Citrus Sinensis ID: 011357

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
MWIEALDLMLQKLSKSLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLGRR
cHHHHHHHHHHHHHcccccccEEEEEEcccccccEEEccccccccccccccccHHHHccccccccccccccccccHHHHHHHHHHHccHHHHHHHHccccccccHHHHHHHHHHHcccHHHHcccEEccHHHHHHHHHcccccccHHHHHcccccccccccccHHHHHHHccccHHccccccccccccccccHHHHHHHccccccEEEEcccHHHHHHHcccccccccEEEEEccccEEEEEcccccccccccEEccccccccEEEHHHHccHHHHHHHHHHHHccccHHHHHHHHHcccccccccEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
cHHHHHHHHHHHHHccccHHHEEEEEEcccccEEEEEEcccccEEccccccccHHHHHcccccEEEEEEEEcccHHHHHHHHHHHccHHHHHHHHcccEEcccccHHHHHHHHcccHHHHHHHHHcccccHEHHEHccccEEEEccccccHHEEEEcccccccHHHHHHHcccHHHHccccccccEEEEcccHHHHccccccccEEEEEccccHHHHHHHHHcccccccccccccccEEEEcccccccccccccEccccccEEEHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcccccccEEEEEEEccccccccccccEEEEEccHcccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccHHHHHHHHHHHHHHHccccEccccHHHHHHHHHHHHHHHHcccccHHHHHHHHcHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
MWIEALDLMLQKLSksldlskvtavsgsgqqhgsvywkkgsatilssldpkkplvdqlgdafstkespvwmdsstTAQCREIEKAVGGALelskltgsrgyerftgpqirklfqtqpgvyddterISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSleeklgklapahavagCIAPYFVERFHFNKNCLVVQwsgdnpnslagltlstsgdlaislgtsdtvfgitddpeprleghvfpnpvdtkGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYlqqtpplnggkmgfyykeheilpplpvgfHRYILenfegetldgvnevevkefdppsevRALVEGQFLsmrghaerfglpspprriiatggasaNQTILSCLASiygcdiytvqrpdsaSLGAALRAAHGYlcskkgsfvpisnmykdklektSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLGRR
MWIEALDLMLQKLSKSLDLSKVTAvsgsgqqhgsvyWKKGSATILSSLDPKKPLVDQLGDAfstkespvwmdSSTTAQCREIEKAVGGAlelskltgsrgyerftgpqirklfqtqpgvydDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITddpeprleghvfpnpvdtkgyMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLavtagdqqlVSKYAVMMKKRLEIEnrlveklgrr
MWIEAldlmlqklsksldlskVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLGRR
*****LDLML***********************SVYWKKGSATIL********************************QCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEF*****VRALVEGQFLSMRGHA*RFG*****RRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEI***********
MWIEALDLMLQKLSKSLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEK****
MWIEALDLMLQKLSKSLDLS************GSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLGRR
MWIEALDLMLQKLSKSLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLG**
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MWIEALDLMLQKLSKSLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLGRR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query488 2.2.26 [Sep-21-2011]
Q3SYZ6490 Xylulose kinase OS=Bos ta yes no 0.844 0.840 0.508 1e-120
Q3TNA1551 Xylulose kinase OS=Mus mu yes no 0.948 0.840 0.476 1e-120
Q5R830580 Xylulose kinase OS=Pongo yes no 0.872 0.734 0.502 1e-120
O75191536 Xylulose kinase OS=Homo s yes no 0.942 0.858 0.471 1e-118
Q3MIF4536 Xylulose kinase OS=Rattus yes no 0.942 0.858 0.477 1e-116
P30646522 Uncharacterized sugar kin yes no 0.885 0.827 0.403 4e-91
Q9C0U6555 Xylulose kinase OS=Schizo yes no 0.905 0.796 0.379 1e-79
Q4WUV8573 Probable D-xylulose kinas yes no 0.854 0.727 0.390 3e-75
B0Y4D5573 Probable D-xylulose kinas N/A no 0.854 0.727 0.390 3e-75
A1DEK3573 Probable D-xylulose kinas N/A no 0.854 0.727 0.392 3e-75
>sp|Q3SYZ6|XYLB_BOVIN Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1 Back     alignment and function desciption
 Score =  433 bits (1114), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/427 (50%), Positives = 288/427 (67%), Gaps = 15/427 (3%)

Query: 1   MWIEALDLMLQKLSKS-LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLG 59
           MW++ALD++L+K+  S  D S+V A+SG+GQQHGSVYWK G++ +L+SL P  PL +QL 
Sbjct: 67  MWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSVYWKTGASQVLTSLSPDLPLREQLQ 126

Query: 60  DAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGV 119
             FS    PVWMDSST AQCR++E AVGGA  LS LTGSR YERFTG QI K++Q  P  
Sbjct: 127 ACFSISNCPVWMDSSTAAQCRQLEAAVGGAQALSLLTGSRAYERFTGNQIAKIYQQNPEA 186

Query: 120 YDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLG 179
           Y  TERIS+VSSF ASL +G+Y+ +D +D +GMNL+ I+ +VWS+  L A AP LEEKLG
Sbjct: 187 YSHTERISLVSSFAASLFLGSYSPVDYSDGSGMNLLQIQDKVWSQACLGACAPRLEEKLG 246

Query: 180 KLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTV 239
           +  P+ ++ G I+ YFV+R+ F   C VV ++GDNP SLAG+ L   GD+A+SLGTSDT+
Sbjct: 247 RPVPSCSIVGAISSYFVQRYGFPPECKVVAFTGDNPASLAGMRLE-EGDIAVSLGTSDTL 305

Query: 240 FGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQT 299
           F    +P P LEGH+F NPVD + YM +L +KN SL RE +R+  A  SW  F+K LQ T
Sbjct: 306 FLWLQEPTPALEGHIFCNPVDPQHYMALLCFKNGSLMREKIRDESASGSWSKFSKALQST 365

Query: 300 PPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVE 359
              N G +GFY+   EI P + +G HR+  EN            EV  F    E+RAL+E
Sbjct: 366 GMGNSGNLGFYFDVMEITPEI-IGRHRFTAENH-----------EVSAFPQDVEIRALIE 413

Query: 360 GQFLSMRGHAERFGLPSPPR-RIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGA 418
           GQF++ + HAE  G    P+ +I+ATGGAS N+ IL  LA ++G  +Y +   +SA +G+
Sbjct: 414 GQFMAKKIHAEALGYRVMPKTKILATGGASHNRDILQVLADVFGAPVYVIDTANSACVGS 473

Query: 419 ALRAAHG 425
           A RA HG
Sbjct: 474 AYRAFHG 480

Bos taurus (taxid: 9913)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 7
>sp|Q3TNA1|XYLB_MOUSE Xylulose kinase OS=Mus musculus GN=Xylb PE=2 SV=1 Back     alignment and function description
>sp|Q5R830|XYLB_PONAB Xylulose kinase OS=Pongo abelii GN=XYLB PE=2 SV=1 Back     alignment and function description
>sp|O75191|XYLB_HUMAN Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3 Back     alignment and function description
>sp|Q3MIF4|XYLB_RAT Xylulose kinase OS=Rattus norvegicus GN=Xylb PE=2 SV=1 Back     alignment and function description
>sp|P30646|YNE7_CAEEL Uncharacterized sugar kinase R08D7.7 OS=Caenorhabditis elegans GN=R08D7.7 PE=3 SV=4 Back     alignment and function description
>sp|Q9C0U6|XKS1_SCHPO Xylulose kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=xks1 PE=3 SV=1 Back     alignment and function description
>sp|Q4WUV8|XKS1_ASPFU Probable D-xylulose kinase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xkiA PE=2 SV=1 Back     alignment and function description
>sp|B0Y4D5|XKS1_ASPFC Probable D-xylulose kinase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=xkiA PE=2 SV=1 Back     alignment and function description
>sp|A1DEK3|XKS1_NEOFI Probable D-xylulose kinase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xkiA PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query488
225458968558 PREDICTED: xylulose kinase [Vitis vinife 0.997 0.872 0.809 0.0
449505675558 PREDICTED: xylulose kinase-like [Cucumis 0.997 0.872 0.807 0.0
449458025558 PREDICTED: xylulose kinase-like [Cucumis 0.997 0.872 0.807 0.0
255537892558 xylulose kinase, putative [Ricinus commu 0.997 0.872 0.782 0.0
356507959557 PREDICTED: xylulose kinase-like [Glycine 0.995 0.872 0.788 0.0
147845091554 hypothetical protein VITISV_026788 [Viti 0.987 0.870 0.787 0.0
357466769557 Xylulose kinase [Medicago truncatula] gi 0.995 0.872 0.770 0.0
15240526558 xylulose kinase-2 [Arabidopsis thaliana] 0.997 0.872 0.764 0.0
125559333562 hypothetical protein OsI_27048 [Oryza sa 0.997 0.866 0.751 0.0
115473645562 Os07g0640200 [Oryza sativa Japonica Grou 0.997 0.866 0.749 0.0
>gi|225458968|ref|XP_002285560.1| PREDICTED: xylulose kinase [Vitis vinifera] gi|302142128|emb|CBI19331.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/488 (80%), Positives = 448/488 (91%), Gaps = 1/488 (0%)

Query: 1   MWIEALDLMLQKLSKS-LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLG 59
           MW+EAL+L+LQKLSKS LD  K+ A+SGSGQQHGSVYWK GS+ ILSSLDP KPLV QLG
Sbjct: 70  MWVEALELVLQKLSKSKLDFGKIAAISGSGQQHGSVYWKSGSSAILSSLDPSKPLVGQLG 129

Query: 60  DAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGV 119
           DAFSTKESP+WMDSSTT QCREIE+AVGGALELS+LTGSR +ER+TGPQIRK+F   P +
Sbjct: 130 DAFSTKESPIWMDSSTTEQCREIEEAVGGALELSRLTGSRAHERYTGPQIRKIFLKLPEI 189

Query: 120 YDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLG 179
           Y+ TERIS+VSSFMASLLIG+YACIDETD AGMNLMDI+QR WSKI LEATAPSLEEKLG
Sbjct: 190 YNQTERISLVSSFMASLLIGSYACIDETDGAGMNLMDIKQRAWSKIALEATAPSLEEKLG 249

Query: 180 KLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTV 239
           KLAPAHAVAG IAPYFVERFHFNKNCL+VQWSGDNPNSLAGLTL+T GDLAISLGTSDTV
Sbjct: 250 KLAPAHAVAGFIAPYFVERFHFNKNCLIVQWSGDNPNSLAGLTLNTPGDLAISLGTSDTV 309

Query: 240 FGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQT 299
           FGIT +P+P LEGHVFPNPVDT+GYM+ML YKN SLTREDVRNRCA++SW+VFN++L++T
Sbjct: 310 FGITSNPQPSLEGHVFPNPVDTEGYMVMLCYKNGSLTREDVRNRCAKESWEVFNEFLEKT 369

Query: 300 PPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVE 359
           PPLNGGK+GFYYK+HEILPPLPVGFHRY+L+ F GE LDG+NE EV+EFDP SEVRA++E
Sbjct: 370 PPLNGGKIGFYYKDHEILPPLPVGFHRYVLQGFTGENLDGINECEVEEFDPSSEVRAVIE 429

Query: 360 GQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAA 419
           GQFLSMRGHAERFG+PSPP+RIIATGGASAN +IL  +ASI+GCD+YTVQRPDSASLGAA
Sbjct: 430 GQFLSMRGHAERFGMPSPPKRIIATGGASANHSILKSIASIFGCDVYTVQRPDSASLGAA 489

Query: 420 LRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIEN 479
           LRAAHG+LC+ +G FVP S +YKDKLEKTSLSCKLAVTAGD+ LVSKY ++MKKR+EIE 
Sbjct: 490 LRAAHGWLCNTRGKFVPTSCLYKDKLEKTSLSCKLAVTAGDKPLVSKYGLLMKKRMEIEK 549

Query: 480 RLVEKLGR 487
            LV+KLGR
Sbjct: 550 HLVQKLGR 557

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449505675|ref|XP_004162538.1| PREDICTED: xylulose kinase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449458025|ref|XP_004146748.1| PREDICTED: xylulose kinase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255537892|ref|XP_002510011.1| xylulose kinase, putative [Ricinus communis] gi|223550712|gb|EEF52198.1| xylulose kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356507959|ref|XP_003522730.1| PREDICTED: xylulose kinase-like [Glycine max] Back     alignment and taxonomy information
>gi|147845091|emb|CAN78470.1| hypothetical protein VITISV_026788 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357466769|ref|XP_003603669.1| Xylulose kinase [Medicago truncatula] gi|355492717|gb|AES73920.1| Xylulose kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15240526|ref|NP_199776.1| xylulose kinase-2 [Arabidopsis thaliana] gi|15292819|gb|AAK92778.1| putative xylulose kinase [Arabidopsis thaliana] gi|23296764|gb|AAN13165.1| putative xylulose kinase [Arabidopsis thaliana] gi|332008458|gb|AED95841.1| xylulose kinase-2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|125559333|gb|EAZ04869.1| hypothetical protein OsI_27048 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|115473645|ref|NP_001060421.1| Os07g0640200 [Oryza sativa Japonica Group] gi|23237892|dbj|BAC16466.1| putative xylulose kinase [Oryza sativa Japonica Group] gi|50510169|dbj|BAD31264.1| putative xylulose kinase [Oryza sativa Japonica Group] gi|113611957|dbj|BAF22335.1| Os07g0640200 [Oryza sativa Japonica Group] gi|125601254|gb|EAZ40830.1| hypothetical protein OsJ_25306 [Oryza sativa Japonica Group] gi|215687238|dbj|BAG91803.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query488
TAIR|locus:2168902558 XK-2 "AT5G49650" [Arabidopsis 0.995 0.870 0.747 2.9e-197
UNIPROTKB|F1PI40536 XYLB "Uncharacterized protein" 0.872 0.794 0.488 2.5e-104
UNIPROTKB|Q3SYZ6490 XYLB "Xylulose kinase" [Bos ta 0.850 0.846 0.490 6.7e-104
ZFIN|ZDB-GENE-040426-1373528 xylb "xylulokinase homolog (H. 0.862 0.797 0.483 8.6e-104
MGI|MGI:2142985551 Xylb "xylulokinase homolog (H. 0.954 0.845 0.462 2.3e-103
UNIPROTKB|O75191536 XYLB "Xylulose kinase" [Homo s 0.872 0.794 0.486 2.6e-102
UNIPROTKB|F1RRB3551 XYLB "Uncharacterized protein" 0.932 0.825 0.459 2.6e-102
RGD|1307372536 Xylb "xylulokinase homolog (H. 0.844 0.768 0.491 5.4e-102
UNIPROTKB|F1NCC1428 XYLB "Uncharacterized protein" 0.737 0.841 0.497 8.1e-92
UNIPROTKB|B4DDT2399 XYLB "Xylulose kinase" [Homo s 0.729 0.892 0.498 7.7e-87
TAIR|locus:2168902 XK-2 "AT5G49650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1910 (677.4 bits), Expect = 2.9e-197, P = 2.9e-197
 Identities = 364/487 (74%), Positives = 410/487 (84%)

Query:     1 MWIEAXXXXXXXXXXXXXXXX-VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLG 59
             MW+EA                 V AVSGSGQQHGSVYW KGS+ +L SLD K+ L +QL 
Sbjct:    70 MWVEAFDLILQKLSNANFDFAKVIAVSGSGQQHGSVYWSKGSSEVLRSLDSKRSLKEQLE 129

Query:    60 DAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGV 119
             +AFS KESP+WMDSSTT QC+EIE AVGGA+ELSK+TGSR YERFTGPQIRKLF TQ  V
Sbjct:   130 NAFSVKESPIWMDSSTTLQCKEIENAVGGAMELSKITGSRAYERFTGPQIRKLFMTQGEV 189

Query:   120 YDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLG 179
             Y  TERIS+VSSFMASLL+G YACIDETDAAGMNLMDI +R WSK  LEATA  LEEKLG
Sbjct:   190 YKSTERISLVSSFMASLLVGDYACIDETDAAGMNLMDIEKRCWSKAALEATATGLEEKLG 249

Query:   180 KLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTV 239
             KLAPA+A AG I+ YFV+RF F KNC+VVQWSGDNPNSLAGLTLST GDLAISLGTSDTV
Sbjct:   250 KLAPAYATAGSISQYFVQRFGFEKNCVVVQWSGDNPNSLAGLTLSTPGDLAISLGTSDTV 309

Query:   240 FGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQT 299
             FGIT + +P LEGHV PNPVD + YM+MLVYKNASLTRE++R+RCAE SWDVFNKYLQQT
Sbjct:   310 FGITKELQPSLEGHVLPNPVDPESYMVMLVYKNASLTREEIRDRCAEGSWDVFNKYLQQT 369

Query:   300 PPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVE 359
              PLN GK+GFYY E+EILPPLPVG HRYILENF GE+L+GV E EV EFDPPSEVRAL+E
Sbjct:   370 QPLNNGKLGFYYTENEILPPLPVGSHRYILENFSGESLEGVKEQEVGEFDPPSEVRALIE 429

Query:   360 GQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAA 419
             GQFLS R H ERFG+PSPP RIIATGGASAN+ ILS +++I+GCD+YTVQRPDSASLGAA
Sbjct:   430 GQFLSKRAHTERFGMPSPPLRIIATGGASANENILSLISAIFGCDVYTVQRPDSASLGAA 489

Query:   420 LRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIEN 479
             LRAAHG+LC+KKGSFVPISN+Y+ KLE TSL+CKL V AGD  + S Y ++MKKR+EIEN
Sbjct:   490 LRAAHGWLCNKKGSFVPISNLYEGKLETTSLNCKLKVKAGDANIASTYGLLMKKRMEIEN 549

Query:   480 RLVEKLG 486
             +LVEKLG
Sbjct:   550 KLVEKLG 556
GO:0004856 "xylulokinase activity" evidence=ISS;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0005829 "cytosol" evidence=IDA
GO:0005997 "xylulose metabolic process" evidence=IMP
UNIPROTKB|F1PI40 XYLB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SYZ6 XYLB "Xylulose kinase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1373 xylb "xylulokinase homolog (H. influenzae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2142985 Xylb "xylulokinase homolog (H. influenzae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O75191 XYLB "Xylulose kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RRB3 XYLB "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1307372 Xylb "xylulokinase homolog (H. influenzae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NCC1 XYLB "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|B4DDT2 XYLB "Xylulose kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5ASE0XKS1_EMENI2, ., 7, ., 1, ., 1, 70.34350.97950.8227yesno
Q3MIF4XYLB_RAT2, ., 7, ., 1, ., 1, 70.47740.94260.8582yesno
Q3TNA1XYLB_MOUSE2, ., 7, ., 1, ., 1, 70.47650.94870.8402yesno
P30646YNE7_CAEEL2, ., 7, ., 1, ., -0.40350.88520.8275yesno
O75191XYLB_HUMAN2, ., 7, ., 1, ., 1, 70.47130.94260.8582yesno
Q3SYZ6XYLB_BOVIN2, ., 7, ., 1, ., 1, 70.50810.84420.8408yesno
Q5R830XYLB_PONAB2, ., 7, ., 1, ., 1, 70.50220.87290.7344yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.10.921
4th Layer2.7.1.170.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query488
PLN02669556 PLN02669, PLN02669, xylulokinase 0.0
cd07776480 cd07776, FGGY_D-XK_euk, eukaryotic D-xylulose kina 0.0
cd00366435 cd00366, FGGY, FGGY family of carbohydrate kinases 6e-63
COG1070502 COG1070, XylB, Sugar (pentulose and hexulose) kina 6e-51
cd07809487 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 2e-41
TIGR01312481 TIGR01312, XylB, D-xylulose kinase 5e-37
pfam02782193 pfam02782, FGGY_C, FGGY family of carbohydrate kin 8e-30
cd07808482 cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xyl 4e-27
cd07803482 cd07803, FGGY_D-XK, D-xylulose kinases; a subgroup 1e-26
pfam00370245 pfam00370, FGGY_N, FGGY family of carbohydrate kin 8e-21
cd07774430 cd07774, FGGY_1, uncharacterized subgroup; belongs 5e-17
cd07804492 cd07804, FGGY_XK_like_1, uncharacterized xylulose 5e-13
PRK15027484 PRK15027, PRK15027, xylulokinase; Provisional 2e-12
cd07770440 cd07770, FGGY_GntK, Gluconate kinases; a subfamily 2e-12
cd07805514 cd07805, FGGY_XK_like_2, uncharacterized xylulose 3e-11
cd07802447 cd07802, FGGY_L-XK, L-xylulose kinases; a subfamil 4e-10
cd07810490 cd07810, FGGY_D-XK_2, D-xylulose kinases, subgroup 1e-08
cd07777448 cd07777, FGGY_SHK_like, sedoheptulokinase-like pro 1e-06
TIGR01314505 TIGR01314, gntK_FGGY, gluconate kinase, FGGY type 3e-06
cd07804492 cd07804, FGGY_XK_like_1, uncharacterized xylulose 5e-06
cd07808482 cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xyl 2e-05
cd07779488 cd07779, FGGY_ygcE_like, uncharacterized ygcE-like 2e-05
PLN02295512 PLN02295, PLN02295, glycerol kinase 2e-05
cd07768465 cd07768, FGGY_RBK_like, Ribulokinase-like carbohyd 3e-05
cd07789495 cd07789, FGGY_CsGK_like, Cellulomonas sp 5e-05
cd07775452 cd07775, FGGY_AI-2K, Autoinducer-2 kinases; a subf 2e-04
TIGR01311493 TIGR01311, glycerol_kin, glycerol kinase 0.002
PTZ00294504 PTZ00294, PTZ00294, glycerol kinase-like protein; 0.002
PRK07337 388 PRK07337, PRK07337, aminotransferase; Validated 0.003
>gnl|CDD|178274 PLN02669, PLN02669, xylulokinase Back     alignment and domain information 
 Score =  971 bits (2512), Expect = 0.0
 Identities = 385/488 (78%), Positives = 434/488 (88%), Gaps = 1/488 (0%)

Query: 1   MWIEALDLMLQKLSKS-LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLG 59
           MW+EALDL+LQKL+K      KV A+SGSGQQHGSVYW+KG++ +L SLDP K LV QL 
Sbjct: 68  MWVEALDLLLQKLAKEKFPFHKVVAISGSGQQHGSVYWRKGASAVLKSLDPSKSLVAQLQ 127

Query: 60  DAFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGV 119
           DAFSTK+SP+WMDSSTT QCREIE+AVGGA ELSKLTGSR YERFTGPQIRK+++TQP V
Sbjct: 128 DAFSTKDSPIWMDSSTTKQCREIEEAVGGAAELSKLTGSRAYERFTGPQIRKIYETQPEV 187

Query: 120 YDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLG 179
           Y DTERIS+VSSFMASLL+G YA IDETD AGMNLMDI +R WSK  LEATAP LEEKLG
Sbjct: 188 YHDTERISLVSSFMASLLVGDYASIDETDGAGMNLMDIEKRCWSKAALEATAPGLEEKLG 247

Query: 180 KLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTV 239
           KLAPAHAVAG I PYFV+RF F+ NCLVVQWSGDNPNSLAGLTLST GDLAISLGTSDTV
Sbjct: 248 KLAPAHAVAGKIHPYFVQRFGFSSNCLVVQWSGDNPNSLAGLTLSTPGDLAISLGTSDTV 307

Query: 240 FGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQT 299
           FGIT +P+P LEGHVFPNPVD + YM+ML YKN SLTRED+RNRCA+ SWDVFNK L+QT
Sbjct: 308 FGITREPQPSLEGHVFPNPVDPESYMVMLCYKNGSLTREDIRNRCADGSWDVFNKLLEQT 367

Query: 300 PPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVE 359
           PPLNGGK+GFYYKEHEILPPLPVGFHRYILENF GE LDG+ E EV EFDPPSEVRA++E
Sbjct: 368 PPLNGGKLGFYYKEHEILPPLPVGFHRYILENFSGEALDGLVEEEVGEFDPPSEVRAIIE 427

Query: 360 GQFLSMRGHAERFGLPSPPRRIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAA 419
           GQFLSMR HAERFG+P PP+RIIATGGASANQ+IL  +ASI+GCD+YTVQRPDSASLGAA
Sbjct: 428 GQFLSMRAHAERFGMPVPPKRIIATGGASANQSILKLIASIFGCDVYTVQRPDSASLGAA 487

Query: 420 LRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIEN 479
           LRAAHG+LC+++GSFVPIS +Y+ KLE TSLSCKLAV AGDQ+L+S+Y ++MKKR+EIE 
Sbjct: 488 LRAAHGWLCNEQGSFVPISCLYEGKLEATSLSCKLAVKAGDQELLSQYGLLMKKRMEIEQ 547

Query: 480 RLVEKLGR 487
           +LVEKLGR
Sbjct: 548 QLVEKLGR 555

Length = 556
>gnl|CDD|212660 cd07776, FGGY_D-XK_euk, eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|212658 cd00366, FGGY, FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|223996 COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|198375 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|233354 TIGR01312, XylB, D-xylulose kinase Back     alignment and domain information
>gnl|CDD|217229 pfam02782, FGGY_C, FGGY family of carbohydrate kinases, C-terminal domain Back     alignment and domain information
>gnl|CDD|198374 cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|198371 cd07803, FGGY_D-XK, D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|215880 pfam00370, FGGY_N, FGGY family of carbohydrate kinases, N-terminal domain Back     alignment and domain information
>gnl|CDD|198352 cd07774, FGGY_1, uncharacterized subgroup; belongs to the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|198372 cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|184987 PRK15027, PRK15027, xylulokinase; Provisional Back     alignment and domain information
>gnl|CDD|212659 cd07770, FGGY_GntK, Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|198373 cd07805, FGGY_XK_like_2, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|212666 cd07802, FGGY_L-XK, L-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|198376 cd07810, FGGY_D-XK_2, D-xylulose kinases, subgroup 2; members of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|212661 cd07777, FGGY_SHK_like, sedoheptulokinase-like proteins; a subfamily of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|130381 TIGR01314, gntK_FGGY, gluconate kinase, FGGY type Back     alignment and domain information
>gnl|CDD|198372 cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|198374 cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|212662 cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins Back     alignment and domain information
>gnl|CDD|215166 PLN02295, PLN02295, glycerol kinase Back     alignment and domain information
>gnl|CDD|198346 cd07768, FGGY_RBK_like, Ribulokinase-like carbohydrate kinases; a subfamily of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|198362 cd07789, FGGY_CsGK_like, Cellulomonas sp Back     alignment and domain information
>gnl|CDD|198353 cd07775, FGGY_AI-2K, Autoinducer-2 kinases; a subfamily of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|233353 TIGR01311, glycerol_kin, glycerol kinase Back     alignment and domain information
>gnl|CDD|240348 PTZ00294, PTZ00294, glycerol kinase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 488
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 100.0
PRK15027484 xylulokinase; Provisional 100.0
PLN02669556 xylulokinase 100.0
PRK00047498 glpK glycerol kinase; Provisional 100.0
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 100.0
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 100.0
PTZ00294504 glycerol kinase-like protein; Provisional 100.0
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 100.0
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 100.0
PRK04123548 ribulokinase; Provisional 100.0
PRK10331470 L-fuculokinase; Provisional 100.0
PLN02295512 glycerol kinase 100.0
TIGR01311493 glycerol_kin glycerol kinase. This model describes 100.0
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 100.0
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 100.0
PRK10640471 rhaB rhamnulokinase; Provisional 100.0
COG0554499 GlpK Glycerol kinase [Energy production and conver 100.0
COG1069544 AraB Ribulose kinase [Energy production and conver 100.0
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 100.0
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 100.0
KOG2517516 consensus Ribulose kinase and related carbohydrate 100.0
PF00370245 FGGY_N: FGGY family of carbohydrate kinases, N-ter 100.0
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 99.97
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 98.54
PRK13317277 pantothenate kinase; Provisional 97.7
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 97.67
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 97.62
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 97.45
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 97.38
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 97.12
PRK13410 668 molecular chaperone DnaK; Provisional 96.95
CHL00094 621 dnaK heat shock protein 70 96.83
PTZ00186 657 heat shock 70 kDa precursor protein; Provisional 96.68
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 96.6
PRK15080267 ethanolamine utilization protein EutJ; Provisional 96.57
PRK00290 627 dnaK molecular chaperone DnaK; Provisional 96.36
PRK05183 616 hscA chaperone protein HscA; Provisional 96.34
TIGR01991 599 HscA Fe-S protein assembly chaperone HscA. The Hea 96.16
PRK13928336 rod shape-determining protein Mbl; Provisional 96.12
TIGR02350 595 prok_dnaK chaperone protein DnaK. Members of this 96.11
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 96.06
PF00012 602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 96.04
PRK01433 595 hscA chaperone protein HscA; Provisional 96.03
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 96.0
PLN03184 673 chloroplast Hsp70; Provisional 95.81
PTZ00400 663 DnaK-type molecular chaperone; Provisional 95.64
PTZ00009 653 heat shock 70 kDa protein; Provisional 95.64
PRK09585365 anmK anhydro-N-acetylmuramic acid kinase; Reviewed 95.63
PRK13411 653 molecular chaperone DnaK; Provisional 95.31
PRK13927334 rod shape-determining protein MreB; Provisional 95.19
PRK11678450 putative chaperone; Provisional 95.07
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 95.07
PRK13930335 rod shape-determining protein MreB; Provisional 95.03
PRK13929335 rod-share determining protein MreBH; Provisional 94.48
KOG0103 727 consensus Molecular chaperones HSP105/HSP110/SSE1, 94.3
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 93.77
PLN02920398 pantothenate kinase 1 93.74
COG0533342 QRI7 Metal-dependent proteases with possible chape 93.66
COG2377371 Predicted molecular chaperone distantly related to 93.64
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 93.49
PRK09472420 ftsA cell division protein FtsA; Reviewed 92.07
PRK14878323 UGMP family protein; Provisional 92.07
PRK09604332 UGMP family protein; Validated 92.03
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 92.03
COG0443 579 DnaK Molecular chaperone [Posttranslational modifi 91.89
TIGR00143711 hypF [NiFe] hydrogenase maturation protein HypF. A 91.11
PTZ00340345 O-sialoglycoprotein endopeptidase-like protein; Pr 91.05
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 90.27
KOG0100 663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 90.25
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 89.03
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 88.28
TIGR03723314 bact_gcp putative glycoprotease GCP. This model re 88.04
TIGR03722322 arch_KAE1 universal archaeal protein Kae1. This fa 86.85
KOG0101 620 consensus Molecular chaperones HSP70/HSC70, HSP70 86.74
PF02543360 CmcH_NodU: Carbamoyltransferase; InterPro: IPR0036 85.92
COG2192 555 Predicted carbamoyl transferase, NodU family [Post 85.91
TIGR00329305 gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami 85.76
PRK00976326 hypothetical protein; Provisional 85.2
PLN02902 876 pantothenate kinase 85.04
PRK09605 535 bifunctional UGMP family protein/serine/threonine 84.68
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 84.63
PF03630341 Fumble: Fumble ; InterPro: IPR004567 Pantothenate 84.34
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information 
Probab=100.00  E-value=3.9e-87  Score=713.57  Aligned_cols=433  Identities=18%  Similarity=0.258  Sum_probs=395.5

Q ss_pred             CHHHHHHHHHHHHhhc--CCCCCeeEEEEcccccceeeecCCCccccccCCCCCcccccccccCCCCCCccccCCCcHHH
Q 011357            1 MWIEALDLMLQKLSKS--LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQ   78 (488)
Q Consensus         1 ~ww~a~~~~~~~l~~~--~~~~~I~aIgis~~~~~~v~~d~~G~p~~~~~d~~~pl~~~~~~~~~~~~~i~W~D~Ra~~~   78 (488)
                      .||++++.+++++.++  .+ ++|.+||||+||+++++||++|+|          |          +|+|+|+|+|+.++
T Consensus        47 ~~~~~~~~~i~~~~~~~~~~-~~I~~Igis~~~~~~v~~D~~g~p----------l----------~~~i~w~D~R~~~~  105 (505)
T TIGR01314        47 EIFEAVLVTIREVSINLEDE-DEILFVSFSTQMHSLIAFDENWQP----------L----------TRLITWADNRAVKY  105 (505)
T ss_pred             HHHHHHHHHHHHHHHhCCCc-CceEEEEEecccceeEEECCCcCC----------c----------ccceeccccchHHH
Confidence            3899999999998765  33 679999999999999999999996          7          89999999999999


Q ss_pred             HHHHHHHhCCHHHHHHHhCCCCCCCChHHHHHHHhhhCCchhhhccccccchhhHHHHHhCCccccccchhccccccccC
Q 011357           79 CREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIR  158 (488)
Q Consensus        79 ~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~  158 (488)
                      ++++.+.++ .++++++||+++++.++++||+|+++|+|++|+++++|++++|||.|+|||+.+ +|+|+||+|++||++
T Consensus       106 ~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~  183 (505)
T TIGR01314       106 AEQIKESKN-GFDIYRRTGTPIHPMAPLSKIIWLEAEHPDIYQKAAKYLEIKGYIFQRLFGTYK-IDYSTASATGMFNLF  183 (505)
T ss_pred             HHHHHhhcC-HHHHHHHHCCCCCccchHHHHHHHHHhChhHHHhhcEEECHHHHHHHHHcCCce-eEhhhhhhhcceeCC
Confidence            999998764 477999999999999999999999999999999999999999999999999988 999999999999999


Q ss_pred             CCCccHHHHHHcC-cchHhhcCCcccCCcccccccHHHHHHcCCCCCCeEEeccChhHHhhhccCCCCCCcEEEEecccc
Q 011357          159 QRVWSKIVLEATA-PSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSD  237 (488)
Q Consensus       159 ~~~W~~~ll~~~g-~~~~~~LP~i~~~~~~~G~v~~~~A~~~GL~~g~pV~~g~~D~~aa~lg~g~~~~g~~~~s~GTs~  237 (488)
                      +++|++++++.+| +  .++||+|+++++++|+|++++|+++||++||||++|++|++|+++|+|+.++|++++++|||+
T Consensus       184 ~~~W~~ell~~~gi~--~~~lP~l~~~g~~iG~l~~~~a~~~GL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~  261 (505)
T TIGR01314       184 ELDWDKEALELTGIK--ESQLPKLVPTTEIEENLPHEYAKKMGIQSSTPFVIGASDGVLSNLGVNAIKKGEAAVTIGTSG  261 (505)
T ss_pred             CCCCCHHHHHhcCCC--HHHCCCCcCcccccCCcCHHHHHHhCCCCCCeEEEeccHHHHHHhcCCCCCCCcEEEEechhh
Confidence            9999999999999 7  789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCccccccCccCCCcEEEeeeeechhhHHHHHHHHhcC-----------ccHHHHHHHHhcCCCCCCCe
Q 011357          238 TVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAE-----------KSWDVFNKYLQQTPPLNGGK  306 (488)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~w~~~~~~~-----------~~~~~l~~~a~~~~~g~~gl  306 (488)
                      ++.+++++|..++....+++.+.++.|+.++.++++|.+++|+++.+..           ..|+.|+++++++|||++|+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~W~~~~~~~~~~~~~~~~~~~~y~~l~~~a~~~~~g~~gl  341 (505)
T TIGR01314       262 AIRTVIDKPKTDEKGRIFCYALTKEHWVIGGPVNNGGDVLRWARDEIFDSEIETATRLGIDPYDVLTEIAARVSPGADGL  341 (505)
T ss_pred             eeeeccCcCccCCCCceEEEEecCCcEEEEeeecchHhHHHHHHHHhhhhhhhhhhhcCCCHHHHHHHHHhhCCCCCCce
Confidence            9998888877665554456544457899999999999999999987631           35899999999999999999


Q ss_pred             EeEeccCCCCCCC---CCCcce-eeeecccccccccCcccccccCCChHHHHHHHHHHHHHHHHHHHHHcCC--CCCCCe
Q 011357          307 MGFYYKEHEILPP---LPVGFH-RYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL--PSPPRR  380 (488)
Q Consensus       307 ~~lP~l~G~r~P~---~a~G~~-~l~~~~~~~~~~~g~~~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~--g~~~~~  380 (488)
                      +|+|||.|+|+|.   +++|.| |++.                 .|+++||+||++|||||.++.+++.+.+  +.++++
T Consensus       342 ~~~P~l~G~r~P~~~~~~rg~f~Gl~~-----------------~~~~~~l~rAvlEgia~~~~~~~~~~~~~~g~~~~~  404 (505)
T TIGR01314       342 LFHPYLAGERAPLWNANARGSFFGLTY-----------------SHKKEHMIRAALEGVIYNLYTVALALVEVMGDPLNM  404 (505)
T ss_pred             EEecccccCCCCCCCCCccEEEECCCC-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence            9999999999996   456655 5443                 3599999999999999999999998864  677899


Q ss_pred             EEEecCCcCCHHHHHHHHhHhCCceEeecCCChhHHHHHHHHHhccccccCCCCCCHHHHHHhhcccCCceeeccccCCc
Q 011357          381 IIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGD  460 (488)
Q Consensus       381 i~~~GGga~s~~~~Qi~Advlg~pV~~~~~~e~~alGaA~~A~~~~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~  460 (488)
                      |+++||++||++|+||+|||+|+||++.+..|++++|||++|+++     +|.+++++++ .+ +.+..++|+|++++  
T Consensus       405 i~~~GGga~s~~w~Qi~Adv~g~pv~~~~~~e~~a~GaA~la~~~-----~G~~~~~~~~-~~-~~~~~~~~~P~~~~--  475 (505)
T TIGR01314       405 IQATGGFASSEVWRQMMSDIFEQEIVVPESYESSCLGACILGLKA-----LGLIEDFSEV-ST-MVGTTETHTPIEKN--  475 (505)
T ss_pred             EEEecCcccCHHHHHHHHHHcCCeeEecCCCCcchHHHHHHHHHh-----cCccCCHHHH-HH-hcCCCceECcCHHH--
Confidence            999999999999999999999999999999999999999999999     9999999987 33 56888999999998  


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhcC
Q 011357          461 QQLVSKYAVMMKKRLEIENRLVEKLGR  487 (488)
Q Consensus       461 ~~~~~~Y~~~y~~y~~~~~~l~~~~~~  487 (488)
                         ++.|+++|++|+++|+++++.|++
T Consensus       476 ---~~~Y~~~y~~y~~~~~~~~~~~~~  499 (505)
T TIGR01314       476 ---FEIYREISPIFINLSRSLLAEYEQ  499 (505)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence               999999999999999999999875

Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>PRK09604 UGMP family protein; Validated Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF Back     alignment and domain information
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information
>TIGR03723 bact_gcp putative glycoprotease GCP Back     alignment and domain information
>TIGR03722 arch_KAE1 universal archaeal protein Kae1 Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors [] Back     alignment and domain information
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family Back     alignment and domain information
>PRK00976 hypothetical protein; Provisional Back     alignment and domain information
>PLN02902 pantothenate kinase Back     alignment and domain information
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query488
4bc5_A538 Crystal Structure Of Human D-xylulokinase In Comple 1e-112
4bc2_A538 Crystal Structure Of Human D-xylulokinase In Comple 1e-110
3i8b_A515 The Crystal Structure Of Xylulose Kinase From Bifid 5e-07
3gbt_A504 Crystal Structure Of Gluconate Kinase From Lactobac 5e-06
2itm_A484 Crystal Structure Of The E. Coli Xylulose Kinase Co 2e-05
>pdb|4BC5|A Chain A, Crystal Structure Of Human D-xylulokinase In Complex With Inhibitor 5-deoxy-5-fluoro-d-xylulose Length = 538 Back     alignment and structure 
Iteration: 1

 Score =  403 bits (1035), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/466 (47%), Positives = 296/466 (63%), Gaps = 27/466 (5%)
Query: 22  VTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQCRE 81
           V A+SG+GQQHGS+YWK G+   L+SL P   L  QL D FS  + PVWMDSSTTAQCR+
Sbjct: 91  VLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQ 150
Query: 82  IEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAY 141
           +E AVGGA  LS LTGSR YERFTG QI K++Q  P  Y  TERIS+VSSF ASL +G+Y
Sbjct: 151 LEAAVGGAQALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSY 210
Query: 142 ACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKLAPAHAVAGCIAPYFVERFHF 201
           + ID +D +GMNL+ I+ +VWS+  L A AP LEEKL    P+ +V G I+ Y+V+R+ F
Sbjct: 211 SPIDYSDGSGMNLLQIQDKVWSQACLGACAPHLEEKLSPPVPSCSVVGAISSYYVQRYGF 270
Query: 202 NKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFGITDDPEPRLEGHVFPNPVDT 261
              C VV ++GDNP SLAG+ L   GD+A+SLGTSDT+F    +P P LEGH+F NPVD+
Sbjct: 271 PPGCKVVAFTGDNPASLAGMRLE-EGDIAVSLGTSDTLFLWLQEPMPALEGHIFCNPVDS 329
Query: 262 KGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQTPPLNGGKMGFYYKEHEILPPLP 321
           + YM +L +KN SL RE +RN    +SW  F+K LQ T   NGG +GFY+   EI P + 
Sbjct: 330 QHYMALLCFKNGSLMREKIRNESVSRSWSDFSKALQSTEMGNGGNLGFYFDVMEITPEI- 388
Query: 322 VGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPR-R 380
           +G HR+  EN            +V  F    EVRAL+EGQF++ R HAE  G     + +
Sbjct: 389 IGRHRFNTENH-----------KVAAFPGDVEVRALIEGQFMAKRIHAEGLGYRVMSKTK 437
Query: 381 IIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNM 440
           I+ATGGAS N+ IL  LA ++   +Y +   +SA +G+A RA HG      G+ VP S  
Sbjct: 438 ILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRAFHGL---AGGTDVPFS-- 492
Query: 441 YKDKLEKTSLSCKLAVT--AGDQQLVSKYAVMMKKRLEIENRLVEK 484
              ++ K + + +LA T   G  Q+   Y  ++ +  ++E R++ +
Sbjct: 493 ---EVVKLAPNPRLAATPSPGASQV---YEALLPQYAKLEQRILSQ 532
>pdb|4BC2|A Chain A, Crystal Structure Of Human D-xylulokinase In Complex With D- Xylulose And Adenosine Diphosphate Length = 538 Back     alignment and structure
>pdb|3I8B|A Chain A, The Crystal Structure Of Xylulose Kinase From Bifidobacterium Adolescentis Length = 515 Back     alignment and structure
>pdb|3GBT|A Chain A, Crystal Structure Of Gluconate Kinase From Lactobacillus Acidophilus Length = 504 Back     alignment and structure
>pdb|2ITM|A Chain A, Crystal Structure Of The E. Coli Xylulose Kinase Complexed With Xylulose Length = 484 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query488
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 3e-45
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 5e-43
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 4e-42
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 1e-40
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 1e-38
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 2e-28
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 8e-25
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 4e-24
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 5e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Length = 484 Back     alignment and structure
 Score =  163 bits (416), Expect = 3e-45
 Identities = 84/439 (19%), Positives = 159/439 (36%), Gaps = 66/439 (15%)

Query: 2   WIEALDLMLQKLSKSLDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDA 61
           W +A D  ++ L     L  V A+  +GQ HG+                   L+D     
Sbjct: 48  WWQATDRAMKALGDQHSLQDVKALGIAGQMHGAT------------------LLDAQQRV 89

Query: 62  FSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYD 121
              + + +W D     +C  +E  V  +  +   TG+     FT P++  + + +P ++ 
Sbjct: 90  --LRPAILWNDGRCAQECTLLEARVPQSRVI---TGNLMMPGFTAPKLLWVQRHEPEIFR 144

Query: 122 DTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIRQRVWSKIVLEATAPSLEEKLGKL 181
             +++ +   ++   + G +   D +DAAG   +D+ +R WS ++L+A   S  +++  L
Sbjct: 145 QIDKVLLPKDYLRLRMTGEF-ASDMSDAAGTMWLDVAKRDWSDVMLQACDLS-RDQMPAL 202

Query: 182 APAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSDTVFG 241
                + G + P   + +       VV   GDN     G+ +  +    +SLGTS   F 
Sbjct: 203 YEGSEITGALLPEVAKAWGM-ATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFA 261

Query: 242 ITDDPEPRLEG--HVFPNPVDTKGYMIMLVYKNASLTREDVRNRCAEKSWDVFNKYLQQT 299
           +++    + E   H F + +  + + +M V  +A+   +         +        QQ 
Sbjct: 262 VSEGFLSKPESAVHSFCHALPQR-WHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQA 320

Query: 300 PPLNGGKMGFYYKEHEILPPLPVGFHRYILENFEGE-----------TLDGVNEVEVKEF 348
                                 V F  Y      GE              G+      + 
Sbjct: 321 DESAEP----------------VWFLPY----LSGERTPHNNPQAKGVFFGLT----HQH 356

Query: 349 DPPSEVRALVEGQFLSMRGHAERF-GLPSPPRRIIATGGASANQTILSCLASIYGCDIYT 407
            P    RA++EG   ++    +        P+ +   GG + ++     LA I G  +  
Sbjct: 357 GPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDY 416

Query: 408 VQRPD-SASLGAALRAAHG 425
               D   +LGAA  A   
Sbjct: 417 RTGGDVGPALGAARLAQIA 435
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Length = 504 Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Length = 515 Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Length = 508 Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Length = 511 Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Length = 489 Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Length = 554 Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Length = 482 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query488
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 100.0
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 100.0
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 100.0
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 100.0
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 100.0
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 100.0
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 100.0
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 100.0
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 100.0
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 100.0
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 100.0
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 100.0
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 100.0
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 100.0
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 100.0
2w40_A503 Glycerol kinase, putative; closed conformation, ma 100.0
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 100.0
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 100.0
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 100.0
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 99.38
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 97.76
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 97.64
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 97.57
4b9q_A 605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 97.09
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 97.07
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 97.07
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 97.05
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 96.96
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 96.74
3qbx_A371 Anhydro-N-acetylmuramic acid kinase; acetate and s 96.18
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 96.17
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 96.02
1yuw_A 554 Heat shock cognate 71 kDa protein; chaperone; 2.60 95.83
3cqy_A370 Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1 95.25
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 95.08
2kho_A 605 Heat shock protein 70; molecular chaperone, HSP70, 95.0
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 94.85
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 94.69
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 94.41
3ttc_A657 HYPF, transcriptional regulatory protein; Zn finge 94.14
3vth_A761 Hydrogenase maturation factor; carbamoyltransfer, 94.08
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 93.75
4g9i_A772 Hydrogenase maturation protein HYPF; zinc finger, 92.83
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 91.95
3ven_A 576 O-carbamoyltransferase TOBZ; antibiotic biosynthes 90.33
3en9_A 540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 83.32
2e2o_A299 Hexokinase; acetate and sugar kinases, HSP70, acti 81.4
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
Probab=100.00  E-value=1.2e-90  Score=739.45  Aligned_cols=435  Identities=15%  Similarity=0.169  Sum_probs=400.4

Q ss_pred             CHHHHHHHHHHHHhhc--CCCCCeeEEEEcccccceeeecCCCccccccCCCCCcccccccccCCCCCCccccCCCcHHH
Q 011357            1 MWIEALDLMLQKLSKS--LDLSKVTAVSGSGQQHGSVYWKKGSATILSSLDPKKPLVDQLGDAFSTKESPVWMDSSTTAQ   78 (488)
Q Consensus         1 ~ww~a~~~~~~~l~~~--~~~~~I~aIgis~~~~~~v~~d~~G~p~~~~~d~~~pl~~~~~~~~~~~~~i~W~D~Ra~~~   78 (488)
                      .||++++++++++.++  +++.+|.+|||++|++++|+||++|+|          |          +|+|+|+|+|+.++
T Consensus        54 ~~~~~i~~~i~~~~~~~~~~~~~I~~Igis~~~~~~v~~D~~G~~----------l----------~~~i~W~D~R~~~~  113 (508)
T 3ifr_A           54 QWWDNARAVLAELKTTAGESDWRPGGICVTGMLPAVVLLDDRGAV----------L----------RPSIQQSDGRCGDE  113 (508)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGCCEEEEEEEECSSCBEEECTTSCB----------C----------SCEECTTCCCCHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCChhheEEEEEECCCCcEEEECCCCCC----------c----------ccceeccccChHHH
Confidence            3999999999997653  667899999999999999999999996          7          89999999999999


Q ss_pred             HHHHHHHhCCHHHHHHHhCCCCCCCChHHHHHHHhhhCCchhhhccccccchhhHHHHHhCCccccccchhccccccccC
Q 011357           79 CREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDIR  158 (488)
Q Consensus        79 ~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~~d~s~As~t~l~d~~  158 (488)
                      ++++.+..+ .++++++||+++++.++++||+|+++|+||+|+++++|++++|||.|+|||+.+ +|+|+||+|++||++
T Consensus       114 ~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~l~~~dyl~~~LTG~~~-~d~s~As~t~l~d~~  191 (508)
T 3ifr_A          114 VAELRAEVD-SEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAIATVCGSYDYINMLLTGERV-VDRNWALEGGFIDLA  191 (508)
T ss_dssp             HHHHHHHSC-HHHHHHHHSSCSSTTSHHHHHHHHHHHCHHHHHTCSEEECHHHHHHHHHHCCCC-EEHHHHHHHTCEETT
T ss_pred             HHHHHhhcc-HHHHHHHHCCCCChhhHHHHHHHHHHcCHHHHHHHhhhcCchHHHHHHhcCCcc-ccHhHhhcccCccCc
Confidence            999998865 578999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             CCCccHHHHHHcC-cchHhhcCCcccCCcccccccHHHHHHcCCCCCCeEEeccChhHHhhhccCCCCCCcEEEEecccc
Q 011357          159 QRVWSKIVLEATA-PSLEEKLGKLAPAHAVAGCIAPYFVERFHFNKNCLVVQWSGDNPNSLAGLTLSTSGDLAISLGTSD  237 (488)
Q Consensus       159 ~~~W~~~ll~~~g-~~~~~~LP~i~~~~~~~G~v~~~~A~~~GL~~g~pV~~g~~D~~aa~lg~g~~~~g~~~~s~GTs~  237 (488)
                      +++||+++|+.+| +  +++||+|+++++++|+|++++|+++||++||||++|+||++|+++|+|++++|++++++|||+
T Consensus       192 ~~~W~~~ll~~~gi~--~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~  269 (508)
T 3ifr_A          192 SGTVEADLVALAHIP--PSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVYGGAADHIASALAAGITRPGDVLLKFGGAG  269 (508)
T ss_dssp             TTEECHHHHHTTTSC--GGGSCCEECTTSEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTTEEEEEESSSE
T ss_pred             cCCCCHHHHHHcCCC--HHHCCCCcCCCCeeeccCHHHHHHhCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEechhh
Confidence            9999999999999 7  899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCccccccCccCCCcEEEeeeeechhhHHHHHHHHhc--Cc--cHHHHHHHHhcCCCCCCCeEeEeccC
Q 011357          238 TVFGITDDPEPRLEGHVFPNPVDTKGYMIMLVYKNASLTREDVRNRCA--EK--SWDVFNKYLQQTPPLNGGKMGFYYKE  313 (488)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~w~~~~~~--~~--~~~~l~~~a~~~~~g~~gl~~lP~l~  313 (488)
                      ++.+++++|..++....+++. .+|.|+++++++++|.+++|+++.+.  ..  +|++|++++++++||++|++|+|||+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~gl~flP~~~  348 (508)
T 3ifr_A          270 DIIVASATAKSDPRLYLDYHL-VPGLYAPNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFL  348 (508)
T ss_dssp             EEEECBSCCCCBTTBBCCBCS-STTCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHTSCTTGGGCEEECCTT
T ss_pred             hheeeCCCcccCCCcceeeee-cCCceEEechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhcCCCCCCCeEEecCCC
Confidence            999999988776665567764 48999999999999999999999983  23  69999999999999999999999999


Q ss_pred             CCCCCC---CCCcceeeeecccccccccCcccccccCCChHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCeEEEecCCcC
Q 011357          314 HEILPP---LPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGL-PSPPRRIIATGGASA  389 (488)
Q Consensus       314 G~r~P~---~a~G~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~rAvlEgia~~~r~~~~~l~~-g~~~~~i~~~GGga~  389 (488)
                      |+|+|.   +++|.|            +|++    ..|+++|++||++|||||.+|++++.|++ |.++++|+++||++|
T Consensus       349 Ger~P~~d~~arg~~------------~Gl~----~~~~~~~l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~  412 (508)
T 3ifr_A          349 GEKTPIHDPFASGTF------------TGLS----LSHTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTR  412 (508)
T ss_dssp             CCC----CCCCCCEE------------ESCC----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGG
T ss_pred             CCCCCCCCCCcCEEE------------ECCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCccc
Confidence            999996   466665            3333    34699999999999999999999999987 888999999999999


Q ss_pred             CHHHHHHHHhHhCCceEeecCCChhHHHHHHHHHhccccccCCCCCCHHHHHHhhcccCCceeeccccCCchhhHHHHHH
Q 011357          390 NQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAV  469 (488)
Q Consensus       390 s~~~~Qi~Advlg~pV~~~~~~e~~alGaA~~A~~~~~~~~~G~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~~~Y~~  469 (488)
                      |++||||+||++|+||.++...|++|+|||++|+++     +|.|+|++++.+  +++..++|+|++++     ++.|++
T Consensus       413 s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a-----~G~~~~~~~~~~--~~~~~~~~~P~~~~-----~~~y~~  480 (508)
T 3ifr_A          413 SRVWMGIMADVLQRPVQLLANPLGSAVGAAWVAAIG-----GGDDLGWDDVTA--LVRTGEKITPDPAK-----AEVYDR  480 (508)
T ss_dssp             CHHHHHHHHHHHTSCEEEEECCSTHHHHHHHHHHHH-----TCSSCCGGGGGG--GSEEEEEECCCGGG-----HHHHHH
T ss_pred             CHHHHHHHHHHhCCeEEecCCCCchHHHHHHHHHHH-----hCCCCCHHHHHh--hcCCCeEECcCHHH-----HHHHHH
Confidence            999999999999999999999999999999999999     999999998754  56788899999998     999999


Q ss_pred             HHHHHHHHHHHHHHHhcCC
Q 011357          470 MMKKRLEIENRLVEKLGRR  488 (488)
Q Consensus       470 ~y~~y~~~~~~l~~~~~~~  488 (488)
                      +|++|+++|++++++|+++
T Consensus       481 ~y~~~~~~~~~~~~~~~~~  499 (508)
T 3ifr_A          481 LYRDFSALYATLHPFFHRS  499 (508)
T ss_dssp             HHHHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999864
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis} Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A Back     alignment and structure
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis} Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A* Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 488
d2p3ra1252 c.55.1.4 (A:2-253) Glycerol kinase {Escherichia co 3e-11
d1r59o2235 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus 0.003
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query488
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 100.0
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 100.0
d2p3ra1252 Glycerol kinase {Escherichia coli [TaxId: 562]} 100.0
d1r59o1252 Glycerol kinase {Enterococcus casseliflavus [TaxId 100.0
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 97.29
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 97.16
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 97.09
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 96.89
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 96.12
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 94.4
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 93.67
d2aa4a2170 N-acetylmannosamine kinase NanK {Escherichia coli 88.47
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 87.02
d2gupa2175 Hypothetical protein SP2142 {Streptococcus pneumon 83.87
d2ap1a1186 Putative regulator protein YcfX {Salmonella typhim 83.42
d2hoea2169 N-acetylglucosamine kinase {Thermotoga maritima [T 80.65
d1z05a2197 Transcriptional regulator VC2007 {Vibrio cholerae 80.26
d1xc3a2176 Putative fructokinase YhdR {Bacillus subtilis [Tax 80.25
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1xc3a2 c.55.1.10 (A:119-294) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure