Citrus Sinensis ID: 011407

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480------
MKLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYGQGWNNWL
ccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccEEEcccccEEEEEEccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccHHHHHHHccccccccEEEEEccccccccEEEEEccccccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHHHccccccEEccccccHHHHHHHHcccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccc
ccHHHHHHHEHHHHHHHEEEEcccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHccHHHHHHHHHHHHHHHccccEEccccccEEEEEEccccccEEEEEEcccccccHHcccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHccccccccEEEEEEcccccccEEEEEcccccEcccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccc
MKLQKLSVAFKILSFNLIIIILLQVesltpanndyaffdinslgssttaattpalkpdggsvknrsstsrkpysscevwsRACSKEVMELARRPETVDWLKSVRRTIhqnpelafqEFETSRLLRAELDRMeigykyplaktgirawvgtggppfvalradmdalpiQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQpaeeagngakRMMADGALEDVEAIFAVHVshehptgvigsrpgpllagcGFFHAVIsgkkggaanphrsvdpVLAASAAVISLQGlvsreanpldsQVVSVtyfnggdhldmipDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRcsatvdffdkgntvypptvndedmYEHVKKVAIDllgpmnyrvvppmmgaedfsfysevVPAAFYYIGiknetlgsihtghspyfmidedvlpvGAAVHATIAERFLNEYgqgwnnwl
MKLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTaattpalkpdggsvknrsstsrkpysscevwsraCSKEVMELARRPETVDWLKSVRRTIhqnpelafqefetSRLLRAELDRMEIGYKYplaktgirawVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVsreanpldSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCsatvdffdkgntvypptvndedmyEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLneygqgwnnWL
MKLQKLSVAFKILSFNliiiillQVESLTPANNDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYGQGWNNWL
*****LSVAFKILSFNLIIIILLQVESLTPANNDYAFFDIN**********************************CEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEA*****RMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGA*****SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYGQGWNNW*
******SVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGS******************************************MELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN**********
MKLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTAATTPALK**********************WSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYGQGWNNWL
*KLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSL*************PDGGSVKNRSSTSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG*******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYGQGWNNWL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query486 2.2.26 [Sep-21-2011]
Q8VYX0464 IAA-amino acid hydrolase yes no 0.930 0.974 0.639 1e-170
Q5Z678510 IAA-amino acid hydrolase yes no 0.794 0.756 0.679 1e-157
Q5N8F2456 IAA-amino acid hydrolase no no 0.806 0.859 0.594 1e-139
Q8S9S4442 IAA-amino acid hydrolase no no 0.806 0.886 0.592 1e-137
Q84XG9442 IAA-amino acid hydrolase N/A no 0.806 0.886 0.590 1e-136
O04373440 IAA-amino acid hydrolase no no 0.802 0.886 0.558 1e-132
P54970439 IAA-amino acid hydrolase no no 0.800 0.886 0.561 1e-130
P54969438 IAA-amino acid hydrolase no no 0.796 0.883 0.558 1e-125
Q9SWX9435 IAA-amino acid hydrolase no no 0.804 0.898 0.537 1e-122
P54968442 IAA-amino acid hydrolase no no 0.823 0.904 0.512 1e-121
>sp|Q8VYX0|ILL6_ARATH IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2 Back     alignment and function desciption
 Score =  598 bits (1541), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 307/480 (63%), Positives = 370/480 (77%), Gaps = 28/480 (5%)

Query: 2   KLQKLSVAFKILSFNLIIIILLQV-ESLTPANNDYAFFDINSLGSSTTAATTPALKPDGG 60
           KL  LSV+  I+  +L I   L   E   P NN +                   L+P   
Sbjct: 6   KLNLLSVSLTIIFVSLTIATNLPFFEVKYPNNNPFGML----------------LRPT-- 47

Query: 61  SVKNRSSTSRKPYSS--CEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEF 118
            +KN+S        S  C VW++ACS E++ L  +P+ V WLK VRRTIH+NPELAF+E+
Sbjct: 48  PIKNQSLGLPAHVGSDECRVWTKACSDEILRLTYQPDNVAWLKRVRRTIHENPELAFEEY 107

Query: 119 ETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSK 178
           ETSRL+R+ELDRM I Y+YPLAKTGIRAW+G+GGPPFVA+RADMDALPIQEAVEWE+ SK
Sbjct: 108 ETSRLIRSELDRMGIMYRYPLAKTGIRAWIGSGGPPFVAVRADMDALPIQEAVEWEHISK 167

Query: 179 VAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED 238
           VAGKMHACGHDAHV ML+GAA ILK+REHLLKGTV+L+FQPAEEAGNGAK M+ DGAL+D
Sbjct: 168 VAGKMHACGHDAHVTMLLGAAHILKAREHLLKGTVVLLFQPAEEAGNGAKNMIEDGALDD 227

Query: 239 VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKG-GAANPHRSVDPVLAASAA 297
           VEAIFAVHVSH HPTGVIGSR GPLLAGCG F AVI+ +   GAAN       +LAAS+A
Sbjct: 228 VEAIFAVHVSHIHPTGVIGSRSGPLLAGCGIFRAVITSEDSRGAAN------LLLAASSA 281

Query: 298 VISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIE 357
           VISLQG+VSREA+PLDSQVVSVT F+GG  LD+ PD VV+GGT RAFSN+SFY L +RI+
Sbjct: 282 VISLQGIVSREASPLDSQVVSVTSFDGGHSLDVAPDTVVLGGTFRAFSNSSFYYLKKRIQ 341

Query: 358 EVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMG 417
           EV+++Q  VF C ATV+FF+K N +YPPT N++  Y H+KKV IDLLG  ++ + P MMG
Sbjct: 342 EVLMDQVGVFGCQATVNFFEKQNAIYPPTTNNDATYNHLKKVTIDLLGDSHFTLAPQMMG 401

Query: 418 AEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477
           AEDF+FYSE++PAAFY+IGI+NE LGS+H  HSP+FMIDED LPVGAAVHA +AER+LN+
Sbjct: 402 AEDFAFYSEIIPAAFYFIGIRNEELGSVHIAHSPHFMIDEDSLPVGAAVHAAVAERYLND 461
Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA).
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q5Z678|ILL6_ORYSJ IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1 Back     alignment and function description
>sp|Q5N8F2|ILL2_ORYSJ IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1 Back     alignment and function description
>sp|Q8S9S4|ILL1_ORYSJ IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q84XG9|ILL1_ORYSI IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2 Back     alignment and function description
>sp|P54970|ILL2_ARATH IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2 Back     alignment and function description
>sp|P54969|ILL1_ARATH IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SWX9|ILL5_ARATH IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1 Back     alignment and function description
>sp|P54968|ILR1_ARATH IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query486
255545374474 IAA-amino acid hydrolase ILR1 precursor, 0.860 0.881 0.812 0.0
356515913465 PREDICTED: IAA-amino acid hydrolase ILR1 0.888 0.929 0.791 0.0
224066819477 iaa-amino acid hydrolase 9 [Populus tric 0.962 0.981 0.726 0.0
449464158472 PREDICTED: IAA-amino acid hydrolase ILR1 0.921 0.949 0.748 0.0
269980521462 IAA-amino acid hydrolase [Populus toment 0.901 0.948 0.764 0.0
356509389466 PREDICTED: IAA-amino acid hydrolase ILR1 0.831 0.866 0.826 0.0
357463569476 IAA-amino acid hydrolase ILR1-like prote 0.841 0.859 0.809 0.0
359492536489 PREDICTED: IAA-amino acid hydrolase ILR1 0.921 0.916 0.757 0.0
302141803487 unnamed protein product [Vitis vinifera] 0.921 0.919 0.757 0.0
224082302509 iaa-amino acid hydrolase 8 [Populus tric 0.905 0.864 0.744 0.0
>gi|255545374|ref|XP_002513747.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] gi|223546833|gb|EEF48330.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/421 (81%), Positives = 387/421 (91%), Gaps = 3/421 (0%)

Query: 61  SVKNRSSTSRKPYSS---CEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQE 117
           S KN++S+SR P  S   C+VW+++CS+ V+ LA RPETV WLKSVRR IH+NPELAF+E
Sbjct: 53  SQKNQTSSSRPPKPSTAACDVWTKSCSEAVLSLAWRPETVSWLKSVRRKIHENPELAFEE 112

Query: 118 FETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKS 177
           F+TS L+R ELD+M+I YK+PLAKTGIRAW+GTGGPPFVA+RADMDALPIQEAVEWEYKS
Sbjct: 113 FKTSELVRNELDKMDISYKHPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKS 172

Query: 178 KVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALE 237
           KVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTV+L+FQPAEEAGNGAKRM+ DGALE
Sbjct: 173 KVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALE 232

Query: 238 DVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAA 297
           DVEAIFAVHVSHEH T +IGSRPGPLLAGCGFF AVISGKKGGA +PH SVD +LAASAA
Sbjct: 233 DVEAIFAVHVSHEHRTAMIGSRPGPLLAGCGFFRAVISGKKGGAGSPHHSVDTILAASAA 292

Query: 298 VISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIE 357
           VISLQG+VSRE+NPLDSQVVSVT  +GG+++DMIPD VV+GGT RAFSNTSFYQLL+RI 
Sbjct: 293 VISLQGIVSRESNPLDSQVVSVTTMDGGNNVDMIPDTVVLGGTFRAFSNTSFYQLLRRIN 352

Query: 358 EVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMG 417
           EVIVEQARVFRCSATVDFF++  T+YPPTVN++ MYEHV+KVAIDLLGP N++VVPPMMG
Sbjct: 353 EVIVEQARVFRCSATVDFFEQEYTIYPPTVNNDKMYEHVRKVAIDLLGPANFKVVPPMMG 412

Query: 418 AEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477
           AEDFSFYS+VVPAAFYYIGI+NETLGS HTGHSPYFMIDEDVLP+GAA HATIAER+L E
Sbjct: 413 AEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAAHATIAERYLIE 472

Query: 478 Y 478
           +
Sbjct: 473 H 473

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356515913|ref|XP_003526641.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Glycine max] Back     alignment and taxonomy information
>gi|224066819|ref|XP_002302231.1| iaa-amino acid hydrolase 9 [Populus trichocarpa] gi|222843957|gb|EEE81504.1| iaa-amino acid hydrolase 9 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449464158|ref|XP_004149796.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|269980521|gb|ACZ56435.1| IAA-amino acid hydrolase [Populus tomentosa] Back     alignment and taxonomy information
>gi|356509389|ref|XP_003523432.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Glycine max] Back     alignment and taxonomy information
>gi|357463569|ref|XP_003602066.1| IAA-amino acid hydrolase ILR1-like protein [Medicago truncatula] gi|95106143|gb|ABF55223.1| auxin conjugate hydrolase [Medicago truncatula] gi|355491114|gb|AES72317.1| IAA-amino acid hydrolase ILR1-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|359492536|ref|XP_002284503.2| PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302141803|emb|CBI19006.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224082302|ref|XP_002306640.1| iaa-amino acid hydrolase 8 [Populus trichocarpa] gi|222856089|gb|EEE93636.1| iaa-amino acid hydrolase 8 [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query486
TAIR|locus:2823614464 ILL6 "IAA-leucine resistant (I 0.903 0.946 0.662 1.8e-158
TAIR|locus:2017607440 IAR3 "AT1G51760" [Arabidopsis 0.802 0.886 0.558 9.8e-119
TAIR|locus:2164976439 ILL2 "AT5G56660" [Arabidopsis 0.837 0.927 0.548 2.3e-117
TAIR|locus:2165076438 ILL1 "AT5G56650" [Arabidopsis 0.796 0.883 0.558 1.9e-113
TAIR|locus:2017577435 ILL5 "AT1G51780" [Arabidopsis 0.804 0.898 0.537 4.8e-110
TAIR|locus:2075382442 ILR1 "AT3G02875" [Arabidopsis 0.814 0.895 0.517 1e-109
TAIR|locus:2166557428 ILL3 "AT5G54140" [Arabidopsis 0.783 0.890 0.502 4.9e-101
TIGR_CMR|SPO_2468387 SPO_2468 "amidohydrolase famil 0.736 0.925 0.379 2.2e-57
TIGR_CMR|SPO_2810387 SPO_2810 "amidohydrolase famil 0.757 0.950 0.368 4.9e-53
TIGR_CMR|SPO_2808387 SPO_2808 "amidohydrolase famil 0.746 0.937 0.349 2.1e-52
TAIR|locus:2823614 ILL6 "IAA-leucine resistant (ILR)-like gene 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1544 (548.6 bits), Expect = 1.8e-158, P = 1.8e-158
 Identities = 301/454 (66%), Positives = 364/454 (80%)

Query:    27 SLTPANNDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSS--CEVWSRACS 84
             SLT A N   FF++    ++        L+P    +KN+S        S  C VW++ACS
Sbjct:    20 SLTIATN-LPFFEVKYPNNNPFGML---LRPT--PIKNQSLGLPAHVGSDECRVWTKACS 73

Query:    85 KEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGI 144
              E++ L  +P+ V WLK VRRTIH+NPELAF+E+ETSRL+R+ELDRM I Y+YPLAKTGI
Sbjct:    74 DEILRLTYQPDNVAWLKRVRRTIHENPELAFEEYETSRLIRSELDRMGIMYRYPLAKTGI 133

Query:   145 RAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKS 204
             RAW+G+GGPPFVA+RADMDALPIQEAVEWE+ SKVAGKMHACGHDAHV ML+GAA ILK+
Sbjct:   134 RAWIGSGGPPFVAVRADMDALPIQEAVEWEHISKVAGKMHACGHDAHVTMLLGAAHILKA 193

Query:   205 REHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLL 264
             REHLLKGTV+L+FQPAEEAGNGAK M+ DGAL+DVEAIFAVHVSH HPTGVIGSR GPLL
Sbjct:   194 REHLLKGTVVLLFQPAEEAGNGAKNMIEDGALDDVEAIFAVHVSHIHPTGVIGSRSGPLL 253

Query:   265 AGCGFFHAVISGKKG-GAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFN 323
             AGCG F AVI+ +   GAAN       +LAAS+AVISLQG+VSREA+PLDSQVVSVT F+
Sbjct:   254 AGCGIFRAVITSEDSRGAANL------LLAASSAVISLQGIVSREASPLDSQVVSVTSFD 307

Query:   324 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVY 383
             GG  LD+ PD VV+GGT RAFSN+SFY L +RI+EV+++Q  VF C ATV+FF+K N +Y
Sbjct:   308 GGHSLDVAPDTVVLGGTFRAFSNSSFYYLKKRIQEVLMDQVGVFGCQATVNFFEKQNAIY 367

Query:   384 PPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLG 443
             PPT N++  Y H+KKV IDLLG  ++ + P MMGAEDF+FYSE++PAAFY+IGI+NE LG
Sbjct:   368 PPTTNNDATYNHLKKVTIDLLGDSHFTLAPQMMGAEDFAFYSEIIPAAFYFIGIRNEELG 427

Query:   444 SIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477
             S+H  HSP+FMIDED LPVGAAVHA +AER+LN+
Sbjct:   428 SVHIAHSPHFMIDEDSLPVGAAVHAAVAERYLND 461
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0016787 "hydrolase activity" evidence=IEA
GO:0009850 "auxin metabolic process" evidence=ISS
GO:0010178 "IAA-amino acid conjugate hydrolase activity" evidence=ISS
GO:0010112 "regulation of systemic acquired resistance" evidence=IEP
GO:0009611 "response to wounding" evidence=RCA
GO:0009620 "response to fungus" evidence=RCA
GO:0009694 "jasmonic acid metabolic process" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
TAIR|locus:2017607 IAR3 "AT1G51760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164976 ILL2 "AT5G56660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165076 ILL1 "AT5G56650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017577 ILL5 "AT1G51780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075382 ILR1 "AT3G02875" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166557 ILL3 "AT5G54140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2468 SPO_2468 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2810 SPO_2810 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2808 SPO_2808 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5Z678ILL6_ORYSJ3, ., 5, ., 1, ., -0.67910.79420.7568yesno
Q84XG9ILL1_ORYSI3, ., 5, ., 1, ., -0.59030.80650.8868N/Ano
Q8VYX0ILL6_ARATH3, ., 5, ., 1, ., -0.63950.93000.9741yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query486
PLN02280478 PLN02280, PLN02280, IAA-amino acid hydrolase 0.0
cd08017377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 0.0
cd03886372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 1e-167
PLN02693437 PLN02693, PLN02693, IAA-amino acid hydrolase 1e-166
COG1473392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 1e-141
cd08019372 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoa 1e-139
cd05666373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 1e-131
TIGR01891363 TIGR01891, amidohydrolases, amidohydrolase 1e-127
cd05669372 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoac 1e-120
cd08660363 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1e-117
cd08014372 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylas 1e-104
cd05667402 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylas 1e-103
cd05664398 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylas 5e-99
cd05670367 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoac 8e-85
cd08018365 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoac 9e-64
pfam01546310 pfam01546, Peptidase_M20, Peptidase family M20/M25 2e-57
cd05668374 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylas 7e-54
cd05665415 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Amin 1e-46
cd03887358 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1- 4e-31
cd09849388 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacy 1e-27
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 5e-25
cd05672358 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacyla 1e-23
cd05673434 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacyla 7e-20
COG0624409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 2e-15
cd08659365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 2e-12
TIGR01910375 TIGR01910, DapE-ArgE, acetylornithine deacetylase 6e-07
cd03885363 cd03885, M20_CPDG2, M20 Peptidase Glutamate carbox 2e-05
pfam07687107 pfam07687, M20_dimer, Peptidase dimerisation domai 2e-04
PRK08588377 PRK08588, PRK08588, succinyl-diaminopimelate desuc 7e-04
cd05683366 cd05683, M20_peptT_like, M20 Peptidase T like enzy 0.002
TIGR01892364 TIGR01892, AcOrn-deacetyl, acetylornithine deacety 0.003
PRK08651394 PRK08651, PRK08651, succinyl-diaminopimelate desuc 0.004
>gnl|CDD|215158 PLN02280, PLN02280, IAA-amino acid hydrolase Back     alignment and domain information 
 Score =  813 bits (2100), Expect = 0.0
 Identities = 347/481 (72%), Positives = 405/481 (84%), Gaps = 10/481 (2%)

Query: 3   LQKLSVAFKILSFNLIIIILLQVESLTPANN-DYAFFDINSLGSSTTAATTPALKPDGGS 61
           L+ L++    L+ + + + +    S + A+    +FF++     ++       L+    S
Sbjct: 4   LRNLNLLSLSLTISFVSLTISSSSSSSDADPPSLSFFEVKYPNVNSFG---MLLRN---S 57

Query: 62  VKNRSSTSRKPYSS---CEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEF 118
            K   S+      S   CEVW++ACS+ V+ LA +P+TV WLKSVRR IH+NPELAF+E+
Sbjct: 58  PKKNQSSGLPAKPSSDECEVWTKACSEAVLRLAYQPDTVAWLKSVRRKIHENPELAFEEY 117

Query: 119 ETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSK 178
           +TS L+R+ELDRM I Y+YPLAKTGIRAW+GTGGPPFVA+RADMDALPIQEAVEWE+KSK
Sbjct: 118 KTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSK 177

Query: 179 VAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED 238
           VAGKMHACGHDAHVAML+GAAKILKSREHLLKGTV+L+FQPAEEAGNGAKRM+ DGAL+D
Sbjct: 178 VAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDD 237

Query: 239 VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAV 298
           VEAIFAVHVSHEHPT VIGSRPGPLLAGCGFF AVISGKKG A +PH SVD +LAASAAV
Sbjct: 238 VEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAV 297

Query: 299 ISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEE 358
           ISLQG+VSREANPLDSQVVSVT  +GG++LDMIPD VV+GGT RAFSNTSFYQLL+RI+E
Sbjct: 298 ISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQE 357

Query: 359 VIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGA 418
           VIVEQA VFRCSATVDFF+K NT+YPPTVN++ MYEHV+KVAIDLLGP N+ VVPPMMGA
Sbjct: 358 VIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGA 417

Query: 419 EDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 478
           EDFSFYS+VVPAAFYYIGI+NETLGS HTGHSPYFMIDEDVLP+GAAVHA IAER+L E+
Sbjct: 418 EDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIEH 477

Query: 479 G 479
            
Sbjct: 478 S 478

Length = 478
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|178296 PLN02693, PLN02693, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|193566 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|193545 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2 Back     alignment and domain information
>gnl|CDD|193571 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1-like family Back     alignment and domain information
>gnl|CDD|193562 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193543 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193540 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193546 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins Back     alignment and domain information
>gnl|CDD|193565 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoacylase 1 amhX_like subfamily Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|193544 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193541 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase from bacteria and archaea Back     alignment and domain information
>gnl|CDD|193508 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193573 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|193547 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacylase 1-like protein 2-like, amidohydrolase subfamily Back     alignment and domain information
>gnl|CDD|193548 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|233632 TIGR01910, DapE-ArgE, acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|193506 cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme Back     alignment and domain information
>gnl|CDD|219515 pfam07687, M20_dimer, Peptidase dimerisation domain Back     alignment and domain information
>gnl|CDD|181490 PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|193558 cd05683, M20_peptT_like, M20 Peptidase T like enzymes specifically cleave tripeptides Back     alignment and domain information
>gnl|CDD|130947 TIGR01892, AcOrn-deacetyl, acetylornithine deacetylase (ArgE) Back     alignment and domain information
>gnl|CDD|236323 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 486
PLN02280478 IAA-amino acid hydrolase 100.0
PLN02693437 IAA-amino acid hydrolase 100.0
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
PRK06915422 acetylornithine deacetylase; Validated 100.0
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR01891363 amidohydrolases amidohydrolase. This model represe 100.0
PRK07338402 hypothetical protein; Provisional 100.0
PRK06837427 acetylornithine deacetylase; Provisional 100.0
PRK06133410 glutamate carboxypeptidase; Reviewed 100.0
PRK13004399 peptidase; Reviewed 100.0
PRK08596421 acetylornithine deacetylase; Validated 100.0
PRK13983400 diaminopimelate aminotransferase; Provisional 100.0
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 100.0
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 100.0
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 100.0
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 100.0
PRK05111383 acetylornithine deacetylase; Provisional 100.0
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06446436 hypothetical protein; Provisional 100.0
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 100.0
PRK09133472 hypothetical protein; Provisional 100.0
PRK07907449 hypothetical protein; Provisional 100.0
PRK08201456 hypothetical protein; Provisional 100.0
PRK07522385 acetylornithine deacetylase; Provisional 100.0
PRK00466346 acetyl-lysine deacetylase; Validated 100.0
PRK09104464 hypothetical protein; Validated 100.0
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 100.0
PRK07473376 carboxypeptidase; Provisional 100.0
PRK08262486 hypothetical protein; Provisional 100.0
PRK08652347 acetylornithine deacetylase; Provisional 100.0
PRK07079469 hypothetical protein; Provisional 100.0
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR01883361 PepT-like peptidase T-like protein. This model rep 100.0
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 100.0
PRK04443348 acetyl-lysine deacetylase; Provisional 100.0
PRK13381404 peptidase T; Provisional 100.0
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 100.0
PRK07906426 hypothetical protein; Provisional 100.0
PRK08737364 acetylornithine deacetylase; Provisional 100.0
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 100.0
PRK12892412 allantoate amidohydrolase; Reviewed 100.0
PRK05469408 peptidase T; Provisional 100.0
PRK07318466 dipeptidase PepV; Reviewed 100.0
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 100.0
PRK07205444 hypothetical protein; Provisional 100.0
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 100.0
PRK09290413 allantoate amidohydrolase; Reviewed 100.0
PRK12893412 allantoate amidohydrolase; Reviewed 100.0
PRK06156520 hypothetical protein; Provisional 100.0
PRK12891414 allantoate amidohydrolase; Reviewed 100.0
TIGR01882410 peptidase-T peptidase T. This model represents a t 100.0
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 100.0
PRK12890414 allantoate amidohydrolase; Reviewed 100.0
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 100.0
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 100.0
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 100.0
PRK08554438 peptidase; Reviewed 100.0
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 100.0
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 100.0
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 100.0
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 100.0
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.9
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 99.87
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 99.68
COG4187 553 RocB Arginine degradation protein (predicted deacy 99.67
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.62
PRK09961344 exoaminopeptidase; Provisional 99.54
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.45
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 99.33
PRK09864356 putative peptidase; Provisional 99.32
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 99.28
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 98.0
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 97.87
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 96.59
COG2234435 Iap Predicted aminopeptidases [General function pr 95.58
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 95.36
KOG2195702 consensus Transferrin receptor and related protein 94.93
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 94.48
KOG2526555 consensus Predicted aminopeptidases - M20/M25/M40 94.2
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 93.32
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 89.99
PRK00913483 multifunctional aminopeptidase A; Provisional 89.8
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 87.67
PTZ00412569 leucyl aminopeptidase; Provisional 86.41
PRK05015424 aminopeptidase B; Provisional 81.69
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-64  Score=531.19  Aligned_cols=417  Identities=82%  Similarity=1.295  Sum_probs=363.7

Q ss_pred             cccCCCCC-CCCc-ccccccchhhHHHHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC
Q 011407           62 VKNRSSTS-RKPY-SSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL  139 (486)
Q Consensus        62 ~~~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~  139 (486)
                      .+||+.+. .++. +.|+||...|+++|.-...+++..+++.++.|.++++|+++++|.++++||+++|+++||+++...
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~  138 (478)
T PLN02280         59 KKNQSSGLPAKPSSDECEVWTKACSEAVLRLAYQPDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPL  138 (478)
T ss_pred             cccccCCCCCCCCCchhhHhhhhhhHHHHHhhhhHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecC
Confidence            34555543 3455 699999999999988776668889999999999999999999999999999999999999988766


Q ss_pred             CCceEEEEEcCCCCcEEEEEeccCcccCcCCCCCcccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeec
Q 011407          140 AKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQP  219 (486)
Q Consensus       140 ~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~  219 (486)
                      .++|+++++|++++|+|+|+||+||||+++...|+|+|+++|++||||++++++++++++++|++.+.+++++|.|+|++
T Consensus       139 ~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~p  218 (478)
T PLN02280        139 AKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQP  218 (478)
T ss_pred             CCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecc
Confidence            68899999965445899999999999998888899999999999999999999999999999998887889999999999


Q ss_pred             CCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHH
Q 011407          220 AEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVI  299 (486)
Q Consensus       220 dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~  299 (486)
                      |||.|.|++.|+++|.++++|++++.|+.+.+|.+.++.+.+..++|..+++|+++|+++|++.|+.|+||+..+++++.
T Consensus       219 dEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~  298 (478)
T PLN02280        219 AEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVI  298 (478)
T ss_pred             cccccchHHHHHHCCCCcCCCEEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHH
Confidence            99997799999999999889999999987777888777777777779999999999999999999999999999999999


Q ss_pred             HHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCC
Q 011407          300 SLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKG  379 (486)
Q Consensus       300 ~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~  379 (486)
                      +|+++..+...+....+++++.|+||.+.|+||++|++.+|+|++|+++.+++.++|+++++..+..+++++++++....
T Consensus       299 ~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~  378 (478)
T PLN02280        299 SLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQ  378 (478)
T ss_pred             HHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccc
Confidence            99988655555556678999999999999999999999999999999999999999999999988888888887763211


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccCCCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCc
Q 011407          380 NTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDV  459 (486)
Q Consensus       380 ~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~  459 (486)
                      ...++++.+++++++.++++..+++|.+......+..|++|+++|.+.+|++++++|+++..++....+|+++|++++++
T Consensus       379 ~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~  458 (478)
T PLN02280        379 NTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDV  458 (478)
T ss_pred             cCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHH
Confidence            24577888899999999999988777653222345688999999998899998888987643333457999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhc
Q 011407          460 LPVGAAVHATIAERFLNEY  478 (486)
Q Consensus       460 l~~~~~i~~~~i~~~l~~~  478 (486)
                      |..++++|+.++.+|+.+|
T Consensus       459 L~~~~~~~~~~~~~~l~~~  477 (478)
T PLN02280        459 LPIGAAVHAAIAERYLIEH  477 (478)
T ss_pred             HHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999865

>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PRK00913 multifunctional aminopeptidase A; Provisional Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query486
1xmb_A418 X-ray Structure Of Iaa-aminoacid Hydrolase From Ara 1e-131
1ysj_A404 Crystal Structure Of Bacillus Subtilis Yxep Protein 3e-59
4ewt_A392 The Crystal Structure Of A Putative Aminohydrolase 5e-53
3io1_A445 Crystal Structure Of Aminobenzoyl-Glutamate Utiliza 8e-13
3ram_A394 Crystal Structure Of Hmra Length = 394 2e-06
>pdb|1XMB|A Chain A, X-ray Structure Of Iaa-aminoacid Hydrolase From Arabidopsis Thaliana Gene At5g56660 Length = 418 Back     alignment and structure 
Iteration: 1

 Score =  464 bits (1194), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/392 (56%), Positives = 295/392 (75%), Gaps = 3/392 (0%)
Query: 86  EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIR 145
           +++E A+ PE  DW+  +RR IH+NPEL ++E ETS+L+R+EL+ + I Y+YP+A TG+ 
Sbjct: 16  KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVI 75
Query: 146 AWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSR 205
            ++GTG PPFVALRADMDALPIQE VEWE+KSK+AGKMHACGHD HV ML+GAAKIL   
Sbjct: 76  GYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 135
Query: 206 EHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLA 265
            H L+GTV+LIFQPAEE  +GAK+M  +GAL++VEAIF +H+S   P G   SR G  LA
Sbjct: 136 RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLA 195
Query: 266 GCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG 325
           G G F AVI+GK G AA P  ++DPV+AAS+ V+SLQ LVSRE +PLDS+VV+V+  NGG
Sbjct: 196 GAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGG 255
Query: 326 DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP 385
           +  ++IPD++ IGGTLRAF  T F QL QR++EVI +QA V RC+A+V+    G    PP
Sbjct: 256 NAFNVIPDSITIGGTLRAF--TGFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPP 313
Query: 386 TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSI 445
           TVN++D+Y+  KKV  DLLG   +    P+MG+EDFS+++E +P  F  +G+++ET G  
Sbjct: 314 TVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNGYA 373
Query: 446 HTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477
            + HSP + I+EDVLP GAA+HA++A ++L E
Sbjct: 374 -SSHSPLYRINEDVLPYGAAIHASMAVQYLKE 404
>pdb|1YSJ|A Chain A, Crystal Structure Of Bacillus Subtilis Yxep Protein (Apc1829), A Dinuclear Metal Binding Peptidase From M20 Family Length = 404 Back     alignment and structure
>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From Methicillin Resistant Staphylococcus Aureus Length = 392 Back     alignment and structure
>pdb|3IO1|A Chain A, Crystal Structure Of Aminobenzoyl-Glutamate Utilization Protein From Klebsiella Pneumoniae Length = 445 Back     alignment and structure
>pdb|3RAM|A Chain A, Crystal Structure Of Hmra Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query486
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 0.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 1e-172
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 1e-141
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 4e-32
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 3e-18
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 4e-11
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 1e-07
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 1e-06
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 2e-06
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 2e-05
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 4e-05
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 2e-04
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 2e-04
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 3e-04
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
 Score =  595 bits (1537), Expect = 0.0
 Identities = 221/409 (54%), Positives = 300/409 (73%), Gaps = 5/409 (1%)

Query: 69  SRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAEL 128
           S  P+ + +  +     +++E A+ PE  DW+  +RR IH+NPEL ++E ETS+L+R+EL
Sbjct: 1   SESPWIAED--TSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSEL 58

Query: 129 DRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGH 188
           + + I Y+YP+A TG+  ++GTG PPFVALRADMDALPIQE VEWE+KSK+AGKMHACGH
Sbjct: 59  ELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGH 118

Query: 189 DAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVS 248
           D HV ML+GAAKIL    H L+GTV+LIFQPAEE  +GAK+M  +GAL++VEAIF +H+S
Sbjct: 119 DGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLS 178

Query: 249 HEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE 308
              P G   SR G  LAG G F AVI+GK G AA P  ++DPV+AAS+ V+SLQ LVSRE
Sbjct: 179 ARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRE 238

Query: 309 ANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFR 368
            +PLDS+VV+V+  NGG+  ++IPD++ IGGTLRAF+   F QL QR++EVI +QA V R
Sbjct: 239 TDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHR 296

Query: 369 CSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVV 428
           C+A+V+    G    PPTVN++D+Y+  KKV  DLLG   +    P+MG+EDFS+++E +
Sbjct: 297 CNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETI 356

Query: 429 PAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 477
           P  F  +G+++ET G     HSP + I+EDVLP GAA+HA++A ++L E
Sbjct: 357 PGHFSLLGMQDETNGYAS-SHSPLYRINEDVLPYGAAIHASMAVQYLKE 404
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Length = 394 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364 Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Length = 434 Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Length = 373 Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198 Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Length = 417 Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Length = 369 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query486
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 100.0
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 100.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 100.0
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 100.0
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 100.0
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 100.0
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 100.0
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 100.0
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 100.0
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 100.0
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 100.0
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 100.0
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 100.0
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 100.0
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 100.0
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 100.0
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 100.0
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 100.0
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 100.0
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 100.0
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 100.0
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 100.0
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 100.0
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 100.0
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 100.0
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 100.0
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 100.0
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 100.0
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 99.97
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 99.93
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 99.92
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 99.89
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 99.88
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.87
2gre_A349 Deblocking aminopeptidase; structural genomi prote 99.87
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 99.85
1vho_A346 Endoglucanase; structural genomics, unknown functi 99.84
1ylo_A348 Hypothetical protein SF2450; structural genomics, 99.81
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 99.8
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.67
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.6
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 99.6
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 99.51
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 99.48
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 99.44
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 99.43
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 99.4
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 99.1
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 99.1
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 99.04
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 99.03
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 98.86
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.48
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 98.41
3kas_A640 Transferrin receptor protein 1; transferrin recept 97.74
3fed_A707 Glutamate carboxypeptidase III; metallopeptidase, 97.7
3k9t_A435 Putative peptidase; structural genomics, joint cen 87.17
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 86.35
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 84.74
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 84.39
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
Probab=100.00  E-value=7.2e-60  Score=494.71  Aligned_cols=379  Identities=25%  Similarity=0.377  Sum_probs=307.6

Q ss_pred             HHHHHhcCcchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecC--------------------------
Q 011407           86 EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL--------------------------  139 (486)
Q Consensus        86 ~i~~~~~~~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~--------------------------  139 (486)
                      +|.+++  +++++++++++|+|+++||++++|.++++||+++|+++||+++...                          
T Consensus         4 ~~~~~~--~~~~~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (445)
T 3io1_A            4 QLDEYL--RQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERARE   81 (445)
T ss_dssp             CHHHHH--HTTHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHT
T ss_pred             hHHHHH--HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcc
Confidence            567788  8899999999999999999999999999999999999999987642                          


Q ss_pred             -------------CCceEEEEEcCC-CCcEEEEEeccCcccCcCCCCCcccc-------cCCCeeeecCchHHHHHHHHH
Q 011407          140 -------------AKTGIRAWVGTG-GPPFVALRADMDALPIQEAVEWEYKS-------KVAGKMHACGHDAHVAMLIGA  198 (486)
Q Consensus       140 -------------~~~nvia~~g~~-~~~~ill~gH~DtVP~~~~~~~p~~~-------~~dG~l~GrG~~g~~a~~l~a  198 (486)
                                   +++||+|+++++ ++|+|+|+|||||||+++.+.|+++|       +.+|++|||||+++++++|+|
T Consensus        82 ~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~a  161 (445)
T 3io1_A           82 QGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGL  161 (445)
T ss_dssp             TTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHH
T ss_pred             ccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHH
Confidence                         579999999654 57999999999999998877775443       457999999999999999999


Q ss_pred             HHHHHhcCCCCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCCCceeEEeccCcccceeeEEEEEEEeec
Q 011407          199 AKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKK  278 (486)
Q Consensus       199 a~~L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~i~~~~G~~~ag~~~~~i~v~G~~  278 (486)
                      +++|++.+.+++++|.|+|+++||.+.|++.|+++|.++++|++++.|+++..|.|.+.+..+..+ +..+++|+++|++
T Consensus       162 a~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~-a~~~~~i~v~Gk~  240 (445)
T 3io1_A          162 AHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFM-ATTKFDVQFSGVA  240 (445)
T ss_dssp             HHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBC-EEEEEEEEEECCC
T ss_pred             HHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCee-EEEEEEEEEEeec
Confidence            999999888899999999999999767999999999998999999999876667787776555443 3468999999999


Q ss_pred             CCC-CCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccCeEEEEEEEeCCChhhHHHHHHHHH
Q 011407          279 GGA-ANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIE  357 (486)
Q Consensus       279 ~Ha-~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~v~~~i~  357 (486)
                      +|+ +.|+.|+||+..+++++.+|+.+. +...  +..+++++.|+||.+.|+||++|++.+++|+.+.++.+++.++|+
T Consensus       241 ~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~  317 (445)
T 3io1_A          241 AHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQ  317 (445)
T ss_dssp             SSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHH
Confidence            999 579999999999999999999873 2222  347899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccc-cCCCcccchHHHHHhhcC-----cc
Q 011407          358 EVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRV-VPPMMGAEDFSFYSEVVP-----AA  431 (486)
Q Consensus       358 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~-~~~~~g~tD~~~~~~~~p-----~~  431 (486)
                      ++++..+..+++++++++.    ..++++.+|+++++.+++++++++|.++... ...++|++|+++|++.+|     .+
T Consensus       318 ~~~~~~a~~~g~~~~i~~~----~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~~  393 (445)
T 3io1_A          318 HVVAGAAAMYEARYELRMM----GAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMARVQARGGLAS  393 (445)
T ss_dssp             HHHHHHHHHTTCEEEEEEE----EEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHHHhCCeEEEEEe----cCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHHHhcccCCceE
Confidence            9999999889999998876    3567788899999999999999877654321 233589999999998776     56


Q ss_pred             EEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhcc
Q 011407          432 FYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG  479 (486)
Q Consensus       432 ~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~~  479 (486)
                      ++++|++..     ..+|+++|++++++|..++++|+.++.+|+.+++
T Consensus       394 ~~~~G~~~~-----~~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~~  436 (445)
T 3io1_A          394 YMIFGTELS-----AGHHNEKFDFDESVMAVAVETLARVALNFPWQRG  436 (445)
T ss_dssp             EEEEEEEC----------------CCCHHHHHHHHHHHHHHTCCSCC-
T ss_pred             EEEEeCCCC-----CCCCCCCCcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence            677898753     3699999999999999999999999999998763
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 486
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 8e-52
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 6e-21
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 2e-40
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 1e-13
d1xmba2119 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mo 1e-21
d1lfwa2196 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactoba 9e-16
d1ysja2115 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subti 3e-14
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 1e-12
d1z2la2117 d.58.19.1 (A:213-329) Allantoate amidohydrolase Al 2e-10
d1vgya2113 d.58.19.1 (A:181-293) Succinyl-diaminopimelate des 1e-09
d1cg2a2113 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudom 2e-09
d1r3na2116 d.58.19.1 (A:248-363) Peptidase-like beta-alanine 1e-05
d1vgya1262 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimel 0.003
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  174 bits (442), Expect = 8e-52
 Identities = 117/262 (44%), Positives = 158/262 (60%), Gaps = 5/262 (1%)

Query: 86  EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIR 145
           +++E A+ PE  DW+  +RR IH+NPEL ++E ETS+L+R+EL+ + I Y+YP+A TG+ 
Sbjct: 1   KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVI 60

Query: 146 AWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSR 205
            ++GTG PPFVALRADMDALPIQE VEWE+KSK+AGKMHACGHD HV ML+GAAKIL   
Sbjct: 61  GYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 120

Query: 206 EHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLA 265
            H L+GTV+LIFQPAEE  +GAK+M  +GAL++VEAIF +H+S   P G   SR G  L 
Sbjct: 121 RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLT 180

Query: 266 GCGFFHAVISGKKG---GAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSV-TY 321
                      K               PV+ +       +  +    + L  Q  +    
Sbjct: 181 VNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAE-TIPGHFSLLGMQDETNGYA 239

Query: 322 FNGGDHLDMIPDAVVIGGTLRA 343
            +      +  D +  G  + A
Sbjct: 240 SSHSPLYRINEDVLPYGAAIHA 261
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 196 Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 115 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Length = 113 Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 113 Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 116 Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Length = 262 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query486
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 100.0
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 100.0
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 99.97
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 99.96
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.92
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.89
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.85
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.84
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 99.83
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.8
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.8
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.79
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 99.75
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 99.75
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.74
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.73
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.68
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.67
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.65
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 99.55
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.45
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 99.37
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 99.19
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 99.0
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 98.9
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 98.77
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.03
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 97.62
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 97.56
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 94.25
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-38  Score=307.00  Aligned_cols=264  Identities=56%  Similarity=0.980  Sum_probs=210.2

Q ss_pred             cchHHHHHHHHHHhhhCCCCCCChHHHHHHHHHHHHhCCCceEecCCCceEEEEEcCCCCcEEEEEeccCcccCcCCCCC
Q 011407           94 PETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEW  173 (486)
Q Consensus        94 ~~~~~~l~~ll~~lv~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~nvia~~g~~~~~~ill~gH~DtVP~~~~~~~  173 (486)
                      +++.++++++.|+||++|+++++|.++++||+++|+++|++++...+++++++.++++++|+|+|.++||++|..+.+.+
T Consensus         9 ~e~~~~li~~rr~lh~~PEl~~~E~~T~~~i~~~L~~~g~~~~~~~~~tg~~a~~~~~~~~~i~~rad~Dalp~~e~~~~   88 (273)
T d1xmba1           9 PEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEW   88 (273)
T ss_dssp             -------------HHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECCCBSCCCCCCS
T ss_pred             hHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHHCCCeEEecCCceEEEEEECCCcceEEEEeccccccccccccCc
Confidence            77899999999999999999999999999999999999999987777899999998777799999999999999999999


Q ss_pred             cccccCCCeeeecCchHHHHHHHHHHHHHHhcCCCCCceEEEEeecCCCCcCcHHHHHHcCCCccccEEEEEecCCCCCc
Q 011407          174 EYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPT  253 (486)
Q Consensus       174 p~~~~~dG~l~GrG~~g~~a~~l~aa~~L~~~g~~l~~~I~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~  253 (486)
                      ||.+..+|++|+||||++++++|++++.|++...+++++|+|+|+|+||.++|++.|+++|.++++|+++.+|+.+..|.
T Consensus        89 ~~~s~~~g~~HaCGHd~h~a~~l~aa~~l~~~~~~~~g~v~~ifqPaEE~~~Ga~~mi~~G~~~~vd~~~~~H~~~~~~~  168 (273)
T d1xmba1          89 EHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPF  168 (273)
T ss_dssp             TTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEEEEEEEEEEEET
T ss_pred             ccccCCCCcccccccchHHHHHHHHHHHHHHhhhcCCCeEEEEEecccccccchhHHHHcCCcCCCCeeEEEeecCCCCc
Confidence            99999999999999999999999999999998888999999999999999999999999999999999999999888888


Q ss_pred             eeEEeccCcccceeeEEEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHhhhhcccCCCCCeEEEEEEEecCccCccccC
Q 011407          254 GVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPD  333 (486)
Q Consensus       254 g~i~~~~G~~~ag~~~~~i~v~G~~~Ha~~p~~G~nAi~~a~~~i~~L~~l~~~~~~~~~~~~~~v~~i~gG~~~nvIP~  333 (486)
                      |.+.++.|..++..                                                                  
T Consensus       169 G~i~~~~G~~ma~n------------------------------------------------------------------  182 (273)
T d1xmba1         169 GKAASRAGSFLTVN------------------------------------------------------------------  182 (273)
T ss_dssp             TCEEECSEEEEE--------------------------------------------------------------------
T ss_pred             chhhcccchhhhhh------------------------------------------------------------------
Confidence            88877665432110                                                                  


Q ss_pred             eEEEEEEEeCCChhhHHHHHHHHHHHHHHHHhhcCceeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCcccccC
Q 011407          334 AVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVP  413 (486)
Q Consensus       334 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~~~v~~l~~a~~~~~G~~~~~~~~  413 (486)
                                                                             |...++.+.++..+.+|.+......
T Consensus       183 -------------------------------------------------------d~~~~~~~~~~a~~~~G~~av~~~~  207 (273)
T d1xmba1         183 -------------------------------------------------------NKDLYKQFKKVVRDLLGQEAFVEAA  207 (273)
T ss_dssp             -----------------------------------------------------------------------ECGGEEECC
T ss_pred             -------------------------------------------------------hhHhHHHHHHHHHHHhccccccccC
Confidence                                                                   1111222333344445555443456


Q ss_pred             CCcccchHHHHHhhcCccEEEEccccCCCCCCCCCCCCCCcCCCCchHHHHHHHHHHHHHHHhhcc
Q 011407          414 PMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG  479 (486)
Q Consensus       414 ~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~i~i~~l~~~~~i~~~~i~~~l~~~~  479 (486)
                      +..|+.||+++.+.+|.+++++|.++...+ ....|++.+.++.+.+..|+++++.++.+||+++.
T Consensus       208 P~mgsEDFs~~~~~vPg~~~~lG~~~~~~g-~~~~Hsp~F~idE~aL~~Gv~~~~~~Al~~L~e~a  272 (273)
T d1xmba1         208 PVMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKA  272 (273)
T ss_dssp             CBCCCCTHHHHHTTSCEEEEEEEEECTTCC-SCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHhCCceEEEEccccCCCC-CcCCCCCCccCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence            778999999999999999999998876433 34699999999999999999999999999998763
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure