSFANA-QAVAQAGAGDHLLPDNISPDS  365 (412)
T ss_dssp             EEESCCC---HHHHGGGCSEEEESC-----CHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECCGGGCCHHH
T ss_pred             EEeCCCC---HHHHHhcCcEEEECC-----chHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEecCcccCCHHH
Confidence            9999983   789999999999754     2479999999999999987764    34 56778889999986   7899


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          424 VKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       424 la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                      ++++|.++++| ++.+++|++.+++.... ++++.+++.+++++.+
T Consensus       366 l~~ai~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~  409 (412)
T 3otg_A          366 VSGAAKRLLAE-ESYRAGARAVAAEIAAM-PGPDEVVRLLPGFASR  409 (412)
T ss_dssp             HHHHHHHHHHC-HHHHHHHHHHHHHHHHS-CCHHHHHTTHHHHHC-
T ss_pred             HHHHHHHHHhC-HHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHhcc
Confidence            99999999999 99999999999988765 7999999999888743

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.87  E-value=1.5e-20  Score=185.67  Aligned_cols=357  Identities=15%  Similarity=0.121  Sum_probs=206.7

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCc--------cCcc
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTA--------AGYL  146 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~  146 (488)
                      ..|||++++.      ..+|....+..++++|.++||+|++++...........+...+.+....+..        ....
T Consensus         6 ~m~kIl~~~~------~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   79 (430)
T 2iyf_A            6 TPAHIAMFSI------AAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLL   79 (430)
T ss_dssp             --CEEEEECC------SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHH
T ss_pred             ccceEEEEeC------CCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCccccccccccchhhH
Confidence            3579999863      3467777789999999999999999997653211111222222222111100        0100


Q ss_pred             h--------hHHHHHHHHHHhcCCCCCcEEEeCCcchH---HhhhccCCcEEEeeeCCcch-hhhh----hhhHhhhcCC
Q 011355          147 D--------QSIVWQQLQTQNSTGKPFDVIHTESVGLR---HTRARNLTNVVVSWHGIAYE-TIHS----DIIQELLRTP  210 (488)
Q Consensus       147 ~--------~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~---~~~~~~~p~~v~~~h~~~~~-~~~~----~~~~~~~~~~  210 (488)
                      .        .......+....+.. +||+|+++....+   .....++| .+...+..... .+..    ......... 
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~d~~~~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-  156 (430)
T 2iyf_A           80 DNVEPFLNDAIQALPQLADAYADD-IPDLVLHDITSYPARVLARRWGVP-AVSLSPNLVAWKGYEEEVAEPMWREPRQT-  156 (430)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTS-CCSEEEEETTCHHHHHHHHHHTCC-EEEEESSCCCCTTHHHHTHHHHHHHHHHS-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEECCccHHHHHHHHHcCCC-EEEEecccccccccccccccchhhhhccc-
Confidence            0        011223333444444 8999998754322   22334678 77666554311 1100    000000000 


Q ss_pred             CChhHHHHHHHHHHHHHHh-------hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhh
Q 011355          211 EEPQAYALAERASKVVEEV-------KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFK  283 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~-------~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r  283 (488)
                        +....+...+.+.....       .++..+|.+++.+....+....  .++..++..++++++......         
T Consensus       157 --~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~v~~vG~~~~~~~~~~---------  223 (430)
T 2iyf_A          157 --ERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHAD--RVDEDVYTFVGACQGDRAEEG---------  223 (430)
T ss_dssp             --HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGG--GSCTTTEEECCCCC-----CC---------
T ss_pred             --hHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcc--cCCCccEEEeCCcCCCCCCCC---------
Confidence              00011112222222210       1222568888887665443322  222222777776654321000         


Q ss_pred             hhhCC-CCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEE-EEEeCCCchhHHhhhCCcEEEeCccCHHHH
Q 011355          284 KKFGI-PENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVF-LVAGDGPWGARYRDLGTNVIVLGPLDQTRL  361 (488)
Q Consensus       284 ~~~~i-~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l-~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l  361 (488)
                       .+.. .++++++++++|++. .++.+.+.+++..+.+ .    +++++ +++|+++..+.++++.++|.+.|++++.  
T Consensus       224 -~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~-~----~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~--  294 (430)
T 2iyf_A          224 -GWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGN-L----PGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQL--  294 (430)
T ss_dssp             -CCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTT-C----TTEEEEEECC---CGGGGCSCCTTEEEESSCCHH--
T ss_pred             -CCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhc-C----CCeEEEEEeCCCCChHHhccCCCCeEEEecCCHH--
Confidence             0111 134447888999987 5555554444444432 2    46777 5789887666666677899999999844  


Q ss_pred             HHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHHHHHHHHHHHhc
Q 011355          362 AMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVESVKKALYGIWAD  434 (488)
Q Consensus       362 ~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~  434 (488)
                       ++|+.||++|..+    | .++++|||++|+|+|+.+.++    .. +.+.+.+.|+.++.   |.++++++|.++++|
T Consensus       295 -~~l~~ad~~v~~~----G-~~t~~Ea~~~G~P~i~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~  367 (430)
T 2iyf_A          295 -AILRQADLFVTHA----G-AGGSQEGLATATPMIAVPQAVDQFGNA-DMLQGLGVARKLATEEATADLLRETALALVDD  367 (430)
T ss_dssp             -HHHTTCSEEEECC----C-HHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCCC-CCHHHHHHHHHHHHHC
T ss_pred             -HHhhccCEEEECC----C-ccHHHHHHHhCCCEEECCCccchHHHH-HHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcC
Confidence             7899999999744    2 379999999999999998765    23 45677788999875   789999999999998


Q ss_pred             CHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Q 011355          435 GREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       435 ~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                       ++.++++++.+++.... ++++++++.+++++++..
T Consensus       368 -~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~  402 (430)
T 2iyf_A          368 -PEVARRLRRIQAEMAQE-GGTRRAADLIEAELPARH  402 (430)
T ss_dssp             -HHHHHHHHHHHHHHHHH-CHHHHHHHHHHTTSCC--
T ss_pred             -HHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHhhccc
Confidence             88899999998887755 689998888887776543

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.87  E-value=2.8e-20  Score=178.80  Aligned_cols=326  Identities=17%  Similarity=0.132  Sum_probs=197.4

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCC--CCCCCCceEEEecCC-------CCccCcch
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCS--FPTYPISSLYFHLSK-------PTAAGYLD  147 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~~~~i~~~~~~-------~~~~~~~~  147 (488)
                      .||++...      ..||.-.-+..++++|.++||+|.+++....-..  ....+.+...+....       ......+.
T Consensus         3 ~~i~i~~G------GTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~   76 (365)
T 3s2u_A            3 GNVLIMAG------GTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLE   76 (365)
T ss_dssp             CEEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHH
T ss_pred             CcEEEEcC------CCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHH
Confidence            47887663      4577767788999999999999999986542110  011122221111110       00111222


Q ss_pred             hHHHHHHHHHHhcCCCCCcEEEeCCcc--hH---HhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHH
Q 011355          148 QSIVWQQLQTQNSTGKPFDVIHTESVG--LR---HTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERA  222 (488)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Dvv~~~~~~--~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ....+.+..+..++. +||+|+.....  .+   .....++| ++..-.+.               .++     .    .
T Consensus        77 ~~~~~~~~~~~l~~~-~PDvVi~~g~~~s~p~~laA~~~~iP-~vihe~n~---------------~~G-----~----~  130 (365)
T 3s2u_A           77 LLKSLFQALRVIRQL-RPVCVLGLGGYVTGPGGLAARLNGVP-LVIHEQNA---------------VAG-----T----A  130 (365)
T ss_dssp             HHHHHHHHHHHHHHH-CCSEEEECSSSTHHHHHHHHHHTTCC-EEEEECSS---------------SCC-----H----H
T ss_pred             HHHHHHHHHHHHHhc-CCCEEEEcCCcchHHHHHHHHHcCCC-EEEEecch---------------hhh-----h----H
Confidence            233333333333333 89999987532  22   22334667 55322221               111     0    1


Q ss_pred             HHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          223 SKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       223 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      .++     ..+.++.+....+..       + ....++.+++|++..+.+...       +.+.+++++++.++++.|+.
T Consensus       131 nr~-----l~~~a~~v~~~~~~~-------~-~~~~k~~~~g~pvr~~~~~~~-------~~~~~~~~~~~~ilv~gGs~  190 (365)
T 3s2u_A          131 NRS-----LAPIARRVCEAFPDT-------F-PASDKRLTTGNPVRGELFLDA-------HARAPLTGRRVNLLVLGGSL  190 (365)
T ss_dssp             HHH-----HGGGCSEEEESSTTS-------S-CC---CEECCCCCCGGGCCCT-------TSSCCCTTSCCEEEECCTTT
T ss_pred             HHh-----hccccceeeeccccc-------c-cCcCcEEEECCCCchhhccch-------hhhcccCCCCcEEEEECCcC
Confidence            111     123466666554432       1 134577788888876554332       22344556665677777888


Q ss_pred             ccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch---hHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCC
Q 011355          303 VKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG---ARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ  379 (488)
Q Consensus       303 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~---~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~e  379 (488)
                      ...+..+.+.+++..+..+.    ....++++|.+...   +.++++..++.+.|+++  ++.++|+.||++|.   + .
T Consensus       191 g~~~~~~~~~~al~~l~~~~----~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~--dm~~~l~~aDlvI~---r-a  260 (365)
T 3s2u_A          191 GAEPLNKLLPEALAQVPLEI----RPAIRHQAGRQHAEITAERYRTVAVEADVAPFIS--DMAAAYAWADLVIC---R-A  260 (365)
T ss_dssp             TCSHHHHHHHHHHHTSCTTT----CCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCS--CHHHHHHHCSEEEE---C-C
T ss_pred             CccccchhhHHHHHhccccc----ceEEEEecCccccccccceecccccccccccchh--hhhhhhccceEEEe---c-C
Confidence            88877788888888876543    23334556665433   33445677899999976  99999999999996   2 2


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCCccc-------ceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLASIVG-------SVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKKGLVARKR  449 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~~~~-------e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~a~~~  449 (488)
                      | ++++.|+|++|+|+|..+.+...+       +.+.+.+.|++++.   ++++|+++|.++++| ++.+++|++++++.
T Consensus       261 G-~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d-~~~~~~m~~~a~~~  338 (365)
T 3s2u_A          261 G-ALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMH-PETLRSMADQARSL  338 (365)
T ss_dssp             C-HHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-THHHHHHHHHHHHT
T ss_pred             C-cchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCC-HHHHHHHHHHHHhc
Confidence            3 689999999999999887664321       24566778888875   589999999999999 99999999999987


Q ss_pred             HhhhCCHHHHHHHHHHHH
Q 011355          450 GLNLFTATKMAAAYERLF  467 (488)
Q Consensus       450 ~~~~fs~~~~~~~~~~~~  467 (488)
                      ... ...+.+++.++++.
T Consensus       339 ~~~-~aa~~ia~~i~~la  355 (365)
T 3s2u_A          339 AKP-EATRTVVDACLEVA  355 (365)
T ss_dssp             CCT-THHHHHHHHHHHHC
T ss_pred             CCc-cHHHHHHHHHHHHH
Confidence            654 34555555555443

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.86  E-value=1.3e-21  Score=191.21  Aligned_cols=338  Identities=15%  Similarity=0.081  Sum_probs=180.6

Q ss_pred             CCCCceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecC-------------
Q 011355           72 PPLKLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLS-------------  138 (488)
Q Consensus        72 ~~~~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~-------------  138 (488)
                      ....+|||++++.      ...|....+..|+++|+++||+|++++...........+...+.+...             
T Consensus        11 ~~~~~MrIl~~~~------~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~   84 (398)
T 4fzr_A           11 PRGSHMRILVIAG------CSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREG   84 (398)
T ss_dssp             ----CCEEEEECC------SSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTS
T ss_pred             CCCCceEEEEEcC------CCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccC
Confidence            3446799999985      245666677899999999999999999743211111123333333210             


Q ss_pred             CCCc--cCc---c-hh--------HHHHHHHHHHhcCCCCCcEEEeCCcchHH---hhhccCCcEEEeeeCCcchhhhhh
Q 011355          139 KPTA--AGY---L-DQ--------SIVWQQLQTQNSTGKPFDVIHTESVGLRH---TRARNLTNVVVSWHGIAYETIHSD  201 (488)
Q Consensus       139 ~~~~--~~~---~-~~--------~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~---~~~~~~p~~v~~~h~~~~~~~~~~  201 (488)
                      .+..  ...   . ..        ......+....+.. +||+|+++...+..   ....++| ++...|+.....   .
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pDlVv~d~~~~~~~~~a~~~giP-~v~~~~~~~~~~---~  159 (398)
T 4fzr_A           85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW-KPDLVLTETYSLTGPLVAATLGIP-WIEQSIRLASPE---L  159 (398)
T ss_dssp             CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEETTCTHHHHHHHHHTCC-EEEECCSSCCCH---H
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECccccHHHHHHHhhCCC-EEEeccCCCCch---h
Confidence            0000  000   0 00        01112233333333 89999987543322   2345678 888887753221   0


Q ss_pred             hhHhhhcCCCChhHHHHHHHHHHHHHHh--hhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccc
Q 011355          202 IIQELLRTPEEPQAYALAERASKVVEEV--KFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG  279 (488)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~  279 (488)
                      ..            ......+.+.....  ..+...+..+..+....+....   .....+..++...       ..   
T Consensus       160 ~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~---  214 (398)
T 4fzr_A          160 IK------------SAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQPK---PGTTKMRYVPYNG-------RN---  214 (398)
T ss_dssp             HH------------HHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC-------CCCEECCCCCCCC-------SS---
T ss_pred             hh------------HHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCCC---CCCCCeeeeCCCC-------CC---
Confidence            00            11112222222111  1122334455544432221111   0001111111100       00   


Q ss_pred             hhhhhhhCCCCCCcEEEEEEeeecccc----------ChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCc
Q 011355          280 KDFKKKFGIPENRSLVLGMAGRLVKDK----------GHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTN  349 (488)
Q Consensus       280 ~~~r~~~~i~~~~~~~i~~~Grl~~~K----------g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~  349 (488)
                      ..+.+.+..+++++.+++++|++...|          .+..+++++..         .+++++++++++..+.++++.++
T Consensus       215 ~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~---------~~~~~v~~~~~~~~~~l~~~~~~  285 (398)
T 4fzr_A          215 DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK---------LGFEVVVAVSDKLAQTLQPLPEG  285 (398)
T ss_dssp             CCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG---------GTCEEEECCCC--------CCTT
T ss_pred             CCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh---------CCCEEEEEeCCcchhhhccCCCc
Confidence            111111111234457888999997555          34444444433         25788888877766667778899


Q ss_pred             EEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCC----CcccceeecCCceeEeCC---CHH
Q 011355          350 VIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLA----SIVGSVIVGTDMGYLFSP---QVE  422 (488)
Q Consensus       350 V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~----~~~~e~v~~~~~g~l~~~---d~~  422 (488)
                      |.+.|+++   +.+++..||++|..     |.+.+++|||++|+|+|+....    +.. +.+.+.+.|+++++   |.+
T Consensus       286 v~~~~~~~---~~~ll~~ad~~v~~-----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~  356 (398)
T 4fzr_A          286 VLAAGQFP---LSAIMPACDVVVHH-----GGHGTTLTCLSEGVPQVSVPVIAEVWDSA-RLLHAAGAGVEVPWEQAGVE  356 (398)
T ss_dssp             EEEESCCC---HHHHGGGCSEEEEC-----CCHHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHTTSEEECC-------
T ss_pred             EEEeCcCC---HHHHHhhCCEEEec-----CCHHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEecCcccCCHH
Confidence            99999986   56788899999962     3367999999999999996554    333 56778889999985   688


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 011355          423 SVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYER  465 (488)
Q Consensus       423 ~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~  465 (488)
                      +++++|.++++| ++.+++|++.+++.... .+++.+++.+++
T Consensus       357 ~l~~ai~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~  397 (398)
T 4fzr_A          357 SVLAACARIRDD-SSYVGNARRLAAEMATL-PTPADIVRLIEQ  397 (398)
T ss_dssp             CHHHHHHHHHHC-THHHHHHHHHHHHHTTS-CCHHHHHHHHTC
T ss_pred             HHHHHHHHHHhC-HHHHHHHHHHHHHHHcC-CCHHHHHHHHhc
Confidence            999999999999 89999999998888755 799998887653

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.85  E-value=3.3e-20  Score=180.87  Aligned_cols=163  Identities=13%  Similarity=0.091  Sum_probs=128.0

Q ss_pred             CCCcEEEEEEeeeccccCh-HHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhc
Q 011355          290 ENRSLVLGMAGRLVKDKGH-PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAI  368 (488)
Q Consensus       290 ~~~~~~i~~~Grl~~~Kg~-~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a  368 (488)
                      ++++.++++.|+....|+. ..+++++.+. .+.    |+++++++|+++..+.+..+.++|.+.|+++..+   ++..|
T Consensus       216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~----p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~---ll~~a  287 (391)
T 3tsa_A          216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TEL----PGVEAVIAVPPEHRALLTDLPDNARIAESVPLNL---FLRTC  287 (391)
T ss_dssp             CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS----TTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGG---TGGGC
T ss_pred             CCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC----CCeEEEEEECCcchhhcccCCCCEEEeccCCHHH---HHhhC
Confidence            4555788888998775554 7777777777 666    7999999988776666667778999999987654   55999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC-----CHHHHHHHHHHHHhcCHHHH
Q 011355          369 DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP-----QVESVKKALYGIWADGREVL  439 (488)
Q Consensus       369 dv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~-----d~~~la~~i~~ll~~~~~~~  439 (488)
                      |++|..     |.+.+++|||++|+|+|+....+    .. +.+.+.+.|.++++     |.+++++++.++++| ++.+
T Consensus       288 d~~v~~-----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~-~~~~  360 (391)
T 3tsa_A          288 ELVICA-----GGSGTAFTATRLGIPQLVLPQYFDQFDYA-RNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGD-TGFA  360 (391)
T ss_dssp             SEEEEC-----CCHHHHHHHHHTTCCEEECCCSTTHHHHH-HHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTC-THHH
T ss_pred             CEEEeC-----CCHHHHHHHHHhCCCEEecCCcccHHHHH-HHHHHcCCEEecCcccccCCHHHHHHHHHHHHcC-HHHH
Confidence            999963     33469999999999999965533    33 45777889999874     699999999999999 8899


Q ss_pred             HHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          440 EKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       440 ~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      ++|++.+++.... .+++.+++.++++..
T Consensus       361 ~~~~~~~~~~~~~-~~~~~~~~~i~~~~~  388 (391)
T 3tsa_A          361 AAAIKLSDEITAM-PHPAALVRTLENTAA  388 (391)
T ss_dssp             HHHHHHHHHHHTS-CCHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHcC-CCHHHHHHHHHHHHh
Confidence            9999888887755 699998888776543

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.83  E-value=5.8e-19  Score=172.69  Aligned_cols=353  Identities=14%  Similarity=0.089  Sum_probs=201.4

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCC------cc--Ccch-
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPT------AA--GYLD-  147 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~------~~--~~~~-  147 (488)
                      |||++++.      ...|.-..+..|+++|+++||+|++++...........+.....+....+.      ..  .... 
T Consensus         5 ~~il~~~~------~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (402)
T 3ia7_A            5 RHILFANV------QGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQ   78 (402)
T ss_dssp             CEEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHH
T ss_pred             CEEEEEeC------CCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHH
Confidence            49999885      346777888899999999999999999643111111112222222110000      00  0000 


Q ss_pred             ----hH----HHHHHHHHHhcCCCCCcEEEeC-CcchH---HhhhccCCcEEEeeeCCcchhhhhh---hhHhhhcCCCC
Q 011355          148 ----QS----IVWQQLQTQNSTGKPFDVIHTE-SVGLR---HTRARNLTNVVVSWHGIAYETIHSD---IIQELLRTPEE  212 (488)
Q Consensus       148 ----~~----~~~~~~~~~~~~~~~~Dvv~~~-~~~~~---~~~~~~~p~~v~~~h~~~~~~~~~~---~~~~~~~~~~~  212 (488)
                          ..    .....+....... +||+|+++ .....   .....++| ++...|+.........   ..... . ...
T Consensus        79 ~~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~d~~~~~~~~~aA~~~giP-~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~  154 (402)
T 3ia7_A           79 LHLVYVRENVAILRAAEEALGDN-PPDLVVYDVFPFIAGRLLAARWDRP-AVRLTGGFAANEHYSLFKELWKSN-G-QRH  154 (402)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTC-CCSEEEEESTTHHHHHHHHHHHTCC-EEEEESSCCCBTTBCHHHHHHHHH-T-CCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc-CCCEEEECchHHHHHHHHHHhhCCC-EEEEecccccCccccccccccccc-c-ccC
Confidence                00    1123334444444 89999998 43322   22345778 7777766543211111   00000 0 111


Q ss_pred             h-hHHHHHHHHHHHHHHh-------hhcCCc-cEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhh
Q 011355          213 P-QAYALAERASKVVEEV-------KFFPKY-AHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFK  283 (488)
Q Consensus       213 ~-~~~~~~~~~~~~~~~~-------~~~~~~-d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r  283 (488)
                      + ....+...+.+.....       .+.... |..++......+.....+   ..++..+++.++........       
T Consensus       155 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~~~~~~~~-------  224 (402)
T 3ia7_A          155 PADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETF---DERFAFVGPTLTGRDGQPGW-------  224 (402)
T ss_dssp             GGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGC---CTTEEECCCCCCC----CCC-------
T ss_pred             hhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccC---CCCeEEeCCCCCCcccCCCC-------
Confidence            1 1112222222222111       111122 556666554443332211   23466665443221100000       


Q ss_pred             hhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEE-EEeCCCchhHHhhhCCcEEEeCccCHHHHH
Q 011355          284 KKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFL-VAGDGPWGARYRDLGTNVIVLGPLDQTRLA  362 (488)
Q Consensus       284 ~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~-ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~  362 (488)
                        ....++++.++++.|+....+. +.+.+.+..+. +.    + ++++ ++|++...+.++++.++|.+.|++++.   
T Consensus       225 --~~~~~~~~~v~v~~G~~~~~~~-~~~~~~~~~~~-~~----~-~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~---  292 (402)
T 3ia7_A          225 --QPPRPDAPVLLVSLGNQFNEHP-EFFRACAQAFA-DT----P-WHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFH---  292 (402)
T ss_dssp             --CCSSTTCCEEEEECCSCSSCCH-HHHHHHHHHHT-TS----S-CEEEEECCTTSCGGGGCSCCTTEEEESCCCHH---
T ss_pred             --cccCCCCCEEEEECCCCCcchH-HHHHHHHHHHh-cC----C-cEEEEEeCCcCChhhhCCCCCcEEEecCCCHH---
Confidence              0012344578889999865542 23333333332 22    3 4544 467766666677778899999998844   


Q ss_pred             HHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCC-C----CcccceeecCCceeEeCC---CHHHHHHHHHHHHhc
Q 011355          363 MFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRL-A----SIVGSVIVGTDMGYLFSP---QVESVKKALYGIWAD  434 (488)
Q Consensus       363 ~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~-~----~~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~  434 (488)
                      ++|..||++|..+    | ..+++|||++|+|+|+... .    +.. +.+.+.+.|..++.   +.+++++++.++++|
T Consensus       293 ~ll~~ad~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~  366 (402)
T 3ia7_A          293 SVLAHARACLTHG----T-TGAVLEAFAAGVPLVLVPHFATEAAPSA-ERVIELGLGSVLRPDQLEPASIREAVERLAAD  366 (402)
T ss_dssp             HHHTTEEEEEECC----C-HHHHHHHHHTTCCEEECGGGCGGGHHHH-HHHHHTTSEEECCGGGCSHHHHHHHHHHHHHC
T ss_pred             HHHhhCCEEEECC----C-HHHHHHHHHhCCCEEEeCCCcccHHHHH-HHHHHcCCEEEccCCCCCHHHHHHHHHHHHcC
Confidence            8999999999744    2 3688999999999997654 2    333 56678889999885   789999999999999


Q ss_pred             CHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          435 GREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       435 ~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                       ++.++++++.+.+.... .+++.+++.+++++.+
T Consensus       367 -~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~  399 (402)
T 3ia7_A          367 -SAVRERVRRMQRDILSS-GGPARAADEVEAYLGR  399 (402)
T ss_dssp             -HHHHHHHHHHHHHHHTS-CHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHhhC-ChHHHHHHHHHHHHhh
Confidence             88889988888777644 7899999988888754

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.82  E-value=1.9e-19  Score=173.22  Aligned_cols=344  Identities=12%  Similarity=0.054  Sum_probs=211.8

Q ss_pred             ceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC-C-----CCCCCCceEEEecCCCCccCcchhH
Q 011355           76 LLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNC-S-----FPTYPISSLYFHLSKPTAAGYLDQS  149 (488)
Q Consensus        76 ~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-~-----~~~~~~~~i~~~~~~~~~~~~~~~~  149 (488)
                      .+|+++++..=|      . -.-+..++++|.+. +++.++.+..... .     ....+++...+..............
T Consensus         9 ~~~~~~v~GtRp------e-~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~   80 (385)
T 4hwg_A            9 MLKVMTIVGTRP------E-LIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIG   80 (385)
T ss_dssp             CCEEEEEECSHH------H-HHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHHH
T ss_pred             hhheeEEEEcCH------h-HHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCCCCceecCCCCCCHHHHHH
Confidence            468888885211      1 23456888999887 8877776653211 0     0112222122222211111122223


Q ss_pred             HHHHHHHHHhcCCCCCcEEEeCCc---ch--HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHH
Q 011355          150 IVWQQLQTQNSTGKPFDVIHTESV---GL--RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASK  224 (488)
Q Consensus       150 ~~~~~~~~~~~~~~~~Dvv~~~~~---~~--~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (488)
                      .....+....++. +||+|++++.   .+  ......++| ++....+....              ..++.....+.+. 
T Consensus        81 ~~~~~l~~~l~~~-kPD~Vlv~gd~~~~~aalaA~~~~IP-v~h~eaglrs~--------------~~~~pee~nR~~~-  143 (385)
T 4hwg_A           81 LVIEKVDEVLEKE-KPDAVLFYGDTNSCLSAIAAKRRKIP-IFHMEAGNRCF--------------DQRVPEEINRKII-  143 (385)
T ss_dssp             HHHHHHHHHHHHH-CCSEEEEESCSGGGGGHHHHHHTTCC-EEEESCCCCCS--------------CTTSTHHHHHHHH-
T ss_pred             HHHHHHHHHHHhc-CCcEEEEECCchHHHHHHHHHHhCCC-EEEEeCCCccc--------------cccCcHHHHHHHH-
Confidence            3444444444444 8999999751   12  222335678 65544443110              0000011111111 


Q ss_pred             HHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCC-ccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeec
Q 011355          225 VVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNG-VDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLV  303 (488)
Q Consensus       225 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~  303 (488)
                        .     +.+|.+++.++..++.+.+ .|++++++.+++|. +|...+......+..+++++|+++++ +++++.||..
T Consensus       144 --~-----~~a~~~~~~te~~~~~l~~-~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~-~iLvt~hr~e  214 (385)
T 4hwg_A          144 --D-----HISDVNITLTEHARRYLIA-EGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQ-YFLISSHREE  214 (385)
T ss_dssp             --H-----HHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTS-EEEEEECCC-
T ss_pred             --H-----hhhceeecCCHHHHHHHHH-cCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCC-EEEEEeCCch
Confidence              1     2378889999999999988 79998999999985 45432221222346788999997754 7777777643


Q ss_pred             ---cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh------CCcEEEeCccCHHHHHHHHHhcCEEEeC
Q 011355          304 ---KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL------GTNVIVLGPLDQTRLAMFYNAIDIFVNP  374 (488)
Q Consensus       304 ---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~l~~~~~~adv~v~p  374 (488)
                         ..|+++.+++|+..+.++.     ++.+++.......+.+++.      .++|.+.+.++..++..+|+.||+++.+
T Consensus       215 ~~~~~~~l~~ll~al~~l~~~~-----~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~  289 (385)
T 4hwg_A          215 NVDVKNNLKELLNSLQMLIKEY-----NFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSD  289 (385)
T ss_dssp             ----CHHHHHHHHHHHHHHHHH-----CCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEEC
T ss_pred             hcCcHHHHHHHHHHHHHHHhcC-----CeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEEC
Confidence               3478899999999987643     4566654432233444443      2689999999999999999999999965


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEEeCCCC-cccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHH-Hhh
Q 011355          375 TLRAQGLDHTVLEAMLSGKPLMATRLAS-IVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKR-GLN  452 (488)
Q Consensus       375 s~~~eg~~~~~lEAma~G~PVI~~~~~~-~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~-~~~  452 (488)
                      |      |....||+++|+|+|+.+... .+ |.+..| ++.++..|.+++++++.+++++ ++.++.|++++..+ ...
T Consensus       290 S------Ggv~~EA~alG~Pvv~~~~~ter~-e~v~~G-~~~lv~~d~~~i~~ai~~ll~d-~~~~~~m~~~~~~~~g~g  360 (385)
T 4hwg_A          290 S------GTITEEASILNLPALNIREAHERP-EGMDAG-TLIMSGFKAERVLQAVKTITEE-HDNNKRTQGLVPDYNEAG  360 (385)
T ss_dssp             C------TTHHHHHHHTTCCEEECSSSCSCT-HHHHHT-CCEECCSSHHHHHHHHHHHHTT-CBTTBCCSCCCHHHHTCC
T ss_pred             C------ccHHHHHHHcCCCEEEcCCCccch-hhhhcC-ceEEcCCCHHHHHHHHHHHHhC-hHHHHHhhccCCCCCCCC
Confidence            5      236799999999999986543 34 555544 7778766999999999999998 76666666555544 322


Q ss_pred             hCCHHHHHHHHHHHHH
Q 011355          453 LFTATKMAAAYERLFL  468 (488)
Q Consensus       453 ~fs~~~~~~~~~~~~~  468 (488)
                       .+.+++++.+.+.+.
T Consensus       361 -~aa~rI~~~l~~~~~  375 (385)
T 4hwg_A          361 -LVSKKILRIVLSYVD  375 (385)
T ss_dssp             -CHHHHHHHHHHHHHH
T ss_pred             -hHHHHHHHHHHHHhh
Confidence             356666666666543

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.81  E-value=4.1e-18  Score=167.40  Aligned_cols=355  Identities=14%  Similarity=0.103  Sum_probs=200.5

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCcc--------Ccc
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAA--------GYL  146 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~  146 (488)
                      ++|||++++.      ...|.-..+..++++|+++||+|++++...........+.....+....+...        ...
T Consensus        19 ~m~rIl~~~~------~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~   92 (415)
T 3rsc_A           19 HMAHLLIVNV------ASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLG   92 (415)
T ss_dssp             CCCEEEEECC------SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSC
T ss_pred             cCCEEEEEeC------CCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchhhccccHH
Confidence            4689999985      34677777889999999999999999964321111112222222221111000        000


Q ss_pred             h-----h----HHHHHHHHHHhcCCCCCcEEEeC-CcchH---HhhhccCCcEEEeeeCCcchhhhh---hhhHhhhcCC
Q 011355          147 D-----Q----SIVWQQLQTQNSTGKPFDVIHTE-SVGLR---HTRARNLTNVVVSWHGIAYETIHS---DIIQELLRTP  210 (488)
Q Consensus       147 ~-----~----~~~~~~~~~~~~~~~~~Dvv~~~-~~~~~---~~~~~~~p~~v~~~h~~~~~~~~~---~~~~~~~~~~  210 (488)
                      .     .    ......+....+.. +||+|+++ .....   .....++| .+...++........   ......  ..
T Consensus        93 ~~~~~~~~~~~~~~~~~l~~~l~~~-~PDlVi~d~~~~~~~~~aA~~~giP-~v~~~~~~~~~~~~~~~~~~~~~~--~~  168 (415)
T 3rsc_A           93 VRPHLMYLRENVSVLRATAEALDGD-VPDLVLYDDFPFIAGQLLAARWRRP-AVRLSAAFASNEHYSFSQDMVTLA--GT  168 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSS-CCSEEEEESTTHHHHHHHHHHTTCC-EEEEESSCCCCSSCCHHHHHHHHH--TC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEECchhhhHHHHHHHHhCCC-EEEEEecccccCcccccccccccc--cc
Confidence            0     0    11123334444444 89999987 33322   23345678 777776654321111   111110  01


Q ss_pred             CCh-hHHHHHHHHHHHHHHh-------hhcCC-ccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchh
Q 011355          211 EEP-QAYALAERASKVVEEV-------KFFPK-YAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKD  281 (488)
Q Consensus       211 ~~~-~~~~~~~~~~~~~~~~-------~~~~~-~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~  281 (488)
                      ..+ ........+.+.....       .+... .|..++......+......   +.++..+++.+....     .    
T Consensus       169 ~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~~~-----~----  236 (415)
T 3rsc_A          169 IDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF---DDRFVFVGPCFDDRR-----F----  236 (415)
T ss_dssp             CCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC---CTTEEECCCCCCCCG-----G----
T ss_pred             CChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC---CCceEEeCCCCCCcc-----c----
Confidence            111 1122222222222111       01111 2556665544433322211   234555433222110     0    


Q ss_pred             hhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEE-EeCCCchhHHhhhCCcEEEeCccCHHH
Q 011355          282 FKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLV-AGDGPWGARYRDLGTNVIVLGPLDQTR  360 (488)
Q Consensus       282 ~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~g~~~~~~~~l~~~V~~~g~v~~~~  360 (488)
                      ..+.....++++.++++.|+.....+ + +++.+.+...+.    + +++++ +|++...+.++++.++|.+.|+++.. 
T Consensus       237 ~~~~~~~~~~~~~v~v~~Gs~~~~~~-~-~~~~~~~al~~~----~-~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~-  308 (415)
T 3rsc_A          237 LGEWTRPADDLPVVLVSLGTTFNDRP-G-FFRDCARAFDGQ----P-WHVVMTLGGQVDPAALGDLPPNVEAHRWVPHV-  308 (415)
T ss_dssp             GCCCCCCSSCCCEEEEECTTTSCCCH-H-HHHHHHHHHTTS----S-CEEEEECTTTSCGGGGCCCCTTEEEESCCCHH-
T ss_pred             CcCccccCCCCCEEEEECCCCCCChH-H-HHHHHHHHHhcC----C-cEEEEEeCCCCChHHhcCCCCcEEEEecCCHH-
Confidence            00000112345578888898754432 2 233332222333    4 66666 67766666677778899999999844 


Q ss_pred             HHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHHHHHHHHHHHh
Q 011355          361 LAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVESVKKALYGIWA  433 (488)
Q Consensus       361 l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~  433 (488)
                        +++..||++|..+    | ..+++|||++|+|+|+....+    .. +.+.+.+.|..++.   +.++++++|.++++
T Consensus       309 --~ll~~ad~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~  380 (415)
T 3rsc_A          309 --KVLEQATVCVTHG----G-MGTLMEALYWGRPLVVVPQSFDVQPMA-RRVDQLGLGAVLPGEKADGDTLLAAVGAVAA  380 (415)
T ss_dssp             --HHHHHEEEEEESC----C-HHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHHTCEEECCGGGCCHHHHHHHHHHHHT
T ss_pred             --HHHhhCCEEEECC----c-HHHHHHHHHhCCCEEEeCCcchHHHHH-HHHHHcCCEEEcccCCCCHHHHHHHHHHHHc
Confidence              8899999999743    2 368999999999999965433    23 45666788888875   78999999999999


Q ss_pred             cCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 011355          434 DGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       434 ~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~  469 (488)
                      | ++.++++++.+.+.... .+.+.+++.+++++.+
T Consensus       381 ~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~  414 (415)
T 3rsc_A          381 D-PALLARVEAMRGHVRRA-GGAARAADAVEAYLAR  414 (415)
T ss_dssp             C-HHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHH
T ss_pred             C-HHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhhc
Confidence            9 88888888887777654 6888888888887653

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.79  E-value=5.3e-18  Score=165.57  Aligned_cols=158  Identities=14%  Similarity=0.061  Sum_probs=118.4

Q ss_pred             CCCcEEEEEEeeeccc-cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhc
Q 011355          290 ENRSLVLGMAGRLVKD-KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAI  368 (488)
Q Consensus       290 ~~~~~~i~~~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a  368 (488)
                      ++++.+++++|++... ++.+.+.++++.+.+      .+++++++|+++..+.++.+.++|.+.|+++   +.++|..|
T Consensus       230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~------~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~---~~~ll~~a  300 (398)
T 3oti_A          230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGE------VDADFVLALGDLDISPLGTLPRNVRAVGWTP---LHTLLRTC  300 (398)
T ss_dssp             CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT------SSSEEEEECTTSCCGGGCSCCTTEEEESSCC---HHHHHTTC
T ss_pred             CCCCEEEEEcCCCccccCcHHHHHHHHHHHHc------CCCEEEEEECCcChhhhccCCCcEEEEccCC---HHHHHhhC
Confidence            4455888899999665 466666666666654      3578888888776666777789999999985   45678899


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEEeCC----CCccc-ceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHH
Q 011355          369 DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRL----ASIVG-SVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLE  440 (488)
Q Consensus       369 dv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~----~~~~~-e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~  440 (488)
                      |++|..     |.+.+++|||++|+|+|+...    .+... +.+.+.+.|+.+++   +.+.++    ++++| ++.++
T Consensus       301 d~~v~~-----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~-~~~~~  370 (398)
T 3oti_A          301 TAVVHH-----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGD-ESLRT  370 (398)
T ss_dssp             SEEEEC-----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHC-HHHHH
T ss_pred             CEEEEC-----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcC-HHHHH
Confidence            999963     335699999999999999543    34320 45566788999875   345554    88888 99999


Q ss_pred             HHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          441 KKGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       441 ~~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                      +|++.+++.... .+++.+++.++++.
T Consensus       371 ~~~~~~~~~~~~-~~~~~~~~~l~~l~  396 (398)
T 3oti_A          371 AAREVREEMVAL-PTPAETVRRIVERI  396 (398)
T ss_dssp             HHHHHHHHHHTS-CCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCHHHHHHHHHHHh
Confidence            998888887755 79999999887765

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.77  E-value=2.6e-17  Score=159.90  Aligned_cols=157  Identities=16%  Similarity=0.131  Sum_probs=119.1

Q ss_pred             CCcEEEEEEeeeccc-------cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHH
Q 011355          291 NRSLVLGMAGRLVKD-------KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAM  363 (488)
Q Consensus       291 ~~~~~i~~~Grl~~~-------Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~  363 (488)
                      +++.+++++|++...       +.+..+++++..+         +++++++++++..+.++.+.++|.+ |+++.   .+
T Consensus       209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~---~~  275 (384)
T 2p6p_A          209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---------DVELIVAAPDTVAEALRAEVPQARV-GWTPL---DV  275 (384)
T ss_dssp             SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---------TCEEEEECCHHHHHHHHHHCTTSEE-ECCCH---HH
T ss_pred             CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC---------CcEEEEEeCCCCHHhhCCCCCceEE-cCCCH---HH
Confidence            344788899998765       5566666666432         5677776544444555567789999 99874   45


Q ss_pred             HHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHHHHHHHHHHHhcCH
Q 011355          364 FYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVESVKKALYGIWADGR  436 (488)
Q Consensus       364 ~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~  436 (488)
                      +|..||++|..+    | +++++|||++|+|+|+.+..+    .. +.+.+.+.|+.+++   +.++++++|.+++++ +
T Consensus       276 ~l~~~d~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~dq~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~  348 (384)
T 2p6p_A          276 VAPTCDLLVHHA----G-GVSTLTGLSAGVPQLLIPKGSVLEAPA-RRVADYGAAIALLPGEDSTEAIADSCQELQAK-D  348 (384)
T ss_dssp             HGGGCSEEEECS----C-TTHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTCCCHHHHHHHHHHHHHC-H
T ss_pred             HHhhCCEEEeCC----c-HHHHHHHHHhCCCEEEccCcccchHHH-HHHHHCCCeEecCcCCCCHHHHHHHHHHHHcC-H
Confidence            789999999843    3 468999999999999998754    33 45666778998874   689999999999998 8


Q ss_pred             HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          437 EVLEKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       437 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      +.++++++.+.+..... ..+.+++.++++..
T Consensus       349 ~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~  379 (384)
T 2p6p_A          349 TYARRAQDLSREISGMP-LPATVVTALEQLAH  379 (384)
T ss_dssp             HHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-CHHHHHHHHHHHhh
Confidence            88889988887777554 78888887777654

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.72  E-value=5.3e-16  Score=153.44  Aligned_cols=159  Identities=11%  Similarity=0.045  Sum_probs=118.8

Q ss_pred             CCCcEEEEEEeeecc-----ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHH
Q 011355          290 ENRSLVLGMAGRLVK-----DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMF  364 (488)
Q Consensus       290 ~~~~~~i~~~Grl~~-----~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~  364 (488)
                      ++++.++++.|+...     .+.+..+++++..+         ++++++++.++..+.++++.++|.+.|++++.   ++
T Consensus       265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~---~l  332 (441)
T 2yjn_A          265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV---------DAEIIATFDAQQLEGVANIPDNVRTVGFVPMH---AL  332 (441)
T ss_dssp             CSSCEEEEEC----------CCSTTTTHHHHHTS---------SSEEEECCCTTTTSSCSSCCSSEEECCSCCHH---HH
T ss_pred             CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC---------CCEEEEEECCcchhhhccCCCCEEEecCCCHH---HH
Confidence            444578889999875     37788888887543         46777766655444444566899999999853   56


Q ss_pred             HHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHHHHHHHHHHHhcCHH
Q 011355          365 YNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVESVKKALYGIWADGRE  437 (488)
Q Consensus       365 ~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~  437 (488)
                      |..||++|..    .| +.++.|||++|+|+|+....+    .. +.+.+.+.|+.++.   +.++++++|.+++++ ++
T Consensus       333 l~~ad~~V~~----~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~  405 (441)
T 2yjn_A          333 LPTCAATVHH----GG-PGSWHTAAIHGVPQVILPDGWDTGVRA-QRTQEFGAGIALPVPELTPDQLRESVKRVLDD-PA  405 (441)
T ss_dssp             GGGCSEEEEC----CC-HHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTTCCHHHHHHHHHHHHHC-HH
T ss_pred             HhhCCEEEEC----CC-HHHHHHHHHhCCCEEEeCCcccHHHHH-HHHHHcCCEEEcccccCCHHHHHHHHHHHhcC-HH
Confidence            8999999972    23 579999999999999998743    22 45667788998875   789999999999998 88


Q ss_pred             HHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          438 VLEKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       438 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      .++++++.+.+.... ...+.+++.+++++.
T Consensus       406 ~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~  435 (441)
T 2yjn_A          406 HRAGAARMRDDMLAE-PSPAEVVGICEELAA  435 (441)
T ss_dssp             HHHHHHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Confidence            888888888777654 688888888877754

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.70  E-value=8.1e-15  Score=144.19  Aligned_cols=160  Identities=18%  Similarity=0.144  Sum_probs=114.3

Q ss_pred             CCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEE-EEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcC
Q 011355          291 NRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVF-LVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAID  369 (488)
Q Consensus       291 ~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l-~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ad  369 (488)
                      +++.++++.|+.. .+..+.+.+++..+.+      .++++ +++|.+...+.++.+.++|.+.+++++.   ++|..||
T Consensus       254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~------~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~d  323 (424)
T 2iya_A          254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG------LDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQL---DILTKAS  323 (424)
T ss_dssp             SCCEEEEECCSSS-CCCHHHHHHHHHHHTT------CSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHH---HHHTTCS
T ss_pred             CCCEEEEEcCCCC-cchHHHHHHHHHHHhc------CCcEEEEEECCcCChHHhccCCCCeEEecCCCHH---HHHhhCC
Confidence            3447888899886 3333444444444432      34566 5578766555555567899999999844   7899999


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHH
Q 011355          370 IFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKK  442 (488)
Q Consensus       370 v~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~  442 (488)
                      ++|..+    | .++++||+++|+|+|+....+    .. +.+.+.+.|+.++.   +.++++++|.+++++ ++.++++
T Consensus       324 ~~v~~~----G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~  396 (424)
T 2iya_A          324 AFITHA----G-MGSTMEALSNAVPMVAVPQIAEQTMNA-ERIVELGLGRHIPRDQVTAEKLREAVLAVASD-PGVAERL  396 (424)
T ss_dssp             EEEECC----C-HHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCGGGCCHHHHHHHHHHHHHC-HHHHHHH
T ss_pred             EEEECC----c-hhHHHHHHHcCCCEEEecCccchHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcC-HHHHHHH
Confidence            998622    3 479999999999999998753    22 34566788888874   789999999999998 8877777


Q ss_pred             HHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          443 GLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       443 ~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      ++.+.+... ....+.+++.+++++.
T Consensus       397 ~~~~~~~~~-~~~~~~~~~~i~~~~~  421 (424)
T 2iya_A          397 AAVRQEIRE-AGGARAAADILEGILA  421 (424)
T ss_dssp             HHHHHHHHT-SCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence            777666543 3467777777776654

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.66  E-value=1.7e-14  Score=142.80  Aligned_cols=254  Identities=15%  Similarity=0.100  Sum_probs=167.5

Q ss_pred             CCcEEEeCCc---chHHhh--hccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESV---GLRHTR--ARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~---~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      ++||++--+.   ......  .+..| +-+++-|.+.-+                                 .+...|.+
T Consensus       349 ~IDILVdL~g~t~~~~i~~aa~RpAP-VQvs~lGyp~TT---------------------------------Gl~~iDY~  394 (631)
T 3q3e_A          349 GAAIFYMPSIGMDMTTIFASNTRLAP-IQAIALGHPATT---------------------------------HSDFIEYV  394 (631)
T ss_dssp             TCSEEEESCCSSSHHHHHHTTSCCSS-EEEEECSSCSCC---------------------------------CCTTCCEE
T ss_pred             CCCEEEECCCCCCchhHHHHhCCCch-heEeccCCCccc---------------------------------CcccCCEE
Confidence            8999987432   222222  34557 888887753321                                 12345666


Q ss_pred             EEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCC-CcEEEEEEeeeccccChHHHHHHHHH
Q 011355          239 VATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPEN-RSLVLGMAGRLVKDKGHPLMFEALKQ  317 (488)
Q Consensus       239 i~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~-~~~~i~~~Grl~~~Kg~~~ll~a~~~  317 (488)
                      ++-.....  -...|   .+++..+|+..-.  +.+...  ...|..++++.+ ..++++++++  ..|..+.+++++.+
T Consensus       395 i~D~~~~~--~~~~y---sEklirLP~~~~~--~~p~~~--~p~r~~~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~War  463 (631)
T 3q3e_A          395 IVEDDYVG--SEECF---SETLLRLPKDALP--YVPSAL--APEKVDYLLRENPEVVNIGIAST--TMKLNPYFLEALKA  463 (631)
T ss_dssp             EEEGGGCC--CGGGC---SSEEEEECTTSSC--CCCCTT--CCSSCCCCCCSCCSEEEEEEEEC--STTCCHHHHHHHHH
T ss_pred             EeCCCCCC--cccCc---eeeEEECCCCccc--cCCccc--CCccccccCCcCCCeEEEEECCc--cccCCHHHHHHHHH
Confidence            66332111  12223   5788888874211  111111  112456677764 3377777776  47999999999999


Q ss_pred             hHhhccCCCCCeEEE--EEeCC--CchhHHh-----hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHH
Q 011355          318 LLAENDTFRRSTVFL--VAGDG--PWGARYR-----DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEA  388 (488)
Q Consensus       318 l~~~~~~~~~~~~l~--ivG~g--~~~~~~~-----~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEA  388 (488)
                      +.++.    |+..+.  ++|++  ......+     .+.++|.|.|.++.++....|+.+|+++.|+.  .+.|++.+||
T Consensus       464 IL~~v----P~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfp--y~GgtTtlEA  537 (631)
T 3q3e_A          464 IRDRA----KVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFP--FGNTNGIIDM  537 (631)
T ss_dssp             HHHHC----SSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSS--SCCSHHHHHH
T ss_pred             HHHhC----CCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCc--ccCChHHHHH
Confidence            99998    776654  36743  3222222     24579999999999999999999999999985  4559999999


Q ss_pred             HHcCCcEEEeCCCCcccceee------cCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh--hCC--HHH
Q 011355          389 MLSGKPLMATRLASIVGSVIV------GTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLN--LFT--ATK  458 (488)
Q Consensus       389 ma~G~PVI~~~~~~~~~e~v~------~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~--~fs--~~~  458 (488)
                      |++|+|||+...++.. +.+.      -|-.++++..|.+++++...++.+| ++.+++++++.++....  .|+  .+.
T Consensus       538 LwmGVPVVTl~G~~~a-sRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D-~~~l~~LR~~Lr~~~~~spLFd~~~~~  615 (631)
T 3q3e_A          538 VTLGLVGVCKTGAEVH-EHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAEN-HQERLELRRYIIENNGLNTLFTGDPRP  615 (631)
T ss_dssp             HHTTCCEEEECCSSHH-HHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHC-HHHHHHHHHHHHHSCCHHHHTCSCCTH
T ss_pred             HHcCCCEEeccCCcHH-HHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHhhhCCCcchhHHH
Confidence            9999999998766554 2221      2444443333899999999999999 99999999999887644  344  244


Q ss_pred             HHHHHHHHHHHh
Q 011355          459 MAAAYERLFLCI  470 (488)
Q Consensus       459 ~~~~~~~~~~~~  470 (488)
                      +.+.|++++++.
T Consensus       616 ~e~~ye~~~~~w  627 (631)
T 3q3e_A          616 MGQVFLEKLNAF  627 (631)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            444444444443

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.58  E-value=2.5e-14  Score=139.58  Aligned_cols=161  Identities=17%  Similarity=0.149  Sum_probs=106.9

Q ss_pred             CCCCcEEEEEEeeeccccC-hHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHh
Q 011355          289 PENRSLVLGMAGRLVKDKG-HPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNA  367 (488)
Q Consensus       289 ~~~~~~~i~~~Grl~~~Kg-~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~  367 (488)
                      .++++.++++.|+....++ .+.+.+++..+.+      .+..+++.+.+...+....+.++|.+.+++|+.   ++|..
T Consensus       234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~------~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~---~lL~~  304 (400)
T 4amg_A          234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD------VDAEFVLTLGGGDLALLGELPANVRVVEWIPLG---ALLET  304 (400)
T ss_dssp             CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG------SSSEEEEECCTTCCCCCCCCCTTEEEECCCCHH---HHHTT
T ss_pred             cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc------cCceEEEEecCccccccccCCCCEEEEeecCHH---HHhhh
Confidence            3455577888898765543 3444455555543      355666666555455555677899999999865   56789


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcc---cceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHH
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIV---GSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGL  444 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~---~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~  444 (488)
                      +|++|.   + .| .+++.|||++|+|+|+....+-.   .+.+.+.+.|..++ +.+..+++|.++++| ++.+++.++
T Consensus       305 ~~~~v~---h-~G-~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~-~~~~~~~al~~lL~d-~~~r~~a~~  377 (400)
T 4amg_A          305 CDAIIH---H-GG-SGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAE-AGSLGAEQCRRLLDD-AGLREAALR  377 (400)
T ss_dssp             CSEEEE---C-CC-HHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECC-TTTCSHHHHHHHHHC-HHHHHHHHH
T ss_pred             hhheec---c-CC-ccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcC-CCCchHHHHHHHHcC-HHHHHHHHH
Confidence            999985   2 23 56899999999999997665411   03455667788877 445567899999998 877766655


Q ss_pred             HHHHHHhhhCCHHHHHHHHHHH
Q 011355          445 VARKRGLNLFTATKMAAAYERL  466 (488)
Q Consensus       445 ~a~~~~~~~fs~~~~~~~~~~~  466 (488)
                      -+.+.. ..-+....++.++++
T Consensus       378 l~~~~~-~~~~~~~~a~~le~l  398 (400)
T 4amg_A          378 VRQEMS-EMPPPAETAAXLVAL  398 (400)
T ss_dssp             HHHHHH-TSCCHHHHHHHHHHH
T ss_pred             HHHHHH-cCCCHHHHHHHHHHh
Confidence            555444 334777777777654

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.55  E-value=5.2e-13  Score=130.78  Aligned_cols=152  Identities=14%  Similarity=0.135  Sum_probs=103.4

Q ss_pred             CcEEEEEEeee-ccccChHHHHHHHHHhHhhccCCCCCeEEEE-EeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcC
Q 011355          292 RSLVLGMAGRL-VKDKGHPLMFEALKQLLAENDTFRRSTVFLV-AGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAID  369 (488)
Q Consensus       292 ~~~~i~~~Grl-~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ad  369 (488)
                      ++.++++.|+. ...+..+.++++++.+        + .++++ +|.+...  ...+.++|.+.|++++.+   +|.+||
T Consensus       238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~--------~-~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~~~---~l~~~d  303 (415)
T 1iir_A          238 PPPVYLGFGSLGAPADAVRVAIDAIRAH--------G-RRVILSRGWADLV--LPDDGADCFAIGEVNHQV---LFGRVA  303 (415)
T ss_dssp             SCCEEEECC---CCHHHHHHHHHHHHHT--------T-CCEEECTTCTTCC--CSSCGGGEEECSSCCHHH---HGGGSS
T ss_pred             CCeEEEeCCCCCCcHHHHHHHHHHHHHC--------C-CeEEEEeCCCccc--ccCCCCCEEEeCcCChHH---HHhhCC
Confidence            34678899998 4777777888888665        2 34444 4765432  233557899999999654   579999


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHH
Q 011355          370 IFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKK  442 (488)
Q Consensus       370 v~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~  442 (488)
                      ++|..    .| .++++|||++|+|+|+....+    .. +.+.+.+.|..++.   +.++++++|.++ ++ ++.++++
T Consensus       304 ~~v~~----~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~  375 (415)
T 1iir_A          304 AVIHH----GG-AGTTHVAARAGAPQILLPQMADQPYYA-GRVAELGVGVAHDGPIPTFDSLSAALATA-LT-PETHARA  375 (415)
T ss_dssp             EEEEC----CC-HHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS-HHHHHHH
T ss_pred             EEEeC----CC-hhHHHHHHHcCCCEEECCCCCccHHHH-HHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC-HHHHHHH
Confidence            99973    23 369999999999999987754    22 34566678888864   789999999999 87 7777766


Q ss_pred             HHHHHHHHhhhCCHHHHHHHHHHH
Q 011355          443 GLVARKRGLNLFTATKMAAAYERL  466 (488)
Q Consensus       443 ~~~a~~~~~~~fs~~~~~~~~~~~  466 (488)
                      ++.+.+... .-..+.+++.++++
T Consensus       376 ~~~~~~~~~-~~~~~~~~~~i~~~  398 (415)
T 1iir_A          376 TAVAGTIRT-DGAAVAARLLLDAV  398 (415)
T ss_dssp             HHHHHHSCS-CHHHHHHHHHHHHH
T ss_pred             HHHHHHHhh-cChHHHHHHHHHHH
Confidence            665554432 22344444444333

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.54  E-value=4.6e-13  Score=130.59  Aligned_cols=165  Identities=15%  Similarity=0.127  Sum_probs=108.3

Q ss_pred             hhhhhhhCCCCCCcEEEEEEeeec-cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCH
Q 011355          280 KDFKKKFGIPENRSLVLGMAGRLV-KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQ  358 (488)
Q Consensus       280 ~~~r~~~~i~~~~~~~i~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~  358 (488)
                      .++++.++  ++++.++++.|+.. +.+.+..+++++..+         ++++++.++.+..+. .+..++|.+.++++.
T Consensus       211 ~~l~~~l~--~~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---------~~~vv~~~g~~~~~~-~~~~~~v~~~~~~~~  278 (404)
T 3h4t_A          211 AELEGFLR--AGSPPVYVGFGSGPAPAEAARVAIEAVRAQ---------GRRVVLSSGWAGLGR-IDEGDDCLVVGEVNH  278 (404)
T ss_dssp             HHHHHHHH--TSSCCEEECCTTSCCCTTHHHHHHHHHHHT---------TCCEEEECTTTTCCC-SSCCTTEEEESSCCH
T ss_pred             HHHHHHHh--cCCCeEEEECCCCCCcHHHHHHHHHHHHhC---------CCEEEEEeCCccccc-ccCCCCEEEecCCCH
Confidence            34444443  34447788889887 556566677776654         345565543322221 234689999999985


Q ss_pred             HHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeecCCceeEeCC---CHHHHHHHHHHHH
Q 011355          359 TRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVGTDMGYLFSP---QVESVKKALYGIW  432 (488)
Q Consensus       359 ~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~~~g~l~~~---d~~~la~~i~~ll  432 (488)
                      .   +++..||++|..+    | ..++.||+++|+|+|+....+-..   +.+.+.+.|..++.   +.+++++++.+++
T Consensus       279 ~---~ll~~~d~~v~~g----G-~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll  350 (404)
T 3h4t_A          279 Q---VLFGRVAAVVHHG----G-AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATAL  350 (404)
T ss_dssp             H---HHGGGSSEEEECC----C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHT
T ss_pred             H---HHHhhCcEEEECC----c-HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHh
Confidence            4   5678999999733    2 368999999999999987654210   23556677888764   7899999999998


Q ss_pred             hcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          433 ADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       433 ~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      +  ++.++++.+.+.....  -..+.+++.+++++.
T Consensus       351 ~--~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~  382 (404)
T 3h4t_A          351 T--PGIRARAAAVAGTIRT--DGTTVAAKLLLEAIS  382 (404)
T ss_dssp             S--HHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHH
T ss_pred             C--HHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHh
Confidence            6  5666666555544432  355666666655543

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.43  E-value=4.2e-12  Score=124.39  Aligned_cols=137  Identities=13%  Similarity=0.094  Sum_probs=96.3

Q ss_pred             cEEEEEEeeec---cccChHHHHHHHHHhHhhccCCCCCeEEEEE-eCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhc
Q 011355          293 SLVLGMAGRLV---KDKGHPLMFEALKQLLAENDTFRRSTVFLVA-GDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAI  368 (488)
Q Consensus       293 ~~~i~~~Grl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a  368 (488)
                      +.++++.|+..   ..+..+.+++++..+         +.+++++ |.+...  ...+.++|.+.++++..   ++|..|
T Consensus       238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~~---~ll~~~  303 (416)
T 1rrv_A          238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---------GRRVILSRGWTELV--LPDDRDDCFAIDEVNFQ---ALFRRV  303 (416)
T ss_dssp             CCEEECCTTCCSHHHHHHHHHHHHHHHHT---------TCCEEEECTTTTCC--CSCCCTTEEEESSCCHH---HHGGGS
T ss_pred             CeEEEecCCCCccChHHHHHHHHHHHHHC---------CCeEEEEeCCcccc--ccCCCCCEEEeccCChH---HHhccC
Confidence            46777889874   456666677776654         2445544 765432  23456799999999854   467999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcc---cceeecCCceeEeCC---CHHHHHHHHHHHHhcCHHHHHHH
Q 011355          369 DIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIV---GSVIVGTDMGYLFSP---QVESVKKALYGIWADGREVLEKK  442 (488)
Q Consensus       369 dv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~---~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~  442 (488)
                      |++|.   + .| ..++.||+++|+|+|+....+-.   .+.+.+.+.|..++.   +.++++++|.++ +| ++.++++
T Consensus       304 d~~v~---~-~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~  376 (416)
T 1rrv_A          304 AAVIH---H-GS-AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LA-PETRARA  376 (416)
T ss_dssp             SEEEE---C-CC-HHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TS-HHHHHHH
T ss_pred             CEEEe---c-CC-hhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hC-HHHHHHH
Confidence            99997   2 23 46999999999999998764411   034566678888863   789999999999 87 7777666


Q ss_pred             HHHHHHHH
Q 011355          443 GLVARKRG  450 (488)
Q Consensus       443 ~~~a~~~~  450 (488)
                      ++.+++..
T Consensus       377 ~~~~~~~~  384 (416)
T 1rrv_A          377 EAVAGMVL  384 (416)
T ss_dssp             HHHTTTCC
T ss_pred             HHHHHHHh
Confidence            65554433

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=99.39  E-value=6e-11  Score=123.20  Aligned_cols=183  Identities=15%  Similarity=0.210  Sum_probs=140.9

Q ss_pred             hhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch-hHHhh----h---CCcEEE
Q 011355          281 DFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG-ARYRD----L---GTNVIV  352 (488)
Q Consensus       281 ~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~-~~~~~----l---~~~V~~  352 (488)
                      ..|+.+|+|++. ++++++.++  .|=.+..++++.++.++.    |+-+|++...+... +.+++    .   .++|+|
T Consensus       512 ~~R~~~gLp~~~-v~f~~fN~~--~Ki~p~~~~~W~~IL~~v----P~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f  584 (723)
T 4gyw_A          512 TTRSQYGLPEDA-IVYCNFNQL--YKIDPSTLQMWANILKRV----PNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIF  584 (723)
T ss_dssp             EEGGGGTCCTTS-EEEECCSCG--GGCCHHHHHHHHHHHHHC----SSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEE
T ss_pred             cchhhcCCCCCC-EEEEeCCcc--ccCCHHHHHHHHHHHHhC----CCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEE
Confidence            467889999888 777766655  666788999999999999    99999988765432 22222    2   278999


Q ss_pred             eCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc----ceeec-CCceeEeCCCHHHHHHH
Q 011355          353 LGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG----SVIVG-TDMGYLFSPQVESVKKA  427 (488)
Q Consensus       353 ~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~----e~v~~-~~~g~l~~~d~~~la~~  427 (488)
                      .+.++.++....|..+|+++-|..+  +-+.+.+||+.+|+|||+-.-.....    .++.. |-.-+++. |.++..+.
T Consensus       585 ~~~~~~~~~l~~~~~~Di~LDt~p~--~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~-~~~~Y~~~  661 (723)
T 4gyw_A          585 SPVAPKEEHVRRGQLADVCLDTPLC--NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK-NRQEYEDI  661 (723)
T ss_dssp             EECCCHHHHHHHGGGCSEEECCSSS--CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS-SHHHHHHH
T ss_pred             CCCCCHHHHHHHhCCCeEEeCCCCc--CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC-CHHHHHHH
Confidence            9999999999999999999998754  45899999999999999865433332    11111 12223333 89999999


Q ss_pred             HHHHHhcCHHHHHHHHHHHHHHHhh--hCCHHHHHHHHHHHHHHhhccc
Q 011355          428 LYGIWADGREVLEKKGLVARKRGLN--LFTATKMAAAYERLFLCISNDE  474 (488)
Q Consensus       428 i~~ll~~~~~~~~~~~~~a~~~~~~--~fs~~~~~~~~~~~~~~~~~~~  474 (488)
                      ..++.+| ++.+..++++-++....  -|+.+..++.+++.|+++-...
T Consensus       662 a~~la~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~  709 (723)
T 4gyw_A          662 AVKLGTD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY  709 (723)
T ss_dssp             HHHHHHC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence            9999999 99999998888777654  5899999999999998876543

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.36  E-value=2.3e-12  Score=109.37  Aligned_cols=139  Identities=17%  Similarity=0.191  Sum_probs=99.6

Q ss_pred             hhhhhhCCCCCCcEEEEEEeeec---cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccC
Q 011355          281 DFKKKFGIPENRSLVLGMAGRLV---KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLD  357 (488)
Q Consensus       281 ~~r~~~~i~~~~~~~i~~~Grl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~  357 (488)
                      ++.+.+.-.++++.+++++|+..   +.|++..+++++..+         +.+++++++++..+   .+.++|.+.|+++
T Consensus        10 ~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~~~~~---~~~~~v~~~~~~~   77 (170)
T 2o6l_A           10 EMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQI---------PQKVLWRFDGNKPD---TLGLNTRLYKWIP   77 (170)
T ss_dssp             HHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTS---------SSEEEEECCSSCCT---TCCTTEEEESSCC
T ss_pred             HHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhC---------CCeEEEEECCcCcc---cCCCcEEEecCCC
Confidence            33333332334447888999985   566777777776433         35677766554322   3567999999999


Q ss_pred             HHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHHHHHHHHH
Q 011355          358 QTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVESVKKALYG  430 (488)
Q Consensus       358 ~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~la~~i~~  430 (488)
                      ++++..+ ..||++|..    .| +.+++|||++|+|+|+....+    .. +.+.+.+.|+.+++   +.++++++|.+
T Consensus        78 ~~~~l~~-~~ad~~I~~----~G-~~t~~Ea~~~G~P~i~~p~~~~Q~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~  150 (170)
T 2o6l_A           78 QNDLLGH-PKTRAFITH----GG-ANGIYEAIYHGIPMVGIPLFADQPDNI-AHMKARGAAVRVDFNTMSSTDLLNALKR  150 (170)
T ss_dssp             HHHHHTS-TTEEEEEEC----CC-HHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHTTTSEEECCTTTCCHHHHHHHHHH
T ss_pred             HHHHhcC-CCcCEEEEc----CC-ccHHHHHHHcCCCEEeccchhhHHHHH-HHHHHcCCeEEeccccCCHHHHHHHHHH
Confidence            7655433 999999973    23 589999999999999998753    22 45677889999875   78999999999


Q ss_pred             HHhcCHHHH
Q 011355          431 IWADGREVL  439 (488)
Q Consensus       431 ll~~~~~~~  439 (488)
                      ++++ ++.+
T Consensus       151 ll~~-~~~~  158 (170)
T 2o6l_A          151 VIND-PSYK  158 (170)
T ss_dssp             HHHC-HHHH
T ss_pred             HHcC-HHHH
Confidence            9998 6543

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=98.96  E-value=9.9e-09  Score=104.00  Aligned_cols=234  Identities=12%  Similarity=0.128  Sum_probs=159.0

Q ss_pred             cCCccEEEEcChhhHHHHHH-----HhcCCCCcEEEecCCccCCCc----CCC---------------------------
Q 011355          232 FPKYAHHVATSDHCGDVLKR-----IYMIPEERVHVILNGVDEEVF----KPD---------------------------  275 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~-----~~g~~~~~i~vi~ngvd~~~~----~~~---------------------------  275 (488)
                      +..++.|-++|+...+.++.     .+..-+.++.-|-|||+....    .|.                           
T Consensus       400 i~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~  479 (796)
T 2c4m_A          400 CYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSY  479 (796)
T ss_dssp             HHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGG
T ss_pred             HHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhh
Confidence            46789999999998888874     233446789999999988766    111                           


Q ss_pred             ccc--------------chh----hhhhhCCCCC-CcEEEEEEeeeccccChHH-HHHHHHHhHh--hccC-CCCCeEEE
Q 011355          276 VAM--------------GKD----FKKKFGIPEN-RSLVLGMAGRLVKDKGHPL-MFEALKQLLA--ENDT-FRRSTVFL  332 (488)
Q Consensus       276 ~~~--------------~~~----~r~~~~i~~~-~~~~i~~~Grl~~~Kg~~~-ll~a~~~l~~--~~~~-~~~~~~l~  332 (488)
                      ..+              +..    ++++.|++-+ +.+.++++.|+..+|++++ ++..+..+.+  ..++ -..++.++
T Consensus       480 ~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~I  559 (796)
T 2c4m_A          480 ADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVI  559 (796)
T ss_dssp             GGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEE
Confidence            000              112    3556666432 2388999999999999999 8888877764  2200 00258999


Q ss_pred             EEeCCCch-hH-------Hhh----------hCC--cEEEeCccCHHHHHHHHHhcCEEEeCCCC-CCCCChHHHHHHHc
Q 011355          333 VAGDGPWG-AR-------YRD----------LGT--NVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLS  391 (488)
Q Consensus       333 ivG~g~~~-~~-------~~~----------l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~~-~eg~~~~~lEAma~  391 (488)
                      +.|++... +.       +.+          ..+  +|.|+...+.+--..++.+||++++||+. .|..|+.-+=+|..
T Consensus       560 f~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N  639 (796)
T 2c4m_A          560 FGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN  639 (796)
T ss_dssp             EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT
T ss_pred             EEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence            99986422 11       111          235  79998877777788899999999999982 49999999999999


Q ss_pred             CCcEEEeCCCCcccceeec--CCceeEeCC---CHHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Q 011355          392 GKPLMATRLASIVGSVIVG--TDMGYLFSP---QVESVKKA---LYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAY  463 (488)
Q Consensus       392 G~PVI~~~~~~~~~e~v~~--~~~g~l~~~---d~~~la~~---i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~  463 (488)
                      |.+.|++--|... |+.++  .++|++|..   +++++...   ..-.-.+ + .++++-.+   .....|||..- ..|
T Consensus       640 GaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~-~-~~~~vvd~---~~~g~fs~~~~-~~y  712 (796)
T 2c4m_A          640 GALTLGTMDGANV-EIVDSVGEENAYIFGARVEELPALRESYKPYELYETV-P-GLKRALDA---LDNGTLNDNNS-GLF  712 (796)
T ss_dssp             TCEEEEESSTHHH-HHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHS-T-THHHHHHT---TTSSSSCCTTC-CHH
T ss_pred             CCeEEeccCCeEe-ehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcC-H-HHHHHHHH---HHcCCCCCCCH-HHH
Confidence            9999988777766 55433  479999986   34444432   1111122 2 22222222   23456888776 779


Q ss_pred             HHHHHHhhc
Q 011355          464 ERLFLCISN  472 (488)
Q Consensus       464 ~~~~~~~~~  472 (488)
                      .++|+.+++
T Consensus       713 ~~Ly~~L~~  721 (796)
T 2c4m_A          713 YDLKHSLIH  721 (796)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHHh
Confidence            999999864

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=98.90  E-value=1.4e-08  Score=102.91  Aligned_cols=235  Identities=17%  Similarity=0.176  Sum_probs=161.3

Q ss_pred             cCCccEEEEcChhhHHHHHH-----HhcCCCCcEEEecCCccCCCc----CCC--------------------------c
Q 011355          232 FPKYAHHVATSDHCGDVLKR-----IYMIPEERVHVILNGVDEEVF----KPD--------------------------V  276 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~-----~~g~~~~~i~vi~ngvd~~~~----~~~--------------------------~  276 (488)
                      +..++.|-++|+...+.++.     .+..-+.++.-|-|||+....    .|.                          .
T Consensus       411 i~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~  490 (796)
T 1l5w_A          411 VVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFA  490 (796)
T ss_dssp             HHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGG
T ss_pred             HHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcC
Confidence            46789999999998888864     233346789999999976433    110                          0


Q ss_pred             c----------c----chh----hhhhhCCCCC-CcEEEEEEeeeccccChHH-HHHHHHHhHh--hccC-CCCCeEEEE
Q 011355          277 A----------M----GKD----FKKKFGIPEN-RSLVLGMAGRLVKDKGHPL-MFEALKQLLA--ENDT-FRRSTVFLV  333 (488)
Q Consensus       277 ~----------~----~~~----~r~~~~i~~~-~~~~i~~~Grl~~~Kg~~~-ll~a~~~l~~--~~~~-~~~~~~l~i  333 (488)
                      .          .    +..    +++++|++-+ +.+.++++.|+..+|++++ ++..+..+.+  ..++ -..++.+++
T Consensus       491 ~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If  570 (796)
T 1l5w_A          491 DDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLF  570 (796)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEE
Confidence            0          0    112    3566776533 2388999999999999999 8888877754  1200 002589999


Q ss_pred             EeCCCch-hH-------Hhh----------hCC--cEEEeCccCHHHHHHHHHhcCEEEeCCCC-CCCCChHHHHHHHcC
Q 011355          334 AGDGPWG-AR-------YRD----------LGT--NVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSG  392 (488)
Q Consensus       334 vG~g~~~-~~-------~~~----------l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~~-~eg~~~~~lEAma~G  392 (488)
                      .|++... +.       +.+          ..+  +|.|+...+.+--..++.+||++++||+. .|..|+.-+=+|..|
T Consensus       571 ~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG  650 (796)
T 1l5w_A          571 GAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG  650 (796)
T ss_dssp             ECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTT
T ss_pred             EecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence            9986422 11       111          224  79998877777778899999999999982 499999999999999


Q ss_pred             CcEEEeCCCCcccceeec--CCceeEeCCCHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 011355          393 KPLMATRLASIVGSVIVG--TDMGYLFSPQVESVKKALY------GIWADGREVLEKKGLVARKRGLNLFTATKMAAAYE  464 (488)
Q Consensus       393 ~PVI~~~~~~~~~e~v~~--~~~g~l~~~d~~~la~~i~------~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~  464 (488)
                      .+.|++--|... |+.++  .++|++|..+++++.+.-.      .+..+++ .++++-.++.   ...|||..- ..|.
T Consensus       651 aL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~---~g~fs~~~~-~~y~  724 (796)
T 1l5w_A          651 ALTVGTLDGANV-EIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELE---SGKYSDGDK-HAFD  724 (796)
T ss_dssp             CEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHH---HTTTTTTCT-TTTH
T ss_pred             CeeecCcCCeee-ehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHH---cCCCCCCcH-HHHH
Confidence            999988777776 55433  4799999877777663222      2222214 3444444433   456999875 7799


Q ss_pred             HHHHHhhc
Q 011355          465 RLFLCISN  472 (488)
Q Consensus       465 ~~~~~~~~  472 (488)
                      ++|+.+++
T Consensus       725 ~Ly~~L~~  732 (796)
T 1l5w_A          725 QMLHSIGK  732 (796)
T ss_dssp             HHHHHTST
T ss_pred             HHHHHHhc
Confidence            99998865

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=98.90  E-value=3.3e-08  Score=100.65  Aligned_cols=234  Identities=15%  Similarity=0.180  Sum_probs=159.8

Q ss_pred             hcCCccEEEEcChhhHHHHHH-----HhcCCCCcEEEecCCccCCCc----CCC--------------------------
Q 011355          231 FFPKYAHHVATSDHCGDVLKR-----IYMIPEERVHVILNGVDEEVF----KPD--------------------------  275 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~-----~~g~~~~~i~vi~ngvd~~~~----~~~--------------------------  275 (488)
                      .+..++.|-++|+...+.++.     .+...+.++.-|-|||+....    .|.                          
T Consensus       434 ai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y  513 (824)
T 2gj4_A          434 CIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSY  513 (824)
T ss_dssp             HHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGG
T ss_pred             HHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhc
Confidence            346888999999988887753     123346799999999987765    110                          


Q ss_pred             ---cc-----------cchh----hhhhhCCCCC-CcEEEEEEeeeccccChHHH-HHHHHHhHh--hccCCCC--CeEE
Q 011355          276 ---VA-----------MGKD----FKKKFGIPEN-RSLVLGMAGRLVKDKGHPLM-FEALKQLLA--ENDTFRR--STVF  331 (488)
Q Consensus       276 ---~~-----------~~~~----~r~~~~i~~~-~~~~i~~~Grl~~~Kg~~~l-l~a~~~l~~--~~~~~~~--~~~l  331 (488)
                         ..           .+..    +.++.|++-+ +.+.++++.|+..+|+++++ +..+..+.+  ..++ +|  ++.+
T Consensus       514 ~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~-~~~~p~q~  592 (824)
T 2gj4_A          514 VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPN-KFVVPRTV  592 (824)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTT-SCCCCEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCC-CCCCCEEE
Confidence               00           0011    3445676432 23889999999999999997 787777742  2310 01  6799


Q ss_pred             EEEeCCCch-hHH-------hhh----------CC--cEEEeCccCHHHHHHHHHhcCEEEeCCCC-CCCCChHHHHHHH
Q 011355          332 LVAGDGPWG-ARY-------RDL----------GT--NVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAML  390 (488)
Q Consensus       332 ~ivG~g~~~-~~~-------~~l----------~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~~-~eg~~~~~lEAma  390 (488)
                      ++.|++... +..       .++          .+  +|.|+...+.+--..++.+||++++||+. .|..|+.-+=||.
T Consensus       593 If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKaml  672 (824)
T 2gj4_A          593 MIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFML  672 (824)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHH
T ss_pred             EEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH
Confidence            999986422 111       111          34  79998877777778899999999999982 4999999999999


Q ss_pred             cCCcEEEeCCCCcccceee--cCCceeEeCCCHHHHHHHH-------HHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHH
Q 011355          391 SGKPLMATRLASIVGSVIV--GTDMGYLFSPQVESVKKAL-------YGIWADGREVLEKKGLVARKRGLNLFTATKMAA  461 (488)
Q Consensus       391 ~G~PVI~~~~~~~~~e~v~--~~~~g~l~~~d~~~la~~i-------~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~  461 (488)
                      .|.+.|++--|... |+.+  ..++|++|...++++ ..+       ..+.+. .+.++++-++.   +...|+|..- .
T Consensus       673 NGaLtigtlDGanv-Ei~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~-~~~l~~v~d~i---~~g~fs~~~~-~  745 (824)
T 2gj4_A          673 NGALTIGTMDGANV-EMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR-IPELRQIIEQL---SSGFFSPKQP-D  745 (824)
T ss_dssp             TTCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH-CHHHHHHHHHH---HHTTTCTTST-T
T ss_pred             cCceEEEEecCccc-hhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC-CHHHHHHHHHH---HhCCCCCCCh-H
Confidence            99999998777665 5443  457899998766666 333       233444 23344443443   3456998776 6


Q ss_pred             HHHHHHHHhhc
Q 011355          462 AYERLFLCISN  472 (488)
Q Consensus       462 ~~~~~~~~~~~  472 (488)
                      .|.++|+++++
T Consensus       746 ~y~~ly~~l~~  756 (824)
T 2gj4_A          746 LFKDIVNMLMH  756 (824)
T ss_dssp             TTHHHHHHHHH
T ss_pred             HHHHHHHHHHc
Confidence            78888888764

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=98.82  E-value=4.4e-06  Score=82.39  Aligned_cols=191  Identities=15%  Similarity=0.061  Sum_probs=107.3

Q ss_pred             hhcCCccEEEEcChhhHH-HHHHHhc--C-CCCcEEEecCCccCCCcCCCc---ccchhhhhhhCCCCCCcEEEEEEeee
Q 011355          230 KFFPKYAHHVATSDHCGD-VLKRIYM--I-PEERVHVILNGVDEEVFKPDV---AMGKDFKKKFGIPENRSLVLGMAGRL  302 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~-~~~~~~g--~-~~~~i~vi~ngvd~~~~~~~~---~~~~~~r~~~~i~~~~~~~i~~~Grl  302 (488)
                      ..+++++.+++.|-...+ .....+.  . +..++..|..-.....-....   ....++.+.++-.++++.+++..|+.
T Consensus       207 ~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~  286 (463)
T 2acv_A          207 ERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSM  286 (463)
T ss_dssp             HHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSS
T ss_pred             HhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccc
Confidence            345788888776643332 2222111  1 123566665322111000000   11234445555444555788888987


Q ss_pred             ccccChHHHHHHHHHhHhhccCCCCCeEEE-EEeCC--CchhHH-hhh--CCcEEEeCccCHHHHHHHHH--hcCEEEeC
Q 011355          303 VKDKGHPLMFEALKQLLAENDTFRRSTVFL-VAGDG--PWGARY-RDL--GTNVIVLGPLDQTRLAMFYN--AIDIFVNP  374 (488)
Q Consensus       303 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~-ivG~g--~~~~~~-~~l--~~~V~~~g~v~~~~l~~~~~--~adv~v~p  374 (488)
                      ...-+.+.+.+.+..+.+.      +.+++ ++|.+  ...+.+ +..  .+++.+.+++++.   .+|.  ++|+||. 
T Consensus       287 ~~~~~~~~~~~~~~~l~~~------~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fvt-  356 (463)
T 2acv_A          287 GVSFGPSQIREIALGLKHS------GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQV---EVLAHKAIGGFVS-  356 (463)
T ss_dssp             CCCCCHHHHHHHHHHHHHH------TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHH---HHHHSTTEEEEEE-
T ss_pred             cccCCHHHHHHHHHHHHhC------CCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHH---HHhCCCccCeEEe-
Confidence            6222333344444444332      34444 45543  111222 233  5789999999854   4676  6778886 


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ce-eecCCceeEe-C-------C-CHHHHHHHHHHHHhc
Q 011355          375 TLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SV-IVGTDMGYLF-S-------P-QVESVKKALYGIWAD  434 (488)
Q Consensus       375 s~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~-v~~~~~g~l~-~-------~-d~~~la~~i~~ll~~  434 (488)
                        + -| .++++||+++|+|+|+-...+-..   .. ++..+.|..+ .       . +.++++++|.+++++
T Consensus       357 --h-~G-~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~  425 (463)
T 2acv_A          357 --H-CG-WNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK  425 (463)
T ss_dssp             --C-CC-HHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT
T ss_pred             --c-CC-chhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhc
Confidence              3 34 569999999999999987643210   23 4566788887 2       4 789999999999964

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=98.78  E-value=3.6e-06  Score=83.56  Aligned_cols=144  Identities=15%  Similarity=0.102  Sum_probs=92.1

Q ss_pred             CCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEE-EeCCC-------c-hhHHhhhCCcEEEeCccCHHHH
Q 011355          291 NRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLV-AGDGP-------W-GARYRDLGTNVIVLGPLDQTRL  361 (488)
Q Consensus       291 ~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~g~-------~-~~~~~~l~~~V~~~g~v~~~~l  361 (488)
                      +++.+++..|+... ...+.+.+.+..+.+      .+.++++ +|...       . ....+...+++.+.+++++.  
T Consensus       294 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~--  364 (482)
T 2pq6_A          294 PGSVVYVNFGSTTV-MTPEQLLEFAWGLAN------CKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD--  364 (482)
T ss_dssp             TTCEEEEECCSSSC-CCHHHHHHHHHHHHH------TTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH--
T ss_pred             CCceEEEecCCccc-CCHHHHHHHHHHHHh------cCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHH--
Confidence            44477788888653 233444444444433      2345544 44321       1 12223356899999999954  


Q ss_pred             HHHHHhcCE--EEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceee-cCCceeEeCC--CHHHHHHHHHHHHh
Q 011355          362 AMFYNAIDI--FVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIV-GTDMGYLFSP--QVESVKKALYGIWA  433 (488)
Q Consensus       362 ~~~~~~adv--~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~-~~~~g~l~~~--d~~~la~~i~~ll~  433 (488)
                       ++|+.+++  ||.   + .| .+++.||+++|+|+|+-...+-..   ..+. +-+.|..++.  +.+++.++|.+++.
T Consensus       365 -~~L~h~~~~~~vt---h-~G-~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~  438 (482)
T 2pq6_A          365 -KVLNHPSIGGFLT---H-CG-WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIA  438 (482)
T ss_dssp             -HHHTSTTEEEEEE---C-CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHT
T ss_pred             -HHhcCCCCCEEEe---c-CC-cchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHc
Confidence             47877666  554   2 34 569999999999999987654210   2243 5678887764  89999999999998


Q ss_pred             cCHHHHHHHHHHHHHHHh
Q 011355          434 DGREVLEKKGLVARKRGL  451 (488)
Q Consensus       434 ~~~~~~~~~~~~a~~~~~  451 (488)
                      + ++ .+++++++++...
T Consensus       439 ~-~~-~~~~r~~a~~l~~  454 (482)
T 2pq6_A          439 G-DK-GKKMKQKAMELKK  454 (482)
T ss_dssp             S-HH-HHHHHHHHHHHHH
T ss_pred             C-Cc-HHHHHHHHHHHHH
Confidence            8 65 3566666665553

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=98.66  E-value=3.5e-06  Score=79.95  Aligned_cols=109  Identities=17%  Similarity=0.136  Sum_probs=77.1

Q ss_pred             cchhhhhhhCCCCCCcEEEEEEee-eccccChH--HHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhC-------
Q 011355          278 MGKDFKKKFGIPENRSLVLGMAGR-LVKDKGHP--LMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLG-------  347 (488)
Q Consensus       278 ~~~~~r~~~~i~~~~~~~i~~~Gr-l~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~-------  347 (488)
                      ....++++++++.+++++++..|. ..+.|...  .+.+++..+.++      ++++++.|...+.+..+++.       
T Consensus       166 ~~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~------~~~vvl~g~~~e~~~~~~i~~~~~~~~  239 (348)
T 1psw_A          166 EKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE------GYQVVLFGSAKDHEAGNEILAALNTEQ  239 (348)
T ss_dssp             HHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT------TCEEEECCCGGGHHHHHHHHTTSCHHH
T ss_pred             HHHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC------CCeEEEEeChhhHHHHHHHHHhhhhcc
Confidence            345567788876555577778887 55667664  778888777653      56788888665554444321       


Q ss_pred             -Cc-EEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEe
Q 011355          348 -TN-VIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT  398 (488)
Q Consensus       348 -~~-V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~  398 (488)
                       .+ +.+.|..+-.|+..+++.||++|...    + | .+-.|.++|+|+|+-
T Consensus       240 ~~~~~~l~g~~sl~e~~ali~~a~l~I~~D----s-g-~~HlAaa~g~P~v~l  286 (348)
T 1psw_A          240 QAWCRNLAGETQLDQAVILIAACKAIVTND----S-G-LMHVAAALNRPLVAL  286 (348)
T ss_dssp             HTTEEECTTTSCHHHHHHHHHTSSEEEEES----S-H-HHHHHHHTTCCEEEE
T ss_pred             ccceEeccCcCCHHHHHHHHHhCCEEEecC----C-H-HHHHHHHcCCCEEEE
Confidence             23 46678888899999999999999854    1 2 344499999999985

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=98.63  E-value=3.8e-05  Score=74.93  Aligned_cols=205  Identities=15%  Similarity=-0.004  Sum_probs=116.7

Q ss_pred             hhcCCccEEEEcChhhHHH-HHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeeccccCh
Q 011355          230 KFFPKYAHHVATSDHCGDV-LKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGH  308 (488)
Q Consensus       230 ~~~~~~d~ii~~S~~~~~~-~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~  308 (488)
                      ..+.+++.+++.|-...+. ..+.+.-...++..|+.-..... ........+..+.++-.++++.+++..|+.... ..
T Consensus       211 ~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vGPl~~~~~-~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~-~~  288 (454)
T 3hbf_A          211 LELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFNLTTP-QRKVSDEHGCLEWLDQHENSSVVYISFGSVVTP-PP  288 (454)
T ss_dssp             HHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCCHHHHSC-CSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCC-CH
T ss_pred             HhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEECCcccccc-cccccchHHHHHHHhcCCCCceEEEecCCCCcC-CH
Confidence            4467899999998665432 11111111235555553221110 011111234455555444555788888887643 23


Q ss_pred             HHHHHHHHHhHhhccCCCCCeEEE-EEeCCCch----hHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCCh
Q 011355          309 PLMFEALKQLLAENDTFRRSTVFL-VAGDGPWG----ARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDH  383 (488)
Q Consensus       309 ~~ll~a~~~l~~~~~~~~~~~~l~-ivG~g~~~----~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~  383 (488)
                      +.+.+.+..+.+.      +.+++ .+|.+...    ...+...+++.+.+++|+   ..+++.+++.++-++  .| -+
T Consensus       289 ~~~~el~~~l~~~------~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq---~~vL~h~~v~~fvtH--~G-~~  356 (454)
T 3hbf_A          289 HELTALAESLEEC------GFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQ---VEILKHSSVGVFLTH--SG-WN  356 (454)
T ss_dssp             HHHHHHHHHHHHH------CCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCH---HHHHHSTTEEEEEEC--CC-HH
T ss_pred             HHHHHHHHHHHhC------CCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCH---HHHHhhcCcCeEEec--CC-cc
Confidence            4444444444432      23343 44543211    112334578999999995   378889995444342  34 46


Q ss_pred             HHHHHHHcCCcEEEeCCCCcc---cceeecC-CceeEeCC---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011355          384 TVLEAMLSGKPLMATRLASIV---GSVIVGT-DMGYLFSP---QVESVKKALYGIWADGREVLEKKGLVARKRG  450 (488)
Q Consensus       384 ~~lEAma~G~PVI~~~~~~~~---~e~v~~~-~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~  450 (488)
                      +++||+++|+|+|+-...+-.   ...+.+. +.|..++.   +.++++++|.+++++ + ..++|++++++..
T Consensus       357 S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~-~-~~~~~r~~a~~l~  428 (454)
T 3hbf_A          357 SVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSS-E-KGGIMRQKIVKLK  428 (454)
T ss_dssp             HHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSS-H-HHHHHHHHHHHHH
T ss_pred             hHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCC-C-hHHHHHHHHHHHH
Confidence            999999999999998764311   0234553 77887764   789999999999987 3 2345555554443

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=98.62  E-value=8.2e-06  Score=80.19  Aligned_cols=197  Identities=15%  Similarity=0.028  Sum_probs=114.6

Q ss_pred             cCCccEEEEcChhhHHH-----HHHHhcCCCCcEEEecCCccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecccc
Q 011355          232 FPKYAHHVATSDHCGDV-----LKRIYMIPEERVHVILNGVDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK  306 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~-----~~~~~g~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~K  306 (488)
                      .++++.+++.|....+.     ++..+    .++..|+.-..... ........++.+.++..++++.+++..|+.... 
T Consensus       211 ~~~~~~vl~ns~~~le~~~~~~~~~~~----~~~~~vGpl~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~-  284 (456)
T 2c1x_A          211 LPKATAVFINSFEELDDSLTNDLKSKL----KTYLNIGPFNLITP-PPVVPNTTGCLQWLKERKPTSVVYISFGTVTTP-  284 (456)
T ss_dssp             GGGSSCEEESSCGGGCHHHHHHHHHHS----SCEEECCCHHHHC----------CHHHHHHTSCTTCEEEEECCSSCCC-
T ss_pred             hhhCCEEEECChHHHhHHHHHHHHhcC----CCEEEecCcccCcc-cccccchhhHHHHHhcCCCcceEEEecCccccC-
Confidence            46789999988654443     23321    25555553211100 000001122344444444555788888887643 


Q ss_pred             ChHHHHHHHHHhHhhccCCCCCeE-EEEEeCCCch----hHHhhhCCcEEEeCccCHHHHHHHHH--hcCEEEeCCCCCC
Q 011355          307 GHPLMFEALKQLLAENDTFRRSTV-FLVAGDGPWG----ARYRDLGTNVIVLGPLDQTRLAMFYN--AIDIFVNPTLRAQ  379 (488)
Q Consensus       307 g~~~ll~a~~~l~~~~~~~~~~~~-l~ivG~g~~~----~~~~~l~~~V~~~g~v~~~~l~~~~~--~adv~v~ps~~~e  379 (488)
                      ..+.+.+.+..+.+.      +.+ +..+|.....    ...+...+++.+.+++++.   ++|.  ++|+||.   + .
T Consensus       285 ~~~~~~~~~~~l~~~------~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fvt---h-~  351 (456)
T 2c1x_A          285 PPAEVVALSEALEAS------RVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA---EVLAHEAVGAFVT---H-C  351 (456)
T ss_dssp             CHHHHHHHHHHHHHH------TCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH---HHHTSTTEEEEEE---C-C
T ss_pred             CHHHHHHHHHHHHhc------CCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH---HHhcCCcCCEEEe---c-C
Confidence            234444444444332      233 3445543211    1122346789999999853   5788  6778886   3 3


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCCccc---ceeecC-CceeEeCC---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLASIVG---SVIVGT-DMGYLFSP---QVESVKKALYGIWADGREVLEKKGLVARKRG  450 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~~-~~g~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~  450 (488)
                      | .++++||+++|+|+|+-...+-..   ..+.+. +.|..++.   +.++++++|.+++++ ++ .+++++++++..
T Consensus       352 G-~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~-~~-~~~~r~~a~~l~  426 (456)
T 2c1x_A          352 G-WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ-EK-GKKLRENLRALR  426 (456)
T ss_dssp             C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHS-HH-HHHHHHHHHHHH
T ss_pred             C-cchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCC-Cc-HHHHHHHHHHHH
Confidence            4 569999999999999987643110   245566 78888763   789999999999988 54 456666665554

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=98.62  E-value=6.6e-05  Score=74.24  Aligned_cols=131  Identities=16%  Similarity=-0.001  Sum_probs=79.4

Q ss_pred             CCcEEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEE-EeCCCc-----------hhHH-hhhCCc--------
Q 011355          291 NRSLVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLV-AGDGPW-----------GARY-RDLGTN--------  349 (488)
Q Consensus       291 ~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~g~~-----------~~~~-~~l~~~--------  349 (488)
                      +++.+.+..|+... ...+.+.+.+..+.+      .+.++++ +|.+..           ...+ ..+.++        
T Consensus       267 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~------~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~  339 (480)
T 2vch_A          267 LGSVLYVSFGSGGT-LTCEQLNELALGLAD------SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKR  339 (480)
T ss_dssp             TTCEEEEECTTTCC-CCHHHHHHHHHHHHH------TTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTT
T ss_pred             CCceEEEecccccC-CCHHHHHHHHHHHHh------cCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCC
Confidence            44577888888753 233444444444443      2344444 443210           0111 123333        


Q ss_pred             -EEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---cee-ecCCceeEeC-----C
Q 011355          350 -VIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVI-VGTDMGYLFS-----P  419 (488)
Q Consensus       350 -V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v-~~~~~g~l~~-----~  419 (488)
                       +.+.+++|+.   ++|+.+++.++-++  .| -++++||+++|+|+|+-...+-..   ..+ +.-+.|..++     .
T Consensus       340 g~~v~~w~Pq~---~vL~h~~v~~fvtH--gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~  413 (480)
T 2vch_A          340 GFVIPFWAPQA---QVLAHPSTGGFLTH--CG-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGL  413 (480)
T ss_dssp             EEEEESCCCHH---HHHHSTTEEEEEEC--CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSC
T ss_pred             eEEEeCccCHH---HHhCCCCcCeEEec--cc-chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCc
Confidence             4566799854   78999996433342  34 469999999999999987643110   233 4566777664     3


Q ss_pred             -CHHHHHHHHHHHHhc
Q 011355          420 -QVESVKKALYGIWAD  434 (488)
Q Consensus       420 -d~~~la~~i~~ll~~  434 (488)
                       +.++++++|.+++.+
T Consensus       414 ~~~~~l~~av~~vl~~  429 (480)
T 2vch_A          414 VRREEVARVVKGLMEG  429 (480)
T ss_dssp             CCHHHHHHHHHHHHTS
T ss_pred             cCHHHHHHHHHHHhcC
Confidence             789999999999984

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=98.58  E-value=3.6e-07  Score=83.04  Aligned_cols=240  Identities=10%  Similarity=0.059  Sum_probs=126.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQ  156 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (488)
                      |||+|-+...+.  ...|.-.++..|+++|+    +|.+++....+......+.+...+..        .+... +....
T Consensus         1 mki~ir~Da~~~--IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~g~~v~~l~~--------~d~~~-~~~~l   65 (282)
T 3hbm_A            1 MKVLFRSDSSSQ--IGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEIPYPVYELSS--------ESIYE-LINLI   65 (282)
T ss_dssp             CCEEEEECCBTT--TBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGCCSCEEECSS--------SCHHH-HHHHH
T ss_pred             CEEEEEEecCCC--ccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHCCCeEEEcCc--------cCHHH-HHHHH
Confidence            899999986543  44566677888888887    78888865433221112111111110        11111 12222


Q ss_pred             HHhcCCCCCcEEEeCCcchHH----hhhcc-CCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhh
Q 011355          157 TQNSTGKPFDVIHTESVGLRH----TRARN-LTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKF  231 (488)
Q Consensus       157 ~~~~~~~~~Dvv~~~~~~~~~----~~~~~-~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ...    ++|++++.++.+..    .++.. .. .+..+-+..                                   + 
T Consensus        66 ~~~----~~d~lIvD~Y~~~~~~~~~lk~~~~~-~i~~iDD~~-----------------------------------~-  104 (282)
T 3hbm_A           66 KEE----KFELLIIDHYGISVDDEKLIKLETGV-KILSFDDEI-----------------------------------K-  104 (282)
T ss_dssp             HHH----TCSEEEEECTTCCHHHHHHHHHHHCC-EEEEECSSC-----------------------------------C-
T ss_pred             HhC----CCCEEEEECCCCCHHHHHHHHHhcCc-EEEEEecCC-----------------------------------C-
Confidence            222    89999987654221    11111 12 344444420                                   0 


Q ss_pred             cCCccEEEEcChhhHHHHHHHhc--CCCCcEEEecCCccCCCcCCCcccchhhhhhh-CCCCCCcEEEEEEeeeccccCh
Q 011355          232 FPKYAHHVATSDHCGDVLKRIYM--IPEERVHVILNGVDEEVFKPDVAMGKDFKKKF-GIPENRSLVLGMAGRLVKDKGH  308 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~~g--~~~~~i~vi~ngvd~~~~~~~~~~~~~~r~~~-~i~~~~~~~i~~~Grl~~~Kg~  308 (488)
                      -..+|.++-.+-....   ..|.  ++.......  |.+.....      .++.+.- ...++.+.+++++|..++..-.
T Consensus       105 ~~~~Dllin~~~~~~~---~~Y~~~~p~~~~~l~--G~~Y~~lR------~eF~~~~~~~r~~~~~ILv~~GG~d~~~l~  173 (282)
T 3hbm_A          105 PHHCDILLNVNAYAKA---SDYEGLVPFKCEVRC--GFSYALIR------EEFYQEAKENRKKKYDFFICMGGTDIKNLS  173 (282)
T ss_dssp             CCCCSEEEECSTTCCG---GGGTTTCC-CCEEEE--SGGGCCCC------HHHHHHTTCCCCCCEEEEEECCSCCTTCHH
T ss_pred             cccCCEEEeCCcccch---hhccccCCCCCeEee--CCcccccC------HHHHHhhhhccccCCeEEEEECCCchhhHH
Confidence            1247888887654321   1131  232222333  33221111      1121110 0112233566778876544323


Q ss_pred             HHHHHHHHHhHhhccCCCCCeEEEEEeCCC-chhHHhhh---CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChH
Q 011355          309 PLMFEALKQLLAENDTFRRSTVFLVAGDGP-WGARYRDL---GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHT  384 (488)
Q Consensus       309 ~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~-~~~~~~~l---~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~  384 (488)
                      ..+++   .+.+ .    .+ ..++.|.+. ..+.+++.   ..++.+.++++  ++.++|++||++|.+    .  |.+
T Consensus       174 ~~vl~---~L~~-~----~~-i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~--~m~~~m~~aDlvI~~----g--G~T  236 (282)
T 3hbm_A          174 LQIAS---ELPK-T----KI-ISIATSSSNPNLKKLQKFAKLHNNIRLFIDHE--NIAKLMNESNKLIIS----A--SSL  236 (282)
T ss_dssp             HHHHH---HSCT-T----SC-EEEEECTTCTTHHHHHHHHHTCSSEEEEESCS--CHHHHHHTEEEEEEE----S--SHH
T ss_pred             HHHHH---Hhhc-C----CC-EEEEECCCchHHHHHHHHHhhCCCEEEEeCHH--HHHHHHHHCCEEEEC----C--cHH
Confidence            33333   3332 2    33 446677664 33444332   25899999966  999999999999982    2  479


Q ss_pred             HHHHHHcCCcEEEeCC
Q 011355          385 VLEAMLSGKPLMATRL  400 (488)
Q Consensus       385 ~lEAma~G~PVI~~~~  400 (488)
                      +.|++++|+|.|....
T Consensus       237 ~~E~~~~g~P~i~ip~  252 (282)
T 3hbm_A          237 VNEALLLKANFKAICY  252 (282)
T ss_dssp             HHHHHHTTCCEEEECC
T ss_pred             HHHHHHcCCCEEEEeC
Confidence            9999999999998764

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=98.54  E-value=4.2e-06  Score=87.60  Aligned_cols=186  Identities=11%  Similarity=0.145  Sum_probs=117.2

Q ss_pred             hcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcC--CCcccchhhhhhhCCCCCCcEEEEEEeeecccc--
Q 011355          231 FFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFK--PDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDK--  306 (488)
Q Consensus       231 ~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~--~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~K--  306 (488)
                      ...+.|.+++.|+...+.+.+.+++++.++.+++.+=....+.  ........+++++++++++ .+|+|+-++....  
T Consensus       475 ~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~k-k~ILyaPT~r~~~~~  553 (729)
T 3l7i_A          475 ETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDK-KVIMYAPTWRDDEFV  553 (729)
T ss_dssp             HHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSC-EEEEECCCCCGGGCC
T ss_pred             hhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCC-eEEEEeeeeeCCccc
Confidence            3578899999999999999998998777777665432111221  1223346788999998887 7788998875531  


Q ss_pred             --C-----hHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhH---HhhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCC
Q 011355          307 --G-----HPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGAR---YRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTL  376 (488)
Q Consensus       307 --g-----~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~---~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~  376 (488)
                        |     ...-++.+.+...      ++..+++-. +|....   .....+.+.-...  ..++.++|..||++|.   
T Consensus       554 ~~~~~~~~~~~~~~~l~~~l~------~~~~li~r~-Hp~~~~~~~~~~~~~~~~~~~~--~~di~~ll~~aD~lIT---  621 (729)
T 3l7i_A          554 SKGKYLFELKIDLDNLYKELG------DDYVILLRM-HYLISNALDLSGYENFAIDVSN--YNDVSELFLISDCLIT---  621 (729)
T ss_dssp             GGGSSCCCCTTCHHHHHHHHT------TTEEEEECC-CHHHHTTCCCTTCTTTEEECTT--CSCHHHHHHTCSEEEE---
T ss_pred             cccccccchhhHHHHHHHHcC------CCeEEEEec-CcchhccccccccCCcEEeCCC--CcCHHHHHHHhCEEEe---
Confidence              1     1122333433322      466666544 332111   1123344554444  3488999999999995   


Q ss_pred             CCCCCChHHHHHHHcCCcEEEeCCC---------CcccceeecCCceeEeCCCHHHHHHHHHHHHhc
Q 011355          377 RAQGLDHTVLEAMLSGKPLMATRLA---------SIVGSVIVGTDMGYLFSPQVESVKKALYGIWAD  434 (488)
Q Consensus       377 ~~eg~~~~~lEAma~G~PVI~~~~~---------~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~  434 (488)
                      .   ++.+++|++..++|||.....         |.--+ ..+.-.|-++. |.++|.++|......
T Consensus       622 D---ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~~-~~~eL~~~i~~~~~~  683 (729)
T 3l7i_A          622 D---YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIYT-EPYGLAKELKNLDKV  683 (729)
T ss_dssp             S---SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEES-SHHHHHHHHTTHHHH
T ss_pred             e---chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeEC-CHHHHHHHHhhhhcc
Confidence            1   456999999999999987321         11101 11223455555 899999999887764

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=98.16  E-value=0.00014  Score=68.59  Aligned_cols=107  Identities=13%  Similarity=0.106  Sum_probs=74.6

Q ss_pred             hhhhhCCCCCCcEEEEEEeeeccccCh--HHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh----C-CcEEEeC
Q 011355          282 FKKKFGIPENRSLVLGMAGRLVKDKGH--PLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL----G-TNVIVLG  354 (488)
Q Consensus       282 ~r~~~~i~~~~~~~i~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l----~-~~V~~~g  354 (488)
                      +.++.|++.+++++.+..|.-.+.|..  +.+.+.+..+.++      +.++++.|...+.+..+++    . ..+.+.|
T Consensus       175 ~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~------g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g  248 (349)
T 3tov_A          175 FYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL------GYKTVFFGGPMDLEMVQPVVEQMETKPIVATG  248 (349)
T ss_dssp             HHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH------TCEEEECCCTTTHHHHHHHHHTCSSCCEECTT
T ss_pred             HHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC------CCeEEEEeCcchHHHHHHHHHhcccccEEeeC
Confidence            445567776666777777865566665  4677777777664      3566778876655544442    2 3466778


Q ss_pred             ccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCC
Q 011355          355 PLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRL  400 (488)
Q Consensus       355 ~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~  400 (488)
                      ..+-.|+..+++.||++|..-    + |..-+ |.++|+|+|+--.
T Consensus       249 ~~sl~e~~ali~~a~~~i~~D----s-G~~Hl-Aaa~g~P~v~lfg  288 (349)
T 3tov_A          249 KFQLGPLAAAMNRCNLLITND----S-GPMHV-GISQGVPIVALYG  288 (349)
T ss_dssp             CCCHHHHHHHHHTCSEEEEES----S-HHHHH-HHTTTCCEEEECS
T ss_pred             CCCHHHHHHHHHhCCEEEECC----C-CHHHH-HHhcCCCEEEEEC
Confidence            888899999999999999742    2 33444 9999999998643

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=97.83  E-value=3.2e-05  Score=67.26  Aligned_cols=75  Identities=13%  Similarity=0.117  Sum_probs=53.4

Q ss_pred             cEEEeCccCHHHHHHHHH-hcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc-------ceeecCCceeEeCCC
Q 011355          349 NVIVLGPLDQTRLAMFYN-AIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG-------SVIVGTDMGYLFSPQ  420 (488)
Q Consensus       349 ~V~~~g~v~~~~l~~~~~-~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~-------e~v~~~~~g~l~~~d  420 (488)
                      ++...++++  ++.++|. .||++|.   + .| ..++.|++++|+|.|.-..+...+       +.+.+.+.++.+  +
T Consensus       115 ~v~v~~f~~--~m~~~l~~~AdlvIs---h-aG-agTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~--~  185 (224)
T 2jzc_A          115 KVIGFDFST--KMQSIIRDYSDLVIS---H-AG-TGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC--A  185 (224)
T ss_dssp             EEEECCSSS--SHHHHHHHHCSCEEE---S-SC-HHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE--C
T ss_pred             eEEEeeccc--hHHHHHHhcCCEEEE---C-Cc-HHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc--C
Confidence            566778865  9999999 9999997   3 34 569999999999999987653211       123333445554  5


Q ss_pred             HHHHHHHHHHHH
Q 011355          421 VESVKKALYGIW  432 (488)
Q Consensus       421 ~~~la~~i~~ll  432 (488)
                      +++|+++|.++.
T Consensus       186 ~~~L~~~i~~l~  197 (224)
T 2jzc_A          186 PTETGLIAGLRA  197 (224)
T ss_dssp             SCTTTHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            667777777763

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=97.68  E-value=0.0044  Score=57.78  Aligned_cols=130  Identities=15%  Similarity=0.073  Sum_probs=79.6

Q ss_pred             CcEEEEEEeeeccccChH--HHHHHHHHhHhhccCCCCCeEEEEE-eCCCchhHHhhh---CCcEEEeCccCHHHHHHHH
Q 011355          292 RSLVLGMAGRLVKDKGHP--LMFEALKQLLAENDTFRRSTVFLVA-GDGPWGARYRDL---GTNVIVLGPLDQTRLAMFY  365 (488)
Q Consensus       292 ~~~~i~~~Grl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~iv-G~g~~~~~~~~l---~~~V~~~g~v~~~~l~~~~  365 (488)
                      ++++.+..|.-.+.|...  .+.+.+..+.+      .++++++. |...+.+..+++   .+++.+.|..+-.|+..++
T Consensus       178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~------~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali  251 (326)
T 2gt1_A          178 GEYAVFLHATTRDDKHWPEEHWRELIGLLAD------SGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVL  251 (326)
T ss_dssp             TSEEEEECCCSSGGGSCCHHHHHHHHHHTTT------TCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHH
T ss_pred             CCEEEEEeCCCCccccCCHHHHHHHHHHHHH------CCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHH
Confidence            346777777666667654  66676666654      35677776 532233333332   2467788988899999999


Q ss_pred             HhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc--------ceeecCCceeEeCC-CHHHHHHHHHHHHhc
Q 011355          366 NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG--------SVIVGTDMGYLFSP-QVESVKKALYGIWAD  434 (488)
Q Consensus       366 ~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~--------e~v~~~~~g~l~~~-d~~~la~~i~~ll~~  434 (488)
                      +.||++|..-    + |..=+ |.+.|+|+|+--.+..+.        ..+..+... .... ++++..+++.+++++
T Consensus       252 ~~a~l~I~~D----S-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~-cm~~I~~~~V~~~i~~~l~~  322 (326)
T 2gt1_A          252 AGAKFVVSVD----T-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGN-ELSQLTANAVKQFIEENAEK  322 (326)
T ss_dssp             HTCSEEEEES----S-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGG-CGGGCCHHHHHHHHHHTTTT
T ss_pred             HhCCEEEecC----C-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcc-cccCCCHHHHHHHHHHHHHH
Confidence            9999999742    2 33444 777999999852111110        111111111 1233 788888888887765

>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*

Probab=93.75  E-value=2.6  Score=35.08  Aligned_cols=333  Identities=16%  Similarity=0.151  Sum_probs=184.1

Q ss_pred             ceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-CCCc--eEEEecCCCCccCcchhHHHH
Q 011355           76 LLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-YPIS--SLYFHLSKPTAAGYLDQSIVW  152 (488)
Q Consensus        76 ~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~--~i~~~~~~~~~~~~~~~~~~~  152 (488)
                      .|+|+++...   +....|+..+.++.-..+.+.||+|+++...+..-.... ....  .+.+...+       .+..++
T Consensus         1 smricifmar---glegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilak-------eydkal   70 (401)
T 1xv5_A            1 SMRICIFMAR---GLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTSSHDHKSFSIPVILAK-------EYDKAL   70 (401)
T ss_dssp             CCEEEEEETT---CCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTTTSSSCTTTCEEECTTT-------CHHHHH
T ss_pred             CceEEEEeec---cccccCceeeehhhhhhhhcCCcEEEEEEeccccccccccccCccccceeEehh-------hhHHHh
Confidence            3899888753   457789999999999999999999999988764433222 1111  12222221       222222


Q ss_pred             HHHHHHhcCCCCCcEEEeCCcc--------hHHhh---hccCCc--EEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHH
Q 011355          153 QQLQTQNSTGKPFDVIHTESVG--------LRHTR---ARNLTN--VVVSWHGIAYETIHSDIIQELLRTPEEPQAYALA  219 (488)
Q Consensus       153 ~~~~~~~~~~~~~Dvv~~~~~~--------~~~~~---~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (488)
                          ++..   +.|++++++..        +..+.   ....|.  +++.-|+-.......+.              .+.
T Consensus        71 ----klvn---dcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrnl--------------gle  129 (401)
T 1xv5_A           71 ----KLVN---DCDILIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSLRRNL--------------GLE  129 (401)
T ss_dssp             ----HHHT---SCSEEEEEECCBTTSCHHHHHHHHHHHHHSCTTSEEEEEECCCSHHHHTTBS--------------SHH
T ss_pred             ----hhhc---cCcEEEEccCccchhHHHHHhhHHHHHhcCCCceEEEEEeccchhhhhhhhc--------------ChH
Confidence                2221   78999987632        11111   111121  67777774332221111              000


Q ss_pred             HHHHHHHHHhhhcCCccEEEEcChh---hHHHHHHHhcCCCCcEEEecCCccCC----CcCCCcccchhhhhhhCCCCCC
Q 011355          220 ERASKVVEEVKFFPKYAHHVATSDH---CGDVLKRIYMIPEERVHVILNGVDEE----VFKPDVAMGKDFKKKFGIPENR  292 (488)
Q Consensus       220 ~~~~~~~~~~~~~~~~d~ii~~S~~---~~~~~~~~~g~~~~~i~vi~ngvd~~----~~~~~~~~~~~~r~~~~i~~~~  292 (488)
                                ...+++|.|+..|+.   .+-.+.+.|.   +.+.. ...+...    .|.+. -+....|..+--.-.+
T Consensus       130 ----------etvrradvifshsdngdfnkvlmkewyp---etvsl-fddieeaptvynfqpp-mdivkvrstywkdvse  194 (401)
T 1xv5_A          130 ----------ETVRRADVIFSHSDNGDFNKVLMKEWYP---ETVSL-FDDIEEAPTVYNFQPP-MDIVKVRSTYWKDVSE  194 (401)
T ss_dssp             ----------HHHHHCSEEEESCTTSHHHHTHHHHHSC---SSCCS-SSCCCCCCCEEECCCC-BCHHHHHHHHCCCGGG
T ss_pred             ----------HhhhhhceEEecCCCCcHHHHHHHhhcc---chhhh-hcchhhCCceeccCCC-ceeeeeehhhhccHHH
Confidence                      234678999998864   2233444442   21111 1111110    11121 1123344333211111


Q ss_pred             -cE-EEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCC--CchhHHhh-----------------hC--Cc
Q 011355          293 -SL-VLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDG--PWGARYRD-----------------LG--TN  349 (488)
Q Consensus       293 -~~-~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g--~~~~~~~~-----------------l~--~~  349 (488)
                       .. +=-++||-...||.-.+.+...++.+..     .-.-++-|-.  |..-.+++                 ++  ..
T Consensus       195 inmninrwigrtttwkgfyqmfdfhekflkpa-----gkstvmeglerspafiaikekgipyeyygnreidkmnlapnqp  269 (401)
T 1xv5_A          195 INMNINRWIGRTTTWKGFYQMFDFHEKFLKPA-----GKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLAPNQP  269 (401)
T ss_dssp             CEEEEEEEECCSCGGGCHHHHHHHHHHTTTTT-----TCEEEEECCCCSHHHHHHHHTTCCEEEECGGGGGGCCCSSSCC
T ss_pred             hhcchhhhhcccchhHhHHHHhhHHHHhcCcc-----chhhhhhhhhcCCceEEEcccCCchhhcCcchhhhhcCCCCCc
Confidence             01 2237899899999999999888877632     2233444521  11111111                 22  22


Q ss_pred             EEEeCccCHHHHHHHHHhcCEEEeCCCC-----CCCCChHHHHHHHcCCcEEEe---------CCCCcccceeecCCcee
Q 011355          350 VIVLGPLDQTRLAMFYNAIDIFVNPTLR-----AQGLDHTVLEAMLSGKPLMAT---------RLASIVGSVIVGTDMGY  415 (488)
Q Consensus       350 V~~~g~v~~~~l~~~~~~adv~v~ps~~-----~eg~~~~~lEAma~G~PVI~~---------~~~~~~~e~v~~~~~g~  415 (488)
                      ..++.-.-..++.+-+..+.+.-..|.-     ..+.-.+-+|--|||+-.|.-         ++...+  +..++..-+
T Consensus       270 aqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntp--ltshdsgii  347 (401)
T 1xv5_A          270 AQILDCYINSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTP--LTSHDSGII  347 (401)
T ss_dssp             EEEESCCCHHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCB--GGGSCCSCE
T ss_pred             chhhhheecHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCc--ccccCCceE
Confidence            4555544467888889998887665531     235678899999999754432         222221  123334445


Q ss_pred             EeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHH
Q 011355          416 LFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAA  462 (488)
Q Consensus       416 l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~  462 (488)
                      +++. |.++--+.|.++..+ ...+.+-.++|+++.-++-+..-..+.
T Consensus       348 wfdendmestferikelssd-ralydrerekayeflyqhqdssfcfke  394 (401)
T 1xv5_A          348 WFDENDMESTFERIKELSSD-RALYDREREKAYEFLYQHQDSSFCFKE  394 (401)
T ss_dssp             EECTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHBHHHHHHH
T ss_pred             EecCCchHHHHHHHHHhccc-hhhhhHHHHHHHHHHHhcccccchhHh
Confidence            6777 899999999999998 899999899999988665454444433

>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0

Probab=86.65  E-value=3.3  Score=36.25  Aligned_cols=42  Identities=17%  Similarity=0.129  Sum_probs=29.6

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCS  124 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~  124 (488)
                      ++|||++..+.       |=...-+..|+++|.+ +++|+|+++..+...
T Consensus        10 ~~m~ILlTNDD-------Gi~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg   51 (261)
T 3ty2_A           10 PKLRLLLSNDD-------GVYAKGLAILAKTLAD-LGEVDVVAPDRNRSG   51 (261)
T ss_dssp             -CCEEEEECSS-------CTTCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred             CCCeEEEEcCC-------CCCCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence            56999888762       1123346688999987 799999999765443

>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1

Probab=85.71  E-value=6.1  Score=31.01  Aligned_cols=80  Identities=21%  Similarity=0.221  Sum_probs=48.9

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeE-EEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHH
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHEL-HIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQ  153 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  153 (488)
                      ..||++|+...-|.   ..-..+..+.++.++.+.||+| .|+-..+.-.......         .|.. ...++...|.
T Consensus        11 ~~~~~~ivv~~~Py---g~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a~~~q---------~p~~-~~~~l~~~~~   77 (140)
T 2d1p_A           11 GSMRFAIVVTGPAY---GTQQASSAFQFAQALIADGHELSSVFFYREGVYNANQLT---------SPAS-DEFDLVRAWQ   77 (140)
T ss_dssp             CCCEEEEEECSCSS---SSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGBTTC---------CCCT-TSCCHHHHHH
T ss_pred             CceEEEEEEcCCCC---CcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHHhcCC---------CCcc-ccCChHHHHH
Confidence            56999999865443   2344566789999999999999 8888775322211100         0111 1134555677


Q ss_pred             HHHHHhcCCCCCcEEEeC
Q 011355          154 QLQTQNSTGKPFDVIHTE  171 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~  171 (488)
                      .+....    +.++..|.
T Consensus        78 ~La~~~----gv~l~vC~   91 (140)
T 2d1p_A           78 QLNAQH----GVALNICV   91 (140)
T ss_dssp             HHHHHH----CCEEEEEH
T ss_pred             HHHHHc----CCEEEEeH
Confidence            664444    67776664

>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}

Probab=85.34  E-value=6.8  Score=34.11  Aligned_cols=43  Identities=21%  Similarity=0.123  Sum_probs=28.0

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNC  123 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~  123 (488)
                      .+++|++|+.+      ..-.+..+-..+..+.++|++|.+++.+.+..
T Consensus         2 ~~~~vL~v~aH------PDDe~l~~Ggtia~~~~~G~~V~vv~lT~G~~   44 (242)
T 2ixd_A            2 SGLHILAFGAH------ADDVEIGMAGTIAKYTKQGYEVGICDLTEADL   44 (242)
T ss_dssp             CCCSEEEEESS------TTHHHHHHHHHHHHHHHTTCCEEEEEEECCTT
T ss_pred             CCccEEEEEeC------CChHHHhHHHHHHHHHHCCCeEEEEEEcCCCC
Confidence            45789999863      23333333345556677899999998876543

>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}

Probab=83.48  E-value=1.8  Score=38.67  Aligned_cols=44  Identities=18%  Similarity=0.229  Sum_probs=29.6

Q ss_pred             CCCceEEEEEecCCCCCCCCCcHH-HHHHHHHHHHHHCCCeEEEEecCC
Q 011355           73 PLKLLKIALFVKKWPHRSHAGGLE-RHALTLHLALAKRGHELHIFTASC  120 (488)
Q Consensus        73 ~~~~mkIl~i~~~~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~  120 (488)
                      .+++|||++|..+ |   ...+.. ..+...++.|.+.||+|.++-...
T Consensus        19 ~m~~MKiLII~aH-P---~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~   63 (280)
T 4gi5_A           19 YFQSMKVLLIYAH-P---EPRSLNGALKNFAIRHLQQAGHEVQVSDLYA   63 (280)
T ss_dssp             ---CCEEEEEECC-S---CTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred             hhhCCeEEEEEeC-C---CCccHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence            4588999999864 3   334433 344567788999999999987643

>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A

Probab=80.36  E-value=3.8  Score=31.72  Aligned_cols=42  Identities=24%  Similarity=0.288  Sum_probs=31.7

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeE-EEEecCCC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHEL-HIFTASCL  121 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~~  121 (488)
                      ||++++...-|.   ..-..+..+.++.++.+.||+| .|+...+.
T Consensus         1 mk~~iiv~~~p~---~~~~~~~al~~a~a~~~~g~~v~~vff~~dG   43 (130)
T 2hy5_A            1 MKFALQINEGPY---QHQASDSAYQFAKAALEKGHEIFRVFFYHDG   43 (130)
T ss_dssp             CEEEEEECSCTT---TSTHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred             CEEEEEEeCCCC---CcHHHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence            788888865433   2334567789999999999999 88887753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	488
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	3e-16
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	5e-15
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	2e-07
d2bfwa1	196	c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py	1e-04
d2iw1a1	370	c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt	2e-04

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 78.7 bits (192), Expect = 3e-16
 Identities = 66/434 (15%), Positives = 118/434 (27%), Gaps = 54/434 (12%)

Query: 78  KIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFT-------------------- 117
           K+ L   ++      GGL      +  ALA  GHE+ +FT                    
Sbjct: 2   KVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEE 60

Query: 118 -----ASCLNCSFPTYPISSLYFHLSKPTAAGYLDQS--------IVWQQLQTQNSTGKP 164
                +     +   Y I             G+                 L         
Sbjct: 61  VQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPL 120

Query: 165 FDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASK 224
            DV+H          A         +   A  TIH     +L          +       
Sbjct: 121 PDVVHFHDWHTVFAGALIKKY----FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPD 176

Query: 225 VVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVAMG----- 279
           +  E             S          +   E ++  + NG+D   +      G     
Sbjct: 177 IDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDER 236

Query: 280 -KDFKKKFGIPENRSLVLGMAGRLVKDKGHPL----MFEALKQLLAENDTFRRSTVFLVA 334
            K    KFG+ E     + +       KG  +    +     +   +   F         
Sbjct: 237 KKSLLSKFGMDEGV-TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE 295

Query: 335 GDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP 394
            +G   +     G   ++   L +  +   Y ++D  + P+   +      LEAM  G  
Sbjct: 296 LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPS-YFEPFGLVALEAMCLGAI 354

Query: 395 LMATRLASIVGSVIVGTDMGYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARKRGLNL 453
            +A+ +  +    I+  + G L        +  A+       R  L K     +KR ++ 
Sbjct: 355 PIASAVGGL--RDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS- 411

Query: 454 FTATKMAAAYERLF 467
           F+  K A  Y + +
Sbjct: 412 FSWEKSAERYVKAY 425

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 75.1 bits (183), Expect = 5e-15
 Identities = 71/460 (15%), Positives = 126/460 (27%), Gaps = 89/460 (19%)

Query: 93  GGLERHALTLHLALAKRGHELHIFT-----------------------------ASCLNC 123
           GGL      L +AL   G                                        + 
Sbjct: 17  GGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHE 76

Query: 124 SFPTYPISSLYFHLSK------PTAAGYLDQSIVWQQLQTQNST-------GKPFDVIHT 170
                 + +  ++          T   Y D    +  L    +        G   D++H 
Sbjct: 77  RLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHA 136

Query: 171 ES------VGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASK 224
                                 +++ H IA++      I   L  P         E  + 
Sbjct: 137 HDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYND 196

Query: 225 VVEEVKFFPKYAHHVATSD---------HCGDVLKRIYMIPEERVHVILNGVDEEVFKPD 275
           V                S            G  L+ +       +H I+NG+D +V+ P 
Sbjct: 197 VSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPA 256

Query: 276 VAM-----------------GKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQL 318
                                K   + F I ++ S +  +  RL   KG  LM EA+ ++
Sbjct: 257 TDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEI 316

Query: 319 LAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA 378
           ++            VA +G   A        V V    ++    +     D  + P+ R 
Sbjct: 317 VSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPS-RF 375

Query: 379 QGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDM--------GYLFSPQ-VESVKKALY 429
           +    T L A+  G   +  R   +  +VI             G  FSP  ++ +K+A+ 
Sbjct: 376 EPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIR 435

Query: 430 GIWADG--REVLEKKGLVARKRGLNLFTATKMAAAYERLF 467
                    ++  +   +  K      +  K A  Y  L+
Sbjct: 436 RTVRYYHDPKLWTQMQKLGMKS---DVSWEKSAGLYAALY 472

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 29/217 (13%), Positives = 53/217 (24%), Gaps = 28/217 (12%)

Query: 259 RVHVILNGVDEEVFKPDVA--MGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK 316
           R  V   G++ +      A  +     +     +N   +  +  RL   KG P  F A +
Sbjct: 219 RTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSV-ERLDYSKGLPERFLAYE 277

Query: 317 QLLAENDTFRRSTVFLVAGDGPWG----------------------ARYRDLGTNVIVLG 354
            LL +         +        G                                 +  
Sbjct: 278 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ 337

Query: 355 PLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRL-ASIVGSVIVGTDM 413
             D+  L   +   D+ +   LR  G++    E + +  P     L  S           
Sbjct: 338 HFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS 396

Query: 414 GYLFSPQ-VESVKKALYGIWADGREVLEKKGLVARKR 449
             + +P   + V  AL             +       
Sbjct: 397 ALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDV 433

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 33/197 (16%), Positives = 62/197 (31%), Gaps = 13/197 (6%)

Query: 266 GVDEEVFKPDVAMG------KDFKKKFGIPENRSLVLGMAGRLVKD-KGHPLMFEALKQL 318
           G+D   +      G      K    KFG+ E         GR  +  KG  ++ +A++ L
Sbjct: 1   GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGV--TFMFIGRFDRGQKGVDVLLKAIEIL 58

Query: 319 LAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRA 378
            ++ + F+     ++    P    +            +    L+  +          +  
Sbjct: 59  SSKKE-FQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVII 117

Query: 379 QGLDHTVLEAMLSGKPLMATRLASIVGSV--IVGTDMGYLFSPQ-VESVKKALYGIWADG 435
                      L    L A  +AS VG +  I+  + G L        +  A+       
Sbjct: 118 PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELS 177

Query: 436 REVLEKKGLVARKRGLN 452
           R  L K     +KR ++
Sbjct: 178 RSDLSKFRENCKKRAMS 194

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

 Score = 41.1 bits (94), Expect = 2e-04
 Identities = 50/392 (12%), Positives = 106/392 (27%), Gaps = 31/392 (7%)

Query: 79  IALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLS 138
           +A  + K+      GGL+R  + +   +A RGH + ++T S        + +  +     
Sbjct: 2   VAFCLYKYFPF---GGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSH 58

Query: 139 KPTAAGYLDQSIVWQQLQTQNSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETI 198
                     + V   L+   +                          V    G      
Sbjct: 59  TNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAE-KVAQEKGF----- 112

Query: 199 HSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEE 258
                  L R     + YA  ERA           K    +  +D      ++ Y    E
Sbjct: 113 -------LYRLTSRYRHYAAFERA------TFEQGKSTKLMMLTDKQIADFQKHYQTEPE 159

Query: 259 RVHVILNGVDEEV--FKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK 316
           R  ++  G+  +    +      + +++K GI E ++L+L +       +          
Sbjct: 160 RFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSD--FGRKGVDRSIEAL 217

Query: 317 QLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTL 376
             L E+         +            +       +             A    +    
Sbjct: 218 ASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPA 277

Query: 377 RAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP--QVESVKKALYGIWAD 434
             +     +LEA+ +G P++ T +       I   + G + +     E + + L      
Sbjct: 278 YQEAAGIVLLEAITAGLPVLTTAVCGY-AHYIADANCGTVIAEPFSQEQLNEVLRKALTQ 336

Query: 435 GREVLEKKGLVARKRGLNLFTATKMAAAYERL 466
              +       AR    +      +      +
Sbjct: 337 -SPLRMAWAENARHY-ADTQDLYSLPEKAADI 366

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	488
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.95
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.94
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.93
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.37
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.32
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	99.31
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.23
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	99.22
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	99.21
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	99.12
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	98.64
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	98.62
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	98.5
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	98.34
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	98.21
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	97.5
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	97.46
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	96.42
d1uana_	227	Hypothetical protein TT1542 {Thermus thermophilus	92.57
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.5
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.15
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	90.08
d2hy5a1	130	Sulfurtransferase DsrE {Chromatium vinosum [TaxId:	89.59
d2d1pa1	128	tRNA 2-thiouridine synthesizing protein D, TusD {E	87.95
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	85.39
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	85.26
d1ydga_	201	Trp repressor binding protein WrbA {Deinococcus ra	84.57
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	83.92

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2e-43  Score=352.02  Aligned_cols=382  Identities=17%  Similarity=0.183  Sum_probs=256.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC--------------CCCCCCC-------ceEEE
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNC--------------SFPTYPI-------SSLYF  135 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------~~~~~~~-------~~i~~  135 (488)
                      |||++|+..|+|....||.+.++..|+++|+++||+|+|+++..+..              .......       .++.+
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   80 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL   80 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence            89999998877644579989999999999999999999998642110              0000000       11111


Q ss_pred             ec-------CCCC-------ccCcch----hHHHHHHHHHH---hcCCCCCcEEEeCCcc---hHH----hhhccCCcEE
Q 011355          136 HL-------SKPT-------AAGYLD----QSIVWQQLQTQ---NSTGKPFDVIHTESVG---LRH----TRARNLTNVV  187 (488)
Q Consensus       136 ~~-------~~~~-------~~~~~~----~~~~~~~~~~~---~~~~~~~Dvv~~~~~~---~~~----~~~~~~p~~v  187 (488)
                      ..       .+..       ......    +..........   .....+|||||+|+..   ...    .....+| ++
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip-~V  159 (477)
T d1rzua_          81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIP-SL  159 (477)
T ss_dssp             EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCC-EE
T ss_pred             EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCC-EE
Confidence            00       0000       000000    11111111111   1222389999998631   111    1223467 99


Q ss_pred             EeeeCCcchhhhh-hhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHH---------hcCCC
Q 011355          188 VSWHGIAYETIHS-DIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRI---------YMIPE  257 (488)
Q Consensus       188 ~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---------~g~~~  257 (488)
                      .++|+..+..... +..... ..+.......-.............+..+|.++++|...++.....         .....
T Consensus       160 ~t~H~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~  238 (477)
T d1rzua_         160 LTIHNIAFQGQFGANIFSKL-ALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRA  238 (477)
T ss_dssp             EEESCTTCCCEECGGGGGGS-CCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTG
T ss_pred             EEEecccccccCCHHHHHHh-hcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhcc
Confidence            9999875432211 111111 000000000000000000000022356899999998776654321         12235


Q ss_pred             CcEEEecCCccCCCcCCCcc-----------------cchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHHHhHh
Q 011355          258 ERVHVILNGVDEEVFKPDVA-----------------MGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALKQLLA  320 (488)
Q Consensus       258 ~~i~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~~l~~  320 (488)
                      .++.+|+||+|.+.|.+...                 ....++...++++++.++|+++||+.++||++.|++|+.++.+
T Consensus       239 ~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~  318 (477)
T d1rzua_         239 HVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS  318 (477)
T ss_dssp             GGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH
T ss_pred             ccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHh
Confidence            68999999999887755321                 1245667788877766889999999999999999999999876


Q ss_pred             hccCCCCCeEEEEEeCCCchhHH------hhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCc
Q 011355          321 ENDTFRRSTVFLVAGDGPWGARY------RDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP  394 (488)
Q Consensus       321 ~~~~~~~~~~l~ivG~g~~~~~~------~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~P  394 (488)
                            .+.+++++|.|+.....      ..+..+|.+.+..+.+++..+|++||++|+||.+ |+||++++|||+||+|
T Consensus       319 ------~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~-E~fglv~lEAma~G~P  391 (477)
T d1rzua_         319 ------LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRF-EPCGLTQLYALRYGCI  391 (477)
T ss_dssp             ------TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTCE
T ss_pred             ------hCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCCccc-cCCCHHHHHHHHcCCC
Confidence                  35688889988754322      1256899999999999999999999999999985 9999999999999999


Q ss_pred             EEEeCCCCcccceeecCC---------ceeEeCC-CHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHhhhCCHHHHHH
Q 011355          395 LMATRLASIVGSVIVGTD---------MGYLFSP-QVESVKKALYGIWA---DGREVLEKKGLVARKRGLNLFTATKMAA  461 (488)
Q Consensus       395 VI~~~~~~~~~e~v~~~~---------~g~l~~~-d~~~la~~i~~ll~---~~~~~~~~~~~~a~~~~~~~fs~~~~~~  461 (488)
                      ||+|+.||++ |++.++.         +|+++++ |+++|+++|.++++   | ++.+++|+++|.   +++|||+++++
T Consensus       392 vVas~~GG~~-E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~-~~~~~~~~~~a~---~~~fsw~~~a~  466 (477)
T d1rzua_         392 PVVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWTQMQKLGM---KSDVSWEKSAG  466 (477)
T ss_dssp             EEEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC-HHHHHHHHHHHH---TCCCBHHHHHH
T ss_pred             EEEcCCCCCc-ceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCC-HHHHHHHHHHHH---HhhCCHHHHHH
Confidence            9999999998 8887764         8999999 99999999998776   5 889999988874   46799999999


Q ss_pred             HHHHHHHHhhc
Q 011355          462 AYERLFLCISN  472 (488)
Q Consensus       462 ~~~~~~~~~~~  472 (488)
                      +|+++|+++++
T Consensus       467 ~~~~lY~~ll~  477 (477)
T d1rzua_         467 LYAALYSQLIS  477 (477)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHhC
Confidence            99999999874

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=5e-42  Score=338.45  Aligned_cols=380  Identities=18%  Similarity=0.185  Sum_probs=267.9

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-----C------------CCceEEEecCC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPT-----Y------------PISSLYFHLSK  139 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-----~------------~~~~i~~~~~~  139 (488)
                      |||++++..|||. ..||+++++..|+++|+++||+|+|+++.........     .            ....+.+....
T Consensus         1 MkIl~~~~~~pP~-~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (437)
T d2bisa1           1 MKVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG   79 (437)
T ss_dssp             CEEEEECSCCTTC-CSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEE
T ss_pred             CEEEEECCccCCc-ccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecC
Confidence            9999999999884 3699999999999999999999999997643322111     0            00011111000


Q ss_pred             C------CccC-cch-h--------HHHHHHHHHHhcCCCCCcEEEeCCcchH-----HhhhccCCcEEEeeeCCcchhh
Q 011355          140 P------TAAG-YLD-Q--------SIVWQQLQTQNSTGKPFDVIHTESVGLR-----HTRARNLTNVVVSWHGIAYETI  198 (488)
Q Consensus       140 ~------~~~~-~~~-~--------~~~~~~~~~~~~~~~~~Dvv~~~~~~~~-----~~~~~~~p~~v~~~h~~~~~~~  198 (488)
                      .      .... .+. .        ......+.........||+||+|+....     .....++| ++++.|+......
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~~  158 (437)
T d2bisa1          80 GGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-AVFTIHRLNKSKL  158 (437)
T ss_dssp             SSGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHHHCCC-EEEEESSCCCCCE
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhccccCc-eeEEEeecccccc
Confidence            0      0000 000 0        0111122223333336899999974321     11223567 9999999876543


Q ss_pred             hhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCCCcc-
Q 011355          199 HSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKPDVA-  277 (488)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~~~~-  277 (488)
                      ...................        ..+......+|.+++.++.........++....++.+++||+|.+.+.+... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~  230 (437)
T d2bisa1         159 PAFYFHEAGLSELAPYPDI--------DPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLT  230 (437)
T ss_dssp             EHHHHHHTTCGGGCCSSEE--------CHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCC
T ss_pred             chhhhhhccchhhhhHHHH--------HHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccc
Confidence            3322221110000000000        0001223458899999998887777767777889999999999988765322 


Q ss_pred             -----cchhhhhhhCCCCCCcEEEEEEeeec-cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhH--Hh----h
Q 011355          278 -----MGKDFKKKFGIPENRSLVLGMAGRLV-KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGAR--YR----D  345 (488)
Q Consensus       278 -----~~~~~r~~~~i~~~~~~~i~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~--~~----~  345 (488)
                           ....+++++++.++  ++++++|++. +.||++.+++|+..+..+...  ++++|+++|.|+....  ++    .
T Consensus       231 ~~~~~~~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~--~~~~lvi~G~~~~~~~~~~~~~~~~  306 (437)
T d2bisa1         231 GSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKGDPELEGWARSLEEK  306 (437)
T ss_dssp             SCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCBCHHHHHHHHHHHHT
T ss_pred             hhhHHHHHhhhhhhhccCC--ceEEEeecccccchhHHHHHhhhccccccccc--ccceeeeecccccccccchhhhccc
Confidence                 23456777776543  6788999996 479999999999988543211  7899999999864422  22    2


Q ss_pred             hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCC-CHHHH
Q 011355          346 LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSP-QVESV  424 (488)
Q Consensus       346 l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~-d~~~l  424 (488)
                      ...++.+.|.++.+++..+++.||++++||. .|++|++++|||+||+|||+++.||.. |++.+ ++|+++++ |++++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~-~e~~~~~~~Eama~G~Pvi~~~~g~~~-e~i~~-~~G~~~~~~d~~~l  383 (437)
T d2bisa1         307 HGNVKVITEMLSREFVRELYGSVDFVIIPSY-FEPFGLVALEAMCLGAIPIASAVGGLR-DIITN-ETGILVKAGDPGEL  383 (437)
T ss_dssp             CTTEEEECSCCCHHHHHHHHTTCSEEEECCS-CCSSCHHHHHHHTTTCEEEEESCTTHH-HHCCT-TTCEEECTTCHHHH
T ss_pred             cccceeccccCcHHHHHHHHhhhcccccccc-ccccchHHHHHHHCCCCEEEeCCCCcH-HhEEC-CcEEEECCCCHHHH
Confidence            3466788889999999999999999999997 599999999999999999999999988 77664 68999999 99999


Q ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhccc
Q 011355          425 KKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCISNDE  474 (488)
Q Consensus       425 a~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~  474 (488)
                      +++|.++++++++.+++|++++++.++ +|||++++++|+++|+++++.-
T Consensus       384 a~~i~~ll~~~~~~~~~~~~~~~~~~~-~~s~~~~a~~~~~iY~~~i~r~  432 (437)
T d2bisa1         384 ANAILKALELSRSDLSKFRENCKKRAM-SFSWEKSAERYVKAYTGSIDRA  432 (437)
T ss_dssp             HHHHHHHHTTTTSCTHHHHHHHHHHHH-HSCHHHHHHHHHHHHHTCSCCB
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHhH
Confidence            999999998548889999999999985 5999999999999999998743

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.7e-40  Score=315.74  Aligned_cols=357  Identities=16%  Similarity=0.165  Sum_probs=250.3

Q ss_pred             EEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHHHHH
Q 011355           79 IALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQLQTQ  158 (488)
Q Consensus        79 Il~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  158 (488)
                      |+|++..|+|   .||+++++.+++++|+++||+|+|+|........  .....+.+.....  ............+...
T Consensus         2 i~f~~~~y~p---~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   74 (370)
T d2iw1a1           2 VAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP--KAFELIQVPVKSH--TNHGRNAEYYAWVQNH   74 (370)
T ss_dssp             EEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC--TTCEEEECCCCCS--SHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCC---CCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCCC--CceEEEEcCcccc--ccchhhHHHHHHHHHH
Confidence            6888877755   4999999999999999999999999976433221  2222222221111  0111112222222233


Q ss_pred             hcCCCCCcEEEeCCcchHHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          159 NSTGKPFDVIHTESVGLRHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       159 ~~~~~~~Dvv~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .... ++|+||.+......        .+...++.................  ... ........+   .......++.+
T Consensus        75 ~~~~-~~d~v~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~---~~~~~~~~~~~  139 (370)
T d2iw1a1          75 LKEH-PADRVVGFNKMPGL--------DVYFAADVCYAEKVAQEKGFLYRL--TSR-YRHYAAFER---ATFEQGKSTKL  139 (370)
T ss_dssp             HHHS-CCSEEEESSCCTTC--------SEEECCSCCHHHHHHHHCCHHHHT--SHH-HHHHHHHHH---HHHSTTCCCEE
T ss_pred             HHhc-ccceeeecccCchH--------HHHHHhhcccceeeeeecCccccc--cch-hchhHHHHH---HHHhhccCceE
Confidence            3333 89999987532110        111111111100000000000000  000 011111111   11223567899


Q ss_pred             EEcChhhHHHHHHHhcCCCCcEEEecCCccCCCcCC--CcccchhhhhhhCCCCCCcEEEEEEeeeccccChHHHHHHHH
Q 011355          239 VATSDHCGDVLKRIYMIPEERVHVILNGVDEEVFKP--DVAMGKDFKKKFGIPENRSLVLGMAGRLVKDKGHPLMFEALK  316 (488)
Q Consensus       239 i~~S~~~~~~~~~~~g~~~~~i~vi~ngvd~~~~~~--~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~  316 (488)
                      ++.++...+.+.+.++.+..++.+++||+|.+.+.+  .+..+..+|+.+++++++ ++++++||+.+.||++.+++|++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~~gr~~~~Kg~~~li~a~~  218 (370)
T d2iw1a1         140 MMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-NLLLQVGSDFGRKGVDRSIEALA  218 (370)
T ss_dssp             EESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC-EEEEEECSCTTTTTHHHHHHHHH
T ss_pred             EEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccc-eEEEEEeccccccchhhhccccc
Confidence            999999999988888999999999999999876533  334456789999998887 88999999999999999999999


Q ss_pred             HhHhhccCCCCCeEEEEEeCCCchhHHhh------hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHH
Q 011355          317 QLLAENDTFRRSTVFLVAGDGPWGARYRD------LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAML  390 (488)
Q Consensus       317 ~l~~~~~~~~~~~~l~ivG~g~~~~~~~~------l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma  390 (488)
                      .+.++.    ++..+.++|.++..+.+++      ..++++|+|+.  +++.++|++||++|+||. .||||++++|||+
T Consensus       219 ~l~~~~----~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~v~ps~-~E~~~~~~~EAma  291 (370)
T d2iw1a1         219 SLPESL----RHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAY-QEAAGIVLLEAIT  291 (370)
T ss_dssp             TSCHHH----HHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCS-CCSSCHHHHHHHH
T ss_pred             cccccc----ccceeeeccccccccccccccccccccccccccccc--cccccccccccccccccc-cccccceeeeccc
Confidence            998887    7777777776555444443      24789999985  589999999999999997 5999999999999


Q ss_pred             cCCcEEEeCCCCcccceeecCCceeEe-CC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 011355          391 SGKPLMATRLASIVGSVIVGTDMGYLF-SP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFL  468 (488)
Q Consensus       391 ~G~PVI~~~~~~~~~e~v~~~~~g~l~-~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  468 (488)
                      ||+|||+++.+|.+ |++.++.+|+++ ++ |+++++++|.++++| ++.+++|+++|++++++ |++..+.+++.++|+
T Consensus       292 ~G~PvI~s~~~g~~-e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~-~~~~~~~~~~~~ii~  368 (370)
T d2iw1a1         292 AGLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDLYSLPEKAADIIT  368 (370)
T ss_dssp             HTCCEEEETTSTTT-HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH-SCCSCHHHHHHHHHH
T ss_pred             CCeeEEEeCCCChH-HHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHH-hChhHHHHHHHHHHh
Confidence            99999999999998 899999999766 56 999999999999999 99999999999999965 677777777777764

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.95  E-value=9.2e-28  Score=208.28  Aligned_cols=182  Identities=21%  Similarity=0.355  Sum_probs=150.5

Q ss_pred             CccCCCcCCCc------ccchhhhhhhCCCCCCcEEEEEEeeec-cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCC
Q 011355          266 GVDEEVFKPDV------AMGKDFKKKFGIPENRSLVLGMAGRLV-KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGP  338 (488)
Q Consensus       266 gvd~~~~~~~~------~~~~~~r~~~~i~~~~~~~i~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~  338 (488)
                      |||.+.|.+..      ..+..++++++++.+  .+|+|+||+. ++||++.+++|++.+.++...  ++++|+++|+|+
T Consensus         1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g~   76 (196)
T d2bfwa1           1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKGD   76 (196)
T ss_dssp             CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCBC
T ss_pred             CcChhhcCCCCCCchhHHHHHHHHHHhCCCCC--CEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeecc
Confidence            78888886542      234567889999644  5688999996 689999999999999654211  789999999875


Q ss_pred             ch--hHHh----hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCC
Q 011355          339 WG--ARYR----DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTD  412 (488)
Q Consensus       339 ~~--~~~~----~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~  412 (488)
                      ..  ...+    .....+.+.|.++.+++..+|+.||++|+||. .||+|.+++|||+||+|||+++.+++. +++. ++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~-~e~~~~~~~Eam~~G~pvI~~~~~~~~-e~i~-~~  153 (196)
T d2bfwa1          77 PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSY-FEPFGLVALEAMCLGAIPIASAVGGLR-DIIT-NE  153 (196)
T ss_dssp             HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCS-CCSSCHHHHHHHHTTCEEEEESCHHHH-HHCC-TT
T ss_pred             cchhhhhhhhhhccceeEEeeeccccccchhccccccccccccc-cccccccchhhhhcCceeeecCCCccc-eeec-CC
Confidence            43  2222    23466778899999999999999999999997 599999999999999999999999987 7664 56


Q ss_pred             ceeEeCC-CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCC
Q 011355          413 MGYLFSP-QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFT  455 (488)
Q Consensus       413 ~g~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs  455 (488)
                      +|+++++ |+++++++|.+++..+++.+.+|+++|++++.+ ||
T Consensus       154 ~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~-fs  196 (196)
T d2bfwa1         154 TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS-FS  196 (196)
T ss_dssp             TCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred             ceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC
Confidence            8999999 999999999999985489999999999999865 76

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=4.7e-25  Score=214.90  Aligned_cols=279  Identities=14%  Similarity=0.106  Sum_probs=205.4

Q ss_pred             CCcEEEeCCcc---hHHhhhccCC--cEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHHHHHhhhcCCccEE
Q 011355          164 PFDVIHTESVG---LRHTRARNLT--NVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKVVEEVKFFPKYAHH  238 (488)
Q Consensus       164 ~~Dvv~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i  238 (488)
                      .-|+|++|++.   ++..+....|  ++...+|..++..   +.    ++..  +..+.+          +..+-.+|.|
T Consensus       122 ~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~---~~----fr~l--p~~~~i----------l~~ll~~d~i  182 (456)
T d1uqta_         122 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTP---EI----FNAL--PTYDTL----------LEQLCDYDLL  182 (456)
T ss_dssp             TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCH---HH----HTTS--TTHHHH----------HHHHTTSSEE
T ss_pred             CCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCCh---HH----hccC--cchHHH----------HHHhhccccc
Confidence            56999999854   4444444333  2777888754321   11    1110  111111          1334578888


Q ss_pred             EEcChhhHHHHHHHh----cC------------CCCcEEEecCCccCCCcCCCc-----ccchhhhhhhCCCCCCcEEEE
Q 011355          239 VATSDHCGDVLKRIY----MI------------PEERVHVILNGVDEEVFKPDV-----AMGKDFKKKFGIPENRSLVLG  297 (488)
Q Consensus       239 i~~S~~~~~~~~~~~----g~------------~~~~i~vi~ngvd~~~~~~~~-----~~~~~~r~~~~i~~~~~~~i~  297 (488)
                      ...+....+.+.+..    +.            ...++.++|+|+|.+.+....     ....++++++   .++ .+|+
T Consensus       183 gf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~---~~~-~~il  258 (456)
T d1uqta_         183 GFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL---KNV-QNIF  258 (456)
T ss_dssp             EESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT---TTC-EEEE
T ss_pred             cccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhc---CCC-eEEE
Confidence            988877776665421    11            123678999999987664321     1123344444   244 7888


Q ss_pred             EEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchh---------HHhh-------------hCCcEEEeCc
Q 011355          298 MAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGA---------RYRD-------------LGTNVIVLGP  355 (488)
Q Consensus       298 ~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~---------~~~~-------------l~~~V~~~g~  355 (488)
                      ++||+++.||++.+++|+.++.+++++++.++.++.+|.+...+         ++.+             ..+.+.+.+.
T Consensus       259 ~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~  338 (456)
T d1uqta_         259 SVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQH  338 (456)
T ss_dssp             EECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSC
T ss_pred             EeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCC
Confidence            99999999999999999999999996666678888888654221         1111             2366889999


Q ss_pred             cCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCc-----EEEeCCCCcccceeecCCceeEeCC-CHHHHHHHHH
Q 011355          356 LDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKP-----LMATRLASIVGSVIVGTDMGYLFSP-QVESVKKALY  429 (488)
Q Consensus       356 v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~P-----VI~~~~~~~~~e~v~~~~~g~l~~~-d~~~la~~i~  429 (488)
                      ++.+++..+|+.||+++.||.+ ||||++++|||+||+|     ||+|+.+|.. +.+.   .|++++| |++++|++|.
T Consensus       339 ~~~~~l~a~~~~Adv~v~~s~~-EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~-~~l~---~g~lVnP~d~~~~A~ai~  413 (456)
T d1uqta_         339 FDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-NELT---SALIVNPYDRDEVAAALD  413 (456)
T ss_dssp             CCHHHHHHHHHHCSEEEECCSS-BSCCHHHHHHHHHSCTTSCCEEEEETTBGGG-GTCT---TSEEECTTCHHHHHHHHH
T ss_pred             cCHHHHhHHHhhhceeecCCcc-CCCCcHHHHHHHhCCCCCCCcEEEeCCCCCH-HHhC---CeEEECcCCHHHHHHHHH
Confidence            9999999999999999999986 9999999999999999     9999999998 5553   4899999 9999999999


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Q 011355          430 GIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLFLCIS  471 (488)
Q Consensus       430 ~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~  471 (488)
                      +++++++++++++.+++++++.+ ||+...++.+.+-++++.
T Consensus       414 ~aL~~~~~er~~~~~~~~~~v~~-~~~~~W~~~fl~~l~~~~  454 (456)
T d1uqta_         414 RALTMSLAERISRHAEMLDVIVK-NDINHWQECFISDLKQIV  454 (456)
T ss_dssp             HHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHSC
T ss_pred             HHHcCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHhhc
Confidence            99998789999999999999976 899999999888887753

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=1.3e-25  Score=188.96  Aligned_cols=130  Identities=23%  Similarity=0.346  Sum_probs=115.4

Q ss_pred             EEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchh---HH----hh-hCCcEEEeCccCHHHHHHHHHh
Q 011355          296 LGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGA---RY----RD-LGTNVIVLGPLDQTRLAMFYNA  367 (488)
Q Consensus       296 i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~---~~----~~-l~~~V~~~g~v~~~~l~~~~~~  367 (488)
                      ++|+||+.++||++.+++|++++        ++.+++|+|.++..+   .+    ++ ..++|+|+|+++.+++.++|+.
T Consensus        15 ~l~iGrl~~~K~~~~~i~a~~~l--------~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~   86 (166)
T d2f9fa1          15 WLSVNRIYPEKRIELQLEVFKKL--------QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR   86 (166)
T ss_dssp             EEEECCSSGGGTHHHHHHHHHHC--------TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred             EEEEecCccccCHHHHHHHHHHh--------cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccc
Confidence            56999999999999999999887        677899999765432   22    12 3479999999999999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcC
Q 011355          368 IDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADG  435 (488)
Q Consensus       368 adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~  435 (488)
                      ||++|+||. .|++|++++|||++|+|||+++.++.. |++.++.+|+++++|+++++++|.++++++
T Consensus        87 ad~~i~ps~-~e~~~~~~~Ea~~~g~pvi~s~~~~~~-e~i~~~~~g~~~~~d~~~~~~~i~~l~~~~  152 (166)
T d2f9fa1          87 CKGLLCTAK-DEDFGLTPIEAMASGKPVIAVNEGGFK-ETVINEKTGYLVNADVNEIIDAMKKVSKNP  152 (166)
T ss_dssp             CSEEEECCS-SCCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBTTTEEEECSCHHHHHHHHHHHHHCT
T ss_pred             ccccccccc-cccccccccccccccccceeecCCcce-eeecCCcccccCCCCHHHHHHHHHHHHhCH
Confidence            999999997 599999999999999999999999988 899999999988779999999999999993

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=3.9e-11  Score=112.17  Aligned_cols=111  Identities=22%  Similarity=0.205  Sum_probs=81.4

Q ss_pred             hCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc------ceeecCCceeEeCC
Q 011355          346 LGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG------SVIVGTDMGYLFSP  419 (488)
Q Consensus       346 l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~------e~v~~~~~g~l~~~  419 (488)
                      ...++...++.+  ++.++|+.||++|.   + .| +.++.|++++|+|+|....+...+      +.+++.+.|..++.
T Consensus       229 ~~~~~~v~~f~~--~~~~lm~~adl~It---~-~G-~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~  301 (351)
T d1f0ka_         229 GQPQHKVTEFID--DMAAAYAWADVVVC---R-SG-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQ  301 (351)
T ss_dssp             TCTTSEEESCCS--CHHHHHHHCSEEEE---C-CC-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCG
T ss_pred             ccccceeeeehh--hHHHHHHhCchhhc---c-cc-chHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEech
Confidence            457888999965  89999999999996   2 23 479999999999999876543221      34667778888874


Q ss_pred             ---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 011355          420 ---QVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKMAAAYERLF  467 (488)
Q Consensus       420 ---d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~  467 (488)
                         +.+.+.++|..+  + ++.+.+|++++++.... -..+.+++.++++-
T Consensus       302 ~~~~~e~l~~~l~~l--~-~~~~~~~~~~~~~~~~~-~~a~~i~~~i~~l~  348 (351)
T d1f0ka_         302 PQLSVDAVANTLAGW--S-RETLLTMAERARAASIP-DATERVANEVSRVA  348 (351)
T ss_dssp             GGCCHHHHHHHHHTC--C-HHHHHHHHHHHHHTCCT-THHHHHHHHHHHHH
T ss_pred             hhCCHHHHHHHHHhh--C-HHHHHHHHHHHHccCCc-cHHHHHHHHHHHHH
Confidence               578888887775  4 67788899998876543 24666666666554

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.32  E-value=9.7e-12  Score=118.61  Aligned_cols=124  Identities=14%  Similarity=0.106  Sum_probs=82.4

Q ss_pred             EEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEe
Q 011355          294 LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVN  373 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~  373 (488)
                      .++++.|...... ...+.+.+.......    +...++..|..  ......+.+||.+.+++|+.   +++..+|++|.
T Consensus       239 ~v~~~~gs~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~v~~~~~~p~~---~ll~~~~~~I~  308 (401)
T d1rrva_         239 PVHIGFGSSSGRG-IADAAKVAVEAIRAQ----GRRVILSRGWT--ELVLPDDRDDCFAIDEVNFQ---ALFRRVAAVIH  308 (401)
T ss_dssp             CEEECCTTCCSHH-HHHHHHHHHHHHHHT----TCCEEEECTTT--TCCCSCCCTTEEEESSCCHH---HHGGGSSEEEE
T ss_pred             eEEEECCccccCC-HHHHHHHHHHHHhhc----CCeEEEecccc--ccccccCCCCEEEEeccCcH---HHhhhccEEEe
Confidence            5555666654332 223333333333333    34434443322  22334567899999999865   45678999996


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC---CHHHHHHHHHHHHh
Q 011355          374 PTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP---QVESVKKALYGIWA  433 (488)
Q Consensus       374 ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~---d~~~la~~i~~ll~  433 (488)
                           .|...++.||+++|+|+|+....+    .. +.+++.+.|..++.   ++++|+++|.++++
T Consensus       309 -----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na-~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~  369 (401)
T d1rrva_         309 -----HGSAGTEHVATRAGVPQLVIPRNTDQPYFA-GRVAALGIGVAHDGPTPTFESLSAALTTVLA  369 (401)
T ss_dssp             -----CCCHHHHHHHHHHTCCEEECCCSBTHHHHH-HHHHHHTSEEECSSSCCCHHHHHHHHHHHTS
T ss_pred             -----cCCchHHHHHHHhCCCEEEecccccHHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhC
Confidence                 344679999999999999987765    22 45666688988876   58999999999984

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.31  E-value=2.7e-10  Score=106.88  Aligned_cols=347  Identities=13%  Similarity=0.033  Sum_probs=182.8

Q ss_pred             CceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCC----CC-CceEEEecCCCCccCcchh
Q 011355           75 KLLKIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCSFPT----YP-ISSLYFHLSKPTAAGYLDQ  148 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~----~~-~~~i~~~~~~~~~~~~~~~  148 (488)
                      ++|||++|+..      ..- -.-+..++++|.+. +.++.++..+........    .. .+.+.+.............
T Consensus         1 ~k~Ki~~v~Gt------R~e-~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   73 (377)
T d1o6ca_           1 KKLKVMTVFGT------RPE-AIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEIT   73 (377)
T ss_dssp             CCEEEEEEECS------HHH-HHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHH
T ss_pred             CCceEEEEEEc------hHh-HHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCCCceeeecCCCCCCHHHHH
Confidence            58999999852      111 23456889999876 678888886642111100    11 1222222221111011112


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEeCCc---ch---HHhhhccCCcEEEeeeC-CcchhhhhhhhHhhhcCCCChhHHHHHHH
Q 011355          149 SIVWQQLQTQNSTGKPFDVIHTESV---GL---RHTRARNLTNVVVSWHG-IAYETIHSDIIQELLRTPEEPQAYALAER  221 (488)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Dvv~~~~~---~~---~~~~~~~~p~~v~~~h~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      ......+.....+. +||+|++++-   .+   ......++| + ..+|+ ..........+            ....+ 
T Consensus        74 ~~~i~~~~~~~~~~-kpD~v~v~GDr~e~la~a~aa~~~~Ip-i-~HiegG~~s~~~~~~~~------------de~~R-  137 (377)
T d1o6ca_          74 SNALVRLDELFKDI-KPDIVLVHGDTTTTFAGSLAAFYHQIA-V-GHVEAGLRTGNKYSPFP------------EELNR-  137 (377)
T ss_dssp             HHHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHHHTTCE-E-EEESCCCCCSCTTTTTT------------HHHHH-
T ss_pred             HHHHHhhhhhhhhc-ccceeEeeecccccchhhhhhhhccce-E-EEEecccccccccccCc------------hhhhc-
Confidence            22333333333333 8999999862   12   222233556 4 33333 11100000000            11111 


Q ss_pred             HHHHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCC-ccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEe
Q 011355          222 ASKVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNG-VDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAG  300 (488)
Q Consensus       222 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  300 (488)
                        ....     +-+|..++.++..++.+.+ .|.++.++.++++. +|.-.......   .....+.....+++++++.-
T Consensus       138 --~~is-----kls~~hf~~t~~~~~~L~~-~G~~~~~I~~vG~~~~D~i~~~~~~~---~~~~~~~~~~~~~~ilvt~H  206 (377)
T d1o6ca_         138 --QMTG-----AIADLHFAPTGQAKDNLLK-ENKKADSIFVTGNTAIDALNTTVRDG---YSHPVLDQVGEDKMILLTAH  206 (377)
T ss_dssp             --HHHH-----HHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSS---CCCSTTTTTTTSEEEEECC-
T ss_pred             --cccc-----cceeEEeecchhhhhhhhh-hccccceEeeccchhHHHHHHHHHHH---HhhhhhhhccCCceEEEEec
Confidence              1111     2378889999999999999 79999999999984 45311111100   00111122223446666655


Q ss_pred             eeccc-cChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--hHHhh---hCCcEEEeCccCHHHHHHHHHhcCEEEeC
Q 011355          301 RLVKD-KGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--ARYRD---LGTNVIVLGPLDQTRLAMFYNAIDIFVNP  374 (488)
Q Consensus       301 rl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--~~~~~---l~~~V~~~g~v~~~~l~~~~~~adv~v~p  374 (488)
                      |.... +.....+.++..+....    .++.+++.......  ....+   ..++|.+...++..+...++..|+++|.-
T Consensus       207 r~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgn  282 (377)
T d1o6ca_         207 RRENLGEPMENMFKAIRRIVGEF----EDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTD  282 (377)
T ss_dssp             ---------HHHHHHHHHHHHHC----TTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC
T ss_pred             cccccccchHHHHHHHHhhcccc----cccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeecc
Confidence            54432 33345556666665555    56665544332222  11111   23789999999999999999999999964


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhC
Q 011355          375 TLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLF  454 (488)
Q Consensus       375 s~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~f  454 (488)
                      |      |....||-.+|+|+|.-....-+.+.+..+ +-.+++.|.+++.+++..++.+ +..++.+.+     ...-|
T Consensus       283 S------ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~~~~~I~~~i~~~l~~-~~~~~~~~~-----~~npY  349 (377)
T d1o6ca_         283 S------GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGTDEENIYQLAKQLLTD-PDEYKKMSQ-----ASNPY  349 (377)
T ss_dssp             --------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECSCHHHHHHHHHHHHHC-HHHHHHHHH-----CCCTT
T ss_pred             c------chhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEECCCCHHHHHHHHHHHHhC-hHHHhhhcc-----CCCCC
Confidence            4      235789999999999875433232444444 4466766999999999999998 655544322     11224


Q ss_pred             CHHHHHHHHHHHHHHhhc
Q 011355          455 TATKMAAAYERLFLCISN  472 (488)
Q Consensus       455 s~~~~~~~~~~~~~~~~~  472 (488)
                      .-...++++.+++.+-.+
T Consensus       350 GdG~as~rI~~~L~~~~~  367 (377)
T d1o6ca_         350 GDGEASRRIVEELLFHYG  367 (377)
T ss_dssp             CCSCHHHHHHHHHHHHTT
T ss_pred             CCChHHHHHHHHHHHhhC
Confidence            333444555554444333

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.23  E-value=6.1e-11  Score=112.49  Aligned_cols=126  Identities=14%  Similarity=0.133  Sum_probs=81.1

Q ss_pred             EEEEEEeeeccccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhhCCcEEEeCccCHHHHHHHHHhcCEEEe
Q 011355          294 LVLGMAGRLVKDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDLGTNVIVLGPLDQTRLAMFYNAIDIFVN  373 (488)
Q Consensus       294 ~~i~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~  373 (488)
                      .+.+..|... ..+...+.+.+.......     +..+++.+.+. ........++|.+.|++++.   .++..+|++|.
T Consensus       223 ~v~~~~~~~~-~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~-~~~~~~~~~~v~i~~~~p~~---~ll~~a~~~v~  292 (391)
T d1pn3a_         223 PVYVGFGSSS-RPATADAAKMAIKAVRAS-----GRRIVLSRGWA-DLVLPDDGADCFVVGEVNLQ---ELFGRVAAAIH  292 (391)
T ss_dssp             CEEEECTTCC-STHHHHHHHHHHHHHHHT-----TCCEEEECTTT-TCCCSSCCTTCCEESSCCHH---HHHTTSSCEEE
T ss_pred             eEEEeccccc-cccHHHHHHHHHHHHHhc-----CCEEEEecccc-ccccccCCCCEEEecccCHH---HHHhhccEEEe
Confidence            4444444432 233344444443333332     33444444322 22233456899999999855   45789999997


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEEeCCCCcc-------cceeecCCceeEeCC---CHHHHHHHHHHHHhc
Q 011355          374 PTLRAQGLDHTVLEAMLSGKPLMATRLASIV-------GSVIVGTDMGYLFSP---QVESVKKALYGIWAD  434 (488)
Q Consensus       374 ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~-------~e~v~~~~~g~l~~~---d~~~la~~i~~ll~~  434 (488)
                      .+    | ..++.|||++|+|+|+....+-.       .+.+.+.+.|..++.   +.++++++|.+++++
T Consensus       293 hg----G-~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~  358 (391)
T d1pn3a_         293 HD----S-AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAP  358 (391)
T ss_dssp             ES----C-HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTST
T ss_pred             cC----c-hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence            44    2 46899999999999998765421       134566678888876   589999999999964

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=99.22  E-value=1e-09  Score=102.74  Aligned_cols=342  Identities=14%  Similarity=0.032  Sum_probs=197.3

Q ss_pred             EEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCC----CCCCCCc-eEEEecCCCCccCcchhHHH
Q 011355           78 KIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCS----FPTYPIS-SLYFHLSKPTAAGYLDQSIV  151 (488)
Q Consensus        78 kIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~----~~~~~~~-~i~~~~~~~~~~~~~~~~~~  151 (488)
                      ||++++..      ..- -..+..+.++|.+. ++++.++..+.....    ....+.. ...+................
T Consensus         4 kI~~v~Gt------R~e-~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~   76 (373)
T d1v4va_           4 RVVLAFGT------RPE-ATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARI   76 (373)
T ss_dssp             EEEEEECS------HHH-HHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHH
T ss_pred             eEEEEEEh------hHH-HHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchhcCCCccccCCCCCCCCCHHHHHHHH
Confidence            79988852      111 23456799999875 789888877642110    0001111 11111111111111122334


Q ss_pred             HHHHHHHhcCCCCCcEEEeCCc---ch---HHhhhccCCcEEEeeeCCcchhhhhhhhHhhhcCCCChhHHHHHHHHHHH
Q 011355          152 WQQLQTQNSTGKPFDVIHTESV---GL---RHTRARNLTNVVVSWHGIAYETIHSDIIQELLRTPEEPQAYALAERASKV  225 (488)
Q Consensus       152 ~~~~~~~~~~~~~~Dvv~~~~~---~~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      ...+.+...+. +||+|++++-   .+   ......++| +++.--|.........++            ....+.... 
T Consensus        77 ~~~~~~~l~~~-kPD~vlv~GDr~e~la~a~aa~~~~ip-i~HiegG~rsg~~~~~~~------------de~~R~~is-  141 (373)
T d1v4va_          77 LPQAARALKEM-GADYVLVHGDTLTTFAVAWAAFLEGIP-VGHVEAGLRSGNLKEPFP------------EEANRRLTD-  141 (373)
T ss_dssp             HHHHHHHHHHT-TCSEEEEESSCHHHHHHHHHHHHTTCC-EEEETCCCCCSCTTSSTT------------HHHHHHHHH-
T ss_pred             HHHHhhhhhhc-CcccccccccCccchhHHHHHHHhhhh-heeecccccccccccCcc------------hhhhhhhhc-
Confidence            44444444444 8999999852   12   222334566 444333222111111111            111111111 


Q ss_pred             HHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecCC-ccCCCcCCCcccchhhhhhhCCCCCCcEEEEEEeeecc
Q 011355          226 VEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILNG-VDEEVFKPDVAMGKDFKKKFGIPENRSLVLGMAGRLVK  304 (488)
Q Consensus       226 ~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Grl~~  304 (488)
                             +-++..++.++..++.+.+ .|.++.++.++++. +|.-.  ..   ....+.....+.++ +.+++.-+...
T Consensus       142 -------kls~~hf~~t~~~~~~L~~-~Ge~~~~I~~vG~p~~D~i~--~~---~~~~~~~~~~~~~~-~~lvt~hr~~n  207 (373)
T d1v4va_         142 -------VLTDLDFAPTPLAKANLLK-EGKREEGILVTGQTGVDAVL--LA---AKLGRLPEGLPEGP-YVTVTMHRREN  207 (373)
T ss_dssp             -------HHCSEEEESSHHHHHHHHT-TTCCGGGEEECCCHHHHHHH--HH---HHHCCCCTTCCSSC-EEEECCCCGGG
T ss_pred             -------cccceeeecchhhhhhhhh-hcccccceeecccchhhHHH--hh---hhhccccccccccc-ceeEEeccccc
Confidence                   2378889999999999999 79999999999984 44210  00   01111122233344 77777777776


Q ss_pred             ccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--hHHh---hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCC
Q 011355          305 DKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--ARYR---DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQ  379 (488)
Q Consensus       305 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--~~~~---~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~e  379 (488)
                      .++...+++++..+.+..    .++.+++.......  ....   +..+++.+...++..+...++..|++++.-|    
T Consensus       208 ~~~~~~~~~~~~~~~~~~----~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS----  279 (373)
T d1v4va_         208 WPLLSDLAQALKRVAEAF----PHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS----  279 (373)
T ss_dssp             GGGHHHHHHHHHHHHHHC----TTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC----
T ss_pred             cchHHHHHHHHHHHhhhc----ccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEeccc----
Confidence            677788888888888777    67766654432211  1111   2337899999999999999999999999755    


Q ss_pred             CCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHH
Q 011355          380 GLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRGLNLFTATKM  459 (488)
Q Consensus       380 g~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~~~~fs~~~~  459 (488)
                        |..+.||.++|+|+|.-...+-+.+-+..+.+ .++..|.+++.+++..++++ ++.+..+...     ..-|.--+.
T Consensus       280 --ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv~~d~~~I~~~i~~~l~~-~~~~~~~~~~-----~npYGdG~a  350 (373)
T d1v4va_         280 --GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLAGTDPEGVYRVVKGLLEN-PEELSRMRKA-----KNPYGDGKA  350 (373)
T ss_dssp             --HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EECCSCHHHHHHHHHHHHTC-HHHHHHHHHS-----CCSSCCSCH
T ss_pred             --chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEcCCCHHHHHHHHHHHHcC-HHHHhhcccC-----CCCCCCCHH
Confidence              34678999999999988443333355555544 45555999999999999998 7666554331     122433344


Q ss_pred             HHHHHHHHHHhhc
Q 011355          460 AAAYERLFLCISN  472 (488)
Q Consensus       460 ~~~~~~~~~~~~~  472 (488)
                      ++++.+.+.+-+.
T Consensus       351 s~rI~~~L~~~~~  363 (373)
T d1v4va_         351 GLMVARGVAWRLG  363 (373)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhC
Confidence            4455555544443

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.21  E-value=1.7e-09  Score=101.07  Aligned_cols=345  Identities=12%  Similarity=0.074  Sum_probs=190.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCC----CC-CceEEEecCCCCccCcchhHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKR-GHELHIFTASCLNCSFPT----YP-ISSLYFHLSKPTAAGYLDQSI  150 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~----~~-~~~i~~~~~~~~~~~~~~~~~  150 (488)
                      |||++|+.      .... --.+..+.++|.+. +.++.++..+........    .. .+...+...............
T Consensus         1 MKi~~v~G------tR~e-~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (376)
T d1f6da_           1 MKVLTVFG------TRPE-AIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCR   73 (376)
T ss_dssp             CEEEEEEC------SHHH-HHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHH
T ss_pred             CeEEEEEE------hhHh-HHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccccCCCCCCHHHHHHH
Confidence            89999985      2222 23456889999876 689999987643111000    11 122222211111100011222


Q ss_pred             HHHHHHHHhcCCCCCcEEEeCCc---ch---HHhhhccCCcEEEeeeC-CcchhhhhhhhHhhhcCCCChhHHHHHHHHH
Q 011355          151 VWQQLQTQNSTGKPFDVIHTESV---GL---RHTRARNLTNVVVSWHG-IAYETIHSDIIQELLRTPEEPQAYALAERAS  223 (488)
Q Consensus       151 ~~~~~~~~~~~~~~~Dvv~~~~~---~~---~~~~~~~~p~~v~~~h~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      ....+.....+. +||+|++++-   .+   ......++| ++ .+|+ ..........+.           ......+.
T Consensus        74 ~i~~~~~~~~~~-kPD~v~v~GDr~e~la~a~aa~~~~ip-i~-HiegG~~s~~~~~~~pd-----------e~~R~~is  139 (376)
T d1f6da_          74 ILEGLKPILAEF-KPDVVLVHGDTTTTLATSLAAFYQRIP-VG-HVEAGLRTGDLYSPWPE-----------EANRTLTG  139 (376)
T ss_dssp             HHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHHTTTCC-EE-EESCCCCCSCTTSSTTH-----------HHHHHHHH
T ss_pred             HHHhhHHHHHhc-cCcceeeeccccchhhHHHHHHhhCce-EE-EEecccccccccccCch-----------hhhhhhhc
Confidence            223333333222 8999999851   12   223334566 44 3443 211111001111           11111111


Q ss_pred             HHHHHhhhcCCccEEEEcChhhHHHHHHHhcCCCCcEEEecC-CccCCC------cCCCcccchhhhhhhCCCCCCcEEE
Q 011355          224 KVVEEVKFFPKYAHHVATSDHCGDVLKRIYMIPEERVHVILN-GVDEEV------FKPDVAMGKDFKKKFGIPENRSLVL  296 (488)
Q Consensus       224 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~g~~~~~i~vi~n-gvd~~~------~~~~~~~~~~~r~~~~i~~~~~~~i  296 (488)
                               +-+|..+|.++..++.+.+ .|.++.+++++++ ++|.-.      ............+...+..++++++
T Consensus       140 ---------kls~~hf~~~~~~~~~L~~-~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  209 (376)
T d1f6da_         140 ---------HLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMIL  209 (376)
T ss_dssp             ---------HTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEE
T ss_pred             ---------cceeEEEeccHHHHhHHHh-cCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEE
Confidence                     3478889999999999999 8999999999998 455310      0011111122222333444554666


Q ss_pred             EEEeeec-cccChHHHHHHHHHhHhhccCCCCCeEEEEEeCCCch--hHHh---hhCCcEEEeCccCHHHHHHHHHhcCE
Q 011355          297 GMAGRLV-KDKGHPLMFEALKQLLAENDTFRRSTVFLVAGDGPWG--ARYR---DLGTNVIVLGPLDQTRLAMFYNAIDI  370 (488)
Q Consensus       297 ~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~--~~~~---~l~~~V~~~g~v~~~~l~~~~~~adv  370 (488)
                      ++.=+.. ..+....++.++..+.+..    .++.+++-......  ....   ...+++.+.+.+++.+...+++.|++
T Consensus       210 vt~H~~~~~~~~~~~i~~~l~~~~~~~----~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~  285 (376)
T d1f6da_         210 VTGHRRESFGRGFEEICHALADIATTH----QDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL  285 (376)
T ss_dssp             ECCCCBSSCCHHHHHHHHHHHHHHHHC----TTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred             EecccchhhhhhHHHHHHHHhhhhhhc----ceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceE
Confidence            5544433 2345677788888877766    66666555432211  1111   13478999999999999999999999


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCcccceeecCCceeEeCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011355          371 FVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVGSVIVGTDMGYLFSPQVESVKKALYGIWADGREVLEKKGLVARKRG  450 (488)
Q Consensus       371 ~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~e~v~~~~~g~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~  450 (488)
                      ++.-|      |..+.||-.+|+|+|.-..+.-..+.+..+ +-.++++|.+++.+++.+++++ +.....+     ...
T Consensus       286 vignS------ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~~~~~I~~ai~~~l~~-~~~~~~~-----~~~  352 (376)
T d1f6da_         286 ILTDS------GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGTDKQRIVEEVTRLLKD-ENEYQAM-----SRA  352 (376)
T ss_dssp             EEESS------SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCSSHHHHHHHHHHHHHC-HHHHHHH-----HHS
T ss_pred             EEecC------cchHhhHHHhCCCEEEcCCCccCccceecC-eeEECCCCHHHHHHHHHHHHhC-hHhhhhh-----ccC
Confidence            99755      235689999999999753322222344333 5566666999999999999987 4333222     111


Q ss_pred             hhhCCHHHHHHHHHHHHHH
Q 011355          451 LNLFTATKMAAAYERLFLC  469 (488)
Q Consensus       451 ~~~fs~~~~~~~~~~~~~~  469 (488)
                      ..-|.-.+.++++.+++++
T Consensus       353 ~npYGdG~as~rI~~iLk~  371 (376)
T d1f6da_         353 HNPYGDGQACSRILEALKN  371 (376)
T ss_dssp             CCTTCCSCHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHh
Confidence            2224333455555555544

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.12  E-value=3.1e-10  Score=107.75  Aligned_cols=81  Identities=15%  Similarity=0.261  Sum_probs=64.1

Q ss_pred             hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCC----cccceeecCCceeEeCC-
Q 011355          345 DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLAS----IVGSVIVGTDMGYLFSP-  419 (488)
Q Consensus       345 ~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~----~~~e~v~~~~~g~l~~~-  419 (488)
                      .+.+||++.+++++.   ++|..+|++|.     .|...++.||+++|+|+|+....+    .. +.+++.+.|..++. 
T Consensus       282 ~~~~nv~~~~~~p~~---~~l~~~~~~V~-----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na-~~l~~~G~g~~l~~~  352 (401)
T d1iira_         282 DDGADCFAIGEVNHQ---VLFGRVAAVIH-----HGGAGTTHVAARAGAPQILLPQMADQPYYA-GRVAELGVGVAHDGP  352 (401)
T ss_dssp             SCGGGEEECSSCCHH---HHGGGSSEEEE-----CCCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECSSS
T ss_pred             cCCCCEEEEeccCHH---HHHhhcCEEEe-----cCCchHHHHHHHhCCCEEEccccccHHHHH-HHHHHCCCEEEcCcC
Confidence            456899999999854   56788999995     344679999999999999976654    22 34566678888875 


Q ss_pred             --CHHHHHHHHHHHHhc
Q 011355          420 --QVESVKKALYGIWAD  434 (488)
Q Consensus       420 --d~~~la~~i~~ll~~  434 (488)
                        ++++++++|.+++++
T Consensus       353 ~~~~~~l~~ai~~~l~~  369 (401)
T d1iira_         353 IPTFDSLSAALATALTP  369 (401)
T ss_dssp             SCCHHHHHHHHHHHTSH
T ss_pred             CCCHHHHHHHHHHHhCH
Confidence              699999999999954

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=98.64  E-value=2.3e-05  Score=74.68  Aligned_cols=84  Identities=20%  Similarity=0.228  Sum_probs=62.1

Q ss_pred             hhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ce-eecCCceeEeCC-
Q 011355          345 DLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SV-IVGTDMGYLFSP-  419 (488)
Q Consensus       345 ~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~-v~~~~~g~l~~~-  419 (488)
                      ....|+.+..+.++.++. .+..+|+||.   + .| -.++.||+.+|+|+|+....+-..   .. ++..+.|+.++. 
T Consensus       327 ~~~~n~~v~~~~pq~~~l-~~p~~~~fIt---H-GG-~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~  400 (461)
T d2acva1         327 ELEGKGMICGWAPQVEVL-AHKAIGGFVS---H-CG-WNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD  400 (461)
T ss_dssp             HHHCSEEEESSCCHHHHH-HSTTEEEEEE---C-CC-HHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS
T ss_pred             ccCCCeEEEecCCHHHHH-hcccCCEEEe---c-CC-ccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecc
Confidence            356889999988766553 5689999996   3 34 469999999999999987654110   12 345567877652 


Q ss_pred             --------CHHHHHHHHHHHHhc
Q 011355          420 --------QVESVKKALYGIWAD  434 (488)
Q Consensus       420 --------d~~~la~~i~~ll~~  434 (488)
                              +.++++++|.+++++
T Consensus       401 ~~~~~~~~t~~~l~~a~~~vl~~  423 (461)
T d2acva1         401 YRKGSDVVAAEEIEKGLKDLMDK  423 (461)
T ss_dssp             CCTTCCCCCHHHHHHHHHHHTCT
T ss_pred             ccccCCccCHHHHHHHHHHHhhC
Confidence                    579999999999975

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=98.62  E-value=4.9e-06  Score=79.41  Aligned_cols=96  Identities=15%  Similarity=0.144  Sum_probs=68.2

Q ss_pred             hhhCCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---ceeec-CCceeEeCC
Q 011355          344 RDLGTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVIVG-TDMGYLFSP  419 (488)
Q Consensus       344 ~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v~~-~~~g~l~~~  419 (488)
                      .....||.+..++++.++.. ...+++||.   + .| ..++.||+.+|+|+|+....+-..   ..+.+ .+.|..++.
T Consensus       315 ~~~~~nv~~~~~~pq~~lL~-hp~~~~fIt---H-GG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~  388 (450)
T d2c1xa1         315 EKTRGYGMVVPWAPQAEVLA-HEAVGAFVT---H-CG-WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG  388 (450)
T ss_dssp             HHHTTTEEEESCCCHHHHHT-STTEEEEEE---C-CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG
T ss_pred             hhccccccccccCChHhhhc-cCceeEEEc---c-CC-ccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecC
Confidence            34568999999999664322 267888886   2 34 569999999999999987654211   23444 488888875


Q ss_pred             ---CHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011355          420 ---QVESVKKALYGIWADGREVLEKKGLVAR  447 (488)
Q Consensus       420 ---d~~~la~~i~~ll~~~~~~~~~~~~~a~  447 (488)
                         +.+++.++|.++++| +. +++.++++.
T Consensus       389 ~~~t~~~l~~ai~~vL~d-~~-y~~~~~r~~  417 (450)
T d2c1xa1         389 GVFTKSGLMSCFDQILSQ-EK-GKKLRENLR  417 (450)
T ss_dssp             GSCCHHHHHHHHHHHHHS-HH-HHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHhcC-cH-HHHHHHHHH
Confidence               789999999999998 43 333334443

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=98.50  E-value=1.6e-05  Score=76.02  Aligned_cols=96  Identities=15%  Similarity=0.161  Sum_probs=69.9

Q ss_pred             hhCCcEEEeCccCHHHHHHHH--HhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---cee-ecCCceeEeC
Q 011355          345 DLGTNVIVLGPLDQTRLAMFY--NAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVI-VGTDMGYLFS  418 (488)
Q Consensus       345 ~l~~~V~~~g~v~~~~l~~~~--~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v-~~~~~g~l~~  418 (488)
                      ....||.+..++|+.++   +  .++++||.   + .| ..++.||+.+|+|.|+....+-..   ..+ +..+.|..++
T Consensus       343 ~~~~Nv~~~~~~Pq~~l---L~hp~~~~fIt---H-GG-~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~  414 (473)
T d2pq6a1         343 EIADRGLIASWCPQDKV---LNHPSIGGFLT---H-CG-WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID  414 (473)
T ss_dssp             HHTTTEEEESCCCHHHH---HTSTTEEEEEE---C-CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred             hccCceEEeeeCCHHHH---hcCCcCcEEEe---c-CC-ccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence            35689999999997654   5  57888886   3 34 569999999999999987654211   224 3347888887


Q ss_pred             C--CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011355          419 P--QVESVKKALYGIWADGREVLEKKGLVARKRG  450 (488)
Q Consensus       419 ~--d~~~la~~i~~ll~~~~~~~~~~~~~a~~~~  450 (488)
                      .  +.++++++|.++++| +. .+++.++|.+..
T Consensus       415 ~~~t~~~l~~ai~~vl~d-~~-~~~~r~~a~~l~  446 (473)
T d2pq6a1         415 TNVKREELAKLINEVIAG-DK-GKKMKQKAMELK  446 (473)
T ss_dssp             SSCCHHHHHHHHHHHHTS-HH-HHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHHcC-Ch-HHHHHHHHHHHH
Confidence            5  899999999999998 54 234555555543

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.34  E-value=0.00024  Score=67.45  Aligned_cols=82  Identities=17%  Similarity=0.168  Sum_probs=58.9

Q ss_pred             CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEeCCCCccc---cee-ecCCceeEeCC---
Q 011355          347 GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMATRLASIVG---SVI-VGTDMGYLFSP---  419 (488)
Q Consensus       347 ~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~~~~~~~~---e~v-~~~~~g~l~~~---  419 (488)
                      .+||.+.+|+|+.++.. ..++++||.   + .| .+++.||+.+|+|+|+...-+-.-   ..+ +.-+.|+.+..   
T Consensus       333 ~~nv~~~~w~Pq~~lL~-hp~~~~fVt---H-GG-~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~~  406 (471)
T d2vcha1         333 KRGFVIPFWAPQAQVLA-HPSTGGFLT---H-CG-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD  406 (471)
T ss_dssp             TTEEEEESCCCHHHHHH-STTEEEEEE---C-CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTT
T ss_pred             CCCeeecccCCHHHHhc-CccCCEEEe---c-CC-ccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCCC
Confidence            47899999999775422 157888886   3 34 569999999999999987654110   123 33356765531   


Q ss_pred             ---CHHHHHHHHHHHHhc
Q 011355          420 ---QVESVKKALYGIWAD  434 (488)
Q Consensus       420 ---d~~~la~~i~~ll~~  434 (488)
                         +.++++++|.+++++
T Consensus       407 ~~~t~~~l~~ai~~vl~~  424 (471)
T d2vcha1         407 GLVRREEVARVVKGLMEG  424 (471)
T ss_dssp             SCCCHHHHHHHHHHHHTS
T ss_pred             CcCCHHHHHHHHHHHhCC
Confidence               679999999999988

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=7.1e-05  Score=68.49  Aligned_cols=108  Identities=17%  Similarity=0.130  Sum_probs=74.1

Q ss_pred             chhhhhhhCCCCCCcEEEEEEe-eeccccC--hHHHHHHHHHhHhhccCCCCCeEEEEEeCCCchhHHhhh---------
Q 011355          279 GKDFKKKFGIPENRSLVLGMAG-RLVKDKG--HPLMFEALKQLLAENDTFRRSTVFLVAGDGPWGARYRDL---------  346 (488)
Q Consensus       279 ~~~~r~~~~i~~~~~~~i~~~G-rl~~~Kg--~~~ll~a~~~l~~~~~~~~~~~~l~ivG~g~~~~~~~~l---------  346 (488)
                      .....+++++..+++.+++..| +..+.|.  .+...+....+.++      +..++++|.+.+.+..+.+         
T Consensus       167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~------~~~ivl~g~~~e~~~~~~~~~~~~~~~~  240 (348)
T d1pswa_         167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE------GYQVVLFGSAKDHEAGNEILAALNTEQQ  240 (348)
T ss_dssp             HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT------TCEEEECCCGGGHHHHHHHHTTSCHHHH
T ss_pred             HHHHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhhc------CCccccccccchHHHHHHHHHhhhcccc
Confidence            3456667777777756666665 3334454  34577777777664      4567888866555444332         


Q ss_pred             CCcEEEeCccCHHHHHHHHHhcCEEEeCCCCCCCCChHHHHHHHcCCcEEEe
Q 011355          347 GTNVIVLGPLDQTRLAMFYNAIDIFVNPTLRAQGLDHTVLEAMLSGKPLMAT  398 (488)
Q Consensus       347 ~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~~eg~~~~~lEAma~G~PVI~~  398 (488)
                      ..-+.+.|..+-.|+..+++.||++|.+..      ..+--|.++|+|+|+-
T Consensus       241 ~~~~~l~g~~sl~el~~li~~a~l~I~~Dt------g~~HlAaa~g~p~i~l  286 (348)
T d1pswa_         241 AWCRNLAGETQLDQAVILIAACKAIVTNDS------GLMHVAAALNRPLVAL  286 (348)
T ss_dssp             TTEEECTTTSCHHHHHHHHHTSSEEEEESS------HHHHHHHHTTCCEEEE
T ss_pred             cccccccCCccHHHHHHHHhcceeEeecCc------cHHHHHHHcCCCEEEE
Confidence            123456788888999999999999998542      2567799999999985

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.50  E-value=0.002  Score=63.89  Aligned_cols=186  Identities=15%  Similarity=0.153  Sum_probs=123.8

Q ss_pred             cCCccEEEEcChhhHHHHHHH-----hcCCCCcEEEecCCccCCCcCCCc------------------------------
Q 011355          232 FPKYAHHVATSDHCGDVLKRI-----YMIPEERVHVILNGVDEEVFKPDV------------------------------  276 (488)
Q Consensus       232 ~~~~d~ii~~S~~~~~~~~~~-----~g~~~~~i~vi~ngvd~~~~~~~~------------------------------  276 (488)
                      +..+..+-.+|.-..+.+++.     +.+.+.++.-+-|||.....-...                              
T Consensus       435 l~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~  514 (824)
T d2gj4a1         435 IAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYV  514 (824)
T ss_dssp             HHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGT
T ss_pred             HHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhC
Confidence            345566777887776666552     344567899999999876542100                              


Q ss_pred             cc--------------c----hhhhhhhC--CCCCCcEEEEEEeeeccccChHHHH----HHHHHhHhhccCCCCCeEEE
Q 011355          277 AM--------------G----KDFKKKFG--IPENRSLVLGMAGRLVKDKGHPLMF----EALKQLLAENDTFRRSTVFL  332 (488)
Q Consensus       277 ~~--------------~----~~~r~~~~--i~~~~~~~i~~~Grl~~~Kg~~~ll----~a~~~l~~~~~~~~~~~~l~  332 (488)
                      .+              +    ..++++.|  +.++. +.++++-|+..+|...+.+    ..+.++++....-..++.++
T Consensus       515 ~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~-lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~I  593 (824)
T d2gj4a1         515 DDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNS-LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVM  593 (824)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEE
T ss_pred             CCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcch-hhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEE
Confidence            00              0    11222333  55555 8899999999999987733    33345544211000368999


Q ss_pred             EEeC-CCchh----HHh---hh----------C--CcEEEeCccCHHHHHHHHHhcCEEEeCCCC-CCCCChHHHHHHHc
Q 011355          333 VAGD-GPWGA----RYR---DL----------G--TNVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLS  391 (488)
Q Consensus       333 ivG~-g~~~~----~~~---~l----------~--~~V~~~g~v~~~~l~~~~~~adv~v~ps~~-~eg~~~~~lEAma~  391 (488)
                      +.|+ .|...    .++   ++          +  -+|.|+...+-+--..++.+|||..+.|+. -|..|..-+=+|..
T Consensus       594 FaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN  673 (824)
T d2gj4a1         594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN  673 (824)
T ss_dssp             EECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred             EeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc
Confidence            9997 33221    121   11          1  268999988877888899999999987663 47889999999999


Q ss_pred             CCcEEEeCCCCcccceeec--CCceeEeCC
Q 011355          392 GKPLMATRLASIVGSVIVG--TDMGYLFSP  419 (488)
Q Consensus       392 G~PVI~~~~~~~~~e~v~~--~~~g~l~~~  419 (488)
                      |.+.+++--|... |+.++  +++|+.|-.
T Consensus       674 Gal~lstlDGwnv-Ei~~~vg~~N~~~fG~  702 (824)
T d2gj4a1         674 GALTIGTMDGANV-EMAEEAGEENFFIFGM  702 (824)
T ss_dssp             TCEEEECSCTTHH-HHHHHHCGGGSEECSC
T ss_pred             CCeeeccccchHH-HHHHhcCcccEEEeCC
Confidence            9999999888877 66553  678898864

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.0022  Score=63.44  Aligned_cols=185  Identities=15%  Similarity=0.101  Sum_probs=122.5

Q ss_pred             CCccEEEEcChhhHHHHHHH-----hcCCCCcEEEecCCccCCCcCCC--------------------cc---------c
Q 011355          233 PKYAHHVATSDHCGDVLKRI-----YMIPEERVHVILNGVDEEVFKPD--------------------VA---------M  278 (488)
Q Consensus       233 ~~~d~ii~~S~~~~~~~~~~-----~g~~~~~i~vi~ngvd~~~~~~~--------------------~~---------~  278 (488)
                      ..+..+-.+|+-..+..++.     +.+-+.++.-|-|||.....-..                    ..         .
T Consensus       412 ~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~  491 (796)
T d1l5wa_         412 VGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFAD  491 (796)
T ss_dssp             HHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGG
T ss_pred             HhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhccC
Confidence            45667888998877765542     23446789999999975432110                    00         0


Q ss_pred             c-------------------hhhhhhhC--CCCCCcEEEEEEeeeccccChHHHHHHHH----HhHhhccCCCCCeEEEE
Q 011355          279 G-------------------KDFKKKFG--IPENRSLVLGMAGRLVKDKGHPLMFEALK----QLLAENDTFRRSTVFLV  333 (488)
Q Consensus       279 ~-------------------~~~r~~~~--i~~~~~~~i~~~Grl~~~Kg~~~ll~a~~----~l~~~~~~~~~~~~l~i  333 (488)
                      .                   ...+++.|  +.++. +.++++-|+..+|...+++.-..    .++.....-+.++.+++
T Consensus       492 d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~-LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~If  570 (796)
T d1l5wa_         492 DAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQA-IFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLF  570 (796)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhh-ccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEE
Confidence            0                   01122233  45565 89999999999999887543332    33321100012589999


Q ss_pred             EeC-CCch----hHHh---hh----------C--CcEEEeCccCHHHHHHHHHhcCEEEeCCCC-CCCCChHHHHHHHcC
Q 011355          334 AGD-GPWG----ARYR---DL----------G--TNVIVLGPLDQTRLAMFYNAIDIFVNPTLR-AQGLDHTVLEAMLSG  392 (488)
Q Consensus       334 vG~-g~~~----~~~~---~l----------~--~~V~~~g~v~~~~l~~~~~~adv~v~ps~~-~eg~~~~~lEAma~G  392 (488)
                      .|+ .|..    +.++   ++          +  -+|.|+...+-+--..++..|||-++.+.+ -|..|..-+=|+..|
T Consensus       571 aGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG  650 (796)
T d1l5wa_         571 GAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG  650 (796)
T ss_dssp             ECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcC
Confidence            997 3322    1111   11          1  169999988777888899999999986652 488899999999999


Q ss_pred             CcEEEeCCCCcccceeec--CCceeEeCC
Q 011355          393 KPLMATRLASIVGSVIVG--TDMGYLFSP  419 (488)
Q Consensus       393 ~PVI~~~~~~~~~e~v~~--~~~g~l~~~  419 (488)
                      .+.+++--|... |+.++  +++|+.|..
T Consensus       651 ~lnlstlDGw~v-E~~~~vg~eN~f~fG~  678 (796)
T d1l5wa_         651 ALTVGTLDGANV-EIAEKVGEENIFIFGH  678 (796)
T ss_dssp             CEEEECSCTTHH-HHHHHHCGGGSEECSC
T ss_pred             CeeeecccchHH-HHHHhcCccceEEecC
Confidence            999999888877 66543  789998864

>d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: LmbE-like
superfamily: LmbE-like
family: LmbE-like
domain: Hypothetical protein TT1542
species: Thermus thermophilus [TaxId: 274]

Probab=92.57  E-value=0.55  Score=38.67  Aligned_cols=40  Identities=10%  Similarity=-0.036  Sum_probs=27.2

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASCLN  122 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  122 (488)
                      |||++|+.+      ..-.+..+--.+..+.++|++|.+++.+.+.
T Consensus         2 ~~VLvi~aH------PDDe~lg~GGtiak~~~~G~~V~vv~~T~G~   41 (227)
T d1uana_           2 LDLLVVAPH------PDDGELGCGGTLARAKAEGLSTGILDLTRGE   41 (227)
T ss_dssp             EEEEEEESS------TTHHHHHHHHHHHHHHHTTCCEEEEEEECCT
T ss_pred             ceEEEEEeC------CChHHHHHHHHHHHHHHcCCeEEEEEEeCCC
Confidence            799999874      2333333344455577889999999887643

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.50  E-value=0.84  Score=32.83  Aligned_cols=81  Identities=19%  Similarity=0.153  Sum_probs=48.7

Q ss_pred             eEEEEEecCCCCCCCCCcHH--HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLE--RHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQ  154 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~--~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  154 (488)
                      -||+++.+. |.. ..-|.|  ....+.+++|++.|+++.++.+.+............+++....            +..
T Consensus         5 kkvlViGsG-p~r-IGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~lYfeplt------------~e~   70 (121)
T d1a9xa4           5 EKIMVLGGG-PNR-IGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVT------------LED   70 (121)
T ss_dssp             CEEEEECCC-SCB-TTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCCCS------------HHH
T ss_pred             CEEEEECCC-cCc-ccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCceEEccCC------------HHH
Confidence            388998753 221 122333  4567889999999999999998875554443444444443322            222


Q ss_pred             HHHHhcCCCCCcEEEeCC
Q 011355          155 LQTQNSTGKPFDVIHTES  172 (488)
Q Consensus       155 ~~~~~~~~~~~Dvv~~~~  172 (488)
                      +......+ +||-|+..-
T Consensus        71 v~~Ii~~E-~p~~ii~~~   87 (121)
T d1a9xa4          71 VLEIVRIE-KPKGVIVQY   87 (121)
T ss_dssp             HHHHHHHH-CCSEEECSS
T ss_pred             HHHHHHHh-CCCEEEeeh
Confidence            23322222 899998764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.15  E-value=0.71  Score=33.65  Aligned_cols=84  Identities=10%  Similarity=0.067  Sum_probs=47.9

Q ss_pred             CceEEEEEecCCCCCCCCC-cHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHH
Q 011355           75 KLLKIALFVKKWPHRSHAG-GLERHALTLHLALAKRGHELHIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQ  153 (488)
Q Consensus        75 ~~mkIl~i~~~~p~~~~~g-G~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  153 (488)
                      ..-||+++.+. |..-..+ -......+.+++|++.|+++.++.+.+............+++....            +.
T Consensus         6 ~~kkvlilGsG-p~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~lYfePlt------------~e   72 (127)
T d1a9xa3           6 DIKSILILGAG-PIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIH------------WE   72 (127)
T ss_dssp             SCCEEEEECCC-SCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEECSCCC------------HH
T ss_pred             CCCEEEEECCC-cCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcceeeeecCC------------HH
Confidence            34589999753 2221222 2335677889999999999999988764433322233333333221            22


Q ss_pred             HHHHHhcCCCCCcEEEeCC
Q 011355          154 QLQTQNSTGKPFDVIHTES  172 (488)
Q Consensus       154 ~~~~~~~~~~~~Dvv~~~~  172 (488)
                      .+......+ +||.|+..-
T Consensus        73 ~v~~Ii~~E-~pd~il~~~   90 (127)
T d1a9xa3          73 VVRKIIEKE-RPDAVLPTM   90 (127)
T ss_dssp             HHHHHHHHH-CCSEEECSS
T ss_pred             HHHHHHHHh-CcCCeEEEe
Confidence            223333222 899988753

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.08  E-value=0.84  Score=36.71  Aligned_cols=32  Identities=25%  Similarity=0.245  Sum_probs=24.6

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTAS  119 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  119 (488)
                      |||+++..           ..+.....+.|.+.||+|..+...
T Consensus         1 MkI~~~G~-----------~~~~~~~l~~L~~~~~~i~~V~t~   32 (203)
T d2bw0a2           1 MKIAVIGQ-----------SLFGQEVYCHLRKEGHEVVGVFTV   32 (203)
T ss_dssp             CEEEEECC-----------HHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEEcC-----------CHHHHHHHHHHHHCCCcEEEEEcC
Confidence            89999964           345567888999999999865544

>d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: DsrEFH-like
superfamily: DsrEFH-like
family: DsrEF-like
domain: Sulfurtransferase DsrE
species: Chromatium vinosum [TaxId: 1049]

Probab=89.59  E-value=1.2  Score=32.78  Aligned_cols=79  Identities=19%  Similarity=0.230  Sum_probs=47.7

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeE-EEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHEL-HIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQL  155 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      ||++++...-|.   .+-..+.++.+++++.+.||+| .|+...+.-.......         .+ .....+....|..+
T Consensus         1 Mk~~i~v~~~P~---~~~~a~~al~fA~aal~~gh~V~~vFf~~dGV~~a~~~~---------~~-~~~~~~~~~~~~~l   67 (130)
T d2hy5a1           1 MKFALQINEGPY---QHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNSTRLT---------TP-PQDDRHIVNRWAEL   67 (130)
T ss_dssp             CEEEEEECSCTT---TSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGBSCC---------CC-CTTSCCHHHHHHHH
T ss_pred             CEEEEEEcCCCC---CcHHHHHHHHHHHHHHHCCCeEEEEEEecchhhhhhccc---------cc-ccccCCHHHHHHHH
Confidence            898888865332   3445667889999999999999 5886654221111000         00 01224556667766


Q ss_pred             HHHhcCCCCCcEEEeCC
Q 011355          156 QTQNSTGKPFDVIHTES  172 (488)
Q Consensus       156 ~~~~~~~~~~Dvv~~~~  172 (488)
                      ....    ..+++.|..
T Consensus        68 ~~~~----g~~l~vC~~   80 (130)
T d2hy5a1          68 AEQY----ELDMVVCVA   80 (130)
T ss_dssp             HHHH----TCCEEEEHH
T ss_pred             HHhc----CCEEEEeHH
Confidence            5554    678877753

>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DsrEFH-like
superfamily: DsrEFH-like
family: DsrEF-like
domain: tRNA 2-thiouridine synthesizing protein D, TusD
species: Escherichia coli [TaxId: 562]

Probab=87.95  E-value=0.54  Score=34.64  Aligned_cols=79  Identities=22%  Similarity=0.219  Sum_probs=47.1

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeE-EEEecCCCCCCCCCCCCceEEEecCCCCccCcchhHHHHHHH
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHEL-HIFTASCLNCSFPTYPISSLYFHLSKPTAAGYLDQSIVWQQL  155 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  155 (488)
                      ||++++...-|   ..+.....++.+++++.++||+| .||...+.-.......          .......+....|..+
T Consensus         1 Mk~~i~v~~~P---~~~~~a~~A~~fA~aal~~Gh~V~~vF~~~dGV~~a~~~~----------~~~~~~~~~~~~~~~l   67 (128)
T d2d1pa1           1 MRFAIVVTGPA---YGTQQASSAFQFAQALIADGHELSSVFFYREGVYNANQLT----------SPASDEFDLVRAWQQL   67 (128)
T ss_dssp             CEEEEEECSCS---SSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGBTTC----------CCCTTSCCHHHHHHHH
T ss_pred             CEEEEEEecCC---CCcHHHHHHHHHHHHHHhCCCceeEEEEechHHHHhhccc----------CcccCcccHHHHHHHH
Confidence            88888876533   23445667789999999999999 4887765321111000          0001223455566666


Q ss_pred             HHHhcCCCCCcEEEeCC
Q 011355          156 QTQNSTGKPFDVIHTES  172 (488)
Q Consensus       156 ~~~~~~~~~~Dvv~~~~  172 (488)
                      ....    +..++.|..
T Consensus        68 ~~~~----gv~l~vC~~   80 (128)
T d2d1pa1          68 NAQH----GVALNICVA   80 (128)
T ss_dssp             HHHH----CCEEEEEHH
T ss_pred             HHhc----CCeEEEeHH
Confidence            5544    678877753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.39  E-value=0.41  Score=38.16  Aligned_cols=33  Identities=33%  Similarity=0.521  Sum_probs=26.5

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTAS  119 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  119 (488)
                      |||+++..       .||..+   .+++.|++.||+|.+...+
T Consensus         1 Mki~vigG-------aG~iG~---alA~~la~~G~~V~l~~R~   33 (212)
T d1jaya_           1 MRVALLGG-------TGNLGK---GLALRLATLGHEIVVGSRR   33 (212)
T ss_dssp             CEEEEETT-------TSHHHH---HHHHHHHTTTCEEEEEESS
T ss_pred             CEEEEEeC-------CcHHHH---HHHHHHHHCCCEEEEEECC
Confidence            89998852       366555   7999999999999999764

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.26  E-value=1.5  Score=35.03  Aligned_cols=32  Identities=19%  Similarity=0.133  Sum_probs=23.2

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTAS  119 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  119 (488)
                      |||+++..           ........++|.+.||+|..+...
T Consensus         1 Mkiv~~~~-----------~~~g~~~l~~L~~~g~~I~~Vvt~   32 (203)
T d2blna2           1 MKTVVFAY-----------HDMGCLGIEALLAAGYEISAIFTH   32 (203)
T ss_dssp             CEEEEEEC-----------HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CeEEEEec-----------CHHHHHHHHHHHHCCCCEEEEEcC
Confidence            89999975           123346788888999999765543

>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: WrbA-like
domain: Trp repressor binding protein WrbA
species: Deinococcus radiodurans [TaxId: 1299]

Probab=84.57  E-value=0.95  Score=36.26  Aligned_cols=40  Identities=18%  Similarity=0.100  Sum_probs=32.7

Q ss_pred             ceEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 011355           76 LLKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC  120 (488)
Q Consensus        76 ~mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  120 (488)
                      +|||++|..+     ..|-.+..+..+++.+.+.|+||.++...+
T Consensus         2 ~mkilivy~S-----~~GnT~~la~~ia~g~~~~G~ev~~~~~~~   41 (201)
T d1ydga_           2 PVKLAIVFYS-----STGTGYAMAQEAAEAGRAAGAEVRLLKVRE   41 (201)
T ss_dssp             CCEEEEEECC-----SSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CcEEEEEEeC-----CCcHHHHHHHHHHHHHHhcCCEEEEEEccc
Confidence            6999999752     456677778888999999999999997764

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=83.92  E-value=0.67  Score=35.72  Aligned_cols=33  Identities=30%  Similarity=0.393  Sum_probs=26.3

Q ss_pred             eEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCC
Q 011355           77 LKIALFVKKWPHRSHAGGLERHALTLHLALAKRGHELHIFTASC  120 (488)
Q Consensus        77 mkIl~i~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  120 (488)
                      |||+|+..        |.+..   .++..|.+.||+|+++....
T Consensus         1 MkI~IiGa--------G~iG~---~~a~~L~~~G~~V~~~~r~~   33 (167)
T d1ks9a2           1 MKITVLGC--------GALGQ---LWLTALCKQGHEVQGWLRVP   33 (167)
T ss_dssp             CEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSSC
T ss_pred             CEEEEECc--------CHHHH---HHHHHHHHCCCceEEEEcCH
Confidence            89999974        44444   47888999999999998764